BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003974
(782 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225441510|ref|XP_002275932.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Vitis
vinifera]
Length = 829
Score = 1035 bits (2676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/767 (65%), Positives = 607/767 (79%), Gaps = 34/767 (4%)
Query: 48 EEPVELVTRVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALN------------- 94
EE L V KKT+K++ ++ V P+S +EA +++P RY + N
Sbjct: 9 EEAAPLQPCVVKKTKKSRAAAEASVVGAPISVNEARQKWPQRYISTNKFRKGSDSRTKDE 68
Query: 95 --EEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKA 152
E E++LQAR H+T+A VDGC+Y L D AYVKAE+G D+IA+IVELFE++D EPYF A
Sbjct: 69 SIEAEDILQARRHFTEAVVDGCIYKLYDYAYVKAEDGQPDFIAKIVELFETIDREPYFTA 128
Query: 153 RWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIP 212
+WF+RAEDTVIKD A LVD+KRVF SD+ DDNPL+CIVSK +I +VA N+DL K+K IP
Sbjct: 129 QWFFRAEDTVIKDHAHLVDQKRVFYSDMRDDNPLDCIVSKVEIVQVAPNVDLAEKEKTIP 188
Query: 213 PCDLYYDMKYTLPHLTFLNINNESNRRDSDASSTISSETG-------SNSPIGQPE---- 261
PCDLYYDM Y+L HLTF N+ E++R +SD SSTISSE G NS IG+
Sbjct: 189 PCDLYYDMSYSLKHLTFANLLTENSRTESDESSTISSEIGLNSTTDGINSAIGESSQVHK 248
Query: 262 -----MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
M+LLDLYSGCGAMSTGLC+GASLSG+KLVTRWA+DINPHAC+SLK NHPET+VRN
Sbjct: 249 FQGSGMTLLDLYSGCGAMSTGLCLGASLSGLKLVTRWAVDINPHACESLKLNHPETEVRN 308
Query: 317 EAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEE 376
EAA+DFLSLLKEWA LC+ FS+ + + PE +N +S ++EE+ + DD + VP E
Sbjct: 309 EAAEDFLSLLKEWATLCEDFSLLGSRR-PE-VVNPISNRSGSDDEEDADGDDGSPVPRGE 366
Query: 377 FEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYR 436
FEV++L+A+CYGDPN+ KPG+YFKVRWKGYGPS+DTWEPI+GLSKCK+ +KEFV KGYR
Sbjct: 367 FEVKKLVAICYGDPNEINKPGLYFKVRWKGYGPSDDTWEPIEGLSKCKKSVKEFVKKGYR 426
Query: 437 SNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLM 496
S+ILPLPGDVDFICGGPPCQGVSGFNRFRN +A L+D KN QL+VFMD++ YLKPKYVLM
Sbjct: 427 SSILPLPGDVDFICGGPPCQGVSGFNRFRNTEAPLDDPKNHQLVVFMDIVNYLKPKYVLM 486
Query: 497 ENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP 556
ENVVDILKF+GGFL RYA+GRLVSM+YQ RLG+MAAGSYG+PQ+R+RVFLWGA P +KLP
Sbjct: 487 ENVVDILKFAGGFLGRYAMGRLVSMNYQARLGMMAAGSYGVPQYRMRVFLWGAHPMEKLP 546
Query: 557 QYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERK 616
YPLPTH+++ RGV+PNEF+EI V Y ++ C+LEK + L DAISDLP VTN +DE
Sbjct: 547 PYPLPTHDVIGRGVVPNEFEEITVGYDKSELCKLEKALFLGDAISDLPPVTNYNGQDEMP 606
Query: 617 YGTVARTEFQKYIRLRRHDVVNLSSAQM-ASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
Y A TEFQ+YIRLR+HD+V S A+ AS P +LYDHRP Q+N DD ERVC IPK+KG
Sbjct: 607 YNKAAHTEFQRYIRLRKHDMVYCSDAEKDASEPPMLYDHRPLQLNEDDNERVCRIPKKKG 666
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIV 735
ANFRDLPGV+VG DN+V WDPSMERV+L SGKPLVPDYAM F STKPF RLWWDEIV
Sbjct: 667 ANFRDLPGVMVGSDNRVEWDPSMERVLLPSGKPLVPDYAMSFVRGKSTKPFARLWWDEIV 726
Query: 736 NTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
TVVTRA+PHN+ ++HP+QDRVLTIRENAR QGFPDCY+L GPVKER
Sbjct: 727 ATVVTRAEPHNQAIIHPTQDRVLTIRENARFQGFPDCYKLCGPVKER 773
>gi|255579031|ref|XP_002530367.1| protein with unknown function [Ricinus communis]
gi|223530114|gb|EEF32028.1| protein with unknown function [Ricinus communis]
Length = 845
Score = 1033 bits (2672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/793 (63%), Positives = 620/793 (78%), Gaps = 40/793 (5%)
Query: 30 AEQQHQQQEEQREDEEV---KEEPVELVTRVKKKTQKNKPDSDLFFVSPPVSADEALKRY 86
A++ +++ E + ED ++ P+ L++ K+T+K K D+DL F+ P+SA EA K++
Sbjct: 5 AKRPNREPEVEEEDGATLSDQKGPITLLSARPKETKKAKLDADLSFIGNPISATEARKKW 64
Query: 87 PDRYKA---------------LNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAV 131
P RYK+ L+++++V QA+CHY QA VDG LY+LGDDAYVKAE+G
Sbjct: 65 PQRYKSQISKVKNGSEPQNGVLSKDDDVTQAKCHYKQAMVDGILYDLGDDAYVKAEDGKP 124
Query: 132 DYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVS 191
DYIARIVE+FES+DGEP F A+WFYRAEDTVIKD + +RVFLS++ DDNPL+CIVS
Sbjct: 125 DYIARIVEMFESIDGEPLFTAQWFYRAEDTVIKDYVKTAESRRVFLSEIRDDNPLDCIVS 184
Query: 192 KAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNIN-----------------N 234
K KIA V N+DL K++N+PPCDLYYDMKYTLP LT+ I N
Sbjct: 185 KVKIALVEPNLDLAEKERNLPPCDLYYDMKYTLPFLTYETIKTDDSGRDSGSSSTISSEN 244
Query: 235 ESNRRDSDASSTISSETGSNSPIGQPEMS---LLDLYSGCGAMSTGLCIGASLSGVKLVT 291
+SN D T + S + E S LLDLYSGCGAMSTGLC+GASLSGVKLVT
Sbjct: 245 DSNNSIDDVKVTTAKPLKVLSKVHSSEKSELYLLDLYSGCGAMSTGLCMGASLSGVKLVT 304
Query: 292 RWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNF 351
+WA+DIN ACKSLK NHPET+VRNEAA+DFLSLLKEW KLC+ FS++ ++K PEQS N
Sbjct: 305 KWAVDINAFACKSLKTNHPETEVRNEAAEDFLSLLKEWEKLCRKFSLFGSEKHPEQSSNS 364
Query: 352 MSEEEEEEEEEEEENDDDANVPNEE--FEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGP 409
S+EEEE+EEEEEE +++ FEVE+L+AVCYGDPNK K G+YFKVRWKGYGP
Sbjct: 365 ASDEEEEDEEEEEEEKGKDKDDDDDEIFEVEKLLAVCYGDPNKVNKRGLYFKVRWKGYGP 424
Query: 410 SEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQA 469
SEDTWEPI+GLS CK+KLKEFVTKG+RS ILPLPGD DFICGGPPCQG+SGFNRFRN +A
Sbjct: 425 SEDTWEPIEGLSDCKDKLKEFVTKGFRSKILPLPGDADFICGGPPCQGISGFNRFRNTKA 484
Query: 470 ALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGI 529
L+D KN Q++V+MD++EYLKPKYVLMENVVDIL+F+GGFL RYA+GRL+SM+YQ RLG+
Sbjct: 485 PLDDPKNHQMVVYMDIVEYLKPKYVLMENVVDILRFAGGFLVRYALGRLISMNYQARLGM 544
Query: 530 MAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQ 589
MAAGSYGLPQFR+RVF+WG++P + LPQYPLPTHE+V +G IPNEF+EI VAY PCQ
Sbjct: 545 MAAGSYGLPQFRMRVFMWGSQPSESLPQYPLPTHEVVVKGGIPNEFEEITVAYNKLDPCQ 604
Query: 590 LEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPS 649
LEK + L DAI DLP V N+ES+DERKYGT +++FQKYIRL++ DVV ++ + AS P
Sbjct: 605 LEKALYLGDAILDLPPVNNDESQDERKYGTTPQSDFQKYIRLKKSDVVGFATDKNASHPQ 664
Query: 650 LLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL 709
+LYDHRP ++N+DDY+RVC +PK+KGANFRD PGVLVG DNKV WDP++ERV+L SGKPL
Sbjct: 665 MLYDHRPLKLNDDDYQRVCRVPKKKGANFRDFPGVLVGTDNKVEWDPAVERVLLPSGKPL 724
Query: 710 VPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGF 769
VPDYAM F +S KPFGRLWWDE V TVVTRA+PHN+I++HP QDRVL+IRENARLQGF
Sbjct: 725 VPDYAMSFVRGTSCKPFGRLWWDETVATVVTRAEPHNQIVIHPMQDRVLSIRENARLQGF 784
Query: 770 PDCYQLFGPVKER 782
PDCYQL GPVKER
Sbjct: 785 PDCYQLHGPVKER 797
>gi|297739809|emb|CBI29991.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 1032 bits (2669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/765 (65%), Positives = 606/765 (79%), Gaps = 32/765 (4%)
Query: 48 EEPVELVTRVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALN------------- 94
EE L V KKT+K++ ++ V P+S +EA +++P RY +
Sbjct: 9 EEAAPLQPCVVKKTKKSRAAAEASVVGAPISVNEARQKWPQRYISTFRKGSDSRTKDESI 68
Query: 95 EEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARW 154
E E++LQAR H+T+A VDGC+Y L D AYVKAE+G D+IA+IVELFE++D EPYF A+W
Sbjct: 69 EAEDILQARRHFTEAVVDGCIYKLYDYAYVKAEDGQPDFIAKIVELFETIDREPYFTAQW 128
Query: 155 FYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPC 214
F+RAEDTVIKD A LVD+KRVF SD+ DDNPL+CIVSK +I +VA N+DL K+K IPPC
Sbjct: 129 FFRAEDTVIKDHAHLVDQKRVFYSDMRDDNPLDCIVSKVEIVQVAPNVDLAEKEKTIPPC 188
Query: 215 DLYYDMKYTLPHLTFLNINNESNRRDSDASSTISSETG-------SNSPIGQPE------ 261
DLYYDM Y+L HLTF N+ E++R +SD SSTISSE G NS IG+
Sbjct: 189 DLYYDMSYSLKHLTFANLLTENSRTESDESSTISSEIGLNSTTDGINSAIGESSQVHKFQ 248
Query: 262 ---MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEA 318
M+LLDLYSGCGAMSTGLC+GASLSG+KLVTRWA+DINPHAC+SLK NHPET+VRNEA
Sbjct: 249 GSGMTLLDLYSGCGAMSTGLCLGASLSGLKLVTRWAVDINPHACESLKLNHPETEVRNEA 308
Query: 319 ADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFE 378
A+DFLSLLKEWA LC+ FS+ + + PE +N +S ++EE+ + DD + VP EFE
Sbjct: 309 AEDFLSLLKEWATLCEDFSLLGSRR-PE-VVNPISNRSGSDDEEDADGDDGSPVPRGEFE 366
Query: 379 VERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSN 438
V++L+A+CYGDPN+ KPG+YFKVRWKGYGPS+DTWEPI+GLSKCK+ +KEFV KGYRS+
Sbjct: 367 VKKLVAICYGDPNEINKPGLYFKVRWKGYGPSDDTWEPIEGLSKCKKSVKEFVKKGYRSS 426
Query: 439 ILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMEN 498
ILPLPGDVDFICGGPPCQGVSGFNRFRN +A L+D KN QL+VFMD++ YLKPKYVLMEN
Sbjct: 427 ILPLPGDVDFICGGPPCQGVSGFNRFRNTEAPLDDPKNHQLVVFMDIVNYLKPKYVLMEN 486
Query: 499 VVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQY 558
VVDILKF+GGFL RYA+GRLVSM+YQ RLG+MAAGSYG+PQ+R+RVFLWGA P +KLP Y
Sbjct: 487 VVDILKFAGGFLGRYAMGRLVSMNYQARLGMMAAGSYGVPQYRMRVFLWGAHPMEKLPPY 546
Query: 559 PLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYG 618
PLPTH+++ RGV+PNEF+EI V Y ++ C+LEK + L DAISDLP VTN +DE Y
Sbjct: 547 PLPTHDVIGRGVVPNEFEEITVGYDKSELCKLEKALFLGDAISDLPPVTNYNGQDEMPYN 606
Query: 619 TVARTEFQKYIRLRRHDVVNLSSAQM-ASRPSLLYDHRPFQVNNDDYERVCCIPKRKGAN 677
A TEFQ+YIRLR+HD+V S A+ AS P +LYDHRP Q+N DD ERVC IPK+KGAN
Sbjct: 607 KAAHTEFQRYIRLRKHDMVYCSDAEKDASEPPMLYDHRPLQLNEDDNERVCRIPKKKGAN 666
Query: 678 FRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNT 737
FRDLPGV+VG DN+V WDPSMERV+L SGKPLVPDYAM F STKPF RLWWDEIV T
Sbjct: 667 FRDLPGVMVGSDNRVEWDPSMERVLLPSGKPLVPDYAMSFVRGKSTKPFARLWWDEIVAT 726
Query: 738 VVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
VVTRA+PHN+ ++HP+QDRVLTIRENAR QGFPDCY+L GPVKER
Sbjct: 727 VVTRAEPHNQAIIHPTQDRVLTIRENARFQGFPDCYKLCGPVKER 771
>gi|356495335|ref|XP_003516534.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max]
Length = 834
Score = 974 bits (2517), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/773 (61%), Positives = 588/773 (76%), Gaps = 43/773 (5%)
Query: 44 EEVKEEPVELVTRVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRY------------- 90
++ + + V L+ +KK + + P+ D FV P+ + EA ++P RY
Sbjct: 12 DDAQNDTVSLLPSQRKKPKHSAPNPDACFVGKPIPSAEARAKWPHRYPSEVKKKAPARSS 71
Query: 91 -KALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPY 149
+ +E EV+ ARCHY QA VDG +YNL DDAYVKAE+G DYIARIVE+FE+VD E
Sbjct: 72 EEVTSENSEVMLARCHYRQAKVDGVVYNLYDDAYVKAEDGKPDYIARIVEMFETVDKEQC 131
Query: 150 FKARWFYRAEDTV---IKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEA 206
F A+WFYRAEDTV IK+ LVD+KRVF+SDV+D NPL+CIVSK KI + ++DL +
Sbjct: 132 FMAQWFYRAEDTVMQVIKNHGDLVDKKRVFISDVKDVNPLDCIVSKVKIFKKNPSVDLAS 191
Query: 207 KQKNIPPCDLYYDMKYTLPHLTFLNINNESNRRDSDA----------------SSTISSE 250
K+ +P CD YYDMKYT+P+LTF N+ N N DSDA ++ +
Sbjct: 192 KKAKLPFCDYYYDMKYTVPYLTFSNLVNGKN--DSDASSTISSESGSIGCVNNANLAKRK 249
Query: 251 TGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP 310
T N+ G + +LLDLYSGCGAMSTGLC+GASL+G+KLVT WA+DIN HACKSLK NHP
Sbjct: 250 TTQNNSSGSSQWTLLDLYSGCGAMSTGLCLGASLAGIKLVTMWAVDINAHACKSLKLNHP 309
Query: 311 ETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDA 370
ET VRNE A+DFL+L+K WAKLC+ F++ +++ + + +E E ++EE N D
Sbjct: 310 ETHVRNEPAEDFLNLIKAWAKLCEEFALLGSER-SDSDPDMDEDENEAVQKEESGNQSDL 368
Query: 371 NVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEF 430
EEFEVE+L+AVCYGDPN KKPG+YFKVRW GY S DTWEPI GLS CKE +K+F
Sbjct: 369 ----EEFEVEKLLAVCYGDPNGVKKPGLYFKVRWLGYDSSYDTWEPIDGLSDCKEVMKDF 424
Query: 431 VTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLK 490
VTKGY+ +LPLPGD +FICGGPPCQGVSGFNRFRN +A LED KN+QLLV+MD+I++LK
Sbjct: 425 VTKGYKKRLLPLPGDANFICGGPPCQGVSGFNRFRNAEAPLEDTKNKQLLVYMDIIDFLK 484
Query: 491 PKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR 550
PKYVLMENVVDILKFSGG+L RYA+GRLV+M+YQ R+G+MAAGSYGLPQFR+RVFLWGAR
Sbjct: 485 PKYVLMENVVDILKFSGGYLGRYAIGRLVAMNYQARMGMMAAGSYGLPQFRMRVFLWGAR 544
Query: 551 PFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNE 610
P ++LP YPLPTHE+V+RG +P EF+EI VAY CQL +LL DAISDLP VTN+E
Sbjct: 545 PTEQLPPYPLPTHEVVSRGFVPTEFEEITVAYDKKDTCQLAGALLLDDAISDLPPVTNDE 604
Query: 611 SEDERKYGTVARTEFQKYIRLRRHDVV-NLSSAQMASRPSLLYDHRPFQVNNDDYERVCC 669
++DER YG ARTEFQ+YIRL+++++V ++++AQ R +LYDHRP Q+N DDY+RVC
Sbjct: 605 NQDERNYGAPARTEFQRYIRLKKNEMVGSMATAQSTPR-RILYDHRPLQLNKDDYDRVCQ 663
Query: 670 IPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRL 729
IP++KGANFRDLPGVLV NKV WDPS+ERVML SGKPLVPDYAM F +STKPFGRL
Sbjct: 664 IPQKKGANFRDLPGVLVN-GNKVEWDPSVERVMLDSGKPLVPDYAMTFVRGTSTKPFGRL 722
Query: 730 WWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
WWDEIV TVVTRA+PHN+ +LHP Q+RVLTIRENARLQGFPDCY+L GPVKER
Sbjct: 723 WWDEIVPTVVTRAEPHNQAILHPRQNRVLTIRENARLQGFPDCYKLCGPVKER 775
>gi|356540854|ref|XP_003538899.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max]
Length = 830
Score = 972 bits (2512), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/766 (60%), Positives = 586/766 (76%), Gaps = 34/766 (4%)
Query: 45 EVKEEPVELVTRVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRY-------------- 90
+ +++ V L+ + K + +S+ F P+ EAL ++P RY
Sbjct: 11 DAQDDTVSLLPSQRNKAKHPNSNSNACFAGKPIPPAEALAKWPHRYPSEGKKKGSARTSK 70
Query: 91 KALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYF 150
+A +E EV+ ARCHY QA VDG +YNL DDAYVKAE+G DYIARIVE+FE+VD E F
Sbjct: 71 EATSENSEVMPARCHYRQAKVDGVVYNLYDDAYVKAEDGKPDYIARIVEMFETVDKEQCF 130
Query: 151 KARWFYRAEDTV---IKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAK 207
A+WFYRAEDTV IK+ LVD+KR+F+SDV+D NPL+CIVSK KI + + ++DL +K
Sbjct: 131 TAQWFYRAEDTVMQVIKNHGDLVDKKRIFISDVKDVNPLDCIVSKVKIYKKSPSVDLTSK 190
Query: 208 QKNIPPCDLYYDMKYTLPHLTFLNINNESNRRDSDA-----------SSTISSETGSNSP 256
+ +P CD YYDMKYT+P+LTF NI NES+ + + ++ + +T N+
Sbjct: 191 KGKLPSCDYYYDMKYTVPYLTFSNIVNESDASSTISSESGSNGCVSNANLANGKTTQNNS 250
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
G E +LLDLYSGCGAMSTGLC GASL+G+KLVTRWA+DIN HAC+SLK NHPET+VRN
Sbjct: 251 SGSSEWTLLDLYSGCGAMSTGLCFGASLAGIKLVTRWAVDINAHACESLKLNHPETQVRN 310
Query: 317 EAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEE 376
E A+DFL+L+K WAKLC+ F++ ++++ + + +E E +EE N D+ EE
Sbjct: 311 EPAEDFLNLIKSWAKLCEEFALLGSERL-DSDPDMDEDENEAVRKEESGNQSDS----EE 365
Query: 377 FEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYR 436
FEVE+L+AVCYGDPN KKPG+YFKVRW GY S DTWEPI+GLS CKE +K+FVTKGY+
Sbjct: 366 FEVEKLLAVCYGDPNDVKKPGLYFKVRWLGYASSYDTWEPIEGLSDCKEAMKDFVTKGYK 425
Query: 437 SNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLM 496
+LPLPGD +FICGGPPCQGVSGFNRFRN A LED KN+QLLV+MD+I++LKPKYVLM
Sbjct: 426 KRLLPLPGDANFICGGPPCQGVSGFNRFRNAAAPLEDTKNKQLLVYMDIIDFLKPKYVLM 485
Query: 497 ENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP 556
ENVVDIL+FSGG+L RYA+ RLV+M+YQ R+G+MAAGSYGLPQFR+RVFLWGARP +KLP
Sbjct: 486 ENVVDILRFSGGYLGRYAICRLVAMNYQARMGMMAAGSYGLPQFRMRVFLWGARPTEKLP 545
Query: 557 QYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERK 616
YPLPTHE+V+RG +P EF+EI VAY C L +LL DAISDLP VTN+E++DER
Sbjct: 546 PYPLPTHEVVSRGSVPTEFEEITVAYDKKDTCHLAGALLLEDAISDLPHVTNDENQDERN 605
Query: 617 YGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGA 676
Y + TEFQKYIRL+++++V ++ ++ +LYDHRP Q+N DDYERVC IP++KGA
Sbjct: 606 YEAPSETEFQKYIRLKKNEMVGSMASAQSAPDRILYDHRPLQLNKDDYERVCQIPQKKGA 665
Query: 677 NFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVN 736
NFRDLPGVLV NKV+WDPS++RVML SGKPLVPDYAM F +S+KPFGRLWWDEIV+
Sbjct: 666 NFRDLPGVLVN-GNKVQWDPSVQRVMLDSGKPLVPDYAMTFVRGTSSKPFGRLWWDEIVS 724
Query: 737 TVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
TVVTRA+PHN+ +LHP+Q+RVLTIRENARLQGFPDCY+L GPVKER
Sbjct: 725 TVVTRAEPHNQAILHPTQNRVLTIRENARLQGFPDCYKLCGPVKER 770
>gi|358345790|ref|XP_003636958.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355502893|gb|AES84096.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 827
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/763 (60%), Positives = 579/763 (75%), Gaps = 24/763 (3%)
Query: 34 HQQQEEQREDEEVKEEPVELVTRVKKKTQKNKPDSD-LFFVSPPVSADEALKRYPDRYKA 92
H + ++ + V+EE V L+ +KK++++ +SD FV P+ ADEA K++P RY
Sbjct: 18 HSSKRKKAKQSPVEEELVSLLPSRRKKSKQSSVNSDDACFVGEPIPADEAQKKWPHRYTK 77
Query: 93 LNE--EEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYF 150
+E E E L+A+ HY +A VDG LY L D+AYVK EEG DYIARIVE+FE+ D E YF
Sbjct: 78 NDELSEGESLKAKFHYHEAKVDGILYKLEDNAYVKGEEGKEDYIARIVEMFETPDEEQYF 137
Query: 151 KARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKN 210
A+WFYRAEDTVIKD LVD+KR+F+SDV+D+NPL+C+V K I +++ + AK+K
Sbjct: 138 TAQWFYRAEDTVIKDHGNLVDKKRIFISDVKDENPLDCLVRKVNIVQISPDA---AKKKK 194
Query: 211 IPPCDLYYDMKYTLPHLTFLNINNES-----------NRRDSDASSTISSETGSNSPIGQ 259
IPPC+ Y+DMKYT+P+LTF N+ NES N +D ++ + ++ +
Sbjct: 195 IPPCEFYFDMKYTVPYLTFSNVGNESETSTLSSESGYNVHAADKNA-VKEKSSQIKECNR 253
Query: 260 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 319
PE +LLDLYSGCGAMSTGLC GAS+SG+KLVTRWA+DIN HAC+SLK NHPET VRNE
Sbjct: 254 PEWTLLDLYSGCGAMSTGLCFGASISGIKLVTRWAVDINDHACESLKLNHPETHVRNEPT 313
Query: 320 DDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEV 379
+DFLSLLKEWAKLC+ F + + + LN E EE + E N D+ V FEV
Sbjct: 314 EDFLSLLKEWAKLCEKFVLNGAEST-DSDLNAGEEAGEEADGEATNNSPDSEV----FEV 368
Query: 380 ERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNI 439
ERL+++CYGDPN+ +KPG+YF+V+WKGY S DTWEPI+GLS+CK+ +K+FV GY+ I
Sbjct: 369 ERLLSICYGDPNEDEKPGLYFRVQWKGYDSSYDTWEPIEGLSECKDAMKDFVINGYKEKI 428
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LPLPG DFICGGPPCQGVSGFNRFRN A L+D KN+QL+V+MD+I +LKPKYVLMENV
Sbjct: 429 LPLPGQADFICGGPPCQGVSGFNRFRNKNAPLDDEKNKQLIVYMDIINFLKPKYVLMENV 488
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
VDILKF+GGFL RYAVGRLV+M+YQ R+G+MAAGSYGLPQFR+RVFLWGA +KLP YP
Sbjct: 489 VDILKFAGGFLGRYAVGRLVAMNYQARMGMMAAGSYGLPQFRMRVFLWGALTTEKLPSYP 548
Query: 560 LPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGT 619
LPTHE+ +R VIP EF+ I VAY+ N+ CQL K + L D I DLP V N+ S+DE+ YGT
Sbjct: 549 LPTHEVESRSVIPIEFEAITVAYSTNEKCQLAKALYLGDTIDDLPPVENDNSDDEKSYGT 608
Query: 620 VARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFR 679
RT+FQKYIRL+R ++VN + ++ +LYDHRP ++N DDYERVC IPK KGANFR
Sbjct: 609 TPRTDFQKYIRLKRSEMVNYLADSQSAPSGMLYDHRPLKLNTDDYERVCHIPKEKGANFR 668
Query: 680 DLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVV 739
DL GVLV +NKV WDPS +RV LKSGKPLVPDYAM F +S+KPFGRLWWDEIV+TVV
Sbjct: 669 DLKGVLVK-ENKVEWDPSFKRVYLKSGKPLVPDYAMTFVRGTSSKPFGRLWWDEIVSTVV 727
Query: 740 TRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
TRA+PHN+ LLHP QDRVL+IRENARLQGFPDCY+L GPVK+R
Sbjct: 728 TRAEPHNQALLHPDQDRVLSIRENARLQGFPDCYKLCGPVKQR 770
>gi|357484051|ref|XP_003612312.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355513647|gb|AES95270.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 835
Score = 944 bits (2439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/748 (61%), Positives = 570/748 (76%), Gaps = 28/748 (3%)
Query: 53 LVTRVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALNE--EEEVLQARCHYTQAS 110
L +R KK Q + D FV P+ ADEA K++P RY +E E+E L+A+ HY +A
Sbjct: 42 LPSRRKKAKQSSVNSDDACFVGEPIPADEAQKKWPHRYTKNDESSEDESLKAKFHYREAK 101
Query: 111 VDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLV 170
VDG LY L D+AYVK EEG DYIA IVE+FE+ + E YF A+WFYRAEDTVIKD LV
Sbjct: 102 VDGILYKLEDNAYVKGEEGKEDYIATIVEMFETPEEEQYFTAQWFYRAEDTVIKDHGNLV 161
Query: 171 DRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFL 230
D+KR+F SDV+D+NPL+C+V K I +++ + AK+K IPPCD Y+DMKY +P+LTF
Sbjct: 162 DKKRIFKSDVKDENPLDCLVRKINIVQISPDA---AKKKKIPPCDFYFDMKYNVPYLTFS 218
Query: 231 NINNE----------------SNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCGAM 274
NI+N SN R +D T +PE +LLDLYSGCGAM
Sbjct: 219 NIDNAHAIIESETSTLSSESGSNVRATDKKGVKEKSTQIKES-NRPEWTLLDLYSGCGAM 277
Query: 275 STGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQ 334
STGLC GAS+SG+KLVT+WA+DIN +AC+SLK NHPET VRNE +DFLSLLKEWAKLC
Sbjct: 278 STGLCFGASISGIKLVTKWAVDINKYACESLKLNHPETYVRNEPTEDFLSLLKEWAKLCD 337
Query: 335 YFSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTK 394
F + + + LN E EE+ ++E ++ D+ V FEVERL+++CYGDPN+ +
Sbjct: 338 EFVLNGAEST-DSDLNAAEEAEEKADDEAMDDSPDSEV----FEVERLLSICYGDPNEDE 392
Query: 395 KPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPP 454
KPG+YFKV WKGY S DTWEPI+GLS+CK+ +K+FV GY+ ILPLPG DFICGGPP
Sbjct: 393 KPGLYFKVHWKGYDSSYDTWEPIEGLSECKDAMKDFVINGYKEKILPLPGQADFICGGPP 452
Query: 455 CQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYA 514
CQGVSGFNRFRN A LED KN+QL+V+M++I++LKPKYVLMENVVDILKF+GGFL RYA
Sbjct: 453 CQGVSGFNRFRNKNAPLEDEKNKQLIVYMNIIDFLKPKYVLMENVVDILKFAGGFLGRYA 512
Query: 515 VGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNE 574
VGRLV+M+YQ R+G+MAAGSYGLPQFR+RVFLWGA +KLP YPLPTH++V+R VIP E
Sbjct: 513 VGRLVAMNYQARMGMMAAGSYGLPQFRMRVFLWGALATEKLPSYPLPTHKVVSRSVIPTE 572
Query: 575 FQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRH 634
F+EI VAY+ N+ CQL K + L AI+DLP V N++S+DER YGT RT+FQKYIRL+R
Sbjct: 573 FEEITVAYSTNENCQLAKALNLEGAINDLPPVENDDSDDERSYGTTPRTDFQKYIRLQRS 632
Query: 635 DVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRW 694
++VN S+ ++ +LYDHRP ++N DDYERVC IPK+KGANFRDL GVLV +NKV W
Sbjct: 633 EMVNYSADSQSAPSGMLYDHRPLKLNTDDYERVCHIPKKKGANFRDLKGVLVK-ENKVEW 691
Query: 695 DPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQ 754
DPS+ERV LKSGKPLVPDYAM F +S+KPFGRLWWDEIV+TVVTRA+PHN++LLHP Q
Sbjct: 692 DPSVERVYLKSGKPLVPDYAMTFVRGTSSKPFGRLWWDEIVSTVVTRAEPHNQVLLHPEQ 751
Query: 755 DRVLTIRENARLQGFPDCYQLFGPVKER 782
DRVL+IRENARLQGFPDCY+L GPVK+R
Sbjct: 752 DRVLSIRENARLQGFPDCYKLCGPVKQR 779
>gi|356497585|ref|XP_003517640.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Glycine
max]
Length = 868
Score = 926 bits (2393), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/769 (59%), Positives = 567/769 (73%), Gaps = 40/769 (5%)
Query: 46 VKEEPVELVTRVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKAL------------ 93
VKEE T V + ++ FV PV +EA +R+P RY+
Sbjct: 50 VKEEAQASFTDVTDGNVSDGEGTNARFVGEPVPDEEARRRWPKRYQEKEKKQSAGPKSNR 109
Query: 94 -NEEEEVLQARCHYTQASVDGC-LYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFK 151
+E+EE+ QAR HYTQA VDGC LY L DDA+VKAEEG +YI +IVE+FE++DG YF
Sbjct: 110 NDEDEEIQQARRHYTQAEVDGCMLYKLYDDAHVKAEEGEDNYICKIVEIFEAIDGALYFT 169
Query: 152 ARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNI 211
A+W+YRA+DTVIK LA L++ KRVF S+V+DDNPL+C+V K IA + N+DLEAK++ I
Sbjct: 170 AQWYYRAKDTVIKKLAYLIEPKRVFFSEVQDDNPLDCLVEKLNIARITLNVDLEAKKETI 229
Query: 212 PPCDLYYDMKYTLPHLTFLNI---NNESNRRDSDASSTISSETGSNSPIGQP-------- 260
PPCD Y D +Y LP+ TF+N+ N ES S S+ ++ G QP
Sbjct: 230 PPCDYYCDTQYLLPYSTFVNLPSENGESGSETSSTISSETNGIGKYEVNSQPKEAFLPEE 289
Query: 261 ----EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
EM LLDLY GCGAMSTGLC+G +LSGV LVTRWA+D+N HAC+ LK NHPET+VRN
Sbjct: 290 SKDPEMKLLDLYCGCGAMSTGLCLGGNLSGVNLVTRWAVDLNQHACECLKLNHPETEVRN 349
Query: 317 EAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEE 376
E+A++FLSLLKEW +LC YFS+ + E+ +N SE++++ EE N +D N NE+
Sbjct: 350 ESAENFLSLLKEWQELCSYFSLVEKKVSHEKYVNLFSEDDDDTSSNEEVNSEDDNELNED 409
Query: 377 ---FEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTK 433
FEV ++AVCYGDPNK K+ G+YFKV WKGY + D+WEPI+GLS CKEK+KEFV++
Sbjct: 410 DEIFEVSEILAVCYGDPNKKKEQGLYFKVHWKGYESALDSWEPIEGLSNCKEKIKEFVSR 469
Query: 434 GYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKY 493
G++S ILPLPGDVD ICGGPPCQG+SGFNRFRN ++ L+D KN+QL+VFMD+++YLKPK+
Sbjct: 470 GFKSQILPLPGDVDVICGGPPCQGISGFNRFRNKESPLDDEKNKQLVVFMDIVQYLKPKF 529
Query: 494 VLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFK 553
LMENVVD++KF+ GFL RYA+GRL+ M+YQ RLGIMAAG+YGLPQFRLRVFLWGA P +
Sbjct: 530 TLMENVVDLVKFAEGFLGRYALGRLLQMNYQARLGIMAAGAYGLPQFRLRVFLWGAAPSQ 589
Query: 554 KLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
KLPQ+PLPTH+++ RGVIP EF+ VAY Q QL+K +LL DAISDLP V NNE D
Sbjct: 590 KLPQFPLPTHDVIVRGVIPLEFEINTVAYNEGQKVQLQKKLLLEDAISDLPRVQNNERRD 649
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E KY A+TEFQ++IRL +H +L+ SLLYDHRP ++N DDY+RVC IPK+
Sbjct: 650 EIKYDKAAQTEFQRFIRLSKHGNTSLN--------SLLYDHRPLELNADDYQRVCRIPKK 701
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDE 733
KG FRDLPGV VG DNKV WDP +ERV L SGKPLVPDYAM F + +S+KPF RLWWDE
Sbjct: 702 KGGCFRDLPGVRVGADNKVEWDPDVERVYLDSGKPLVPDYAMTFVNGTSSKPFARLWWDE 761
Query: 734 IVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
V TVVTRA+PHN+ +LHP QDRVLTIRENARLQGFPD Y+L GPVKER
Sbjct: 762 TVPTVVTRAEPHNQAILHPEQDRVLTIRENARLQGFPDFYKLCGPVKER 810
>gi|159461700|gb|ABW96889.1| CMT-type DNA-methyltransferase [Elaeis guineensis]
Length = 925
Score = 921 bits (2380), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/813 (57%), Positives = 580/813 (71%), Gaps = 43/813 (5%)
Query: 7 RTSTQVAAEESNHSKARRRK--LNLAEQQHQQQEEQREDEEVKEEPV---ELVTRVKKKT 61
R + + AE+ S++ ++K L L + +E ED K+ + K K
Sbjct: 60 REAVEEQAEQVGRSRSAQKKPILALGNDETVGVDEGEEDAGGKQSLLPQKRAAPAKKSKK 119
Query: 62 QKNKPDSDLFFVSPPVSADEALKRYPDRYKALN--------------EEEEVLQARCHYT 107
+ N+ + + FV PV DEA KR+P+RY+ N +EEEVL+AR HY
Sbjct: 120 KGNEKEVEHCFVGEPVPDDEAKKRWPERYQRKNAGKRALASASSKKSDEEEVLKARRHYW 179
Query: 108 QASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLA 167
QA VD +YNL DDAY+KA +G DYI RIVE FE+ DG+ YF A+WF+RAEDTVIK++A
Sbjct: 180 QAMVDNVIYNLNDDAYIKAGDGEPDYIGRIVEFFETTDGQLYFAAQWFFRAEDTVIKEIA 239
Query: 168 ----CLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYT 223
+ D +RVFLS+ ++DN L+CIVSK +I V +N+DL+AK+ +IPPCDLYYDM Y+
Sbjct: 240 HDPKTVHDPRRVFLSEEKNDNVLDCIVSKIRIVRVESNIDLKAKEDSIPPCDLYYDMSYS 299
Query: 224 LPHLTFLNINNESNR---------RDSDASSTISSETGSNSPIGQPE----MSLLDLYSG 270
L + TF N+ ES R DAS+ + S+S +SLLDLYSG
Sbjct: 300 LSYSTFGNLPPESLRAGSETSSTISSEDASNVCKGKCQSDSEASSSGEKRVLSLLDLYSG 359
Query: 271 CGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWA 330
CGAMSTGLC+GA+LSG+KL TRWA+DINP+AC+SLK NHP T+VRNE A+DFL+LL+EW
Sbjct: 360 CGAMSTGLCLGANLSGLKLETRWAVDINPYACESLKLNHPHTEVRNEKAEDFLALLREWE 419
Query: 331 KLCQYFSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDP 390
KLC F++ + +F E ++E+E+ VP EFEV +L+ +CYGDP
Sbjct: 420 KLCAKFNLIGMES------SFAQGSESSGSDDEDESRISTEVPRGEFEVGKLVGICYGDP 473
Query: 391 NKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFIC 450
+ K G+ FKVRWKGYGPSEDTWEPI GLSKC+E++K+FV GY+ NILPLPG VD IC
Sbjct: 474 SNIGKVGLKFKVRWKGYGPSEDTWEPIDGLSKCQERIKDFVQNGYKKNILPLPGKVDVIC 533
Query: 451 GGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFL 510
GGPPCQG+SGFNRFRN A LED KN+Q++VFMD++++LKPKYVLMENVVDILKF+ GFL
Sbjct: 534 GGPPCQGISGFNRFRNYNAPLEDPKNQQMVVFMDIVDFLKPKYVLMENVVDILKFAHGFL 593
Query: 511 ARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGV 570
RYA+ RLV+M+YQ RLG+M AG YGLPQFR+RVFLWGA P + LPQ+PLPTH++V RG
Sbjct: 594 LRYALSRLVAMNYQARLGMMVAGCYGLPQFRMRVFLWGACPTEILPQFPLPTHDVVVRGG 653
Query: 571 IPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIR 630
PNEF++ IVAY NQ QLE+ +LL DAISDLP V NNE DE YG RTEFQ +IR
Sbjct: 654 APNEFEQNIVAYDENQHRQLERALLLEDAISDLPQVGNNEMRDEMPYGRPPRTEFQHFIR 713
Query: 631 LRRHDVVN-LSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPD 689
L R ++VN S A S+ ++L+DHRP Q+N DDY RVC IPK+KGANFRDLPGV VGPD
Sbjct: 714 LTREELVNSASGAGRLSQKAILFDHRPLQLNEDDYLRVCRIPKKKGANFRDLPGVKVGPD 773
Query: 690 NKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRIL 749
N V WDP +ERV+L SGKPLVPDYAM F S KPFGRLWWDE V TVVTRA+PHN+ L
Sbjct: 774 NVVEWDPEIERVLLPSGKPLVPDYAMSFIKGKSLKPFGRLWWDETVPTVVTRAEPHNQAL 833
Query: 750 LHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
LHP QDRVL+IRENARLQGFPD Y+L GPVKER
Sbjct: 834 LHPEQDRVLSIRENARLQGFPDFYRLRGPVKER 866
>gi|330370547|gb|AEC12443.1| chromomethylase 3 [Gossypium hirsutum]
Length = 824
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/745 (58%), Positives = 557/745 (74%), Gaps = 25/745 (3%)
Query: 56 RVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALN-----------EEEEVLQARC 104
+ KK N+ + + F+ PV +EA +R+P RY+ + EE++QAR
Sbjct: 30 KTKKDVAVNEDEEETKFLGEPVDDEEARRRWPKRYQGKGAKKVISKSSNGDSEEIIQARR 89
Query: 105 HYTQASVDGCL-YNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVI 163
HYTQA VDGC+ +NL DDA+VKAE+G YI +IVE+FE+VDG+ YF A+WFYRA+DTV+
Sbjct: 90 HYTQAKVDGCMIFNLYDDAHVKAEDGEDCYICKIVEMFEAVDGDLYFTAQWFYRAQDTVL 149
Query: 164 KDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYT 223
K L L+D+KRVF S ++DDNPL+C+V+K IA+V DLEAK K IP CD Y DM Y
Sbjct: 150 KTLGHLIDKKRVFFSQIQDDNPLDCLVAKLNIAKV----DLEAKNKEIPSCDYYCDMLYK 205
Query: 224 LPHLTFLNINNESNRRDSD-ASSTISSET-----GSNSPIGQPEMSLLDLYSGCGAMSTG 277
L + +F N+ E S+ ASSTIS ++ G+NS G + SLLDLYSGCGAMSTG
Sbjct: 206 LEYSSFTNLPPEGKTNASEEASSTISDDSPDTVNGANS--GSEDASLLDLYSGCGAMSTG 263
Query: 278 LCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFS 337
LC+GA+++G++LVT+WA+DIN +AC+SL++NHPET VRNE+A+DFL+LLKEW +LC FS
Sbjct: 264 LCLGANMAGLRLVTKWAVDINKYACESLQWNHPETTVRNESAEDFLALLKEWERLCASFS 323
Query: 338 IYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPG 397
+ ++ + QS N S E+ +EEEE D++ + E FEVE+ +A+CYGDP + + G
Sbjct: 324 LSKSENLERQSFN-SSVNEDNVNDEEEEEDENEDGDGEVFEVEKFLAICYGDPKEKGERG 382
Query: 398 VYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQG 457
+Y KVRWK YGP EDTWEP+ GL C+E LK+FVT G+++ ILPLPGDVD ICGGPPCQG
Sbjct: 383 LYLKVRWKNYGPEEDTWEPLDGLGDCRECLKDFVTSGFKAKILPLPGDVDVICGGPPCQG 442
Query: 458 VSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGR 517
+SGFNRFRN L+D KN+QL VF +++EYLKPK+VLMENVVDI+KF+ G+L RYA+ +
Sbjct: 443 ISGFNRFRNKDNPLQDEKNKQLQVFTEIVEYLKPKFVLMENVVDIVKFAEGYLGRYALSK 502
Query: 518 LVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQE 577
L+ ++YQ R+G+MAAG+YGLPQFR+R F WGARP +KLPQYPLPTH++V RGVIP EF+
Sbjct: 503 LIHLNYQVRMGMMAAGAYGLPQFRMRAFFWGARPNQKLPQYPLPTHDLVLRGVIPVEFEM 562
Query: 578 IIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVV 637
V + + +LEK +LL DAISDLP V N E +DE Y +TEFQ++IRLRR ++
Sbjct: 563 NTVGWEEGKKIELEKKLLLEDAISDLPSVGNYEDKDEMDYEKEPKTEFQRFIRLRREEMP 622
Query: 638 NLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPS 697
SS LLYDHRP Q+N DDY+RVC +PKRKGANFRD PGV+V NKV WDP+
Sbjct: 623 GFSSLNAKPTKHLLYDHRPLQLNTDDYQRVCRVPKRKGANFRDFPGVIVNSGNKVEWDPN 682
Query: 698 MERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRV 757
+ERV L+SGKPLVPDYAM F SS+KPF RLWWDE V TVVTRA+PHN+ +LHP QDRV
Sbjct: 683 VERVYLESGKPLVPDYAMSFVGGSSSKPFARLWWDETVPTVVTRAEPHNQAILHPVQDRV 742
Query: 758 LTIRENARLQGFPDCYQLFGPVKER 782
L+IRENARLQGFPD Y+LFGPVKER
Sbjct: 743 LSIRENARLQGFPDYYKLFGPVKER 767
>gi|359478779|ref|XP_002283355.2| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Vitis
vinifera]
Length = 956
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/761 (57%), Positives = 559/761 (73%), Gaps = 45/761 (5%)
Query: 58 KKKTQKNK-PDSDLFFVSPPVSADEALKRYPDRY--KALNEE-------------EEVLQ 101
K+K +K + + D V + +EA +R+P+RY K N + EE+++
Sbjct: 150 KRKMKKEEVEEGDCRLVGEVIPDEEARQRWPERYEPKKKNTQASGSKSSKDKDDSEEIVK 209
Query: 102 ARCHYTQASVDG-CLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAED 160
ARCHY QA +DG + NL DDA+VKA + A YI +IVELF ++DG PYF A+WFYRA D
Sbjct: 210 ARCHYRQAEIDGRVIVNLNDDAHVKAGDNADHYICKIVELFVALDGTPYFTAQWFYRARD 269
Query: 161 TVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDM 220
TVIKD A L+D KRVF S++ DDNPL+C+V K IA V N+DLEA++ I CD YYDM
Sbjct: 270 TVIKDHANLIDNKRVFFSEMRDDNPLDCLVQKLNIARVPHNLDLEARKLAISSCDYYYDM 329
Query: 221 KYTLPHLTFLNINNESNRRDSDASSTISSETGSNSPIGQ----------------PEMSL 264
Y L + +F+ + E++R +S+A STISSE + + EM+L
Sbjct: 330 LYLLDYSSFIKLPPENSRVNSEALSTISSEANMDGSTCELKSDSEEVSQARERSLSEMTL 389
Query: 265 LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLS 324
LDLYSGCGAMS+GLC+GA +SGV LVTRWAIDIN +AC+S++ NHPET+VRNE+A+DFL+
Sbjct: 390 LDLYSGCGAMSSGLCLGAKMSGVNLVTRWAIDINAYACESVRLNHPETQVRNESAEDFLA 449
Query: 325 LLKEWAKLCQYFSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPN--EEFEVERL 382
LL+EW KLC FS+ L+ + + +EE ++++ ++D++ + E FEV+++
Sbjct: 450 LLREWEKLCVRFSLIGNKDPNAHDLDPIDAKADEENDDDDNDNDNSEDEDDFEVFEVQKI 509
Query: 383 IAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPL 442
I +CYGDP ++FKVRWKGYGPS D+WEP +GL C E +K+FVT+GY+S ILPL
Sbjct: 510 IGICYGDPKDKGDRELHFKVRWKGYGPSADSWEPFEGLGNCCESIKDFVTEGYKSKILPL 569
Query: 443 PGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDI 502
PGDVD ICGGPPCQG+SGFNRFRN + LED KN+QL+VFMDV+ YLKP++VLMENVVDI
Sbjct: 570 PGDVDVICGGPPCQGISGFNRFRNKENPLEDPKNKQLVVFMDVVNYLKPRFVLMENVVDI 629
Query: 503 LKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
+KF+GG+L RYA+GRL+ M+YQTR+G+MAAG+YGLPQFR+RVF+WGAR + LPQYPLPT
Sbjct: 630 VKFAGGYLGRYALGRLIGMNYQTRMGMMAAGAYGLPQFRMRVFMWGARFEEVLPQYPLPT 689
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPC-QLEKGVLLSDAISDLPLVTNNESEDERKYGTVA 621
H+++ RGVIP EF+ VAY +LE +LL+DAISDLP VTN+E+ DE YG
Sbjct: 690 HDVIIRGVIPLEFEMNTVAYDEGHKFDELETKLLLADAISDLPPVTNDEARDEMPYGKAP 749
Query: 622 RTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDL 681
+TEFQ++IRLR++ + SLLYDHRP ++N DDY+RVC IPK KGANFRDL
Sbjct: 750 QTEFQRFIRLRKNGL---------QTNSLLYDHRPLELNADDYQRVCQIPKTKGANFRDL 800
Query: 682 PGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR 741
PGVLVG DNKV WDP++ER+ L SGKPLVPDYAM F SS+KPFGRLWWDE V TVVTR
Sbjct: 801 PGVLVGADNKVEWDPNVERIYLPSGKPLVPDYAMSFVGGSSSKPFGRLWWDETVPTVVTR 860
Query: 742 AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
A+PHN+++LHP QDRVL+IRENARLQGFPD YQL GPVKER
Sbjct: 861 AEPHNQVILHPEQDRVLSIRENARLQGFPDYYQLRGPVKER 901
>gi|449462605|ref|XP_004149031.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Cucumis
sativus]
Length = 855
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/755 (57%), Positives = 562/755 (74%), Gaps = 37/755 (4%)
Query: 56 RVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRYK-----------ALNEEEEVLQARC 104
+VK + + D+ F+ P +A R+P RY + ++ EEV+QA
Sbjct: 54 KVKAELSVEEDDAPARFLQPHFPDSDARVRWPLRYARKKKNVVEEKKSRDDSEEVIQALH 113
Query: 105 HYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIK 164
HY+QA VD YNL DDA+VKAE DYI +I+E+FE+VDG+ YF A+W+YRA+DTV+K
Sbjct: 114 HYSQAKVDNITYNLLDDAHVKAEGEEDDYICKIIEMFEAVDGQLYFTAQWYYRAKDTVVK 173
Query: 165 DLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTL 224
D A L++ KRVF S+V DDNPL+C+V K IA + MD K+ +P CD Y DM Y L
Sbjct: 174 DHAHLINDKRVFFSEVRDDNPLDCLVKKLNIARIPLTMD--EKKNCLPSCDFYCDMLYLL 231
Query: 225 PHLTFLNINNESNRRDSDASSTISSETGSN------SPIG---------QPEMSLLDLYS 269
P+ +F+ + + S+ SSTISS+ +N S IG +P+++LLDLYS
Sbjct: 232 PYSSFVKLPTSEKKVGSETSSTISSDVDTNEACEVNSQIGDVTQAQQCCKPDVALLDLYS 291
Query: 270 GCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEW 329
GCGAMSTGLC+G +LSGV LVT+WA+D+N +AC+SL+FNHPET+VRNE A+DFLSL+KEW
Sbjct: 292 GCGAMSTGLCLGGNLSGVNLVTKWAVDLNQYACESLRFNHPETQVRNEMAEDFLSLVKEW 351
Query: 330 AKLCQYFSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGD 389
LC+Y S+ + + ++ ++ ++E+EEE E+E+ +D+ EVE+++A+CYGD
Sbjct: 352 EVLCKYCSLVKSKEPQQKYIDLFADEDEEENEDEKTEEDEEVF-----EVEKILAICYGD 406
Query: 390 PNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFI 449
PN+TKK G++ KVRWKGYG EDTWEPI GLS CKEKLK+FVT GY+S ILPLPGDVD I
Sbjct: 407 PNETKKRGLFLKVRWKGYGSDEDTWEPIDGLSNCKEKLKDFVTSGYKSKILPLPGDVDVI 466
Query: 450 CGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGF 509
CGGPPCQG+SGFNRFRN + LED KN+QL+V+MD++EYL+PKYVLMENVVDI+KF+ GF
Sbjct: 467 CGGPPCQGISGFNRFRNKENPLEDEKNKQLVVYMDLVEYLRPKYVLMENVVDIVKFANGF 526
Query: 510 LARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARG 569
L RYA+GRL+SM+YQ R+G+MAAG+YGLPQFR+R+F+WGA+P +KLPQYPLPTH++V RG
Sbjct: 527 LGRYALGRLISMNYQVRMGMMAAGAYGLPQFRMRMFMWGAQPTEKLPQYPLPTHDVVVRG 586
Query: 570 VIPNEFQEIIVAY-ANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKY 628
VIP EF+ +VAY ++ LEK +LL DAISDLP V N+E DE Y +TEFQ
Sbjct: 587 VIPTEFEMNVVAYEEGHKDVHLEKKLLLEDAISDLPAVENDERRDEMPYHEPPKTEFQHL 646
Query: 629 IRLRRHDVVNLSS-AQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVG 687
IR R ++ + S+ ++ A+ P LYDHRP ++N DDY+RVC IPKRKGANFRDL GV V
Sbjct: 647 IRSPREEMFDTSTMSKPATHP--LYDHRPLELNTDDYQRVCQIPKRKGANFRDLSGVRVR 704
Query: 688 PDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR 747
PD +V WDP ++RV L+SGKPLVPDYAM F + SS+KPF RLWWDE V TVVTRA+PHN+
Sbjct: 705 PDKRVEWDPDVKRVYLESGKPLVPDYAMSFVNGSSSKPFARLWWDETVPTVVTRAEPHNQ 764
Query: 748 ILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+ HP QDRV+TIRENARLQGFPD Y+LFGPVKER
Sbjct: 765 AITHPEQDRVMTIRENARLQGFPDYYKLFGPVKER 799
>gi|449526100|ref|XP_004170052.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like, partial
[Cucumis sativus]
Length = 753
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/706 (60%), Positives = 544/706 (77%), Gaps = 26/706 (3%)
Query: 94 NEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKAR 153
++ EEV+QA HY+QA VD YNL DDA+VKAE DYI +I+E+FE+VDG+ YF A+
Sbjct: 1 DDSEEVIQALHHYSQAKVDNITYNLLDDAHVKAEGEEDDYICKIIEMFEAVDGQLYFTAQ 60
Query: 154 WFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPP 213
W+YRA+DTV+KD A L++ KRVF S+V DDNPL+C+V K IA + MD K+ +P
Sbjct: 61 WYYRAKDTVVKDHAHLINDKRVFFSEVRDDNPLDCLVKKLNIARIPLTMD--EKKNCLPS 118
Query: 214 CDLYYDMKYTLPHLTFLNINNESNRRDSDASSTISSETGSN------SPIG--------- 258
CD Y DM Y LP+ +F+ + + S+ SSTISS+ +N S IG
Sbjct: 119 CDFYCDMLYLLPYSSFVKLPTSEKKVGSETSSTISSDVDTNEACEVNSQIGDVTQAQQCC 178
Query: 259 QPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEA 318
+P+++LLDLYSGCGAMSTGLC+G +LSGV LVT+WA+D+N +AC+SL+FNHPET+VRNE
Sbjct: 179 KPDVALLDLYSGCGAMSTGLCLGGNLSGVNLVTKWAVDLNQYACESLRFNHPETQVRNEM 238
Query: 319 ADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFE 378
A+DFLSL+KEW LC+Y S+ + + ++ ++ ++E+EEE E+E+ +D+ E
Sbjct: 239 AEDFLSLVKEWEVLCKYCSLVKSKEPQQKYIDLFADEDEEENEDEKTEEDEEVF-----E 293
Query: 379 VERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSN 438
VE+++A+CYGDPN+TKK G++ KVRWKGYG EDTWEPI GLS CKEKLK+FVT GY+S
Sbjct: 294 VEKILAICYGDPNETKKRGLFLKVRWKGYGSDEDTWEPIDGLSNCKEKLKDFVTSGYKSK 353
Query: 439 ILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMEN 498
ILPLPGDVD ICGGPPCQG+SGFNRFRN + LED KN+QL+V+MD++EYL+PKYVLMEN
Sbjct: 354 ILPLPGDVDVICGGPPCQGISGFNRFRNKENPLEDEKNKQLVVYMDLVEYLRPKYVLMEN 413
Query: 499 VVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQY 558
VVDI+KF+ GFL RYA+GRL+SM+YQ R+G+MAAG+YGLPQFR+R+F+WGA+P +KLPQY
Sbjct: 414 VVDIVKFANGFLGRYALGRLISMNYQVRMGMMAAGAYGLPQFRMRMFMWGAQPTEKLPQY 473
Query: 559 PLPTHEIVARGVIPNEFQEIIVAY-ANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKY 617
PLPTH++V RGVIP EF+ +VAY ++ LEK +LL DAISDLP V N+E DE Y
Sbjct: 474 PLPTHDVVVRGVIPTEFEMNVVAYEEGHKDVHLEKKLLLEDAISDLPAVENDERRDEMPY 533
Query: 618 GTVARTEFQKYIRLRRHDVVNLSS-AQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGA 676
+TEFQ IR R ++ + S+ ++ A+ P LYDHRP ++N DDY+RVC IPKRKGA
Sbjct: 534 HEPPKTEFQHLIRSPREEMFDTSTMSKPATHP--LYDHRPLELNTDDYQRVCQIPKRKGA 591
Query: 677 NFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVN 736
NFRDL GV V PD +V WDP ++RV L+SGKPLVPDYAM F + SS+KPF RLWWDE V
Sbjct: 592 NFRDLSGVRVRPDKRVEWDPDVKRVYLESGKPLVPDYAMSFVNGSSSKPFARLWWDETVP 651
Query: 737 TVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
TVVTRA+PHN+ + HP QDRV+TIRENARLQGFPD Y+LFGPVKER
Sbjct: 652 TVVTRAEPHNQAITHPEQDRVMTIRENARLQGFPDYYKLFGPVKER 697
>gi|413919506|gb|AFW59438.1| DNA (cytosine-5)-methyltransferase 1 [Zea mays]
Length = 915
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/728 (56%), Positives = 518/728 (71%), Gaps = 36/728 (4%)
Query: 72 FVSPPVSADEALKRYPDRYKALN-----EEEEVLQARCHYTQASVDGCLYNLGDDAYVKA 126
F+ PV+ADEA +P RY +EEE L+ARCHY A VD +Y LGDD YVKA
Sbjct: 140 FIGSPVAADEARSNWPKRYGRSTAAKKPDEEEELKARCHYRSAKVDNVVYCLGDDVYVKA 199
Query: 127 EEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLV------DRKRVFLSDV 180
E DYI RI E FE D YF RWF+RAEDTVI L + D +RVFLS+
Sbjct: 200 GENEADYIGRITEFFEGTDQCHYFTCRWFFRAEDTVINSLVSISVDGHKHDPRRVFLSEE 259
Query: 181 EDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNINNESNRRD 240
++DN L+CI+SK KI V NMD +AK + I CDLYYDM Y++ + TF NI++E+ + D
Sbjct: 260 KNDNVLDCIISKVKIVHVDPNMDPKAKAQLIESCDLYYDMSYSVAYSTFANISSENGQSD 319
Query: 241 SDASSTISS-----ETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAI 295
SD +S ISS ET S+ P +LLDLYSGCG MSTGLC+GA+LSG+KL TRWA+
Sbjct: 320 SDTASGISSDDVDLETSSSMPTRT--ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAV 377
Query: 296 DINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEE 355
D N AC+SLK+NHP+T+VRNE AD+FL+LLKEWA LC+ + + D D N S E
Sbjct: 378 DFNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCKKY-VQDVDS------NLASSE 430
Query: 356 EEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWE 415
++ D+D+ + +EF VE+L+ +CYG ++ G+YFKV+W+GYGP EDTWE
Sbjct: 431 DQA--------DEDSPLDKDEFVVEKLVGICYGGSDREN--GIYFKVQWEGYGPEEDTWE 480
Query: 416 PIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIK 475
PI LS C +K+++FV +G++ ILPLPGDVD ICGGPPCQG+SGFNR+RN L+D K
Sbjct: 481 PIDNLSDCPQKIRDFVQEGHKRKILPLPGDVDVICGGPPCQGISGFNRYRNRDEPLKDEK 540
Query: 476 NRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSY 535
N+Q++ FMD++ YLKPKYVLMENVVDILKF+ G+L +YA+ LV+M YQ RLG+M AG Y
Sbjct: 541 NKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAGCY 600
Query: 536 GLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVL 595
GLPQFR+RVFLWGA LP+YPLPT+++V RG PN F + +VAY Q L+K +L
Sbjct: 601 GLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMVAYDETQKPSLKKALL 660
Query: 596 LSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMAS-RPSLLYDH 654
L DAISDLP V N++ D +YG +TEFQ+YIRL R D+++ S + A L DH
Sbjct: 661 LGDAISDLPKVQNHQPNDVMEYGGSPKTEFQRYIRLSRKDMLDWSFGEGAGPDEGKLLDH 720
Query: 655 RPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYA 714
+P ++NNDDYERV IP +KGANFRDL GV VG +N V WDP +ERV L SGKPLVPDYA
Sbjct: 721 QPLRLNNDDYERVQQIPVKKGANFRDLKGVRVGANNIVEWDPEIERVKLSSGKPLVPDYA 780
Query: 715 MKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQ 774
M F S KPFGRLWWDE V TVVTRA+PHN++++HP+Q RVLTIRENARLQGFPD Y+
Sbjct: 781 MSFIKGKSLKPFGRLWWDETVPTVVTRAEPHNQVIIHPTQARVLTIRENARLQGFPDYYR 840
Query: 775 LFGPVKER 782
LFGP+KE+
Sbjct: 841 LFGPIKEK 848
>gi|411012959|gb|AFV99136.1| CMT-type cytosine DNA-methyltransferase 3b [Malus x domestica]
Length = 1096
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/738 (57%), Positives = 529/738 (71%), Gaps = 32/738 (4%)
Query: 72 FVSPPVSADEALKRYPDRYKA----------LNEEEEVLQARCHYTQASVDGCLYNLGDD 121
F+ P+ +EA K+YP RY N++E+++QARCHYT+A VDG Y+L DD
Sbjct: 178 FLGEPMEDEEARKQYPKRYVGKKPKMNGQNNSNDDEDIIQARCHYTKALVDGINYDLYDD 237
Query: 122 AYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVE 181
A+ +E YI +IVE+FE++ G YF A+W+YR+ DTVIK V RVF SDV
Sbjct: 238 AHSGEKEEP--YICKIVEMFEAIGGLLYFTAQWYYRSRDTVIKHCTT-VACGRVFFSDVR 294
Query: 182 DDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNINNESNRRDS 241
DDNPLNC+V K I + N+D + K K+IP C+ Y D KY LP+ TF+N+ E+ + S
Sbjct: 295 DDNPLNCLVEKLHIVRLTLNVDEDLKSKSIPVCNYYCDTKYLLPYSTFVNLXAENMQTGS 354
Query: 242 DASST-------ISSETGSNSPIGQ---PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVT 291
D S+ + SE S P G+ E+ LLDLYSGCGAMSTGLC+GA L+ V LVT
Sbjct: 355 DDSTISVEDDVCLDSEVDSKLPNGERAKSEVRLLDLYSGCGAMSTGLCLGAHLANVNLVT 414
Query: 292 RWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQS--- 348
RWA+D N +ACKSL NHPET+VRNEAA+DFL++LK W KLC + + D + E
Sbjct: 415 RWAVDYNKYACKSLAQNHPETEVRNEAAEDFLTMLKAWRKLCMCLKLVENDNLEEDVDKS 474
Query: 349 -LNFMSEEEEEEEEEEEENDD-DANVPN--EEFEVERLIAVCYGDPNKTKKPGVYFKVRW 404
L+F +E++EEEEE+EE +D NV N E FEV+ +I VC+GDP KT+K G+YFK+ W
Sbjct: 475 ILDFFGKEDDEEEEEDEEEEDVSGNVKNDSEVFEVDCVIGVCFGDPKKTEKKGIYFKIHW 534
Query: 405 KGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRF 464
KGYGP EDTWEP+ L CK+ +K+F+T+GYR LPLPGDVD +CGGPPCQGVSGFNRF
Sbjct: 535 KGYGPXEDTWEPMNELEHCKQAIKKFITEGYRLKKLPLPGDVDVVCGGPPCQGVSGFNRF 594
Query: 465 RNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQ 524
RN ++ L D KN+QL V+MD++ YL PK+VLMENVVDILKF+ GFL RYA+GRLV M+YQ
Sbjct: 595 RNTESPLADDKNQQLEVYMDIVRYLXPKFVLMENVVDILKFADGFLGRYALGRLVDMNYQ 654
Query: 525 TRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYAN 584
R+G+MAAG+YGLPQFR+RVFLWGARP + LPQYPLPTH++V+RGV P +F+ VAY
Sbjct: 655 VRMGMMAAGAYGLPQFRMRVFLWGARPTEILPQYPLPTHDVVSRGVTPTQFEGNAVAYDE 714
Query: 585 NQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQM 644
QL K + L DAISDLP V NNE DE YG +TEFQ+ IRL + ++ S
Sbjct: 715 GHQTQLGKSLFLDDAISDLPAVANNEERDEMPYGVAPKTEFQRLIRLSKEYLMGTSKDN- 773
Query: 645 ASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLK 704
S ++LYDHRP Q+N DDY RVC +PKRKGA FRDLPGV V DNKV WDP + RV L
Sbjct: 774 -SIQNVLYDHRPLQLNPDDYARVCEVPKRKGACFRDLPGVRVRGDNKVEWDPEVPRVYLA 832
Query: 705 SGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENA 764
SGKPL+PDYAM F + SS+KPF RLWWDE V TVVTRA+PHN+ ++HP QDRVLTIRENA
Sbjct: 833 SGKPLIPDYAMSFVNGSSSKPFARLWWDETVPTVVTRAEPHNQAIMHPEQDRVLTIRENA 892
Query: 765 RLQGFPDCYQLFGPVKER 782
RLQGF D Y+L GP+KER
Sbjct: 893 RLQGFXDFYKLSGPIKER 910
>gi|162463785|ref|NP_001104978.1| DNA (cytosine-5)-methyltransferase 1 [Zea mays]
gi|75168496|sp|Q9AXT8.1|CMT1_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 1; AltName:
Full=Chromomethylase 1; AltName: Full=DNA cytosine
methyltransferase MET2a; AltName: Full=Zea
methyltransferase2; Short=Zmet2
gi|13021690|gb|AAK11516.1|AF243043_1 DNA cytosine methyltransferase MET2a [Zea mays]
gi|260749135|gb|ACX48824.1| chromomethylase [Zea mays]
Length = 912
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/728 (56%), Positives = 517/728 (71%), Gaps = 36/728 (4%)
Query: 72 FVSPPVSADEALKRYPDRYKALN-----EEEEVLQARCHYTQASVDGCLYNLGDDAYVKA 126
F+ PV+ADEA +P RY +EEE L+ARCHY A VD +Y LGDD YVKA
Sbjct: 137 FIGSPVAADEARSNWPKRYGRSTAAKKPDEEEELKARCHYRSAKVDNVVYCLGDDVYVKA 196
Query: 127 EEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLV------DRKRVFLSDV 180
E DYI RI E FE D YF RWF+RAEDTVI L + D +RVFLS+
Sbjct: 197 GENEADYIGRITEFFEGTDQCHYFTCRWFFRAEDTVINSLVSISVDGHKHDPRRVFLSEE 256
Query: 181 EDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNINNESNRRD 240
++DN L+CI+SK KI V NMD +AK + I CDLYYDM Y++ + TF NI++E+ +
Sbjct: 257 KNDNVLDCIISKVKIVHVDPNMDPKAKAQLIESCDLYYDMSYSVAYSTFANISSENGQSG 316
Query: 241 SDASSTISS-----ETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAI 295
SD +S ISS ET S+ P +LLDLYSGCG MSTGLC+GA+LSG+KL TRWA+
Sbjct: 317 SDTASGISSDDVDLETSSSMPTRT--ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAV 374
Query: 296 DINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEE 355
D N AC+SLK+NHP+T+VRNE AD+FL+LLKEWA LC+ + + D D N S E
Sbjct: 375 DFNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCKKY-VQDVDS------NLASSE 427
Query: 356 EEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWE 415
++ D+D+ + +EF VE+L+ +CYG ++ G+YFKV+W+GYGP EDTWE
Sbjct: 428 DQA--------DEDSPLDKDEFVVEKLVGICYGGSDREN--GIYFKVQWEGYGPEEDTWE 477
Query: 416 PIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIK 475
PI LS C +K++EFV +G++ ILPLPGDVD ICGGPPCQG+SGFNR+RN L+D K
Sbjct: 478 PIDNLSDCPQKIREFVQEGHKRKILPLPGDVDVICGGPPCQGISGFNRYRNRDEPLKDEK 537
Query: 476 NRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSY 535
N+Q++ FMD++ YLKPKYVLMENVVDILKF+ G+L +YA+ LV+M YQ RLG+M AG Y
Sbjct: 538 NKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAGCY 597
Query: 536 GLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVL 595
GLPQFR+RVFLWGA LP+YPLPT+++V RG PN F + +VAY Q L+K +L
Sbjct: 598 GLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMVAYDETQKPSLKKALL 657
Query: 596 LSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMAS-RPSLLYDH 654
L DAISDLP V N++ D +YG +TEFQ+YIRL R D+++ S + A L DH
Sbjct: 658 LGDAISDLPKVQNHQPNDVMEYGGSPKTEFQRYIRLSRKDMLDWSFGEGAGPDEGKLLDH 717
Query: 655 RPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYA 714
+P ++NNDDYERV IP +KGANFRDL GV VG +N V WDP +ERV L SGKPLVPDYA
Sbjct: 718 QPLRLNNDDYERVQQIPVKKGANFRDLKGVRVGANNIVEWDPEIERVKLSSGKPLVPDYA 777
Query: 715 MKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQ 774
M F S KPFGRLWWDE V TVVTRA+PHN++++HP+Q RVLTIRENARLQGFPD Y+
Sbjct: 778 MSFIKGKSLKPFGRLWWDETVPTVVTRAEPHNQVIIHPTQARVLTIRENARLQGFPDYYR 837
Query: 775 LFGPVKER 782
LFGP+KE+
Sbjct: 838 LFGPIKEK 845
>gi|409107274|pdb|4FT2|A Chain A, Crystal Structure Of Zea Mays Zmet2 In Complex
H3(1-15)k9me2 Peptide And Sah
gi|409107275|pdb|4FT2|B Chain B, Crystal Structure Of Zea Mays Zmet2 In Complex
H3(1-15)k9me2 Peptide And Sah
gi|409107277|pdb|4FT4|B Chain B, Crystal Structure Of Zea Mays Zmet2 In Complex
H3(1-32)k9me2 Peptide And Sah
gi|409107278|pdb|4FT4|A Chain A, Crystal Structure Of Zea Mays Zmet2 In Complex
H3(1-32)k9me2 Peptide And Sah
Length = 784
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/728 (56%), Positives = 517/728 (71%), Gaps = 36/728 (4%)
Query: 72 FVSPPVSADEALKRYPDRYKALN-----EEEEVLQARCHYTQASVDGCLYNLGDDAYVKA 126
F+ PV+ADEA +P RY +EEE L+ARCHY A VD +Y LGDD YVKA
Sbjct: 9 FIGSPVAADEARSNWPKRYGRSTAAKKPDEEEELKARCHYRSAKVDNVVYCLGDDVYVKA 68
Query: 127 EEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLV------DRKRVFLSDV 180
E DYI RI E FE D YF RWF+RAEDTVI L + D +RVFLS+
Sbjct: 69 GENEADYIGRITEFFEGTDQCHYFTCRWFFRAEDTVINSLVSISVDGHKHDPRRVFLSEE 128
Query: 181 EDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNINNESNRRD 240
++DN L+CI+SK KI V NMD +AK + I CDLYYDM Y++ + TF NI++E+ +
Sbjct: 129 KNDNVLDCIISKVKIVHVDPNMDPKAKAQLIESCDLYYDMSYSVAYSTFANISSENGQSG 188
Query: 241 SDASSTISS-----ETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAI 295
SD +S ISS ET S+ P +LLDLYSGCG MSTGLC+GA+LSG+KL TRWA+
Sbjct: 189 SDTASGISSDDVDLETSSSMPTRT--ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAV 246
Query: 296 DINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEE 355
D N AC+SLK+NHP+T+VRNE AD+FL+LLKEWA LC+ + + D D N S E
Sbjct: 247 DFNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCKKY-VQDVDS------NLASSE 299
Query: 356 EEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWE 415
++ D+D+ + +EF VE+L+ +CYG ++ G+YFKV+W+GYGP EDTWE
Sbjct: 300 DQA--------DEDSPLDKDEFVVEKLVGICYGGSDREN--GIYFKVQWEGYGPEEDTWE 349
Query: 416 PIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIK 475
PI LS C +K++EFV +G++ ILPLPGDVD ICGGPPCQG+SGFNR+RN L+D K
Sbjct: 350 PIDNLSDCPQKIREFVQEGHKRKILPLPGDVDVICGGPPCQGISGFNRYRNRDEPLKDEK 409
Query: 476 NRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSY 535
N+Q++ FMD++ YLKPKYVLMENVVDILKF+ G+L +YA+ LV+M YQ RLG+M AG Y
Sbjct: 410 NKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAGCY 469
Query: 536 GLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVL 595
GLPQFR+RVFLWGA LP+YPLPT+++V RG PN F + +VAY Q L+K +L
Sbjct: 470 GLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMVAYDETQKPSLKKALL 529
Query: 596 LSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMAS-RPSLLYDH 654
L DAISDLP V N++ D +YG +TEFQ+YIRL R D+++ S + A L DH
Sbjct: 530 LGDAISDLPKVQNHQPNDVMEYGGSPKTEFQRYIRLSRKDMLDWSFGEGAGPDEGKLLDH 589
Query: 655 RPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYA 714
+P ++NNDDYERV IP +KGANFRDL GV VG +N V WDP +ERV L SGKPLVPDYA
Sbjct: 590 QPLRLNNDDYERVQQIPVKKGANFRDLKGVRVGANNIVEWDPEIERVKLSSGKPLVPDYA 649
Query: 715 MKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQ 774
M F S KPFGRLWWDE V TVVTRA+PHN++++HP+Q RVLTIRENARLQGFPD Y+
Sbjct: 650 MSFIKGKSLKPFGRLWWDETVPTVVTRAEPHNQVIIHPTQARVLTIRENARLQGFPDYYR 709
Query: 775 LFGPVKER 782
LFGP+KE+
Sbjct: 710 LFGPIKEK 717
>gi|242077178|ref|XP_002448525.1| hypothetical protein SORBIDRAFT_06g028430 [Sorghum bicolor]
gi|241939708|gb|EES12853.1| hypothetical protein SORBIDRAFT_06g028430 [Sorghum bicolor]
Length = 913
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/742 (55%), Positives = 519/742 (69%), Gaps = 31/742 (4%)
Query: 56 RVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALN-----EEEEVLQARCHYTQAS 110
RV +++ D + FV V A EA +P RY+ EE+E L A+CHY A
Sbjct: 122 RVGRRSAAAGGDHEPEFVGNAVPAAEARSNWPKRYERSTAAKKPEEDEELNAKCHYRSAK 181
Query: 111 VDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACL- 169
VD +Y LGDD YVKA E DYI RI E FE D YF RWF+RAEDTVI L +
Sbjct: 182 VDNVVYCLGDDVYVKAGENEADYIGRITEFFEGTDRCHYFTCRWFFRAEDTVINSLVSIN 241
Query: 170 -----VDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTL 224
D +RVFLS+ ++DN L+CI+SK KI V NMD +AK + I CDLYYDM Y++
Sbjct: 242 VDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKAQLIEHCDLYYDMSYSV 301
Query: 225 PHLTFLNINNESNRRDSDASSTISSE-TGSNSPIGQPE--MSLLDLYSGCGAMSTGLCIG 281
+ TF NI++E+ + S+ +S ISS+ +P PE +LLDLYSGCG MSTGLC+G
Sbjct: 302 AYSTFANISSENGQSGSETASGISSDDVDLEAPSSMPERTATLLDLYSGCGGMSTGLCLG 361
Query: 282 ASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDT 341
A+LSG+KL TRWA+D+N AC+SLK+NHP+T+VRNE AD+FL+LLKEWA LC+ + D
Sbjct: 362 AALSGLKLETRWAVDLNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCEKYVHQDV 421
Query: 342 DKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFK 401
D N E++E+E + D EF VE+LI +CYG +K G+YFK
Sbjct: 422 DS------NLAGSEDQEDEGSPLDKD--------EFVVEKLIGICYG--GSGRKDGIYFK 465
Query: 402 VRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGF 461
V+W+GYGP EDTWEPI LS C K++EFV +G+R ILPLPGDVD ICGGPPCQG+SGF
Sbjct: 466 VQWEGYGPEEDTWEPIDNLSDCPLKIREFVQEGHRRRILPLPGDVDVICGGPPCQGISGF 525
Query: 462 NRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSM 521
NRFRN L+D KN+Q++ FMD++ YLKPKYVLMENVVDILKF+ G+L +YA+ LV+M
Sbjct: 526 NRFRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAM 585
Query: 522 DYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVA 581
YQ RLG+M AG YGLPQFR+RVFLWGA LP+YPLPT+++V RG PN F + +VA
Sbjct: 586 KYQARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGNTPNAFSQCMVA 645
Query: 582 YANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSS 641
Y Q L+K +LL DAISDLP V N++ ++ +YG +TEFQ+YIRL R D+++ S
Sbjct: 646 YDEKQKPHLKKALLLGDAISDLPKVENHQPKEVMEYGGSPKTEFQRYIRLSRKDMLDWSF 705
Query: 642 AQMAS-RPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMER 700
+ A L DH+P ++NNDDYERV IP +KGANFRDL GV VG +N V WDP +ER
Sbjct: 706 GEEAGPDKGKLLDHQPLRLNNDDYERVQQIPVKKGANFRDLKGVKVGANNIVEWDPEIER 765
Query: 701 VMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTI 760
V L SGKPLVPDYAM F S KPFGRLWWDE V TVVTRA+PHN+I+LHP+Q RVLTI
Sbjct: 766 VKLSSGKPLVPDYAMSFIKGKSLKPFGRLWWDETVPTVVTRAEPHNQIILHPTQARVLTI 825
Query: 761 RENARLQGFPDCYQLFGPVKER 782
RENARLQGFPD Y+LFGP+KE+
Sbjct: 826 RENARLQGFPDYYRLFGPIKEK 847
>gi|297746421|emb|CBI16477.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 828 bits (2140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/769 (54%), Positives = 533/769 (69%), Gaps = 63/769 (8%)
Query: 67 DSDLFFVSPPVSADEALKRYPDRYK----------ALNEEEEVLQARCHYTQASVDG-CL 115
+ D V + +EA +R+P+RY+ ++ EE+++ARCHY QA +DG +
Sbjct: 8 EGDCRLVGEVIPDEEARQRWPERYEPKVYRNWFCSTKDDSEEIVKARCHYRQAEIDGRVI 67
Query: 116 YNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRV 175
NL DDA+VKA + A YI +IVELF ++DG PYF A+WFYRA DTVIKD A L+D KRV
Sbjct: 68 VNLNDDAHVKAGDNADHYICKIVELFVALDGTPYFTAQWFYRARDTVIKDHANLIDNKRV 127
Query: 176 FLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNINNE 235
F S++ DDNPL+C+V K IA V N+DLEA++ I CD YYDM Y L + +F+ + E
Sbjct: 128 FFSEMRDDNPLDCLVQKLNIARVPHNLDLEARKLAISSCDYYYDMLYLLDYSSFIKLPPE 187
Query: 236 SNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAI 295
+N S E EM+LLDLYSGCGAMS+GLC+GA +SGV LVTRWAI
Sbjct: 188 NN----------SEEVSQARERSLSEMTLLDLYSGCGAMSSGLCLGAKMSGVNLVTRWAI 237
Query: 296 DINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSI---------------YD 340
DIN +AC+S++ NHPET+VRNE+A+DFL+LL+EW KLC F + +
Sbjct: 238 DINAYACESVRLNHPETQVRNESAEDFLALLREWEKLCCKFLVTSENAFKMKNHMYGNHS 297
Query: 341 TDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYG---DPNKTKKPG 397
++V E ++ + ++E N D++ + I +C N
Sbjct: 298 LERVIEVAITVILKDEIIHLCGIFYNFDNSVCQTFKTFNFAFINLCISRLWRKNVKNLTH 357
Query: 398 VYFK-----------------------VRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKG 434
VYF VRWKGYGPS D+WEP +GL C E +K+FVT+G
Sbjct: 358 VYFNIYLLIIILILFSYFLFSMKLFIYVRWKGYGPSADSWEPFEGLGNCCESIKDFVTEG 417
Query: 435 YRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYV 494
Y+S ILPLPGDVD ICGGPPCQG+SGFNRFRN + LED KN+QL+VFMDV+ YLKP++V
Sbjct: 418 YKSKILPLPGDVDVICGGPPCQGISGFNRFRNKENPLEDPKNKQLVVFMDVVNYLKPRFV 477
Query: 495 LMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKK 554
LMENVVDI+KF+GG+L RYA+GRL+ M+YQTR+G+MAAG+YGLPQFR+RVF+WGAR +
Sbjct: 478 LMENVVDIVKFAGGYLGRYALGRLIGMNYQTRMGMMAAGAYGLPQFRMRVFMWGARFEEV 537
Query: 555 LPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPC-QLEKGVLLSDAISDLPLVTNNESED 613
LPQYPLPTH+++ RGVIP EF+ VAY +LE +LL+DAISDLP VTN+E+ D
Sbjct: 538 LPQYPLPTHDVIIRGVIPLEFEMNTVAYDEGHKFDELETKLLLADAISDLPPVTNDEARD 597
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E YG +TEFQ++IRLR+++++ S ++ + LYDHRP ++N DDY+RVC IPK
Sbjct: 598 EMPYGKAPQTEFQRFIRLRKNEMLGTSPSESNPSGNKLYDHRPLELNADDYQRVCQIPKT 657
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDE 733
KGANFRDLPGVLVG DNKV WDP++ER+ L SGKPLVPDYAM F SS+KPFGRLWWDE
Sbjct: 658 KGANFRDLPGVLVGADNKVEWDPNVERIYLPSGKPLVPDYAMSFVGGSSSKPFGRLWWDE 717
Query: 734 IVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
V TVVTRA+PHN+++LHP QDRVL+IRENARLQGFPD YQL GPVKER
Sbjct: 718 TVPTVVTRAEPHNQVILHPEQDRVLSIRENARLQGFPDYYQLRGPVKER 766
>gi|224057130|ref|XP_002299134.1| DNA methyltransferase [Populus trichocarpa]
gi|222846392|gb|EEE83939.1| DNA methyltransferase [Populus trichocarpa]
Length = 973
Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/745 (56%), Positives = 535/745 (71%), Gaps = 45/745 (6%)
Query: 72 FVSPPVSADEALKRYPDRY--------------KALNEEEEVLQARCHYTQASVDGCLYN 117
FV V EA K++P RY +L++ EE+++ARCHY +A VDG +YN
Sbjct: 185 FVGNQVPDAEARKKWPHRYANKIKNKTPISKPSNSLDDSEEIIKARCHYKRAEVDGIIYN 244
Query: 118 LGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFL 177
L DDA+V+A +G DYI RI+E+FES D P+F A+W+YR+ DT+IKD + D K VF
Sbjct: 245 LYDDAHVQASDGEADYICRIIEMFESEDRTPHFTAQWYYRSTDTIIKD-KYISDPKCVFF 303
Query: 178 SDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNINNESN 237
S++ +DNPL+C+ K KI +A +D E ++ CD Y DM Y LP+ TF+ + +E+N
Sbjct: 304 SEIRNDNPLDCLTRKLKIVRLALGVDSETRRAKTLNCDFYCDMLYLLPYSTFVKLPSENN 363
Query: 238 RRDSDASSTISS------------ETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLS 285
++SSTISS E +S + E++LLDLYSGCGAMSTGLC+GA+LS
Sbjct: 364 TTAPESSSTISSDIDAAGVKFECDEVCESSGRRKSEVALLDLYSGCGAMSTGLCLGANLS 423
Query: 286 GVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVP 345
G+ LVT+WA+D+N HAC+SL+ NHPET+VRNE A+DFL LLKEW KLC FS+ D P
Sbjct: 424 GLNLVTKWAVDLNKHACESLRLNHPETQVRNETAEDFLMLLKEWEKLCIRFSLVKNDD-P 482
Query: 346 E--QSLNF-----MSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTK-KPG 397
E Q+ +F +++EEEE+++ + D N +E FEVE+++ VC+GDP + +
Sbjct: 483 EKQQTYSFDMDDEDDDDDEEEEDDDNNDVSDNNDDSEVFEVEKILEVCHGDPKEIGGQRD 542
Query: 398 VYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQG 457
+YFKV WK YGP DTWEPI GLS C+E +K+FV GY+SNILPLPGDV+ ICGGPPCQG
Sbjct: 543 LYFKVSWKNYGPDYDTWEPISGLSNCREAIKKFVMHGYKSNILPLPGDVEVICGGPPCQG 602
Query: 458 VSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGR 517
+SGFNRFRN + LED KN+QL+VFMD++++LKPK+VLMENVVD+LKF+ GFL RYA+G
Sbjct: 603 ISGFNRFRNVKNPLEDPKNKQLVVFMDIVDFLKPKFVLMENVVDLLKFADGFLGRYAMGC 662
Query: 518 LVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQE 577
LVSM YQ RLG++AAG+YGLPQFR+RVFLWGA +KLPQYPLPTH+++ RGV+P EF+
Sbjct: 663 LVSMKYQARLGMLAAGAYGLPQFRMRVFLWGACATEKLPQYPLPTHDVLVRGVVPLEFEG 722
Query: 578 IIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVV 637
VAY QLE+ + L DAISDLP V N+E DE YG +TEFQ+ IRL++ +
Sbjct: 723 NTVAYEEGVKPQLERKLFLEDAISDLPAVANDEKRDEMPYGESPKTEFQRMIRLKKMGL- 781
Query: 638 NLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPS 697
LL+DHRP ++N+DDY+RVC IPKRKG NFRDLPGV V PD KV WDP
Sbjct: 782 --------ELNDLLFDHRPLELNDDDYQRVCQIPKRKGGNFRDLPGVRVRPDKKVEWDPE 833
Query: 698 MERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRV 757
+ R L SGKPLVPDYAM F + SS+KPF RLWWDE V TVVTRA+PHN+ ++HP QDRV
Sbjct: 834 VPRQYLSSGKPLVPDYAMTFVNGSSSKPFARLWWDETVPTVVTRAEPHNQAIMHPEQDRV 893
Query: 758 LTIRENARLQGFPDCYQLFGPVKER 782
LTIRENARLQGFPD YQL GP+KER
Sbjct: 894 LTIRENARLQGFPDYYQLCGPIKER 918
>gi|75157426|sp|Q8LPU5.1|CMT3_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 3; AltName:
Full=Chromomethylase 3; AltName: Full=DNA
methyltransferase 105
gi|20977600|gb|AAM28227.1| DNA methyltransferase 105 [Zea mays]
gi|414585461|tpg|DAA36032.1| TPA: DNA (cytosine-5)-methyltransferase 2 [Zea mays]
Length = 915
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/744 (55%), Positives = 519/744 (69%), Gaps = 36/744 (4%)
Query: 56 RVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRYK---ALN--EEEEVLQARCHYTQAS 110
RV +++ D F+ PV+A EA +P RY+ A N EE++ L+ARCHY A
Sbjct: 125 RVGRRSAAASGDHVPEFIGSPVAAAEAHSNWPKRYERSTAANKPEEDDELKARCHYRSAK 184
Query: 111 VDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACL- 169
VD +Y LGDD YVKA E DYI RI E FE D YF RWF+RAEDTVI L +
Sbjct: 185 VDNIVYCLGDDVYVKAGENEADYIGRITEFFEGTDRCHYFTCRWFFRAEDTVINSLVSIN 244
Query: 170 -----VDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTL 224
D +RVFLS+ ++DN L+CI+SK KI V NMD +AK + I CDLYYDM Y++
Sbjct: 245 VDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKAQLIEHCDLYYDMSYSV 304
Query: 225 PHLTFLNINNESNRRDSDASSTISS-----ETGSNSPIGQPEMSLLDLYSGCGAMSTGLC 279
+ TF NI++E+ + S+ +S ISS ET SN P + +LLDLYSGCG MSTGLC
Sbjct: 305 AYSTFANISSENGQSGSETASGISSDDAGLETSSNMP--ERTATLLDLYSGCGGMSTGLC 362
Query: 280 IGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIY 339
+GA+LSG+KL TRWA+D+N AC+SLK+NHP+T+VRNE AD+FL+LLKEWA LC+ +
Sbjct: 363 LGAALSGLKLETRWAVDLNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCEKYVHQ 422
Query: 340 DTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVY 399
D D N E++E+ + + +EF V++LI + Y + K GVY
Sbjct: 423 DVDS------NLAGSEDQEDAD---------TLDKDEFVVQKLIGIRYDGTGRKK--GVY 465
Query: 400 FKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVS 459
FKV+W+GYGP EDTWEPI LS C K++EFV +G + ILPLPGDVD ICGGPPCQG+S
Sbjct: 466 FKVQWEGYGPEEDTWEPIDNLSDCPLKIREFVQEGRKRKILPLPGDVDVICGGPPCQGIS 525
Query: 460 GFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLV 519
GFNRFRN L+D KN+Q++ FMD++ YLKPKYVLMENVVDILKF+ G+L +YA+ LV
Sbjct: 526 GFNRFRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLV 585
Query: 520 SMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEII 579
+M YQ RLG+M AG YGLPQFR+RVFLWGA LP+YPLPT+++V RG PN F + +
Sbjct: 586 AMKYQARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCM 645
Query: 580 VAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNL 639
VAY Q L+K +LL DA SDLP V N++ D +YG +TEFQ+YIRL R D+++
Sbjct: 646 VAYDETQRPSLKKALLLGDAFSDLPKVENHQPNDVMEYGGSPKTEFQRYIRLGRKDMLDW 705
Query: 640 SSAQMAS-RPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSM 698
S + A L DH+P ++NNDDYERV IP +KGANFRDL GV VG +N V WDP +
Sbjct: 706 SFGEEAGPDEGKLLDHQPLRLNNDDYERVKQIPVKKGANFRDLKGVKVGANNVVEWDPEV 765
Query: 699 ERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVL 758
ERV L SGKPLVPDYAM F S KPFGRLWWDE V TVVTRA+PHN+++LHP+Q RVL
Sbjct: 766 ERVYLSSGKPLVPDYAMSFIKGKSLKPFGRLWWDETVPTVVTRAEPHNQVILHPTQARVL 825
Query: 759 TIRENARLQGFPDCYQLFGPVKER 782
TIRENARLQGFPD Y+LFGP+KE+
Sbjct: 826 TIRENARLQGFPDYYRLFGPIKEK 849
>gi|414585462|tpg|DAA36033.1| TPA: hypothetical protein ZEAMMB73_314017 [Zea mays]
Length = 849
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/744 (55%), Positives = 519/744 (69%), Gaps = 36/744 (4%)
Query: 56 RVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRYK---ALN--EEEEVLQARCHYTQAS 110
RV +++ D F+ PV+A EA +P RY+ A N EE++ L+ARCHY A
Sbjct: 125 RVGRRSAAASGDHVPEFIGSPVAAAEAHSNWPKRYERSTAANKPEEDDELKARCHYRSAK 184
Query: 111 VDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACL- 169
VD +Y LGDD YVKA E DYI RI E FE D YF RWF+RAEDTVI L +
Sbjct: 185 VDNIVYCLGDDVYVKAGENEADYIGRITEFFEGTDRCHYFTCRWFFRAEDTVINSLVSIN 244
Query: 170 -----VDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTL 224
D +RVFLS+ ++DN L+CI+SK KI V NMD +AK + I CDLYYDM Y++
Sbjct: 245 VDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKAQLIEHCDLYYDMSYSV 304
Query: 225 PHLTFLNINNESNRRDSDASSTISS-----ETGSNSPIGQPEMSLLDLYSGCGAMSTGLC 279
+ TF NI++E+ + S+ +S ISS ET SN P + +LLDLYSGCG MSTGLC
Sbjct: 305 AYSTFANISSENGQSGSETASGISSDDAGLETSSNMP--ERTATLLDLYSGCGGMSTGLC 362
Query: 280 IGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIY 339
+GA+LSG+KL TRWA+D+N AC+SLK+NHP+T+VRNE AD+FL+LLKEWA LC+ +
Sbjct: 363 LGAALSGLKLETRWAVDLNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCEKYVHQ 422
Query: 340 DTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVY 399
D D N E++E+ + + +EF V++LI + Y + K GVY
Sbjct: 423 DVDS------NLAGSEDQEDAD---------TLDKDEFVVQKLIGIRYDGTGRKK--GVY 465
Query: 400 FKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVS 459
FKV+W+GYGP EDTWEPI LS C K++EFV +G + ILPLPGDVD ICGGPPCQG+S
Sbjct: 466 FKVQWEGYGPEEDTWEPIDNLSDCPLKIREFVQEGRKRKILPLPGDVDVICGGPPCQGIS 525
Query: 460 GFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLV 519
GFNRFRN L+D KN+Q++ FMD++ YLKPKYVLMENVVDILKF+ G+L +YA+ LV
Sbjct: 526 GFNRFRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLV 585
Query: 520 SMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEII 579
+M YQ RLG+M AG YGLPQFR+RVFLWGA LP+YPLPT+++V RG PN F + +
Sbjct: 586 AMKYQARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCM 645
Query: 580 VAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNL 639
VAY Q L+K +LL DA SDLP V N++ D +YG +TEFQ+YIRL R D+++
Sbjct: 646 VAYDETQRPSLKKALLLGDAFSDLPKVENHQPNDVMEYGGSPKTEFQRYIRLGRKDMLDW 705
Query: 640 SSAQMAS-RPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSM 698
S + A L DH+P ++NNDDYERV IP +KGANFRDL GV VG +N V WDP +
Sbjct: 706 SFGEEAGPDEGKLLDHQPLRLNNDDYERVKQIPVKKGANFRDLKGVKVGANNVVEWDPEV 765
Query: 699 ERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVL 758
ERV L SGKPLVPDYAM F S KPFGRLWWDE V TVVTRA+PHN+++LHP+Q RVL
Sbjct: 766 ERVYLSSGKPLVPDYAMSFIKGKSLKPFGRLWWDETVPTVVTRAEPHNQVILHPTQARVL 825
Query: 759 TIRENARLQGFPDCYQLFGPVKER 782
TIRENARLQGFPD Y+LFGP+KE+
Sbjct: 826 TIRENARLQGFPDYYRLFGPIKEK 849
>gi|162460714|ref|NP_001105167.1| DNA (cytosine-5)-methyltransferase 3 [Zea mays]
gi|75167623|sp|Q9ARI6.1|CMT2_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 2; AltName:
Full=Chromomethylase 2; AltName: Full=DNA cytosine
methyltransferase MET5; AltName: Full=Zea
methyltransferase5; Short=Zmet5
gi|13272199|gb|AAK15805.1| chromomethylase [Zea mays]
Length = 915
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/744 (55%), Positives = 517/744 (69%), Gaps = 36/744 (4%)
Query: 56 RVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRYK---ALN--EEEEVLQARCHYTQAS 110
RV +++ D F+ PV A EA +P RY+ A N EE++ L+ARCHY A
Sbjct: 125 RVGRRSAAASGDHVPEFIGSPVGAAEAHSNWPKRYERSTAANKPEEDDELKARCHYRSAK 184
Query: 111 VDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACL- 169
VD +Y LGDD YVKA E DYI RI E FE D YF RWF+RAEDTVI L +
Sbjct: 185 VDNIVYCLGDDVYVKAGENEADYIGRITEFFEGTDRCHYFTCRWFFRAEDTVINSLVSIN 244
Query: 170 -----VDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTL 224
D +RVFLS+ ++DN L+CI+SK KI V NMD +AK + I CDLYYDM Y++
Sbjct: 245 VDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKAQLIEHCDLYYDMSYSV 304
Query: 225 PHLTFLNINNESNRRDSDASSTISS-----ETGSNSPIGQPEMSLLDLYSGCGAMSTGLC 279
+ TF NI++E+ + S+ +S ISS ET SN P + +LLDLYSGCG MSTGLC
Sbjct: 305 AYSTFANISSENGQSGSETASGISSDDAGLETSSNMP--ERTATLLDLYSGCGGMSTGLC 362
Query: 280 IGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIY 339
+GA+LSG+KL TRWA+D+N AC+SLK+NHP+T+VRNE AD+FL+LLKEWA LC+ +
Sbjct: 363 LGAALSGLKLETRWAVDLNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCEKYVHQ 422
Query: 340 DTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVY 399
D D N E++E+ + + +EF V++LI + Y + K GVY
Sbjct: 423 DVDS------NLAGSEDQEDAD---------TLDKDEFVVQKLIGIRYDGTGRKK--GVY 465
Query: 400 FKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVS 459
FKV+W+ YGP EDTWEPI LS C K++EFV +G + ILPLPGDVD ICGGPPCQG+S
Sbjct: 466 FKVQWEEYGPEEDTWEPIDNLSDCPLKIREFVQEGRKRKILPLPGDVDVICGGPPCQGIS 525
Query: 460 GFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLV 519
GFNRFRN L+D KN+Q++ FMD++ YLKPKYVLMENVVDILKF+ G+L +YA+ LV
Sbjct: 526 GFNRFRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLV 585
Query: 520 SMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEII 579
+M YQ RLG+M AG YGLPQFR+RVFLWGA LP+YPLPT+++V RG PN F + +
Sbjct: 586 AMKYQARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCM 645
Query: 580 VAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNL 639
VAY Q L+K +LL DA SDLP V N++ D +YG +TEFQ+YIRL R D+++
Sbjct: 646 VAYDETQRPSLKKALLLGDAFSDLPKVENHQPNDVMEYGGSPKTEFQRYIRLGRKDMLDW 705
Query: 640 SSAQMAS-RPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSM 698
S + A L DH+P ++NNDDYERV IP +KGANFRDL GV VG +N V WDP +
Sbjct: 706 SFGEEAGPDEGKLLDHQPLRLNNDDYERVKQIPVKKGANFRDLKGVKVGANNVVEWDPEV 765
Query: 699 ERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVL 758
ERV L SGKPLVPDYAM F S KPFGRLWWD+ V TVVTRA+PHN+++LHP+Q RVL
Sbjct: 766 ERVYLSSGKPLVPDYAMSFIKGKSLKPFGRLWWDQTVPTVVTRAEPHNQVILHPTQARVL 825
Query: 759 TIRENARLQGFPDCYQLFGPVKER 782
TIRENARLQGFPD Y+LFGP+KE+
Sbjct: 826 TIRENARLQGFPDYYRLFGPIKEK 849
>gi|218188370|gb|EEC70797.1| hypothetical protein OsI_02246 [Oryza sativa Indica Group]
Length = 907
Score = 810 bits (2091), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/741 (55%), Positives = 512/741 (69%), Gaps = 44/741 (5%)
Query: 67 DSDLFFVSPPVSADEALKRYPDRYKA-----LNEEEEVLQARCHYTQASVDGCLYNLGDD 121
D D FV P A EA ++P RY+ +EEE ++ARCHY+ A VDG LY L DD
Sbjct: 120 DHDPEFVGDPFPAKEARDKWPQRYQRNAATRRPDEEEDIKARCHYSSAKVDGTLYCLHDD 179
Query: 122 AYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAC------LVDRKRV 175
YVKAEE DYI RI E FE D YF RWF+RAEDTVI + D KRV
Sbjct: 180 VYVKAEEDKADYIGRITEFFEGTDHCRYFTCRWFFRAEDTVISSIMMENADDEKHDLKRV 239
Query: 176 FLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNINNE 235
FLS+ ++DN L+CI+SK KI + NM+ EAK + + CDLYYDM YT+ + TF NI E
Sbjct: 240 FLSEEKNDNVLDCIISKVKIVHIDPNMESEAKARRLADCDLYYDMSYTVAYSTFANIPLE 299
Query: 236 SNRRDSDAS------------STISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGAS 283
+ SD + + S++ ++S +G+ +LLDLYSGCG MSTGLC+GA+
Sbjct: 300 NGASGSDTASDISSDDVDSSKGKVVSDSEASS-VGK--ATLLDLYSGCGGMSTGLCLGAA 356
Query: 284 LSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDK 343
L+G+ L TRWA+D N AC+SLK+NHP T+VRNE AD+FL+LLK W LC D+
Sbjct: 357 LAGLNLETRWAVDFNSFACESLKYNHPRTEVRNEKADEFLALLKGWHSLC--------DE 408
Query: 344 VPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVR 403
++ ++F S E EE DDD + +EF VE+L +CYG ++ G+YFKV+
Sbjct: 409 YVKKDIDFSSAGASENEE-----DDDEPLEKDEFVVEKLAGICYG--GSGREDGLYFKVQ 461
Query: 404 WKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNR 463
WKGYG EDTWEPI+ L C K+KEFV +GYR ILPLPGDVD ICGGPPCQG+SGFNR
Sbjct: 462 WKGYGREEDTWEPIENLRDCPLKIKEFVQEGYRRKILPLPGDVDVICGGPPCQGISGFNR 521
Query: 464 FRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDY 523
FRN + L+D KN+Q++ FMD++ YLKPKYVLMENVVDILKF+ G+L RYA+ RLV+M Y
Sbjct: 522 FRNRKEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGRYALSRLVAMKY 581
Query: 524 QTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYA 583
Q RLG+M AG YGLPQFR+RVFLWGA P LP+YPLPTH +V RG PN F + IVAY
Sbjct: 582 QARLGMMVAGCYGLPQFRMRVFLWGALPTMVLPKYPLPTHNVVVRGGAPNAFSQSIVAYD 641
Query: 584 NNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQ 643
Q L+ +LL DAISDLP V N++ + +YG+ +TEFQ+YIRL R ++++ SS +
Sbjct: 642 ETQKPTLKNALLLGDAISDLPEVNNHQPNEVMEYGSSPKTEFQRYIRLSRKEMLD-SSFE 700
Query: 644 MASRPSL--LYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERV 701
P L L DH+P ++N DD+ERV IP +KGANFRDL GV VG +N V WDP + RV
Sbjct: 701 GKDGPDLGKLLDHQPLKLNKDDHERVQQIPVKKGANFRDLKGVRVGANNIVEWDPDVPRV 760
Query: 702 MLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIR 761
L SGKPLVPDYAM F S KPFGRLWWDE V TVVTRA+PHN+I+LHP+Q RVLT+R
Sbjct: 761 YLSSGKPLVPDYAMSFIKGRSLKPFGRLWWDETVPTVVTRAEPHNQIILHPNQARVLTVR 820
Query: 762 ENARLQGFPDCYQLFGPVKER 782
ENARLQGFPD Y++FGP+KE+
Sbjct: 821 ENARLQGFPDYYKMFGPIKEK 841
>gi|226088548|dbj|BAH37019.1| chromomethylase OsMET2a [Oryza sativa Japonica Group]
Length = 907
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/741 (55%), Positives = 512/741 (69%), Gaps = 44/741 (5%)
Query: 67 DSDLFFVSPPVSADEALKRYPDRYKA-----LNEEEEVLQARCHYTQASVDGCLYNLGDD 121
D D FV P A EA ++P RY+ +EEE ++ARCHY+ A VDG LY L DD
Sbjct: 120 DHDPEFVGDPFPAKEARDKWPQRYQRNAATRRPDEEEDIKARCHYSSAKVDGTLYCLHDD 179
Query: 122 AYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAC------LVDRKRV 175
YVKAEE DYI RI E FE D YF RWF+RAEDTVI + D KRV
Sbjct: 180 VYVKAEEDKADYIGRITEFFEGTDHCHYFTCRWFFRAEDTVISSIMMENADDEKHDLKRV 239
Query: 176 FLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNINNE 235
FLS+ ++DN L+CI+SK KI + NM+ EAK + + CDLYYDM YT+ + TF NI E
Sbjct: 240 FLSEEKNDNVLDCIISKVKIVYIDPNMESEAKARRLADCDLYYDMSYTVAYSTFANIPLE 299
Query: 236 SNRRDSDAS------------STISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGAS 283
+ SD + + S++ ++S +G+ +LLDLYSGCG MSTGLC+GA+
Sbjct: 300 NGASGSDTASDISSDDVDSSKGKVVSDSEASS-VGK--ATLLDLYSGCGGMSTGLCLGAA 356
Query: 284 LSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDK 343
L+G+ L TRWA+D N AC+SLK+NHP T+VRNE AD+FL+LLK W LC D+
Sbjct: 357 LAGLNLETRWAVDFNSFACESLKYNHPRTEVRNEKADEFLALLKGWHSLC--------DE 408
Query: 344 VPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVR 403
++ ++F S E EE DDD + +EF VE+L +CYG ++ G+YFKV+
Sbjct: 409 YVKKDIDFSSAGASENEE-----DDDEPLEKDEFVVEKLAGICYG--GSGREDGLYFKVQ 461
Query: 404 WKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNR 463
WKGYG EDTWEPI+ L C K+KEFV +GYR ILPLPGDVD ICGGPPCQG+SGFNR
Sbjct: 462 WKGYGREEDTWEPIENLRDCPLKIKEFVQEGYRRKILPLPGDVDVICGGPPCQGISGFNR 521
Query: 464 FRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDY 523
FRN + L+D KN+Q++ FMD++ YLKPKYVLMENVVDILKF+ G+L RYA+ RLV+M Y
Sbjct: 522 FRNRKEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGRYALSRLVAMKY 581
Query: 524 QTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYA 583
Q RLG+M AG YGLPQFR+RVFLWGA P LP+YPLPTH +V RG PN F + IVAY
Sbjct: 582 QARLGMMVAGCYGLPQFRMRVFLWGALPTMVLPKYPLPTHNVVVRGGAPNAFSQSIVAYD 641
Query: 584 NNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQ 643
Q L+ +LL DAISDLP V N++ + +YG+ +TEFQ+YIRL R ++++ SS +
Sbjct: 642 ETQKPTLKNALLLGDAISDLPEVNNHQPNEVMEYGSSPKTEFQRYIRLSRKEMLD-SSFE 700
Query: 644 MASRPSL--LYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERV 701
P L L DH+P ++N DD+ERV IP +KGANFRDL GV VG +N V WDP + RV
Sbjct: 701 GKDGPDLGKLLDHQPLKLNKDDHERVQQIPVKKGANFRDLKGVRVGANNIVEWDPDVPRV 760
Query: 702 MLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIR 761
L SGKPLVPDYAM F S KPFGRLWWDE V TVVTRA+PHN+I+LHP+Q RVLT+R
Sbjct: 761 YLSSGKPLVPDYAMSFIKGRSLKPFGRLWWDETVPTVVTRAEPHNQIILHPNQARVLTVR 820
Query: 762 ENARLQGFPDCYQLFGPVKER 782
ENARLQGFPD Y++FGP+KE+
Sbjct: 821 ENARLQGFPDYYKMFGPIKEK 841
>gi|222612319|gb|EEE50451.1| hypothetical protein OsJ_30466 [Oryza sativa Japonica Group]
Length = 907
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/741 (55%), Positives = 512/741 (69%), Gaps = 44/741 (5%)
Query: 67 DSDLFFVSPPVSADEALKRYPDRYKA-----LNEEEEVLQARCHYTQASVDGCLYNLGDD 121
D D FV P A EA ++P RY+ +EEE ++ARCHY+ A VDG LY L DD
Sbjct: 120 DHDPEFVGDPFPAKEARDKWPQRYQRNAATRRPDEEEDIKARCHYSSAKVDGTLYCLHDD 179
Query: 122 AYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAC------LVDRKRV 175
YVKAEE DYI RI E FE D YF RWF+RAEDTVI + D KRV
Sbjct: 180 VYVKAEEDKADYIGRITEFFEGTDHCHYFTCRWFFRAEDTVISSIMMENADDEKHDLKRV 239
Query: 176 FLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNINNE 235
FLS+ ++DN L+CI+SK KI + NM+ EAK + + CDLYYDM YT+ + TF NI E
Sbjct: 240 FLSEEKNDNVLDCIISKVKIVYIDPNMESEAKARRLADCDLYYDMSYTVAYSTFANIPLE 299
Query: 236 SNRRDSDAS------------STISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGAS 283
+ SD + + S++ ++S +G+ +LLDLYSGCG MSTGLC+GA+
Sbjct: 300 NGASGSDTASDISSDDVDSSKGKVVSDSEASS-VGK--ATLLDLYSGCGGMSTGLCLGAA 356
Query: 284 LSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDK 343
L+G+ L TRWA+D N AC+SLK+NHP T+VRNE AD+FL+LLK W LC D+
Sbjct: 357 LAGLNLETRWAVDFNSFACESLKYNHPRTEVRNEKADEFLALLKGWHSLC--------DE 408
Query: 344 VPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVR 403
++ ++F S E EE DDD + +EF VE+L +CYG ++ G+YFKV+
Sbjct: 409 YVKKDIDFSSAGASENEE-----DDDEPLEKDEFVVEKLAGICYG--GSGREDGLYFKVQ 461
Query: 404 WKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNR 463
WKGYG EDTWEPI+ L C K+KEFV +GYR ILPLPGDVD ICGGPPCQG+SGFNR
Sbjct: 462 WKGYGREEDTWEPIENLRDCPLKIKEFVQEGYRRKILPLPGDVDVICGGPPCQGISGFNR 521
Query: 464 FRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDY 523
FRN + L+D KN+Q++ FMD++ YLKPKYVLMENVVDILKF+ G+L RYA+ RLV+M Y
Sbjct: 522 FRNRKEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGRYALSRLVAMKY 581
Query: 524 QTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYA 583
Q RLG+M AG YGLPQFR+RVFLWGA P LP+YPLPTH +V RG PN F + IVAY
Sbjct: 582 QARLGMMVAGCYGLPQFRMRVFLWGALPTMVLPKYPLPTHNVVVRGGAPNAFSQSIVAYD 641
Query: 584 NNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQ 643
Q L+ +LL DAISDLP V N++ + +YG+ +TEFQ+YIRL R ++++ SS +
Sbjct: 642 ETQKPTLKNALLLGDAISDLPEVNNHQPNEVMEYGSSPKTEFQRYIRLSRKEMLD-SSFE 700
Query: 644 MASRPSL--LYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERV 701
P L L DH+P ++N DD+ERV IP +KGANFRDL GV VG +N V WDP + RV
Sbjct: 701 GKDGPDLGKLLDHQPLKLNKDDHERVQQIPVKKGANFRDLKGVRVGANNIVEWDPDVPRV 760
Query: 702 MLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIR 761
L SGKPLVPDYAM F S KPFGRLWWDE V TVVTRA+PHN+I+LHP+Q RVLT+R
Sbjct: 761 YLSSGKPLVPDYAMSFIKGRSLKPFGRLWWDETVPTVVTRAEPHNQIILHPNQARVLTVR 820
Query: 762 ENARLQGFPDCYQLFGPVKER 782
ENARLQGFPD Y++FGP+KE+
Sbjct: 821 ENARLQGFPDYYKMFGPIKEK 841
>gi|24421681|gb|AAN60988.1| Putative DNA cytosine methyltransferase MET2a [Oryza sativa
Japonica Group]
gi|108706955|gb|ABF94750.1| C-5 cytosine-specific DNA methylase family protein, expressed
[Oryza sativa Japonica Group]
Length = 1761
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/755 (53%), Positives = 515/755 (68%), Gaps = 39/755 (5%)
Query: 57 VKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRY---------KALNEEEEVLQARCHYT 107
+ T + DSD FV PV DEA +R+P RY K +E+E ++ARCHY
Sbjct: 220 ARPSTARRVEDSDDHFVGDPVPDDEARQRWPVRYSRKGSDSLLKQEPDEDEEMKARCHYL 279
Query: 108 QASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLA 167
A+VD +Y+L DD YVKA +YI RI E FE VD YF +WF+R DTVI
Sbjct: 280 AANVDDEIYHLDDDVYVKAGPDEENYIGRITEFFEGVDRGSYFSCQWFFRTADTVISSKL 339
Query: 168 CLV-----DRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKY 222
V + KRVFLS ++DN + CIVSK KIA V NM +A+ I CDLYYDM Y
Sbjct: 340 LKVHDHRHNHKRVFLSKEKNDNLIECIVSKVKIAHVDPNMTPQARAHAISDCDLYYDMSY 399
Query: 223 TLPHLTFLNINNESNRR-DSDASSTISSETGSNSPIGQ-------------PEMSLLDLY 268
++ + TF N+ +++ S+A+S IS + NS G+ SLLDLY
Sbjct: 400 SVAYSTFANLPADNDGALGSEATSNISCDDADNSSKGKLSADIVAPYSEQTETASLLDLY 459
Query: 269 SGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKE 328
SGCGAMSTGLC+G + SG+ L TRWA+DIN +AC LK NHP ++VRNE +DFL+L+++
Sbjct: 460 SGCGAMSTGLCLGFAFSGINLETRWAVDINKYACACLKHNHPYSQVRNEKTEDFLALIQQ 519
Query: 329 WAKLCQYFSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYG 388
W LC+ + ++ D + E S++ + ++ E +P + F+VE L+ +CYG
Sbjct: 520 WDALCRKYVVHKNDTL-EPSIDMPLNDADDVNEP---------LPEDIFDVEELLEICYG 569
Query: 389 DPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDF 448
DP+ T K G++FKVRWKGY PS DTWEPI GLS C E++KEFV KG++ NILPLPG VD
Sbjct: 570 DPSNTGKNGLWFKVRWKGYDPSYDTWEPIDGLSDCPERIKEFVEKGHKENILPLPGAVDV 629
Query: 449 ICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGG 508
ICGGPPCQG+SGFNRFR LED KN+QL+VFMD+++YL+PKYVLMENVVDILKF+ G
Sbjct: 630 ICGGPPCQGISGFNRFRKHNDPLEDEKNKQLVVFMDIVKYLRPKYVLMENVVDILKFADG 689
Query: 509 FLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVAR 568
FL RYA+ LV+M+YQ RLG+MAAG YGLPQFR+R FLWGA P LP++PLPTH+ V R
Sbjct: 690 FLGRYAMSCLVAMNYQARLGMMAAGYYGLPQFRMRAFLWGALPSMVLPKFPLPTHDAVVR 749
Query: 569 GVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKY 628
G++P F + +VAY L K +LL+DAISDLP V N++ +D +Y +TEFQ+Y
Sbjct: 750 GIVPTTFSQSVVAYNEVDTRCLRKALLLADAISDLPKVGNDQPKDVIEYSVAPKTEFQRY 809
Query: 629 IRLRRHDVVNLS-SAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVG 687
IR R D+ + S S L+DH+P ++N DDYERV IP +KGANFRDL GV+VG
Sbjct: 810 IRNNRKDIQDYSFRGDDPSEEGKLFDHQPLKLNKDDYERVQRIPVKKGANFRDLKGVIVG 869
Query: 688 PDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR 747
PDN VR DP++ R L SGKPLVPDYA+ F STKPFGRLWWDE V TVVTRA+PHN+
Sbjct: 870 PDNTVRLDPNISRERLSSGKPLVPDYAISFVKGKSTKPFGRLWWDETVPTVVTRAEPHNQ 929
Query: 748 ILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
I+LHPSQDRVLTIRENARLQGFPD Y+L GP+KE+
Sbjct: 930 IILHPSQDRVLTIRENARLQGFPDYYRLIGPLKEK 964
>gi|388890583|gb|AFK80345.1| chromomethylase 3 [Nicotiana benthamiana]
Length = 740
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/690 (57%), Positives = 500/690 (72%), Gaps = 11/690 (1%)
Query: 94 NEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKAR 153
++ + ++QA+CH+TQA VDG +YNLGDDAYV+A DYI +IVE F++VDG YF A+
Sbjct: 7 DDADHLIQAKCHFTQAVVDGQIYNLGDDAYVQASNDEDDYICKIVEFFQAVDGTQYFTAQ 66
Query: 154 WFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPP 213
WFYRA+DTVIK +D KRVF S+++DDNPL C+V K KI + +N+ L K+
Sbjct: 67 WFYRAKDTVIKAHDQFIDNKRVFFSEIKDDNPLGCLVKKIKIVPIPSNVRLPLKESLKSN 126
Query: 214 CDLYYDMKYTLPHLTFLNINNE-SNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCG 272
D YYDM Y LP+ +F+++ + S+ S+ S + + EM+LLDLYSGCG
Sbjct: 127 SDYYYDMMYLLPYSSFVSLPQDVSSPISESDSTISSDSDTVDVKEQKLEMNLLDLYSGCG 186
Query: 273 AMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKL 332
AMSTGLC+GA + GVKLVT+WA+D+N +AC SLK+NHPET VRNE+ADDFL LL EW +L
Sbjct: 187 AMSTGLCLGADIGGVKLVTKWAVDLNQYACDSLKWNHPETAVRNESADDFLLLLGEWRQL 246
Query: 333 CQYFSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNK 392
C S+ + L E+EE+ E+E+ + E FEVE L+ +CYGDP +
Sbjct: 247 CASCSLLRNNSPTHPFLKVRDEDEEDNNNEDEDEGSGDDEQGEIFEVEELLEICYGDPKE 306
Query: 393 TKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGG 452
KPG+YFKVRWKGYG EDTWEPI+G C+EK+K+FVTKG++++ILPLPG+V ICGG
Sbjct: 307 INKPGLYFKVRWKGYGQEEDTWEPIEGFDGCQEKIKDFVTKGFKASILPLPGEVAVICGG 366
Query: 453 PPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLAR 512
PPCQGVSGFNRFRN + L D KN+QL FMD++E+L P++VLMENVVD++KF+ GFL R
Sbjct: 367 PPCQGVSGFNRFRNSKNPLGDSKNKQLETFMDIVEFLNPRFVLMENVVDLVKFADGFLGR 426
Query: 513 YAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIP 572
YA+GRLV MDYQ R+G+M AG+YGLPQFR RVF+WGA P + LPQYPLPTH +V RG +P
Sbjct: 427 YALGRLVGMDYQARMGMMVAGAYGLPQFRRRVFMWGALPSENLPQYPLPTHNVVVRGGMP 486
Query: 573 NEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLR 632
EF+ +VAY + ++ L DAISDLP V N+E DE Y ++ FQ +IR R
Sbjct: 487 KEFELNVVAYDEALKSRAKERTFLKDAISDLPPVENDEPRDEMPYIDEPKSAFQHFIRSR 546
Query: 633 RHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKV 692
R + S+LYDHRP ++N DDYERVC IPKRKGANFRDLPGV V +N V
Sbjct: 547 RDGALG----------SVLYDHRPLRLNEDDYERVCQIPKRKGANFRDLPGVRVRANNTV 596
Query: 693 RWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHP 752
DP +ERV + SGKPLVPDYA+ F +STKPFGRLWWDEIV TVVTRA+PHN+++LHP
Sbjct: 597 ELDPDVERVKVASGKPLVPDYAITFVRGTSTKPFGRLWWDEIVPTVVTRAEPHNQVILHP 656
Query: 753 SQDRVLTIRENARLQGFPDCYQLFGPVKER 782
QDRVLTIRENARLQGFPD Y+L GP+KER
Sbjct: 657 EQDRVLTIRENARLQGFPDYYKLTGPIKER 686
>gi|218192371|gb|EEC74798.1| hypothetical protein OsI_10599 [Oryza sativa Indica Group]
Length = 1760
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/755 (53%), Positives = 515/755 (68%), Gaps = 39/755 (5%)
Query: 57 VKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRY---------KALNEEEEVLQARCHYT 107
+ T + DSD FV PV DEA +R+P RY K +E+E ++ARCHY
Sbjct: 220 ARPSTARRVEDSDDHFVGDPVPDDEARQRWPVRYSRKGSDSLLKQEPDEDEEMKARCHYL 279
Query: 108 QASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLA 167
A+VD +Y+L DD YVKA +YI RI E FE VD YF +WF+R DTVI
Sbjct: 280 AANVDDEIYHLDDDVYVKAGPDEENYIGRITEFFEGVDRGSYFSCQWFFRTADTVISSKL 339
Query: 168 CLV-----DRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKY 222
V + KRVFLS ++DN + CIVSK KIA V NM +A+ I CDLYYDM Y
Sbjct: 340 LKVHDHRHNHKRVFLSKEKNDNLIECIVSKVKIAHVDPNMTPQARAHAISDCDLYYDMSY 399
Query: 223 TLPHLTFLNINNESNRR-DSDASSTISSETGSNSPIGQ-------------PEMSLLDLY 268
++ + TF N+ +++ S+A+S IS + NS G+ SLLDLY
Sbjct: 400 SVAYSTFANLPADNDGALGSEATSNISCDDADNSSKGKLSADIVSPYSEQTETASLLDLY 459
Query: 269 SGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKE 328
SGCGAMSTGLC+G + SG+ L TRWA+DIN +AC SLK NHP ++VRNE +DFL+L+++
Sbjct: 460 SGCGAMSTGLCLGFAFSGINLETRWAVDINKYACASLKHNHPYSQVRNEKTEDFLALIQQ 519
Query: 329 WAKLCQYFSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYG 388
W LC+ + ++ + + E ++ + ++ E +P + F+VE L+ +CYG
Sbjct: 520 WDALCRKYVVHKNNTL-EPGIDMPLNDADDVNEP---------LPEDIFDVEELLEICYG 569
Query: 389 DPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDF 448
DP+ T K G++FKVRWKGY PS DTWEPI GLS C E++KEFV KG++ NILPLPG VD
Sbjct: 570 DPSNTGKNGLWFKVRWKGYDPSYDTWEPIDGLSDCPERIKEFVEKGHKDNILPLPGAVDV 629
Query: 449 ICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGG 508
ICGGPPCQG+SGFNRFR LED KN+QL+VFMD+++YL+PKYVLMENVVDILKF+ G
Sbjct: 630 ICGGPPCQGISGFNRFRKHNDPLEDEKNKQLVVFMDIVKYLRPKYVLMENVVDILKFADG 689
Query: 509 FLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVAR 568
FL RYA+ LV+M+YQ RLG+MAAG YGLPQFR+R FLWGA P LP++PLPTH+ V R
Sbjct: 690 FLGRYAMSCLVAMNYQARLGMMAAGYYGLPQFRMRAFLWGALPSMVLPKFPLPTHDAVVR 749
Query: 569 GVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKY 628
G++P F + +VAY L K +LL+DAISDLP V N++ +D +Y +TEFQ+Y
Sbjct: 750 GIVPTTFSQSVVAYNEVDTRCLRKALLLADAISDLPKVGNDQPKDVIEYSVAPKTEFQRY 809
Query: 629 IRLRRHDVVNLS-SAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVG 687
IR R D+ + S S L+DH+P ++N DDYERV IP +KGANFRDL GV+VG
Sbjct: 810 IRNNRKDIQDYSFRGDDPSEEGKLFDHQPLKLNKDDYERVQRIPVKKGANFRDLKGVIVG 869
Query: 688 PDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR 747
PDN VR DP++ R L SGKPLVPDYA+ F STKPFGRLWWDE V TVVTRA+PHN+
Sbjct: 870 PDNTVRLDPNISRERLSSGKPLVPDYAISFVKGKSTKPFGRLWWDETVPTVVTRAEPHNQ 929
Query: 748 ILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
I+LHPSQDRVLTIRENARLQGFPD Y+L GP+KE+
Sbjct: 930 IILHPSQDRVLTIRENARLQGFPDYYRLIGPLKEK 964
>gi|222624499|gb|EEE58631.1| hypothetical protein OsJ_09996 [Oryza sativa Japonica Group]
Length = 1033
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/757 (53%), Positives = 515/757 (68%), Gaps = 43/757 (5%)
Query: 57 VKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRY---------KALNEEEEVLQARCHYT 107
+ T + DSD FV PV DEA +R+P RY K +E+E ++ARCHY
Sbjct: 220 ARPSTARRVEDSDDHFVGDPVPDDEARQRWPVRYSRKGSDSLLKQEPDEDEEMKARCHYL 279
Query: 108 QASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLA 167
A+VD +Y+L DD YVKA +YI RI E FE VD YF +WF+R DTVI
Sbjct: 280 AANVDDEIYHLDDDVYVKAGPDEENYIGRITEFFEGVDRGSYFSCQWFFRTADTVISSKL 339
Query: 168 CLV-----DRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKY 222
V + KRVFLS ++DN + CIVSK KIA V NM +A+ I CDLYYDM Y
Sbjct: 340 LKVHDHRHNHKRVFLSKEKNDNLIECIVSKVKIAHVDPNMTPQARAHAISDCDLYYDMSY 399
Query: 223 TLPHLTFLNINNESNRR-DSDASSTISSETGSNSPIGQ-------------PEMSLLDLY 268
++ + TF N+ +++ S+A+S IS + NS G+ SLLDLY
Sbjct: 400 SVAYSTFANLPADNDGALGSEATSNISCDDADNSSKGKLSADIVAPYSEQTETASLLDLY 459
Query: 269 SGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKE 328
SGCGAMSTGLC+G + SG+ L TRWA+DIN +AC LK NHP ++VRNE +DFL+L+++
Sbjct: 460 SGCGAMSTGLCLGFAFSGINLETRWAVDINKYACACLKHNHPYSQVRNEKTEDFLALIQQ 519
Query: 329 WAKLCQYFSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDAN--VPNEEFEVERLIAVC 386
W LC+ + ++ D + E S++ + DD N +P + F+VE L+ +C
Sbjct: 520 WDALCRKYVVHKNDTL-EPSIDMPLNDA-----------DDVNEPLPEDIFDVEELLEIC 567
Query: 387 YGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDV 446
YGDP+ T K G++FKVRWKGY PS DTWEPI GLS C E++KEFV KG++ NILPLPG V
Sbjct: 568 YGDPSNTGKNGLWFKVRWKGYDPSYDTWEPIDGLSDCPERIKEFVEKGHKENILPLPGAV 627
Query: 447 DFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFS 506
D ICGGPPCQG+SGFNRFR LED KN+QL+VFMD+++YL+PKYVLMENVVDILKF+
Sbjct: 628 DVICGGPPCQGISGFNRFRKHNDPLEDEKNKQLVVFMDIVKYLRPKYVLMENVVDILKFA 687
Query: 507 GGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIV 566
GFL RYA+ LV+M+YQ RLG+MAAG YGLPQFR+R FLWGA P LP++PLPTH+ V
Sbjct: 688 DGFLGRYAMSCLVAMNYQARLGMMAAGYYGLPQFRMRAFLWGALPSMVLPKFPLPTHDAV 747
Query: 567 ARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQ 626
RG++P F + +VAY L K +LL+DAISDLP V N++ +D +Y +TEFQ
Sbjct: 748 VRGIVPTTFSQSVVAYNEVDTRCLRKALLLADAISDLPKVGNDQPKDVIEYSVAPKTEFQ 807
Query: 627 KYIRLRRHDVVNLS-SAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
+YIR R D+ + S S L+DH+P ++N DDYERV IP +KGANFRDL GV+
Sbjct: 808 RYIRNNRKDIQDYSFRGDDPSEEGKLFDHQPLKLNKDDYERVQRIPVKKGANFRDLKGVI 867
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPH 745
VGPDN VR DP++ R L SGKPLVPDYA+ F STKPFGRLWWDE V TVVTRA+PH
Sbjct: 868 VGPDNTVRLDPNISRERLSSGKPLVPDYAISFVKGKSTKPFGRLWWDETVPTVVTRAEPH 927
Query: 746 NRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
N+I+LHPSQDRVLTIRENARLQGFPD Y+L GP+KE+
Sbjct: 928 NQIILHPSQDRVLTIRENARLQGFPDYYRLIGPLKEK 964
>gi|409107272|pdb|4FSX|A Chain A, Crystal Structure Of Se-Substituted Zea Mays Zmet2 In
Complex With Sah
gi|409107273|pdb|4FSX|B Chain B, Crystal Structure Of Se-Substituted Zea Mays Zmet2 In
Complex With Sah
Length = 784
Score = 804 bits (2077), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/728 (55%), Positives = 504/728 (69%), Gaps = 36/728 (4%)
Query: 72 FVSPPVSADEALKRYPDRYKALN-----EEEEVLQARCHYTQASVDGCLYNLGDDAYVKA 126
F+ PV+ADEA +P RY +EEE L+ARCHY A VD +Y LGDD YVKA
Sbjct: 9 FIGSPVAADEARSNWPKRYGRSTAAKKPDEEEELKARCHYRSAKVDNVVYCLGDDVYVKA 68
Query: 127 EEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLV------DRKRVFLSDV 180
E DYI RI E FE D YF RWF+RAEDTVI L + D +RVFLS+
Sbjct: 69 GENEADYIGRITEFFEGTDQCHYFTCRWFFRAEDTVINSLVSISVDGHKHDPRRVFLSEE 128
Query: 181 EDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNINNESNRRD 240
++DN L+CI+SK KI V N D +AK + I CDLYYD Y++ + TF NI++E+ +
Sbjct: 129 KNDNVLDCIISKVKIVHVDPNXDPKAKAQLIESCDLYYDXSYSVAYSTFANISSENGQSG 188
Query: 241 SDASSTISS-----ETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAI 295
SD +S ISS ET S+ P +LLDLYSGCG STGLC+GA+LSG+KL TRWA+
Sbjct: 189 SDTASGISSDDVDLETSSSXPTRT--ATLLDLYSGCGGXSTGLCLGAALSGLKLETRWAV 246
Query: 296 DINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEE 355
D N AC+SLK+NHP+T+VRNE AD+FL+LLKEWA LC+ + + D D N S E
Sbjct: 247 DFNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCKKY-VQDVDS------NLASSE 299
Query: 356 EEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWE 415
++ D+D+ + +EF VE+L+ +CYG ++ G+YFKV+W+GYGP EDTWE
Sbjct: 300 DQA--------DEDSPLDKDEFVVEKLVGICYGGSDREN--GIYFKVQWEGYGPEEDTWE 349
Query: 416 PIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIK 475
PI LS C +K++EFV +G++ ILPLPGDVD ICGGPPCQG+SGFNR+RN L+D K
Sbjct: 350 PIDNLSDCPQKIREFVQEGHKRKILPLPGDVDVICGGPPCQGISGFNRYRNRDEPLKDEK 409
Query: 476 NRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSY 535
N+Q + F D++ YLKPKYVL ENVVDILKF+ G+L +YA+ LV+ YQ RLG AG Y
Sbjct: 410 NKQXVTFXDIVAYLKPKYVLXENVVDILKFADGYLGKYALSCLVAXKYQARLGXXVAGCY 469
Query: 536 GLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVL 595
GLPQFR RVFLWGA LP+YPLPT+++V RG PN F + VAY Q L+K +L
Sbjct: 470 GLPQFRXRVFLWGALSSXVLPKYPLPTYDVVVRGGAPNAFSQCXVAYDETQKPSLKKALL 529
Query: 596 LSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMAS-RPSLLYDH 654
L DAISDLP V N++ D +YG +TEFQ+YIRL R D ++ S + A L DH
Sbjct: 530 LGDAISDLPKVQNHQPNDVXEYGGSPKTEFQRYIRLSRKDXLDWSFGEGAGPDEGKLLDH 589
Query: 655 RPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYA 714
+P ++NNDDYERV IP +KGANFRDL GV VG +N V WDP +ERV L SGKPLVPDYA
Sbjct: 590 QPLRLNNDDYERVQQIPVKKGANFRDLKGVRVGANNIVEWDPEIERVKLSSGKPLVPDYA 649
Query: 715 MKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQ 774
F S KPFGRLWWDE V TVVTRA+PHN++++HP+Q RVLTIRENARLQGFPD Y+
Sbjct: 650 XSFIKGKSLKPFGRLWWDETVPTVVTRAEPHNQVIIHPTQARVLTIRENARLQGFPDYYR 709
Query: 775 LFGPVKER 782
LFGP+KE+
Sbjct: 710 LFGPIKEK 717
>gi|169977312|emb|CAQ18903.1| chromomethylase [Nicotiana sylvestris]
gi|169977314|emb|CAQ18904.1| chromomethylase [Nicotiana sylvestris]
gi|169977316|emb|CAQ18905.1| chromomethylase [Nicotiana sylvestris]
gi|169977318|emb|CAQ18906.1| chromomethylase [Nicotiana sylvestris]
Length = 741
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/694 (56%), Positives = 504/694 (72%), Gaps = 18/694 (2%)
Query: 94 NEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKAR 153
++ ++++QA+CH+ QA VDG +YNLGDDAYV+A DYI +IVE F++VDG YF A+
Sbjct: 7 DDADQLIQAKCHFAQAVVDGQIYNLGDDAYVQASNDEDDYICKIVEFFQAVDGMQYFTAQ 66
Query: 154 WFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPP 213
WFYRA+DTVIK ++ KRVF S+++DDNPL C+V K KI + +N+ L K+
Sbjct: 67 WFYRAKDTVIKAHDQFINNKRVFFSEIKDDNPLGCLVKKIKIVPIPSNVRLPLKESLRSN 126
Query: 214 CDLYYDMKYTLPHLTFLNINNE-SNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCG 272
D YYDM Y LP+ +F+++ + S+ S+ S + + E +LLDLYSGCG
Sbjct: 127 SDYYYDMMYLLPYSSFVSLPQDVSSPISESDSTISSDSDTVDVKEQKLEKNLLDLYSGCG 186
Query: 273 AMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKL 332
AMSTGLC+GA + GVKLVT+WA+D+N +AC SLK+NHPET VRNE+ADDFL LL+EW +L
Sbjct: 187 AMSTGLCLGADIGGVKLVTKWAVDLNQYACDSLKWNHPETAVRNESADDFLLLLREWRQL 246
Query: 333 CQYFSIYDTDKVPEQSLNF----MSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYG 388
C S+ + L + + +E+E DD+ E FEVE L+ +CYG
Sbjct: 247 CASCSLLRNNTPTHPFLKVRDEDEEDNNDNGDEDEGSGDDEQG---EIFEVEELLEICYG 303
Query: 389 DPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDF 448
DP + KPG+YFKVRWKGYG EDTWEPI+GL C+EK+K+FV KG++++ILPLPG+V+
Sbjct: 304 DPKEINKPGLYFKVRWKGYGQEEDTWEPIEGLDGCQEKIKDFVAKGFKASILPLPGEVEV 363
Query: 449 ICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGG 508
ICGGPPCQGVSGFNRFRN + L D KN+QL FMD++E+L P++VLMENVVD++KF+ G
Sbjct: 364 ICGGPPCQGVSGFNRFRNSKNPLGDSKNKQLETFMDIVEFLNPRFVLMENVVDLVKFADG 423
Query: 509 FLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVAR 568
FL RYA+GRLV M+YQTR+G+M AG+YGLPQFR RVF+WGA P +KLPQYPLPTH +V R
Sbjct: 424 FLGRYALGRLVGMNYQTRMGMMVAGAYGLPQFRRRVFMWGALPSEKLPQYPLPTHNVVVR 483
Query: 569 GVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKY 628
G +P EF+ +VAY +L++ + L DAISDLP V N+E +DE Y ++ FQ +
Sbjct: 484 GGMPKEFELNVVAYDEALKVELKRELFLKDAISDLPPVENDEPKDEMPYIDEPKSAFQHF 543
Query: 629 IRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGP 688
IR RR + S+LYDHRP ++N DDYERVC IPKRKGANFRDLPGV V
Sbjct: 544 IRSRRDGTLG----------SVLYDHRPLRLNEDDYERVCQIPKRKGANFRDLPGVRVRA 593
Query: 689 DNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI 748
+N V DP +ERV + SGKPLVPDYA+ F +STKPFGRLWWDEIV TVVTRA+PHN++
Sbjct: 594 NNTVELDPDVERVKVASGKPLVPDYAITFVRGTSTKPFGRLWWDEIVPTVVTRAEPHNQV 653
Query: 749 LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+LHP QDRVLTIRENARLQG PD Y+L GP+KER
Sbjct: 654 ILHPEQDRVLTIRENARLQGLPDYYKLTGPIKER 687
>gi|347952210|gb|AEP33250.1| CMT-type DNA-methyltransferase [Posidonia oceanica]
Length = 802
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/741 (53%), Positives = 516/741 (69%), Gaps = 35/741 (4%)
Query: 59 KKTQKNKPDSDLFFVSPPVSADEALKRYPDRY-----------KALNEEEEVLQARCHYT 107
KK K D D FV P+ EA +R+P RY E E L A+CHY
Sbjct: 7 KKGVKADEDHDCRFVGTPIPDGEARRRWPARYPKKPRQGNSITNGAAFEYEDLLAKCHYE 66
Query: 108 QASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLA 167
+A V+G +YNL DD YVKAE G DYI RIVE FE++DGE YF A+WF+R EDT+I +
Sbjct: 67 RAEVEGFVYNLHDDVYVKAETGKPDYIGRIVEFFEAIDGEYYFTAQWFFRVEDTIIGSVG 126
Query: 168 CLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKN-IPPCDLYYDMKYTLPH 226
DR RVFLSD ++DN L+CIVSK KI + + +QK IP CDLYY+M Y++P+
Sbjct: 127 DFHDRCRVFLSDEKNDNVLDCIVSKIKIVQ------RDPEQKGPIPSCDLYYNMSYSVPY 180
Query: 227 LTFLNINNESNRRDSDASSTISSE----TGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGA 282
+F N++ + +R S+ SST+S E T + + + + ++LDLYSGCGAMSTGLC GA
Sbjct: 181 SSFTNLSKDKSRAGSEESSTVSFEDAVDTSNEETLSEKKTTVLDLYSGCGAMSTGLCHGA 240
Query: 283 SLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTD 342
L+G+ + T WA+D+N AC+SL+ NH E KVRNE A+ FL+LLKEW KLC+ +S
Sbjct: 241 HLAGLNIETMWAVDMNKDACRSLQLNHSEAKVRNENAEHFLALLKEWEKLCEKYS----- 295
Query: 343 KVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKV 402
+ L+ EE +E+ E++DDA+ +EEF VE+L+ +CYGDP K K G+ FKV
Sbjct: 296 --GSKDLDL----EETMQEDNSEDNDDAD-SDEEFVVEKLLDICYGDPAKIGKDGIKFKV 348
Query: 403 RWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFN 462
RWKGYG EDTWEPI+ L KC+E++ FV G ++ +LPLPGDVD +CGGPPCQG+SGFN
Sbjct: 349 RWKGYGSDEDTWEPIENLGKCEERMGNFVRWGMKTYLLPLPGDVDAVCGGPPCQGISGFN 408
Query: 463 RFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMD 522
RFRN L+D KNRQ++ +MD++++LKPKYVLMENVVDILKFS GFL RYA+ LVS +
Sbjct: 409 RFRNSDNPLDDEKNRQMVTYMDIVDHLKPKYVLMENVVDILKFSKGFLGRYALSFLVSRN 468
Query: 523 YQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAY 582
YQ RLGIMAAG YGLPQFRLR F WG+ P+K LPQ+PLPTH++V + P EF+ +VAY
Sbjct: 469 YQARLGIMAAGCYGLPQFRLRAFFWGSDPYKMLPQFPLPTHDVVFKCGAPTEFERNVVAY 528
Query: 583 ANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVV-NLSS 641
NQP LEK +++ DA+SDLP VT E+ D+ YG +TEFQ+YIR + +++ +
Sbjct: 529 DENQPRVLEKALVIEDALSDLPSVTLLETRDQLSYGKAPQTEFQRYIRASKSEIMCSKDY 588
Query: 642 AQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERV 701
SR S+LYDH Q++ ++Y R+C IP+RKGA FRDLPGV+V PDN + DPS E
Sbjct: 589 DAKKSRTSVLYDHCSLQLSKENYSRICQIPRRKGACFRDLPGVIVLPDNSTQRDPSKEME 648
Query: 702 MLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIR 761
+L SGKPLVP++ +E+ S +PFGRLWWDE V TV+T A PH + +LHP QDRVLT+R
Sbjct: 649 LLPSGKPLVPNFCFTYENGKSLRPFGRLWWDETVPTVLTTAGPHFQAILHPEQDRVLTVR 708
Query: 762 ENARLQGFPDCYQLFGPVKER 782
ENARLQGFPD Y+ G +KER
Sbjct: 709 ENARLQGFPDFYRFSGTIKER 729
>gi|357140240|ref|XP_003571678.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3-like [Brachypodium
distachyon]
Length = 898
Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/761 (53%), Positives = 510/761 (67%), Gaps = 30/761 (3%)
Query: 35 QQQEEQREDEEVKEEPVELVTRVKKKTQ---KNKPDSDLFFVSPPVSADEALKRYPDRYK 91
++ E E+ EEP RV + + + D D FV P A EA ++P RY+
Sbjct: 89 EEDESAASGEQQPEEPAAARKRVAQPIRARNQAGGDKDHGFVGAPFPAGEARSKWPQRYQ 148
Query: 92 ALNEEEEVL-----QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDG 146
+ARCHY A VD +YNLGDD YV A E YI RI E FE +D
Sbjct: 149 PTKPRRPEEEEEDPKARCHYRSAKVDEAIYNLGDDVYVMAGENEPHYIGRITEFFEGIDK 208
Query: 147 EPYFKARWFYRAEDTVIKDLACLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEVATNM 202
+ YF RWF+R EDTVI + D KRVFLS+ ++DN L CIV K I V NM
Sbjct: 209 KCYFTCRWFFRPEDTVISTAKFVNDHTHDPKRVFLSEEKNDNVLECIVLKVNIVHVDPNM 268
Query: 203 DLEAKQKNIPPCDLYYDMKYTLPHLTFLNINNESNRRDSDASSTISSETGSNSPIGQPEM 262
D EAK + + DLYYDM Y++ + TF NI + N ++ +S ISS+ S +
Sbjct: 269 DSEAKAQLVAESDLYYDMSYSVAYSTFANITS-GNFCYTNDNSGISSDVDSEAASPVRTA 327
Query: 263 SLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDF 322
LLDLYSGCG MSTGLC+G++L+G+KL TRWA+D+N ACKSLK+NHP T+VRNE A+DF
Sbjct: 328 VLLDLYSGCGGMSTGLCLGSALAGLKLETRWAVDLNSFACKSLKYNHPGTEVRNEKAEDF 387
Query: 323 LSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERL 382
L+LLKEWA LC + ++ + P E+E +DD + +EF VE+L
Sbjct: 388 LALLKEWAILCDTY-VHGNNSDPASP-------------SEDEEEDDEPLGKDEFVVEKL 433
Query: 383 IAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPL 442
+ +CYG + K +YFKV+WKGYGP EDTWEPI LS C K+KEFV +G++ NILPL
Sbjct: 434 LEICYGGSGREK--AIYFKVQWKGYGPEEDTWEPIGNLSDCPLKIKEFVQEGHKRNILPL 491
Query: 443 PGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDI 502
PGDV+ ICGGPPCQG+SGFNRFRN + L+D KN+Q++ FMD++ YLKPK+VLMENVVDI
Sbjct: 492 PGDVEVICGGPPCQGISGFNRFRNRKEPLKDEKNQQMVTFMDIVSYLKPKFVLMENVVDI 551
Query: 503 LKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
LKF+ G+L RYA+ RLVS++YQ RLGIM AG YGLPQFR+RVFLWGA P LP+YPLPT
Sbjct: 552 LKFADGYLGRYALSRLVSLNYQARLGIMVAGCYGLPQFRMRVFLWGALPAMVLPKYPLPT 611
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVAR 622
H++V RG PN F + IVAY Q L+K +LL DAISDLP N + + +YG +
Sbjct: 612 HDVVVRGGAPNAFSQSIVAYDETQKPTLKKALLLGDAISDLPKANNFQPHEVMEYGAQPK 671
Query: 623 TEFQKYIRLRRHDVVNLSSA-QMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDL 681
TEFQ YIRL R D+++ S L DH+P ++N DDY+RV IP +KGANFRDL
Sbjct: 672 TEFQSYIRLSRKDMLDYSFGDNTCPEEGKLLDHQPLRLNQDDYDRVQQIPVKKGANFRDL 731
Query: 682 PGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR 741
PGV VG +N V WDP ++RV LKSGKPLVPDYAM F S KPFGRLWWDE V TVVTR
Sbjct: 732 PGVKVGANNIVEWDPEVQRVYLKSGKPLVPDYAMSFIKGRSLKPFGRLWWDETVPTVVTR 791
Query: 742 AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
A+PHN+I+LHP+Q RVLT+RENARLQGFPD Y++ GP+KE+
Sbjct: 792 AEPHNQIILHPNQARVLTVRENARLQGFPDYYRMNGPIKEK 832
>gi|357141720|ref|XP_003572323.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3-like [Brachypodium
distachyon]
Length = 897
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/722 (54%), Positives = 504/722 (69%), Gaps = 31/722 (4%)
Query: 72 FVSPPVSADEALKRYPDRYKALN----EEEEVLQARCHYTQASVDGCLYNLGDDAYVKAE 127
FV P ADEA ++ RY+ +EE L+ARCHY A+VDG +Y LGDD YVKA
Sbjct: 130 FVGEPFPADEARSKWSQRYQRAAPRRPDEEPELKARCHYRSANVDGTVYALGDDVYVKAA 189
Query: 128 EGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDR----KRVFLSDVEDD 183
E DYI RI E FE D YF RWF+R EDTVI + D KRVFLS+ +D
Sbjct: 190 ENEADYIGRITEFFEGTDRHCYFACRWFFRPEDTVISTAKFVDDHTHDPKRVFLSEETND 249
Query: 184 NPLNCIVSKAKIAEVATNMDLEAKQKNIP--PCDLYYDMKYTLPHLTFLNINNESNRRDS 241
N L+CI+ K KI V NMD E K + + +LYYDM Y + + TF NI +++N +S
Sbjct: 250 NVLDCIIKKVKIIHVDPNMDPEGKAQLVADSEAELYYDMSYAVAYSTFANIPSDTNE-NS 308
Query: 242 DASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHA 301
SS E G+ P+ +LLDLYSGCG MSTGLC+GA+L+G+KL TRWA+D+N A
Sbjct: 309 GISSDADLEAGT-PPVRT--AALLDLYSGCGGMSTGLCLGAALAGLKLETRWAVDLNSFA 365
Query: 302 CKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEEEEEEEE 361
CKSLK+NHP T+VRNE A++FL+LLKEWA LC + E +
Sbjct: 366 CKSLKYNHPGTEVRNEKAEEFLALLKEWAILCDTY--------------VHVNNSESDSP 411
Query: 362 EEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLS 421
E+E +DD + +EF VE+L+ +CYG + K G+YFKV+WKGYGP EDTWEPI LS
Sbjct: 412 IEDEEEDDEPLAKDEFVVEKLLEICYGGSGRGK--GIYFKVQWKGYGPEEDTWEPIGNLS 469
Query: 422 KCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV 481
C+ K+KEFV +G++ ILPLPGDVD ICGGPPCQG+SGFNRFRN + L+D KN+Q++
Sbjct: 470 DCQLKIKEFVQEGHKRKILPLPGDVDVICGGPPCQGISGFNRFRNRKEPLKDEKNQQMVT 529
Query: 482 FMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFR 541
FMD++ YLKPK+VLMENVVDILKF+ G+L RYA+ RLV+++YQ RLG+M AG YGLPQFR
Sbjct: 530 FMDIVSYLKPKFVLMENVVDILKFADGYLGRYALSRLVALNYQARLGMMVAGCYGLPQFR 589
Query: 542 LRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAIS 601
+RVFLWGA P LP+YPLPT+++V RG++PN F + +VAY Q L+K +LL DAIS
Sbjct: 590 MRVFLWGALPDMVLPKYPLPTYDVVVRGIVPNAFSQSVVAYDETQKPTLKKALLLGDAIS 649
Query: 602 DLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSA-QMASRPSLLYDHRPFQVN 660
DLP N + + +YGT +TEFQ+YIRL R D+++ S L DH+P ++N
Sbjct: 650 DLPEANNYQLHEVMEYGTKPKTEFQRYIRLGRKDMLDHSFGDNTCPEEGKLLDHQPLRLN 709
Query: 661 NDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQ 720
DDY+RV IP +KGANFRDLPG+ VG +N V WDP + RV LKSGKPLVPDYAM F
Sbjct: 710 QDDYDRVQQIPVKKGANFRDLPGIKVGANNIVEWDPEVPRVYLKSGKPLVPDYAMSFIKG 769
Query: 721 SSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVK 780
S KPFGRLWWDE V+TVVTRA+PHN+I+LHP+Q RVL++RENARLQGFPD Y++ GP+K
Sbjct: 770 RSLKPFGRLWWDETVSTVVTRAEPHNQIILHPNQARVLSVRENARLQGFPDYYRMNGPIK 829
Query: 781 ER 782
E+
Sbjct: 830 EK 831
>gi|27529842|dbj|BAC53936.1| chromomethylase-like protein [Nicotiana tabacum]
Length = 741
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/695 (55%), Positives = 501/695 (72%), Gaps = 20/695 (2%)
Query: 94 NEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKAR 153
++ ++++QA+CH+TQA VDG +YNLGDDAYV+A DYI +IVE F++VDG YF A+
Sbjct: 7 DDGDQLIQAKCHFTQAVVDGQIYNLGDDAYVQASSDEDDYICKIVEFFQAVDGMQYFTAQ 66
Query: 154 WFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPP 213
WFYRA+DTVIK +D KRVF S+++DDNPL C+V K KI + +N+ K+
Sbjct: 67 WFYRAKDTVIKAHDQFIDNKRVFFSEIKDDNPLGCLVKKIKIVAIPSNVRPPLKESLRSN 126
Query: 214 CDLYYDMKYTLPHLTFLNINNE-SNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCG 272
D YYDM Y LP+ +F+++ + S+ S+ S + + E +LLDLYSGCG
Sbjct: 127 SDYYYDMMYLLPYSSFVSLPQDVSSPISESDSTISSDSDTVDVKEQKLEKNLLDLYSGCG 186
Query: 273 AMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKL 332
AMSTGLC+GA + GVKLVT+WA+D+N +AC SLK+NHPET VRNE+ADDFL LL+EW +L
Sbjct: 187 AMSTGLCLGADIGGVKLVTKWAVDLNQYACDSLKWNHPETAVRNESADDFLLLLREWRQL 246
Query: 333 CQYFSIYDTDKVPEQSL-----NFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCY 387
C S+ + P S ++ + E+E+E DD+ E FEVE+L+ +CY
Sbjct: 247 CASCSLL-RNNTPTHSFLKVRDEDDKDDNDNEDEDEGSGDDEQG---EIFEVEQLLEICY 302
Query: 388 GDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVD 447
GDP + KPG+YFKVRWKGYG EDTWEPI+GL C+EK+K+FV KG++++ILPLPG+V
Sbjct: 303 GDPKEKNKPGLYFKVRWKGYGQEEDTWEPIEGLDGCQEKIKDFVAKGFKASILPLPGEVQ 362
Query: 448 FICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSG 507
ICGGPPCQGVSGFNRFRN L D KN+QL FMD++E+L P++VLMENVVD++KF+
Sbjct: 363 VICGGPPCQGVSGFNRFRNSTNPLGDSKNKQLETFMDIVEFLNPRFVLMENVVDLVKFAD 422
Query: 508 GFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVA 567
GFL RYA+GRLV M+YQ R+G+M AG+YGLPQFR R +WGA P + LPQYPLPTH +V
Sbjct: 423 GFLGRYALGRLVGMNYQARMGMMVAGAYGLPQFRRRASMWGALPSETLPQYPLPTHNVVV 482
Query: 568 RGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQK 627
RG +P F+ +VAY +L++ + L DAIS LP V ++E DE Y ++ FQ
Sbjct: 483 RGEMPKAFEFNVVAYDEALTVELKRELFLKDAISALPPVEHDEPTDEMPYIDEPKSAFQH 542
Query: 628 YIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVG 687
+IR RR+ + S+LYDHRP ++N DDY+RVC IPKRKGANFRDLPGV V
Sbjct: 543 FIRSRRNGTLG----------SVLYDHRPLRLNEDDYQRVCQIPKRKGANFRDLPGVRVR 592
Query: 688 PDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR 747
+N V DP +ERV + SGKPLVPDYA+ F +STKPFGRLWWDEIV TVVTRA+PHN+
Sbjct: 593 ANNTVELDPDVERVKVASGKPLVPDYAITFVRGTSTKPFGRLWWDEIVPTVVTRAEPHNQ 652
Query: 748 ILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
++LHP QDRVLTIRENARLQGFPD Y+L GP+KER
Sbjct: 653 VILHPEQDRVLTIRENARLQGFPDYYKLTGPIKER 687
>gi|14647157|gb|AAK71870.1| chromomethylase 3 [Arabidopsis thaliana]
Length = 839
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/774 (52%), Positives = 522/774 (67%), Gaps = 56/774 (7%)
Query: 46 VKEEPVELVTRVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKAL------------ 93
VKEEPV +V +K + F+ P+ EA +PDRYK +
Sbjct: 32 VKEEPVTVVEEGEKHVAR--------FLDEPIPESEAKSTWPDRYKPIEVQPPKASSRKK 83
Query: 94 ---NEEEEVLQARCHYTQASVDG-CLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPY 149
+E+ E+++ARCHY +A VD +Y L DDAYV++ EG +I +I+E+FE V+G+ Y
Sbjct: 84 TKDDEKVEIIRARCHYRRAIVDERQIYELNDDAYVQSGEGKDPFICKIIEMFEGVNGKLY 143
Query: 150 FKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQK 209
F ARWFYR DTV+K+ L+++KRVF S+++D N L + K I + N E ++
Sbjct: 144 FTARWFYRPSDTVMKEFEILINKKRVFFSEIQDTNELGLLEKKLNILMIPLN---ENTKE 200
Query: 210 NIPP---CDLYYDMKYTLPHLTFLNINNESNRRDSDASSTISSETG-------------- 252
IP CD + DM Y LP+ TF I E+ S+ SSTISS+T
Sbjct: 201 TIPATENCDFFCDMNYFLPYDTFEAIQQETMMAISE-SSTISSDTDIREGAAAISEIGEC 259
Query: 253 SNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPET 312
S GQ E +LLDLYSGCGAMSTGLC+GA LSG+ LVT+WA+D+N HACKSL+ NHPET
Sbjct: 260 SQETEGQKEATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHPET 319
Query: 313 KVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPE----QSLNFMSEEEEEEEEEEEENDD 368
VRN A+DFL LLKEW KLC +FS+ ++ E LN + E+ E+ EE EN+D
Sbjct: 320 NVRNMTAEDFLFLLKEWEKLCIHFSLRNSPNSEEYANLHGLN--NVEDNEDVSEESENED 377
Query: 369 DANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLK 428
D V F V++++ + +G P K K G+Y KVRW Y S DTWEPI+GLS C+ K+
Sbjct: 378 DGEV----FTVDKIVGISFGVPKKLLKRGLYLKVRWLNYDDSHDTWEPIEGLSNCRGKIG 433
Query: 429 EFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEY 488
EFV GY+S ILPLPG VD +CGGPPCQG+SG NRFRN LED KN+QLLV+M+++EY
Sbjct: 434 EFVKLGYKSGILPLPGGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIVEY 493
Query: 489 LKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWG 548
LKPK+VLMENVVD+LK + G+LAR+AVGRL+ M+YQ R G+MAAG+YGL QFRLR FLWG
Sbjct: 494 LKPKFVLMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAYGLAQFRLRFFLWG 553
Query: 549 ARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTN 608
A P + +PQ+PLPTH++V RG I EFQ IVAY +L +LL D ISDLP V N
Sbjct: 554 ALPSEIIPQFPLPTHDLVHRGNIVKEFQGNIVAYDEGHTVKLADKLLLKDVISDLPAVAN 613
Query: 609 NESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVC 668
+E DE Y T FQK+IRLR+ D + S ++ S+ +LYDH P +N +DYERVC
Sbjct: 614 SEKRDEITYDKDPTTPFQKFIRLRK-DEASGSQSKSKSKKHVLYDHHPLNLNINDYERVC 672
Query: 669 CIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGR 728
+PKRKGANFRD PGV+VGP N V+ + ERV L+SGK LVPDYA+ + S KPFGR
Sbjct: 673 QVPKRKGANFRDFPGVIVGPGNVVKLEEGKERVKLESGKTLVPDYALTYVDGKSCKPFGR 732
Query: 729 LWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
LWWDEIV TVVTRA+PHN++++HP Q+RVL+IRENARLQGFPD Y+LFGP K++
Sbjct: 733 LWWDEIVPTVVTRAEPHNQVIIHPEQNRVLSIRENARLQGFPDDYKLFGPPKQK 786
>gi|297841705|ref|XP_002888734.1| chromomethylase CMT3 [Arabidopsis lyrata subsp. lyrata]
gi|297334575|gb|EFH64993.1| chromomethylase CMT3 [Arabidopsis lyrata subsp. lyrata]
Length = 838
Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/768 (52%), Positives = 519/768 (67%), Gaps = 45/768 (5%)
Query: 46 VKEEPVELVTRVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKAL------------ 93
VKEEPV+ V +K + F+ P+ EA +PDRYK +
Sbjct: 32 VKEEPVKFVEEGEKYVAR--------FLDEPIPESEAKSTWPDRYKPITVQKPKAPSRNT 83
Query: 94 ---NEEEEVLQARCHYTQASVDG-CLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPY 149
+E++++++ARCHY +A VD +Y L DDAYV+A EG ++ +IVE+FE +G+ Y
Sbjct: 84 TKDDEKDKIIRARCHYRRAIVDERQIYELNDDAYVQAGEGNQPFVCKIVEMFEGANGKLY 143
Query: 150 FKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQK 209
F ARWFYRA+DTV+K L+D KRVF S++ D N L + K I + N +
Sbjct: 144 FTARWFYRADDTVMKQFKILIDDKRVFFSEIRDTNELGLLEKKLNILMIPLNENAAGPIA 203
Query: 210 NIPPCDLYYDMKYTLPHLTFLNINNESNRRDSDASSTISSET--------------GSNS 255
CD Y DM Y LP+ TF + ++ S+ SSTISS+T GS
Sbjct: 204 ATKTCDYYCDMNYLLPYDTFEALQQDTKMAISE-SSTISSDTDVNEGAAAISENQEGSQD 262
Query: 256 PIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVR 315
Q E +LLDLYSGCGAMSTGLC+GA LSG+ LVT+WA+D+N HACKSL NHPET VR
Sbjct: 263 TRVQRETTLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLGHNHPETHVR 322
Query: 316 NEAADDFLSLLKEWAKLCQYFSIYDTDKVPE-QSLNFMSEEEEEEEEEEEENDDDANVPN 374
N +A+DFL LLKEW KLC +FS+ ++ E ++L+ M+ E+ E+ EE +
Sbjct: 323 NMSAEDFLFLLKEWEKLCIHFSLRNSPNSEEYENLHGMTNVEDNEDVSEESD---DEDDG 379
Query: 375 EEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKG 434
E F VE+++ + +G P K +K G+Y KVRW Y S DTWEPI+GLS C+EK+KEFV G
Sbjct: 380 EVFTVEKIVGISFGVPKKLQKRGLYLKVRWLNYDDSHDTWEPIEGLSNCREKIKEFVKLG 439
Query: 435 YRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYV 494
Y S ILPLPG VD +CGGPPCQG+SG NRFRN L+D KN+QLLV+M+++E+LKPKYV
Sbjct: 440 YESGILPLPGGVDVVCGGPPCQGISGHNRFRNLLEPLKDEKNKQLLVYMNIVEFLKPKYV 499
Query: 495 LMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKK 554
LMENVVD+LK S G+LARYAVGRL+ M+YQ R+G+MAAG+YGL QFRLR FLWGA P
Sbjct: 500 LMENVVDMLKMSEGYLARYAVGRLIQMNYQVRMGMMAAGAYGLAQFRLRFFLWGALPSMM 559
Query: 555 LPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
+PQ+PLPTH++V RG I EFQ VAY +L +LL D ISDLP V N+E DE
Sbjct: 560 IPQFPLPTHDLVQRGNIVKEFQGNTVAYDEGHTVKLADKLLLRDVISDLPAVDNSEQRDE 619
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
Y T FQ++IRLR+ + + S + S+ +LYDH P +N +DY+RVC +PKRK
Sbjct: 620 IPYDQDPVTPFQQFIRLRKDEALG-SLTKSKSKKHVLYDHHPLNLNINDYQRVCRVPKRK 678
Query: 675 GANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEI 734
GANFRD PGV+VGP N V D M ++ML+SGK LVP+YA+ F +S+KPFGRLWWDEI
Sbjct: 679 GANFRDFPGVIVGPGNVVHLDEDM-KIMLQSGKQLVPNYALTFVDGTSSKPFGRLWWDEI 737
Query: 735 VNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
V TVVTRA+PHN++++HP+QDRVL+IRENARLQGFPD Y+LFGP K++
Sbjct: 738 VPTVVTRAEPHNQVIIHPTQDRVLSIRENARLQGFPDDYKLFGPTKQK 785
>gi|297737359|emb|CBI26560.3| unnamed protein product [Vitis vinifera]
Length = 847
Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/740 (51%), Positives = 518/740 (70%), Gaps = 33/740 (4%)
Query: 63 KNKPDSDLFFVSPPVSADEALKRYPDRY--KALNEEEE--VLQARCHYTQASVDGCLYNL 118
K K + F V PV +EA +R+P RY K ++EE+ VL +CHY+QA ++ C++NL
Sbjct: 65 KGKGKAVSFLVGDPVPDEEARQRWPWRYEEKVRDDEEDELVLDVKCHYSQAEIEKCIFNL 124
Query: 119 GDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLS 178
GD AYVKA +G +YI RI+E F+++D E YF+ +WF+R EDTV+++ ++KR+F S
Sbjct: 125 GDCAYVKASKGGRNYIGRILEFFKTMDDEDYFRVQWFFRPEDTVMEEEGAFHEKKRLFYS 184
Query: 179 DVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTF--LNINNES 236
++ +DN L+CIVSK I ++ +++L K K+I PCD YYDMKY + + TF + ++N +
Sbjct: 185 NLVNDNLLDCIVSKVNIIQITPSVNL--KSKSILPCDFYYDMKYLIDYSTFCTMEVDNSA 242
Query: 237 NRRDSDASSTISS-----------ETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLS 285
+R + S+ + + S+ P +PE++LLD+YSGCG MSTGLC+GA LS
Sbjct: 243 DRTNLSTSACLKTVHMNGIKPEFNRMSSHKPY-KPELALLDIYSGCGGMSTGLCLGAKLS 301
Query: 286 GVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVP 345
GV LVTRWA+DIN AC+SLK NHPET++RNE+A+DFL LLKEW KLC+ + + D
Sbjct: 302 GVDLVTRWALDINKSACESLKLNHPETQIRNESAEDFLDLLKEWDKLCKRYVVKDV---- 357
Query: 346 EQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWK 405
++SL S + + + P+ EFEV LI +CYGDP + K G+ F+ RW
Sbjct: 358 QESLKVNSRVLRAAKVNSKTGNKS---PSGEFEVASLIDICYGDPTNSGKHGLKFQARWA 414
Query: 406 GYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFR 465
G+GPSEDTWEPI+GLSKC++ +++FV KG+++ ILP PGD D ICGGPPCQG+SG+NR R
Sbjct: 415 GHGPSEDTWEPIEGLSKCQDLIQDFVLKGFKAKILPRPGDADVICGGPPCQGISGYNRHR 474
Query: 466 NPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQT 525
N + +D +NRQ++VFMD++ +LKPKYVLMENVVDIL+F+ G + RYA+ RLV M+YQ
Sbjct: 475 NADSPFDDERNRQIIVFMDIVNFLKPKYVLMENVVDILQFAKGSVGRYALSRLVRMNYQA 534
Query: 526 RLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANN 585
RLGIMAAG YGLPQ+RLRVF WGA P ++LPQ+ LPTH+++ + P F+ IVAY
Sbjct: 535 RLGIMAAGCYGLPQYRLRVFFWGAHPDERLPQFALPTHDVILKYGAPTAFERNIVAYDEG 594
Query: 586 QPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMA 645
Q LEK ++L DAI+DLP V+NNE+ ++ Y TEFQKYIR + ++ + SA
Sbjct: 595 QSPDLEKALVLGDAIADLPPVSNNETREQMSYRRPPETEFQKYIRATKWEM--MGSACKG 652
Query: 646 SR---PSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVM 702
+R S+LYDH P +N DDY RVC IPK+KGANFRDLPGV+VG +N R DP E +
Sbjct: 653 TRKAEKSVLYDHLPLPLNEDDYLRVCRIPKKKGANFRDLPGVVVGANNVARRDPKTE-ME 711
Query: 703 LKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRE 762
L SGK +VPDYA+ F STKPF RLWWDE V TV+T+ PH + LHP QDRVLT+RE
Sbjct: 712 LPSGKQMVPDYALNFSEGKSTKPFARLWWDETVPTVLTKPDPHCQAYLHPEQDRVLTVRE 771
Query: 763 NARLQGFPDCYQLFGPVKER 782
+ARLQGFPD Y+ G VKER
Sbjct: 772 SARLQGFPDYYKFCGQVKER 791
>gi|15222449|ref|NP_177135.1| DNA (cytosine-5)-methyltransferase CMT3 [Arabidopsis thaliana]
gi|110832800|sp|Q94F88.2|CMT3_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase CMT3; AltName:
Full=Chromomethylase 3; AltName: Full=Protein
CHROMOMETHYLASE 3
gi|12325192|gb|AAG52543.1|AC013289_10 putative chromomethylase; 17383-22406 [Arabidopsis thaliana]
gi|332196852|gb|AEE34973.1| DNA (cytosine-5)-methyltransferase CMT3 [Arabidopsis thaliana]
Length = 839
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/774 (52%), Positives = 520/774 (67%), Gaps = 56/774 (7%)
Query: 46 VKEEPVELVTRVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKAL------------ 93
VKEEPV +V +K + F+ P+ EA +PDRYK +
Sbjct: 32 VKEEPVTVVEEGEKHVAR--------FLDEPIPESEAKSTWPDRYKPIEVQPPKASSRKK 83
Query: 94 ---NEEEEVLQARCHYTQASVDG-CLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPY 149
+E+ E+++ARCHY +A VD +Y L DDAYV++ EG +I +I+E+FE +G+ Y
Sbjct: 84 TKDDEKVEIIRARCHYRRAIVDERQIYELNDDAYVQSGEGKDPFICKIIEMFEGANGKLY 143
Query: 150 FKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQK 209
F ARWFYR DTV+K+ L+ +KRVF S+++D N L + K I + N E ++
Sbjct: 144 FTARWFYRPSDTVMKEFEILIKKKRVFFSEIQDTNELGLLEKKLNILMIPLN---ENTKE 200
Query: 210 NIPP---CDLYYDMKYTLPHLTFLNINNESNRRDSDASSTISSETG-------------- 252
IP CD + DM Y LP+ TF I E+ S+ SSTISS+T
Sbjct: 201 TIPATENCDFFCDMNYFLPYDTFEAIQQETMMAISE-SSTISSDTDIREGAAAISEIGEC 259
Query: 253 SNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPET 312
S G + +LLDLYSGCGAMSTGLC+GA LSG+ LVT+WA+D+N HACKSL+ NHPET
Sbjct: 260 SQETEGHKKATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHPET 319
Query: 313 KVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPE----QSLNFMSEEEEEEEEEEEENDD 368
VRN A+DFL LLKEW KLC +FS+ ++ E LN + E+ E+ EE EN+D
Sbjct: 320 NVRNMTAEDFLFLLKEWEKLCIHFSLRNSPNSEEYANLHGLN--NVEDNEDVSEESENED 377
Query: 369 DANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLK 428
D V F V++++ + +G P K K G+Y KVRW Y S DTWEPI+GLS C+ K++
Sbjct: 378 DGEV----FTVDKIVGISFGVPKKLLKRGLYLKVRWLNYDDSHDTWEPIEGLSNCRGKIE 433
Query: 429 EFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEY 488
EFV GY+S ILPLPG VD +CGGPPCQG+SG NRFRN LED KN+QLLV+M+++EY
Sbjct: 434 EFVKLGYKSGILPLPGGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIVEY 493
Query: 489 LKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWG 548
LKPK+VLMENVVD+LK + G+LAR+AVGRL+ M+YQ R G+MAAG+YGL QFRLR FLWG
Sbjct: 494 LKPKFVLMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAYGLAQFRLRFFLWG 553
Query: 549 ARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTN 608
A P + +PQ+PLPTH++V RG I EFQ IVAY +L +LL D ISDLP V N
Sbjct: 554 ALPSEIIPQFPLPTHDLVHRGNIVKEFQGNIVAYDEGHTVKLADKLLLKDVISDLPAVAN 613
Query: 609 NESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVC 668
+E DE Y T FQK+IRLR+ D + S ++ S+ +LYDH P +N +DYERVC
Sbjct: 614 SEKRDEITYDKDPTTPFQKFIRLRK-DEASGSQSKSKSKKHVLYDHHPLNLNINDYERVC 672
Query: 669 CIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGR 728
+PKRKGANFRD PGV+VGP N V+ + ERV L+SGK LVPDYA+ + S KPFGR
Sbjct: 673 QVPKRKGANFRDFPGVIVGPGNVVKLEEGKERVKLESGKTLVPDYALTYVDGKSCKPFGR 732
Query: 729 LWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
LWWDEIV TVVTRA+PHN++++HP Q+RVL+IRENARLQGFPD Y+LFGP K++
Sbjct: 733 LWWDEIVPTVVTRAEPHNQVIIHPEQNRVLSIRENARLQGFPDDYKLFGPPKQK 786
>gi|14583092|gb|AAK69756.1|AF383170_1 chromomethylase CMT3 [Arabidopsis thaliana]
Length = 839
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/774 (52%), Positives = 519/774 (67%), Gaps = 56/774 (7%)
Query: 46 VKEEPVELVTRVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKAL------------ 93
VKEEPV +V +K + F+ P+ EA +PDRYK +
Sbjct: 32 VKEEPVTVVEEGEKHVAR--------FLDEPIPESEAKSTWPDRYKPIEVQPPKASSRKK 83
Query: 94 ---NEEEEVLQARCHYTQASVDG-CLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPY 149
+E+ E+++ARCHY +A VD +Y L DDAYV++ EG +I +I+E+FE +G+ Y
Sbjct: 84 TKDDEKVEIIRARCHYRRAIVDERQIYELNDDAYVQSGEGKDPFICKIIEMFEGANGKLY 143
Query: 150 FKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQK 209
F ARWFYR DTV+K+ L+ KRVF S+++D N L + K I + N E ++
Sbjct: 144 FTARWFYRPSDTVMKEFEILIKEKRVFFSEIQDTNELGLLEKKLNILMIPLN---ENTKE 200
Query: 210 NIPP---CDLYYDMKYTLPHLTFLNINNESNRRDSDASSTISSETG-------------- 252
IP CD + DM Y LP+ TF I E+ S+ SSTISS+T
Sbjct: 201 TIPATENCDFFCDMNYFLPYDTFEAIQQETMMAISE-SSTISSDTDIREGAAAISEIGEC 259
Query: 253 SNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPET 312
S G + +LLDLYSGCGAMSTGLC+GA LSG+ LVT+WA+D+N HACKSL+ NHPET
Sbjct: 260 SQETEGHKKATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHPET 319
Query: 313 KVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPE----QSLNFMSEEEEEEEEEEEENDD 368
VRN A+DFL LLKEW KLC +FS+ ++ E LN + E+ E+ EE EN+D
Sbjct: 320 NVRNMTAEDFLFLLKEWEKLCIHFSLRNSPNSEEYANLHGLN--NVEDNEDVSEESENED 377
Query: 369 DANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLK 428
D V F V++++ + +G P K K G+Y KVRW Y S DTWEPI+GLS C+ K++
Sbjct: 378 DGEV----FTVDKIVGISFGVPKKLLKRGLYLKVRWLNYDDSHDTWEPIEGLSNCRGKIE 433
Query: 429 EFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEY 488
EFV GY+S ILPLPG VD +CGGPPCQG+SG NRFRN LED KN+QLLV+M+++EY
Sbjct: 434 EFVKLGYKSGILPLPGGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIVEY 493
Query: 489 LKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWG 548
LKPK+VLMENVVD+LK + G+LAR+AVGRL+ M+YQ R G+MAAG+YGL QFRLR FLWG
Sbjct: 494 LKPKFVLMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAYGLAQFRLRFFLWG 553
Query: 549 ARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTN 608
A P + +PQ+PLPTH++V RG I EFQ IVAY +L +LL D ISDLP V N
Sbjct: 554 ALPSEIIPQFPLPTHDLVHRGNIVKEFQGNIVAYDEGHTVKLADKLLLKDVISDLPAVAN 613
Query: 609 NESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVC 668
+E DE Y T FQK+IRLR+ D + S ++ S+ +LYDH P +N +DYERVC
Sbjct: 614 SEKRDEITYDKDPTTPFQKFIRLRK-DEASGSQSKSKSKKHVLYDHHPLNLNINDYERVC 672
Query: 669 CIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGR 728
+PKRKGANFRD PGV+VGP N V+ + ERV L+SGK LVPDYA+ + S KPFGR
Sbjct: 673 QVPKRKGANFRDFPGVIVGPGNVVKLEEGKERVKLESGKTLVPDYALTYVDGKSCKPFGR 732
Query: 729 LWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
LWWDEIV TVVTRA+PHN++++HP Q+RVL+IRENARLQGFPD Y+LFGP K++
Sbjct: 733 LWWDEIVPTVVTRAEPHNQVIIHPEQNRVLSIRENARLQGFPDDYKLFGPPKQK 786
>gi|110739012|dbj|BAF01425.1| putative chromomethylase [Arabidopsis thaliana]
Length = 839
Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/774 (51%), Positives = 520/774 (67%), Gaps = 56/774 (7%)
Query: 46 VKEEPVELVTRVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKAL------------ 93
VKEEPV +V +K + F+ P+ EA +PDRYK +
Sbjct: 32 VKEEPVTVVEEGEKHVAR--------FLDEPIPESEAKSTWPDRYKPIEVQPPKASSRKK 83
Query: 94 ---NEEEEVLQARCHYTQASV-DGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPY 149
+E+ E+++ARCHY +A V + +Y L DDAYV++ EG +I +I+E+FE +G+ Y
Sbjct: 84 TKDDEKVEIIRARCHYRRAIVGERQIYELNDDAYVQSGEGKDPFICKIIEMFEGANGKLY 143
Query: 150 FKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQK 209
F ARWFYR DTV+K+ L+ +KRVF S+++D N L + K I + N E ++
Sbjct: 144 FTARWFYRPSDTVMKEFEILIKKKRVFFSEIQDTNELGLLEKKLNILMIPLN---ENTKE 200
Query: 210 NIPP---CDLYYDMKYTLPHLTFLNINNESNRRDSDASSTISSETG-------------- 252
IP CD + DM Y LP+ TF I E+ S+ SSTISS+T
Sbjct: 201 TIPATENCDFFCDMNYFLPYDTFEAIQQETMMAISE-SSTISSDTDIREGAAAISEIGEC 259
Query: 253 SNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPET 312
S G + +LLDLYSGCGAMSTGLC+GA LSG+ LVT+WA+D+N HACKSL+ NHPET
Sbjct: 260 SQETEGHKKATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHPET 319
Query: 313 KVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPE----QSLNFMSEEEEEEEEEEEENDD 368
VRN A+DFL LLKEW KLC +FS+ ++ E LN + E+ E+ EE EN+D
Sbjct: 320 NVRNMTAEDFLFLLKEWEKLCIHFSLRNSPNSEEYANLHGLN--NVEDNEDVSEESENED 377
Query: 369 DANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLK 428
D V F V++++ + +G P K K G+Y KVRW Y S DTWEPI+GLS C+ K++
Sbjct: 378 DGEV----FTVDKIVGISFGVPKKLLKRGLYLKVRWLNYDDSHDTWEPIEGLSNCRGKIE 433
Query: 429 EFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEY 488
EFV GY+S ILPLPG VD +CGGPPCQG+SG NRFRN LED KN+QLLV+M+++EY
Sbjct: 434 EFVKLGYKSGILPLPGGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIVEY 493
Query: 489 LKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWG 548
LKPK+VLMENVVD+LK + G+LAR+AVGRL+ M+YQ R G+MAAG+YGL QFRLR FLWG
Sbjct: 494 LKPKFVLMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAYGLAQFRLRFFLWG 553
Query: 549 ARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTN 608
A P + +PQ+PLPTH++V RG I EFQ IVAY +L +LL D ISDLP V N
Sbjct: 554 ALPSEIIPQFPLPTHDLVHRGNIVKEFQGNIVAYDEGHTVKLADKLLLKDVISDLPAVAN 613
Query: 609 NESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVC 668
+E DE Y T FQK+IRLR+ D + S ++ S+ +LYDH P +N +DYERVC
Sbjct: 614 SEKRDEITYDKDPTTPFQKFIRLRK-DEASGSQSKSKSKKHVLYDHHPLNLNINDYERVC 672
Query: 669 CIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGR 728
+PKRKGANFRD PGV+VGP N V+ + ERV L+SGK LVPDYA+ + S KPFGR
Sbjct: 673 QVPKRKGANFRDFPGVIVGPGNVVKLEEGKERVKLESGKTLVPDYALTYVDGKSCKPFGR 732
Query: 729 LWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
LWWDEIV TVVTRA+PHN++++HP Q+RVL+IRENARLQGFPD Y+LFGP K++
Sbjct: 733 LWWDEIVPTVVTRAEPHNQVIIHPEQNRVLSIRENARLQGFPDDYKLFGPPKQK 786
>gi|2766715|gb|AAB95486.1| chromomethylase [Arabidopsis arenosa]
gi|2865435|gb|AAC02671.1| chromomethylase [Arabidopsis arenosa]
Length = 744
Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/734 (52%), Positives = 524/734 (71%), Gaps = 21/734 (2%)
Query: 62 QKNKPDSDLFFVSPPVSADEALKRYPDRYKAL----------NEEEEVLQARCHYTQASV 111
Q+ +P+ DL PVS E++ R+P RY + +++E++ A+ HY QA V
Sbjct: 1 QRAEPEGDLCRAGKPVSVVESMIRWPHRYPSKKTKLEAATKGDKKEKIKLAKRHYEQALV 60
Query: 112 DGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVD 171
DG L NL DD YV G +++I +++E+FE+ DG PY + RWFYR +DT+I+ A LV
Sbjct: 61 DGVLINLNDDVYVTHATGKLNFIGKVIEMFEADDGVPYCRIRWFYRPDDTLIERFAELVQ 120
Query: 172 RKRVFLSDVEDDNPLNCIVSKAKIAEVAT-NMDLEAKQKNIPPCDLYYDMKYTLPHLTFL 230
+KRVFLS+VEDDNPL CI SK IA+V + +Q+ IPPCD YYDMKY +P +L
Sbjct: 121 KKRVFLSNVEDDNPLTCIYSKVNIAKVPLPKITSRIEQRVIPPCDYYYDMKYEVP---YL 177
Query: 231 NINNESNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLV 290
N+ + + + ++ + S + + + E LLDLYSGCGAMSTG C+GAS++GVKL+
Sbjct: 178 NLTSADDDSAASSTLSSDSASNCFETLHKDEKFLLDLYSGCGAMSTGFCMGASIAGVKLI 237
Query: 291 TRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLN 350
T+W++DIN AC S + NHPET+VRNEAA+DFL LLKEW +LC+ FS+ + + P +S++
Sbjct: 238 TKWSVDINKFACDSFRHNHPETEVRNEAAEDFLILLKEWKRLCERFSLISSTE-PMESIS 296
Query: 351 FMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPS 410
+ +EE +E ++ +E D + EFEVE+ + + +GDP T + ++ KVRWKGY P
Sbjct: 297 ELEDEESDENDDIDEASTDMELSAGEFEVEKFVGIVFGDPKGTGEKTLHLKVRWKGYSPK 356
Query: 411 EDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAA 470
DTWEP GL CKEKLKE+VT G++S++LPLPG V +CGGPPCQG+SG+NRFRN QA
Sbjct: 357 YDTWEPYSGLGNCKEKLKEYVTDGFKSHLLPLPGTVYSVCGGPPCQGISGYNRFRNKQAP 416
Query: 471 LEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIM 530
LED KN+QLLVF+D+I++LKP YVLMENVVD+L+FS G+LAR+AV V+M+YQTRLG+M
Sbjct: 417 LEDKKNQQLLVFLDIIDFLKPSYVLMENVVDLLRFSKGYLARHAVASFVAMNYQTRLGMM 476
Query: 531 AAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQL 590
AGSYGLPQ R RVFLW A+P +KLP YPLPTHE+ + P EF+++ V + QL
Sbjct: 477 TAGSYGLPQVRNRVFLWAAQPTEKLPPYPLPTHEVEKKYNTPKEFEDLQVGLIQKELLQL 536
Query: 591 EKGVLLSDAISDLPLVTNNESEDERKYGTVA-RTEFQKYIRLRRHD-VVNLSSAQMASRP 648
+ + L+DAISDLP VTN+E+ D R Y A +T+F+ +I L+R + ++ + A R
Sbjct: 537 DNALTLADAISDLPPVTNSEANDVRNYNDAAPKTDFENFISLKRSETLLPVCGGDPARR- 595
Query: 649 SLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKP 708
L+DH P ++ +DD ER+ IPK+KGANFRD+PGVLV +NK + + ++R LKSGK
Sbjct: 596 --LFDHHPLELRDDDLERISYIPKKKGANFRDMPGVLVH-NNKAQLNLRVKRAKLKSGKN 652
Query: 709 LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQG 768
+VPDYA+ F S KPFGRLWWDEIVNTVVTRA+PHN+ ++HP Q+RVL++RENARLQG
Sbjct: 653 VVPDYAVSFIKGKSKKPFGRLWWDEIVNTVVTRAEPHNQCVIHPMQERVLSVRENARLQG 712
Query: 769 FPDCYQLFGPVKER 782
FPDCY+L G +KE+
Sbjct: 713 FPDCYKLCGSIKEK 726
>gi|359474666|ref|XP_002267685.2| PREDICTED: uncharacterized protein LOC100255190 [Vitis vinifera]
Length = 1789
Score = 769 bits (1986), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/731 (52%), Positives = 496/731 (67%), Gaps = 28/731 (3%)
Query: 71 FFVSPPVSADEALKRYPDRYKAL------------NEEEEVLQARCHYTQASVDGCLYNL 118
FF+ PV EA +R+ RY NEEE V CHYTQA +DG ++NL
Sbjct: 1023 FFIGDPVPDKEAQERWHWRYDLKVEHNYFFFSADDNEEEIVTNVECHYTQAKLDGTIFNL 1082
Query: 119 GDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLS 178
GD A++K E G ++ RI+E F++ +GE YF+ +WFYRAEDTV+K+ A D+KR+F S
Sbjct: 1083 GDCAHIKGE-GEQKHVGRILEFFKTTEGEDYFRVQWFYRAEDTVMKEEAASHDKKRIFCS 1141
Query: 179 DVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNINNESNR 238
+ +DN L+CI+SK + E+ + L K +IPP D YYDMKY + + TF + +
Sbjct: 1142 TIMNDNSLDCIISKVNVLELTPRVSL--KLDSIPPFDYYYDMKYNVEYSTFHTLLSGKIS 1199
Query: 239 RD------SDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTR 292
+ S A++T + P + E++LLDLYSGCG MSTGLC+GA LS V LVT+
Sbjct: 1200 PNCIETPLSVANTTFPEDMDGCKP-DKAELALLDLYSGCGGMSTGLCLGAKLSCVNLVTK 1258
Query: 293 WAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFM 352
WA+D + AC+SLK NHPET+VRNE A+DFL LLKEW LC+ +++ ++ + N +
Sbjct: 1259 WALDFDKSACESLKLNHPETQVRNETAEDFLDLLKEWEMLCEQYALNLVERKSQSRSNVL 1318
Query: 353 SEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSED 412
+ + D V +E E+ +L+ +CYGDP++T K G+ FKVRWKGYGPSED
Sbjct: 1319 -----RTSKSNINSPHDIKVATDELEILKLVDICYGDPSETGKRGLKFKVRWKGYGPSED 1373
Query: 413 TWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALE 472
TWEPI+GLS C+E + +FV G +S ILP PGDVD ICGGPPCQG+SG+NRFRN + L
Sbjct: 1374 TWEPIEGLSNCQEGIYDFVRNGLKSKILPRPGDVDVICGGPPCQGISGYNRFRNVDSPLS 1433
Query: 473 DIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAA 532
D +N Q+++FMD++++LKPKYVLMENVVD+LK L RYA+ RLV M YQ RLG++AA
Sbjct: 1434 DERNHQIVIFMDIVKFLKPKYVLMENVVDLLKLDKASLGRYAISRLVHMKYQARLGMIAA 1493
Query: 533 GSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEK 592
G YGLPQFRLRVFLWGA P + LPQ+PLPTH++VA+ P+EF+ IVAY QP +LEK
Sbjct: 1494 GCYGLPQFRLRVFLWGAHPGESLPQFPLPTHDVVAKYWPPSEFECNIVAYDEGQPRELEK 1553
Query: 593 GVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMA-SRPSLL 651
V+L DAISDLP VTN E+ DE YG TEFQKYIR + + SS+ + S+L
Sbjct: 1554 AVVLRDAISDLPAVTNYETRDEMLYGKPPETEFQKYIRSTKDAMAGSSSSGITKGYNSIL 1613
Query: 652 YDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVP 711
YDHRP+ +N D+Y R+C IP+RKGANFRDL GV+VG DN DP+M+ ++L SG PLVP
Sbjct: 1614 YDHRPYPLNEDNYLRICQIPRRKGANFRDLSGVIVGTDNVAVRDPTMKPILLPSGHPLVP 1673
Query: 712 DYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPD 771
D +E S +PF RLWWDE V TV+T N+ +LHP QDRVLTIRE ARLQGFPD
Sbjct: 1674 DCVFSYEQGKSKRPFARLWWDETVPTVLTFPYLRNQAILHPEQDRVLTIRECARLQGFPD 1733
Query: 772 CYQLFGPVKER 782
Y+ G VKER
Sbjct: 1734 YYRFRGTVKER 1744
>gi|411012961|gb|AFV99137.1| CMT-type cytosine DNA-methyltransferase 3c [Malus x domestica]
Length = 974
Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/734 (53%), Positives = 487/734 (66%), Gaps = 71/734 (9%)
Query: 72 FVSPPVSADEALKRYPDRYKA----------LNEEEEVLQARCHYTQASVDGCLYNLGDD 121
F+ P+ +EA K+YP RY N++E+++QARCHYT+A VDG Y+L DD
Sbjct: 233 FIGKPMEDEEARKQYPKRYAGEKPQRNGQNNSNDDEDIIQARCHYTKALVDGISYDLYDD 292
Query: 122 AYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVE 181
A+V+ E YI +IVE+FE++ G YF A+W+YR+ DTVIK A V RVF SDV
Sbjct: 293 AHVQGETKEEPYICKIVEMFEAIGGLLYFTAQWYYRSRDTVIKHCA-TVACGRVFFSDVR 351
Query: 182 DDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNINNESNRRDS 241
DDNPL+C+V K I + N+D + K K+IP C+ Y D KY LP+ TF+N+ E+ + S
Sbjct: 352 DDNPLDCLVEKLHIVRLTLNVDEDVKSKSIPVCNYYCDTKYLLPYSTFVNLPTENMQSGS 411
Query: 242 DASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHA 301
D STIS E + LD +S G+C + RWA+D N A
Sbjct: 412 D-DSTISVE----------DDVCLDSEVD-SKLSNGVCAKSE--------RWAVDYNEXA 451
Query: 302 CKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSE------- 354
CKSL+ NHPET+VRNEAA+DFL++LKEW KLC + +TD + E M E
Sbjct: 452 CKSLEQNHPETEVRNEAAEDFLTMLKEWRKLCMCLKLVETDNLEEDVEKSMLEFFRKEDD 511
Query: 355 ------EEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYG 408
EEEEE+ ENDD +E FEV+ ++ VC+GDP K +K G+YFK+ WKGYG
Sbjct: 512 EVEXEGEEEEEDVSGNENDD-----SEVFEVDCVVGVCFGDPKKNEKKGIYFKIHWKGYG 566
Query: 409 PSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQ 468
P EDTWEP+ L CK+ +K F+T+GYR LPLPGDVD +CGGPPCQGVSGFNRFRN +
Sbjct: 567 PEEDTWEPMNELEHCKKAIKGFITEGYRLKKLPLPGDVDVVCGGPPCQGVSGFNRFRNTE 626
Query: 469 AALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLG 528
+ L D KN+QL V+MD++ YLKPK+VLMENVVDILKF+ GFL RYA+GRLV M+YQ R+G
Sbjct: 627 SPLADEKNQQLEVYMDIVRYLKPKFVLMENVVDILKFADGFLGRYALGRLVDMNYQARMG 686
Query: 529 IMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPC 588
+MAAG+YGLPQFR+RVFLWGARP + LPQYPLPTH++++RGVIP +F+ VAY Q
Sbjct: 687 MMAAGAYGLPQFRMRVFLWGARPTEILPQYPLPTHDVISRGVIPTQFEGNAVAYDEGQKT 746
Query: 589 QLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRP 648
QL K + L DAISDLP N D GT QK
Sbjct: 747 QLAKSLFLEDAISDLPAKLINILFDADLMGTSKDNSLQK--------------------- 785
Query: 649 SLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKP 708
+LYDHRP Q+N DDY RVC +PKRKGA FRD PGV V DNKV WDP + RV L SGKP
Sbjct: 786 -VLYDHRPLQLNPDDYARVCEVPKRKGACFRDFPGVRVRGDNKVEWDPEVPRVYLASGKP 844
Query: 709 LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQG 768
LVPDYAM F SS+KPF RLWWDE V TVVTRA+PHN+ ++HP QDRVLTIRENARLQG
Sbjct: 845 LVPDYAMSFVKGSSSKPFARLWWDETVPTVVTRAEPHNQAIMHPEQDRVLTIRENARLQG 904
Query: 769 FPDCYQLFGPVKER 782
FPD Y+L GPVKER
Sbjct: 905 FPDFYRLSGPVKER 918
>gi|449456909|ref|XP_004146191.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Cucumis
sativus]
gi|449512953|ref|XP_004164187.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Cucumis
sativus]
Length = 1243
Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/731 (51%), Positives = 498/731 (68%), Gaps = 37/731 (5%)
Query: 71 FFVSPPVSADEALKRYPDRYKALN--------------EEEEVLQARCHYTQASVDGCLY 116
FFV PV ADEA +R+ RY+ N E+ V+ CHYTQA++ ++
Sbjct: 473 FFVGDPVPADEAQQRWKWRYEMKNQITKEQKVTESDDDEDMIVVNVDCHYTQANIGNTVF 532
Query: 117 NLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVF 176
+LGD Y+K E G +++ I+E F++ DG+ YF+ +WFYR EDTVI++ D +R+F
Sbjct: 533 SLGDCVYIKGE-GEKNHVGTIIEFFKTTDGDNYFRGQWFYRVEDTVIQEEGAFHDPRRLF 591
Query: 177 LSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNI-NNE 235
S V +DNPL+CIVSK I V + K + D YYDM+Y + + TF + N E
Sbjct: 592 YSTVMNDNPLDCIVSKVNIKRVKPRVG--QKSNSASSYDFYYDMEYCVEYSTFRTLKNGE 649
Query: 236 SNRRDSDASS-TISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWA 294
S D T +S T N P + E+ LLDL+SGCG MSTGLC+GA LS + L++RWA
Sbjct: 650 SPTNCIDTPHVTSTSNTFENMP-KKAELELLDLFSGCGGMSTGLCLGAKLSSIDLISRWA 708
Query: 295 IDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTD---KVPEQSLNF 351
+D + AC+SL+ NHPET VRNE A+DFL LLKEW KLC+ + +++ ++ ++ ++
Sbjct: 709 VDSHMSACESLRLNHPETHVRNETAEDFLDLLKEWEKLCRRYKANESEGSHQLRSKANDY 768
Query: 352 MSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSE 411
++ ++E+E P EFEV L+ +CYGDP +T K G+ F VRWKGYGPSE
Sbjct: 769 LTSSDDEDE-----------FPTSEFEVSSLVDICYGDPTRTGKRGLMFLVRWKGYGPSE 817
Query: 412 DTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAAL 471
DTWEPI+GLS C+E ++ FV +G ILPLPGDVD ICGGPPCQG+SG+NRFRN +
Sbjct: 818 DTWEPIEGLSNCQEAIQNFVKRGLGEKILPLPGDVDVICGGPPCQGISGYNRFRNTDCPM 877
Query: 472 EDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMA 531
+D +NRQ+++FMD++++LKPKYVLMENV DIL+F+ L RYAV RLV M+YQ RLG +A
Sbjct: 878 DDERNRQIVIFMDIVKFLKPKYVLMENVTDILRFNQASLGRYAVSRLVHMNYQARLGTIA 937
Query: 532 AGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLE 591
AG +GLPQFRLRVFLWGARP +KLPQ+PLPTHE++ R P EF+ VAY NQP QLE
Sbjct: 938 AGCFGLPQFRLRVFLWGARPSEKLPQFPLPTHEVIVRYWPPPEFERNTVAYDENQPRQLE 997
Query: 592 KGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLL 651
K V+L DA+SDLP V+N+ES ++ Y TEFQ+YIR ++++ + ++ L
Sbjct: 998 KAVVLQDALSDLPAVSNSESWEKMPYEKPPETEFQRYIRSSKYEMTGCETDNRST--DTL 1055
Query: 652 YDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVP 711
YDH+P + DD+ RVC IPKRKGANFRDLPGV+VG DN VR DP+ E V+L SGK +VP
Sbjct: 1056 YDHQPHLLGEDDHLRVCNIPKRKGANFRDLPGVIVGSDNVVRRDPANE-VLLPSGKLMVP 1114
Query: 712 DYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPD 771
DYA+ FE S +PFGRLWWDE V TVVT H+ + LHP QDRVLTIRE ARLQGFPD
Sbjct: 1115 DYAISFEQGRSKRPFGRLWWDETVPTVVTFPSCHSSVALHPEQDRVLTIREYARLQGFPD 1174
Query: 772 CYQLFGPVKER 782
Y+ G VKER
Sbjct: 1175 YYKFSGSVKER 1185
>gi|226088550|dbj|BAH37020.1| chromomethylase OsMET2b [Oryza sativa Japonica Group]
Length = 690
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/692 (55%), Positives = 482/692 (69%), Gaps = 30/692 (4%)
Query: 111 VDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLV 170
VD +Y+L DD YVKA +YI RI E FE VD YF +WF+R DTVI V
Sbjct: 1 VDDEIYHLDDDVYVKAGPDEENYIGRITEFFEGVDRGSYFSCQWFFRTADTVISSKLLKV 60
Query: 171 -----DRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLP 225
+ KRVFLS ++DN + CIVSK KIA V NM +A+ I CDLYYDM Y++
Sbjct: 61 HDHRHNHKRVFLSKEKNDNLIECIVSKVKIAHVDPNMTPQARAHAISDCDLYYDMSYSVA 120
Query: 226 HLTFLNINNESNRR-DSDASSTISSETGSNSPIGQ-------------PEMSLLDLYSGC 271
+ TF N+ +++ S+A+S IS + NS G+ SLLDLYSGC
Sbjct: 121 YSTFANLPADNDGALGSEATSNISCDDADNSSKGKLSADIVAPYSEQTETASLLDLYSGC 180
Query: 272 GAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAK 331
GAMSTGLC+G + SG+ L TRWA+DIN +AC LK NHP ++VRNE +DFL+L+++W
Sbjct: 181 GAMSTGLCLGFAFSGINLETRWAVDINKYACACLKHNHPYSQVRNEKTEDFLALIQQWDA 240
Query: 332 LCQYFSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPN 391
LC+ + ++ D + E S++ + ++ E +P + F+VE L+ +CYGDP+
Sbjct: 241 LCRKYVVHKNDTL-EPSIDMPLNDADDVNEP---------LPEDIFDVEELLEICYGDPS 290
Query: 392 KTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICG 451
T K G++FKVRWKGY PS DTWEPI GLS C E++KEFV KG++ NILPLPG VD ICG
Sbjct: 291 NTGKNGLWFKVRWKGYDPSYDTWEPIDGLSDCPERIKEFVEKGHKENILPLPGAVDVICG 350
Query: 452 GPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLA 511
GPPCQG+SGFNRFR LED KN+QL+VFMD+++YL+PKYVLMENVVDILKF+ GFL
Sbjct: 351 GPPCQGISGFNRFRKHNDPLEDEKNKQLVVFMDIVKYLRPKYVLMENVVDILKFADGFLG 410
Query: 512 RYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVI 571
RYA+ LV+M+YQ RLG+MAAG YGLPQFR+R FLWGA P LP++PLPTH+ V RG++
Sbjct: 411 RYAMSCLVAMNYQARLGMMAAGYYGLPQFRMRAFLWGALPSMVLPKFPLPTHDAVVRGIV 470
Query: 572 PNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRL 631
P F + +VAY L K +LL+DAISDLP V N++ +D +Y +TEFQ+YIR
Sbjct: 471 PTTFSQSVVAYNEVDTRCLRKALLLADAISDLPKVGNDQPKDVIEYSVAPKTEFQRYIRN 530
Query: 632 RRHDVVNLS-SAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDN 690
R D+ + S S L+DH+P ++N DDYERV IP +KGANFRDL GV+VGPDN
Sbjct: 531 NRKDIQDYSFRGDDPSEEGKLFDHQPLKLNKDDYERVQRIPVKKGANFRDLKGVIVGPDN 590
Query: 691 KVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILL 750
VR DP++ R L SGKPLVPDYA+ F STKPFGRLWWDE V TVVTRA+PHN+I+L
Sbjct: 591 TVRLDPNISRERLSSGKPLVPDYAISFVKGKSTKPFGRLWWDETVPTVVTRAEPHNQIIL 650
Query: 751 HPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
HPSQDRVLTIRENARLQGFPD Y+L GP+KE+
Sbjct: 651 HPSQDRVLTIRENARLQGFPDYYRLIGPLKEK 682
>gi|356560887|ref|XP_003548718.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Glycine max]
Length = 1143
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/750 (50%), Positives = 502/750 (66%), Gaps = 47/750 (6%)
Query: 67 DSDLF--FVSPPVSADEALKRYPDRYK------------------ALNEEEE---VLQAR 103
DS+ F F+ P+ DEA KR+ RY+ +NE EE + +
Sbjct: 306 DSENFPSFIGDPIPDDEAQKRWGWRYELKVVDLILSDKKCKDNMFKINEGEEDEIIANVK 365
Query: 104 CHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVI 163
CHY QA + C+++LGD A+VK E G ++ +I+E F++ DG+ YF+ +WFYR +DTV+
Sbjct: 366 CHYAQAEIGNCIFSLGDCAFVKGE-GEEKHVGKIIEFFQTTDGQNYFRVQWFYRIQDTVV 424
Query: 164 KDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYT 223
+D D++RVF S + +DN ++CI+ KA + + + L K +I D YYDM+Y
Sbjct: 425 QDEGGFHDKRRVFYSAIMNDNLIDCIMGKANVTHITPRVGL--KLASISSSDFYYDMEYC 482
Query: 224 LPHLTFLNINNESNRRD-----------SDASSTISSETGSNSPIGQPEMSLLDLYSGCG 272
+ + TF +NN + +DAS+ S+ S + + E++LLDLYSGCG
Sbjct: 483 VDYSTFRTLNNPVKTNELSPPSVLESLSTDASTVTESQPCSE--LNKTELALLDLYSGCG 540
Query: 273 AMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKL 332
MSTGLC+GA + V LVTRWA+D + A +SLK NH +T VRNE+A+DFL LLK W KL
Sbjct: 541 GMSTGLCLGAKTASVNLVTRWAVDSDRSAGESLKLNHSDTHVRNESAEDFLELLKAWEKL 600
Query: 333 CQYFSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNK 392
C+ +++ T E+ L F S ++ E + + + E EV +L+ +C+GDPN+
Sbjct: 601 CKRYNVSST----ERKLPFRSNSSGAKKRGNSEVHE---ISDGELEVSKLVDICFGDPNE 653
Query: 393 TKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGG 452
T K G+Y KV WKGY SEDTWEPIK LSKCKE +++FV KG +SNILPLPG+VD ICGG
Sbjct: 654 TGKRGLYLKVHWKGYSASEDTWEPIKSLSKCKESMQDFVRKGMKSNILPLPGEVDVICGG 713
Query: 453 PPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLAR 512
PPCQG+SG+NRFRN + L+D +NRQ+++FMD++++LKP+YVLMENVVDIL+F G L R
Sbjct: 714 PPCQGISGYNRFRNCASPLDDERNRQIVIFMDMVKFLKPRYVLMENVVDILRFDKGSLGR 773
Query: 513 YAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIP 572
YA+ RLV M+YQ RLGI+AAG YGLPQFRLRVFLWGA P + +PQ+PLPTH+++ R P
Sbjct: 774 YALSRLVHMNYQARLGIIAAGCYGLPQFRLRVFLWGAHPSEVIPQFPLPTHDVIVRYWPP 833
Query: 573 NEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLR 632
EF+ +VAY QP +LEK ++ DAISDLP V N E+ DE Y TEFQ+YIR
Sbjct: 834 PEFERNVVAYDEEQPRELEKATVIQDAISDLPAVMNTETRDEMPYQNPPETEFQRYIRST 893
Query: 633 RHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKV 692
++++ S + LLYDHRP+ + DDY RVC IPKRKGANFRDLPGV+VG DN V
Sbjct: 894 KYEMTGSKSNGTTEKRPLLYDHRPYFLFEDDYLRVCQIPKRKGANFRDLPGVIVGADNVV 953
Query: 693 RWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHP 752
R P+ E +L SGKPLVP+Y FEH S +PF RLWWDE + T +T HN+++LHP
Sbjct: 954 RRHPT-ENPLLPSGKPLVPEYCFTFEHGKSKRPFARLWWDENLPTALTFPSCHNQVVLHP 1012
Query: 753 SQDRVLTIRENARLQGFPDCYQLFGPVKER 782
QDRVLTIRE ARLQGFPD Y+ +G VKER
Sbjct: 1013 EQDRVLTIREFARLQGFPDYYRFYGTVKER 1042
>gi|68655470|emb|CAJ01708.1| chromomethylase 1 [Hordeum vulgare subsp. vulgare]
Length = 735
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/680 (55%), Positives = 477/680 (70%), Gaps = 27/680 (3%)
Query: 108 QASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLA 167
+A VD Y LGDD YV A E DYI RI E FE VD YF RWF+R EDTVI
Sbjct: 11 EAKVDDVDYTLGDDVYVMAGENEADYIGRITEFFEGVDKTNYFTCRWFFRPEDTVISRAK 70
Query: 168 CLVDR----KRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYT 223
+ D KRVFLS+ ++DNPL+CI+SK KI V N D K K + DLYYDM Y+
Sbjct: 71 FVNDHTHDPKRVFLSEEKNDNPLDCIISKVKIIHVDPNTDSVTKAKLVAGTDLYYDMSYS 130
Query: 224 LPHLTFLNINNESNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGAS 283
+ + TF NI + D+ +S IS++ S + SLLDLYSGCG MSTGLC+G++
Sbjct: 131 VAYSTFANIPS-----DTTENSGISTDADSENGTPVKTASLLDLYSGCGGMSTGLCLGSA 185
Query: 284 LSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDK 343
L+G+KL T+WA+D+N ACKSLK+NHP+T+VRNE A+DFL+LLKEW LC DK
Sbjct: 186 LAGLKLETKWAVDLNSFACKSLKYNHPKTEVRNEKAEDFLALLKEWVILC--------DK 237
Query: 344 VPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVR 403
++ + + E EE +DD + +EF V++L+ +CYG +K G+YFKV+
Sbjct: 238 -------YVHGNDSDAAEPVEEEEDDEPLGKDEFVVQKLLGICYG--GSGRKNGIYFKVQ 288
Query: 404 WKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNR 463
WKGYGP EDTWEPI+ LS C K+KEFV +GY+ NILP PG VD ICGGPPCQG+SGFNR
Sbjct: 289 WKGYGPEEDTWEPIENLSDCPLKIKEFVQEGYKRNILPQPGQVDVICGGPPCQGISGFNR 348
Query: 464 FRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDY 523
FRN L+D KN+Q++ +MD++ YL+PK+VLMENVVDILKF+ G+L RYA+ RLVS++Y
Sbjct: 349 FRNRDNPLQDEKNQQMVTYMDIVSYLQPKFVLMENVVDILKFADGYLGRYALSRLVSLNY 408
Query: 524 QTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYA 583
Q RLG+M AG YGLPQFR+RVFLWG+ P LP+YPLPTH++V RG PN F + IVAY
Sbjct: 409 QARLGMMVAGCYGLPQFRMRVFLWGSLPTMVLPKYPLPTHDVVVRGGAPNAFSQSIVAYD 468
Query: 584 NNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSA- 642
Q L+K +LL DAISDLP V N + + +Y +TEFQ+YIRL R D+++ S
Sbjct: 469 ETQRPILKKALLLGDAISDLPKVDNYQPHEVIEYRGQPKTEFQRYIRLSRKDMLDYSFGD 528
Query: 643 QMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVM 702
L DH+P ++N DDY+RV IP +KGAN RDLPGV VG +N V WDP +ERV
Sbjct: 529 DTCPEEGKLLDHQPLRLNQDDYDRVQQIPIKKGANSRDLPGVKVGANNIVEWDPEVERVY 588
Query: 703 LKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRE 762
LKSGKPLVPDYAM F S KPFGRLWWDE V TVVTRA+PHN+I+LHP+Q RVLT+RE
Sbjct: 589 LKSGKPLVPDYAMSFIKGRSPKPFGRLWWDETVPTVVTRAEPHNQIILHPNQGRVLTVRE 648
Query: 763 NARLQGFPDCYQLFGPVKER 782
NARLQGFPD Y++ GP+KE+
Sbjct: 649 NARLQGFPDYYRMNGPMKEK 668
>gi|2766713|gb|AAB95485.1| chromomethylase [Arabidopsis thaliana]
gi|2865414|gb|AAC02659.1| chromomethylase [Arabidopsis thaliana]
Length = 791
Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/744 (51%), Positives = 520/744 (69%), Gaps = 28/744 (3%)
Query: 59 KKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALN-----------------EEEEVL- 100
K+ ++ +P+SDL F P+S E+ R+P RY++ E+EE++
Sbjct: 6 KQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQSKKTKLQAPTKKPANKGGKKEDEEIIK 65
Query: 101 QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAED 160
QA+CH+ +A VDG L NL DD YV G + +IA+++ELFE+ DG PY + RW+YR ED
Sbjct: 66 QAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRWYYRPED 125
Query: 161 TVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAT-NMDLEAKQKNIPPCDLYYD 219
T+I+ + LV KRVFLS+ E+DNPL CI SK IA+V + +Q+ IPPCD YYD
Sbjct: 126 TLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRIEQRVIPPCDYYYD 185
Query: 220 MKYTLPHLTFLNINNESNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLC 279
MKY +P+L F++ + D+ +S + S + + E LLDLYSGCGAMSTG C
Sbjct: 186 MKYEVPYLNFIS---ADDGSDASSSLSSDSALNCFENLHKDEKFLLDLYSGCGAMSTGFC 242
Query: 280 IGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIY 339
+GAS+SGVKL+T+W++DIN AC SLK NHPET+VRNEAA+DFL+LLKEW +LC+ FS+
Sbjct: 243 MGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFLALLKEWKRLCEKFSLV 302
Query: 340 DTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVY 399
+ + P +S++ + +EE EE ++ +E A + EFEVE+ + + +GDP T + +
Sbjct: 303 SSTE-PVESISELEDEEVEENDDIDEASTGAELEPGEFEVEKFLGIMFGDPQGTGEKTLQ 361
Query: 400 FKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVS 459
VRWKGY S DTWEP GL CKEKLKE+V G++S++LPLPG V +CGGPPCQG+S
Sbjct: 362 LMVRWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLPGTVYTVCGGPPCQGIS 421
Query: 460 GFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLV 519
G+NR+RN +A LED KN+QLLVF+D+I++LKP YVLMENVVD+L+FS GFLAR+AV V
Sbjct: 422 GYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFV 481
Query: 520 SMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEII 579
+M+YQTRLG+MAAGSYGLPQ R RVFLW A+P +KLP YPLPTHE+ + P EF+++
Sbjct: 482 AMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKKFNTPKEFKDLQ 541
Query: 580 VAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVA-RTEFQKYIRLRRHDVVN 638
V + +L+ + L+DAISDLP VTN + D Y A +TEF+ +I L+R + +
Sbjct: 542 VGRIQMEFLKLDNALTLADAISDLPPVTNYVANDVMDYNDAAPKTEFENFISLKRSETLL 601
Query: 639 LSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSM 698
+ +R L+DH+P + +DD ERV IPK+KGAN+RD+PGVLV +NK +P
Sbjct: 602 PACGGDPTR--RLFDHQPLVLGDDDLERVSYIPKQKGANYRDMPGVLVH-NNKAEINPRF 658
Query: 699 ERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVL 758
R LKSGK +VP YA+ F S KPFGRLW DEIVNTVVTRA+PHN+ ++HP Q+RVL
Sbjct: 659 -RAKLKSGKNVVPAYAISFIKGKSKKPFGRLWGDEIVNTVVTRAEPHNQCVIHPMQNRVL 717
Query: 759 TIRENARLQGFPDCYQLFGPVKER 782
++RENARLQGFPDCY+L G +KE+
Sbjct: 718 SVRENARLQGFPDCYKLCGTIKEK 741
>gi|2865422|gb|AAC02663.1| chromomethylase [Arabidopsis thaliana]
Length = 791
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/744 (51%), Positives = 519/744 (69%), Gaps = 28/744 (3%)
Query: 59 KKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALN-----------------EEEEVL- 100
K+ ++ +P+SDL F P+S E+ R+P RY++ E+EE++
Sbjct: 6 KQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQSKKTKLQAPTKKPANKGGKKEDEEIIK 65
Query: 101 QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAED 160
QA+CH+ +A VDG L NL DD YV G + +IA+++ELFE+ DG PY + RW+YR ED
Sbjct: 66 QAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRWYYRPED 125
Query: 161 TVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAT-NMDLEAKQKNIPPCDLYYD 219
T+I+ + LV KRVFLS+ E+DNPL CI SK IA+V + +Q+ IPPCD YYD
Sbjct: 126 TLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRIEQRVIPPCDYYYD 185
Query: 220 MKYTLPHLTFLNINNESNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLC 279
MKY +P +LN + + D+ +S + S + + E LLDLYSGCGAMSTG C
Sbjct: 186 MKYEVP---YLNFTSADDGSDASSSLSSDSALNCFENLHKDEKFLLDLYSGCGAMSTGFC 242
Query: 280 IGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIY 339
+GAS+SGVKL+T+W++DIN AC SLK NHPET+VRNEAA+DFL+LLKEW +LC+ FS+
Sbjct: 243 MGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFLALLKEWKRLCEKFSLV 302
Query: 340 DTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVY 399
+ + P +S++ + +EE EE ++ +E A + EFEVE+ + + +GDP T + +
Sbjct: 303 SSTE-PVESISELEDEEVEENDDIDEASTGAELEPGEFEVEKFLGIMFGDPQGTGEKTLQ 361
Query: 400 FKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVS 459
VRWKGY S DTWEP GL CKEKLKE+V G++S++LPLPG V +CGGPPCQG+S
Sbjct: 362 LMVRWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLPGTVYTVCGGPPCQGIS 421
Query: 460 GFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLV 519
G+NR+RN +A LED KN+QLLVF+D+I++LKP YVLMENVVD+L+FS GFLAR+AV V
Sbjct: 422 GYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFV 481
Query: 520 SMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEII 579
+M+YQTRLG+MAAGSYGLPQ R RVFLW A+P +KLP YPLPTHE+ + P EF+++
Sbjct: 482 AMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKKFNTPKEFKDLQ 541
Query: 580 VAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVA-RTEFQKYIRLRRHDVVN 638
V + +L+ + L+DAISDLP VTN + D Y A +TEF+ +I L+R + +
Sbjct: 542 VGRIQMEFLKLDNALTLADAISDLPPVTNYVANDVMDYNDAAPKTEFENFISLKRSETLL 601
Query: 639 LSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSM 698
+ +R L+DH+P + +DD ERV IPK+KGAN+RD+PGVLV +NK +P
Sbjct: 602 PACGGDPTR--RLFDHQPLVLGDDDLERVSYIPKQKGANYRDMPGVLVH-NNKAEINPRF 658
Query: 699 ERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVL 758
R LKSGK +VP YA+ F S KPFGRLW DEIVNTVVTRA+PHN+ ++HP Q+RVL
Sbjct: 659 -RAKLKSGKNVVPAYAISFIKGKSKKPFGRLWGDEIVNTVVTRAEPHNQCVIHPMQNRVL 717
Query: 759 TIRENARLQGFPDCYQLFGPVKER 782
++RENARLQGFPDCY+L G +KE+
Sbjct: 718 SVRENARLQGFPDCYKLCGTIKEK 741
>gi|2865420|gb|AAC02662.1| chromomethylase [Arabidopsis thaliana]
Length = 754
Score = 747 bits (1928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/744 (51%), Positives = 519/744 (69%), Gaps = 28/744 (3%)
Query: 59 KKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALN-----------------EEEEVL- 100
K+ ++ +P+SDL F P+S E+ R+P RY++ E+EE++
Sbjct: 6 KQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQSKKTKLQAPTKKPANKGGKKEDEEIIK 65
Query: 101 QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAED 160
QA+CH+ +A VDG L NL DD YV G + +IA+++ELFE+ DG PY + RW+YR ED
Sbjct: 66 QAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRWYYRPED 125
Query: 161 TVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAT-NMDLEAKQKNIPPCDLYYD 219
T+I+ + LV KRVFLS+ E+DNPL CI SK IA+V + +Q+ IPPCD YYD
Sbjct: 126 TLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRIEQRVIPPCDYYYD 185
Query: 220 MKYTLPHLTFLNINNESNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLC 279
MKY +P +LN + + D+ +S + S + + E LLDLYSGCGAMSTG C
Sbjct: 186 MKYEVP---YLNFTSADDGSDASSSLSSDSALNCFENLHKDEKFLLDLYSGCGAMSTGFC 242
Query: 280 IGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIY 339
+GAS+SGVKL+T+W++DIN AC SLK NHPET+VRNEAA+DFL+LLKEW +LC+ FS+
Sbjct: 243 MGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFLALLKEWKRLCEKFSLV 302
Query: 340 DTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVY 399
+ + P +S++ + +EE EE ++ +E A + EFEVE+ + + +GDP T + +
Sbjct: 303 SSTE-PVESISELEDEEVEENDDIDEASTGAELEPGEFEVEKFLGIMFGDPQGTGEKTLQ 361
Query: 400 FKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVS 459
VRWKGY S DTWEP GL CKEKLKE+V G++S++LPLPG V +CGGPPCQG+S
Sbjct: 362 LMVRWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLPGTVYTVCGGPPCQGIS 421
Query: 460 GFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLV 519
G+NR+RN +A LED KN+QLLVF+D+I++LKP YVLMENVVD+L+FS GFLAR+AV V
Sbjct: 422 GYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFV 481
Query: 520 SMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEII 579
+M+YQTRLG+MAAGSYGLPQ R RVFLW A+P +KLP YPLPTHE+ + P EF+++
Sbjct: 482 AMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKKFNTPKEFKDLQ 541
Query: 580 VAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVA-RTEFQKYIRLRRHDVVN 638
V + +L+ + L+DAISDLP VTN + D Y A +TEF+ +I L+R + +
Sbjct: 542 VGRIQMEFLKLDNALTLADAISDLPPVTNYVANDVMDYNDAAPKTEFENFISLKRSETLL 601
Query: 639 LSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSM 698
+ +R L+DH+P + +DD ERV IPK+KGAN+RD+PGVLV +NK +P
Sbjct: 602 PACGGDPTR--RLFDHQPLVLGDDDLERVSYIPKQKGANYRDMPGVLVH-NNKAEINPRF 658
Query: 699 ERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVL 758
R LKSGK +VP YA+ F S KPFGRLW DEIVNTVVTRA+PHN+ ++HP Q+RVL
Sbjct: 659 -RAKLKSGKNVVPAYAISFIKGKSKKPFGRLWGDEIVNTVVTRAEPHNQCVIHPMQNRVL 717
Query: 759 TIRENARLQGFPDCYQLFGPVKER 782
++RENARLQGFPDCY+L G +KE+
Sbjct: 718 SVRENARLQGFPDCYKLCGTIKEK 741
>gi|18412893|ref|NP_565245.1| putative DNA (cytosine-5)-methyltransferase CMT1 [Arabidopsis
thaliana]
gi|110832797|sp|O49139.2|CMT1_ARATH RecName: Full=Putative DNA (cytosine-5)-methyltransferase CMT1;
AltName: Full=Chromomethylase 1; AltName: Full=Protein
CHROMOMETHYLASE 1
gi|6503286|gb|AAF14662.1|AC011713_10 Identical to gb|AF039367 ecotype Col-0 chromomethylase (CMT1) gene
from Arabidopsis thaliana [Arabidopsis thaliana]
gi|2865416|gb|AAC02660.1| chromomethylase [Arabidopsis thaliana]
gi|332198321|gb|AEE36442.1| putative DNA (cytosine-5)-methyltransferase CMT1 [Arabidopsis
thaliana]
Length = 791
Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/744 (51%), Positives = 519/744 (69%), Gaps = 28/744 (3%)
Query: 59 KKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALN-----------------EEEEVL- 100
K+ ++ +P+SDL F P+S E+ R+P RY++ E+EE++
Sbjct: 6 KQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQSKKTKLQAPTKKPANKGGKKEDEEIIK 65
Query: 101 QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAED 160
QA+CH+ +A VDG L NL DD YV G + +IA+++ELFE+ DG PY + RW+YR ED
Sbjct: 66 QAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRWYYRPED 125
Query: 161 TVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAT-NMDLEAKQKNIPPCDLYYD 219
T+I+ + LV KRVFLS+ E+DNPL CI SK IA+V + +Q+ IPPCD YYD
Sbjct: 126 TLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRIEQRVIPPCDYYYD 185
Query: 220 MKYTLPHLTFLNINNESNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLC 279
MKY +P +LN + + D+ +S + S + + E LLDLYSGCGAMSTG C
Sbjct: 186 MKYEVP---YLNFTSADDGSDASSSLSSDSALNCFENLHKDEKFLLDLYSGCGAMSTGFC 242
Query: 280 IGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIY 339
+GAS+SGVKL+T+W++DIN AC SLK NHPET+VRNEAA+DFL+LLKEW +LC+ FS+
Sbjct: 243 MGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFLALLKEWKRLCEKFSLV 302
Query: 340 DTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVY 399
+ + P +S++ + +EE EE ++ +E A + EFEVE+ + + +GDP T + +
Sbjct: 303 SSTE-PVESISELEDEEVEENDDIDEASTGAELEPGEFEVEKFLGIMFGDPQGTGEKTLQ 361
Query: 400 FKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVS 459
VRWKGY S DTWEP GL CKEKLKE+V G++S++LPLPG V +CGGPPCQG+S
Sbjct: 362 LMVRWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLPGTVYTVCGGPPCQGIS 421
Query: 460 GFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLV 519
G+NR+RN +A LED KN+QLLVF+D+I++LKP YVLMENVVD+L+FS GFLAR+AV V
Sbjct: 422 GYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFV 481
Query: 520 SMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEII 579
+M+YQTRLG+MAAGSYGLPQ R RVFLW A+P +KLP YPLPTHE+ + P EF+++
Sbjct: 482 AMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKKFNTPKEFKDLQ 541
Query: 580 VAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVA-RTEFQKYIRLRRHDVVN 638
V + +L+ + L+DAISDLP VTN + D Y A +TEF+ +I L+R + +
Sbjct: 542 VGRIQMEFLKLDNALTLADAISDLPPVTNYVANDVMDYNDAAPKTEFENFISLKRSETLL 601
Query: 639 LSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSM 698
+ +R L+DH+P + +DD ERV IPK+KGAN+RD+PGVLV +NK +P
Sbjct: 602 PAFGGDPTR--RLFDHQPLVLGDDDLERVSYIPKQKGANYRDMPGVLVH-NNKAEINPRF 658
Query: 699 ERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVL 758
R LKSGK +VP YA+ F S KPFGRLW DEIVNTVVTRA+PHN+ ++HP Q+RVL
Sbjct: 659 -RAKLKSGKNVVPAYAISFIKGKSKKPFGRLWGDEIVNTVVTRAEPHNQCVIHPMQNRVL 717
Query: 759 TIRENARLQGFPDCYQLFGPVKER 782
++RENARLQGFPDCY+L G +KE+
Sbjct: 718 SVRENARLQGFPDCYKLCGTIKEK 741
>gi|2865433|gb|AAC02670.1| chromomethylase [Arabidopsis suecica]
Length = 754
Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/744 (51%), Positives = 519/744 (69%), Gaps = 28/744 (3%)
Query: 59 KKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALN-----------------EEEEVL- 100
K+ ++ +P+SDL F P+S E+ R+P RY++ E+EE++
Sbjct: 6 KQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQSKKTKLQAPTKKPANKGGKKEDEEIIK 65
Query: 101 QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAED 160
QA+CH+ +A VDG L NL DD YV G + +IA+++ELFE+ DG PY + RW+YR ED
Sbjct: 66 QAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRWYYRPED 125
Query: 161 TVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAT-NMDLEAKQKNIPPCDLYYD 219
T+I+ + LV KRVFLS+ E+DNPL CI SK IA+V + +Q+ IPPCD YYD
Sbjct: 126 TLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRIEQRVIPPCDYYYD 185
Query: 220 MKYTLPHLTFLNINNESNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLC 279
MKY +P +LN + + D+ +S + S + + E LLDLYSGCGAMSTG C
Sbjct: 186 MKYEVP---YLNFTSADDGSDASSSLSSDSALNCFENLHKDEKFLLDLYSGCGAMSTGFC 242
Query: 280 IGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIY 339
+GAS+SGVKL+T+W++DIN AC SLK NHPET+VRNEAA+DFL+LLKEW +LC+ FS+
Sbjct: 243 MGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFLALLKEWKRLCEKFSLV 302
Query: 340 DTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVY 399
+ + P +S++ + +EE EE ++ +E A + EFEVE+ + + +GDP T + +
Sbjct: 303 SSTE-PVESISELEDEEVEENDDIDEASTGAELEPGEFEVEKFLGIMFGDPQGTGEKTLQ 361
Query: 400 FKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVS 459
VRWKGY S DTWEP GL CKEKLKE+V G++S++LPLPG V +CGGPPCQG+S
Sbjct: 362 LMVRWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLPGIVYTVCGGPPCQGIS 421
Query: 460 GFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLV 519
G+NR+RN +A LED KN+QLLVF+D+I++LKP YVLMENVVD+L+FS GFLAR+AV V
Sbjct: 422 GYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFV 481
Query: 520 SMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEII 579
+M+YQTRLG+MAAGSYGLPQ R RVFLW A+P +KLP YPLPTHE+ + P EF+++
Sbjct: 482 AMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKKFNTPKEFKDLQ 541
Query: 580 VAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVA-RTEFQKYIRLRRHDVVN 638
V + +L+ + L+DAISDLP VTN + D Y A +TEF+ +I L+R + +
Sbjct: 542 VGRIQMEFLKLDNALTLADAISDLPPVTNYVANDVMDYNDAAPKTEFENFISLKRSETLL 601
Query: 639 LSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSM 698
+ +R L+DH+P + +DD ERV IPK+KGAN+RD+PGVLV +NK +P
Sbjct: 602 PACGGDPTR--RLFDHQPLVLGDDDLERVSYIPKQKGANYRDMPGVLVH-NNKAEINPRF 658
Query: 699 ERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVL 758
R LKSGK +VP YA+ F S KPFGRLW DEIVNTVVTRA+PHN+ ++HP Q+RVL
Sbjct: 659 -RAKLKSGKNVVPAYAISFIKGKSKKPFGRLWGDEIVNTVVTRAEPHNQCVIHPMQNRVL 717
Query: 759 TIRENARLQGFPDCYQLFGPVKER 782
++RENARLQGFPDCY+L G +KE+
Sbjct: 718 SVRENARLQGFPDCYKLCGTIKEK 741
>gi|255557861|ref|XP_002519960.1| protein with unknown function [Ricinus communis]
gi|223541006|gb|EEF42564.1| protein with unknown function [Ricinus communis]
Length = 734
Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/668 (54%), Positives = 466/668 (69%), Gaps = 21/668 (3%)
Query: 128 EGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLN 187
EG ++ RIVE F++ DGE YF+ +WFYRAEDTVIK+ A D+KR+F S + +DNP++
Sbjct: 18 EGGQKHVGRIVEFFKTTDGEDYFRVQWFYRAEDTVIKEEAGFHDKKRLFYSTIMNDNPID 77
Query: 188 CIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTF--LNINNESNRRDSDASS 245
CI+SK +I ++ + + + +I D Y+DM+Y + + +F L I RD+ +S
Sbjct: 78 CIISKVRIVQLPSMI---GSKSSIRSTDFYFDMEYNVDYSSFRTLLIGKHFCLRDNSSSP 134
Query: 246 TIS---SETGSNSPI--------GQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWA 294
+ S TG N+ + + E++LLDL+SGCG MSTGLC+GA +S V LVTRWA
Sbjct: 135 NVVEAVSTTGGNTSLENMRSSESNKAELALLDLFSGCGGMSTGLCLGAKVSCVDLVTRWA 194
Query: 295 IDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSE 354
+D N AC+SLK NHPET VRNEAA+DFL LLK W KLC+ +++ D K +QS + S
Sbjct: 195 LDSNKSACESLKLNHPETNVRNEAAEDFLELLKVWEKLCKRYAVKDI-KSMQQSRSIASR 253
Query: 355 EEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTW 414
EE + +ND + E+EV +L+ +CYGDP+ K G+ FKV WKGY SEDTW
Sbjct: 254 VAEENDNSLSDND----ITPGEYEVSKLVDLCYGDPDNIGKRGLKFKVHWKGYSTSEDTW 309
Query: 415 EPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDI 474
EP++GL C+E +++FV KG++S ILPLPGDVD ICGGPPCQG+SG+NRFRN A L D
Sbjct: 310 EPVEGLRNCQECIRDFVRKGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVNAPLSDE 369
Query: 475 KNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGS 534
+NRQ++VFMD++++LKPK+VLMENVVDILKF ARYA+ RLV M YQ RLG +AAG
Sbjct: 370 RNRQIVVFMDIVQFLKPKFVLMENVVDILKFDKASFARYALSRLVHMKYQARLGTIAAGC 429
Query: 535 YGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGV 594
YGLPQFRLRVFLWGA P +KLPQ+PLPTH+++ R PNEF+ VAY QP +LEK
Sbjct: 430 YGLPQFRLRVFLWGAHPSEKLPQFPLPTHDVIVRYWPPNEFERNTVAYDEGQPRELEKAA 489
Query: 595 LLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDH 654
+L DAISDLP VT +E+ +E Y TEFQ++IR H++ S +LL DH
Sbjct: 490 VLQDAISDLPPVTTHETREEMAYEKPPETEFQRFIRSTEHEMTGSSQRGTTQMNNLLSDH 549
Query: 655 RPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYA 714
RP+ + +D RVC IPKRKGANFRDLPG+LVG DN VR DP+ E+V+L SGKPLVPD+A
Sbjct: 550 RPYALTEEDCARVCLIPKRKGANFRDLPGILVGNDNVVRRDPTKEQVLLPSGKPLVPDFA 609
Query: 715 MKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQ 774
FE S +P+ RLWWDE V TVVT H++ +LHP QDR LTIRE ARLQGFPD Y+
Sbjct: 610 FTFEQGKSKRPYARLWWDETVPTVVTYPSIHSQAMLHPEQDRALTIRECARLQGFPDYYR 669
Query: 775 LFGPVKER 782
G VKER
Sbjct: 670 FSGTVKER 677
>gi|42566945|ref|NP_193637.2| chromomethylase 2 [Arabidopsis thaliana]
gi|322510132|sp|Q94F87.3|CMT2_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase CMT2; AltName:
Full=Chromomethylase 2; AltName: Full=Protein
CHROMOMETHYLASE 2
gi|332658726|gb|AEE84126.1| chromomethylase 2 [Arabidopsis thaliana]
Length = 1295
Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/747 (49%), Positives = 499/747 (66%), Gaps = 30/747 (4%)
Query: 54 VTRVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKAL-------------NEEEEVL 100
VTR + Q + S FF+ P+S +EA +R+ RY+ +E++ V
Sbjct: 507 VTRTAVQEQNKR--SICFFIGEPLSCEEAQERWRWRYELKERKSKSRGQQSEDDEDKIVA 564
Query: 101 QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAED 160
CHY+QA VDG ++LGD AY+K EE ++ +IVE F++ DGE YF+ +WFYRA D
Sbjct: 565 NVECHYSQAKVDGHTFSLGDFAYIKGEEEET-HVGQIVEFFKTTDGESYFRVQWFYRATD 623
Query: 161 TVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDM 220
T+++ A D++R+F S V +DNP++C++SK + +V+ + L+ N D Y+DM
Sbjct: 624 TIMERQATNHDKRRLFYSTVMNDNPVDCLISKVTVLQVSPRVGLKP---NSIKSDYYFDM 680
Query: 221 KYTLPHLTFLNINNESNRRD-----SDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMS 275
+Y + + TF + N + +D T S+E+ E+ +LDLYSGCG MS
Sbjct: 681 EYCVEYSTFQTLRNPKTSENKLECCADVVPTESTESILKKKSFSGELPVLDLYSGCGGMS 740
Query: 276 TGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQY 335
TGL +GA +SGV +VT+WA+D N ACKSLK NHP T+VRN+AA DFL LLKEW KLC+
Sbjct: 741 TGLSLGAKISGVDVVTKWAVDQNTAACKSLKLNHPNTQVRNDAAGDFLQLLKEWDKLCKR 800
Query: 336 FSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKK 395
+ +++ D Q + + +E + D + +EE+EVE+L+ +C+GD +KT K
Sbjct: 801 Y-VFNND----QRTDTLRSVNSTKETSGSSSSSDDDSDSEEYEVEKLVDICFGDHDKTGK 855
Query: 396 PGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPC 455
G+ FKV WKGY EDTWE + LS C++ ++EFVT G++S ILPLPG V ICGGPPC
Sbjct: 856 NGLKFKVHWKGYRSDEDTWELAEELSNCQDAIREFVTSGFKSKILPLPGRVGVICGGPPC 915
Query: 456 QGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAV 515
QG+SG+NR RN + L D +N+Q++VFMD++EYLKP YVLMENVVDIL+ G L RYA+
Sbjct: 916 QGISGYNRHRNVDSPLNDERNQQIIVFMDIVEYLKPSYVLMENVVDILRMDKGSLGRYAL 975
Query: 516 GRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEF 575
RLV+M YQ RLGIM AG YGL QFR RVF+WGA P K LP +PLPTH+++ R +P EF
Sbjct: 976 SRLVNMRYQARLGIMTAGCYGLSQFRSRVFMWGAVPNKNLPPFPLPTHDVIVRYGLPLEF 1035
Query: 576 QEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHD 635
+ +VAYA QP +LEK ++L DAISDLP V+N+E ++ Y ++ +T+FQ+YIR + D
Sbjct: 1036 ERNVVAYAEGQPRKLEKALVLKDAISDLPHVSNDEDREKLPYESLPKTDFQRYIRSTKRD 1095
Query: 636 VVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWD 695
+ + R LL+DHRPF +N DDY RVC IPKRKGANFRDLPG++V +N V D
Sbjct: 1096 LTGSAIDNCNKRTMLLHDHRPFHINEDDYARVCQIPKRKGANFRDLPGLIV-RNNTVCRD 1154
Query: 696 PSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQD 755
PSME V+L SGKPLVP Y F+ S +PF RLWWDE V TV+T H++ LLHP QD
Sbjct: 1155 PSMEPVILPSGKPLVPGYVFTFQQGKSKRPFARLWWDETVPTVLTVPTCHSQALLHPEQD 1214
Query: 756 RVLTIRENARLQGFPDCYQLFGPVKER 782
RVLTIRE+ARLQGFPD +Q G +KER
Sbjct: 1215 RVLTIRESARLQGFPDYFQFCGTIKER 1241
>gi|224071435|ref|XP_002303458.1| DNA methyltransferase [Populus trichocarpa]
gi|222840890|gb|EEE78437.1| DNA methyltransferase [Populus trichocarpa]
Length = 729
Score = 739 bits (1907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/697 (52%), Positives = 487/697 (69%), Gaps = 21/697 (3%)
Query: 94 NEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKAR 153
+E++ V CHYTQA+++G + NLGD YVK E GA ++I I+E F++ D E YF+ +
Sbjct: 6 DEDKVVWNVECHYTQANIEGRIINLGDCVYVKGE-GAKNHIGSILEFFKTTDREDYFRVQ 64
Query: 154 WFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPP 213
WFYRAEDTV+K+ A D KR+F S V +DNP++CI+SK + +++ + L K + P
Sbjct: 65 WFYRAEDTVMKEAADFHDNKRLFYSTVMNDNPIDCIISKVTVVQISPRVHL--KFHSTPA 122
Query: 214 CDLYYDMKYTLPHLTFLNINNESNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCGA 273
D Y+DM+Y + + TF + N + + IS E S + +++LLDL+SGCG
Sbjct: 123 SDFYFDMEYCVDYSTFRTLLTGKNLNSTPGTDDISMENMSTCGSYKAKLTLLDLFSGCGG 182
Query: 274 MSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLC 333
MSTGLC+GA +S V LVTRWA+D + AC+SLK NHPET VRNEAA+DFL LLKEW KLC
Sbjct: 183 MSTGLCLGAKVSCVDLVTRWALDSDESACQSLKLNHPETHVRNEAAEDFLELLKEWQKLC 242
Query: 334 QYFSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKT 393
+ +++ D + +S + S ++ + NDDD + + E+EV RL+ +CYG +K
Sbjct: 243 KRYAVNDVGRT-HKSRSMASSMSKQNKNSS--NDDD--IASGEYEVARLVDICYGKTDKR 297
Query: 394 KKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGP 453
K G+ FKV WKGY SED+WEPI+GLS C+ +++FV +G++S ILPLPGD D ICGGP
Sbjct: 298 GKRGLKFKVHWKGYSTSEDSWEPIEGLSNCEHSIRDFVREGFKSKILPLPGDADVICGGP 357
Query: 454 PCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARY 513
PCQG+SG+NR+RN + L D +N Q++VFMD++++LKPKYVLMENVVDIL+F ARY
Sbjct: 358 PCQGISGYNRYRNVDSPLADERNIQIVVFMDIVQFLKPKYVLMENVVDILRFDKASFARY 417
Query: 514 AVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP-------FKKLPQYPLPTHEIV 566
A+ RLV M YQ RLG +AAG YGLPQFRLRVFLWGA P KLPQ+PLP+H+++
Sbjct: 418 ALSRLVHMKYQARLGTVAAGCYGLPQFRLRVFLWGAHPKEASFIIHGKLPQFPLPSHDVI 477
Query: 567 ARGVIPNEFQEIIVAYANNQPC-QLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
R P EF+ VAY +QP LEK +L DAISDLP VT++E+ +E Y T+F
Sbjct: 478 VRYWPPPEFERNTVAYDEDQPRDDLEKATVLRDAISDLPDVTSHETREEMAYDKPPETDF 537
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
Q++IR R+ NLS +M +LLYDHRP+ + +D+ RVC IPK+KGANFRDLPGV+
Sbjct: 538 QQFIRSTRNG--NLSGTRMI---NLLYDHRPYSLTEEDFARVCQIPKKKGANFRDLPGVV 592
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPH 745
VG DN R DP+ E+++L SGKPLVPD+A+ FE S +P+ RLWWDE V+TVVT H
Sbjct: 593 VGADNVARRDPTEEQMLLPSGKPLVPDFALNFEGGKSRRPYARLWWDETVSTVVTFPDLH 652
Query: 746 NRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
++ ++HP QDRVLTIRE ARLQGFPD Y+ G VK+R
Sbjct: 653 SQAVMHPEQDRVLTIRECARLQGFPDYYRFCGTVKQR 689
>gi|116062018|dbj|BAF34637.1| chromomethylase [Brassica rapa]
Length = 805
Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/757 (48%), Positives = 503/757 (66%), Gaps = 47/757 (6%)
Query: 45 EVKEEPVELVTRVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALN---------- 94
EV EP+ + K + + + + P++ EA +P+RY+ +
Sbjct: 31 EVAAEPIRSRPKFKVELVVDSKKDPSWVLDEPIADSEARTTWPERYQVIQKKEVVPLPKK 90
Query: 95 ------EEEEVLQARCHYTQASVDGCL-YNLGDDAYVKAEEGAVDYIARIVELFESVDGE 147
EEEE+ AR H+ +A +D + YNL DDA+V++EE +I +I E+FE DG+
Sbjct: 91 KKKKYVEEEEIFLARRHFRRAILDDSITYNLNDDAHVQSEEDEKPFICKIAEIFEGCDGK 150
Query: 148 PYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAK 207
YF A+WFYRA DTVI+ ++D KRVF+SD++D N + +++K KI + + E
Sbjct: 151 MYFTAQWFYRACDTVIQKHEEMIDDKRVFISDIKDVNSMGVLLNKLKILMIPLTENTEVT 210
Query: 208 QKNIPPCDLYYDMKYTLPHLTFLNINNESNRRDSDASSTISSETGSNSPIGQPEMSLLDL 267
+ CD Y +MKY LP T + +S I+ P + + ++LDL
Sbjct: 211 ES----CDYYCNMKYRLPFSTLEALQ---------SSQCIT-------PNQRTDATMLDL 250
Query: 268 YSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLK 327
Y GCGAMSTGLC+GA LSG+KLVT+WA+D +A +S+K+NHPET VRNE+A+DFL LLK
Sbjct: 251 YCGCGAMSTGLCMGAQLSGLKLVTKWAVDTCEYAVQSIKYNHPETVVRNESAEDFLYLLK 310
Query: 328 EWAKLCQYFSIYDT-DKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVC 386
EW KLC +FS+ ++ D ++L MS EE ++ +E + D E FEVE+++ +
Sbjct: 311 EWEKLCIHFSLIESEDSEKYENLYGMSAAEEVKDGSDESDVKDGG---EVFEVEKIVGI- 366
Query: 387 YGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDV 446
K + ++ KVRW+ YGPS DTWEPI+ LS C++K+KEFV G++++ILPLPG V
Sbjct: 367 ----KKEEGGRLHLKVRWENYGPSHDTWEPIENLSNCRKKIKEFVVHGFKTSILPLPGGV 422
Query: 447 DFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFS 506
D +CGGPPCQG+SG+NRFRN + L+D KN QLL +M ++E+LKPKYVLMENVVD+L+F
Sbjct: 423 DVVCGGPPCQGISGYNRFRNEKEPLKDKKNEQLLEYMKIVEFLKPKYVLMENVVDMLRFV 482
Query: 507 GGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIV 566
GFLARYAVGRLV M+YQTR+G+MAAGSYGL QFR R FLWGA + LPQ+PLPTH+ V
Sbjct: 483 DGFLARYAVGRLVQMNYQTRMGMMAAGSYGLAQFRRRFFLWGAMSSETLPQFPLPTHDAV 542
Query: 567 ARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQ 626
RG +P F +VAY +L +LLSD ++DLP+V NNE E Y +T FQ
Sbjct: 543 NRGHVPVNFHSNVVAYEETDNVKLADKILLSDVLTDLPVVANNERRAEMPYDKDPKTPFQ 602
Query: 627 KYIRLRRHDVV-NLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
K+IRL + ++ + + S+ +LYDH P +N DDY+RVC IPK+K ANFRDLPGV
Sbjct: 603 KFIRLTQEGMLASPKDPKSNSKNEVLYDHHPLNLNKDDYQRVCRIPKKKQANFRDLPGVT 662
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPH 745
V +NKV WDP + R+ L+S PL+P+YAMKF S KPFGRLWWDE V TV+ RA+PH
Sbjct: 663 VNANNKVEWDPKIPRIYLESNHPLIPEYAMKFVEGKSKKPFGRLWWDETVPTVIGRAEPH 722
Query: 746 NRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
N +++HP+QDRVLT+RENARLQGFPD Y+LFGP K++
Sbjct: 723 NHVIIHPNQDRVLTVRENARLQGFPDYYRLFGPTKKK 759
>gi|226088552|dbj|BAH37021.1| chromomethylase OsMET2c [Oryza sativa Japonica Group]
Length = 749
Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/737 (50%), Positives = 480/737 (65%), Gaps = 39/737 (5%)
Query: 73 VSPPVSADEALKRYPDRYKA----------------LNEEEEVLQARCHYTQASVDGCLY 116
V V DEA K++P RY+ N + VL +CHY QA V +
Sbjct: 1 VGDAVPDDEARKQWPHRYEINDQIMKKDKRTSSQTFANAGKAVLDVKCHYLQAKVSRYTF 60
Query: 117 NLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVF 176
+G+ A+VK EG +YI R++E FE+ GE YF+ +WF+ AEDTVI + A D +R+F
Sbjct: 61 CIGECAFVKGPEGKPNYIGRLLEFFETKTGECYFRVQWFFTAEDTVIGEQAQSHDPRRLF 120
Query: 177 LSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNINNES 236
SD+ DDN L+CIVSK I +V ++D K K++P D YYDMKY++ + TF I E
Sbjct: 121 YSDLTDDNLLDCIVSKVTIVQVPPSVD--GKSKSVPSSDYYYDMKYSIDYSTFSTIEMED 178
Query: 237 N---------RRDSDASSTISSETGSNSPIGQP-EMSLLDLYSGCGAMSTGLCIGASLSG 286
R +D I SP+ + E+SLLDLY GCG MSTGLC+GA G
Sbjct: 179 TDDLMQSCYTSRINDKMKKIDVNKKHKSPVLEKMELSLLDLYCGCGGMSTGLCLGARGGG 238
Query: 287 VKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPE 346
V L RWAID + AC+S + NHPET+VRNE DDFL LLKEW KLC+ + + K
Sbjct: 239 VNLSARWAIDDDEIACESFRNNHPETRVRNETTDDFLELLKEWEKLCKTYVKHSRTKACV 298
Query: 347 QSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKG 406
S E E D + VP EEFEV +L+ +C+GDPNK K G+YFKVRWKG
Sbjct: 299 DSTT----------ESNNETPDCSTVPPEEFEVWKLVDICFGDPNKVSKHGLYFKVRWKG 348
Query: 407 YGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRN 466
YGP DTWEP++GL CKE +++FV +G+R ILP PGDVD +CGGPPCQG+SG+NR R
Sbjct: 349 YGPHHDTWEPVEGLRNCKEAIRDFVIEGHRQRILPRPGDVDVVCGGPPCQGISGYNRNRE 408
Query: 467 PQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTR 526
+A + KN+Q++VFMDV+++LKPKYV MENV+DILKF+ LARYA+ RLV+M YQ R
Sbjct: 409 FEAPFKCEKNKQIIVFMDVVQFLKPKYVYMENVLDILKFADATLARYALSRLVAMHYQAR 468
Query: 527 LGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQ 586
LGIMAAG YGLPQFR+RVFL G +KLP +PLPTHE + + P F+ +V + N+
Sbjct: 469 LGIMAAGCYGLPQFRMRVFLLGCHSKEKLPPFPLPTHEAIVKNGCPLAFERNLVGWPNDT 528
Query: 587 PCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVN-LSSAQMA 645
P QL + ++L D +SDLP V N ES DE Y +TEFQ+YIR +V +
Sbjct: 529 PMQLARPIVLEDILSDLPEVANGESRDEMLYVKGPQTEFQRYIRSFNVEVHGPRAHVTKD 588
Query: 646 SRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKS 705
S+ S LYDHRP ++ND+Y+R+ IPKRKGANFRDL GV+VGPDN R DP+ ERV+L S
Sbjct: 589 SKSSKLYDHRPLVLDNDNYQRILQIPKRKGANFRDLSGVIVGPDNVARLDPTKERVLLPS 648
Query: 706 GKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENAR 765
G+PLV D + +E+ S +PFGR+WWDE+V TV+T + L+HP+QDR+LTIRE+AR
Sbjct: 649 GRPLVLDCILAYENGKSLRPFGRVWWDEVVGTVLTVPNARMQALIHPAQDRLLTIRESAR 708
Query: 766 LQGFPDCYQLFGPVKER 782
LQGFPD Y+ G VK+R
Sbjct: 709 LQGFPDNYRFRGTVKDR 725
>gi|297804242|ref|XP_002870005.1| chromomethylase 2 [Arabidopsis lyrata subsp. lyrata]
gi|297315841|gb|EFH46264.1| chromomethylase 2 [Arabidopsis lyrata subsp. lyrata]
Length = 1253
Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/747 (49%), Positives = 498/747 (66%), Gaps = 30/747 (4%)
Query: 54 VTRVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRY-------KALNEEEE------VL 100
VTR + Q + S FF+ P+S +EA +R+ RY K+ ++ E V
Sbjct: 465 VTRTAVQEQNKR--SICFFIGEPISCEEAQERWRWRYDLKERKSKSRGQQSEDDEDKIVA 522
Query: 101 QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAED 160
CHY QA VDG ++LGD A +K EE ++ +I+E F++ D E YF+ +WFYRA D
Sbjct: 523 NVECHYLQAKVDGHTFSLGDFACIKGEEEET-HVGKILEFFKTTDEESYFRVQWFYRATD 581
Query: 161 TVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDM 220
TV+K A D+KR+F S V +DNP++C++SK + +V+ L+ N D Y+DM
Sbjct: 582 TVMKQQATNHDKKRLFYSTVMNDNPVDCLISKVTVLQVSPMAGLKP---NSIKSDYYFDM 638
Query: 221 KYTLPHLTFLNINNESNRRD-----SDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMS 275
+Y + + TF + N + + +D T S+E+ I E+ +LDLYSGCG MS
Sbjct: 639 EYCVEYSTFQTLKNPKSSENKLECCADVVPTESTESILKKKIFSGELPVLDLYSGCGGMS 698
Query: 276 TGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQY 335
TGL +GA +SGV +VT+WA+D N AC+SLK NHP T+VRN+AA DFL LLKEW KLC+
Sbjct: 699 TGLSLGAKISGVDVVTKWAVDQNMAACESLKLNHPNTQVRNDAAGDFLQLLKEWDKLCKR 758
Query: 336 FSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKK 395
+ +++ D Q + + +E E + D + +EE+EVE+L+ +C+GDP+KT K
Sbjct: 759 Y-VFNND----QRTDTLRSVNSIKETSESSSSRDDDSDSEEYEVEKLVDICFGDPDKTGK 813
Query: 396 PGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPC 455
G+ FKV WKGY EDTWE + LS C++ ++EFVT G++S ILPLPG V ICGGPPC
Sbjct: 814 NGLKFKVHWKGYRSDEDTWELAEELSNCQDAIREFVTSGFKSKILPLPGCVGVICGGPPC 873
Query: 456 QGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAV 515
QG+SG+NR+RN + L D +N+Q++VFMD++EYLKP YVLMENVVDIL+ G L RYA+
Sbjct: 874 QGISGYNRYRNVDSPLNDERNQQIIVFMDIVEYLKPSYVLMENVVDILRLDKGSLGRYAL 933
Query: 516 GRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEF 575
RLV+M YQ RLGIM AG YGL QFR RVF+WGA P K LP +PLPTH+++ R +P EF
Sbjct: 934 SRLVNMRYQARLGIMTAGCYGLSQFRSRVFMWGAVPNKNLPPFPLPTHDVIVRYGLPLEF 993
Query: 576 QEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHD 635
+ +VAY QP +LEK ++L DAISDLP V+N+E ++ Y + T+FQ+YIR + D
Sbjct: 994 ERNVVAYVEGQPRKLEKALVLKDAISDLPHVSNDEDREKLPYESPPETDFQRYIRSTKRD 1053
Query: 636 VVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWD 695
+ ++ R LL+DHRPF +N DDY RVC IPKRKGANFRDLPG++V +N V D
Sbjct: 1054 LTGSATDNSNKRKMLLHDHRPFHINEDDYARVCQIPKRKGANFRDLPGLIV-RNNTVCRD 1112
Query: 696 PSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQD 755
PSME V+L SGKPLVP Y F+ S +PF RLWWDE V TV+T H++ LLHP QD
Sbjct: 1113 PSMEPVILPSGKPLVPGYVFNFQQGKSKRPFARLWWDETVPTVLTVPTCHSQALLHPEQD 1172
Query: 756 RVLTIRENARLQGFPDCYQLFGPVKER 782
R+LTIRE+ARLQGFPD +Q G +KER
Sbjct: 1173 RMLTIRESARLQGFPDYFQFCGTIKER 1199
>gi|296088422|emb|CBI37413.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/666 (53%), Positives = 459/666 (68%), Gaps = 19/666 (2%)
Query: 128 EGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLN 187
EG ++ RI+E F++ +GE YF+ +WFYRAEDTV+K+ A D+KR+F S + +DN L+
Sbjct: 27 EGEQKHVGRILEFFKTTEGEDYFRVQWFYRAEDTVMKEEAASHDKKRIFCSTIMNDNSLD 86
Query: 188 CIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNI----------NNESN 237
CI+SK + E+ + L K +IPP D YYDMKY + + TF + N
Sbjct: 87 CIISKVNVLELTPRVSL--KLDSIPPFDYYYDMKYNVEYSTFHTLLSVKGYDLVSPNCIE 144
Query: 238 RRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDI 297
S A++T + P + E++LLDLYSGCG MSTGLC+GA LS V LVT+WA+D
Sbjct: 145 TPLSVANTTFPEDMDGCKP-DKAELALLDLYSGCGGMSTGLCLGAKLSCVNLVTKWALDF 203
Query: 298 NPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEEEE 357
+ AC+SLK NHPET+VRNE A+DFL LLKEW LC+ +++ ++ + N +
Sbjct: 204 DKSACESLKLNHPETQVRNETAEDFLDLLKEWEMLCEQYALNLVERKSQSRSNVL----- 258
Query: 358 EEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPI 417
+ + D V +E E+ +L+ +CYGDP++T K G+ FKVRWKGYGPSEDTWEPI
Sbjct: 259 RTSKSNINSPHDIKVATDELEILKLVDICYGDPSETGKRGLKFKVRWKGYGPSEDTWEPI 318
Query: 418 KGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNR 477
+GLS C+E + +FV G +S ILP PGDVD ICGGPPCQG+SG+NRFRN + L D +N
Sbjct: 319 EGLSNCQEGIYDFVRNGLKSKILPRPGDVDVICGGPPCQGISGYNRFRNVDSPLSDERNH 378
Query: 478 QLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGL 537
Q+++FMD++++LKPKYVLMENVVD+LK L RYA+ RLV M YQ RLG++AAG YGL
Sbjct: 379 QIVIFMDIVKFLKPKYVLMENVVDLLKLDKASLGRYAISRLVHMKYQARLGMIAAGCYGL 438
Query: 538 PQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLS 597
PQFRLRVFLWGA P + LPQ+PLPTH++VA+ P+EF+ IVAY QP +LEK V+L
Sbjct: 439 PQFRLRVFLWGAHPGESLPQFPLPTHDVVAKYWPPSEFECNIVAYDEGQPRELEKAVVLR 498
Query: 598 DAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMA-SRPSLLYDHRP 656
DAISDLP VTN E+ DE YG TEFQKYIR + + SS+ + S+LYDHRP
Sbjct: 499 DAISDLPAVTNYETRDEMLYGKPPETEFQKYIRSTKDAMAGSSSSGITKGYNSILYDHRP 558
Query: 657 FQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMK 716
+ +N D+Y R+C IP+RKGANFRDL GV+VG DN DP+M+ ++L SG PLVPD
Sbjct: 559 YPLNEDNYLRICQIPRRKGANFRDLSGVIVGTDNVAVRDPTMKPILLPSGHPLVPDCVFS 618
Query: 717 FEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLF 776
+E S +PF RLWWDE V TV+T N+ +LHP QDRVLTIRE ARLQGFPD Y+
Sbjct: 619 YEQGKSKRPFARLWWDETVPTVLTFPYLRNQAILHPEQDRVLTIRECARLQGFPDYYRFR 678
Query: 777 GPVKER 782
G VKER
Sbjct: 679 GTVKER 684
>gi|357120080|ref|XP_003561758.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like
[Brachypodium distachyon]
Length = 782
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/740 (50%), Positives = 489/740 (66%), Gaps = 40/740 (5%)
Query: 71 FFVSPPVSADEALKRYPDRYKA----------------LNEEEEVLQARCHYTQASVDGC 114
FFV V +EA +R+P RYK N +VL +CHY QASV G
Sbjct: 5 FFVGEAVLEEEAKQRWPHRYKKNHHFVEKDKRSGNQPFANAGNDVLDVKCHYLQASVSGS 64
Query: 115 LYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKR 174
+GD A+VK EG +YI+RI+E FE+V GE Y + +WF+RAEDTV++D A D +R
Sbjct: 65 TLCVGDCAFVKGPEGRPNYISRILEFFETVAGECYCRVQWFFRAEDTVMEDQAQSNDPRR 124
Query: 175 VFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNINN 234
+F SD++DD L+CIVSK I +V +D E+K +IP YYDMKY+L + TF +
Sbjct: 125 LFYSDLQDDYSLDCIVSKLTIVQVPPCVDKESK--SIPSSQYYYDMKYSLDYSTFSTLEM 182
Query: 235 ESNR---RDSDASST----ISSETGSNSPI-GQPEMSLLDLYSGCGAMSTGLCIGASLSG 286
E + S ASS + SP+ + ++SLLDLY GCG MSTGLC+GA +G
Sbjct: 183 EDTNAILQSSHASSIEMKKVDFSKKQKSPVPNKKDLSLLDLYCGCGGMSTGLCLGAHGAG 242
Query: 287 VKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPE 346
V LV +WA+D + AC+S + NHPET+VRNE +DFL LLKEW KLC+ K E
Sbjct: 243 VNLVKKWAVDDDLVACESYRLNHPETRVRNETTNDFLLLLKEWQKLCK--------KYVE 294
Query: 347 QSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKG 406
QS + + + E E DD+ P EE EV +L+ +C+GDPN + ++FKVRWKG
Sbjct: 295 QSE--VKDHADGLTETINEIPDDSVDPTEELEVWKLVDICFGDPNGIENHCLHFKVRWKG 352
Query: 407 YGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRN 466
YG ++DTWEPI GL C E +++FV +G++ ILPLPGDVD +CGGPPCQG+SG+NR R
Sbjct: 353 YGRNDDTWEPIDGLGNCNEAIRDFVIEGHKRKILPLPGDVDVVCGGPPCQGISGYNRNRE 412
Query: 467 PQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTR 526
A + +N++++ FMDV+++LKPKYV MENV+DILKF+ LARYA+ RLV+M YQ +
Sbjct: 413 FDAQFKCEENKEIIFFMDVMQFLKPKYVYMENVLDILKFADATLARYALSRLVAMRYQAK 472
Query: 527 LGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQ 586
LGIMAAG YG+PQFR+RVFL G P +KLP +PLPTHE + + P F+ +V +++
Sbjct: 473 LGIMAAGCYGVPQFRMRVFLLGCHPEEKLPPFPLPTHEAIRKNGCPLAFERNLVGWSDGT 532
Query: 587 PCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSS--AQM 644
QL K ++L D +SDLP V N ES DE Y +TEFQ+YIR +V S A+
Sbjct: 533 TVQLAKPIVLEDILSDLPEVGNEESRDEMPYVKDPQTEFQRYIRAFNSEVRGPKSRAAKS 592
Query: 645 ASRPS--LLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVM 702
SR + LYDHRPF ++ND+Y RV IPK+KGANFRDLPGV+VGPDN + DP+ ER++
Sbjct: 593 KSRKAKPKLYDHRPFVLDNDNYLRVLQIPKKKGANFRDLPGVVVGPDNVAKLDPTKERIL 652
Query: 703 LKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRE 762
L SG PLV D +K+E S +PFGRLWWDE+V TVVT H + +HP+QDR+LTIRE
Sbjct: 653 LPSGNPLVLDCILKYEDGKSLRPFGRLWWDEVVGTVVTCPNAHTQAFIHPAQDRLLTIRE 712
Query: 763 NARLQGFPDCYQLFGPVKER 782
+ARLQGFPD Y+ G VKER
Sbjct: 713 SARLQGFPDSYRFHGEVKER 732
>gi|218196311|gb|EEC78738.1| hypothetical protein OsI_18945 [Oryza sativa Indica Group]
Length = 1325
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/749 (48%), Positives = 477/749 (63%), Gaps = 45/749 (6%)
Query: 67 DSDLFFVSPPVSADEALKRYPDRYKA---LNEEEEVLQARCHYTQASVDGC---LYNLGD 120
D FFV V DEA K++P RY+ + ++++ ++ +V C +Y
Sbjct: 539 DGSCFFVGDAVPDDEARKQWPHRYEINDQIMKKDKRTSSQTFAKLVTVSFCGVFMYVYLQ 598
Query: 121 DAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDV 180
+ EG +YI R++E FE+ GE YF+ +WF+ AEDTVI + A D +R+F SD+
Sbjct: 599 MLDFRGPEGKPNYIGRLLEFFETKTGECYFRVQWFFTAEDTVIGEQAQSHDPRRLFYSDL 658
Query: 181 EDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNINNESN--- 237
DDN L+CIVSK I +V ++D K K++P D YYDMKY++ + TF I E
Sbjct: 659 TDDNLLDCIVSKVTIVQVPPSVD--GKSKSVPSSDYYYDMKYSIDYSTFSTIEMEDTDDL 716
Query: 238 ------RRDSDASSTISSETGSNSPIGQP-EMSLLDLYSGCGAMSTGLCIGASLSGVKLV 290
R +D I SP+ + E+SLLDLY GCG MSTGLC+GA GV L
Sbjct: 717 MQSCYTSRINDKMKKIDVNKKHKSPVLEKMELSLLDLYCGCGGMSTGLCLGARGGGVNLS 776
Query: 291 TRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLN 350
RWAID + AC+S + NHPET+VRNE DDFL LLKEW KLC+ + + K S
Sbjct: 777 ARWAIDDDEIACESFRNNHPETRVRNETTDDFLELLKEWEKLCKTYVKHSRTKACVDSTT 836
Query: 351 FMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPS 410
E E D + VP EEFEV +L+ +C+GDPNK K G+YFKVRWKGYGP
Sbjct: 837 ----------ESNNETPDCSTVPPEEFEVWKLVDICFGDPNKVSKHGLYFKVRWKGYGPH 886
Query: 411 EDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLP----------------GDVDFICGGPP 454
DTWEP++GL CKE +++FV +G+R ILP P GDVD +CGGPP
Sbjct: 887 HDTWEPVEGLRNCKEAIRDFVIEGHRQRILPRPRRNIAVFLLRPSKFPLGDVDVVCGGPP 946
Query: 455 CQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYA 514
CQG+SG+NR R +A + KN+Q++VFMDV+++LKPKYV MENV+DILKF+ LARYA
Sbjct: 947 CQGISGYNRNREFEAPFKCEKNKQIIVFMDVVQFLKPKYVYMENVLDILKFADATLARYA 1006
Query: 515 VGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNE 574
+ RLV+M YQ RLGIMAAG YGLPQFR+RVFL G +KLP +PLPTHE + + P
Sbjct: 1007 LSRLVAMHYQARLGIMAAGCYGLPQFRMRVFLLGCHSKEKLPPFPLPTHEAIVKNGCPLA 1066
Query: 575 FQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRH 634
F+ +V + N+ P QL + ++L D +SDLP V N ES DE Y +TEFQ+YIR
Sbjct: 1067 FERNLVGWPNDTPMQLARPIVLEDILSDLPEVANGESRDEMLYVKGPQTEFQRYIRSFNV 1126
Query: 635 DVVN-LSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVR 693
+V + S+ S LYDHRP ++ND+Y+R+ IPKRKGANFRDL GV+VGPDN R
Sbjct: 1127 EVHGPRAHVTKDSKSSKLYDHRPLVLDNDNYQRILQIPKRKGANFRDLSGVIVGPDNVAR 1186
Query: 694 WDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPS 753
DP+ ERV+L SG+PLV D + +E+ S +PFGR+WWDE+V TV+T + L+HP+
Sbjct: 1187 LDPTKERVLLPSGRPLVLDCILAYENGKSLRPFGRVWWDEVVGTVLTVPNARMQALIHPA 1246
Query: 754 QDRVLTIRENARLQGFPDCYQLFGPVKER 782
QDR+LTIRE+ARLQGFPD Y+ G VK+R
Sbjct: 1247 QDRLLTIRESARLQGFPDNYRFRGTVKDR 1275
>gi|297837287|ref|XP_002886525.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332366|gb|EFH62784.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 732
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/709 (51%), Positives = 476/709 (67%), Gaps = 56/709 (7%)
Query: 86 YPDRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVD 145
+P+ + +++ L+A HY +A V+G +Y+L DD YV+A+ G + IA+I+ELFE VD
Sbjct: 2 FPNSRRGSKKKKGNLEATSHYDKALVNGVVYSLNDDIYVQAK-GEPNRIAKIIELFEGVD 60
Query: 146 GEPYFKARWFYRAEDTVIKDLAC--LVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMD 203
GE YF+A+ FYRAEDTVI+DLA L +++RVFLS+VE D LN IVSK I ++ +
Sbjct: 61 GEGYFRAQLFYRAEDTVIQDLAGEYLQEKRRVFLSNVEADYSLNLIVSKVHIIKLPAKIL 120
Query: 204 LEAKQKNIPPCDLYYDMKYTLPHLTFLNINNESNRRDSDASSTISSETGSNSPIGQPEMS 263
LE ++++IP CD +YDM+Y L HLTF +++NE + + + S+ + S E
Sbjct: 121 LENEERDIPACDFFYDMRYNLEHLTFSSVDNEISNVEGNDSNNVGS--------CNKEKY 172
Query: 264 LLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN--EAADD 321
+LDLYSGCGAMSTGLC+GASLSGV L+T+WA+D N AC+SLK NHPETK R E A+
Sbjct: 173 MLDLYSGCGAMSTGLCMGASLSGVNLITKWAVDNNSFACESLKLNHPETKCRRIFEIAEG 232
Query: 322 FLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVER 381
+ + ++ + K L+ E++ E E E D + +EFEV+
Sbjct: 233 MEKAMPK---------VFTSPKTEPLELDSDFEDDNESENNVEGESDGYEMSPDEFEVDE 283
Query: 382 LIAVCYGDPNK-------TKKPGVYFKVRWKGY-GPSEDTWEPIKGLSKCKEKLKEFVTK 433
++++CYGDP K K +YFKV WKGY E+TWEP GL KCKEK+KEFVTK
Sbjct: 284 VLSICYGDPKKANASVKKVKPSALYFKVHWKGYDSEEENTWEPYDGLRKCKEKVKEFVTK 343
Query: 434 GYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKY 493
G++S +LPLPGDV +CGGPPCQG+SGFNRFRN L+D KN Q+ VFMD+I+YLKPKY
Sbjct: 344 GFKSKLLPLPGDVHIVCGGPPCQGLSGFNRFRNKDKPLQDEKNNQVTVFMDIIDYLKPKY 403
Query: 494 VLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFK 553
VLMENVV +L F+ GF+ RYAV RLV+ +YQ RLGIMAAG+YG+PQ R RVFLWGA+P +
Sbjct: 404 VLMENVVSLLGFAKGFVGRYAVARLVNKNYQARLGIMAAGAYGVPQCRYRVFLWGAQPSE 463
Query: 554 KLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
+L + N N QL+ + L DA SDLP VTN E +
Sbjct: 464 ELK--------------VGN----------NRSDLQLKTALTLGDATSDLPEVTNFEERE 499
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
Y TEFQK+I L R D + +S+ + S+ +LYDH+P Q+N DDY+R C I K+
Sbjct: 500 AINYDIEPETEFQKFISLPRADTL-ISNGEEESQLRILYDHQPLQMNKDDYQRACNISKK 558
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDE 733
KGA F DL GV V D VR DPS+ERV+L SGKP+VP+YA+ + S KPFGRLW+DE
Sbjct: 559 KGAYFTDLGGV-VFEDKTVRIDPSVERVILPSGKPMVPNYAITYRDGKSKKPFGRLWYDE 617
Query: 734 IVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
I+NTVVTRAQPHN+ +LHP Q+RVL+ RENARLQGFPDCY+L+GPV E+
Sbjct: 618 IINTVVTRAQPHNQCVLHPKQNRVLSARENARLQGFPDCYRLYGPVDEK 666
>gi|261414310|gb|ACX83573.1| DNA chromomethylase [Hieracium piloselloides]
Length = 607
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/557 (60%), Positives = 417/557 (74%), Gaps = 15/557 (2%)
Query: 235 ESNRRDSDASSTISSETGSNSPIGQ---------PEMSLLDLYSGCGAMSTGLCIGASLS 285
ES + + STISSE+G N + + EM +LDLYSGCGAMSTGLC+GA+++
Sbjct: 1 ESEGDGNGSDSTISSESGVNGAVNEESQSQNNKSSEMRMLDLYSGCGAMSTGLCLGANMA 60
Query: 286 GVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVP 345
V LVTRWA+D+N +AC+SLK NHPET+ RNE+A+DFL LLKEW KLCQ + +
Sbjct: 61 DVNLVTRWAVDLNKYACESLKLNHPETEARNESAEDFLQLLKEWEKLCQSYGLVGGGDSQ 120
Query: 346 EQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWK 405
++ EE EE+EEE DD E FEVE++++VCYGDP + KKPG+Y K+RWK
Sbjct: 121 QK------EEPATIEEDEEEEDDVEVDNEEIFEVEQILSVCYGDPKEMKKPGLYLKIRWK 174
Query: 406 GYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFR 465
GYG EDTWEPI+GLS C +K+KEFV G++S +LPLPGDVD I GGPPCQG+SGFNRFR
Sbjct: 175 GYGSEEDTWEPIEGLSDCHDKIKEFVVNGFKSKLLPLPGDVDVITGGPPCQGISGFNRFR 234
Query: 466 NPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQT 525
N LED KN+QL+V+MD++EYLKP++ LMENVVDI++F+ GFL RYA+GRLVSM+Y
Sbjct: 235 NKDKPLEDEKNKQLVVYMDIVEYLKPRFCLMENVVDIIRFAKGFLGRYALGRLVSMNYIA 294
Query: 526 RLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANN 585
R+G+M AGSYGLPQFR R+F+WGARP +KLPQYPLPTH +V RGV P EF+ V + +
Sbjct: 295 RVGLMVAGSYGLPQFRRRMFMWGARPSEKLPQYPLPTHNVVTRGVSPLEFESNTVVHDDG 354
Query: 586 QPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMA 645
+LEK + L DAISDLP V N+E+ DE YG +TEFQK+I L++ D+ +
Sbjct: 355 AKVELEKELYLGDAISDLPPVPNDEARDEMPYGEKPKTEFQKFISLKKTDMPGFVGSGQD 414
Query: 646 SRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKS 705
+ LLYDHRP ++N+DDY+RVC IPK+KGANFRDL GV V DN V WDP ++RV + S
Sbjct: 415 ASDHLLYDHRPLKLNDDDYQRVCQIPKKKGANFRDLKGVRVKADNHVEWDPDVDRVYIPS 474
Query: 706 GKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENAR 765
GKPLVPDYAM F S KPFGRLWWD+ V TVVTRA+PHN+ +LHP QDRVLTIRENAR
Sbjct: 475 GKPLVPDYAMTFVGGRSEKPFGRLWWDDTVPTVVTRAEPHNQAILHPLQDRVLTIRENAR 534
Query: 766 LQGFPDCYQLFGPVKER 782
LQGFPD Y+L GP+KER
Sbjct: 535 LQGFPDYYKLLGPIKER 551
>gi|242087283|ref|XP_002439474.1| hypothetical protein SORBIDRAFT_09g007390 [Sorghum bicolor]
gi|241944759|gb|EES17904.1| hypothetical protein SORBIDRAFT_09g007390 [Sorghum bicolor]
Length = 1441
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/847 (44%), Positives = 505/847 (59%), Gaps = 90/847 (10%)
Query: 3 RPVKRTSTQVAAEESNHSKARRRKLNLAEQQHQQQEEQREDEEVKEEPVELVTRVKK--- 59
+ V T +V A S KA++ ++ L + + + + E P+ VT +
Sbjct: 557 KAVHGTPLEVEAALSQPPKAKQPRICLGKCSLNLKSAENSSSSICELPMVTVTSAPEDKP 616
Query: 60 -KTQKNKP--------------DSDLFFVSPPVSADEALKRYPDRYK------------- 91
+NKP D FFV V +EA KR+P RY+
Sbjct: 617 ISAPENKPLDTHCTDSEMVDSMDGSYFFVGDAVPDEEAQKRWPHRYQNNHCLLKKDKRSN 676
Query: 92 ---ALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEP 148
N + VL +CHY +AS+ G +GD A++K EG YI R++E FE+ E
Sbjct: 677 TQTVSNVGKAVLDVKCHYLEASICGSTLCIGDCAFIKGLEGKPHYIGRLLEFFETTADEY 736
Query: 149 YFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQ 208
YF +WF+RAEDTV++D A D +R+F SD++DDN L+CIVSK I V+ + L K
Sbjct: 737 YFTVQWFFRAEDTVMEDQAQSHDPRRLFYSDLKDDNLLDCIVSKVTIMPVSPS--LNEKP 794
Query: 209 KNIPPCDLYYDMKYTLPHLTFL-------NINNESNRRDSDASSTISSETGSNSPIGQP- 260
+ IP YYDMKY+L + TF N S+ S+ I SP +
Sbjct: 795 RLIPSFHYYYDMKYSLDYSTFSTMEMGDPNDTLHSHYTSSNNVKRIDFTEKQKSPTSEMR 854
Query: 261 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAAD 320
E+SLLDLY GCG MSTGLC+GA GV LV RWA+D + AC++ + NHPET+VRNE D
Sbjct: 855 ELSLLDLYCGCGGMSTGLCLGARGGGVNLVARWAVDGDEVACETFRLNHPETRVRNETTD 914
Query: 321 DFLSLLKEWAKLCQYF-----SIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNE 375
DFL LLKEW KLC+ + + VP QS N D + E
Sbjct: 915 DFLELLKEWKKLCKTYVKPCSKVKSQSNVPTQSSN--------------GTPDCSTFSTE 960
Query: 376 EFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGY 435
EFEV +L+ +C+GDPN +K +YFKVRWKGYGP++DTWEP++GL CK+ +++FV +G+
Sbjct: 961 EFEVWKLVDICFGDPNGVRKRALYFKVRWKGYGPNDDTWEPMEGLKNCKDAIRDFVIEGH 1020
Query: 436 RSNILPLP--------------------GDVDFICGGPPCQGVSGFNRFRNPQAALEDIK 475
ILPLP GDVD ICGGPPCQG+SG+NR R A +
Sbjct: 1021 NKKILPLPAWPLPPLVGWMAACLGWLWLGDVDVICGGPPCQGISGYNRNREFDAPFNCER 1080
Query: 476 NRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSY 535
N+Q++VFMDV+++LKPKY+ MENV+DILKF+ LARYA+ RLVSM YQ +LG+MAAG Y
Sbjct: 1081 NKQIIVFMDVMQFLKPKYIYMENVLDILKFADATLARYALSRLVSMHYQAKLGVMAAGCY 1140
Query: 536 GLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVL 595
GLPQFR+RVFL KLP +PLPTHE + + P F+ +V + ++ P QLEK ++
Sbjct: 1141 GLPQFRMRVFL-------KLPPFPLPTHEAIVKNGCPLAFERNLVGWPDSMPMQLEKPIV 1193
Query: 596 LSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHR 655
L DA+SDLP V N E +E Y +TEFQ+YIR +V+ + + S L+DHR
Sbjct: 1194 LEDALSDLPEVENGEKREEMLYMKGPQTEFQRYIRSFNSEVLGSRAHVIKVSKSKLFDHR 1253
Query: 656 PFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAM 715
P ++ D+Y RV IPK+KGANFRDLPGV+VGPDN R DP+ ER++L SG PLV D +
Sbjct: 1254 PRALDVDNYLRVLQIPKKKGANFRDLPGVIVGPDNIARLDPTKERILLPSGNPLVVDCVL 1313
Query: 716 KFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
+++ S +P+GRLWWDE+V TV+T H + L+HP+QDR+LTIRE+ARLQGFPD ++
Sbjct: 1314 AYKNGKSLRPYGRLWWDEVVGTVLTCPNAHMQALIHPAQDRLLTIRESARLQGFPDSFRF 1373
Query: 776 FGPVKER 782
G VK+R
Sbjct: 1374 RGTVKDR 1380
>gi|302785127|ref|XP_002974335.1| hypothetical protein SELMODRAFT_30570 [Selaginella moellendorffii]
gi|300157933|gb|EFJ24557.1| hypothetical protein SELMODRAFT_30570 [Selaginella moellendorffii]
Length = 773
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/749 (47%), Positives = 473/749 (63%), Gaps = 53/749 (7%)
Query: 72 FVSPPVSADEALKRYPDRY---KALNEEEEVLQARC--HYTQASVDGCLYNLGDDAYVKA 126
FV P+ A A +++P+RY KA + +C HY +A VDG Y +GD ++
Sbjct: 1 FVGKPIPAARAKRQWPNRYDKVKAFKQSAGAGSQKCVEHYEEAVVDGKHYKVGDCVALEL 60
Query: 127 EEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACL----------------- 169
+ +Y+ +++E F++ + E +F+ +WF+R DTV L
Sbjct: 61 QGDDTEYLGKVLEFFKTANQENWFRVQWFFRFSDTVCLRLCVYPDCKCSLQAIGDLDDVH 120
Query: 170 VDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTF 229
+D KRVFLSD EDDN + CI+ K K++ A MD +K+K CD Y+DM YT TF
Sbjct: 121 LDNKRVFLSDDEDDNMIECIIKKVKVS-YAPVMDAFSKKKIKQNCDYYFDMGYTGDFSTF 179
Query: 230 LNI---NNESNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSG 286
+ N +ASS+ + S +PE+ LLDLY GCGAMSTGL +GA+L G
Sbjct: 180 YKVPSGNVFVFDALEEASSSFQTAVTRCSDTIKPELILLDLYCGCGAMSTGLSMGAALGG 239
Query: 287 VKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPE 346
VKLVT+WA+D N HAC S+K+NHPET+VRNE A+ FL LLKEW KLC + + V +
Sbjct: 240 VKLVTKWAVDYNEHACNSMKYNHPETEVRNEDAECFLLLLKEWQKLCTKYEGH----VAD 295
Query: 347 QSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPG--------- 397
+ N S + +E D E+EV++++ + K KKP
Sbjct: 296 DNSNASSPDSTTLGADEYAAD--------EYEVQQVVDIRMAGIQKPKKPDTSSKMPEKP 347
Query: 398 ----VYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGP 453
+ FKVRWKGY DTWEP+ L C+E++++FV +G R ILPLPGDVD +CGGP
Sbjct: 348 IKRRLEFKVRWKGYTSDHDTWEPVDHLDSCQERIRDFVLEGRRRRILPLPGDVDMVCGGP 407
Query: 454 PCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARY 513
PCQG SG+NRFRN +A L +NRQ+++FMD++ +L+PK+VLMENVVDILKF G L RY
Sbjct: 408 PCQGASGYNRFRNTEAPLTCPRNRQMVIFMDIVGFLRPKFVLMENVVDILKFQQGLLGRY 467
Query: 514 AVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPN 573
A+ RLV M YQ +LG+MAAGSYGLPQFR+RVFLWGA P + LP +PLPTH+ + +G +PN
Sbjct: 468 AMFRLVDMRYQAKLGMMAAGSYGLPQFRMRVFLWGAAPSEMLPAFPLPTHDAIYKGNVPN 527
Query: 574 EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRR 633
+F +V + + QLEK + L D+ISDLP V N E+ DE Y +TEFQK IR R
Sbjct: 528 QFSRNVVKHIGER--QLEKALFLGDSISDLPPVKNCETRDEIPYRDGPKTEFQKRIRSAR 585
Query: 634 HDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVR 693
D + S ++DHRP ++N+DDY+R C IPKRKGANFRDL G+ + DN V
Sbjct: 586 DDFAVFYGRGPRAMNSTVHDHRPLRLNDDDYQRACRIPKRKGANFRDLGGLKIKDDNSVT 645
Query: 694 WDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPS 753
D ++ER L SGKPL+PDYA+ F S KPF R+WWDE V TV+TRA+PHN +LHP+
Sbjct: 646 LDLTVEREYLPSGKPLIPDYAISFIKGRSLKPFARMWWDETVPTVITRAEPHNHRMLHPT 705
Query: 754 QDRVLTIRENARLQGFPDCYQLFGPVKER 782
QDRVLT+RENARLQGFPD Y+L G VKER
Sbjct: 706 QDRVLTVRENARLQGFPDWYKLTGSVKER 734
>gi|302818367|ref|XP_002990857.1| hypothetical protein SELMODRAFT_132507 [Selaginella moellendorffii]
gi|300141418|gb|EFJ08130.1| hypothetical protein SELMODRAFT_132507 [Selaginella moellendorffii]
Length = 933
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/748 (47%), Positives = 472/748 (63%), Gaps = 55/748 (7%)
Query: 72 FVSPPVSADEALKRYPDRYKALNEEEEVLQARC--HYTQASVDGCLYNLGDDAYVKAEEG 129
FV P+ A A +++P+RY ++ +C HY +A VDG Y +GD ++ +
Sbjct: 158 FVGKPIPAARAKRQWPNRY---DKSAGAGSQKCVEHYEEAVVDGKHYKVGDCVALELQGD 214
Query: 130 AVDYIARIVELFESVDGEPYFKARWFYRAEDTVI------KDLACLV-----------DR 172
+Y+ +++E F++ + E +F+ +WF+R DTV D C + D
Sbjct: 215 DAEYLGKVLEFFKTANQENWFRVQWFFRFSDTVCLRLCGYPDCKCSLQAIGDLDDVHLDN 274
Query: 173 KRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFL-- 230
KRVFLSD EDDN + CI+ K K++ A MD +K+K CD Y+DM YT TF
Sbjct: 275 KRVFLSDDEDDNMIECIIKKVKVS-YAPVMDAFSKKKIKQSCDYYFDMGYTGDFSTFYKV 333
Query: 231 ---NINNESNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGV 287
N+ S DASS+ + S +PE+ LLDLY GCGAMSTGL +GA+L GV
Sbjct: 334 PSGNVFVFSTDALEDASSSFQTAVTRCSDTIKPELILLDLYCGCGAMSTGLSMGAALGGV 393
Query: 288 KLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQ 347
LVT+WA+D N HAC S+K+NHPET+VRNE A+ FL LLKEW KLC + + V +
Sbjct: 394 NLVTKWAVDYNEHACNSMKYNHPETEVRNEDAECFLLLLKEWQKLCTKYEGH----VADD 449
Query: 348 SLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPG---------- 397
+ N S + +E D E+EV++++ + K KKP
Sbjct: 450 NSNASSPDSNTLGADEYAAD--------EYEVQQVVDIRMAGIQKPKKPDTSSKMPEKPI 501
Query: 398 ---VYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPP 454
+ FKVRWKGY DTWEP+ L C+E++++FV +G R ILPLPGDVD +CGGPP
Sbjct: 502 KRRLEFKVRWKGYTSDHDTWEPVDHLDSCQERIRDFVLEGRRRRILPLPGDVDMVCGGPP 561
Query: 455 CQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYA 514
CQG SG+NRFRN +A L +NRQ+++FMD++ +L+PK+VLMENVVDILKF G L RYA
Sbjct: 562 CQGASGYNRFRNTEAPLTCPRNRQMVIFMDIVGFLRPKFVLMENVVDILKFQQGLLGRYA 621
Query: 515 VGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNE 574
+ RLV M YQ +LG+MAAGSYGLPQFR+RVFLWGA P + LP +PLP+H+ + +G +PN+
Sbjct: 622 MFRLVDMRYQAKLGMMAAGSYGLPQFRMRVFLWGAAPSEMLPAFPLPSHDAIYKGNVPNQ 681
Query: 575 FQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRH 634
F +V + + QLEK + L D+ISDLP V N E+ DE Y +TEFQ IR R
Sbjct: 682 FSRNVVKHIGER--QLEKALFLGDSISDLPPVKNCETRDEIPYRDGPKTEFQTRIRSARD 739
Query: 635 DVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRW 694
D + S ++DHRP ++N+DDY+R C IPKRKGANFRDL G+ + DN V
Sbjct: 740 DFTVFYGRGPRAMNSTVHDHRPLRLNDDDYQRACRIPKRKGANFRDLGGLKIKDDNSVTL 799
Query: 695 DPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQ 754
D ++ER L SGKPL+PDYA+ F S KPF R+WWDE V TV+TRA+PHN +LHP+Q
Sbjct: 800 DLTVEREYLPSGKPLIPDYAISFIKGRSLKPFARMWWDETVPTVITRAEPHNHRMLHPTQ 859
Query: 755 DRVLTIRENARLQGFPDCYQLFGPVKER 782
DRVLT+RENARLQGFPD Y+L G VKER
Sbjct: 860 DRVLTVRENARLQGFPDWYKLTGSVKER 887
>gi|222630668|gb|EEE62800.1| hypothetical protein OsJ_17603 [Oryza sativa Japonica Group]
Length = 1190
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/791 (45%), Positives = 477/791 (60%), Gaps = 87/791 (10%)
Query: 67 DSDLFFVSPPVSADEALKRYPDRYKA---LNEEEEVLQARCHYTQASVDGC---LYNLGD 120
D FFV V DEA K++P RY+ + ++++ ++ +V C +Y
Sbjct: 362 DGSCFFVGDAVPDDEARKQWPHRYEINDQIMKKDKRTSSQTFAKLVTVSFCVVFMYVYLQ 421
Query: 121 DAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDV 180
+ EG +YI R++E FE+ GE YF+ +WF+ AEDTVI + A D +R+F SD+
Sbjct: 422 MLDFRGPEGKPNYIGRLLEFFETKTGECYFRVQWFFTAEDTVIGEQAQSHDPRRLFYSDL 481
Query: 181 EDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNINNESN--- 237
DDN L+CIVSK I +V ++D K K++P D YYDMKY++ + TF I E
Sbjct: 482 TDDNLLDCIVSKVTIVQVPPSVD--GKSKSVPSSDYYYDMKYSIDYSTFSTIEMEDTDDL 539
Query: 238 ------RRDSDASSTISSETGSNSPIGQP-EMSLLDLYSGCGAMSTGLCIGASLSGVKLV 290
R +D I SP+ + E+SLLDLY GCG MSTGLC+GA GV L
Sbjct: 540 MQSCYTSRINDKMKKIDVNKKHKSPVLEKMELSLLDLYCGCGGMSTGLCLGARGGGVNLS 599
Query: 291 TRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLN 350
RWAID + AC+S + NHPET+VRNE DDFL LLKEW KLC+ + + K S
Sbjct: 600 ARWAIDDDEIACESFRNNHPETRVRNETTDDFLELLKEWEKLCKTYVKHSRTKACVDSTT 659
Query: 351 FMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPS 410
E E D + VP EEFEV +L+ +C+GDPNK K G+YFKVRWKGYGP
Sbjct: 660 ----------ESNNETPDCSTVPPEEFEVWKLVDICFGDPNKVSKHGLYFKVRWKGYGPH 709
Query: 411 EDTWEPIKGLSKCKEKLKEFVTKGYRSNI------------------------------- 439
DTWEP++GL CKE +++FV +G+R I
Sbjct: 710 HDTWEPVEGLRNCKEAIRDFVIEGHRQRILPRPVRWKGYGPHHDTWEPVEGLRNCKEAIR 769
Query: 440 -----------LPLP----------------GDVDFICGGPPCQGVSGFNRFRNPQAALE 472
LP P GDVD +CGGPPCQG+SG+NR R +A +
Sbjct: 770 DFVIEGHRQRILPRPRRNIAVFLLRPSKFPLGDVDVVCGGPPCQGISGYNRNREFEAPFK 829
Query: 473 DIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAA 532
KN+Q++VFMDV+++LKPKYV MENV+DILKF+ LARYA+ RLV+M YQ RLGIMAA
Sbjct: 830 CEKNKQIIVFMDVVQFLKPKYVYMENVLDILKFADATLARYALSRLVAMHYQARLGIMAA 889
Query: 533 GSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEK 592
G YGLPQFR+RVFL G +KLP +PLPTHE + + P F+ +V + N+ P QL +
Sbjct: 890 GCYGLPQFRMRVFLLGCHSKEKLPPFPLPTHEAIVKNGCPLAFERNLVGWPNDTPMQLAR 949
Query: 593 GVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVN-LSSAQMASRPSLL 651
++L D +SDLP V N ES DE Y +TEFQ+YIR +V + S+ S L
Sbjct: 950 PIVLEDILSDLPEVANGESRDEMLYVKGPQTEFQRYIRSFNVEVHGPRAHVTKDSKSSKL 1009
Query: 652 YDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVP 711
YDHRP ++ND+Y+R+ IPKRKGANFRDL GV+VGPDN R DP+ ERV+L SG+PLV
Sbjct: 1010 YDHRPLVLDNDNYQRILQIPKRKGANFRDLSGVIVGPDNVARLDPTKERVLLPSGRPLVL 1069
Query: 712 DYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPD 771
D + +E+ S +PFGR+WWDE+V TV+T + L+HP+QDR+LTIRE+ARLQGFPD
Sbjct: 1070 DCILAYENGKSLRPFGRVWWDEVVGTVLTVPNARMQALIHPAQDRLLTIRESARLQGFPD 1129
Query: 772 CYQLFGPVKER 782
Y+ G VK+R
Sbjct: 1130 NYRFRGTVKDR 1140
>gi|242065598|ref|XP_002454088.1| hypothetical protein SORBIDRAFT_04g024430 [Sorghum bicolor]
gi|241933919|gb|EES07064.1| hypothetical protein SORBIDRAFT_04g024430 [Sorghum bicolor]
Length = 770
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/654 (53%), Positives = 443/654 (67%), Gaps = 36/654 (5%)
Query: 56 RVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALN-----EEEEVLQARCHYTQAS 110
RV +++ D + FV V A EA +P RY+ EE+E L+ARCHY A
Sbjct: 128 RVGRRSAAAGGDHEPEFVGNAVPAVEARSNWPKRYERSTAATKPEEDEELKARCHYRSAK 187
Query: 111 VDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAC-- 168
VD +Y LGDD YVKA E DYI RI E FE D YF WF+RAEDTVI L
Sbjct: 188 VDNVVYCLGDDVYVKAGENEADYIGRITEFFEGTDRCHYFTCHWFFRAEDTVINSLVSIN 247
Query: 169 ----LVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTL 224
+ D +RVFLS+ ++DN L+CI+SK KI V N+D +AK + I CDLYYDM Y++
Sbjct: 248 VDGHMHDPRRVFLSEEKNDNVLDCIISKVKIVRVDPNIDPKAKAQLIEHCDLYYDMSYSV 307
Query: 225 PHLTFLNINNESNRRDSDASSTISS-----ETGSNSPIGQPEMSLLDLYSGCGAMSTGLC 279
+ TF NI++E+ + S+ +S IS ET S+ P + +LLDLYSGCG MSTGLC
Sbjct: 308 AYSTFANISSENGQSGSETASGISDGDVDLETSSSMP--ERTATLLDLYSGCGGMSTGLC 365
Query: 280 IGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIY 339
+GA+LSG+KL TRWA+D+N AC+SLK+NHP+T+VRNE AD+FL+LLKEWA LC+ + +
Sbjct: 366 LGAALSGLKLETRWAVDLNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCEKY-VQ 424
Query: 340 DTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVY 399
D D N E++E+E + D EF VE+LI +CYG +K G+Y
Sbjct: 425 DIDS------NLAGSEDQEDEGSPLDKD--------EFVVEKLIGICYG--GSGRKNGIY 468
Query: 400 FKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVS 459
FKV+W+GYGP EDTWEPI LS C K++EFV +G+R ILPLPGDVD ICGGPPCQG+S
Sbjct: 469 FKVQWEGYGPEEDTWEPIDNLSDCPLKIREFVQEGHRRKILPLPGDVDVICGGPPCQGIS 528
Query: 460 GFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLV 519
GFNRFRN L+D KN+Q++ FMD++ YLKPKYVLMENVVDILKF+ G+L +YA+ LV
Sbjct: 529 GFNRFRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLV 588
Query: 520 SMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEII 579
+M YQ RLG+M AG YGLPQFR+RVFLWGA LP+YPLPT+++V RG PN F + I
Sbjct: 589 AMKYQARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCI 648
Query: 580 VAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNL 639
VAY + L+K +LL DAISDLP V N++ D +YG +TEFQ+YIRL R D+++
Sbjct: 649 VAYDETEKPSLKKALLLGDAISDLPKVENHQPNDVMEYGGSPKTEFQRYIRLGRKDMLDW 708
Query: 640 SSAQMAS-RPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKV 692
S + A L DH+P ++NNDDYERV IP +KGANFRDL GV VG +N V
Sbjct: 709 SFGEEAGPDEGKLLDHQPLRLNNDDYERVQQIPVKKGANFRDLKGVKVGANNIV 762
>gi|297842789|ref|XP_002889276.1| hypothetical protein ARALYDRAFT_895912 [Arabidopsis lyrata subsp.
lyrata]
gi|297335117|gb|EFH65535.1| hypothetical protein ARALYDRAFT_895912 [Arabidopsis lyrata subsp.
lyrata]
Length = 876
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/739 (46%), Positives = 478/739 (64%), Gaps = 88/739 (11%)
Query: 59 KKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKAL------------NEEEEVLQARCHY 106
K+ ++ +P+SDL F PVS E++ R+P RY + +++E++ A+ HY
Sbjct: 6 KQMKRAEPESDLCFAGKPVSVVESMIRWPHRYPSKKTKLEAATATKGDKKEKIKLAKRHY 65
Query: 107 TQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDL 166
QA VDG L NL DD YV G +++I +++E+FE+ DG PY + RWFYR DT+I+
Sbjct: 66 EQALVDGVLINLNDDVYVTGLPGKLNFIGKVIEMFEADDGVPYSRIRWFYRPNDTLIERF 125
Query: 167 ACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAT-NMDLEAKQKNIPPCDLYYDMKYTLP 225
A LV +KRVFLS+VEDDNPL CI SK IA+V + +Q+ IPPCD YYDMKY +P
Sbjct: 126 AELVQKKRVFLSNVEDDNPLTCIYSKVNIAKVPLPKITSRIEQRVIPPCDYYYDMKYEVP 185
Query: 226 HLTFLNINNESNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLS 285
+L F + ++++ + ++ + S + + + E LLDLYSGCGAMSTG C+GAS++
Sbjct: 186 YLNFTSADDDTA---ASSTLSSDSASNCFETLHKDEKYLLDLYSGCGAMSTGFCMGASIA 242
Query: 286 GVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVP 345
GVKL+T+W++DIN AC S + NHPET+VRNEAA+DFL LLKEW +LC+ FS+ + + P
Sbjct: 243 GVKLITKWSVDINKFACDSFRHNHPETEVRNEAAEDFLILLKEWKRLCERFSLSSSTE-P 301
Query: 346 EQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWK 405
+S++ + +EE +E ++ +E + EFEVE+ + + +GDP
Sbjct: 302 MESISELEDEESDENDDIDEASTGMELSAGEFEVEKFVGIVFGDP--------------- 346
Query: 406 GYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFR 465
KG L L G V +CGGPPCQG+SG+NRFR
Sbjct: 347 ---------------------------KGTGEKTLHLKGTVYSVCGGPPCQGISGYNRFR 379
Query: 466 NPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQT 525
N QA LED KN+QLLVF+D+I++LKP YVLMENVVD+L+FS G+LAR+AV V+M+YQT
Sbjct: 380 NKQAPLEDKKNQQLLVFLDIIDFLKPSYVLMENVVDLLRFSKGYLARHAVASFVAMNYQT 439
Query: 526 RLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANN 585
RLG+M AGSYGLPQ R RVFLW A+P + L G+I E
Sbjct: 440 RLGMMTAGSYGLPQVRNRVFLWAAQPTEDL-----------QVGLIQKEL---------- 478
Query: 586 QPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVA-RTEFQKYIRLRRHD-VVNLSSAQ 643
QL+ + L+DAISDLP VTN+E+ D R Y A +T+F+ +I L+R + ++ +
Sbjct: 479 --LQLDNALTLADAISDLPPVTNSEANDVRNYNDAAPKTDFENFISLKRSETLLPVCGGD 536
Query: 644 MASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVML 703
A R L+DH+P ++ +DD ER+ IPK+KGANFRD+PGVLV +NK + + ++R L
Sbjct: 537 PARR---LFDHQPLELRDDDLERISYIPKKKGANFRDMPGVLVH-NNKAQLNLRVKRAKL 592
Query: 704 KSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIREN 763
KSGK +VP YA+ F S KPFGRLWWDEIVNTVVTRA+PHN+ ++HP Q+RVL++REN
Sbjct: 593 KSGKNVVPAYAVSFIKGKSKKPFGRLWWDEIVNTVVTRAEPHNQCVIHPMQERVLSVREN 652
Query: 764 ARLQGFPDCYQLFGPVKER 782
ARLQGFPDCY+L G +KE+
Sbjct: 653 ARLQGFPDCYKLCGSIKEK 671
>gi|18542936|gb|AAL75761.1| Putative DNA cytosine methyltransferase MET2a [Oryza sativa
Japonica Group]
Length = 719
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/658 (51%), Positives = 426/658 (64%), Gaps = 71/658 (10%)
Query: 67 DSDLFFVSPPVSADEALKRYPDRYKA-----LNEEEEVLQARCHYTQASVDGCLYNLGDD 121
D D FV P A EA ++P RY+ +EEE ++ARCHY+ A VDG LY L DD
Sbjct: 120 DHDPEFVGDPFPAKEARDKWPQRYQRNAATRRPDEEEDIKARCHYSSAKVDGTLYCLHDD 179
Query: 122 AYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAC------LVDRKRV 175
YVKAEE DYI RI E FE D YF RWF+RAEDTVI + D KRV
Sbjct: 180 VYVKAEEDKADYIGRITEFFEGTDHCHYFTCRWFFRAEDTVISSIMMENADDEKHDLKRV 239
Query: 176 FLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNINNE 235
FLS+ ++DN L+CI+SK KI + NM+ EAK + + CDLYYDM YT+ + TF NI
Sbjct: 240 FLSEEKNDNVLDCIISKVKIVYIDPNMESEAKARRLADCDLYYDMSYTVAYSTFANIPLG 299
Query: 236 SNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAI 295
DS+ASS +G+ +LLDLYSGCG MSTGLC+GA+L+G+ L TRWA+
Sbjct: 300 KVVSDSEASS-----------VGK--ATLLDLYSGCGGMSTGLCLGAALAGLNLETRWAV 346
Query: 296 DINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEE 355
D N AC+SLK+NHP T+VRNE AD+FL+LLK W LC D+ ++ ++F S
Sbjct: 347 DFNSFACESLKYNHPRTEVRNEKADEFLALLKGWHSLC--------DEYVKKDIDFSSAG 398
Query: 356 EEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWE 415
E EE DDD + +EF VE+L +CYG ++ G+YFKV+WKGYG EDTWE
Sbjct: 399 ASENEE-----DDDEPLEKDEFVVEKLAGICYG--GSGREDGLYFKVQWKGYGREEDTWE 451
Query: 416 PIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIK 475
PI+ L C K+KEFV +GYR ILPLPGDVD ICGGPPCQG+SGFNRFRN + L+D K
Sbjct: 452 PIENLRDCPLKIKEFVQEGYRRKILPLPGDVDVICGGPPCQGISGFNRFRNRKEPLKDEK 511
Query: 476 NRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSY 535
N+Q++ FMD++ YLKPKYVLMENVVDILKF+ G+L RYA+ RLV+M YQ RLG+M AG Y
Sbjct: 512 NKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGRYALSRLVAMKYQARLGMMVAGCY 571
Query: 536 GLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVL 595
GLPQFR+RVFLWGA P LP+YPLPTH +V RG PN F
Sbjct: 572 GLPQFRMRVFLWGALPTMVLPKYPLPTHNVVVRGGAPNAFS------------------- 612
Query: 596 LSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSL--LYD 653
V N++ + +YG+ +TEFQ+YIRL R ++++ SS + P L L D
Sbjct: 613 ----------VNNHQPNEVMEYGSSPKTEFQRYIRLSRKEMLD-SSFEGKDGPDLGKLLD 661
Query: 654 HRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVP 711
H+P ++N DD+ERV IP +KGANFRDL GV VG +N V WDP + RV L SGKPL P
Sbjct: 662 HQPLKLNKDDHERVQQIPVKKGANFRDLKGVRVGANNIVEWDPDVPRVYLSSGKPLAP 719
>gi|14583094|gb|AAK69757.1|AF383171_1 chromomethylase CMT2 [Arabidopsis thaliana]
Length = 1244
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/621 (51%), Positives = 427/621 (68%), Gaps = 18/621 (2%)
Query: 171 DRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFL 230
D++R+F S V +DNP++C++SK + +V+ L+ N D Y+DM+Y + + TF
Sbjct: 579 DKRRLFYSTVMNDNPVDCLISKVTVLQVSPRAGLKP---NSIKSDYYFDMEYCVEYSTFQ 635
Query: 231 NINNES-------NRRD--SDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIG 281
+ N N+ + +D T S+E+ E+ +LDLYSGCG MSTGL +G
Sbjct: 636 TLRNRKCSSKTSENKLECWADVVPTESTESILKKKSFSGELPVLDLYSGCGGMSTGLSLG 695
Query: 282 ASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDT 341
A +SGV +VT+WA+D N ACKSLK NHP T+VRN+AA DFL LLKEW KLC+ + +++
Sbjct: 696 AKISGVDVVTKWAVDQNTAACKSLKLNHPNTQVRNDAAGDFLQLLKEWDKLCKRY-VFNN 754
Query: 342 DKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFK 401
D Q + + +E E + D + +EE+EVE+L+ +C+GDP+KT K G+ FK
Sbjct: 755 D----QRTDTLRSVNSTKETSESSSSSDDDSDSEEYEVEKLVDICFGDPDKTGKNGLKFK 810
Query: 402 VRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGF 461
V WKGY EDTWE + LS C++ ++EFVT G++S ILPLPG V ICGGPPCQG+SG+
Sbjct: 811 VHWKGYRSDEDTWELAEELSNCQDAIREFVTSGFKSKILPLPGRVGVICGGPPCQGISGY 870
Query: 462 NRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSM 521
NR RN + L D +N+Q++VFMD++EYLKP YVLMENVVDIL+ G L RYA+ RLV+M
Sbjct: 871 NRHRNVDSPLNDERNQQIIVFMDIVEYLKPSYVLMENVVDILRMDKGSLGRYALSRLVNM 930
Query: 522 DYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVA 581
YQ RLGIM AG YGL QFR RVF+WGA P K LP +PLPTH+++ R +P EF+ +VA
Sbjct: 931 RYQARLGIMTAGCYGLSQFRSRVFMWGAVPNKNLPPFPLPTHDVIVRYGLPLEFERNVVA 990
Query: 582 YANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSS 641
YA QP +LEK ++L DAISDLP V+N+E ++ Y ++ +T+FQ+YIR + D+ +
Sbjct: 991 YAEGQPRKLEKALVLKDAISDLPHVSNDEDREKLPYESLPKTDFQRYIRSTKRDLTGSAI 1050
Query: 642 AQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERV 701
R LL+DHRPF +N DDY RVC IP RKGANFRDLPG++V +N V DPSME V
Sbjct: 1051 DNCNKRTMLLHDHRPFHINEDDYARVCQIPNRKGANFRDLPGIIV-RNNTVCRDPSMEPV 1109
Query: 702 MLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIR 761
+L SGKPLVP Y F+ S +PF RLWWDE V TV+T H++ LLHP QDRVLTIR
Sbjct: 1110 ILPSGKPLVPGYVFTFQQGKSKRPFARLWWDETVPTVLTVPTCHSQALLHPEQDRVLTIR 1169
Query: 762 ENARLQGFPDCYQLFGPVKER 782
E+ARLQGFPD +Q G +KER
Sbjct: 1170 ESARLQGFPDYFQFCGTIKER 1190
>gi|168034417|ref|XP_001769709.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679058|gb|EDQ65510.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 700
Score = 638 bits (1646), Expect = e-180, Method: Compositional matrix adjust.
Identities = 331/681 (48%), Positives = 448/681 (65%), Gaps = 33/681 (4%)
Query: 105 HYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVI 163
HY QA V+G LY LGD +V + G D +I RI E +E D P+F A+WF+R+ DTV
Sbjct: 1 HYRQAEVEGKLYKLGDCVHVHS--GLEDPFIGRITEFYEKEDKSPWFHAQWFFRSYDTVS 58
Query: 164 KDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYT 223
++ D K+++ S+V D+N L+ IV K + +A+ + P CD Y+D Y
Sbjct: 59 RNH----DPKKIYYSEVADENELHVIVGKVSVIRIASKDRSDRSPIKTPACDYYFDKGYM 114
Query: 224 LPHLTFLNINNESNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGAS 283
+ TF + + S ++ + +S + SN + + LLDLY GCGAMSTG+C+G +
Sbjct: 115 FQYGTFYTLPKDLPGHGSKSTESDNSCSDSND---KKDFYLLDLYCGCGAMSTGICLGMN 171
Query: 284 LSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDK 343
L+G+ LVT+WA+D+N AC SLK+NHPET VRNEAA+D+L LLKEW KLC+ + +
Sbjct: 172 LAGINLVTKWAVDLNEFACMSLKYNHPETTVRNEAAEDYLQLLKEWKKLCEKYPVGCV-- 229
Query: 344 VPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVR 403
+E+ EE+ D D + E+EVERL+ + + K V +VR
Sbjct: 230 --------------VQEDSEEDEDGDDDPAAGEYEVERLLGIRWVGEVSEKDKEVMEQVR 275
Query: 404 WKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNR 463
WKGY P +DTWEP L C E++KEFV +G R +LPLPGD D ICGGPPCQG SGFNR
Sbjct: 276 WKGYAPEDDTWEPAASLDHCPERVKEFVLEGRRQKLLPLPGDCDVICGGPPCQGASGFNR 335
Query: 464 FRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDY 523
FRN L D +N+Q++V+MD++++L+P++ +MENVVDILKF G L RYA+ R V M+Y
Sbjct: 336 FRNRVDPLADPRNKQMVVYMDIVDFLRPRFFIMENVVDILKFCDGILGRYALARAVGMNY 395
Query: 524 QTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAY- 582
Q+++GIM AG YG+PQFR R FLWGA + LP YP+PTH+++ RG P +++ +VAY
Sbjct: 396 QSKVGIMVAGCYGMPQFRARCFLWGAASDEILPPYPMPTHKVIVRGGFPQKWERCLVAYE 455
Query: 583 ANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSA 642
N QP L+ ++L DA+SDLP V N++S+D+ Y + +FQ ++RL + S
Sbjct: 456 ENKQPEWLQLPLVLKDALSDLPAVGNDQSKDDISYDEEPQCDFQHFLRLPKKG----SLG 511
Query: 643 QMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSME-RV 701
+ ++L DHRP +N DDYERV IPK+KGANFRDL G+++ D V D E R
Sbjct: 512 PQQKKKAILPDHRPLCLNADDYERVKQIPKKKGANFRDLKGIIIKADG-VTVDVVREPRE 570
Query: 702 MLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIR 761
+LKSGKPLVPDYA+ F S KPFGRLWWDE V TVVTRA+PHN+I+LHP QDRVLTIR
Sbjct: 571 LLKSGKPLVPDYAISFIRGRSFKPFGRLWWDETVPTVVTRAEPHNQIILHPEQDRVLTIR 630
Query: 762 ENARLQGFPDCYQLFGPVKER 782
ENARLQGF D Y+LFGP+K+R
Sbjct: 631 ENARLQGFSDYYKLFGPIKQR 651
>gi|213498014|emb|CAS84142.1| chromomethylase [Nicotiana tomentosiformis]
Length = 500
Score = 637 bits (1642), Expect = e-179, Method: Compositional matrix adjust.
Identities = 308/512 (60%), Positives = 385/512 (75%), Gaps = 19/512 (3%)
Query: 276 TGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQY 335
TGLC+GA + GVKLVT+WA+D+N +AC SLK+NHPET VRNE+ADDFL LL+EW +LC
Sbjct: 1 TGLCLGADIGGVKLVTKWAVDLNQYACDSLKWNHPETAVRNESADDFLLLLREWRQLCAS 60
Query: 336 FSIYDTDKVPEQSL-----NFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDP 390
S+ + P S ++ + E+E+E DD+ E FEVE+L+ +CYGDP
Sbjct: 61 CSLL-RNNTPTHSFLKVRDEDDKDDNDNEDEDEGSGDDEQG---EIFEVEQLLEICYGDP 116
Query: 391 NKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFIC 450
+ KPG+YFKVRWKGYG EDTWEPI+GL C+EK+K+FV KG++++ILPLPG+V IC
Sbjct: 117 KEKNKPGLYFKVRWKGYGQEEDTWEPIEGLDGCQEKIKDFVAKGFKASILPLPGEVQVIC 176
Query: 451 GGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFL 510
GGPPCQGVSGFNRFRN L D KN+QL FMD++E+L P++VLMENVVD++KF+ GFL
Sbjct: 177 GGPPCQGVSGFNRFRNSTNPLGDSKNKQLETFMDIVEFLNPQFVLMENVVDLVKFADGFL 236
Query: 511 ARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGV 570
RYA+GRLV M+YQ R+G+M AG+YGLPQFR RVF+WGA P +KLPQYPLPTH +V RG
Sbjct: 237 GRYALGRLVGMNYQARMGMMVAGAYGLPQFRRRVFMWGALPSEKLPQYPLPTHNVVVRGG 296
Query: 571 IPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIR 630
+P EF+ +VAY +L++ + L DAISDLP V N+E DE Y ++ FQ +IR
Sbjct: 297 MPKEFELNVVAYDEALKVELKRELFLKDAISDLPPVENDEPTDEMPYIDEPKSAFQHFIR 356
Query: 631 LRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDN 690
RR+ + S+LYDHRP ++N DDY+RVC IPKRKGANFRDLPGV V +N
Sbjct: 357 SRRNGTLG----------SVLYDHRPLRLNEDDYQRVCQIPKRKGANFRDLPGVRVRANN 406
Query: 691 KVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILL 750
V DP +ERV + SGKPLVPDYA+ F +STKPFGRLWWDEIV TVVTRA+PHN+++L
Sbjct: 407 TVELDPDVERVKVASGKPLVPDYAITFVRGTSTKPFGRLWWDEIVPTVVTRAEPHNQVIL 466
Query: 751 HPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
HP QDRVLTIRENARLQGFPD Y+L GP+KER
Sbjct: 467 HPEQDRVLTIRENARLQGFPDYYKLTGPIKER 498
>gi|359490000|ref|XP_002274960.2| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Vitis
vinifera]
Length = 1298
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 301/527 (57%), Positives = 385/527 (73%), Gaps = 13/527 (2%)
Query: 259 QPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEA 318
+PE++LLD+YSGCG MSTGLC+GA LSGV LVTRWA+DIN AC+SLK NHPET++RNE+
Sbjct: 726 KPELALLDIYSGCGGMSTGLCLGAKLSGVDLVTRWALDINKSACESLKLNHPETQIRNES 785
Query: 319 ADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFE 378
A+DFL LLKEW KLC+ + + D ++SL S + + + P+ EFE
Sbjct: 786 AEDFLDLLKEWDKLCKRYVVKDV----QESLKVNSRVLRAAKVNSKTGNKS---PSGEFE 838
Query: 379 VERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSN 438
V LI +CYGDP + K G+ F+ RW G+GPSEDTWEPI+GLSKC++ +++FV KG+++
Sbjct: 839 VASLIDICYGDPTNSGKHGLKFQARWAGHGPSEDTWEPIEGLSKCQDLIQDFVLKGFKAK 898
Query: 439 ILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMEN 498
ILP PGD D ICGGPPCQG+SG+NR RN + +D +NRQ++VFMD++ +LKPKYVLMEN
Sbjct: 899 ILPRPGDADVICGGPPCQGISGYNRHRNADSPFDDERNRQIIVFMDIVNFLKPKYVLMEN 958
Query: 499 VVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQY 558
VVDIL+F+ G + RYA+ RLV M+YQ RLGIMAAG YGLPQ+RLRVF WGA P ++LPQ+
Sbjct: 959 VVDILQFAKGSVGRYALSRLVRMNYQARLGIMAAGCYGLPQYRLRVFFWGAHPDERLPQF 1018
Query: 559 PLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYG 618
LPTH+++ + P F+ IVAY Q LEK ++L DAI+DLP V+NNE+ ++ Y
Sbjct: 1019 ALPTHDVILKYGAPTAFERNIVAYDEGQSPDLEKALVLGDAIADLPPVSNNETREQMSYR 1078
Query: 619 TVARTEFQKYIRLRRHDVVNLSSAQMASR---PSLLYDHRPFQVNNDDYERVCCIPKRKG 675
TEFQKYIR + ++ + SA +R S+LYDH P +N DDY RVC IPK+KG
Sbjct: 1079 RPPETEFQKYIRATKWEM--MGSACKGTRKAEKSVLYDHLPLPLNEDDYLRVCRIPKKKG 1136
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIV 735
ANFRDLPGV+VG +N R DP E + L SGK +VPDYA+ F STKPF RLWWDE V
Sbjct: 1137 ANFRDLPGVVVGANNVARRDPKTE-MELPSGKQMVPDYALNFSEGKSTKPFARLWWDETV 1195
Query: 736 NTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
TV+T+ PH + LHP QDRVLT+RE+ARLQGFPD Y+ G VKER
Sbjct: 1196 PTVLTKPDPHCQAYLHPEQDRVLTVRESARLQGFPDYYKFCGQVKER 1242
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 118/184 (64%), Gaps = 16/184 (8%)
Query: 63 KNKPDSDLFFVSPPVSADEALKRYPDRYKALN--------------EEEEVLQARCHYTQ 108
K K + F V PV +EA +R+P RY+ + E+E VL +CHY+Q
Sbjct: 65 KGKGKAVSFLVGDPVPDEEARQRWPWRYEEKDRQSKGQSVKPNDDEEDELVLDVKCHYSQ 124
Query: 109 ASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLAC 168
A ++ C++NLGD AYVK ++G +YI RI+E F+++D E YF+ +WF+R EDTV+++
Sbjct: 125 AEIEKCIFNLGDCAYVKGKKGGRNYIGRILEFFKTMDDEDYFRVQWFFRPEDTVMEEEGA 184
Query: 169 LVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLT 228
++KR+F S++ +DN L+CIVSK I ++ +++L K K+I PCD YYDMKY + + T
Sbjct: 185 FHEKKRLFYSNLVNDNLLDCIVSKVNIIQITPSVNL--KSKSILPCDFYYDMKYLIDYST 242
Query: 229 FLNI 232
F +
Sbjct: 243 FCTM 246
>gi|357490109|ref|XP_003615342.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355516677|gb|AES98300.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 800
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 320/723 (44%), Positives = 426/723 (58%), Gaps = 117/723 (16%)
Query: 72 FVSPPVSADEALKRYPDRY----------KALNEEEEVLQARCHYTQASVDG-CLYNLGD 120
F+ P+ EA R+P RY ++ ++E+EVLQARCHYT+A VDG +Y L D
Sbjct: 123 FLRDPILLKEAKLRWPKRYLEKEKKKTRSRSNSDEDEVLQARCHYTEAKVDGGVIYKLYD 182
Query: 121 DAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDV 180
DA+VK E+ +I +I+E+FE+VDGE YF KRVFLS+V
Sbjct: 183 DAHVKGEKDDYHFICKIMEMFEAVDGELYFTP--------------------KRVFLSEV 222
Query: 181 EDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNINNESN-RR 239
+DDNPL+C+V K IA + D +A IPPC Y D Y L + ++ E N +
Sbjct: 223 QDDNPLDCLVEKLTIALLELKKDFDATNDVIPPCKYYCDTLYLLEISSTISNETEVNAKS 282
Query: 240 DSDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINP 299
+ D+ S I T N +PE+ LLDLYSGCG MSTGLC LSG +VT+W +D+N
Sbjct: 283 EVDSKSAI---TDINDDKKKPELKLLDLYSGCGGMSTGLCQWRILSGSDIVTKWVVDLNK 339
Query: 300 HACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEEEEEE 359
AC QSL E E
Sbjct: 340 DAC--------------------------------------------QSLKLNHPETEVR 355
Query: 360 EEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKG 419
EEE++ D V Y D NK PG+Y KV WKGY +D WEPI G
Sbjct: 356 NEEEDDVHD----------------VRYDDANKETGPGLYIKVSWKGYNYDKDIWEPING 399
Query: 420 LSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQL 479
LS CKE +K+FVT+G++S + GFNRFRN L+D KN+QL
Sbjct: 400 LSNCKEMIKDFVTRGFKS--------------------IRGFNRFRNFANPLDDEKNKQL 439
Query: 480 LVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQ 539
+V+MD+++YL+P++ LMENVV++L+F GFL RYA+GRLV M+YQ+RLGI+AA +YGL Q
Sbjct: 440 MVYMDIVQYLQPRFTLMENVVNLLRFLEGFLGRYALGRLVQMNYQSRLGILAARAYGLRQ 499
Query: 540 FRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDA 599
FRLRVFLWG P + L Q+PL TH+++ RG +P EF+ +VAY+ QL+K + L+DA
Sbjct: 500 FRLRVFLWGGTPSENLHQFPLRTHDVIERGFVPVEFEGCLVAYSEGHSAQLQKKLELNDA 559
Query: 600 ISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQV 659
ISDL + NNES D+ Y +FQK+IRL + +++ S + S S+L+D R +++
Sbjct: 560 ISDLFSIENNESRDDMDYCGPLLIDFQKFIRLSQSEILG-GSIKKKSPKSMLHDRRSYEM 618
Query: 660 NNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEH 719
N DDY+ C IPKRKGA FRDLP V + + KV+ +P ++R L SGKPLVP+YA+ F
Sbjct: 619 NFDDYQCACRIPKRKGACFRDLPCVRM-QNKKVKLNPDVKREFLASGKPLVPNYAITFVC 677
Query: 720 QSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
+S PF R+WWD+ V TVVTRA+PHN+ +LHP QDRVL+IR NARLQGFPD Y+L G
Sbjct: 678 GTSPLPFARIWWDKTVPTVVTRAEPHNQKILHPEQDRVLSIRGNARLQGFPDFYKLCGSS 737
Query: 780 KER 782
KER
Sbjct: 738 KER 740
>gi|2865428|gb|AAC02667.1| chromomethylase [Arabidopsis thaliana]
Length = 560
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 283/558 (50%), Positives = 389/558 (69%), Gaps = 23/558 (4%)
Query: 59 KKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALN-----------------EEEEVL- 100
K+ ++ +P+SDL F P+S E+ R+P RY++ E+EE++
Sbjct: 6 KQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQSKKTKLQAPTKKPANKGGKKEDEEIIK 65
Query: 101 QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAED 160
QA+CH+ +A VDG L NL DD YV G + +IA+++ELFE+ DG PY + RW+YR ED
Sbjct: 66 QAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRWYYRPED 125
Query: 161 TVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAT-NMDLEAKQKNIPPCDLYYD 219
T+I+ + LV KRVFLS+ E+DNPL CI SK IA+V + +Q+ IPPCD YYD
Sbjct: 126 TLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRIEQRVIPPCDYYYD 185
Query: 220 MKYTLPHLTFLNINNESNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLC 279
MKY +P+L F + ++ S+ S +S + + + + E LLDLYSGCGAMSTG C
Sbjct: 186 MKYEVPYLNFTSTDDGSDASSSLSSDSALN---CFENLHKDEKFLLDLYSGCGAMSTGFC 242
Query: 280 IGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIY 339
+GAS+SGVKL+T+W++DIN AC SLK NHPET+VRNEAA+DFL+LLKEW +LC+ FS+
Sbjct: 243 MGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFLALLKEWKRLCEKFSLV 302
Query: 340 DTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVY 399
+ + P +S++ + +EE EE ++ +E A + EFEVE+ + + +GDP T + +
Sbjct: 303 SSTE-PVESISELEDEEVEENDDIDEASTGAELEPGEFEVEKFLGIMFGDPQGTGEKTLQ 361
Query: 400 FKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVS 459
VRWKGY S DTWEP GL CKEKLKE+V G++S++LPLPG V +CGGPPCQG+S
Sbjct: 362 LMVRWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLPGTVYTVCGGPPCQGIS 421
Query: 460 GFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLV 519
G+NR+RN +A LED KN+QLLVF+D+I++LKP YVLMENVVD+L+FS GFLAR+AV V
Sbjct: 422 GYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFV 481
Query: 520 SMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEII 579
+M+YQTRLG+MAAGSYGLPQ R RVFLW A+P +KLP YPLPTHE+ + P EF+++
Sbjct: 482 AMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKKFNTPKEFKDLQ 541
Query: 580 VAYANNQPCQLEKGVLLS 597
V + +L+ + L+
Sbjct: 542 VGRIQMEFLKLDNALTLA 559
>gi|2865425|gb|AAC02665.1| chromomethylase [Arabidopsis thaliana]
gi|2865430|gb|AAC02668.1| chromomethylase [Arabidopsis thaliana]
Length = 560
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 283/558 (50%), Positives = 387/558 (69%), Gaps = 23/558 (4%)
Query: 59 KKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALN-----------------EEEEVL- 100
K+ ++ +P+SDL F P+S E+ R+P RY++ E+EE++
Sbjct: 6 KQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQSKKTKLQAPTKKPANKGGKKEDEEIIK 65
Query: 101 QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAED 160
QA+CH+ +A VDG L NL DD YV G + +IA+++ELFE+ DG PY + RW+YR ED
Sbjct: 66 QAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRWYYRPED 125
Query: 161 TVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAT-NMDLEAKQKNIPPCDLYYD 219
T+I+ + LV KRVFLS+ E+DNPL CI SK IA+V + +Q+ IPPCD YYD
Sbjct: 126 TLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRIEQRVIPPCDYYYD 185
Query: 220 MKYTLPHLTFLNINNESNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLC 279
MKY +P +LN + + D+ +S + S + + E LLDLYSGCGAMSTG C
Sbjct: 186 MKYEVP---YLNFTSADDGSDASSSLSSDSALNCFENLHKDEKFLLDLYSGCGAMSTGFC 242
Query: 280 IGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIY 339
+GAS+SGVKL+T+W++DIN AC SLK NHPET+VRNEAA+DFL+LLKEW +LC+ FS+
Sbjct: 243 MGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFLALLKEWKRLCEKFSLV 302
Query: 340 DTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVY 399
+ + P +S++ + +EE EE ++ +E A + EFEVE+ + + +GDP T + +
Sbjct: 303 SSTE-PVESISELEDEEVEENDDIDEASTGAELEPGEFEVEKFLGIMFGDPQGTGEKTLQ 361
Query: 400 FKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVS 459
VRWKGY S DTWEP GL CKEKLKE+V G++S++LPLPG V +CGGPPCQG+S
Sbjct: 362 LMVRWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLPGTVYTVCGGPPCQGIS 421
Query: 460 GFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLV 519
G+NR+RN +A LED KN+QLLVF+D+I++LKP YVLMENVVD+L+FS GFLAR+AV V
Sbjct: 422 GYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFV 481
Query: 520 SMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEII 579
+M+YQTRLG+MAAGSYGLPQ R RVFLW A+P +KLP YPLPTHE+ + P EF+++
Sbjct: 482 AMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKKFNTPKEFKDLQ 541
Query: 580 VAYANNQPCQLEKGVLLS 597
V + +L+ + L+
Sbjct: 542 VGRIQMEFLKLDNALTLA 559
>gi|1297185|gb|AAA98912.1| theoretical protein with similarity to Swiss-Prot Accession Number
P34881 DNA (cytosine-5-) methyltransferase [Arabidopsis
thaliana]
Length = 620
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 264/489 (53%), Positives = 343/489 (70%), Gaps = 29/489 (5%)
Query: 261 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAAD 320
E LLDLYSGCGAMSTG C+GAS+SGVKL+T+W++DIN AC SLK NHPET+VRNEAA+
Sbjct: 142 EKFLLDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAE 201
Query: 321 DFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVE 380
DFL+LLKEW +LC+ FS+ + + P +S++ + +EE EE ++ +E A + EFEVE
Sbjct: 202 DFLALLKEWKRLCEKFSLVSSTE-PVESISELEDEEVEENDDIDEASTGAELEPGEFEVE 260
Query: 381 RLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNIL 440
+ + + +GDP T + + VRWKGY S DTWEP GL CKEKLKE+V G++S++L
Sbjct: 261 KFLGIMFGDPQGTGEKTLQLMVRWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLL 320
Query: 441 PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVV 500
PL G V +CGGPPCQG+SG+NR+RN +A LED KN+QLLVF+D+I++LKP YVLMENVV
Sbjct: 321 PLSGTVYTVCGGPPCQGISGYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVV 380
Query: 501 DILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPL 560
D+L+FS GFLAR+AV V+M+YQTRLG+MAAGSYGLPQ R RVFLW A+P
Sbjct: 381 DLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQP--------- 431
Query: 561 PTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTV 620
E + G I EF +L+ + L+DAISDLP VTN + D Y
Sbjct: 432 --SEDLQVGRIQMEF------------LKLDNALTLADAISDLPPVTNYVANDVMDYNDA 477
Query: 621 A-RTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFR 679
A +TEF+ +I L+R + + + +R L+DH+P + +DD ERV IPK+KGAN+R
Sbjct: 478 APKTEFENFISLKRSETLLPAFGGDPTRR--LFDHQPLVLGDDDLERVSYIPKQKGANYR 535
Query: 680 DLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVV 739
D+PGVLV +NK +P R LKSGK +VP YA+ F S KPFGRLW DEIVNTVV
Sbjct: 536 DMPGVLVH-NNKAEINPRF-RAKLKSGKNVVPAYAISFIKGKSKKPFGRLWGDEIVNTVV 593
Query: 740 TRAQPHNRI 748
TRA+PHN++
Sbjct: 594 TRAEPHNQV 602
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 23/89 (25%)
Query: 59 KKTQKNKPDSDLFFVSPPVSADEALKRYPDRY----------------KALN------EE 96
K+ ++ +P+SDL F P+S E+ R+P RY K N E+
Sbjct: 6 KQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQSKKTKLQAPTKKPANKGYNFTGGKKED 65
Query: 97 EEVL-QARCHYTQASVDGCLYNLGDDAYV 124
EE++ QA+CH+ +A VDG L NL DD YV
Sbjct: 66 EEIIKQAKCHFDKALVDGVLINLNDDVYV 94
>gi|115480860|ref|NP_001064023.1| Os10g0104900 [Oryza sativa Japonica Group]
gi|113638632|dbj|BAF25937.1| Os10g0104900, partial [Oryza sativa Japonica Group]
Length = 406
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/341 (63%), Positives = 263/341 (77%), Gaps = 3/341 (0%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
GDVD ICGGPPCQG+SGFNRFRN + L+D KN+Q++ FMD++ YLKPKYVLMENVVDIL
Sbjct: 1 GDVDVICGGPPCQGISGFNRFRNRKEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDIL 60
Query: 504 KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
KF+ G+L RYA+ RLV+M YQ RLG+M AG YGLPQFR+RVFLWGA P LP+YPLPTH
Sbjct: 61 KFADGYLGRYALSRLVAMKYQARLGMMVAGCYGLPQFRMRVFLWGALPTMVLPKYPLPTH 120
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVART 623
+V RG PN F + IVAY Q L+ +LL DAISDLP V N++ + +YG+ +T
Sbjct: 121 NVVVRGGAPNAFSQSIVAYDETQKPTLKNALLLGDAISDLPEVNNHQPNEVMEYGSSPKT 180
Query: 624 EFQKYIRLRRHDVVNLSSAQMASRPSL--LYDHRPFQVNNDDYERVCCIPKRKGANFRDL 681
EFQ+YIRL R ++++ SS + P L L DH+P ++N DD+ERV IP +KGANFRDL
Sbjct: 181 EFQRYIRLSRKEMLD-SSFEGKDGPDLGKLLDHQPLKLNKDDHERVQQIPVKKGANFRDL 239
Query: 682 PGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR 741
GV VG +N V WDP + RV L SGKPLVPDYAM F S KPFGRLWWDE V TVVTR
Sbjct: 240 KGVRVGANNIVEWDPDVPRVYLSSGKPLVPDYAMSFIKGRSLKPFGRLWWDETVPTVVTR 299
Query: 742 AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
A+PHN+I+LHP+Q RVLT+RENARLQGFPD Y++FGP+KE+
Sbjct: 300 AEPHNQIILHPNQARVLTVRENARLQGFPDYYKMFGPIKEK 340
>gi|2832630|emb|CAA16759.1| putative protein [Arabidopsis thaliana]
gi|7268696|emb|CAB78904.1| putative protein [Arabidopsis thaliana]
Length = 1171
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 242/587 (41%), Positives = 340/587 (57%), Gaps = 87/587 (14%)
Query: 54 VTRVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALNEEEEVLQARCHYTQASVDG 113
VTR + Q + S FF+ P+S +EA +R+ RY+
Sbjct: 507 VTRTAVQEQNKR--SICFFIGEPLSCEEAQERWRWRYE---------------------- 542
Query: 114 CLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRK 173
+K E+ ++ + + V Y+ +++ A D++
Sbjct: 543 ----------LKMEKATSEFSGFTEQRIQCV-----------YKFFSFIMERQATNHDKR 581
Query: 174 RVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNIN 233
R+F S V +DNP++C++SK + +V+ + L+ N D Y+DM+Y + + TF +
Sbjct: 582 RLFYSTVMNDNPVDCLISKVTVLQVSPRVGLKP---NSIKSDYYFDMEYCVEYSTFQTLR 638
Query: 234 NES-------NRRD--SDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASL 284
N N+ + +D T S+E+ E+ +LDLYSGCG MSTGL +GA +
Sbjct: 639 NRKCSSKTSENKLECCADVVPTESTESILKKKSFSGELPVLDLYSGCGGMSTGLSLGAKI 698
Query: 285 SGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKV 344
SGV +VT+WA+D N ACKSLK NHP T+VRN+AA DFL LLKEW KLC+ + +++ D
Sbjct: 699 SGVDVVTKWAVDQNTAACKSLKLNHPNTQVRNDAAGDFLQLLKEWDKLCKRY-VFNND-- 755
Query: 345 PEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRW 404
Q + + +E + D + +EE+EVE+L+ +C+GD +KT K G+ FKV W
Sbjct: 756 --QRTDTLRSVNSTKETSGSSSSSDDDSDSEEYEVEKLVDICFGDHDKTGKNGLKFKVHW 813
Query: 405 KGYGPSEDTWEPIKGL-------------------------SKCKEKLKEFVTKGYRSNI 439
KGY EDTWE + L S C++ ++EFVT G++S I
Sbjct: 814 KGYRSDEDTWELAEELRYMLQNNVKKRFCCYLELINFVWNFSNCQDAIREFVTSGFKSKI 873
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LPLPG V ICGGPPCQG+SG+NR RN + L D +N+Q++VFMD++EYLKP YVLMENV
Sbjct: 874 LPLPGRVGVICGGPPCQGISGYNRHRNVDSPLNDERNQQIIVFMDIVEYLKPSYVLMENV 933
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
VDIL+ G L RYA+ RLV+M YQ RLGIM AG YGL QFR RVF+WGA P K LP +P
Sbjct: 934 VDILRMDKGSLGRYALSRLVNMRYQARLGIMTAGCYGLSQFRSRVFMWGAVPNKNLPPFP 993
Query: 560 LPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLV 606
LPTH+++ R +P EF+ +VAYA QP +LEK ++L DAISDLP V
Sbjct: 994 LPTHDVIVRYGLPLEFERNVVAYAEGQPRKLEKALVLKDAISDLPHV 1040
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%), Gaps = 7/68 (10%)
Query: 722 STKPFGRLWWDEIVNTVVTRAQPHNRI-------LLHPSQDRVLTIRENARLQGFPDCYQ 774
++ PF RLWWDE V TV+T H+++ LLHP QDRVLTIRE+ARLQGFPD +Q
Sbjct: 1050 NSGPFARLWWDETVPTVLTVPTCHSQVPSKPFQALLHPEQDRVLTIRESARLQGFPDYFQ 1109
Query: 775 LFGPVKER 782
G +KER
Sbjct: 1110 FCGTIKER 1117
>gi|110288523|gb|ABB46585.2| DNA cytosine methyltransferase MET2a, putative, expressed [Oryza
sativa Japonica Group]
Length = 371
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/306 (62%), Positives = 233/306 (76%), Gaps = 3/306 (0%)
Query: 479 LLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLP 538
++ FMD++ YLKPKYVLMENVVDILKF+ G+L RYA+ RLV+M YQ RLG+M AG YGLP
Sbjct: 1 MVTFMDIVAYLKPKYVLMENVVDILKFADGYLGRYALSRLVAMKYQARLGMMVAGCYGLP 60
Query: 539 QFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSD 598
QFR+RVFLWGA P LP+YPLPTH +V RG PN F + IVAY Q L+ +LL D
Sbjct: 61 QFRMRVFLWGALPTMVLPKYPLPTHNVVVRGGAPNAFSQSIVAYDETQKPTLKNALLLGD 120
Query: 599 AISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSL--LYDHRP 656
AISDLP V N++ + +YG+ +TEFQ+YIRL R ++++ SS + P L L DH+P
Sbjct: 121 AISDLPEVNNHQPNEVMEYGSSPKTEFQRYIRLSRKEMLD-SSFEGKDGPDLGKLLDHQP 179
Query: 657 FQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMK 716
++N DD+ERV IP +KGANFRDL GV VG +N V WDP + RV L SGKPLVPDYAM
Sbjct: 180 LKLNKDDHERVQQIPVKKGANFRDLKGVRVGANNIVEWDPDVPRVYLSSGKPLVPDYAMS 239
Query: 717 FEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLF 776
F S KPFGRLWWDE V TVVTRA+PHN+I+LHP+Q RVLT+RENARLQGFPD Y++F
Sbjct: 240 FIKGRSLKPFGRLWWDETVPTVVTRAEPHNQIILHPNQARVLTVRENARLQGFPDYYKMF 299
Query: 777 GPVKER 782
GP+KE+
Sbjct: 300 GPIKEK 305
>gi|169977308|emb|CAQ18901.1| chromomethylase [Nicotiana sylvestris]
Length = 308
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 169/267 (63%), Positives = 201/267 (75%), Gaps = 10/267 (3%)
Query: 516 GRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEF 575
GRLV M+YQ R+G+MAAG+YGLPQFR+RVF+WGA +KLPQYPLPTH+++ RGVIP EF
Sbjct: 1 GRLVGMNYQARMGMMAAGAYGLPQFRMRVFMWGALSSEKLPQYPLPTHKVIVRGVIPTEF 60
Query: 576 QEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHD 635
+ VA + L+K + L DA+SDLP V NNE DE Y ++FQ +IRL R
Sbjct: 61 ESNTVALDEGREIDLKKELFLGDALSDLPSVENNEQRDEMPYTNEPTSDFQHFIRLGRDG 120
Query: 636 VVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWD 695
+ S+LYDHRP Q+N+DDY+RVC IPKR+GANFRDLPGV V DNKV WD
Sbjct: 121 ALG----------SVLYDHRPLQLNDDDYQRVCQIPKREGANFRDLPGVRVRSDNKVEWD 170
Query: 696 PSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQD 755
P +ERV L SGKPLVPDYAM F SSTKPFGRLWWDE V TVVTRA+PHN+ ++HP Q+
Sbjct: 171 PDVERVKLPSGKPLVPDYAMSFVGGSSTKPFGRLWWDETVPTVVTRAEPHNQTIIHPQQN 230
Query: 756 RVLTIRENARLQGFPDCYQLFGPVKER 782
RVLTIRENARLQGFPD Y+L GP+KER
Sbjct: 231 RVLTIRENARLQGFPDYYKLTGPIKER 257
>gi|224031943|gb|ACN35047.1| unknown [Zea mays]
Length = 329
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 162/263 (61%), Positives = 195/263 (74%), Gaps = 1/263 (0%)
Query: 521 MDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIV 580
M YQ RLG+M AG YGLPQFR+RVFLWGA LP+YPLPT+++V RG PN F + +V
Sbjct: 1 MKYQARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMV 60
Query: 581 AYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLS 640
AY Q L+K +LL DA SDLP V N++ D +YG +TEFQ+YIRL R D+++ S
Sbjct: 61 AYDETQRPSLKKALLLGDAFSDLPKVENHQPNDVMEYGGSPKTEFQRYIRLGRKDMLDWS 120
Query: 641 SAQMAS-RPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSME 699
+ A L DH+P ++NNDDYERV IP +KGANFRDL GV VG +N V WDP +E
Sbjct: 121 FGEEAGPDEGKLLDHQPLRLNNDDYERVKQIPVKKGANFRDLKGVKVGANNVVEWDPEVE 180
Query: 700 RVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLT 759
RV L SGKPLVPDYAM F S KPFGRLWWDE V TVVTRA+PHN+++LHP+Q RVLT
Sbjct: 181 RVYLSSGKPLVPDYAMSFIKGKSLKPFGRLWWDETVPTVVTRAEPHNQVILHPTQARVLT 240
Query: 760 IRENARLQGFPDCYQLFGPVKER 782
IRENARLQGFPD Y+LFGP+KE+
Sbjct: 241 IRENARLQGFPDYYRLFGPIKEK 263
>gi|194688394|gb|ACF78281.1| unknown [Zea mays]
Length = 322
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 156/255 (61%), Positives = 190/255 (74%), Gaps = 1/255 (0%)
Query: 529 IMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPC 588
+M AG YGLPQFR+RVFLWGA LP+YPLPT+++V RG PN F + +VAY Q
Sbjct: 1 MMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMVAYDETQKP 60
Query: 589 QLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMAS-R 647
L+K +LL DAISDLP V N++ D +YG +TEFQ+YIRL R D+++ S + A
Sbjct: 61 SLKKALLLGDAISDLPKVQNHQPNDVMEYGGSPKTEFQRYIRLSRKDMLDWSFGEGAGPD 120
Query: 648 PSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGK 707
L DH+P ++NNDDYERV IP +KGANFRDL GV VG +N V WDP +ERV L SGK
Sbjct: 121 EGKLLDHQPLRLNNDDYERVQQIPVKKGANFRDLKGVRVGANNIVEWDPEIERVKLSSGK 180
Query: 708 PLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQ 767
PLVPDYAM F S KPFGRLWWDE V TVVTRA+PHN++++HP+Q RVLTIRENARLQ
Sbjct: 181 PLVPDYAMSFIKGKSLKPFGRLWWDETVPTVVTRAEPHNQVIIHPTQARVLTIRENARLQ 240
Query: 768 GFPDCYQLFGPVKER 782
GFPD Y+LFGP+KE+
Sbjct: 241 GFPDYYRLFGPIKEK 255
>gi|297604073|ref|NP_001054957.2| Os05g0224800 [Oryza sativa Japonica Group]
gi|57863807|gb|AAW56861.1| unknow protein [Oryza sativa Japonica Group]
gi|255676144|dbj|BAF16871.2| Os05g0224800 [Oryza sativa Japonica Group]
Length = 304
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 135/254 (53%), Positives = 176/254 (69%), Gaps = 1/254 (0%)
Query: 530 MAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQ 589
MAAG YGLPQFR+RVFL G +KLP +PLPTHE + + P F+ +V + N+ P Q
Sbjct: 1 MAAGCYGLPQFRMRVFLLGCHSKEKLPPFPLPTHEAIVKNGCPLAFERNLVGWPNDTPMQ 60
Query: 590 LEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVN-LSSAQMASRP 648
L + ++L D +SDLP V N ES DE Y +TEFQ+YIR +V + S+
Sbjct: 61 LARPIVLEDILSDLPEVANGESRDEMLYVKGPQTEFQRYIRSFNVEVHGPRAHVTKDSKS 120
Query: 649 SLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKP 708
S LYDHRP ++ND+Y+R+ IPKRKGANFRDL GV+VGPDN R DP+ ERV+L SG+P
Sbjct: 121 SKLYDHRPLVLDNDNYQRILQIPKRKGANFRDLSGVIVGPDNVARLDPTKERVLLPSGRP 180
Query: 709 LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQG 768
LV D + +E+ S +PFGR+WWDE+V TV+T + L+HP+QDR+LTIRE+ARLQG
Sbjct: 181 LVLDCILAYENGKSLRPFGRVWWDEVVGTVLTVPNARMQALIHPAQDRLLTIRESARLQG 240
Query: 769 FPDCYQLFGPVKER 782
FPD Y+ G VK+R
Sbjct: 241 FPDNYRFRGTVKDR 254
>gi|384244940|gb|EIE18436.1| S-adenosyl-L-methionine-dependent methyltransferase, partial
[Coccomyxa subellipsoidea C-169]
Length = 418
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 144/348 (41%), Positives = 204/348 (58%), Gaps = 15/348 (4%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
DVD + GGPPCQGVSG NR + D +NRQ+ F DVIE+ +P YVLMENV+DI K
Sbjct: 1 DVDAVMGGPPCQGVSGLNRHAKRADIVNDPRNRQVQAFYDVIEWFQPGYVLMENVLDIFK 60
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP-FKKLPQYPLPTH 563
G A++A RL++M YQTRLG +AA +G PQ R R F+WGA+ ++LP +P P+H
Sbjct: 61 KQDGMYAKFAASRLLNMRYQTRLGCIAACDHGAPQGRWRAFMWGAKAGVEQLPAFPEPSH 120
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKG-VLLSDAISDLPLVTNNESEDERKYGTVAR 622
V +G +P+ E IV + + + V + D +SDLP ++N + + +Y + +
Sbjct: 121 FAVFQGGVPHSASECIVGFTSEASRDAARQMVFMGDVLSDLPEISNYTTAEAAQYASDPK 180
Query: 623 TEFQKYIR-----LRRHDVVNLSSAQMASRP-SLLYDHRPFQVNNDDYERVCCIPKRKGA 676
T +Q ++R + D L A+ A + L DHR +N DD+ R C +P +K A
Sbjct: 181 TPYQMWLRRQPPAVHMFDEQVLKEAEHAEKAVGPLRDHRSLCLNFDDHLRCCSVPSKKDA 240
Query: 677 NFRDLPGVLVGPDNK----VRWDPSMERVMLKSGKPLVPDYAMKFEHQSST---KPFGRL 729
NFR++PGV+ D V V L +G L P + + ++ S FGR+
Sbjct: 241 NFREMPGVITHGDGAVCGVVGAGCPGTTVFLPTGDLLCPRWCVTYKQGKSGGRHGCFGRM 300
Query: 730 WWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
W+DEI TVV RA+PHN L+HP+Q RV++IRENAR QGFPD + L G
Sbjct: 301 WYDEIQPTVVGRAEPHNLRLIHPTQGRVVSIRENARCQGFPDYFALAG 348
>gi|224076024|ref|XP_002304878.1| hypothetical protein POPTRDRAFT_555246 [Populus trichocarpa]
gi|222842310|gb|EEE79857.1| hypothetical protein POPTRDRAFT_555246 [Populus trichocarpa]
Length = 250
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/230 (52%), Positives = 158/230 (68%), Gaps = 21/230 (9%)
Query: 378 EVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRS 437
+VE+++ +CYGDP K YGP DTWEPI GL C+E +K FV GY S
Sbjct: 18 KVEKILEICYGDPKKN-------------YGPDYDTWEPISGLINCREAIKNFVMHGYLS 64
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
NILPLPGDVD ICGGPPCQG+SGFNRFRN ++ L+D KN+QL+VFMD +++L+PK+VL+E
Sbjct: 65 NILPLPGDVDVICGGPPCQGISGFNRFRNTKSPLDDPKNKQLIVFMDTVDFLRPKFVLIE 124
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NVVD+LKF+ GF+ RYA+G L +M YQ RLG++ + R F+ G + K PQ
Sbjct: 125 NVVDLLKFADGFIGRYAMGCLTNMKYQARLGMLGHTVF-------RSFVCGFF-YGKPPQ 176
Query: 558 YPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVT 607
YPLPTH+++ RG+ P EF+ VAY QLE + L DAISDLP ++
Sbjct: 177 YPLPTHDVLGRGIAPVEFEGNTVAYEEGVQAQLENKLFLKDAISDLPALS 226
>gi|388514021|gb|AFK45072.1| unknown [Lotus japonicus]
Length = 219
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 103/167 (61%), Positives = 130/167 (77%), Gaps = 2/167 (1%)
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+Y +TEFQK+IRL +++++ +S+ + S L+DHR ++N DDY+RVC IPK+KG
Sbjct: 2 QYDEPPQTEFQKFIRLTKNEMLGISNQKRLK--STLHDHRSLELNVDDYQRVCRIPKKKG 59
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIV 735
A FRDLPGV VGPDNKV WDP ++R L+S KPLVP+YAM F S+KPF RLWWDE V
Sbjct: 60 ACFRDLPGVRVGPDNKVEWDPDVQREYLESKKPLVPNYAMSFVGGKSSKPFARLWWDETV 119
Query: 736 NTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
TVVTRA+PHN+ ++HP QDRVL+IRENARLQGFPD Y+L GPVK R
Sbjct: 120 PTVVTRAEPHNQAIIHPEQDRVLSIRENARLQGFPDYYKLCGPVKAR 166
>gi|2895087|gb|AAC39355.1| Met1-type cytosine DNA-methyltransferase [Daucus carota]
Length = 1545
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/352 (36%), Positives = 184/352 (52%), Gaps = 49/352 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LPLPG VDFI GGPPCQG SG NRF Q++ ++ +L F+ +Y +PKY L+ENV
Sbjct: 1198 LPLPGQVDFINGGPPCQGFSGMNRFN--QSSWSKVQCEMILAFLSFADYYRPKYFLLENV 1255
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ F+ G R A+ L+ M YQ R GI+ AG+YG+PQ R R F+W A P + LP++P
Sbjct: 1256 RTFVSFNKGQTFRLAIASLLDMGYQVRFGILEAGAYGVPQSRKRAFIWAASPEETLPEWP 1315
Query: 560 LPTHEIVA---RGVIP-NEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H A + +P N++ + + P + + + D I DLP+V+N S
Sbjct: 1316 EPMHVFAAPELKIALPENKYYAAVRSTQTGAPF---RSITVRDTIGDLPMVSNGASRTSI 1372
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+Y + FQK IR A M +L DH ++N + R IPKR+G
Sbjct: 1373 EYQMDPISWFQKKIR-----------ANMM----VLTDHISKEMNELNLIRCQRIPKRRG 1417
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRL 729
A+++DLP E+V L SG+ + +P+ A + H FGRL
Sbjct: 1418 ADWQDLPD---------------EKVKLSSGQLVDLIPWCLPNTAKR--HNQWKGLFGRL 1460
Query: 730 WWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
W+ T +T QP ++ HP Q R++T+RE AR QGFPD YQ +G +
Sbjct: 1461 DWEGSFPTSITDPQPMGKVGMCFHPDQHRIVTVRECARSQGFPDSYQFYGNI 1512
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 262 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPET 312
++ LD+++GCG +S GL SGV T+WAI+ A + K NHPE+
Sbjct: 1108 LATLDIFAGCGGLSEGL----QKSGV-CTTKWAIEYEEAAGDAFKLNHPES 1153
>gi|224144433|ref|XP_002325288.1| DNA methyltransferase [Populus trichocarpa]
gi|222862163|gb|EEE99669.1| DNA methyltransferase [Populus trichocarpa]
Length = 1549
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 131/355 (36%), Positives = 184/355 (51%), Gaps = 49/355 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LPLPG VDFI GGPPCQG SG NRF Q+ ++ +L F+ +Y +PKY L+ENV
Sbjct: 1202 LPLPGQVDFINGGPPCQGFSGMNRFN--QSTWSKVQCEMILAFLSFADYFRPKYFLLENV 1259
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R + L+ M YQ R GI+ AG+YG+ Q R R F+W A P + LP++P
Sbjct: 1260 RNFVSFNKGQTFRLTIASLLQMGYQVRFGILEAGAYGVSQSRKRAFIWAASPEEILPEWP 1319
Query: 560 LPTHEIVA---RGVIPNEFQEIIV-AYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H A + + + Q V + A P + + + D I DLP V N S+
Sbjct: 1320 EPMHVFAAPELKITLSEKSQYAAVRSTAYGAPF---RAITVRDTIGDLPDVANGASKTNL 1376
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+YG + FQK I R D+V +L DH ++N + R IPKR G
Sbjct: 1377 EYGNDPISWFQKKI---RGDMV------------VLTDHISKEMNELNLIRCKNIPKRPG 1421
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRL 729
A++RDLP E+V L +G+ + +P+ A + H FGRL
Sbjct: 1422 ADWRDLPD---------------EKVKLSTGQMVDLIPWCLPNTAKR--HNQWKGLFGRL 1464
Query: 730 WWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
W+ T +T QP ++ HP QDR+LT+RE AR QGFPD YQ FG ++ +
Sbjct: 1465 DWEGNFPTSITDPQPMGKVGMCFHPEQDRILTVRECARSQGFPDNYQFFGNIQHK 1519
>gi|224076026|ref|XP_002304879.1| hypothetical protein POPTRDRAFT_555247 [Populus trichocarpa]
gi|222842311|gb|EEE79858.1| hypothetical protein POPTRDRAFT_555247 [Populus trichocarpa]
Length = 363
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 114/255 (44%), Positives = 159/255 (62%), Gaps = 24/255 (9%)
Query: 72 FVSPPVSADEALKRYPDRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAV 131
FV + EA K++P RY ++++ARCHYT+A VD +Y+L DA+V+A +G
Sbjct: 109 FVGAQIPGAEARKKWPHRYA-----NKIVKARCHYTRAEVDRIIYDLYYDAHVQASDGEP 163
Query: 132 DYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVS 191
DYI RI E+FESVD YF +W+YR+ T+IKD + D K VF S++ +DNPL C+
Sbjct: 164 DYICRISEMFESVDRTLYFTTQWYYRSTVTIIKDKY-ISDPKCVFFSEIRNDNPLECLTW 222
Query: 192 KAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNINNESNRRDSDASSTISS-- 249
K I +A N+D E ++ CD Y DM Y LP+ TF+ + E+N + SSTIS+
Sbjct: 223 KLNIVRLALNVDPENRRARSSGCDFYCDMLYLLPYSTFVRLPTENNTTGPE-SSTISNDI 281
Query: 250 ----------ETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINP 299
E S + E++LLDLYSGCGAMSTGLC+ G+ LVT+WA+D+N
Sbjct: 282 DAAGVKSECDEVCETSGSSKSEVALLDLYSGCGAMSTGLCL-----GLNLVTKWAVDLNI 336
Query: 300 HACKSLKFNHPETKV 314
+AC+SL+ NHPET+V
Sbjct: 337 NACQSLRLNHPETQV 351
>gi|2895089|gb|AAC39356.1| Met2-type cytosine DNA-methyltransferase [Daucus carota]
Length = 1761
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/352 (36%), Positives = 183/352 (51%), Gaps = 48/352 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LPLPG VDFI GGPPCQG SG NRF Q++ ++ +L F+ +Y +PKY L+ENV
Sbjct: 1413 LPLPGQVDFINGGPPCQGFSGMNRFN--QSSWSKVQCEMILAFLSFADYYRPKYFLLENV 1470
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP-QY 558
+ + F+ G R A+ L+ M YQ R GI+ AG++G+PQ R R F+W A P + LP +
Sbjct: 1471 RNFVSFNKGQTFRLAIASLLEMGYQVRFGILEAGAFGVPQSRKRAFIWAASPEETLPGSW 1530
Query: 559 PLPTHEIVA---RGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P P H A + +P + A + Q + + + D I DLP+VTN S+
Sbjct: 1531 PEPMHVFAAPELKVALPG--NKHYAAVRSTQAGAPFRAITVRDTIGDLPMVTNGASKTTL 1588
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+Y + FQK IR A M +L DH ++N + R IPKR+G
Sbjct: 1589 EYRCDPISWFQKNIR-----------ANMM----VLTDHISKEMNELNLIRCQRIPKRRG 1633
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRL 729
A++ DLP E+V L +G+ + +P+ A + H FGRL
Sbjct: 1634 ADWHDLP---------------EEKVKLSTGQLVDLIPWCLPNTAKR--HNQWKGLFGRL 1676
Query: 730 WWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
W+ T +T QP ++ HP QDR++T+RE AR QGFPD YQ +G +
Sbjct: 1677 DWEGNFPTSITDPQPMGKVGMCFHPDQDRIVTVRECARSQGFPDSYQFYGNI 1728
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 262 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
++ LD+++GCG +S GL SGV T+WAI+ A + K NHP+T +
Sbjct: 1323 LATLDIFAGCGGLSEGL----QQSGV-CRTKWAIEYEEPAGDAFKLNHPDTTM 1370
>gi|224077654|ref|XP_002305346.1| DNA methyltransferase [Populus trichocarpa]
gi|222848310|gb|EEE85857.1| DNA methyltransferase [Populus trichocarpa]
Length = 1529
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 129/355 (36%), Positives = 182/355 (51%), Gaps = 49/355 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LPLPG VDFI GGPPCQG SG NRF Q+ ++ +L F+ +Y +PKY L+ENV
Sbjct: 1182 LPLPGQVDFINGGPPCQGFSGMNRFN--QSTWSKVQCEMILAFLSFADYFRPKYFLLENV 1239
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R + L+ M YQ R GI+ AG+YG+ Q R R F+W A P + LP++P
Sbjct: 1240 RNFVSFNKGQTFRLTIASLLQMGYQVRFGILEAGAYGVSQSRKRAFIWAASPEEILPEWP 1299
Query: 560 LPTHEIVA---RGVIPNEFQ-EIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H A + + + Q + + A P + + + D I DLP V N S+
Sbjct: 1300 EPMHVFAAPELKITLSEKSQYSAVRSTAYGAPF---RAITVRDTIGDLPDVGNGASKTNL 1356
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+YG + FQK I R D+V +L DH ++N + R IPKR G
Sbjct: 1357 EYGNDPVSWFQKKI---RGDMV------------VLTDHISKEMNELNLIRCKKIPKRPG 1401
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRL 729
A++RDLP E+V L +G+ + +P+ A + H FGRL
Sbjct: 1402 ADWRDLPD---------------EKVKLSTGQMVDLIPWCLPNTAKR--HNQWKGLFGRL 1444
Query: 730 WWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
W+ T +T QP ++ HP QDR+LT+RE AR QGFPD YQ G + +
Sbjct: 1445 DWEGNFPTSITDPQPMGKVGMCFHPEQDRILTVRECARSQGFPDSYQFSGNIHHK 1499
>gi|302760531|ref|XP_002963688.1| hypothetical protein SELMODRAFT_80009 [Selaginella moellendorffii]
gi|300168956|gb|EFJ35559.1| hypothetical protein SELMODRAFT_80009 [Selaginella moellendorffii]
Length = 1471
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 178/352 (50%), Gaps = 43/352 (12%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP PG+VDFI GGPPCQG SG NRF + I+ +L F+ +Y +P+Y L+ENV
Sbjct: 1125 LPRPGEVDFISGGPPCQGFSGMNRFN--KRNWSKIQCEMVLGFLSYADYFRPRYFLLENV 1182
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R + L+ M YQ R GI+ AG YG+ Q R R +W A P + LP +P
Sbjct: 1183 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILQAGHYGISQSRTRAIIWAAAPDEVLPDWP 1242
Query: 560 LPTHEIV-ARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYG 618
P H A+ IP + A + + + + + D I DLP V N + E YG
Sbjct: 1243 EPVHVFASAQLKIPLSGNSVYAAADDTRGGAPLRSITVRDTIGDLPPVANGTEKPETPYG 1302
Query: 619 TVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANF 678
++ FQK IR ++L DH ++N ++ R IPKR GA++
Sbjct: 1303 NEPQSWFQKNIR---------------GGATVLRDHICKEMNELNFIRCQRIPKRPGADW 1347
Query: 679 RDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRLWWD 732
RDLP E+V L +G+ + +P+ A + H FGRL WD
Sbjct: 1348 RDLPD---------------EKVKLSTGQTVDLIPWCLPNTAER--HNQWKGLFGRLDWD 1390
Query: 733 EIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
T +T QP ++ HP QDR++T+RE AR QGFPD Y+ FG ++ +
Sbjct: 1391 GNFPTSITDPQPMGKVGMCFHPEQDRIVTVRECARSQGFPDSYKFFGTMQNK 1442
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 261 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
++S+LD+++GCG +S G+ SG+ T+WAI+ + A ++ K NHP V
Sbjct: 1034 KLSMLDIFAGCGGLSEGI----HQSGIA-STKWAIEYDHAAAEAFKMNHPTATV 1082
>gi|255553977|ref|XP_002518029.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
gi|223543011|gb|EEF44547.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
Length = 1542
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 127/357 (35%), Positives = 181/357 (50%), Gaps = 49/357 (13%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LPLPG VDFI GGPPCQG SG NRF Q+ ++ +L F+ +Y +PKY L+E
Sbjct: 1194 NDLPLPGQVDFINGGPPCQGFSGMNRF--SQSTWSKVQCEMILAFLSFADYFRPKYFLLE 1251
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ G R A+ L+ M YQ R GI+ AG+YG+ R R F+W A P + LP+
Sbjct: 1252 NVRNFVSFNKGQTFRLALASLLEMGYQVRFGILEAGAYGVSHSRKRAFIWAASPEEVLPE 1311
Query: 558 YPLPTHEIVA----RGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
+P P H A + N + + AN P + + + D I DLP+V N S
Sbjct: 1312 WPEPMHVFSAPELKISLSGNSHYAAVRSTANGAPF---RAITVRDTIGDLPVVGNGASAT 1368
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
+Y + FQK I R ++V L+ DH ++N + R IPKR
Sbjct: 1369 NMEYKNDPVSWFQKRI---RGNMVTLT------------DHISKEMNELNLIRCQKIPKR 1413
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFG 727
GA++RDLP E+V L +G+ + +P+ A + H FG
Sbjct: 1414 PGADWRDLPD---------------EKVKLSTGQLVDLIPWCLPNTAKR--HNQWKGLFG 1456
Query: 728 RLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
RL W+ T +T QP ++ HP QDR+LT+RE AR QGF D Y+ G ++ +
Sbjct: 1457 RLDWEGNFPTSITDPQPMGKVGMCFHPEQDRILTVRECARSQGFRDSYKFAGNIQHK 1513
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 262 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
++ LD++SGCG +S GL +GV T+WAI+ A ++ K NHPE+ V
Sbjct: 1106 LATLDIFSGCGGLSEGL----QQAGVS-STKWAIEYEEPAGEAFKLNHPESLV 1153
>gi|302786012|ref|XP_002974777.1| hypothetical protein SELMODRAFT_232368 [Selaginella moellendorffii]
gi|300157672|gb|EFJ24297.1| hypothetical protein SELMODRAFT_232368 [Selaginella moellendorffii]
Length = 1335
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 126/354 (35%), Positives = 179/354 (50%), Gaps = 47/354 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRF--RNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
LP PG+VDFI GGPPCQG SG NRF RN I+ +L F+ +Y +P+Y L+E
Sbjct: 989 LPRPGEVDFISGGPPCQGFSGMNRFNKRN----WSKIQCEMVLGFLSYADYFRPRYFLLE 1044
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ G R + L+ M YQ R GI+ AG YG+ Q R R +W A P + LP
Sbjct: 1045 NVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILQAGHYGISQSRTRAIIWAAAPDEVLPD 1104
Query: 558 YPLPTHEIV-ARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERK 616
+P P H A+ IP + A + + + + + D I DLP V N + E
Sbjct: 1105 WPEPVHVFASAQLKIPLSGNSVYAAADDTRGGAPLRSITVRDTIGDLPPVANGTEKPETP 1164
Query: 617 YGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGA 676
YG ++ FQK IR ++L DH ++N ++ R IPKR GA
Sbjct: 1165 YGNEPQSWFQKNIR---------------GGATVLRDHICKEMNELNFIRCQRIPKRPGA 1209
Query: 677 NFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRLW 730
++RDLP E+V L +G+ + +P+ A + H FGRL
Sbjct: 1210 DWRDLPD---------------EKVKLSTGQTVDLIPWCLPNTAER--HNQWKGLFGRLD 1252
Query: 731 WDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
WD T +T QP ++ HP QDR++T+RE AR QGFPD Y+ FG ++ +
Sbjct: 1253 WDGNFPTSITDPQPMGKVGMCFHPEQDRIVTVRECARSQGFPDSYKFFGTMQNK 1306
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 261 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
++S+LD+++GCG +S G+ SG+ T+WAI+ + A ++ K NHP V
Sbjct: 898 KLSMLDIFAGCGGLSEGI----HQSGIA-STKWAIEYDHAAAEAFKMNHPTATV 946
>gi|297800866|ref|XP_002868317.1| hypothetical protein ARALYDRAFT_355413 [Arabidopsis lyrata subsp.
lyrata]
gi|297314153|gb|EFH44576.1| hypothetical protein ARALYDRAFT_355413 [Arabidopsis lyrata subsp.
lyrata]
Length = 1506
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 130/355 (36%), Positives = 184/355 (51%), Gaps = 41/355 (11%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
+ + LPLPG VDFI GGPPCQG SG NRF + + ++ +L F+ +Y +PKY L
Sbjct: 1151 QKSTLPLPGQVDFINGGPPCQGFSGMNRFSD--RSWSKVQCEMILAFLSFADYFRPKYFL 1208
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV I+ F+ G + + L+ M YQ R G++ AG+YG+ Q R R F+W A P + L
Sbjct: 1209 LENVKKIVSFNNGQTFQLTIASLLEMGYQVRFGLLEAGAYGISQPRKRAFIWAAAPNEVL 1268
Query: 556 PQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLE-KGVLLSDAISDLPLVTNNESEDE 614
P++P P H G + + + A +N + + + D I DLP V N ESE
Sbjct: 1269 PEWPEPMHVFNNPGFKISLSRGLHCAAVHNTKSGAPFRSITVRDTIGDLPPVENGESEIN 1328
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
+KY V + FQK +M ++L DH Q+N + R +PKR
Sbjct: 1329 KKYKDVPVSWFQK---------------EMRGNMTVLTDHICKQMNELNLIRCKKVPKRP 1373
Query: 675 GANFRDLPGVLVGPDNKVRWDPSMERVMLKSG--KPLVPDYAM--KFEHQSSTKP-FGRL 729
GA++RDLP E V+L +G + LVP +AM K Q+ K +GRL
Sbjct: 1374 GASWRDLPD---------------ENVILSNGLVEKLVP-FAMSNKANEQNRYKGLYGRL 1417
Query: 730 WWDEIVNTVVTRAQPHN--RILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
W T +T QP + HP QDR++TIRE AR QGFPD Y+ G K++
Sbjct: 1418 DWQGNFPTSITDPQPMGFVGVCFHPDQDRIITIRECARSQGFPDSYEFSGKKKDK 1472
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 83/175 (47%), Gaps = 21/175 (12%)
Query: 153 RWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQ---K 209
R FYR ED ++ A D + V+ S P + I K ++ + T+M L +
Sbjct: 946 RRFYRPEDISVEK-AYASDIQEVYYSKDTYVLPPDAIKGKCEVRK-KTDMPLCREYPVLD 1003
Query: 210 NIPPCDLYYDMK----YTLPH---LTFLNINNESNRRDSDASSTISSETGSNSPIGQPE- 261
+I C+L+YD LP L F I ++ R+ + SET S P P+
Sbjct: 1004 HIFFCELFYDSSNGYLKQLPSNMKLKFSTIKDDKLLREKKGKG-VESETDSVKPDEAPKE 1062
Query: 262 --MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
++ LD+++GCG +S GL +GV T+WAI+ A ++ K NHP+ V
Sbjct: 1063 MRLATLDIFAGCGGLSYGL----EKAGVS-DTKWAIEYEEPAAQAFKQNHPDATV 1112
>gi|233770210|gb|ACQ91178.1| Met1-type cytosine DNA-methyltransferase [Fragaria x ananassa]
Length = 1565
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/350 (35%), Positives = 179/350 (51%), Gaps = 49/350 (14%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LPLPG VDFI GGPPCQG SG NRF + ++ +L F+ +Y +PKY L+ENV
Sbjct: 1214 LPLPGQVDFINGGPPCQGFSGMNRFNT--STWSKVQCEMILAFLSFADYFRPKYFLLENV 1271
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R + L+ M YQ R GI+ AG+YG+ Q R R F+W A P + LP++P
Sbjct: 1272 RNFVAFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAAAPDEILPEWP 1331
Query: 560 LPTHEI----VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H + + N + + + A+ P + + + D I DLP V N S+
Sbjct: 1332 EPMHVFGVPELKINLSSNSYYAAVRSTASGAPF---RPITVRDTIGDLPAVGNGASKVNM 1388
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+Y + + FQK IR MA +L DH ++N + R IPKR G
Sbjct: 1389 EYESDPVSWFQKKIR-----------GNMA----VLTDHISKEMNELNLIRCKRIPKRPG 1433
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRL 729
A+++DLP E+V L +G+ + +P+ A + H FGRL
Sbjct: 1434 ADWKDLP---------------EEKVKLSTGQLVDLIPWCLPNTAKR--HNQWKGLFGRL 1476
Query: 730 WWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFG 777
W+ T +T QP ++ HP QDR++T+RE AR QGFPD YQ +G
Sbjct: 1477 DWEGNFPTSITDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDSYQFYG 1526
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 25/180 (13%)
Query: 151 KARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLE----- 205
K R F+R ED ++ C D + V+ S+ P++ I K EV DL
Sbjct: 1001 KVRRFFRPEDISVEKAYC-SDVREVYYSEELHILPVDSIEGKC---EVRRRSDLPECNAP 1056
Query: 206 AKQKNIPPCDLYYD-MKYTLPHL--------TFLNINNESNRRDSDASSTISSETGSNSP 256
A ++I C+ YD +L L + + + ES +R
Sbjct: 1057 ALFQHIFFCEHLYDPSNGSLKQLPANIRVKYSTVGGDTESRKRKGKCKEGEDVPEVEQQR 1116
Query: 257 IGQPEMSL--LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
+ M L LD+++GCG +S GL +GV +T+WAI+ A ++ + NHPE+KV
Sbjct: 1117 VDSEHMRLATLDIFAGCGGLSEGL----HQAGVS-ITKWAIEYEEPAGQAFQLNHPESKV 1171
>gi|233770212|gb|ACQ91179.1| Met1-type cytosine DNA-methyltransferase [Fragaria x ananassa]
Length = 1557
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/350 (35%), Positives = 179/350 (51%), Gaps = 49/350 (14%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LPLPG VDFI GGPPCQG SG NRF + ++ +L F+ +Y +PKY L+ENV
Sbjct: 1206 LPLPGQVDFINGGPPCQGFSGMNRFNT--STWSKVQCEMILAFLSFADYFRPKYFLLENV 1263
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R + L+ M YQ R GI+ AG+YG+ Q R R F+W A P + LP++P
Sbjct: 1264 RNFVAFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAAAPDEILPEWP 1323
Query: 560 LPTHEI----VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H + + N + + + A+ P + + + D I DLP V N S+
Sbjct: 1324 EPMHVFGVPELKINLSSNSYYAAVRSTASGAPF---RPITVRDTIGDLPAVGNGASKVNI 1380
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+Y + + FQK IR MA +L DH ++N + R IPKR G
Sbjct: 1381 EYESDPVSWFQKKIR-----------GNMA----VLTDHISKEMNELNLIRCKRIPKRPG 1425
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRL 729
A+++DLP E+V L +G+ + +P+ A + H FGRL
Sbjct: 1426 ADWKDLP---------------EEKVKLSTGQLVDLIPWCLPNTAKR--HNQWKGLFGRL 1468
Query: 730 WWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFG 777
W+ T +T QP ++ HP QDR++T+RE AR QGFPD YQ +G
Sbjct: 1469 DWEGNFPTSITDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDSYQFYG 1518
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 25/180 (13%)
Query: 151 KARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLE----- 205
K R F+R ED ++ C D + V+ S+ P++ I K EV DL
Sbjct: 993 KVRRFFRPEDISVEKAYC-SDVREVYYSEELHILPVDSIEGKC---EVRRRSDLPECNAP 1048
Query: 206 AKQKNIPPCDLYYD-MKYTLPHL--------TFLNINNESNRRDSDASSTISSETGSNSP 256
A ++I C+ YD +L L + + + ES +R
Sbjct: 1049 ALFQHIFFCEHLYDPSNGSLKQLPANIRVKYSTVGGDTESRKRKGKCKEGEDVPEVEQQR 1108
Query: 257 IGQPEMSL--LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
+ M L LD+++GCG +S GL +GV +T+WAI+ A ++ + NHPE+KV
Sbjct: 1109 VDSEHMRLATLDIFAGCGGLSEGL----HQAGVS-ITKWAIEYEEPAGQAFQLNHPESKV 1163
>gi|357498929|ref|XP_003619753.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355494768|gb|AES75971.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 1573
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 177/352 (50%), Gaps = 49/352 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LPLPG VDFI GGPPCQG SG NRF + ++ +L F+ +Y +P+Y L+ENV
Sbjct: 1226 LPLPGQVDFINGGPPCQGFSGMNRFNT--STWSKVQCEMILAFLSFADYFRPRYFLLENV 1283
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R + L+ M YQ R GI+ AG++G+ Q R R F+W A P LP++P
Sbjct: 1284 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPEDVLPEWP 1343
Query: 560 LPTHEIVA---RGVIPNEFQEIIV-AYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H A + + Q V + AN P + + + D I +LP+V N S
Sbjct: 1344 EPMHVFSAPELKITLSENVQYAAVRSTANGAPL---RAITVRDTIGELPVVGNGASRTNM 1400
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+Y + + FQK IR MA +L DH ++N + R IPKR G
Sbjct: 1401 EYQSDPVSWFQKKIR-----------GNMA----VLTDHISKEMNELNLIRCQKIPKRPG 1445
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRL 729
++RDLP E++ L SG+ + +P+ A + H FGRL
Sbjct: 1446 CDWRDLP---------------EEKIKLSSGQLVDLIPWCLPNTAKR--HNQWKGLFGRL 1488
Query: 730 WWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
W T +T QP ++ HP QDR+LT+RE AR QGFPD YQ +G +
Sbjct: 1489 DWQGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDRYQFYGNI 1540
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 100/265 (37%), Gaps = 59/265 (22%)
Query: 95 EEEEVLQARCHYTQASVDGCLYNLGDDAYV-------KAEEGA----------VDYIARI 137
EE++V + + ++G Y+L D YV K E+G I ++
Sbjct: 933 EEKDVFKINSSKSSFVLEGTEYSLNDYVYVSPFEFEEKIEQGTHKSGRNVGLRAYVICQV 992
Query: 138 VELFESVDGEPY------FKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVS 191
+E+ + + K R F+R ED + C D + V+ SD C +S
Sbjct: 993 LEIIAKKETKQAEIKSTDIKVRRFFRPEDVSSEKAYC-SDVQEVYYSDEA------CTIS 1045
Query: 192 KAKI---AEVATNMDLE-----AKQKNIPPCDLYYD--------------MKYTLPHLTF 229
I EV +D+ NI C+L YD +KY+ H
Sbjct: 1046 VQSIEGKCEVRKKIDVPEGCAPGIFHNIFFCELLYDPATGALKKLPAHIKVKYSTGHTA- 1104
Query: 230 LNINNESNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKL 289
+ + IS + ++ LD+++GCG +S GL SGV
Sbjct: 1105 -DAAARKKKGKCKEGDNISEPDPERKTSNEKRLATLDIFAGCGGLSEGL----HQSGVS- 1158
Query: 290 VTRWAIDINPHACKSLKFNHPETKV 314
T+WAI+ A + K NHPE V
Sbjct: 1159 STKWAIEYEEPAGNAFKANHPEALV 1183
>gi|75233438|sp|Q7Y1I7.1|DNM1A_ORYSJ RecName: Full=DNA (cytosine-5)-methyltransferase 1A; Short=OsMET1a;
AltName: Full=DNA methyltransferase 1-1; Short=OsMET1-1
gi|31126751|gb|AAP44671.1| putative DNA (cytosine-5-)-methyltransferase [Oryza sativa Japonica
Group]
gi|171196101|dbj|BAG15928.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
gi|222625970|gb|EEE60102.1| hypothetical protein OsJ_12965 [Oryza sativa Japonica Group]
Length = 1527
Score = 202 bits (513), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 184/355 (51%), Gaps = 49/355 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP+PG+V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +P++ L+ENV
Sbjct: 1182 LPVPGEVEFINGGPPCQGFSGMNRFN--QSPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1239
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R + L+ M YQ R GI+ AG+YG+ Q R R F+W A P + LP++P
Sbjct: 1240 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKRAFIWAAAPGETLPEWP 1299
Query: 560 LPTHEIVA---RGVIPN-EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H + + +P+ +F + + A P + + + D I DLP V N +
Sbjct: 1300 EPMHVFASPELKITLPDGKFYAAVKSTAAGAPF---RSITVRDTIGDLPAVENGAGKPTI 1356
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+YG+ + FQK IR + MAS L DH ++N + R IPKR G
Sbjct: 1357 QYGSGPVSWFQKKIR-----------SDMAS----LNDHISKEMNELNLIRCKHIPKRPG 1401
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRL 729
++ DLP E+V L +G+ + +P+ A + H +GRL
Sbjct: 1402 CDWHDLPD---------------EKVKLSTGQMVDLIPWCLPNTAKR--HNQWKGLYGRL 1444
Query: 730 WWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
W+ T VT QP ++ HP QDR++T+RE AR QGFPD Y+ G ++ +
Sbjct: 1445 DWEGNFPTSVTDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYRFAGNIQNK 1499
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 18/188 (9%)
Query: 151 KARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSK--AKIAEVATNMDLEAKQ 208
K R FYR +D + A D + V+ S+ P+ I K ++ + N DL A
Sbjct: 970 KVRRFYRPDD-ISSTKAYSSDIREVYYSEDIISVPVVMIEGKCEVRLKDDLPNSDLPAVV 1028
Query: 209 KNIPPCDLYYD-----MKYTLPHLTFLNINNE--SNRRDSDASSTISSETGSNSPI-GQP 260
+++ C+ YD +K P++ + + + +++++ GS+ P GQ
Sbjct: 1029 EHVFCCEYLYDPANGALKQLPPNVRLVTLTRKVPASKKNKGKQICDIELGGSDKPKDGQS 1088
Query: 261 E--MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEA 318
E ++ LD+++GCG +S GL SG+ L T+WAI+ A + NHPE V E
Sbjct: 1089 ENCLATLDIFAGCGGLSEGL----QRSGLSL-TKWAIEYEEPAGDAFGENHPEAAVFVEN 1143
Query: 319 ADDFLSLL 326
+ L +
Sbjct: 1144 CNVILKAI 1151
>gi|218193912|gb|EEC76339.1| hypothetical protein OsI_13909 [Oryza sativa Indica Group]
Length = 1527
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 184/355 (51%), Gaps = 49/355 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP+PG+V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +P++ L+ENV
Sbjct: 1182 LPVPGEVEFINGGPPCQGFSGMNRFN--QSPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1239
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R + L+ M YQ R GI+ AG+YG+ Q R R F+W A P + LP++P
Sbjct: 1240 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKRAFIWAAAPGETLPEWP 1299
Query: 560 LPTHEIVA---RGVIPN-EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H + + +P+ +F + + A P + + + D I DLP V N +
Sbjct: 1300 EPMHVFASPELKITLPDGKFYAAVKSTAAGAPF---RSITVRDTIGDLPAVENGAGKPTI 1356
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+YG+ + FQK IR + MAS L DH ++N + R IPKR G
Sbjct: 1357 QYGSGPVSWFQKKIR-----------SDMAS----LNDHISKEMNELNLIRCKHIPKRPG 1401
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRL 729
++ DLP E+V L +G+ + +P+ A + H +GRL
Sbjct: 1402 CDWHDLPD---------------EKVKLSTGQMVDLIPWCLPNTAKR--HNQWKGLYGRL 1444
Query: 730 WWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
W+ T VT QP ++ HP QDR++T+RE AR QGFPD Y+ G ++ +
Sbjct: 1445 DWEGNFPTSVTDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYRFAGNIQNK 1499
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 18/188 (9%)
Query: 151 KARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSK--AKIAEVATNMDLEAKQ 208
K R FYR +D + A D + V+ S+ P+ I K ++ + N DL A
Sbjct: 970 KVRRFYRPDD-ISSTKAYSSDIREVYYSEDIISVPVVMIEGKCEVRLKDDLPNSDLPAVV 1028
Query: 209 KNIPPCDLYYD-----MKYTLPHLTFLNINNE--SNRRDSDASSTISSETGSNSPI-GQP 260
+++ C+ YD +K P++ + + + +++++ GS+ P GQ
Sbjct: 1029 EHVFCCEYLYDPANGALKQLPPNVRLVTLTRKVPASKKNKGKQICDIELGGSDKPKDGQS 1088
Query: 261 E--MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEA 318
E ++ LD+++GCG +S GL SG+ L T+WAI+ A + NHPE V E
Sbjct: 1089 ENCLATLDIFAGCGGLSEGL----QRSGLSL-TKWAIEYEEPAGDAFGENHPEAAVFVEN 1143
Query: 319 ADDFLSLL 326
+ L +
Sbjct: 1144 CNVILKAI 1151
>gi|18653391|gb|AAL77415.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
Length = 1522
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 184/355 (51%), Gaps = 49/355 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP+PG+V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +P++ L+ENV
Sbjct: 1177 LPVPGEVEFINGGPPCQGFSGMNRFN--QSPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1234
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R + L+ M YQ R GI+ AG+YG+ Q R R F+W A P + LP++P
Sbjct: 1235 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKRAFIWAAAPGETLPEWP 1294
Query: 560 LPTHEIVA---RGVIPN-EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H + + +P+ +F + + A P + + + D I DLP V N +
Sbjct: 1295 EPMHVFASPELKITLPDGKFYAAVKSTAAGAPF---RSITVRDTIGDLPAVENGAGKPTI 1351
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+YG+ + FQK IR + MAS L DH ++N + R IPKR G
Sbjct: 1352 QYGSGPVSWFQKKIR-----------SDMAS----LNDHISKEMNELNLIRCKHIPKRPG 1396
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRL 729
++ DLP E+V L +G+ + +P+ A + H +GRL
Sbjct: 1397 CDWHDLPD---------------EKVKLSTGQMVDLIPWCLPNTAKR--HNQWKGLYGRL 1439
Query: 730 WWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
W+ T VT QP ++ HP QDR++T+RE AR QGFPD Y+ G ++ +
Sbjct: 1440 DWEGNFPTSVTDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYRFAGNIQNK 1494
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 18/188 (9%)
Query: 151 KARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKA--KIAEVATNMDLEAKQ 208
K R FYR +D + A D + V+ S+ P+ I K ++ + N DL A
Sbjct: 965 KVRRFYRPDD-ISSTKAYSSDIREVYYSEDIISVPVVMIEGKCEVRLKDDLPNSDLPAVV 1023
Query: 209 KNIPPCDLYYD-----MKYTLPHLTFLNINNE--SNRRDSDASSTISSETGSNSPI-GQP 260
+++ C+ YD +K P++ + + + +++++ GS+ P GQ
Sbjct: 1024 EHVFCCEYLYDPANGALKQLPPNVRLVTLTRKVPASKKNKGKQICDIELGGSDKPKDGQS 1083
Query: 261 E--MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEA 318
E ++ LD+++GCG +S GL SG+ L T+WAI+ A + NHPE V E
Sbjct: 1084 ENCLATLDIFAGCGGLSEGL----QRSGLSL-TKWAIEYEEPAGDAFGENHPEAAVFVEN 1138
Query: 319 ADDFLSLL 326
+ L +
Sbjct: 1139 CNVILKAI 1146
>gi|15236413|ref|NP_193150.1| DNA methyltransferase 2 [Arabidopsis thaliana]
gi|2244770|emb|CAB10193.1| (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|7268119|emb|CAB78456.1| (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|332657979|gb|AEE83379.1| DNA methyltransferase 2 [Arabidopsis thaliana]
Length = 1519
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/356 (34%), Positives = 179/356 (50%), Gaps = 43/356 (12%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
+ + LPLPG VDFI GGPPCQG SG NRF + + ++ +L F+ +Y +PKY L
Sbjct: 1164 QKSTLPLPGQVDFINGGPPCQGFSGMNRFSH--GSWSKVQCEMILAFLSFADYFRPKYFL 1221
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + ++ G + + L+ M YQ R GI+ AG+YG+ Q R RV +W A P + L
Sbjct: 1222 LENVKKFVTYNKGRTFQLTMASLLEMGYQVRFGILEAGTYGVSQPRKRVIIWAASPEEVL 1281
Query: 556 PQYPLPTHEIVARGVIPNEFQEIIV-------AYANNQPCQLEKGVLLSDAISDLPLVTN 608
P++P P H V N +I + A N + + + + D I DLP V N
Sbjct: 1282 PEWPEPMH------VFDNPGSKISLPRGLRYDAGCNTKFGAPFRSITVRDTIGDLPPVEN 1335
Query: 609 NESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVC 668
ES+ ++YGT + FQK IR S+L DH +N + R
Sbjct: 1336 GESKINKEYGTTPASWFQKKIR---------------GNMSVLTDHICKGLNELNLIRCK 1380
Query: 669 CIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGR 728
IPKR GA++RDL PD V ++ +++ +PL K H +GR
Sbjct: 1381 KIPKRPGADWRDL------PDENV----TLSNGLVEKLRPLALSKTAK-NHNEWKGLYGR 1429
Query: 729 LWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
L W + +T QP ++ HP QDR++T+RE AR QGFPD Y+ G K +
Sbjct: 1430 LDWQGNLPISITDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYEFSGTTKHK 1485
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 25/117 (21%)
Query: 214 CDLYYDMKY----TLP---HLTFLNINNESNRRDSDASSTISSETGSNS---------PI 257
C+++YD P L F I +E+ R+ ETG++S P
Sbjct: 1018 CEVFYDSSTGYLKQFPANMKLKFSTIKDETLLREKKGKGV---ETGTSSGMLMKPDEVPK 1074
Query: 258 GQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
+P ++ LD+++GCG +S GL +GV T+WAI+ A + K NHPE V
Sbjct: 1075 EKP-LATLDIFAGCGGLSHGL----ENAGVS-TTKWAIEYEEPAGHAFKQNHPEATV 1125
>gi|6523846|gb|AAF14882.1|AF138283_1 cytosine-5 methyltransferase [Arabidopsis thaliana]
Length = 1517
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/356 (34%), Positives = 179/356 (50%), Gaps = 43/356 (12%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
+ + LPLPG VDFI GGPPCQG SG NRF + + ++ +L F+ +Y +PKY L
Sbjct: 1162 QKSTLPLPGQVDFINGGPPCQGFSGMNRFSH--GSWSKVQCEMILAFLSFADYFRPKYFL 1219
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + ++ G + + L+ M YQ R GI+ AG+YG+ Q R RV +W A P + L
Sbjct: 1220 LENVKKFVTYNKGRTFQLTMASLLEMGYQVRFGILEAGTYGVSQPRKRVIIWAASPEEVL 1279
Query: 556 PQYPLPTHEIVARGVIPNEFQEIIV-------AYANNQPCQLEKGVLLSDAISDLPLVTN 608
P++P P H V N +I + A N + + + + D I DLP V N
Sbjct: 1280 PEWPEPMH------VFDNPGSKISLPRGLRYDAGCNTKFGAPFRSITVRDTIGDLPPVEN 1333
Query: 609 NESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVC 668
ES+ ++YGT + FQK IR S+L DH +N + R
Sbjct: 1334 GESKINKEYGTTPASWFQKKIR---------------GNMSVLTDHICKGLNELNLIRCK 1378
Query: 669 CIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGR 728
IPKR GA++RDL PD V ++ +++ +PL K H +GR
Sbjct: 1379 KIPKRPGADWRDL------PDENV----TLSNGLVEKLRPLALSKTAK-NHNEWKGLYGR 1427
Query: 729 LWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
L W + +T QP ++ HP QDR++T+RE AR QGFPD Y+ G K +
Sbjct: 1428 LDWQGNLPISITDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYEFSGTTKHK 1483
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 25/117 (21%)
Query: 214 CDLYYDMKY----TLP---HLTFLNINNESNRRDSDASSTISSETGSNS---------PI 257
C+++YD P L F I +E+ R+ ETG++S P
Sbjct: 1016 CEVFYDSSTGYLKQFPANMKLKFSTIKDETLLREKKGKGV---ETGTSSGMLMKPDEVPK 1072
Query: 258 GQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
+P ++ LD+++GCG +S GL +GV T+WAI+ A + K NHPE V
Sbjct: 1073 EKP-LATLDIFAGCGGLSHGL----ENAGVS-TTKWAIEYEEPAGHAFKQNHPEATV 1123
>gi|334186509|ref|NP_001190725.1| DNA methyltransferase 2 [Arabidopsis thaliana]
gi|332657980|gb|AEE83380.1| DNA methyltransferase 2 [Arabidopsis thaliana]
Length = 1545
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/356 (34%), Positives = 179/356 (50%), Gaps = 43/356 (12%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
+ + LPLPG VDFI GGPPCQG SG NRF + + ++ +L F+ +Y +PKY L
Sbjct: 1190 QKSTLPLPGQVDFINGGPPCQGFSGMNRFSH--GSWSKVQCEMILAFLSFADYFRPKYFL 1247
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + ++ G + + L+ M YQ R GI+ AG+YG+ Q R RV +W A P + L
Sbjct: 1248 LENVKKFVTYNKGRTFQLTMASLLEMGYQVRFGILEAGTYGVSQPRKRVIIWAASPEEVL 1307
Query: 556 PQYPLPTHEIVARGVIPNEFQEIIV-------AYANNQPCQLEKGVLLSDAISDLPLVTN 608
P++P P H V N +I + A N + + + + D I DLP V N
Sbjct: 1308 PEWPEPMH------VFDNPGSKISLPRGLRYDAGCNTKFGAPFRSITVRDTIGDLPPVEN 1361
Query: 609 NESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVC 668
ES+ ++YGT + FQK IR S+L DH +N + R
Sbjct: 1362 GESKINKEYGTTPASWFQKKIR---------------GNMSVLTDHICKGLNELNLIRCK 1406
Query: 669 CIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGR 728
IPKR GA++RDL PD V ++ +++ +PL K H +GR
Sbjct: 1407 KIPKRPGADWRDL------PDENV----TLSNGLVEKLRPLALSKTAK-NHNEWKGLYGR 1455
Query: 729 LWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
L W + +T QP ++ HP QDR++T+RE AR QGFPD Y+ G K +
Sbjct: 1456 LDWQGNLPISITDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYEFSGTTKHK 1511
>gi|411012963|gb|AFV99138.1| MET-type cytosine DNA-methyltransferase 1 [Malus x domestica]
Length = 1570
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/354 (35%), Positives = 179/354 (50%), Gaps = 49/354 (13%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LPLPG VDFI GGPPCQG SG NRF Q+ ++ +L F+ +Y +PKY L+E
Sbjct: 1219 NDLPLPGQVDFINGGPPCQGFSGMNRFN--QSTWSKVQCEMILAFLSFADYFRPKYFLLE 1276
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ G R V L+ M YQ R GI+ AG+YG+ Q R R F+W A P + LP+
Sbjct: 1277 NVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAAAPDENLPE 1336
Query: 558 YPLPTHEI----VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
+P P H + + N + + + A P + + + D I DLP V N S+
Sbjct: 1337 WPEPMHVFGVPELKISLSGNSYYSAVRSTAGGAPF---RSITVRDTIGDLPAVGNGASKV 1393
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
+Y + + FQK IR +MA +L +H ++N + R IPKR
Sbjct: 1394 NLEYESDPISWFQKKIR-----------GEMA----VLTEHISKEMNELNLIRCQRIPKR 1438
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFG 727
GA+++ LP E+V L +G+ + +P+ A + H FG
Sbjct: 1439 PGADWQCLPD---------------EKVKLSTGQIVDLIPWCLPNTAKR--HNQWKGLFG 1481
Query: 728 RLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
RL W+ T +T QP ++ HP QDR+LT+RE AR QGF D YQ G +
Sbjct: 1482 RLDWEGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFRDSYQFSGNI 1535
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 259 QPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
Q ++ LD+++GCG +S GL +G+ L T+WAI+ A + K NHPE+ V
Sbjct: 1128 QKRLATLDIFAGCGGLSEGL----RQAGISL-TKWAIEYEEPAGDAFKLNHPESLV 1178
>gi|261414302|gb|ACX83569.1| DNA methyltransferase [Hieracium piloselloides]
Length = 1547
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/353 (35%), Positives = 176/353 (49%), Gaps = 45/353 (12%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP PG VDFI GGPPCQG SG NRF Q+ ++ +L F+ EY +PKY L+ENV
Sbjct: 1197 LPRPGQVDFINGGPPCQGFSGMNRFN--QSTWSKVQCEMILAFLSFAEYFRPKYFLLENV 1254
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R A+ L+ M YQ R GI+ AG++G+ Q R R F+W A P + LP++P
Sbjct: 1255 RNFVSFNKGQTFRLALASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPEEILPEWP 1314
Query: 560 LPTHEIVA--RGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKY 617
P H + V N + A + + + + D I DLP V N S +Y
Sbjct: 1315 EPMHVFASPELRVSLNGNSQYAAARSTASGAPF-RAITVRDTIGDLPPVGNGASNPTIEY 1373
Query: 618 GTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGAN 677
+ FQK IR S+L DH ++N + R IPKR GA+
Sbjct: 1374 KNEPVSWFQKRIR---------------GDTSVLTDHISKEMNELNVIRCQRIPKRPGAD 1418
Query: 678 FRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRLWW 731
+RDLP E+V L +G+ + +P+ A + H FGRL W
Sbjct: 1419 WRDLP---------------EEKVKLSTGQMVDLIPWCLPNTAKR--HNQWKGLFGRLDW 1461
Query: 732 DEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+ T +T QP ++ HP QDR+LT+RE AR QGFPD Y+ G ++ +
Sbjct: 1462 EGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDGYKFSGNIQHK 1514
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 7/52 (13%)
Query: 262 MSLLDLYSGCGAMSTGLC-IGASLSGVKLVTRWAIDINPHACKSLKFNHPET 312
+ LD+++GCG +S GL GAS VT+WAI+ A + + NHPE
Sbjct: 1107 LKTLDIFAGCGGLSEGLTKAGAS------VTKWAIEYEEPAGDAFRLNHPEA 1152
>gi|2654108|gb|AAC49931.1| cytosine-5 DNA methyltransferase [Pisum sativum]
Length = 1554
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 175/354 (49%), Gaps = 49/354 (13%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LPLPG VDFI GGPPCQG SG NRF + ++ +L F+ +Y +P+Y L+E
Sbjct: 1205 NSLPLPGQVDFINGGPPCQGFSGMNRFNT--STWSKVQCEMILAFLSFADYFRPRYFLLE 1262
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ G R + L+ M YQ R GI+ AG++G+ Q R R F+W A P LP+
Sbjct: 1263 NVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPEDVLPE 1322
Query: 558 YPLPTHEIVA---RGVIPNEFQ-EIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
+P P H A + + Q + + AN P + + + D I +LP V N S
Sbjct: 1323 WPEPMHVFSAPELKITLAENVQYAAVCSTANGAPL---RAITVRDTIGELPAVGNGASRT 1379
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
+Y + + FQK IR MA +L DH ++N + R IPKR
Sbjct: 1380 NMEYQSDPISWFQKKIR-----------GNMA----VLTDHISKEMNELNLIRCQKIPKR 1424
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFG 727
G ++RDLP E++ L +G+ + +P A + H FG
Sbjct: 1425 PGCDWRDLPD---------------EKIKLSTGQLVDLIPWCLPHTAKR--HNQWKGLFG 1467
Query: 728 RLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
RL W T +T QP ++ HP QDR+LT+RE AR QGFPD YQ G +
Sbjct: 1468 RLDWQGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDHYQFSGNI 1521
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 102/261 (39%), Gaps = 49/261 (18%)
Query: 94 NEEEEVLQARCHYTQASVDGCLYNLGDDAYV-------KAEEGA-------------VDY 133
++ +E+ + + +DG Y+L D YV K E+G V
Sbjct: 913 DKAKEIFKVNSSKSSFVLDGTEYSLNDYVYVSPFEFEEKIEQGTHKSGRNVGLKAFVVCQ 972
Query: 134 IARIVELFESVDGE---PYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIV 190
+ I+ E+ E K R F+R ED + C D + V+ SD + +
Sbjct: 973 VLEIIAKKETKQAEIKSTELKVRRFFRPEDVSSEKAYC-SDVQEVYFSDETYTISVQSVE 1031
Query: 191 SKAKIAEVATNMDLEAKQ-----KNIPPCDLYYD-MKYTLPHL-TFLNINNESNRRDSDA 243
K EV +D+ N+ C+L YD +L L + + + S +A
Sbjct: 1032 GKC---EVRKKIDIPEGSAPGAFHNVFFCELLYDPATGSLKKLPSHIKVKYSSGPTADNA 1088
Query: 244 SSTISSETGSNSPIGQPE----------MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRW 293
+ + I P+ ++ LD+++GCGA+S GL + S T+W
Sbjct: 1089 ARKKKGKCKEGDSISVPDIKSKTSNENRLATLDIFAGCGALSEGLHKSGASS-----TKW 1143
Query: 294 AIDINPHACKSLKFNHPETKV 314
AI+ A + K NHPE V
Sbjct: 1144 AIEYEEPAGNAFKANHPEALV 1164
>gi|359480931|ref|XP_002267284.2| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Vitis
vinifera]
Length = 1530
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/357 (34%), Positives = 179/357 (50%), Gaps = 49/357 (13%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LPLPG VDFI GGPPCQG SG NRF Q+ ++ +L F+ +Y +P++ L+E
Sbjct: 1185 NNLPLPGQVDFINGGPPCQGFSGMNRFN--QSTWSKVQCEMILAFLSFADYFRPRFFLLE 1242
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ G R V L+ M YQ R GI+ AG+YG+ Q R RVF+W A P + LP+
Sbjct: 1243 NVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGAYGVSQSRKRVFIWAASPEETLPE 1302
Query: 558 YPLPTHEIVA---RGVIPNEFQEIIV-AYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
+P P H + + Q V + A P + + + D I DLP VTN S+
Sbjct: 1303 WPEPMHVFAVPELKITLSKNMQYAAVRSTATGAPF---RAITVRDTIGDLPAVTNGASKT 1359
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
+Y + FQK IR +L DH ++N + R IPK+
Sbjct: 1360 GLEYQNGPVSWFQKKIR---------------GNMMVLTDHISKEMNELNLIRCQKIPKQ 1404
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFG 727
GA++R LP E+V L +G+ + +P+ A + H FG
Sbjct: 1405 PGADWRSLPD---------------EKVALSTGQVVDLIPWCLPNTAKR--HNQWKGLFG 1447
Query: 728 RLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
RL W+ T +T QP ++ HP QDR++++RE AR QGFPD Y+ G ++ +
Sbjct: 1448 RLDWEGNFPTSITDPQPMGKVGMCFHPDQDRLVSVRECARSQGFPDSYKFSGNIQHK 1504
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 25/181 (13%)
Query: 151 KARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAT--NMDLEAKQ 208
K R F+R ED + + A D + VF S+ P+ I K ++ + + D+ A
Sbjct: 972 KLRRFFRPED-ISAEKAYTSDIREVFYSEETHFVPVEMIEGKCEVIQKHDLPSCDVLATF 1030
Query: 209 KNIPPCD-LYYDMKYTLPHLTFLNINNESNRRDSDASSTISSETGSNSPIGQPEMSL--- 264
++I C+ L+ K +L L S R+ D ++T + +G+ ++ +
Sbjct: 1031 EHIFFCEHLFEPSKGSLKQLPVHIKMRYSARKAVDDAAT--RKRKGKGKVGEDDLKVERQ 1088
Query: 265 -----------LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETK 313
LD+++GCG +S GL SGV VT+WAI+ A + K NHPE+
Sbjct: 1089 KTAFQENCLATLDIFAGCGGLSEGL----QQSGVS-VTKWAIEYEEPAGDAFKLNHPESS 1143
Query: 314 V 314
+
Sbjct: 1144 M 1144
>gi|296084835|emb|CBI27717.3| unnamed protein product [Vitis vinifera]
Length = 1417
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 123/357 (34%), Positives = 179/357 (50%), Gaps = 49/357 (13%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LPLPG VDFI GGPPCQG SG NRF Q+ ++ +L F+ +Y +P++ L+E
Sbjct: 1072 NNLPLPGQVDFINGGPPCQGFSGMNRFN--QSTWSKVQCEMILAFLSFADYFRPRFFLLE 1129
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ G R V L+ M YQ R GI+ AG+YG+ Q R RVF+W A P + LP+
Sbjct: 1130 NVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGAYGVSQSRKRVFIWAASPEETLPE 1189
Query: 558 YPLPTHEIVA---RGVIPNEFQEIIV-AYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
+P P H + + Q V + A P + + + D I DLP VTN S+
Sbjct: 1190 WPEPMHVFAVPELKITLSKNMQYAAVRSTATGAPF---RAITVRDTIGDLPAVTNGASKT 1246
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
+Y + FQK IR +L DH ++N + R IPK+
Sbjct: 1247 GLEYQNGPVSWFQKKIR---------------GNMMVLTDHISKEMNELNLIRCQKIPKQ 1291
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFG 727
GA++R LP E+V L +G+ + +P+ A + H FG
Sbjct: 1292 PGADWRSLPD---------------EKVALSTGQVVDLIPWCLPNTAKR--HNQWKGLFG 1334
Query: 728 RLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
RL W+ T +T QP ++ HP QDR++++RE AR QGFPD Y+ G ++ +
Sbjct: 1335 RLDWEGNFPTSITDPQPMGKVGMCFHPDQDRLVSVRECARSQGFPDSYKFSGNIQHK 1391
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 25/181 (13%)
Query: 151 KARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAT--NMDLEAKQ 208
K R F+R ED + + A D + VF S+ P+ I K ++ + + D+ A
Sbjct: 859 KLRRFFRPED-ISAEKAYTSDIREVFYSEETHFVPVEMIEGKCEVIQKHDLPSCDVLATF 917
Query: 209 KNIPPCD-LYYDMKYTLPHLTFLNINNESNRRDSDASSTISSETGSNSPIGQPEMSL--- 264
++I C+ L+ K +L L S R+ D ++T + +G+ ++ +
Sbjct: 918 EHIFFCEHLFEPSKGSLKQLPVHIKMRYSARKAVDDAAT--RKRKGKGKVGEDDLKVERQ 975
Query: 265 -----------LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETK 313
LD+++GCG +S GL SGV VT+WAI+ A + K NHPE+
Sbjct: 976 KTAFQENCLATLDIFAGCGGLSEGL----QQSGVS-VTKWAIEYEEPAGDAFKLNHPESS 1030
Query: 314 V 314
+
Sbjct: 1031 M 1031
>gi|449462818|ref|XP_004149137.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Cucumis
sativus]
Length = 1523
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 125/351 (35%), Positives = 178/351 (50%), Gaps = 37/351 (10%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LP PG V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +PKY L+E
Sbjct: 1170 NNLPRPGQVEFINGGPPCQGFSGMNRFN--QSTWSKVQCEMILAFLSFAEYFRPKYFLLE 1227
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ G R + L+ M YQ + GI+ AG+YG+ Q R R F+W A P + LP+
Sbjct: 1228 NVRNFVSFNKGQTFRLTLASLLEMGYQVKFGILEAGAYGISQSRKRAFIWAASPEEILPE 1287
Query: 558 YPLPTHEI----VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
+P P H + + N + + A P + + + D I DLP V N S
Sbjct: 1288 WPEPMHVFGSPELKISLSDNTRYAAVPSTAGGAPF---RPITVRDTIGDLPAVGNGASVI 1344
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
+Y + + FQK I R DV+ +L DH ++N + R IPKR
Sbjct: 1345 TMEYKSEPASWFQKKI---RGDVL------------VLNDHISKEMNELNLIRCQRIPKR 1389
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDE 733
GA++RDL PD KVR ++ +P+ A + H FGRL W+
Sbjct: 1390 PGADWRDL------PDEKVRLSNGQMHDLIPW---CLPNTAKR--HNQWKGLFGRLEWEG 1438
Query: 734 IVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
T +T QP ++ HP QDR+LT+RE AR QGFPD Y+ G ++ +
Sbjct: 1439 NFPTSITDPQPMGKVGMCFHPEQDRILTVRECARSQGFPDSYKFAGNIQHK 1489
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 262 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPET 312
++ LD+++GCG +S GL +GV VT+WAI+ A ++ NHPE
Sbjct: 1082 LATLDIFAGCGGLSEGL----QQAGVS-VTKWAIEYEEPAGEAFSLNHPEA 1127
>gi|115455937|ref|NP_001051569.1| Os03g0798300 [Oryza sativa Japonica Group]
gi|113550040|dbj|BAF13483.1| Os03g0798300, partial [Oryza sativa Japonica Group]
Length = 413
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 184/355 (51%), Gaps = 49/355 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP+PG+V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +P++ L+ENV
Sbjct: 68 LPVPGEVEFINGGPPCQGFSGMNRFN--QSPWSKVQCEMILAFLSFAEYFRPRFFLLENV 125
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R + L+ M YQ R GI+ AG+YG+ Q R R F+W A P + LP++P
Sbjct: 126 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKRAFIWAAAPGETLPEWP 185
Query: 560 LPTHEIVA---RGVIPN-EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H + + +P+ +F + + A P + + + D I DLP V N +
Sbjct: 186 EPMHVFASPELKITLPDGKFYAAVKSTAAGAPF---RSITVRDTIGDLPAVENGAGKPTI 242
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+YG+ + FQK IR + MAS L DH ++N + R IPKR G
Sbjct: 243 QYGSGPVSWFQKKIR-----------SDMAS----LNDHISKEMNELNLIRCKHIPKRPG 287
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRL 729
++ DLP E+V L +G+ + +P+ A + H +GRL
Sbjct: 288 CDWHDLPD---------------EKVKLSTGQMVDLIPWCLPNTAKR--HNQWKGLYGRL 330
Query: 730 WWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
W+ T VT QP ++ HP QDR++T+RE AR QGFPD Y+ G ++ +
Sbjct: 331 DWEGNFPTSVTDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYRFAGNIQNK 385
>gi|357470695|ref|XP_003605632.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355506687|gb|AES87829.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 1641
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 176/352 (50%), Gaps = 49/352 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LPLPG VDFI GGPPCQG SG NRF + ++ +L F+ +Y +P+Y L+ENV
Sbjct: 1136 LPLPGQVDFINGGPPCQGFSGMNRFNT--STWSKVQCEMILAFLSFADYFRPRYFLLENV 1193
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R + L+ M YQ R GI+ AG++G+ Q R RVF+W A P LP++P
Sbjct: 1194 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRVFIWAASPEDVLPEWP 1253
Query: 560 LPTHEIVA---RGVIPNEFQEIIV-AYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H A + + + Q V + N P + + + D I +L V N S
Sbjct: 1254 EPMHVFSAPELKITLSEKVQYAAVRSTTNGAPL---RAITVRDTIGELQAVGNGASRTNM 1310
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+Y + + FQ IR MA +L H ++N + R IPKR G
Sbjct: 1311 EYQSDPVSWFQTKIR-----------GNMA----VLTYHISKEMNELNLIRCQKIPKRPG 1355
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRL 729
++RDL PD K+R L SG+ + +P+ A + H FGRL
Sbjct: 1356 CDWRDL------PDEKIR---------LSSGQLVDLIPWCLPNTAKR--HNQWKGLFGRL 1398
Query: 730 WWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
W T +T QP ++ HP QDR+LT+RE AR QGFPDCYQ +G +
Sbjct: 1399 DWQGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDCYQFYGNI 1450
>gi|261414304|gb|ACX83570.1| DNA methyltransferase [Hieracium pilosella]
Length = 1569
Score = 199 bits (505), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 125/353 (35%), Positives = 175/353 (49%), Gaps = 45/353 (12%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP PG VDFI GGPPCQG SG NRF Q+ + +L F+ EY +PKY L+ENV
Sbjct: 1218 LPRPGQVDFINGGPPCQGFSGMNRFN--QSTWSKAQCEMILAFLSFAEYFRPKYSLLENV 1275
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R A+ L+ M YQ R GI+ AG++G+ Q R R F+W A P + LP++P
Sbjct: 1276 RNFVSFNKGQTFRLALASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPEEILPEWP 1335
Query: 560 LPTHEIVA--RGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKY 617
P H + V N + A + + + + D I DLP V N S +Y
Sbjct: 1336 EPMHVFASPELRVSLNGNSQYAAARSTASGAPF-RAITVRDTIGDLPPVGNGASNPTIEY 1394
Query: 618 GTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGAN 677
+ FQK IR S+L DH ++N + R IPKR GA+
Sbjct: 1395 KNEPVSWFQKRIR---------------GDASVLTDHISKEMNELNVIRCQRIPKRPGAD 1439
Query: 678 FRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRLWW 731
+RDLP E+V L +G+ + +P+ A + H FGRL W
Sbjct: 1440 WRDLP---------------EEKVKLSTGQMVDLIPWCLPNTAKR--HNQWKGLFGRLDW 1482
Query: 732 DEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+ T +T QP ++ HP QDR+LT+RE AR QGFPD Y+ G ++ +
Sbjct: 1483 EGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDGYKFSGNIQHK 1535
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 7/52 (13%)
Query: 262 MSLLDLYSGCGAMSTGLC-IGASLSGVKLVTRWAIDINPHACKSLKFNHPET 312
+ LD+++GCG +S GL GAS VT+WAI+ A + + NHPE
Sbjct: 1128 LKTLDIFAGCGGLSEGLTKAGAS------VTKWAIEYEEPAGDAFRLNHPEA 1173
>gi|449494652|ref|XP_004159609.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Cucumis
sativus]
Length = 544
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 125/351 (35%), Positives = 178/351 (50%), Gaps = 37/351 (10%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LP PG V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +PKY L+E
Sbjct: 191 NNLPRPGQVEFINGGPPCQGFSGMNRFN--QSTWSKVQCEMILAFLSFAEYFRPKYFLLE 248
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ G R + L+ M YQ + GI+ AG+YG+ Q R R F+W A P + LP+
Sbjct: 249 NVRNFVSFNKGQTFRLTLASLLEMGYQVKFGILEAGAYGISQSRKRAFIWAASPEEILPE 308
Query: 558 YPLPTHEI----VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
+P P H + + N + + A P + + + D I DLP V N S
Sbjct: 309 WPEPMHVFGSPELKISLSDNTRYAAVPSTAGGAPF---RPITVRDTIGDLPAVGNGASVI 365
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
+Y + + FQK I R DV+ +L DH ++N + R IPKR
Sbjct: 366 TMEYKSEPASWFQKKI---RGDVL------------VLNDHISKEMNELNLIRCQRIPKR 410
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDE 733
GA++RDL PD KVR ++ +P+ A + H FGRL W+
Sbjct: 411 PGADWRDL------PDEKVRLSNGQMHDLIPW---CLPNTAKR--HNQWKGLFGRLEWEG 459
Query: 734 IVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
T +T QP ++ HP QDR+LT+RE AR QGFPD Y+ G ++ +
Sbjct: 460 NFPTSITDPQPMGKVGMCFHPEQDRILTVRECARSQGFPDSYKFAGNIQHK 510
Score = 45.8 bits (107), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 33/152 (21%)
Query: 175 VFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIP--PCDLYYDMKYTLPHL----- 227
++ SD P++ I K ++ K+++IP C +D + HL
Sbjct: 16 LYYSDETTMKPVSAIEGKCEVR----------KKQDIPVANCPAIFDHIFFCEHLYDPEK 65
Query: 228 -------TFLNINNESNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCI 280
+ +++ S R+ SDA+ E N P+ + ++ LD+++GCG +S GL
Sbjct: 66 GAIKKLPASVKLSSPSERQISDAAQRKKKE---NLPL-ENRLATLDIFAGCGGLSEGL-- 119
Query: 281 GASLSGVKLVTRWAIDINPHACKSLKFNHPET 312
+GV VT+WAI+ A ++ NHPE
Sbjct: 120 --QQAGVS-VTKWAIEYEEPAGEAFSLNHPEA 148
>gi|108711567|gb|ABF99362.1| expressed protein [Oryza sativa Japonica Group]
gi|215766031|dbj|BAG98259.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 376
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 184/355 (51%), Gaps = 49/355 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP+PG+V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +P++ L+ENV
Sbjct: 31 LPVPGEVEFINGGPPCQGFSGMNRFN--QSPWSKVQCEMILAFLSFAEYFRPRFFLLENV 88
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R + L+ M YQ R GI+ AG+YG+ Q R R F+W A P + LP++P
Sbjct: 89 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKRAFIWAAAPGETLPEWP 148
Query: 560 LPTHEIVA---RGVIPN-EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H + + +P+ +F + + A P + + + D I DLP V N +
Sbjct: 149 EPMHVFASPELKITLPDGKFYAAVKSTAAGAPF---RSITVRDTIGDLPAVENGAGKPTI 205
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+YG+ + FQK IR + MAS L DH ++N + R IPKR G
Sbjct: 206 QYGSGPVSWFQKKIR-----------SDMAS----LNDHISKEMNELNLIRCKHIPKRPG 250
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRL 729
++ DLP E+V L +G+ + +P+ A + H +GRL
Sbjct: 251 CDWHDLPD---------------EKVKLSTGQMVDLIPWCLPNTAKR--HNQWKGLYGRL 293
Query: 730 WWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
W+ T VT QP ++ HP QDR++T+RE AR QGFPD Y+ G ++ +
Sbjct: 294 DWEGNFPTSVTDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYRFAGNIQNK 348
>gi|159461698|gb|ABW96888.1| MET1-type DNA-methyltransferase [Elaeis guineensis]
Length = 1543
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 179/355 (50%), Gaps = 49/355 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP+PG+VDFI GGPPCQG SG NRF Q+ ++ +L F+ EY +P++ L+ENV
Sbjct: 1195 LPMPGEVDFINGGPPCQGFSGMNRFS--QSTWSKVQCEMILAFLSFAEYFRPRFFLLENV 1252
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R + L+ M YQ R GI+ AG+YG+PQ R R F+W A P + LP++P
Sbjct: 1253 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVPQSRKRAFIWAASPKETLPEWP 1312
Query: 560 LPTHEIVA---RGVIPNEFQEIIV-AYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H + + +P V + + P + + + D I DLP V N S+
Sbjct: 1313 EPMHVFASPELKITMPGGVHYAAVRSTSGGAPF---RSITVRDTIGDLPPVPNGASKPTI 1369
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
KYG+ + FQK IR M + L DH ++N ++ R IPK G
Sbjct: 1370 KYGSEPVSWFQKLIR-----------GNMFA----LNDHISKEMNELNFIRCQRIPKHPG 1414
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRL 729
A++ DLP E+V L +G+ + +P+ A + H FGRL
Sbjct: 1415 ADWHDLPD---------------EKVKLSTGQIVDLIPWCLPNTAKR--HNQWKGLFGRL 1457
Query: 730 WWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
W+ T +T QP ++ H QDR++T+RE AR QGF D Y G ++ R
Sbjct: 1458 DWEGNFPTSITDPQPMGKVGMCFHSDQDRIITVRECARSQGFLDGYHFSGNIQNR 1512
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 23/178 (12%)
Query: 151 KARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--ATNMDLEAKQ 208
K R FY E+ C D + V+ S+ P+ I K ++ + N+D
Sbjct: 980 KVRRFYIPENISAAPAYC-SDIREVYYSEEIISVPVEMIEGKCEVRKRNDLPNLDFPVVI 1038
Query: 209 KNIPPCDLYYD-MKYTLPHLTFLNINNESNRRDSDASSTISSETGSNSPIGQPE------ 261
++ CD YD +K L L N+ S R + ++ ++ G+ +
Sbjct: 1039 DHVFFCDYSYDPVKGALNQLP-ANVKFTSLTRRASNTTRKKNKGKEKCKEGEQDGSDKLK 1097
Query: 262 -------MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPET 312
++ LD+++GCG +S GL SGV T+WAI+ A ++ NHPET
Sbjct: 1098 DMAQENRLATLDIFAGCGGLSAGL----QQSGVSF-TKWAIEYEQPAGEAFSENHPET 1150
>gi|169977306|emb|CAQ18900.1| DNA (cytosine-5) methyltransferase [Nicotiana sylvestris]
Length = 1558
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 178/354 (50%), Gaps = 49/354 (13%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LPLPG VDFI GGPPCQG SG NRF Q+ ++ +L F+ +Y +PK+ L+E
Sbjct: 1208 NSLPLPGQVDFINGGPPCQGFSGMNRFN--QSTWSKVQCEMILAFLSFADYYRPKFFLLE 1265
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ R V L+ M YQ R GI+ AG++G+PQ R R F+W A P + LP+
Sbjct: 1266 NVRNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAFGVPQSRKRAFIWAASPEEILPE 1325
Query: 558 YPLPTHEI----VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
+P P H + + + + A+ P + + + D I DLP V N S+
Sbjct: 1326 WPEPMHVFGVPELKIALSETSHYAAVRSTASGAPF---RSLTVRDTIGDLPAVGNGASKT 1382
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
+Y + FQ+ I R + + LS DH ++N + R IPKR
Sbjct: 1383 CIEYQVDPVSWFQRKI---RGNSITLS------------DHITKEMNELNLIRCQRIPKR 1427
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFG 727
GA++RDLP E+V L +G+ + +P+ A + H FG
Sbjct: 1428 PGADWRDLPD---------------EKVKLSNGQLVDLIPWCLPNTAKR--HNQWKGLFG 1470
Query: 728 RLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
RL WD T +T QP ++ HP QDR++T+RE AR QGFPD YQ G +
Sbjct: 1471 RLDWDGNFPTSITDPQPMGKVGMCFHPDQDRIVTVRECARSQGFPDSYQFAGNI 1524
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 20/192 (10%)
Query: 151 KARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--ATNMDLEAKQ 208
K R F+R ED + D A D + ++ S+ P+ I K ++ + + D+ A
Sbjct: 996 KVRRFFRPED-ISSDKAYSSDIREIYYSEEIHTVPVETIEGKCEVRKKYDIPSEDVPAIF 1054
Query: 209 KNIPPCDLYYD-MKYTLPHLTFLNINNESNRRDSDASSTISSETGS-----------NSP 256
++ C+ +YD + +L L S + DA+S G N
Sbjct: 1055 DHVFFCEYFYDPLNGSLKQLPAQVKLRFSRVKLDDAASRKRKGKGKEGEDELRVGQLNEA 1114
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
Q ++ LD+++GCG +S GL SGV T+WAI+ A + K NHPE KV
Sbjct: 1115 SQQNRLATLDIFAGCGGLSEGL----QRSGVS-DTKWAIEYEEPAGDAFKLNHPEAKVFI 1169
Query: 317 EAADDFLSLLKE 328
+ + FL ++ +
Sbjct: 1170 QNCNVFLRVVMQ 1181
>gi|116062016|dbj|BAF34636.1| DNA methyltransferase 1b [Brassica rapa]
Length = 1519
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 180/350 (51%), Gaps = 39/350 (11%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LPLPG VDFI GGPPCQG SG NRF Q+ I+ + +L F+ ++Y +P+Y L+ENV
Sbjct: 1169 LPLPGQVDFINGGPPCQGFSGMNRF--SQSPWSKIQCQMVLAFLSFVDYFRPRYFLLENV 1226
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + +S G + + + L+ M YQ R G++ AG+YG+ Q R R F+W A P + LP++P
Sbjct: 1227 RNFVSYSKGQMFKLTLASLLEMGYQVRFGVLEAGAYGVSQSRKRAFIWAAAPEEVLPEWP 1286
Query: 560 LPTHEI-VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYG 618
P H V++ I A + Q + + + D I DLP V N ES +++Y
Sbjct: 1287 EPMHVFNVSQLNISLSKGLRYAAVRSTQQGAPFRPITVRDTIGDLPPVENGESNIDKEYE 1346
Query: 619 TVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANF 678
T + FQK IR ++ + DH +N + R IPKR GA++
Sbjct: 1347 TDPVSWFQKEIRGNKN---------------VPTDHLSQTMNEHNLIRCKRIPKRSGADW 1391
Query: 679 RDLPGVLVGPDNKVRWDPSMERVMLKSG--KPLVPD-YAMKFEHQSSTKP-FGRLWWDEI 734
RDLP E+V L +G L+P A K + K FGRL W+
Sbjct: 1392 RDLPD---------------EKVTLSTGLVVDLIPGCLAAKPGKKKQWKGLFGRLDWEGN 1436
Query: 735 VNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
T VT+ P + HP QDR++T+RE AR QGFPD Y+ G + +
Sbjct: 1437 FPTCVTKPGPMGMVGKCFHPDQDRIVTVRECARSQGFPDSYEFEGDIAHK 1486
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 41/219 (18%)
Query: 117 NLGDDAYVKAEEGAVDYIARIVELF---ESVDGEPYFKARWFYRAEDTVIKDLACLVDRK 173
N+G A+V + ++VE+ +S G R FYR ED V + A D +
Sbjct: 928 NIGLRAFV---------VCQLVEIIVPKKSRKGSFEVNVRRFYRPED-VSERKAYASDIR 977
Query: 174 RVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEA-----KQKNIPPCDLYYD-MKYTLPHL 227
V+ S ED + K K EV D+ + +NI C+ YD K ++ L
Sbjct: 978 EVYYS--EDTFVVQPEALKGK-CEVRKKKDMPSCSEFPISENIFFCEQIYDPSKGSVKQL 1034
Query: 228 TFLNINNESNRRD-----SDASSTISSETGSNSPIGQPE-------MSLLDLYSGCGAMS 275
S +D + SETGS I +P+ ++ LD+++GCG +S
Sbjct: 1035 PLSTKPKYSTVKDDALLRKKKGKGVESETGSG--IVKPDELPKEMRLATLDIFAGCGGLS 1092
Query: 276 TGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
GL +GV T+WAI+ A ++ + NHPET V
Sbjct: 1093 QGL----EQAGVS-ATKWAIEYEGPAGEAFRKNHPETTV 1126
>gi|350536241|ref|NP_001234748.1| DNA (cytosine-5)-methyltransferase [Solanum lycopersicum]
gi|2887280|emb|CAA05207.1| DNA (cytosine-5)-methyltransferase [Solanum lycopersicum]
Length = 1559
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/354 (34%), Positives = 175/354 (49%), Gaps = 49/354 (13%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LPLPG VDFI GGPPCQG SG NRF Q+ ++ +L F+ +Y +PK+ L+E
Sbjct: 1209 NSLPLPGQVDFINGGPPCQGFSGMNRFN--QSTWSKVQCEMILAFLSFADYYRPKFFLLE 1266
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ R V L+ M YQ R GI+ AG+YG+PQ R R F+W P + LP+
Sbjct: 1267 NVRNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAYGVPQSRKRAFIWAGSPEEVLPE 1326
Query: 558 YPLPTHEI----VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
+P P H + + + + + A+ P + + + D I DLP+V N S+
Sbjct: 1327 WPEPMHVFAVPELKIALSETSYYAAVRSTASGAPF---RSLTVRDTIGDLPVVGNGASKT 1383
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
+Y + FQK IR L DH ++N + R IPKR
Sbjct: 1384 CIEYQGDPVSWFQKKIR---------------GSSITLSDHISKEMNELNLIRCQRIPKR 1428
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFG 727
GA++RDL E+V L +G+ + +P+ A + H FG
Sbjct: 1429 PGADWRDLED---------------EKVKLSNGQLVDLIPWCLPNTAKR--HNQWKGLFG 1471
Query: 728 RLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
RL WD T +T QP ++ HP QDR++T+RE AR QGFPD YQ G +
Sbjct: 1472 RLDWDGNFPTSITDPQPMGKVGMCFHPDQDRIVTVRECARSQGFPDSYQFAGNI 1525
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 18/176 (10%)
Query: 151 KARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--ATNMDLEAKQ 208
K R F+R ED + D A D + ++ S+ P+ I K ++ + ++ D+ A
Sbjct: 999 KVRRFFRPED-ISSDKAYSSDIREIYYSEDIHTVPVEIIKGKCEVRKKYDISSEDVPAMF 1057
Query: 209 KNIPPCDLYYD----MKYTLPH-----LTFLNINNESNRRDSDASSTISSETGS-NSPIG 258
+I C+ YD LP L+ + +++ ++R+ E G N
Sbjct: 1058 DHIFFCEYLYDPLNGSLKKLPAQINLILSKIKLDDATSRKRKGKGKEGVDEVGELNETSP 1117
Query: 259 QPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
Q +S LD+++GCG +S GL SGV T WAI+ A + + NHP+TKV
Sbjct: 1118 QNRLSTLDIFAGCGGLSEGL----QHSGVT-DTNWAIEYEAPAGDAFRLNHPKTKV 1168
>gi|168010951|ref|XP_001758167.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690623|gb|EDQ76989.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1579
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/353 (34%), Positives = 174/353 (49%), Gaps = 37/353 (10%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
+ +LP G+VDFI GGPPCQG SG NRF A ++ +L F+ EY +P+Y L
Sbjct: 1214 KKKLLPAQGEVDFINGGPPCQGFSGMNRFNT--GAWSKVQCEMILGFLSYAEYFRPRYFL 1271
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + + F+ G R + L+ M YQ R G++ AG+YG+ Q R R F+W A P + L
Sbjct: 1272 LENVRNFVSFNKGQTFRLTLATLLEMGYQVRFGVLQAGNYGVSQSRKRAFIWAAAPNEIL 1331
Query: 556 PQYPLPTHEIVA---RGVIPNEFQEIIVAYAN-NQPCQLEKGVLLSDAISDLPLVTNNES 611
P++P P H + + +P V A P + + + D I DLP V N S
Sbjct: 1332 PEWPEPMHVFGSSQLKIALPGGASYAAVRDAGKGAPL---RAMTVKDTIYDLPPVENGAS 1388
Query: 612 EDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIP 671
++E KY + FQK IR + LYDH ++N + ER IP
Sbjct: 1389 KEEIKYSDPPVSWFQKQIR---------------GNETALYDHIAKEMNELNLERCKHIP 1433
Query: 672 KRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWW 731
K GA++R L PD K++ ++ P D H FGRL W
Sbjct: 1434 KYPGADWRTL------PDIKIKLSTGTMVDLIPWCLPNTAD-----RHNQWKGLFGRLDW 1482
Query: 732 DEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
D T VT QP ++ HP QDR++T+RE AR QGFPD Y+ G ++ +
Sbjct: 1483 DGNFPTSVTDPQPMGKVGMCFHPEQDRIVTVRECARSQGFPDSYKFSGTIQSK 1535
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 262 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADD 321
++ LD+++GCG +S GL +GV T+WAI+ A ++ NHPET V E +
Sbjct: 1128 LATLDIFAGCGGLSEGL----RQAGVA-TTKWAIEYEHPASEAFNLNHPETNVFCENCNV 1182
Query: 322 FLSLLKE 328
L + E
Sbjct: 1183 ILRCIME 1189
>gi|297792161|ref|XP_002863965.1| hypothetical protein ARALYDRAFT_331330 [Arabidopsis lyrata subsp.
lyrata]
gi|297309800|gb|EFH40224.1| hypothetical protein ARALYDRAFT_331330 [Arabidopsis lyrata subsp.
lyrata]
Length = 1532
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/353 (35%), Positives = 175/353 (49%), Gaps = 43/353 (12%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
+ + LPLPG VDFI GGPPCQG SG NRF Q++ ++ +L F+ +Y +P+Y L
Sbjct: 1177 QKSTLPLPGQVDFINGGPPCQGFSGMNRFN--QSSWSKVQCEMILAFLSFADYFRPRYFL 1234
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + F+ G + + L+ M YQ R GI+ AG+YG+ Q R R F+W A P + L
Sbjct: 1235 LENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAAAPEEVL 1294
Query: 556 PQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLE-KGVLLSDAISDLPLVTNNESEDE 614
P++P P H + + Q + A + + + + D I DLP V N ES
Sbjct: 1295 PEWPEPMHVFGVPKLKISLSQGLHYAAVRSTALGAPFRPITVRDTIGDLPSVENGESMTN 1354
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
++Y VA + FQK IR M + L DH +N + R IPKR
Sbjct: 1355 KEYKDVAVSWFQKEIR-----------GNMIA----LTDHICKAMNQLNLIRCQHIPKRP 1399
Query: 675 GANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKP------LVPDYAMKFEHQSSTKPFGR 728
GA++ DLP E+V L +G +P+ A + H FGR
Sbjct: 1400 GADWHDLPN---------------EKVKLSNGHVEEMIPWCLPNTAKR--HNGWKGLFGR 1442
Query: 729 LWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
L W T +T QP ++ HP QDR+LT+RE AR QGFPD Y+ G +
Sbjct: 1443 LDWQGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYEFAGNI 1495
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 21/178 (11%)
Query: 151 KARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAK--- 207
K R FYR ED ++ A D + ++ S D P + K ++ + ++M L +
Sbjct: 968 KVRRFYRPEDVSVEK-AYASDIQELYYSQDTDVLPPGALEGKCEVRK-KSDMPLCREYPI 1025
Query: 208 QKNIPPCDLYYDMKY----TLP---HLTFLNINNESNRRDSDA----SSTISSETGSNSP 256
+I CDL++D LP L F I +++ R S T+S + P
Sbjct: 1026 SDHIFFCDLFFDSSKGSLKQLPANMKLKFSTIKDDTLLRKKKGKGVESETVSEIVKPDEP 1085
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
+ ++ LD+++GCG +S GL +GV T+WAI+ A ++ K NHPE+ V
Sbjct: 1086 PKEIRLATLDIFAGCGGLSQGL----KKAGVS-DTKWAIEYEEPAGQAFKQNHPESTV 1138
>gi|357119215|ref|XP_003561341.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Brachypodium
distachyon]
Length = 1542
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 182/355 (51%), Gaps = 49/355 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP+PG+V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +P++ L+ENV
Sbjct: 1194 LPVPGEVEFINGGPPCQGFSGMNRFN--QSPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1251
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R AV L+ M YQ R GI+ AG++G+ Q R R F+W A P + LP +P
Sbjct: 1252 RNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGTFGVAQSRKRAFIWAAAPGEILPDWP 1311
Query: 560 LPTHEIVA---RGVIPN-EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H + + +P+ ++ + A P + + + D I DLP V N ++
Sbjct: 1312 EPMHVFASPELKITLPDGKYYAAAKSTAGGAPF---RAITVRDTIGDLPKVENGANKLIL 1368
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+YG + FQK IR + +A L DH ++N + R IPKR G
Sbjct: 1369 EYGGEPTSWFQKKIR----------GSTIA-----LNDHISKEMNELNLIRCKHIPKRPG 1413
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRL 729
++ DLP E+V L SG+ + +P+ A + H +GRL
Sbjct: 1414 CDWHDLPD---------------EKVKLSSGQMVDLIPWCLPNTAKR--HNQWKGLYGRL 1456
Query: 730 WWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
W+ T VT QP ++ HP QDR++T+RE AR QGFPD YQ G ++ +
Sbjct: 1457 DWEGNFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDSYQFAGTIQSK 1511
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 39/185 (21%)
Query: 153 RWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA--TNMDLEAKQKN 210
R FYR +D + D A D + V+ S+ + P++ I K + + +N DL ++
Sbjct: 983 RRFYRPDD-ISSDKAYTSDIREVYYSEDIINVPVDMIEGKCDVRKKIDISNSDLPVMVEH 1041
Query: 211 IPPCDLYYD-----MKYTLPHLTFLNINN---------------ESNRRDSDASSTISSE 250
+ C+ YD +K P++ ++ E+++ DSD + E
Sbjct: 1042 VFFCEHIYDPMTGALKQLPPNVKLTSMVQKAAGALKKNKGKQICENDQVDSDKRKEVPKE 1101
Query: 251 TGSNSPIGQPEMSLLDLYSGCGAMSTGL-CIGASLSGVKLVTRWAIDINPHACKSLKFNH 309
+S LD+++GCG +S GL GAS T+WAI+ A ++ + NH
Sbjct: 1102 N---------RISTLDIFAGCGGLSEGLQQAGASF------TKWAIEYEEPAGEAFRQNH 1146
Query: 310 PETKV 314
PE V
Sbjct: 1147 PEAAV 1151
>gi|116062014|dbj|BAF34635.1| DNA methyltransferase 1a [Brassica rapa]
Length = 1528
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/356 (35%), Positives = 178/356 (50%), Gaps = 57/356 (16%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LPLPG VDFI GGPPCQG SG NRF Q++ ++ +L F+ +Y +P+Y L+ENV
Sbjct: 1178 LPLPGQVDFINGGPPCQGFSGMNRFN--QSSWSKVQCEMILAFLSFADYFRPRYFLLENV 1235
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ F+ G + + L+ M YQ R GI+ AG+YG+ Q R R F+W A P + LP++P
Sbjct: 1236 RTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAAAPDEVLPEWP 1295
Query: 560 LPTHEI--------VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNES 611
P H +++GV A + Q + + + D I DLP V N ES
Sbjct: 1296 EPMHVFGVPELKISLSKGV-------HYAAVRSTQYGAPFRPITVRDTIGDLPSVVNGES 1348
Query: 612 EDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIP 671
+R+Y + FQK I R D + L+ DH ++N + R IP
Sbjct: 1349 NTKREYKAQPISWFQKEI---RGDNIALT------------DHICKEMNELNLIRCKKIP 1393
Query: 672 KRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKP 725
KR GA++RDLP E+V L G+ + +P+ A + H
Sbjct: 1394 KRPGADWRDLP---------------EEKVTLSKGQVVDLIPWCLPNTAKR--HNQWKGL 1436
Query: 726 FGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
FGRL W+ T +T QP ++ HP QDR++T+RE AR QGFPD Y G +
Sbjct: 1437 FGRLDWEGNFPTSITDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDSYVFQGNI 1492
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 113/266 (42%), Gaps = 52/266 (19%)
Query: 89 RYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEE-------------------- 128
R + E++ ++ T S +G Y++ D YVK E+
Sbjct: 882 RIREDEEKKTEIKLNSSKTGFSCNGVDYSVDDYVYVKPEDIDGSKEANGRFKSGRNIGLR 941
Query: 129 -GAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLN 187
V I I+ L ES K R YR ED V + A D + ++ S ED + L
Sbjct: 942 PFVVCQILEIIVLKESRKASFEVKVRRLYRPED-VSDEKAYASDIQELYYS--EDTDVLQ 998
Query: 188 CIVSKAKIAEVATNMDLEAKQK-----NIPPCDLYYD-MKYTLPHL------TFLNINNE 235
+ + EV +D+ ++++ NI C+ YD K +L L + + +E
Sbjct: 999 PEALEGR-CEVRKKIDMPSRREYPISDNIFFCEQIYDPSKGSLKQLPVNIKPKYTTVKDE 1057
Query: 236 SNRRDSDASSTISSETGSNSPIGQPE-------MSLLDLYSGCGAMSTGLCIGASLSGVK 288
+ R + T ++S +PE ++ LD+++GCG +S GL +GV
Sbjct: 1058 ALLRKRKGKGLV---TETDSVTDKPEEVSKETRLATLDIFAGCGGLSQGL----EQAGVS 1110
Query: 289 LVTRWAIDINPHACKSLKFNHPETKV 314
T+WAI+ A K+ + NHPET V
Sbjct: 1111 -ATKWAIEYEEPAGKAFRKNHPETTV 1135
>gi|147771321|emb|CAN71866.1| hypothetical protein VITISV_027340 [Vitis vinifera]
Length = 374
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/357 (34%), Positives = 179/357 (50%), Gaps = 49/357 (13%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LPLPG VDFI GGPPCQG SG NRF Q+ ++ +L F+ +Y +P++ L+E
Sbjct: 29 NNLPLPGQVDFINGGPPCQGFSGMNRFN--QSTWSKVQCEMILAFLSFADYFRPRFFLLE 86
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ G R V L+ M YQ R GI+ AG+YG+ Q R RVF+W A P + LP+
Sbjct: 87 NVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGAYGVSQSRKRVFIWAASPEETLPE 146
Query: 558 YPLPTHEIVA---RGVIPNEFQEIIV-AYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
+P P H + + Q V + A P + + + D I DLP VTN S+
Sbjct: 147 WPEPMHVFAVPELKITLSKNMQYAAVRSTATGAPF---RAITVRDTIGDLPAVTNGASKT 203
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
+Y + FQK IR +L DH ++N + R IPK+
Sbjct: 204 GLEYQNGPVSWFQKKIR---------------GNMMVLTDHISKEMNELNLIRCQKIPKQ 248
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFG 727
GA++R LP E+V L +G+ + +P+ A + H FG
Sbjct: 249 PGADWRSLPD---------------EKVALSTGQVVDLIPWCLPNTAKR--HNQWKGLFG 291
Query: 728 RLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
RL W+ T +T QP ++ HP QDR++++RE AR QGFPD Y+ G ++ +
Sbjct: 292 RLDWEGNFPTSITDPQPMGKVGMCFHPXQDRLVSVRECARSQGFPDSYKFSGNIQHK 348
>gi|242043138|ref|XP_002459440.1| hypothetical protein SORBIDRAFT_02g004680 [Sorghum bicolor]
gi|241922817|gb|EER95961.1| hypothetical protein SORBIDRAFT_02g004680 [Sorghum bicolor]
Length = 1397
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/357 (33%), Positives = 180/357 (50%), Gaps = 49/357 (13%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LP+PG+V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +P++ L+E
Sbjct: 1040 NNLPVPGEVEFINGGPPCQGFSGMNRFN--QSPWSKVQCEMILAFLSFAEYFRPRFFLLE 1097
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ G R AV L+ M YQ R GI+ AG++G+ Q R R F+W A P + LP
Sbjct: 1098 NVRNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGVAQSRKRAFIWAAAPGEMLPD 1157
Query: 558 YPLPTHEIVA---RGVIPN-EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
+P P H + + +P+ ++ + A P + + + D I DLP V N S+
Sbjct: 1158 WPEPMHVFASPELKITLPDGQYYAAARSTAGGAPF---RAITVRDTIGDLPKVENGASKL 1214
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
+YG + FQK IR +L DH ++N + R IPKR
Sbjct: 1215 TLEYGGEPVSWFQKKIR---------------GNMMVLNDHISKEMNELNLIRCQHIPKR 1259
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKP------LVPDYAMKFEHQSSTKPFG 727
G ++ DLP E+V L +G+ +P+ A + H +G
Sbjct: 1260 PGCDWHDLPD---------------EKVKLSNGQMADLIPWCLPNTAKR--HNQWKGLYG 1302
Query: 728 RLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
RL W+ T VT QP ++ HP QDR++T+RE AR QGFPD Y+ G ++ +
Sbjct: 1303 RLDWEGNFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDSYEFAGNIQNK 1359
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 152 ARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--ATNMDLEAKQK 209
AR FYR +D + A D + V+ S+ D P++ I K ++ + + DL +
Sbjct: 830 ARRFYRPDD-ISTAKAYASDIREVYYSEDVIDVPVDMIEGKCEVRKKNDLASSDLPVMFE 888
Query: 210 NIPPCDLYYD-----MKYTLPHLTFLNINNES---NRRDSDASSTISSETGSNSPIGQPE 261
++ C+L YD +K P++ F+++ ++ ++++ + + S + P+
Sbjct: 889 HVFFCELIYDRASGALKQLPPNVRFMSMVQKATIASKKNKGKQICETDQIDSGKWLDVPK 948
Query: 262 ---MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
++ LD+++GCG +S GL +GV T+WAI+ A ++ NHPE V
Sbjct: 949 ENRLATLDIFAGCGGLSEGL----QQAGVSF-TKWAIEYEEPAGEAFSKNHPEAVV 999
>gi|3132825|gb|AAC16389.1| putative cytosine-5 DNA methyltransferase [Zea mays]
Length = 1525
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/357 (34%), Positives = 182/357 (50%), Gaps = 49/357 (13%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LP+PG+V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +P++ L+E
Sbjct: 1169 NNLPVPGEVEFINGGPPCQGFSGMNRFN--QSPWSKVQCEMILAFLSFAEYFRPRFFLLE 1226
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ G R AV L+ M YQ R GI+ AG++G+ Q R R F+W A P + LP
Sbjct: 1227 NVRNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGVAQSRKRAFIWAAAPGEMLPD 1286
Query: 558 YPLPTHEIVA---RGVIPN-EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
+P P H + + +P+ ++ + A P + + + D I DLP V N S+
Sbjct: 1287 WPEPMHVFASPELKITLPDGQYYAAARSTAGGAPF---RAITVRDTIGDLPKVGNGASKL 1343
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
+YG + FQK IR + M +L DH ++N + R IPKR
Sbjct: 1344 TLEYGGEPVSWFQKKIR----------GSMM-----VLNDHISKEMNELNLIRCQHIPKR 1388
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKP------LVPDYAMKFEHQSSTKPFG 727
G ++ DLP E+V L +G+ +P+ A + H +G
Sbjct: 1389 PGCDWHDLPD---------------EKVKLSNGQMADLIPWCLPNTAKR--HNQWKGLYG 1431
Query: 728 RLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
RL W+ T VT QP ++ HP QDR++T+RE AR QGFPD Y+ G ++ +
Sbjct: 1432 RLDWEGNFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDSYEFAGNIQNK 1488
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 105/236 (44%), Gaps = 31/236 (13%)
Query: 152 ARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--ATNMDLEAKQK 209
AR FYR +D + A D + V+ S+ D P++ I K ++ + + DL +
Sbjct: 960 ARRFYRPDD-ISSAKAYASDIREVYYSEDVIDVPVDMIEGKCEVRKKNDLASSDLPVMFE 1018
Query: 210 NIPPCDLYYD-----MKYTLPHLTFLNINNESNRRDSDASSTIS--SETGSNSPIGQPE- 261
++ C+L YD +K P++ F+++ ++ + I + S + P+
Sbjct: 1019 HVFFCELIYDRASGALKQLPPNVRFMSMVQRTSALKKNKGKQICEPDQIDSGKWLDVPKE 1078
Query: 262 --MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 319
++ LD+++GCG +S GL +GV T+WAI+ A ++ NHPE V
Sbjct: 1079 NRLATLDIFAGCGGLSEGL----QQAGVSF-TKWAIEYEEPAGEAFNKNHPEAVV---FV 1130
Query: 320 DDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNE 375
D+ +LK C DTD SE E+ + E N ++ VP E
Sbjct: 1131 DNCNVILKAIMDKCG-----DTDDCVS-----TSEAAEQAAKLPEVNINNLPVPGE 1176
>gi|414883785|tpg|DAA59799.1| TPA: cytosine-specific methyltransferase [Zea mays]
Length = 1536
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/357 (33%), Positives = 180/357 (50%), Gaps = 49/357 (13%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LP+PG+V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +P++ L+E
Sbjct: 1180 NNLPVPGEVEFINGGPPCQGFSGMNRFN--QSPWSKVQCEMILAFLSFAEYFRPRFFLLE 1237
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ G R AV L+ M YQ R GI+ AG++G+ Q R R F+W A P + LP
Sbjct: 1238 NVRNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGVAQSRKRAFIWAAAPGEMLPD 1297
Query: 558 YPLPTHEIVA---RGVIPN-EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
+P P H + + +P+ ++ + A P + + + D I DLP V N S+
Sbjct: 1298 WPEPMHVFASPELKITLPDGQYYAAARSTAGGAPF---RAITVRDTIGDLPKVGNGASKL 1354
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
+YG + FQK IR +L DH ++N + R IPKR
Sbjct: 1355 TLEYGGEPVSWFQKKIR---------------GNMMVLNDHISKEMNELNLIRCQHIPKR 1399
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKP------LVPDYAMKFEHQSSTKPFG 727
G ++ DLP E+V L +G+ +P+ A + H +G
Sbjct: 1400 PGCDWHDLPD---------------EKVKLSNGQMADLIPWCLPNTAKR--HNQWKGLYG 1442
Query: 728 RLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
RL W+ T VT QP ++ HP QDR++T+RE AR QGFPD Y+ G ++ +
Sbjct: 1443 RLDWEGNFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDSYEFAGNIQNK 1499
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 18/175 (10%)
Query: 152 ARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--ATNMDLEAKQK 209
AR FYR +D + A D + V+ S+ D P++ I K ++ + + DL +
Sbjct: 971 ARRFYRPDD-ISSAKAYASDIREVYYSEDVIDVPVDMIEGKCEVRKKNDLASSDLPVMFE 1029
Query: 210 NIPPCDLYYD-----MKYTLPHLTFLNINNESNRRDSDASSTIS--SETGSNSPIGQPE- 261
++ C+L YD +K P++ F+++ ++ + I + S + P+
Sbjct: 1030 HVFFCELIYDRASGALKQLPPNVRFMSMVQRTSALKKNKGKQICEPDQIDSGKWLDVPKE 1089
Query: 262 --MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
++ LD+++GCG +S GL +GV T+WAI+ A ++ NHPE V
Sbjct: 1090 NRLATLDIFAGCGGLSEGL----QQAGVSF-TKWAIEYEEPAGEAFNKNHPEAVV 1139
>gi|15236676|ref|NP_192638.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|7267541|emb|CAB78023.1| Met2-type cytosine DNA-methyltransferase-like protein [Arabidopsis
thaliana]
gi|332657308|gb|AEE82708.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
Length = 1512
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/352 (34%), Positives = 176/352 (50%), Gaps = 35/352 (9%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
+ + LPLPG DFI GGPPCQG SG NRF + + ++ +L F+ +Y +PKY L
Sbjct: 1157 QKSTLPLPGQADFISGGPPCQGFSGMNRFSD--GSWSKVQCEMILAFLSFADYFRPKYFL 1214
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + ++ G + + L+ + YQ R GI+ AG+YG+ Q R RV +W A P + L
Sbjct: 1215 LENVKKFVTYNKGRTFQLTMASLLEIGYQVRFGILEAGTYGVSQPRKRVIIWAASPEEVL 1274
Query: 556 PQYPLPTHEIVARG---VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESE 612
P++P P H G +P V N + + + + D I DLPLV N ES+
Sbjct: 1275 PEWPEPMHVFDNPGSKISLPRGLHYDTV--RNTKFGAPFRSITVRDTIGDLPLVENGESK 1332
Query: 613 DERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPK 672
++Y T + FQK IR S+L DH +N + R IPK
Sbjct: 1333 INKEYRTTPVSWFQKKIR---------------GNMSVLTDHICKGLNELNLIRCKKIPK 1377
Query: 673 RKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWD 732
R GA++RDL PD V ++ +++ +PL K H +GRL W
Sbjct: 1378 RPGADWRDL------PDENV----TLSNGLVEKLRPLALSKTAK-NHNEWKGLYGRLDWQ 1426
Query: 733 EIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+ +T QP ++ HP QDR++T+RE AR QGFPD Y+ G K +
Sbjct: 1427 GNLPISITDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYEFSGTTKHK 1478
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 23/116 (19%)
Query: 214 CDLYYDMKY----TLP---HLTFLNINNESNRRDSDASSTISSETGSNSPI--------G 258
C+++YD P L F I +E+ R+ ETG++S I
Sbjct: 1011 CEVFYDSSTGYLKQFPANMKLKFSTIKDETLLREKKGKGV---ETGTSSGILMKPDEVPK 1067
Query: 259 QPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
+ ++ LD+++GCG +S GL +GV T+WAI+ A + K NHPE V
Sbjct: 1068 EMRLATLDIFAGCGGLSHGL----EKAGVS-NTKWAIEYEEPAGHAFKQNHPEATV 1118
>gi|414883787|tpg|DAA59801.1| TPA: cytosine-specific methyltransferase [Zea mays]
Length = 1536
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 120/357 (33%), Positives = 180/357 (50%), Gaps = 49/357 (13%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LP+PG+V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +P++ L+E
Sbjct: 1180 NNLPVPGEVEFINGGPPCQGFSGMNRFN--QSPWSKVQCEMILAFLSFAEYFRPRFFLLE 1237
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ G R AV L+ M YQ R GI+ AG++G+ Q R R F+W A P + LP
Sbjct: 1238 NVRNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGVAQSRKRAFIWAAAPGEMLPD 1297
Query: 558 YPLPTHEIVA---RGVIPN-EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
+P P H + + +P+ ++ + A P + + + D + DLP V N S+
Sbjct: 1298 WPEPMHVFASPELKITLPDGQYYAAARSTAGGAPF---RAITVRDTVGDLPKVGNGASKL 1354
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
+YG + FQK IR +L DH ++N + R IPKR
Sbjct: 1355 TLEYGGEPVSWFQKKIR---------------GNMMVLNDHISKEMNELNLIRCQHIPKR 1399
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKP------LVPDYAMKFEHQSSTKPFG 727
G ++ DLP E+V L +G+ +P+ A + H +G
Sbjct: 1400 PGCDWHDLPD---------------EKVKLSNGQMADLIPWCLPNTAKR--HNQWKGLYG 1442
Query: 728 RLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
RL W+ T VT QP ++ HP QDR++T+RE AR QGFPD Y+ G ++ +
Sbjct: 1443 RLDWEGNFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDSYEFAGNIQNK 1499
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 18/175 (10%)
Query: 152 ARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--ATNMDLEAKQK 209
AR FYR +D + A D + V+ S+ D P++ I K ++ + + DL +
Sbjct: 971 ARRFYRPDD-ISSAKAYASDIREVYYSEDVIDVPVDMIEGKCEVRKKNDLASSDLPVMFE 1029
Query: 210 NIPPCDLYYD-----MKYTLPHLTFLNINNESNRRDSDASSTIS--SETGSNSPIGQPE- 261
++ C+L YD +K P++ F+++ ++ + I + S + P+
Sbjct: 1030 HVFFCELIYDRASGALKQLPPNVRFMSMVQRTSALKKNKGKQICEPDQIDSGKWLDVPKE 1089
Query: 262 --MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
++ LD+++GCG +S GL +GV T+WAI+ A ++ NHPE V
Sbjct: 1090 NRLATLDIFAGCGGLSEGL----QQAGVSF-TKWAIEYEEPAGEAFNKNHPEAVV 1139
>gi|297804976|ref|XP_002870372.1| hypothetical protein ARALYDRAFT_355455 [Arabidopsis lyrata subsp.
lyrata]
gi|297316208|gb|EFH46631.1| hypothetical protein ARALYDRAFT_355455 [Arabidopsis lyrata subsp.
lyrata]
Length = 1496
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 121/352 (34%), Positives = 180/352 (51%), Gaps = 35/352 (9%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
+ +ILPLPG VDFI GGPPCQG SG NRF + + ++ +L F+ +Y +PKY L
Sbjct: 1131 QKSILPLPGQVDFINGGPPCQGFSGMNRFSD--RSWSKVQCEMILAFLSFADYFRPKYFL 1188
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + F+ G + V L+ M YQ R G++ AG+YG+ Q R R F+W A P + L
Sbjct: 1189 LENVKKFVTFNKGRTFQLTVASLLEMGYQVRFGLLEAGAYGISQPRKRAFIWAAAPNEVL 1248
Query: 556 PQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLE---KGVLLSDAISDLPLVTNNESE 612
P++P P H G + + + YA Q + + + + D I DLP V + ES+
Sbjct: 1249 PEWPEPMHVFNNPGFKISLSRRL--HYAAVQSTKFGAPFRSITVRDTIGDLPPVESGESK 1306
Query: 613 DERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPK 672
++Y V + FQK +M +L DH ++N + R IPK
Sbjct: 1307 INKEYDIVPVSWFQK---------------EMRGNKIVLTDHICQKMNELNLIRCKKIPK 1351
Query: 673 RKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWD 732
GA++RDL PD V+ + ++ SG L+ EH +GRL W
Sbjct: 1352 TPGADWRDL------PDENVKLSNGVVVKLIPSG--LINKAK---EHNGYRGLYGRLDWQ 1400
Query: 733 EIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+ T +T QP + HP QDR++++RE AR QGFPD Y+ G +K++
Sbjct: 1401 GNLPTSITTPQPMGWVGMCFHPDQDRIISVRECARSQGFPDSYEFSGKIKDK 1452
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 80/180 (44%), Gaps = 28/180 (15%)
Query: 153 RWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQK--- 209
R FYR ED + +LA + + V+ S P I K EV D+ ++
Sbjct: 923 RRFYRPED-ISAELAYASEIQEVYYSQDTYILPPEAIKGKC---EVMKKHDMPLCREYPV 978
Query: 210 --NIPPCDLYYDMKY----TLPH---LTFLNINNESNRRDSDASSTISSETGSNSPIGQP 260
+I C+ +YD LP L F I +E R+ +S ET S +
Sbjct: 979 LDHIFFCERFYDSSNDHLEKLPSNMKLKFSTIKDEKLLREKKGKGVLS-ETDSVMSVKPD 1037
Query: 261 E------MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
E ++ LD+++GCG +S GL +GV T+WAI+ A ++ K NHP+T V
Sbjct: 1038 EVPKEMRLATLDIFAGCGGLSYGL----EKAGVS-DTKWAIEYEEPAAQAFKQNHPKTTV 1092
>gi|10257413|gb|AAG15406.1| cytosine-5 DNA methyltransferase MET1 [Zea mays]
Length = 784
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 121/351 (34%), Positives = 181/351 (51%), Gaps = 37/351 (10%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LP+PG+V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +P++ L+E
Sbjct: 428 NNLPVPGEVEFINGGPPCQGFSGMNRFN--QSPWSKVQCEMILAFLSFAEYFRPRFFLLE 485
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ G R AV L+ M YQ R GI+ AG++G+ Q R R F+W A P + LP
Sbjct: 486 NVRNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGVAQSRKRAFIWAAAPGEMLPD 545
Query: 558 YPLPTHEIVA---RGVIPN-EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
+P P H + + +P+ ++ + A P + + + D I DLP V N S+
Sbjct: 546 WPEPMHVFASPELKITLPDGQYYAAARSTAGGAPF---RAITVRDTIGDLPKVGNGASKL 602
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
+YG + FQK IR + M +L DH ++N + R IPKR
Sbjct: 603 TLEYGGEPVSWFQKKIR----------GSMM-----VLNDHISKEMNELNLIRCQHIPKR 647
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDE 733
G ++ DL PD KV+ ++ +P+ A + H +GRL W+
Sbjct: 648 PGCDWHDL------PDEKVKLSNGQMADLIPW---CLPNTAKR--HNQWKGLYGRLDWEG 696
Query: 734 IVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
T VT QP ++ HP QDR++T+RE AR QGFPD Y+ G ++ +
Sbjct: 697 NFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDSYEFAGNIQNK 747
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 105/236 (44%), Gaps = 31/236 (13%)
Query: 152 ARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--ATNMDLEAKQK 209
AR FYR +D + A D + V+ S+ D P++ I K ++ + + DL +
Sbjct: 219 ARRFYRPDD-ISSAKAYASDIREVYYSEDVIDVPVDMIEGKCEVRKKNDLASSDLPVMFE 277
Query: 210 NIPPCDLYYD-----MKYTLPHLTFLNINNESNRRDSDASSTIS--SETGSNSPIGQPE- 261
++ C+L YD +K P++ F+++ ++ + I + S + P+
Sbjct: 278 HVFFCELIYDRASGALKQLPPNVRFMSMVQRTSALKKNKGKQICEPDQIDSGKWLDVPKE 337
Query: 262 --MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 319
++ LD+++GCG +S GL +GV T+WAI+ A ++ NHPE V
Sbjct: 338 NRLATLDIFAGCGGLSEGL----QQAGVSF-TKWAIEYEEPAGEAFNKNHPEAVV---FV 389
Query: 320 DDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNE 375
D+ +LK C DTD SE E+ + E N ++ VP E
Sbjct: 390 DNCNVILKAIMDKCG-----DTDDCVS-----TSEAAEQAAKLPEVNINNLPVPGE 435
>gi|257096314|sp|B1Q3J6.1|DNM1B_ORYSJ RecName: Full=DNA (cytosine-5)-methyltransferase 1B; Short=OsMET1b;
AltName: Full=DNA methyltransferase 1-2; Short=OsMET1-2
gi|171196103|dbj|BAG15929.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
Length = 1529
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 176/355 (49%), Gaps = 49/355 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP+PG+V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +P++ L+ENV
Sbjct: 1183 LPVPGEVEFINGGPPCQGFSGMNRFN--QSPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1240
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R V L+ M YQ R GI+ AG++G+ Q R R F+W A P + LP +P
Sbjct: 1241 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGVAQSRKRAFIWAAAPGETLPDWP 1300
Query: 560 LPTHEIVARGVIPN----EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H + + N ++ + A P + + + D I DLP V N S+
Sbjct: 1301 EPMHVFASPELKINLPDGKYYAAAKSTAGGAPF---RAITVRDTIGDLPKVENGASKLLL 1357
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+YG + FQK IR L DH ++N + R IPKR G
Sbjct: 1358 EYGGEPISWFQKKIR---------------GNTIALNDHISKEMNELNLIRCQRIPKRPG 1402
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRL 729
++ DLP E+V L SG+ + +P+ A + H +GRL
Sbjct: 1403 CDWHDLPD---------------EKVKLSSGQLVDLIPWCLPNTAKR--HNQWKGLYGRL 1445
Query: 730 WWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
W+ T VT QP ++ HP QDR++T+RE AR QGFPD YQ G ++ +
Sbjct: 1446 DWEGNFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDNYQFAGNIQSK 1500
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 37/184 (20%)
Query: 153 RWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA--TNMDLEAKQKN 210
R FYR +D + A + D + V+ S+ P++ I K ++ + +N D+ ++
Sbjct: 972 RRFYRPDD-ISSAKAYVSDIREVYYSENIVKVPVDMIEGKCEVKKKIDISNSDVPVMVEH 1030
Query: 211 IPPCDLYYD-----MKYTLPHLTFLNINN---------------ESNRRDSDASSTISSE 250
C+ +YD +K P++ +++ ES++ DSD + +S E
Sbjct: 1031 EFFCEHFYDPATGALKQLPPNVKLMSVQQKATGALKKNKGKQICESDQVDSDKCTKVSKE 1090
Query: 251 TGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP 310
++ LD+++GCG +S GL +GV T+WAI+ A ++ NHP
Sbjct: 1091 N---------RLATLDIFAGCGGLSEGL----QQAGVSF-TKWAIEYEEPAGEAFTKNHP 1136
Query: 311 ETKV 314
E V
Sbjct: 1137 EAAV 1140
>gi|171196104|dbj|BAG15930.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
Length = 1486
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 176/355 (49%), Gaps = 49/355 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP+PG+V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +P++ L+ENV
Sbjct: 1140 LPVPGEVEFINGGPPCQGFSGMNRFN--QSPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1197
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R V L+ M YQ R GI+ AG++G+ Q R R F+W A P + LP +P
Sbjct: 1198 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGVAQSRKRAFIWAAAPGETLPDWP 1257
Query: 560 LPTHEIVARGVIPN----EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H + + N ++ + A P + + + D I DLP V N S+
Sbjct: 1258 EPMHVFASPELKINLPDGKYYAAAKSTAGGAPF---RAITVRDTIGDLPKVENGASKLLL 1314
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+YG + FQK IR L DH ++N + R IPKR G
Sbjct: 1315 EYGGEPISWFQKKIR---------------GNTIALNDHISKEMNELNLIRCQRIPKRPG 1359
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRL 729
++ DLP E+V L SG+ + +P+ A + H +GRL
Sbjct: 1360 CDWHDLPD---------------EKVKLSSGQLVDLIPWCLPNTAKR--HNQWKGLYGRL 1402
Query: 730 WWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
W+ T VT QP ++ HP QDR++T+RE AR QGFPD YQ G ++ +
Sbjct: 1403 DWEGNFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDNYQFAGNIQSK 1457
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 37/184 (20%)
Query: 153 RWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA--TNMDLEAKQKN 210
R FYR +D + A + D + V+ S+ P++ I K ++ + +N D+ ++
Sbjct: 929 RRFYRPDD-ISSAKAYVSDIREVYYSENIVKVPVDMIEGKCEVKKKIDISNSDVPVMVEH 987
Query: 211 IPPCDLYYD-----MKYTLPHLTFLNINN---------------ESNRRDSDASSTISSE 250
C+ +YD +K P++ +++ ES++ DSD + +S E
Sbjct: 988 EFFCEHFYDPATGALKQLPPNVKLMSVQQKATGALKKNKGKQICESDQVDSDKCTKVSKE 1047
Query: 251 TGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP 310
++ LD+++GCG +S GL +GV T+WAI+ A ++ NHP
Sbjct: 1048 N---------RLATLDIFAGCGGLSEGL----QQAGVSF-TKWAIEYEEPAGEAFTKNHP 1093
Query: 311 ETKV 314
E V
Sbjct: 1094 EAAV 1097
>gi|50509186|dbj|BAD30340.1| putative DNA methyltransferase [Oryza sativa Japonica Group]
Length = 1548
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 176/355 (49%), Gaps = 49/355 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP+PG+V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +P++ L+ENV
Sbjct: 1202 LPVPGEVEFINGGPPCQGFSGMNRFN--QSPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1259
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R V L+ M YQ R GI+ AG++G+ Q R R F+W A P + LP +P
Sbjct: 1260 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGVAQSRKRAFIWAAAPGETLPDWP 1319
Query: 560 LPTHEIVARGVIPN----EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H + + N ++ + A P + + + D I DLP V N S+
Sbjct: 1320 EPMHVFASPELKINLPDGKYYAAAKSTAGGAPF---RAITVRDTIGDLPKVENGASKLLL 1376
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+YG + FQK IR L DH ++N + R IPKR G
Sbjct: 1377 EYGGEPISWFQKKIR---------------GNTIALNDHISKEMNELNLIRCQRIPKRPG 1421
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRL 729
++ DLP E+V L SG+ + +P+ A + H +GRL
Sbjct: 1422 CDWHDLPD---------------EKVKLSSGQLVDLIPWCLPNTAKR--HNQWKGLYGRL 1464
Query: 730 WWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
W+ T VT QP ++ HP QDR++T+RE AR QGFPD YQ G ++ +
Sbjct: 1465 DWEGNFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDNYQFAGNIQSK 1519
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 44/184 (23%)
Query: 153 RWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA--TNMDLEAKQKN 210
R FYR +D + K V+ S+ P++ I K ++ + +N D+ ++
Sbjct: 998 RRFYRPDD--------ISSAKAVYYSENIVKVPVDMIEGKCEVKKKIDISNSDVPVMVEH 1049
Query: 211 IPPCDLYYD-----MKYTLPHLTFLNINN---------------ESNRRDSDASSTISSE 250
C+ +YD +K P++ +++ ES++ DSD + +S E
Sbjct: 1050 EFFCEHFYDPATGALKQLPPNVKLMSVQQKATGALKKNKGKQICESDQVDSDKCTKVSKE 1109
Query: 251 TGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP 310
++ LD+++GCG +S GL +GV T+WAI+ A ++ NHP
Sbjct: 1110 N---------RLATLDIFAGCGGLSEGL----QQAGVSF-TKWAIEYEEPAGEAFTKNHP 1155
Query: 311 ETKV 314
E V
Sbjct: 1156 EAAV 1159
>gi|222636555|gb|EEE66687.1| hypothetical protein OsJ_23341 [Oryza sativa Japonica Group]
Length = 1555
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 176/355 (49%), Gaps = 49/355 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP+PG+V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +P++ L+ENV
Sbjct: 1209 LPVPGEVEFINGGPPCQGFSGMNRFN--QSPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1266
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R V L+ M YQ R GI+ AG++G+ Q R R F+W A P + LP +P
Sbjct: 1267 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGVAQSRKRAFIWAAAPGETLPDWP 1326
Query: 560 LPTHEIVARGVIPN----EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H + + N ++ + A P + + + D I DLP V N S+
Sbjct: 1327 EPMHVFASPELKINLPDGKYYAAAKSTAGGAPF---RAITVRDTIGDLPKVENGASKLLL 1383
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+YG + FQK IR L DH ++N + R IPKR G
Sbjct: 1384 EYGGEPISWFQKKIR---------------GNTIALNDHISKEMNELNLIRCQRIPKRPG 1428
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRL 729
++ DLP E+V L SG+ + +P+ A + H +GRL
Sbjct: 1429 CDWHDLPD---------------EKVKLSSGQLVDLIPWCLPNTAKR--HNQWKGLYGRL 1471
Query: 730 WWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
W+ T VT QP ++ HP QDR++T+RE AR QGFPD YQ G ++ +
Sbjct: 1472 DWEGNFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDNYQFAGNIQSK 1526
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 37/184 (20%)
Query: 153 RWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA--TNMDLEAKQKN 210
R FYR +D + A + D + V+ S+ P++ I K ++ + +N D+ ++
Sbjct: 998 RRFYRPDD-ISSAKAYVSDIREVYYSENIVKVPVDMIEGKCEVKKKIDISNSDVPVMVEH 1056
Query: 211 IPPCDLYYD-----MKYTLPHLTFLNINN---------------ESNRRDSDASSTISSE 250
C+ +YD +K P++ +++ ES++ DSD + +S E
Sbjct: 1057 EFFCEHFYDPATGALKQLPPNVKLMSVQQKATGALKKNKGKQICESDQVDSDKCTKVSKE 1116
Query: 251 TGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP 310
++ LD+++GCG +S GL +GV T+WAI+ A ++ NHP
Sbjct: 1117 N---------RLATLDIFAGCGGLSEGL----QQAGVSF-TKWAIEYEEPAGEAFTKNHP 1162
Query: 311 ETKV 314
E V
Sbjct: 1163 EAAV 1166
>gi|37201980|tpg|DAA01513.1| TPA_exp: putative cytosine-5 DNA methyltransferase [Oryza sativa
(japonica cultivar-group)]
Length = 1497
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 176/355 (49%), Gaps = 49/355 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP+PG+V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +P++ L+ENV
Sbjct: 1151 LPVPGEVEFINGGPPCQGFSGMNRFN--QSPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1208
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R V L+ M YQ R GI+ AG++G+ Q R R F+W A P + LP +P
Sbjct: 1209 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGVAQSRKRAFIWAAAPGETLPDWP 1268
Query: 560 LPTHEIVARGVIPN----EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H + + N ++ + A P + + + D I DLP V N S+
Sbjct: 1269 EPMHVFASPELKINLPDGKYYAAAKSTAGGAPF---RAITVRDTIGDLPKVENGASKLLL 1325
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+YG + FQK IR L DH ++N + R IPKR G
Sbjct: 1326 EYGGEPISWFQKKIR---------------GNTIALNDHISKEMNELNLIRCQRIPKRPG 1370
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRL 729
++ DLP E+V L SG+ + +P+ A + H +GRL
Sbjct: 1371 CDWHDLPD---------------EKVKLSSGQLVDLIPWCLPNTAKR--HNQWKGLYGRL 1413
Query: 730 WWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
W+ T VT QP ++ HP QDR++T+RE AR QGFPD YQ G ++ +
Sbjct: 1414 DWEGNFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDNYQFAGNIQSK 1468
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 37/184 (20%)
Query: 153 RWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA--TNMDLEAKQKN 210
R FYR +D + A + D + V+ S+ P++ I K ++ + +N D+ ++
Sbjct: 940 RRFYRPDD-ISSAKAYVSDIREVYYSENIVKVPVDMIEGKCEVKKKIDISNSDVPVMVEH 998
Query: 211 IPPCDLYYD-----MKYTLPHLTFLNINN---------------ESNRRDSDASSTISSE 250
C+ +YD +K P++ +++ ES++ DSD + +S E
Sbjct: 999 EFFCEHFYDPATGALKQLPPNVKLMSVQQKATGALKKNKGKQICESDQVDSDKCTKVSKE 1058
Query: 251 TGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP 310
++ LD+++GCG +S GL +GV T+WAI+ A ++ NHP
Sbjct: 1059 N---------RLATLDIFAGCGGLSEGL----QQAGVSF-TKWAIEYEEPAGEAFTKNHP 1104
Query: 311 ETKV 314
E V
Sbjct: 1105 EAAV 1108
>gi|218199194|gb|EEC81621.1| hypothetical protein OsI_25142 [Oryza sativa Indica Group]
Length = 1538
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 176/355 (49%), Gaps = 49/355 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP+PG+V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +P++ L+ENV
Sbjct: 1192 LPVPGEVEFINGGPPCQGFSGMNRFN--QSPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1249
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R V L+ M YQ R GI+ AG++G+ Q R R F+W A P + LP +P
Sbjct: 1250 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGVAQSRKRAFIWAAAPGETLPDWP 1309
Query: 560 LPTHEIVARGVIPN----EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H + + N ++ + A P + + + D I DLP V N S+
Sbjct: 1310 EPMHVFASPELKINLPDGKYYAAAKSTAGGAPF---RAITVRDTIGDLPKVENGASKLLL 1366
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+YG + FQK IR L DH ++N + R IPKR G
Sbjct: 1367 EYGGEPISWFQKKIR---------------GNTIALNDHVSKEMNELNLIRCQRIPKRPG 1411
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRL 729
++ DLP E+V L SG+ + +P+ A + H +GRL
Sbjct: 1412 CDWHDLPD---------------EKVKLSSGQLVDLIPWCLPNTAKR--HNQWKGLYGRL 1454
Query: 730 WWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
W+ T VT QP ++ HP QDR++T+RE AR QGFPD YQ G ++ +
Sbjct: 1455 DWEGNFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDNYQFAGNIQSK 1509
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 37/184 (20%)
Query: 153 RWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA--TNMDLEAKQKN 210
R FYR +D + A + D + V+ S+ P++ I K ++ + +N D+ ++
Sbjct: 981 RRFYRPDD-ISSAKAYVSDIREVYYSENIVKVPVDMIEGKCEVKKKIDISNSDVPVMVEH 1039
Query: 211 IPPCDLYYD-----MKYTLPHLTFLNINN---------------ESNRRDSDASSTISSE 250
C+ +YD +K P++ +++ ES++ DSD + +S E
Sbjct: 1040 EFFCEHFYDPATGALKQLPPNVKLMSVQQKATGALKKNKGKQICESDQVDSDKCTKVSKE 1099
Query: 251 TGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP 310
++ LD+++GCG +S GL +GV T+WAI+ A ++ NHP
Sbjct: 1100 N---------RLATLDIFAGCGGLSQGL----QQAGVSF-TKWAIEYEEPAGEAFTKNHP 1145
Query: 311 ETKV 314
E V
Sbjct: 1146 EAAV 1149
>gi|219885163|gb|ACL52956.1| unknown [Zea mays]
Length = 385
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/351 (34%), Positives = 179/351 (50%), Gaps = 37/351 (10%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LP+PG+V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +P++ L+E
Sbjct: 29 NNLPVPGEVEFINGGPPCQGFSGMNRFN--QSPWSKVQCEMILAFLSFAEYFRPRFFLLE 86
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ G R AV L+ M YQ R GI+ AG++G+ Q R R F+W A P + LP
Sbjct: 87 NVRNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGVAQSRKRAFIWAAAPGEMLPD 146
Query: 558 YPLPTHEIVA---RGVIPN-EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
+P P H + + +P+ ++ + A P + + + D I DLP V N S+
Sbjct: 147 WPEPMHVFASPELKITLPDGQYYAAARSTAGGAPF---RAITVRDTIGDLPKVGNGASKL 203
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
+YG + FQK IR +L DH ++N + R IPKR
Sbjct: 204 TLEYGGEPVSWFQKKIR---------------GNMMVLNDHISKEMNELNLIRCQHIPKR 248
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDE 733
G ++ DL PD KV+ ++ +P+ A + H +GRL W+
Sbjct: 249 PGCDWHDL------PDEKVKLSNGQMADLIPW---CLPNTAKR--HNQWKGLYGRLDWEG 297
Query: 734 IVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
T VT QP ++ HP QDR++T+RE AR QGFPD Y+ G ++ +
Sbjct: 298 NFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDSYEFAGNIQNK 348
>gi|117307345|dbj|BAF36443.1| DNA methyltransferase type 1 [Nicotiana tabacum]
Length = 1558
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 125/355 (35%), Positives = 178/355 (50%), Gaps = 51/355 (14%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LPLPG VDFI GGPPCQG SG NRF Q+ ++ +L F+ +Y +PK+ L+E
Sbjct: 1208 NSLPLPGQVDFINGGPPCQGFSGMNRFN--QSTWSKVQCEMILAFLSFADYYRPKFFLLE 1265
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ R V L+ M YQ R GI+ AG++G+PQ R R F+W A P + LP+
Sbjct: 1266 NVRNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAFGVPQSRKRAFIWAASPEEILPE 1325
Query: 558 YPLPTHEIVARGVIPNEFQEI-----IVAYANNQPCQLEKGVLLSDAISDLPLVTNNESE 612
+P P H + + E + + A+ P + + + D I DLP V N S+
Sbjct: 1326 WPEPMH-VFGVPELKITLSETCHYAAVRSTASGAPF---RSLTVRDTIGDLPAVGNGASK 1381
Query: 613 DERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPK 672
+Y + FQ+ I R + + LS DH ++N + R IPK
Sbjct: 1382 TCIEYQVDPISWFQRKI---RGNSITLS------------DHITKEMNELNLIRCQRIPK 1426
Query: 673 RKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPF 726
R GA++RDLP E+V L +G+ + +P+ A + H F
Sbjct: 1427 RPGADWRDLPD---------------EKVKLCNGQLVDLIPWCLPNTAKR--HNQWKGLF 1469
Query: 727 GRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
GRL WD T T QP ++ HP QDR++T+RE AR QGFPD YQ G +
Sbjct: 1470 GRLDWDGNFPTSFTDPQPMGKVGMCFHPDQDRIVTVRECARSQGFPDSYQFAGNI 1524
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 20/178 (11%)
Query: 151 KARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--ATNMDLEAKQ 208
K R F+R ED + D A D + ++ S+ P+ I K ++ + + D+ A
Sbjct: 996 KVRRFFRPED-ISSDKAYSSDIREIYYSEEIHTVPVETIEGKCEVRKKYDIPSEDVPATF 1054
Query: 209 KNIPPCDLYYD-MKYTLPHLTFLNINNESNRRDSDASSTISSETGS-----------NSP 256
++ C+ YD + +L L S + DA+S G N
Sbjct: 1055 DHVFFCEYLYDPLNGSLKQLPAQVKLRFSRVKLDDAASRKRKGKGKEGEDELRVGQLNVA 1114
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
Q ++ LD+++GCG +S GL SGV T+WAI+ A + K NHPE KV
Sbjct: 1115 SQQNRLATLDIFAGCGGLSEGL----QRSGVS-DTKWAIEYEEPAGDAFKLNHPEAKV 1167
>gi|7288140|dbj|BAA92852.1| DNA (cytosine-5-)-methyltransferase [Nicotiana tabacum]
gi|56130955|gb|AAV80209.1| cytosine-5-methyltransferase [Nicotiana tabacum]
Length = 1556
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 125/355 (35%), Positives = 178/355 (50%), Gaps = 51/355 (14%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LPLPG VDFI GGPPCQG SG NRF Q+ ++ +L F+ +Y +PK+ L+E
Sbjct: 1206 NSLPLPGQVDFINGGPPCQGFSGMNRFN--QSTWSKVQCEMILAFLSFADYYRPKFFLLE 1263
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ R V L+ M YQ R GI+ AG++G+PQ R R F+W A P + LP+
Sbjct: 1264 NVRNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAFGVPQSRKRAFIWAASPEEILPE 1323
Query: 558 YPLPTHEIVARGVIPNEFQEI-----IVAYANNQPCQLEKGVLLSDAISDLPLVTNNESE 612
+P P H + + E + + A+ P + + + D I DLP V N S+
Sbjct: 1324 WPEPMH-VFGVPELKITLSETCHYAAVRSTASGAPF---RSLTVRDTIGDLPAVGNGASK 1379
Query: 613 DERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPK 672
+Y + FQ+ I R + + LS DH ++N + R IPK
Sbjct: 1380 TCIEYQVDPISWFQRKI---RGNSITLS------------DHITKEMNELNLIRCQRIPK 1424
Query: 673 RKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPF 726
R GA++RDLP E+V L +G+ + +P+ A + H F
Sbjct: 1425 RPGADWRDLPD---------------EKVKLCNGQLVDLIPWCLPNTAKR--HNQWKGLF 1467
Query: 727 GRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
GRL WD T T QP ++ HP QDR++T+RE AR QGFPD YQ G +
Sbjct: 1468 GRLDWDGNFPTSFTDPQPMGKVGMCFHPDQDRIVTVRECARSQGFPDSYQFAGNI 1522
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 20/178 (11%)
Query: 151 KARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--ATNMDLEAKQ 208
K R F+R ED + D A D + ++ S+ P+ I K ++ + + D+ A
Sbjct: 994 KVRRFFRPED-ISSDKAYSSDIREIYYSEEIHTVPVETIEGKCEVRKKYDIPSEDVPATF 1052
Query: 209 KNIPPCDLYYD-MKYTLPHLTFLNINNESNRRDSDASSTISSETGS-----------NSP 256
++ C+ YD + +L L S + DA+S G N
Sbjct: 1053 DHVFFCEYLYDPLNGSLKQLPAQVKLRFSRVKLDDAASRKRKGKGKEGEDELRVGQLNVA 1112
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
Q ++ LD+++GCG +S GL SGV T+WAI+ A + K NHPE KV
Sbjct: 1113 SQQNRLATLDIFAGCGGLSEGL----QRSGVS-DTKWAIEYEEPAGDAFKLNHPEAKV 1165
>gi|357115052|ref|XP_003559306.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1A-like [Brachypodium
distachyon]
Length = 1528
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 120/355 (33%), Positives = 182/355 (51%), Gaps = 49/355 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP+PG+V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +P++ L+ENV
Sbjct: 1183 LPVPGEVEFINGGPPCQGFSGMNRFN--QSPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1240
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R + L+ M YQ R GI+ AG+YG+ Q R R F+W A P + LP +P
Sbjct: 1241 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKRAFIWAAAPGETLPDWP 1300
Query: 560 LPTHEIVA---RGVIPN-EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H + + +P+ ++ + A P + + + D I DLP V N S+
Sbjct: 1301 EPMHVFASPELKITLPDGKYYAAAKSTAGGAPF---RSITVRDTIGDLPPVENGASKPTI 1357
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+YG+ + FQK I R DV++L+ D ++N + R IPKR G
Sbjct: 1358 QYGSEPISWFQKKI---RGDVLSLN------------DQISKEMNELNLIRCKHIPKRPG 1402
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRL 729
++ DLP E+V L SG+ + +P+ A + H +GRL
Sbjct: 1403 CDWHDLPD---------------EKVKLSSGQMVELIPWCLPNTAKR--HNQWKGLYGRL 1445
Query: 730 WWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
W+ T VT QP ++ HP QDR++T+RE AR QGF D Y+ G ++ +
Sbjct: 1446 DWEGNFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFLDGYRFAGNIQSK 1500
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 28/191 (14%)
Query: 153 RWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIP 212
R YR +D + A D + V+ S+ P+ I K EV T +L N+P
Sbjct: 973 RRLYRPDD-ISSARAYSSDIREVYYSEDMLSVPVAMIEGKC---EVTTKNNL--PDSNLP 1026
Query: 213 P-------CDLYYD-----MKYTLPHLTFLNINNESNRRDSDASSTI--SSETGSN---S 255
C+ YD +K ++ + I ++ + I S + GS+ +
Sbjct: 1027 VVVDHVFYCEYLYDPDTGALKQLQSNVKLMTIARKAPTSKKNKGKQICDSDQAGSDKQKA 1086
Query: 256 PIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVR 315
+ ++ LD+++GCG +S GL LSG T+WAI+ A ++ NHPE V
Sbjct: 1087 AASENSLATLDIFAGCGGLSEGL----QLSGASH-TKWAIEYEEPAGQAFGENHPEAAVF 1141
Query: 316 NEAADDFLSLL 326
E + L +
Sbjct: 1142 VENCNVILKAI 1152
>gi|162463699|ref|NP_001105186.1| DNA methyl transferase1 [Zea mays]
gi|20977598|gb|AAM28226.1| DNA methyltransferase 101 [Zea mays]
Length = 1457
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 119/357 (33%), Positives = 179/357 (50%), Gaps = 49/357 (13%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LP+PG+V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +P++ L+E
Sbjct: 1101 NNLPVPGEVEFINGGPPCQGFSGMNRFN--QSPWSKVQCEMILAFLSFAEYFRPRFFLLE 1158
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ G R AV L+ M YQ R GI+ AG++G+ Q R R F+W A P + LP
Sbjct: 1159 NVRNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGVAQSRKRAFIWAAAPGEMLPD 1218
Query: 558 YPLPTHEIVA---RGVIPN-EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
+P P H + + +P+ ++ + A P + + + D + DLP V N S+
Sbjct: 1219 WPEPMHVFASPELKITLPDGQYYAAARSTAGGAPF---RAITVRDTVGDLPKVGNGASKL 1275
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
+YG + FQK IR +L DH ++N + R I KR
Sbjct: 1276 TLEYGGEPVSWFQKKIR---------------GNMMVLNDHISKEMNELNLIRCQHIQKR 1320
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKP------LVPDYAMKFEHQSSTKPFG 727
G ++ DLP E+V L +G+ +P+ A + H +G
Sbjct: 1321 PGCDWHDLPD---------------EKVKLSNGQMADLIPWCLPNTAKR--HNQWKGLYG 1363
Query: 728 RLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
RL W+ T VT QP ++ HP QDR++T+RE AR QGFPD Y+ G ++ +
Sbjct: 1364 RLDWEGNFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDSYEFAGNIQNK 1420
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 18/175 (10%)
Query: 152 ARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEV--ATNMDLEAKQK 209
AR FYR +D + A D + V+ S+ D P++ I K ++ + + DL +
Sbjct: 892 ARRFYRPDD-ISSAKAYASDIREVYYSEDVIDVPVDMIEGKCEVRKKNDLASSDLPVMFE 950
Query: 210 NIPPCDLYYD-----MKYTLPHLTFLNINNESNRRDSDASSTIS--SETGSNSPIGQPE- 261
++ C+L YD +K P++ F+++ ++ + I + S + P+
Sbjct: 951 HVFFCELIYDRASGALKQLPPNVRFMSMVQRTSALKKNKGKQICEPDQIDSGKWLDVPKE 1010
Query: 262 --MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
++ LD+++GCG +S GL +GV T+WAI+ A ++ NHPE V
Sbjct: 1011 NRLATLDIFAGCGGLSEGL----QQAGVSF-TKWAIEYEEPAGEAFNKNHPEAVV 1060
>gi|255573870|ref|XP_002527854.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
gi|223532778|gb|EEF34557.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
Length = 1584
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 120/355 (33%), Positives = 175/355 (49%), Gaps = 49/355 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
P PG+V+FI GGPPCQG SG NRF Q + ++ +L F+ +Y +PK+ L+ENV
Sbjct: 1214 FPRPGEVEFINGGPPCQGFSGMNRFN--QRSWSKVQCEMILAFLSFADYFRPKFFLLENV 1271
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R + L+ M YQ R G++ AG++G+ Q R R F+W A P + LP++P
Sbjct: 1272 RNFVSFNKGNTFRLTLASLLEMGYQVRFGVLEAGAFGISQSRKRAFIWAASPEEILPEWP 1331
Query: 560 LPTHEIVA----RGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H + N + + AN P + + + D I DLP V N S
Sbjct: 1332 EPMHVFAGPELKIKLSGNSQYAAVRSTANGAPF---RAITVRDTIGDLPAVGNGASLTTM 1388
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+Y + FQK IR +L DH ++N + R IPK G
Sbjct: 1389 QYKNEPVSWFQKTIR---------------GDALVLTDHISKEMNELNLIRCKRIPKHPG 1433
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRL 729
A++RDL PD KV+ L +G+ + +P+ A + H FGRL
Sbjct: 1434 ADWRDL------PDKKVK---------LSNGQLVDLVPWCLPNTAKR--HNQWKGLFGRL 1476
Query: 730 WWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
W+ T VT QP ++ HP QDR+LT+RE AR QGF D YQ G ++++
Sbjct: 1477 DWEGNFPTSVTDPQPMGKVGMCFHPEQDRILTVRECARSQGFADSYQFLGNIQQK 1531
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 28/181 (15%)
Query: 151 KARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQK- 209
K R F+R+ED ++ C D + V+ S+ + P+ I K EV DL + K
Sbjct: 998 KVRRFFRSEDISAENAYC-SDIREVYYSEHIETFPILDIQGKC---EVRKKHDLPSFDKL 1053
Query: 210 ----NIPPCDLYYD-MKYTLPHL-TFLNINNESNRRDSD------------ASSTISSET 251
+I C+ YD K T+ L + +++ R + D +
Sbjct: 1054 AIFEHIFFCEHIYDPEKGTIKQLPAHIKLSSSKERMNDDILYRKKKGKCKEGENDFDDNV 1113
Query: 252 GSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPE 311
+ + + +++ LD+++GCG +S GL +G+ VT+WAI+ A ++ K NHPE
Sbjct: 1114 KRSEALSRNQLATLDIFAGCGGLSEGL----ERAGIS-VTKWAIEYEEPAGEAFKQNHPE 1168
Query: 312 T 312
Sbjct: 1169 A 1169
>gi|296084836|emb|CBI27718.3| unnamed protein product [Vitis vinifera]
Length = 1429
Score = 192 bits (487), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 122/357 (34%), Positives = 175/357 (49%), Gaps = 49/357 (13%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LPLPG VDFI GGPPCQG SG NRF Q+ ++ +L F+ +Y +PK+ L+E
Sbjct: 1079 NNLPLPGQVDFINGGPPCQGFSGMNRFN--QSTWSKVQCEMILAFLSFADYFRPKFFLLE 1136
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ G R + L+ M YQ R GI+ AG+YG+ Q R R F+W A P + LP+
Sbjct: 1137 NVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAASPEETLPE 1196
Query: 558 YPLPTHEIVA---RGVIPNEFQEIIV-AYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
+P P H + + Q V + A P + + + D I DLP V N S
Sbjct: 1197 WPEPMHVFAVPELKITLSENMQYAAVRSTATGAPF---RAITVRDTIGDLPDVKNGASIT 1253
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
+Y + FQK IR M +L DH ++N + R IPK+
Sbjct: 1254 NLEYQNDPVSWFQKKIR-----------GNMV----VLMDHISKEMNELNLIRCQKIPKQ 1298
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFG 727
GA++ LP E+V L +G+ + +P+ A + H FG
Sbjct: 1299 PGADWHSLPD---------------EKVKLSTGQLVDLIPWCLPNTAKR--HNQWKGLFG 1341
Query: 728 RLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
RL W+ T +T QP ++ HP QDR+L++RE AR QGF D YQ G ++ +
Sbjct: 1342 RLDWEGNFPTSITDPQPMGKVGMCFHPEQDRILSVRECARSQGFRDSYQFAGNIQHK 1398
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 92/223 (41%), Gaps = 48/223 (21%)
Query: 117 NLGDDAYVKAE--EGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKR 174
N+G AYV + E V + +I E +S+ + R F+R ED + C D +
Sbjct: 835 NVGLKAYVVCQMLEIVVPKVPKIAET-KSIQ----VQVRRFFRPEDISAEKAYC-SDIRE 888
Query: 175 VFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCD-------------LYYDMK 221
V+ S+ P+ I K ++ K+ ++PPCD LY K
Sbjct: 889 VYYSEETHSVPVETIEGKCEVM----------KKHDLPPCDVPAIFDHVFFCERLYDPSK 938
Query: 222 YTLPHLTFLNINNESNRRDSD----ASSTISSETGSNS--------PIGQPEMSLLDLYS 269
L L S R++ D ++ G N + ++ LD+++
Sbjct: 939 GCLKQLPAHIKLRYSARKEVDDAAARKKKGKAKEGENDLEVERQIDAFHENRLATLDIFA 998
Query: 270 GCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPET 312
GCG +S GL SGV VT+WAI+ A + K NHPE+
Sbjct: 999 GCGGLSEGL----QQSGVS-VTKWAIEYEEPAGDAFKLNHPES 1036
>gi|115470907|ref|NP_001059052.1| Os07g0182900 [Oryza sativa Japonica Group]
gi|113610588|dbj|BAF20966.1| Os07g0182900, partial [Oryza sativa Japonica Group]
Length = 445
Score = 192 bits (487), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 176/355 (49%), Gaps = 49/355 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP+PG+V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +P++ L+ENV
Sbjct: 99 LPVPGEVEFINGGPPCQGFSGMNRFN--QSPWSKVQCEMILAFLSFAEYFRPRFFLLENV 156
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R V L+ M YQ R GI+ AG++G+ Q R R F+W A P + LP +P
Sbjct: 157 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGVAQSRKRAFIWAAAPGETLPDWP 216
Query: 560 LPTHEIVARGVIPN----EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H + + N ++ + A P + + + D I DLP V N S+
Sbjct: 217 EPMHVFASPELKINLPDGKYYAAAKSTAGGAPF---RAITVRDTIGDLPKVENGASKLLL 273
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+YG + FQK IR L DH ++N + R IPKR G
Sbjct: 274 EYGGEPISWFQKKIR---------------GNTIALNDHISKEMNELNLIRCQRIPKRPG 318
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRL 729
++ DLP E+V L SG+ + +P+ A + H +GRL
Sbjct: 319 CDWHDLPD---------------EKVKLSSGQLVDLIPWCLPNTAKR--HNQWKGLYGRL 361
Query: 730 WWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
W+ T VT QP ++ HP QDR++T+RE AR QGFPD YQ G ++ +
Sbjct: 362 DWEGNFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDNYQFAGNIQSK 416
>gi|213498012|emb|CAS84141.1| DNA (cytosine-5) methyltransferase [Nicotiana tomentosiformis]
Length = 395
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/355 (35%), Positives = 179/355 (50%), Gaps = 51/355 (14%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LPLPG VDFI GGPPCQG SG NRF Q+ ++ +L F+ +Y +PK+ L+E
Sbjct: 78 NSLPLPGQVDFINGGPPCQGFSGMNRFN--QSTWSKVQCEMILAFLSFADYYRPKFFLLE 135
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ R V L+ M YQ R GI+ AG++G+PQ R R F+W A P + LP+
Sbjct: 136 NVRNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAFGVPQSRKRAFIWAASPEEILPE 195
Query: 558 YPLPTHEIVARGVIPNEFQEI-----IVAYANNQPCQLEKGVLLSDAISDLPLVTNNESE 612
+P P H + + E + + A+ P + + + D I DLP V N S+
Sbjct: 196 WPEPMH-VFGVPELKITLSETCHYAAVRSTASGAPF---RSLTVRDTIGDLPAVGNGASK 251
Query: 613 DERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPK 672
+Y + FQ+ I R + + LS DH ++N + R IPK
Sbjct: 252 TCIEYQVDPISWFQRKI---RGNSITLS------------DHITKEMNELNLIRCQRIPK 296
Query: 673 RKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPF 726
R GA++RDLP E+V L +G+ + +P+ A + H F
Sbjct: 297 RPGADWRDLPD---------------EKVKLCNGQLVDLIPWCLPNTAKR--HNQWKGLF 339
Query: 727 GRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
GRL WD T +T QP ++ HP QDR++T+RE AR QGFPD YQ G +
Sbjct: 340 GRLDWDGNFPTSITDPQPMGKVGMCFHPDQDRIVTVRECARSQGFPDSYQFAGNI 394
>gi|225463167|ref|XP_002267200.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Vitis
vinifera]
Length = 1549
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/357 (34%), Positives = 175/357 (49%), Gaps = 49/357 (13%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LPLPG VDFI GGPPCQG SG NRF Q+ ++ +L F+ +Y +PK+ L+E
Sbjct: 1199 NNLPLPGQVDFINGGPPCQGFSGMNRFN--QSTWSKVQCEMILAFLSFADYFRPKFFLLE 1256
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ G R + L+ M YQ R GI+ AG+YG+ Q R R F+W A P + LP+
Sbjct: 1257 NVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAASPEETLPE 1316
Query: 558 YPLPTHEIVA---RGVIPNEFQEIIV-AYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
+P P H + + Q V + A P + + + D I DLP V N S
Sbjct: 1317 WPEPMHVFAVPELKITLSENMQYAAVRSTATGAPF---RAITVRDTIGDLPDVKNGASIT 1373
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
+Y + FQK IR M +L DH ++N + R IPK+
Sbjct: 1374 NLEYQNDPVSWFQKKIR-----------GNMV----VLMDHISKEMNELNLIRCQKIPKQ 1418
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFG 727
GA++ LP E+V L +G+ + +P+ A + H FG
Sbjct: 1419 PGADWHSLPD---------------EKVKLSTGQLVDLIPWCLPNTAKR--HNQWKGLFG 1461
Query: 728 RLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
RL W+ T +T QP ++ HP QDR+L++RE AR QGF D YQ G ++ +
Sbjct: 1462 RLDWEGNFPTSITDPQPMGKVGMCFHPEQDRILSVRECARSQGFRDSYQFAGNIQHK 1518
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 92/223 (41%), Gaps = 48/223 (21%)
Query: 117 NLGDDAYVKAE--EGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKR 174
N+G AYV + E V + +I E +S+ + R F+R ED + C D +
Sbjct: 955 NVGLKAYVVCQMLEIVVPKVPKIAET-KSIQ----VQVRRFFRPEDISAEKAYC-SDIRE 1008
Query: 175 VFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCD-------------LYYDMK 221
V+ S+ P+ I K ++ K+ ++PPCD LY K
Sbjct: 1009 VYYSEETHSVPVETIEGKCEVM----------KKHDLPPCDVPAIFDHVFFCERLYDPSK 1058
Query: 222 YTLPHLTFLNINNESNRRDSD----ASSTISSETGSNS--------PIGQPEMSLLDLYS 269
L L S R++ D ++ G N + ++ LD+++
Sbjct: 1059 GCLKQLPAHIKLRYSARKEVDDAAARKKKGKAKEGENDLEVERQIDAFHENRLATLDIFA 1118
Query: 270 GCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPET 312
GCG +S GL SGV VT+WAI+ A + K NHPE+
Sbjct: 1119 GCGGLSEGL----QQSGVS-VTKWAIEYEEPAGDAFKLNHPES 1156
>gi|2865418|gb|AAC02661.1| chromomethylase [Arabidopsis thaliana]
Length = 248
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/246 (43%), Positives = 151/246 (61%), Gaps = 22/246 (8%)
Query: 59 KKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALN-----------------EEEEVL- 100
K+ ++ +P+SDL F P+S E+ R+P RY++ E+EE++
Sbjct: 6 KQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQSKKTKLQAPTKKPANKGGKKEDEEIIK 65
Query: 101 QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAED 160
QA+CH+ +A VDG L NL DD YV G + +IA+++ELFE+ DG PY + RW+YR ED
Sbjct: 66 QAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRWYYRPED 125
Query: 161 TVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAT-NMDLEAKQKNIPPCDLYYD 219
T+I+ + LV KRVFLS+ E+ NPL CI SK IA+V + +Q+ IPPCD YYD
Sbjct: 126 TLIERFSHLVQPKRVFLSNDENGNPLTCIWSKVNIAKVPLPKITSRIEQRVIPPCDYYYD 185
Query: 220 MKYTLPHLTFLNINNESNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLC 279
MKY +P +LN + + D+ +S + S + + E LLDLYSGCGAMSTG C
Sbjct: 186 MKYEVP---YLNFTSADDGSDASSSLSSDSALNCFENLHKDEKFLLDLYSGCGAMSTGFC 242
Query: 280 IGASLS 285
+GAS+S
Sbjct: 243 MGASIS 248
>gi|15239810|ref|NP_199727.1| DNA (cytosine-5)-methyltransferase 1 [Arabidopsis thaliana]
gi|462650|sp|P34881.1|DNMT1_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase 1; AltName: Full=DNA
methyltransferase 01; AltName: Full=DNA methyltransferase
2; AltName: Full=DNA methyltransferase AthI; Short=DNA
Metase AthI; Short=M.AthI; AltName: Full=DNA
methyltransferase DDM2; AltName: Full=Protein DECREASED
DNA METHYLATION 2
gi|304107|gb|AAA32829.1| cytosine-5 methyltransferase [Arabidopsis thaliana]
gi|10177145|dbj|BAB10334.1| DNA (cytosine-5)-methyltransferase [Arabidopsis thaliana]
gi|332008394|gb|AED95777.1| DNA (cytosine-5)-methyltransferase 1 [Arabidopsis thaliana]
Length = 1534
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/356 (33%), Positives = 172/356 (48%), Gaps = 43/356 (12%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
+ + LPLPG VDFI GGPPCQG SG NRF Q++ ++ +L F+ +Y +P+Y L
Sbjct: 1179 QKSTLPLPGQVDFINGGPPCQGFSGMNRFN--QSSWSKVQCEMILAFLSFADYFRPRYFL 1236
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + F+ G + + L+ M YQ R GI+ AG+YG+ Q R R F+W A P + L
Sbjct: 1237 LENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAAAPEEVL 1296
Query: 556 PQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLE-KGVLLSDAISDLPLVTNNESEDE 614
P++P P H + + Q + A + + + + D I DLP V N +S
Sbjct: 1297 PEWPEPMHVFGVPKLKISLSQGLHYAAVRSTALGAPFRPITVRDTIGDLPSVENGDSRTN 1356
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
++Y VA + FQK IR L DH +N + R IP R
Sbjct: 1357 KEYKEVAVSWFQKEIR---------------GNTIALTDHICKAMNELNLIRCKLIPTRP 1401
Query: 675 GANFRDLPGVLVGPDNKVRWDPSMERVMLKSGK-----PL-VPDYAMKFEHQSSTKPFGR 728
GA++ DLP +V L G+ P +P+ A + H +GR
Sbjct: 1402 GADWHDLP---------------KRKVTLSDGRVEEMIPFCLPNTAER--HNGWKGLYGR 1444
Query: 729 LWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
L W T VT QP ++ HP Q R+LT+RE AR QGFPD Y+ G + +
Sbjct: 1445 LDWQGNFPTSVTDPQPMGKVGMCFHPEQHRILTVRECARSQGFPDSYEFAGNINHK 1500
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 25/180 (13%)
Query: 151 KARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAK--- 207
K R FYR ED V + A D + ++ S P + K ++ + ++M L +
Sbjct: 970 KVRRFYRPED-VSAEKAYASDIQELYFSQDTVVLPPGALEGKCEVRK-KSDMPLSREYPI 1027
Query: 208 QKNIPPCDLYYDM-KYTLPHL------TFLNINNES---NRRDSDASSTISSETGSNSPI 257
+I CDL++D K +L L F I +++ ++ S I SE P+
Sbjct: 1028 SDHIFFCDLFFDTSKGSLKQLPANMKPKFSTIKDDTLLRKKKGKGVESEIESEI--VKPV 1085
Query: 258 GQPE---MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
P+ ++ LD+++GCG +S GL A +S K WAI+ A ++ K NHPE+ V
Sbjct: 1086 EPPKEIRLATLDIFAGCGGLSHGL-KKAGVSDAK----WAIEYEEPAGQAFKQNHPESTV 1140
>gi|359486204|ref|XP_002268238.2| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Vitis
vinifera]
Length = 1238
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/349 (33%), Positives = 171/349 (48%), Gaps = 42/349 (12%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP PG VDFI GGPPCQG SG NRF Q ++ +L F+ +Y +P++ L+ENV
Sbjct: 893 LPRPGQVDFINGGPPCQGFSGMNRFN--QGKWSKMQCEMILAFLSFADYFRPRFFLLENV 950
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R + L+ M YQ R G++ AG+YG+PQ R R F+W A P + LP++P
Sbjct: 951 RNFVTFNKGQTFRLTLASLLEMGYQVRFGVLEAGAYGVPQSRRRAFIWAASPEETLPEWP 1010
Query: 560 LPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGT 619
P H + N + + + A P + + + DAI DLP + N E +Y
Sbjct: 1011 EPMHVFPGPELKINNYA-AVRSTATGGPF---RAITVRDAIGDLPNIGNGACETTMEYPR 1066
Query: 620 VARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFR 679
A + +Q+ R S+L DH ++N + R IPKR GA++
Sbjct: 1067 EASSWYQRKFR---------------GDMSILTDHISKKMNELNLIRCKKIPKRPGADWH 1111
Query: 680 DLPGVLVGPDNKVRWDPSMERVMLKSGK--PLVPDYAMK--FEHQSSTKPFGRLWWDEIV 735
+ + KVR L SG+ L+P + H GRL W+
Sbjct: 1112 AI------KNGKVR---------LSSGRIAKLLPSWLTNKGKRHNQWKGVLGRLDWEGHF 1156
Query: 736 NTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
T +T QP ++ HP QDR+L++RE AR QGFPD Y+ G + +
Sbjct: 1157 PTSITNPQPLGKVGMCFHPDQDRILSVRECARTQGFPDSYKFSGQMHHK 1205
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 150 FKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAT--NMDLEAK 207
K R F+R ED + + A L D + V+ S P+ I K ++ + + A+
Sbjct: 688 LKVRRFFRPED-ISAEKAHLSDIREVYYSTQIVVVPVMAIEGKCEVRKKHELPAFNAPAE 746
Query: 208 QKNIPPCDLYYD----MKYTLPHLTFLNINNESNRRDSDASSTISSETGSNSPIGQPEMS 263
++I C YD LP L +++ N +A+ + + ++
Sbjct: 747 FQHIFFCQSQYDPDTRAIKKLP--ARLKLSSSENMDTDEAACRKRTSECKGGECDKSRLA 804
Query: 264 LLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPET 312
LD+++GCG +S GL +GV L T+WAI+ A ++ NHP+
Sbjct: 805 TLDVFAGCGGLSEGL----QQAGVSL-TKWAIEYEEPAGEAFHLNHPDA 848
>gi|242022906|ref|XP_002431878.1| DNA cytosine-5,-methyltransferase, putative [Pediculus humanus
corporis]
gi|212517219|gb|EEB19140.1| DNA cytosine-5,-methyltransferase, putative [Pediculus humanus
corporis]
Length = 1330
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 125/402 (31%), Positives = 192/402 (47%), Gaps = 63/402 (15%)
Query: 423 CKEKLKEFVT---KGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQL 479
C LKE ++ K + LP G+VD ICGGPPCQG SG NRF + Q + KN +
Sbjct: 924 CNTLLKEVMSGKLKNDKGQCLPQKGEVDLICGGPPCQGFSGMNRFNSRQYS--QFKNSLV 981
Query: 480 LVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQ 539
+ F+ +Y +PKY ++ENV + + F + + + L+SM YQ G++ AG+YG+PQ
Sbjct: 982 VSFLSYCDYFRPKYFILENVRNFVAFKRSMVLKQTLYCLISMGYQCTFGVLQAGNYGIPQ 1041
Query: 540 FRLRVFLWGARPFKKLPQYPLPTHEIVARG-----VIPNEFQEIIVAYANNQPCQLEKGV 594
R R+F+ A P KLP +P PTH R + ++ ++ + P + +
Sbjct: 1042 TRRRLFILAAAPNLKLPLFPEPTHVFSLRASNLQVTVDDKRFTTNCKWSTSAPL---RTI 1098
Query: 595 LLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDH 654
+ DA+SDLP + N Y +T FQ+ IR + S+P +L DH
Sbjct: 1099 TVRDALSDLPEIPNGADRVVMNYNEDCKTHFQRLIRGNQ------------SQP-ILRDH 1145
Query: 655 RPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKV---------------------- 692
++ R+ IP KG+++RDLP + + +
Sbjct: 1146 TCKYMSPLVEARIRHIPTTKGSDWRDLPNISMTLSDGTTIKQLKYMHHDRKNGKSPQGYL 1205
Query: 693 ----------RWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA 742
R DP ++R +P A + H S +GRL WD +T VT
Sbjct: 1206 RGVCACASGRRCDP-LDRQYNTLIPWCLPHTANRHNHWSGL--YGRLEWDGYFSTTVTNP 1262
Query: 743 QPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+P + +LHP Q RV+++RE AR QGFPD +Q +GP+ E+
Sbjct: 1263 EPMGKQGRVLHPEQTRVVSVRECARSQGFPDSFQFYGPIIEK 1304
>gi|307106990|gb|EFN55234.1| hypothetical protein CHLNCDRAFT_52630 [Chlorella variabilis]
Length = 1211
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 137/237 (57%), Gaps = 17/237 (7%)
Query: 400 FKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVS 459
FKV + G ++ W K L E L+ FV K ++P PG+VDFICGGPPCQG+S
Sbjct: 497 FKVVMEAGGEQQEVWLSRKQLKGQDELLRGFVRKLRERQLIPFPGEVDFICGGPPCQGIS 556
Query: 460 GFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLV 519
G NR + L+D +NRQL VF+ E+ KPKYVLMENV DILK G +YA+G ++
Sbjct: 557 GNNRHAMTEDILQDPRNRQLPVFIAYSEWFKPKYVLMENVQDILKKEDGLYIKYAMGSML 616
Query: 520 SMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIV---------ARGV 570
+M YQ R+G++AAG++G+PQ R R FLW A P ++LP P PTH + ++
Sbjct: 617 NMRYQVRVGLLAAGNFGVPQGRWRCFLWAAAPGQQLPAIPKPTHNCIHFKAGSRRDSQAA 676
Query: 571 IP------NEFQEIIVAYANNQPCQLEKG--VLLSDAISDLPLVTNNESEDERKYGT 619
P N + + + +N+ C + VLL D SDLP V N E + R+Y T
Sbjct: 677 APRCCATANNAKRLTSGFVSNEDCTMNGHPPVLLGDIFSDLPEVDNFELHERRRYET 733
>gi|110740122|dbj|BAF01962.1| DNA (cytosine-5)-methyltransferase [Arabidopsis thaliana]
Length = 603
Score = 188 bits (478), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 120/356 (33%), Positives = 172/356 (48%), Gaps = 43/356 (12%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
+ + LPLPG VDFI GGPPCQG SG NRF Q++ ++ +L F+ +Y +P+Y L
Sbjct: 248 QKSTLPLPGQVDFINGGPPCQGFSGMNRFN--QSSWSKVQCEMILAFLSFADYFRPRYFL 305
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + F+ G + + L+ M YQ R GI+ AG+YG+ Q R R F+W A P + L
Sbjct: 306 LENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAAAPEEVL 365
Query: 556 PQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLE-KGVLLSDAISDLPLVTNNESEDE 614
P++P P H + + Q + A + + + + D I DLP V N +S
Sbjct: 366 PEWPEPMHVFGVPKLKISLSQGLHYAAVRSTALGAPFRPITVRDTIGDLPSVENGDSRTN 425
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
++Y VA + FQK IR L DH +N + R IP R
Sbjct: 426 KEYKEVAVSWFQKEIR---------------GNTIALTDHICKAMNELNLIRCKLIPTRP 470
Query: 675 GANFRDLPGVLVGPDNKVRWDPSMERVMLKSGK-----PL-VPDYAMKFEHQSSTKPFGR 728
GA++ DLP +V L G+ P +P+ A + H +GR
Sbjct: 471 GADWHDLP---------------KRKVTLSDGRVEEMIPFCLPNTAER--HNGWKGLYGR 513
Query: 729 LWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
L W T VT QP ++ HP Q R+LT+RE AR QGFPD Y+ G + +
Sbjct: 514 LDWQGNFPTSVTDPQPMGKVGMCFHPEQHRILTVRECARSQGFPDSYEFAGNINHK 569
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 25/180 (13%)
Query: 151 KARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAK--- 207
K R FYR ED V + A D + ++ S P + K ++ + ++M L +
Sbjct: 39 KVRRFYRPED-VSAEKAYASDIQELYFSQDTVVLPPGALEGKCEVRK-KSDMPLSREYPI 96
Query: 208 QKNIPPCDLYYDM-KYTLPHL------TFLNINNES---NRRDSDASSTISSETGSNSPI 257
+I CDL++D K +L L F I +++ ++ S I SE P+
Sbjct: 97 SDHIFFCDLFFDTSKGSLKQLPANMKPKFSTIKDDTLLRKKKGKGVESEIESEI--VKPV 154
Query: 258 GQPE---MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
P+ ++ LD+++GCG +S GL A +S K WAI+ A ++ K NHPE+ V
Sbjct: 155 EPPKEIRLATLDIFAGCGGLSHGL-KKAGVSDAK----WAIEYEEPAGQAFKQNHPESTV 209
>gi|290999391|ref|XP_002682263.1| cytosine-5 DNA methyltransferase [Naegleria gruberi]
gi|284095890|gb|EFC49519.1| cytosine-5 DNA methyltransferase [Naegleria gruberi]
Length = 1527
Score = 188 bits (478), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 178/711 (25%), Positives = 299/711 (42%), Gaps = 126/711 (17%)
Query: 102 ARCHYTQASVDGCLYNLGDDAYVKA---EEGAVDYIARIVELFESVDGEPYFKARWFYRA 158
R ++ + YN+GD Y+K YI + FE+ G+ + RW R
Sbjct: 717 GRKYFKSCKISKEEYNIGDFIYLKTPYLNHEMPYYICMVDSFFENWKGQRQMRVRWLRRY 776
Query: 159 EDTVI------KDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIP 212
+D I ++ C D + ++L+D DDN + I + + V D E + +
Sbjct: 777 QDIKILTTGEYHNVLCY-DHQELYLTDEYDDNFIKNIKGRCAVFFVRKTEDFEKIEGSRD 835
Query: 213 PCDLYY---------------DMKYTLPHLTFLNINNESNRRDSDASSTISSETGSNSPI 257
D++Y ++ LTF + N N + I
Sbjct: 836 KKDIFYCKSKIVIVGEQISLLELSPQEIELTFKCMENNLN-------------AIKDQFI 882
Query: 258 GQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNE 317
+ +++ LD++SGCG GL +G +G+ + +++I+ A + + + +
Sbjct: 883 PKEKITALDIFSGCG----GLSLGLERAGIHV--KYSIEFWKPAADTHHYYFKDCHTFCK 936
Query: 318 AADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEF 377
A++FL +K +L + F + D + S P +
Sbjct: 937 NAEEFLKHIKVANELKKRFGLLDKKCQIKGS------------------------PGKR- 971
Query: 378 EVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRS 437
R+I + + + K ++ V +G +D W ++ + + ++ F++ Y +
Sbjct: 972 ---RVIHI--KNAKRKKDGSLWLMVEKQG----QDLWMDVEKMDSYRAEIVHFLSTKYAN 1022
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAA--LEDIKNRQLLVFMDVIEYLKPKYVL 495
+P P ++D I GGPPCQG S NRF+ ++ L KNR +LVF+D ++Y KPKYVL
Sbjct: 1023 --IPAPDEIDLIAGGPPCQGFSLLNRFKETDSSKFLSHDKNRLVLVFLDYVKYFKPKYVL 1080
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFK-- 553
+ENV IL + + + +L + Y+ + + A +GLPQ R RV +GAR +
Sbjct: 1081 IENVTGILNTTVFDVPSAIIEKLDARGYEAKFSTVNAQHFGLPQTRTRVIFFGARKDENL 1140
Query: 554 KLPQYPLPTH-EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDL-PLVTNNES 611
K+P +P TH V+ N Q +VA V L D ISDL P ++ES
Sbjct: 1141 KVPDFPKNTHASHKVSAVLDNASQVKLVANVRKIVAGPLPPVSLRDVISDLIPFEDSSES 1200
Query: 612 EDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIP 671
E +T +QK R ++ S S L + C+P
Sbjct: 1201 TAEY---LPPKTVYQKLYRKDSDTCIDHISQSYGEVTSAL---------------IKCLP 1242
Query: 672 KRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWW 731
+ G NFRDL R +LK G D+ S RL W
Sbjct: 1243 RYPGCNFRDL--------------AESARPLLKEGYLTYRDF--------SKNILARLQW 1280
Query: 732 DEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+ T+VT P++ ++HP+Q RV+++RE AR QGFPD + G + ++
Sbjct: 1281 SKSCPTLVTHLNPYSMKVIHPNQHRVISVREAARCQGFPDDFIFTGSIHDK 1331
>gi|297739461|emb|CBI29643.3| unnamed protein product [Vitis vinifera]
Length = 460
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/349 (33%), Positives = 171/349 (48%), Gaps = 42/349 (12%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP PG VDFI GGPPCQG SG NRF Q ++ +L F+ +Y +P++ L+ENV
Sbjct: 115 LPRPGQVDFINGGPPCQGFSGMNRFN--QGKWSKMQCEMILAFLSFADYFRPRFFLLENV 172
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R + L+ M YQ R G++ AG+YG+PQ R R F+W A P + LP++P
Sbjct: 173 RNFVTFNKGQTFRLTLASLLEMGYQVRFGVLEAGAYGVPQSRRRAFIWAASPEETLPEWP 232
Query: 560 LPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGT 619
P H + N + + + A P + + + DAI DLP + N E +Y
Sbjct: 233 EPMHVFPGPELKINNYAA-VRSTATGGPF---RAITVRDAIGDLPNIGNGACETTMEYPR 288
Query: 620 VARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFR 679
A + +Q+ R S+L DH ++N + R IPKR GA++
Sbjct: 289 EASSWYQRKFR---------------GDMSILTDHISKKMNELNLIRCKKIPKRPGADWH 333
Query: 680 DLPGVLVGPDNKVRWDPSMERVMLKSGK--PLVPDYAMK--FEHQSSTKPFGRLWWDEIV 735
+ + KVR L SG+ L+P + H GRL W+
Sbjct: 334 AI------KNGKVR---------LSSGRIAKLLPSWLTNKGKRHNQWKGVLGRLDWEGHF 378
Query: 736 NTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
T +T QP ++ HP QDR+L++RE AR QGFPD Y+ G + +
Sbjct: 379 PTSITNPQPLGKVGMCFHPDQDRILSVRECARTQGFPDSYKFSGQMHHK 427
>gi|307111085|gb|EFN59320.1| hypothetical protein CHLNCDRAFT_137705 [Chlorella variabilis]
Length = 1369
Score = 186 bits (472), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 123/353 (34%), Positives = 178/353 (50%), Gaps = 48/353 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LPLPG+VDFICGGPPCQG SG NRF ++ ++N ++ F L P+Y L+ENV
Sbjct: 1017 LPLPGEVDFICGGPPCQGYSGMNRFNKGNWSM--VQNSMVMAF------LSPRYFLLENV 1068
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + + F R V L+ M YQ R G++ AG++G+ Q R R F+W A P + LP +P
Sbjct: 1069 RNFVSHNKSFTFRLTVRSLLDMGYQVRFGVLNAGNFGVAQSRKRTFIWAAAPGELLPDWP 1128
Query: 560 LPTHEIVARGV---IPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERK 616
H + +P Q V P + V + DAI+DLP + N +E +
Sbjct: 1129 KLMHCFRTPQLTINLPGGVQYRAVPQTVGAPL---RPVTVRDAIADLPEIENGHMVEEME 1185
Query: 617 YGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR-KG 675
Y + FQ+++ R D L+ DH Q+N + ER CIPK G
Sbjct: 1186 YVGGPVSAFQQHV---RGDCTQLT------------DHISKQMNELNLERCRCIPKNCPG 1230
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLV----PDYAMKFEHQSSTKPFGRLWW 731
A++R L + V+ DP E+ G+PLV P+ A + H FGRL W
Sbjct: 1231 ADWRVL-------EEIVKADPGREKF---KGQPLVPWCLPNTADR--HNGWRGLFGRLDW 1278
Query: 732 DEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+ T T QP ++ + HP QDR++++RE AR QGFPD ++ G V +
Sbjct: 1279 NGHFPTSTTDPQPMGKVGQVFHPEQDRIVSVRECARAQGFPDKHRFVGTVHNK 1331
>gi|147853569|emb|CAN82351.1| hypothetical protein VITISV_019436 [Vitis vinifera]
Length = 377
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 116/349 (33%), Positives = 171/349 (48%), Gaps = 42/349 (12%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP PG VDFI GGPPCQG SG NRF Q ++ +L F+ +Y +P++ L+ENV
Sbjct: 32 LPRPGQVDFINGGPPCQGFSGMNRFN--QGKWSKMQCEMILAFLSFADYFRPRFFLLENV 89
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R + L+ M YQ R G++ AG+YG+PQ R R F+W A P + LP++P
Sbjct: 90 RNFVTFNKGQTFRLTLASLLEMGYQVRFGVLEAGAYGVPQSRRRAFIWAASPEETLPEWP 149
Query: 560 LPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGT 619
P H + N + + + A P + + + DAI DLP + N E +Y
Sbjct: 150 EPMHVFPGPELKINNY-AAVRSTATGGPF---RAITVRDAIGDLPNIGNGACETTMEYPR 205
Query: 620 VARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFR 679
A + +Q+ R S+L DH ++N + R IPKR GA++
Sbjct: 206 EASSWYQRKFR---------------GDMSILTDHISKKMNELNLIRCKKIPKRPGADWH 250
Query: 680 DLPGVLVGPDNKVRWDPSMERVMLKSGK--PLVPDYAMK--FEHQSSTKPFGRLWWDEIV 735
+ + KVR L SG+ L+P + H GRL W+
Sbjct: 251 AI------KNGKVR---------LSSGRIAKLLPSWLTNKGKRHNQWKGVLGRLDWEGHF 295
Query: 736 NTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
T +T QP ++ HP QDR+L++RE AR QGFPD Y+ G + +
Sbjct: 296 PTSITNPQPLGKVGMCFHPDQDRILSVRECARTQGFPDXYKFSGQMHHK 344
>gi|15236318|ref|NP_193097.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|4678387|emb|CAB41119.1| DNA (cytosine-5-)-methyltransferase-like protein [Arabidopsis
thaliana]
gi|7268065|emb|CAB78403.1| DNA (cytosine-5-)-methyltransferase-like protein [Arabidopsis
thaliana]
gi|332657902|gb|AEE83302.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
Length = 1404
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/353 (32%), Positives = 172/353 (48%), Gaps = 49/353 (13%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
+ + LPLPG VDFI GGPPCQG S NRF + + + + +L F+ +Y +PKY L
Sbjct: 1066 QKSTLPLPGQVDFISGGPPCQGFSRLNRFSD--GSWSKNQCQMILAFLSFADYFRPKYFL 1123
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + F+ G V L+ M YQ R G++ AG+YG+ Q R R F+W A P + L
Sbjct: 1124 LENVKTFVSFNEGHTFHLTVASLLEMGYQVRFGLLEAGAYGISQPRKRAFIWAAAPNEVL 1183
Query: 556 PQYPLPTHEIVARGV-IPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
P++P P H G IP A + + + + + DAI DLP + + ES+
Sbjct: 1184 PEWPEPMHVFNNPGFKIPLSQGLHYAAVQSTKFGAPFRSITVRDAIGDLPPIESGESK-- 1241
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
++ +M ++L DH ++N + R IPK
Sbjct: 1242 ------------------------INKEEMRGSMTVLTDHICKKMNELNLIRCKKIPKTP 1277
Query: 675 GANFRDLPGVLVGPDNKVRWDPSMERVMLKSG--KPLVPDYAMKF-EHQSSTKPFGRLWW 731
GA++RDLP E V L +G K +VP+ K +H +GRL W
Sbjct: 1278 GADWRDLPD---------------EHVNLSNGIVKNIVPNLLNKAKDHNGYKGLYGRLDW 1322
Query: 732 DEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+ T +T QP + HP QDR++++RE AR QGFPD Y+ G +K++
Sbjct: 1323 HGNLPTCITNLQPMGLVGMCFHPDQDRIISVRECARSQGFPDSYKFSGNIKDK 1375
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 42/236 (17%)
Query: 117 NLGDDAYVKAEEGAVDYIARIVELFESVDGEPY---FKARWFYRAEDTVIKDLACLVDRK 173
N+G A+V V I IV+L E G K R FYR +D V + A D +
Sbjct: 819 NVGLRAFV------VCQILDIVDLKEPKKGNTTSFEVKVRRFYRPDD-VSAEEAYASDIQ 871
Query: 174 RVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQ---KNIPPCDLYYDMK----YTLPH 226
V+ S+ P I K ++ + T+M L + ++ CD +YD LP+
Sbjct: 872 EVYYSEDTYILPPEAIKGKCEVMK-KTDMPLCREYPILDHVYFCDRFYDSSNGCLKKLPY 930
Query: 227 ---LTFLNINNESNRRDSDASSTISSETGS-------NSPIGQPEMSLLDLYSGCGAMST 276
L F I +++ R+ +ETGS P G+ ++ LD+++GCG +S
Sbjct: 931 NMMLKFSTIKDDTLLREK------KTETGSAMLLKPDEVPKGK-RLATLDIFAGCGGLSY 983
Query: 277 GLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKL 332
GL +GV T+WAI+ A ++ K NHP+T V + + L + W +L
Sbjct: 984 GL----EKAGVS-DTKWAIEYEEPAAQAFKQNHPKTTVFVDNCNVILRI--SWLRL 1032
>gi|443691961|gb|ELT93682.1| hypothetical protein CAPTEDRAFT_160905 [Capitella teleta]
Length = 1334
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 183/380 (48%), Gaps = 56/380 (14%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP G+V+ +CGGPPCQG SG NRF + + ++ KN + ++ +Y +PK+ L+ENV
Sbjct: 873 LPQKGEVELLCGGPPCQGFSGMNRFNSREYSM--FKNSLIASYLSYCDYYRPKFFLLENV 930
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + A+ L+ M YQ G++ AG+YG+PQ R R + A P +KLP YP
Sbjct: 931 RNFVSFKRSMVLKLALRCLLRMGYQCTFGVLQAGNYGVPQTRRRAIILAAAPGEKLPFYP 990
Query: 560 LPTHEIVARGV-----IPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
P H RG+ + ++ V ++ P + + + DA+SDLP V N ++
Sbjct: 991 EPLHVFAPRGMQLSVQVGDKRYNSCVQRMSSAPF---RTISVRDAMSDLPEVKNGAKAEK 1047
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
Y A++ FQ+ IR +H Q R + D P + R+ IP
Sbjct: 1048 ISYSVEAQSHFQRMIRGHQH--------QPVCRDHICKDFNPLV-----HARMQHIPLYP 1094
Query: 675 GANFRDLPGVLV----------------------GPDNKVRW-----DPSMERVMLKSGK 707
GA++RDLP + V P +R D M +
Sbjct: 1095 GADWRDLPNIEVRLSDGSKCKKLCYTHRDKKNGRSPSGALRGVCQCADSGSCDAMDRQFN 1154
Query: 708 PLVPDYAMKF---EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRE 762
L+P + + H +GRL WD +T VT +P + +LHP Q RV+++RE
Sbjct: 1155 TLIP-WCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRE 1213
Query: 763 NARLQGFPDCYQLFGPVKER 782
AR QGFPD Y+ FG +++R
Sbjct: 1214 CARSQGFPDTYRFFGNIQDR 1233
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 95 EEEEVLQA--RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFK 151
E E VL+ + Y A ++G + ++GD VK ++ + YIA+I +E DG F
Sbjct: 395 EGEPVLKKSKKTFYASARLNGEILSVGDYVSVKPDDPSTPVYIAQIKYFYEDSDGTMMFH 454
Query: 152 ARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
A+W+ R DTV+ + + D K +F+ D + L V K+
Sbjct: 455 AQWYSRGSDTVLGEAS---DPKELFVVDECQNTQLAFCVEAVKV 495
>gi|297600571|ref|NP_001049442.2| Os03g0226800 [Oryza sativa Japonica Group]
gi|255674328|dbj|BAF11356.2| Os03g0226800, partial [Oryza sativa Japonica Group]
Length = 130
Score = 182 bits (463), Expect = 5e-43, Method: Composition-based stats.
Identities = 79/108 (73%), Positives = 92/108 (85%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
G VD ICGGPPCQG+SGFNRFR LED KN+QL+VFMD+++YL+PKYVLMENVVDIL
Sbjct: 4 GAVDVICGGPPCQGISGFNRFRKHNDPLEDEKNKQLVVFMDIVKYLRPKYVLMENVVDIL 63
Query: 504 KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
KF+ GFL RYA+ LV+M+YQ RLG+MAAG YGLPQFR+R FLWGA P
Sbjct: 64 KFADGFLGRYAMSCLVAMNYQARLGMMAAGYYGLPQFRMRAFLWGALP 111
>gi|147801050|emb|CAN77846.1| hypothetical protein VITISV_020830 [Vitis vinifera]
Length = 272
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/134 (64%), Positives = 100/134 (74%), Gaps = 1/134 (0%)
Query: 649 SLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKP 708
S+LYDH P +N DDY RVC IPK+KGANFRDLPGV+VG +N R DP E + L SGK
Sbjct: 84 SVLYDHLPLPLNEDDYLRVCRIPKKKGANFRDLPGVVVGANNVARRDPKTE-MELPSGKQ 142
Query: 709 LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQG 768
+VPDYA+ F STKPF RLWWDE V TV+T+ PH + LHP QDRVLT+RE+ARLQG
Sbjct: 143 MVPDYALNFSEGKSTKPFARLWWDETVPTVLTKPDPHCQAYLHPEQDRVLTVRESARLQG 202
Query: 769 FPDCYQLFGPVKER 782
FPD Y+ G VKER
Sbjct: 203 FPDYYKFCGQVKER 216
>gi|340373134|ref|XP_003385097.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Amphimedon
queenslandica]
Length = 1444
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 185/397 (46%), Gaps = 61/397 (15%)
Query: 427 LKEFVTKGYRSN----ILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L V +G ++N +LP GDV+ +CGGPPCQG SG NRF + + + KN ++ +
Sbjct: 1039 LLSLVMEGAKTNSRGQLLPQKGDVELLCGGPPCQGFSGMNRFNSREYS--QFKNSLVISY 1096
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ EY +P++ L+ENV + + F + + + LV M YQ G++ AG YG+PQ R
Sbjct: 1097 LSFCEYYRPRFFLLENVRNFVSFKKSMVLKLTLRCLVKMGYQCTFGVLQAGQYGVPQTRR 1156
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARG----VIPNEFQEIIVAYANNQPCQLEKGVLLSD 598
R + A P +KLP +P PTH R V+ N+ + ++ P + + + D
Sbjct: 1157 RAIILAAAPGEKLPHFPNPTHVFSPRACQLTVVVNDIKYEGSIRMDSAP---YRTITVRD 1213
Query: 599 AISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQ 658
++SDLP + N + Y +Q+ +R +H V LYDH +
Sbjct: 1214 SMSDLPHIKNGSAVRSMNYNGEPHCHYQRLMRGNQHQPV-------------LYDHICKE 1260
Query: 659 VNNDDYERVCCIPKRKGANFRDLP--------GVLVGPDNKVRWDPSMERVMLKS----- 705
+N R+ IP G+++RDLP G D R KS
Sbjct: 1261 MNPLVAARMRFIPIGPGSDWRDLPNKCIRLSDGTTAPKLQYTHHDKKNGRAKNKSLRGVC 1320
Query: 706 ----GKP--------------LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR 747
G+P +P + H + +GRL WD +T VT +P +
Sbjct: 1321 PCATGQPCDSSYRQYGTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGK 1378
Query: 748 I--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+LHP Q RV+++RE AR QGFPD ++ FG + ++
Sbjct: 1379 QGRVLHPEQHRVVSVRECARSQGFPDTFRFFGTILDK 1415
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 13/109 (11%)
Query: 93 LNEEEEVLQARCHYTQASVDG----CLYNLGDDAYVKAEEGAVD--YIARIVELFESVDG 146
+ E + V + +YT+ ++ CLY D E D Y+ RI+ ++E +G
Sbjct: 548 IGEPDFVEGGKSYYTEVLINNKEKVCLY----DVVSVCPEVPDDPLYLTRIMSMYEDSNG 603
Query: 147 EPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
+ F WF+R+ DTV+ + D + +FL D +DNPL I+ K ++
Sbjct: 604 KKMFHGWWFHRSTDTVLGETG---DPRELFLIDDCEDNPLGAIMDKVEV 649
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Query: 261 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAAD 320
++ +LD+++GCG +S G +GV + WA++I+ A ++ + N+ +T V + +
Sbjct: 983 KLRMLDVFAGCGGLSEGF----HQAGVA-DSCWAVEIDEPAAQAFRLNNSQTTVFTDDCN 1037
Query: 321 DFLSLLKEWAK 331
LSL+ E AK
Sbjct: 1038 ILLSLVMEGAK 1048
>gi|384244928|gb|EIE18425.1| S-adenosyl-L-methionine-dependent methyltransferase, partial
[Coccomyxa subellipsoidea C-169]
Length = 468
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 182/367 (49%), Gaps = 54/367 (14%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP PG+VDF+CGGPPCQG SG NRF +L ++N ++ ++ ++ +P+Y L+ENV
Sbjct: 91 LPAPGEVDFLCGGPPCQGYSGMNRFNKGTWSL--VQNSMVMAYLSYADFYRPRYFLLENV 148
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRL------------------GIMAAGSYGLPQFR 541
+ + + R + L+ M YQ RL G++ AG++G+ Q R
Sbjct: 149 RNFVSHNKSHAFRLTLRSLLDMGYQARLLISIPLALGIWECEQVRFGVLNAGNFGVSQSR 208
Query: 542 LRVFLWGARPFKKLPQYPLPTHEIVARGV---IPNEFQEIIVAYANNQPCQLEKGVLLSD 598
R F+WG P +LPQ+P P H + + +P + V + P + V + D
Sbjct: 209 KRTFIWGVAPDNELPQWPAPLHVFHSPQLTIKLPGGVEYTAVPKGSGAPL---RTVTVKD 265
Query: 599 AISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQ 658
AI DLP +TN + ++ +Y + FQK IR ++L+DH +
Sbjct: 266 AIGDLPPLTNGANLEDMQYAGPPISAFQKAIR---------------GGCTVLHDHICKE 310
Query: 659 VNNDDYERVCCIPKRK-GANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKF 717
+N + ER CIPK GA++R L ++ ++ + P + + P+ A +
Sbjct: 311 MNELNLERCRCIPKNTPGADWRVLQEIVAANPDRTLFKPLVPWCL--------PNTADR- 361
Query: 718 EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQL 775
H FGRL + T VT QP ++ + HP QDR++++RE AR QGFPD ++
Sbjct: 362 -HNGWRGLFGRLDYGGHFPTSVTDPQPMGKVGQVFHPDQDRIVSVRECARAQGFPDSFRF 420
Query: 776 FGPVKER 782
+G V +
Sbjct: 421 YGNVHNK 427
>gi|242023477|ref|XP_002432160.1| DNA methyltransferase, putative [Pediculus humanus corporis]
gi|212517542|gb|EEB19422.1| DNA methyltransferase, putative [Pediculus humanus corporis]
Length = 1161
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 200/410 (48%), Gaps = 79/410 (19%)
Query: 421 SKCKEKLKEFV---TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNR 477
S C LKE + T N P G+V+F+CGGPPCQG S NRF + + N
Sbjct: 748 SDCNFFLKEVLSGKTFDKDGNRYPEKGEVEFLCGGPPCQGFSTMNRFTTKEES--QYNNS 805
Query: 478 QLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGL 537
++ ++ +Y +PK+ L+ENV + L F ++ + LV+M YQ G++ AG+YGL
Sbjct: 806 LIITYLSFCDYYRPKFFLLENVKNFLSFKKSLFFKHVLSCLVTMGYQCSFGVLQAGNYGL 865
Query: 538 PQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEK----- 592
PQ R R+F+ A P +LP +P PTH V G + N E+ Y N + C+ K
Sbjct: 866 PQSRRRLFILAAAPGYRLPFFPKPTH--VFYGSLKNFDSEM--NYTNFR-CRFSKTLSPS 920
Query: 593 ----GVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRP 648
V + DAI DLP V + K + + T +Q++++ + V
Sbjct: 921 APFRNVTVRDAIFDLPPV----GKASNKNFSSSPTSYQRFLKTSSYSV------------ 964
Query: 649 SLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVM------ 702
+DH +++ + R+ IP KG ++RDLP + V ++R D ++ ++
Sbjct: 965 ---HDHITKEISPLNEARIRHIPASKGCDWRDLPNIQV----RLR-DGTLTNLLKYSYHD 1016
Query: 703 ----------------LKSGKP----------LVPDYAMKFEHQSS--TKPFGRLWWDEI 734
SGK L+P + ++++ + +GRL WD +
Sbjct: 1017 RKNGKSCCGLLRGVCSCASGKSCTPKARQNNTLIPWFLAHTANRNNNWSGLYGRLDWDGV 1076
Query: 735 VNTVVTRAQPHNR--ILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
NTV T +P N+ +LHP +DR++TIRE+AR QG PD ++ +G V ++
Sbjct: 1077 FNTVTTNPEPSNQQGKVLHPEEDRIITIRESARAQGMPDSFKFYGAVADK 1126
>gi|383852983|ref|XP_003702004.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Megachile
rotundata]
Length = 1698
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 188/381 (49%), Gaps = 58/381 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP G V+ +CGGPPCQG SG NRF + Q +L KN ++ ++ +Y +PK+ +MENV
Sbjct: 1246 LPQKGQVELLCGGPPCQGFSGMNRFNSRQYSL--FKNSLVVSYLSYCDYYRPKFFIMENV 1303
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + + LV M YQ GI+ AG+YG+PQ R R+ + A P + LP+YP
Sbjct: 1304 RNFVSFKKSMVLKLTLRCLVRMGYQCTFGILQAGNYGVPQTRRRMVILAAAPGQTLPKYP 1363
Query: 560 LPTHEIVARG-----VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
PTH R ++ N+ ++ ++ P + + + DA+ DLP + N +++E
Sbjct: 1364 EPTHVFSKRACQLSVLVDNKKYSSNCSWIDSAP---YRTITVKDAMFDLPEIKNGWNKEE 1420
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
Y + + FQ+ +R +++ V L DH ++ R+ IP
Sbjct: 1421 MPYNSEPLSHFQRKMRGKQYQPV-------------LRDHICKEMAPLVEGRMAHIPIAS 1467
Query: 675 GANFRDLPGVLV----GPDNKVRWDPSMERVMLKS-------------GKP--------- 708
G+++RDLP + + G +K P ++ KS GKP
Sbjct: 1468 GSDWRDLPNITIRLSDGTYSKKLEYPYDDKKAGKSSTGAYRGVCSCCNGKPCDPTDRQFN 1527
Query: 709 -----LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIR 761
+P + H S +GRL WD +T +T +P + +LHP + RV+++R
Sbjct: 1528 TLIPWCLPHTGNRHNHWSGL--YGRLEWDGFFSTTITNPEPMGKQGRVLHPVETRVVSVR 1585
Query: 762 ENARLQGFPDCYQLFGPVKER 782
E AR QGFPD ++ +G + ++
Sbjct: 1586 ECARSQGFPDSFRFYGSILDK 1606
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 13/101 (12%)
Query: 133 YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSK 192
++A+I+ ++E+ +G F A WF+R DT++ + + D +FLSD DD P + SK
Sbjct: 799 HVAKIIYMWETKNGLKQFHANWFHRGTDTILGETS---DPIELFLSDDCDDVPFKSVKSK 855
Query: 193 AKIA---------EVA-TNMDLEAKQKNIPPCDLYYDMKYT 223
+ E+ TN+ LE + K++ +Y +YT
Sbjct: 856 CTVHFKKAPENWDEIGNTNLSLEDEIKDVDGKTFFYQKRYT 896
>gi|283549176|ref|NP_001164521.1| DNA methyltransferase 1a [Nasonia vitripennis]
Length = 1349
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 185/381 (48%), Gaps = 58/381 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP G+VD +CGGPPCQG SG NRF + +L KN ++ ++ +Y +P++ +MENV
Sbjct: 951 LPQRGEVDLLCGGPPCQGFSGMNRFNSRAYSL--FKNSLVVSYLSYCDYYRPRFFIMENV 1008
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + + L+ M YQ GI+ AG+YG+PQ R R+ + A P + LP+YP
Sbjct: 1009 RNFVTFKKSMVLKLTLRCLIRMGYQCTFGILQAGNYGVPQTRRRMIILAAAPGEVLPKYP 1068
Query: 560 LPTHEIVARG-----VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
P H VI N+ + + P ++ + DA+SDLP + + ++ED
Sbjct: 1069 NPLHVFSKSACNLSVVIDNKKYFPTYDWVESAPYKV---TTIRDALSDLPSIKSGKNEDV 1125
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
YG+ + FQ+ +R D SLL DH + R+ IP
Sbjct: 1126 MSYGSEPLSHFQRKLRAGVSD-------------SLLLDHICKDLGPLVEARMAHIPTVS 1172
Query: 675 GANFRDLPGVLV-----GPDNKVRWDPSMERVMLKSGKPL-------------------- 709
G+++RDLP +++ NK++++ ++ S L
Sbjct: 1173 GSDWRDLPNIVIPLSDGNHTNKLKYNYHDKKAGKSSTGALRGVCSCCTGKECNPLDRQDN 1232
Query: 710 ------VPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIR 761
+P + H + +GR+ WD +T +T +P + +LHP Q RV+++R
Sbjct: 1233 TLIPWCLPHTGNRHNHWAGL--YGRIEWDGFFSTTITNPEPMGKQGRVLHPDQTRVVSVR 1290
Query: 762 ENARLQGFPDCYQLFGPVKER 782
E AR QGFPD ++ +G ++++
Sbjct: 1291 ECARSQGFPDNFRFYGNIQDK 1311
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 149 YFKARWFYRAEDTVIKD-LACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAK 207
+ K + YR E+T + + D ++ S+ E P C+V K + + N+D+ +
Sbjct: 753 HIKVKKLYRPENTFKSESMKGRSDLNMLYWSEEEVTLPFTCVVGKCYLT-YSENLDISVE 811
Query: 208 QKNIP-PCDLYYDMKYT---------------LPHLTFLNINNESNRRDSDASSTISSET 251
+ + P Y+ Y+ + L + +S + +DA I +
Sbjct: 812 EWTVAGPNRFYFTQMYSHKEEEFDEPPSKACSIGKLIKKSDKIKSKSKKADAPKLI--DI 869
Query: 252 GSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPE 311
+ P + ++ LD+++GCG +S GL +GV + WAI+++ A + + N+P
Sbjct: 870 PPDFPQIKKKLRTLDVFAGCGGLSEGL----HQAGVA-ESSWAIEVDEAAAHAYRLNNPN 924
Query: 312 TKVRNEAADDFL 323
V + +L
Sbjct: 925 AAVFTGDCNAYL 936
>gi|68655475|emb|CAJ01709.1| chromomethylase 2 [Hordeum vulgare subsp. vulgare]
Length = 187
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 101/132 (76%)
Query: 651 LYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLV 710
LYDHRP + ND+Y RV IPK+KGANFRDLPGV+VGPDN + DP+ ERV+L SG+PLV
Sbjct: 6 LYDHRPLALGNDNYLRVLQIPKKKGANFRDLPGVVVGPDNVAKLDPTKERVLLPSGRPLV 65
Query: 711 PDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFP 770
D + +E +PFGRLWWDE+V TV+T H + L+HP+QDR+LT+RE+ARLQGFP
Sbjct: 66 LDCILTYEDGRCLRPFGRLWWDEVVGTVLTCPNIHMQALIHPAQDRLLTVRESARLQGFP 125
Query: 771 DCYQLFGPVKER 782
D Y+ G VK+R
Sbjct: 126 DSYRFRGTVKDR 137
>gi|350422372|ref|XP_003493144.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Bombus
impatiens]
Length = 1368
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 181/381 (47%), Gaps = 58/381 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP G V+ +CGGPPCQG SG NRF + Q +L KN ++ ++ +Y +P + +MENV
Sbjct: 966 LPQKGQVELLCGGPPCQGFSGMNRFNSRQYSL--FKNSLVVSYLSYCDYYRPNFFIMENV 1023
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + + LV M YQ GI+ AG+YG+PQ R R+ + A P + LPQYP
Sbjct: 1024 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGILQAGNYGVPQTRRRIIILAAAPGQILPQYP 1083
Query: 560 LPTHEIVARG-----VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
PTH R ++ N+ ++ + P + + + DA+ DLP + N +++E
Sbjct: 1084 EPTHVFSKRACQLSVLVDNKKYSTNCSWTESAPF---RTISVRDALFDLPEIKNGWNKEE 1140
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
Y A + FQ+ IR +++ LL DH ++ R+ IP
Sbjct: 1141 MSYTNDAISHFQRRIRGKQYQ-------------PLLRDHICKEMAPLVETRIAHIPVAS 1187
Query: 675 GANFRDLPGVL--------------------VGPDNKVRWDPSMERVMLKSGKP------ 708
G+++RDLP + VG + + M K P
Sbjct: 1188 GSDWRDLPNITVRLSDGTYSKKLEYTHDDKKVGKSSTGAYRGVCSCCMGKQCDPTDKQFN 1247
Query: 709 -----LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIR 761
+P + H + +GRL W+ +T +T +P + +LHP Q RV+++R
Sbjct: 1248 TLIPWCLPHTGNRHNHWAGL--YGRLEWNGFFSTTITNPEPMGKQGRVLHPVQTRVVSVR 1305
Query: 762 ENARLQGFPDCYQLFGPVKER 782
E AR QGFPD ++ +G + ++
Sbjct: 1306 ECARSQGFPDSFRFYGTILDK 1326
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 15/102 (14%)
Query: 133 YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSK 192
++A+++ ++E+ +G F A W +R DT++ + + D +FLSD DD P + SK
Sbjct: 519 HVAKVIYMWENKNGIKQFHANWLHRGNDTILGETS---DPIELFLSDDCDDVPFKSVRSK 575
Query: 193 AKI---------AEVATNMDLEAKQ--KNIPPCDLYYDMKYT 223
+ AE+ NMDL ++ K++ +Y +YT
Sbjct: 576 CTVIFKNVPKNWAELG-NMDLNSENEIKDLDGKTFFYQKRYT 616
>gi|321469202|gb|EFX80183.1| hypothetical protein DAPPUDRAFT_346987 [Daphnia pulex]
Length = 1400
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 189/392 (48%), Gaps = 73/392 (18%)
Query: 437 SNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLM 496
+LP V+ +CGGPPCQG SG NRF + Q + +N ++ ++ +Y +P++ ++
Sbjct: 994 GQVLPPKDGVELLCGGPPCQGFSGMNRFNSRQYS--SFRNSLIVSYLSYCDYYRPRFFIL 1051
Query: 497 ENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP 556
ENV + + F + + + LV M YQ G++ AG+YG+ Q R R F++ A P +KLP
Sbjct: 1052 ENVRNFVSFKRNMVLKLTMRCLVRMGYQCTFGVLQAGNYGVSQTRRRAFIFAAAPGEKLP 1111
Query: 557 QYPLPTHEIVARGVIPNEFQEIIVAYANNQ---PCQL-----EKGVLLSDAISDLPLVTN 608
YP PTH RG ++ VA ++ C+ + V + DA+SDLP + N
Sbjct: 1112 LYPEPTHVFSRRGC------QLSVAVGRDKFYSNCRWLLSAPYRTVTVRDAMSDLPEIPN 1165
Query: 609 NESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVC 668
++E YG ++ FQ+++R + + S+L DH ++ R+
Sbjct: 1166 GAKQEEISYGGDPQSHFQRWMR-----------GTDSEQSSVLRDHISKEMAPLVEARIA 1214
Query: 669 CIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVML------KSGKPLVPDYAMKF----- 717
IP + G+++RDL P+ +VR + V L K+G+ L AM+
Sbjct: 1215 FIPSKPGSDWRDL------PNTEVRLKDGVMTVKLRYTHEDKNGRSL--SGAMRGVCSCA 1266
Query: 718 -------------------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LL 750
H + +GRL WD +T +T +P + +L
Sbjct: 1267 EGRQCDPLDKQHNTLIPWCLPHTGNRHNNWAGLYGRLEWDGFFSTTITNPEPMGKQGRVL 1326
Query: 751 HPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
HP Q RV+++RE AR QGFPD Y+ FG + ++
Sbjct: 1327 HPEQHRVVSVRECARSQGFPDSYRFFGNITDK 1358
Score = 42.7 bits (99), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 262 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADD 321
+ LD+++GCG +S GL SGV T WAI+ P A ++ + N+P+ V + +
Sbjct: 926 LKTLDIFAGCGGLSEGL----HQSGVA-KTYWAIECEPTAAQAFRLNNPDAAVFTDDCNT 980
Query: 322 FLSL 325
L +
Sbjct: 981 ILKM 984
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Query: 67 DSDLFFVSPPVSADEALKRYPDRYKALNEEEEVLQARCHYTQASVDGCLYNL-GDDAYVK 125
D+++ VS V + +KR+ + + E + + Y+ A V+G + G ++
Sbjct: 487 DTEIEVVSLDVDHKKPVKRHAYKIEWDGPELKEVDDLTFYSAAIVNGDMRVFAGGHVTIE 546
Query: 126 AEEGAVD-YIARIVELFE-SVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVED 182
++ ++ YIA ++ L+E GE + ARWF R DTV+ + C R+ V + D ED
Sbjct: 547 PDDPSIPMYIAEVIALWEDGKSGEQFLHARWFCRGTDTVLGE-TCDDPRELVLIEDCED 604
>gi|112983430|ref|NP_001036980.1| DNA cytosine-5 methyltransferase [Bombyx mori]
gi|54888739|dbj|BAD67189.1| DNA cytosine-5 methyltransferase [Bombyx mori]
Length = 1409
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 184/388 (47%), Gaps = 72/388 (18%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP+ G+V+ +CGGPPCQG SG NRF + + + + KN + ++ +Y +PKY ++ENV
Sbjct: 1018 LPMQGEVELLCGGPPCQGFSGMNRFNSREYS--NFKNSLVASYLSFCDYYRPKYFILENV 1075
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F G + + + L+ M YQ GI+ AG+YG+PQ R R+ + A P LP YP
Sbjct: 1076 RNFVAFKKGMVLKLTLRALLDMGYQCTFGILQAGNYGVPQTRRRLIILAAAPGYNLPFYP 1135
Query: 560 LPTHEIVARG-----VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
PTH R I + + + + P ++ + DA+SDLP + N ++ E
Sbjct: 1136 EPTHVFSRRACTLTTTIDGKRFSTNIHWDESAP---KRTCTIQDAMSDLPQICNGANKIE 1192
Query: 615 RKYGTVARTEFQKYIR-------LRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERV 667
+YG++ + FQ+ +R LR H N++ A R+
Sbjct: 1193 IEYGSMPESHFQRLVRSNDENSKLRDHICKNMAPLIQA--------------------RI 1232
Query: 668 CCIPKRKGANFRDLPGVLV----GPDNKV---RWDPSMER----------VMLKSGK--- 707
IP G+++RDLP + V G KV R+D SG+
Sbjct: 1233 SRIPTTPGSDWRDLPNISVTLSDGTKCKVLQYRYDDKRNGRSSSGAVRGVCACASGRACS 1292
Query: 708 PL-----------VPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQ 754
PL +P + H + +GRL W +T VT +P + +LHP Q
Sbjct: 1293 PLDKQENTLIPWCLPHTGNRHNHWAGL--YGRLSWGGYFSTTVTDPEPMGKQGRVLHPDQ 1350
Query: 755 DRVLTIRENARLQGFPDCYQLFGPVKER 782
RV+++RE AR QGFPD Y G V+++
Sbjct: 1351 HRVVSVRECARSQGFPDTYLFAGSVQDK 1378
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 36/174 (20%)
Query: 34 HQQQEEQREDEEVKEEPVELVTRVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKAL 93
+QQ E+++D+ PV+L K +L ++ PV AD
Sbjct: 497 YQQISEKKQDKIDDAVPVKLTGSNSK---------NLKWIGEPVKAD------------- 534
Query: 94 NEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAV-DYIARIVELFESVDG--EPYF 150
+ +Y + +DG GD ++ + + +A++V +++ + YF
Sbjct: 535 -------ATKIYYEKVEIDGAELCNGDFVMIETSQTNIPTLVAKVVYMWKEIHNPKSGYF 587
Query: 151 KARWFYRAEDTVIKDLACLVDRKRVFLSD-VEDDNPLNCIVSKAKIAEVATNMD 203
F RA DTV+ +++ D + VFL D PL+ I+ KA I T+ D
Sbjct: 588 HGEVFIRASDTVLGEVS---DPREVFLGDRCCHGAPLSSILRKANIERKETSAD 638
>gi|383862947|ref|XP_003706944.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Megachile
rotundata]
Length = 1440
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 180/380 (47%), Gaps = 56/380 (14%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP G+V+ +CGGPPCQG SG NRF + Q +L KN ++ + +Y +PK+ +MENV
Sbjct: 1045 LPQKGEVELLCGGPPCQGFSGMNRFNSRQYSL--FKNSLVVSCLSYCDYYRPKFFIMENV 1102
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + + LV M YQ GI+ AG+YG+PQ R R+ + A P + LP+YP
Sbjct: 1103 RNFVSFKKSMVLKLTLRCLVRMGYQCTFGILQAGNYGIPQTRRRLIILAAAPGEVLPKYP 1162
Query: 560 LPTHEIVARG-----VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
PTH R ++ N+ + + P + + + DA+SDLP + N +++E
Sbjct: 1163 EPTHVFSKRACQLSVIVDNKKYSSNCDWTESAP---YRTISVRDAMSDLPNIRNGWNKEE 1219
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
YG + FQ+ IR + D + R + D P R+ IP
Sbjct: 1220 IAYGDEPISHFQRKIRPKEPDAI--------LRDHICKDMAPLV-----EARIAHIPTAS 1266
Query: 675 GANFRDLPGVLVGPDNKVRWDPSMERVM--LKSGK-------------------PLVPDY 713
G+++RDLP + V + + +E KSGK P+ Y
Sbjct: 1267 GSDWRDLPNIAVRLSDGT-YSKKLEYTHNDKKSGKSSTGALRGVCNCSAGKICDPMDRQY 1325
Query: 714 AMKF---------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRE 762
H +GRL WD T +T +P + +LHP Q RV+++RE
Sbjct: 1326 NTLIPWCLPHTGKRHNQWAGLYGRLEWDGFFGTTITNPEPMGKQGRVLHPEQTRVVSVRE 1385
Query: 763 NARLQGFPDCYQLFGPVKER 782
AR QGFPD ++ +G + ++
Sbjct: 1386 CARSQGFPDSFRFYGNILDK 1405
Score = 39.7 bits (91), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 13/100 (13%)
Query: 134 IARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKA 193
+A+++ ++E G A WF R DTV+ + + D +FL D D+ P I SKA
Sbjct: 594 VAKVMYMWEDKSGAKLCHANWFRRGSDTVLGETS---DPLELFLLDECDNVPFTSIKSKA 650
Query: 194 KIAEVA----------TNMDLEAKQKNIPPCDLYYDMKYT 223
+ A T++ LE + +N +Y KYT
Sbjct: 651 TVLYKASPNNWSELGNTDIPLEDEIQNKDGKTFFYQKKYT 690
>gi|357626147|gb|EHJ76342.1| DNA cytosine-5 methyltransferase [Danaus plexippus]
Length = 1363
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 180/379 (47%), Gaps = 54/379 (14%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
+P+ G+V+ +CGGPPCQG SG NRF + + + + KN + ++ ++ +PKY ++ENV
Sbjct: 975 IPMQGEVELLCGGPPCQGFSGMNRFNSREYS--NFKNSLVASYLSFCDFYRPKYFILENV 1032
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F G + + + L+ M YQ GI+ AG+YG+PQ R R+ + A P KLP YP
Sbjct: 1033 RNFVAFKKGMVLKLTLRALLDMGYQCTFGILQAGNYGVPQTRRRLIILAAAPGYKLPLYP 1092
Query: 560 LPTHEIVARG-----VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
PTH R I + + + + P + + DA+SDLP + N + E
Sbjct: 1093 EPTHVFSRRACSLTTTIDGKRFVTNIQWDESAP---RRTCTIQDAMSDLPQICNGANRIE 1149
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
YG + T FQ+ IR R + L DH + R+ IP
Sbjct: 1150 IDYGCMPETYFQRLIRSR-------------DESAKLRDHICKNMAPLIQARMSRIPTTP 1196
Query: 675 GANFRDLPGVLV----GPDNKV---RWD--------PSMERVMLKSGKPLVPDYAMKFE- 718
G+++RDLP + V G KV R+D R + V A K E
Sbjct: 1197 GSDWRDLPNISVALSDGTKCKVLQYRYDDIKNGRSTSGALRGVCACSAGGVCSVADKQEN 1256
Query: 719 -------------HQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIREN 763
H + +GR+ WD +T VT +P + +LHP Q+RV+++RE
Sbjct: 1257 TLIPWCLPHTANRHNNWAGLYGRISWDGYFSTTVTDPEPMGKQGRVLHPEQNRVVSVREC 1316
Query: 764 ARLQGFPDCYQLFGPVKER 782
AR QGFPD Y G ++++
Sbjct: 1317 ARSQGFPDTYLFAGSIQDK 1335
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
Query: 102 ARCHYTQASVDGCLYNLGDDAYVKAEEGAV-DYIARIVELF-ESVDGEP-YFKARWFYRA 158
+ +Y + +DG +LGD V+ + + +AR+ ++ ES++ + YF A F R+
Sbjct: 491 TKVYYEKVEIDGSELSLGDFVMVETSQSNIPALVARVTYMWKESINPKSGYFHAEVFIRS 550
Query: 159 EDTVIKDLACLVDRKRVFLSD-VEDDNPLNCIVSKAKIAEVATNMD 203
DTV+ ++ D + VFL D PL+ I+ KA + + T D
Sbjct: 551 SDTVLGEVG---DPREVFLGDRCCHGAPLSSILRKAFVEKKETPAD 593
>gi|72091983|ref|XP_780273.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like isoform 1
[Strongylocentrotus purpuratus]
Length = 1618
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 191/400 (47%), Gaps = 59/400 (14%)
Query: 423 CKEKLKEFVTKGYRSN----ILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQ 478
C E L+ V +G +++ LP GDV+ +CGGPPCQG SG NRF + + + KN
Sbjct: 1189 CNELLR-LVMQGDKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYS--KFKNSL 1245
Query: 479 LLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLP 538
+ ++ +Y +P++ L+ENV + + + + + A+ L+ M YQ GI+ AG YG+P
Sbjct: 1246 ISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGVP 1305
Query: 539 QFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLE--KGVLL 596
Q R R + A P +KLP YP P H R + +NNQ C + + +
Sbjct: 1306 QTRRRAIILAAAPGEKLPFYPEPLHVFSPRACSLSVMIGDKKIQSNNQWCLSAPYRTISV 1365
Query: 597 SDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRP 656
D++SDLP ++N + E Y +++FQK IR ++ + L DH
Sbjct: 1366 RDSMSDLPTISNGAQKLEISYDGEPQSDFQKKIRGNQYQPI-------------LRDHMC 1412
Query: 657 FQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDN-----KVRW----------------- 694
++ R+ IP G+++RDLP + V + K+R+
Sbjct: 1413 KDMSALVAARMKHIPLAPGSDWRDLPNIPVPLKDGTTCRKLRYTHRDTKSGKLSTGALKG 1472
Query: 695 ----------DPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQP 744
DPS +R +P + H + +GRL WD +T VT +P
Sbjct: 1473 VCSCAEGEACDPS-DRQFSTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEP 1529
Query: 745 HNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+ +LHP Q RV+++RE AR QGFPD Y+ FG + ++
Sbjct: 1530 MGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGSILDK 1569
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 93 LNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFK 151
+ E EEV + R Y A +D GD + ++ +IAR++ +++ DGE F
Sbjct: 730 IGEPEEVTKDRAFYKAAMIDDQKIENGDCVQIHPDDPTKPLFIARVIYMWQDSDGEMMFH 789
Query: 152 ARWFYRAEDTVI 163
A+WF +TV+
Sbjct: 790 AQWFVYGSETVL 801
>gi|23306230|emb|CAD43077.1| DNA methyltransferase 1a [Paracentrotus lividus]
Length = 1461
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 192/402 (47%), Gaps = 63/402 (15%)
Query: 423 CKEKLKEFVTKGYRSN----ILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQ 478
C E L+ V +G +++ LP GDV+ +CGGPPCQG SG NRF + + + KN
Sbjct: 1032 CNELLR-LVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYS--KFKNSL 1088
Query: 479 LLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLP 538
+ ++ +Y +P++ L+ENV + + + + + A+ L+ M YQ GI+ AG YG+P
Sbjct: 1089 ISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGVP 1148
Query: 539 QFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLE--KGVLL 596
Q R R + A P +KLP YP P H R + +NNQ C + + +
Sbjct: 1149 QTRRRAIILAAAPGEKLPFYPEPLHVFSTRACSLSVMIGEKKIESNNQWCLSAPYRTITV 1208
Query: 597 SDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRP 656
D++SDLP + N + E Y +++FQK IR ++ +L DH
Sbjct: 1209 RDSMSDLPTINNGAQKLEISYDGEPQSDFQKKIRGNQYQ-------------PILSDHIC 1255
Query: 657 FQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDN-----KVRW----------------- 694
+++ R+ IP G+++RDLP + V + K+R+
Sbjct: 1256 KDMSSLVAARMKHIPLAPGSDWRDLPNIPVTLKDGTTCRKLRYTHRDKKNGKSSTGALRG 1315
Query: 695 ----------DPSMER--VMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA 742
DPS + ++ P ++ H + +GRL WD +T VT
Sbjct: 1316 VCSCAEGDACDPSDRQFSTLIPWCLPHTGNW-----HNNWAGLYGRLEWDGFFSTTVTNP 1370
Query: 743 QPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+P + +LHP Q RV+++RE AR QGFPD Y+ FG + ++
Sbjct: 1371 EPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGSILDK 1412
>gi|390363610|ref|XP_003730410.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like
[Strongylocentrotus purpuratus]
Length = 1618
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 191/400 (47%), Gaps = 59/400 (14%)
Query: 423 CKEKLKEFVTKGYRSN----ILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQ 478
C E L+ V +G +++ LP GDV+ +CGGPPCQG SG NRF + + + KN
Sbjct: 1189 CNELLR-LVMQGDKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYS--KFKNSL 1245
Query: 479 LLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLP 538
+ ++ +Y +P++ L+ENV + + + + + A+ L+ M YQ GI+ AG YG+P
Sbjct: 1246 ISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGVP 1305
Query: 539 QFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLE--KGVLL 596
Q R R + A P +KLP YP P H R + +NNQ C + + +
Sbjct: 1306 QTRRRAIILAAAPGEKLPFYPEPLHVFSPRACSLSVMIGDKKIQSNNQWCLSAPYRTISV 1365
Query: 597 SDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRP 656
D++SDLP ++N + E Y +++FQK IR ++ + L DH
Sbjct: 1366 RDSMSDLPTISNGAQKLEISYDGEPQSDFQKKIRGNQYQPI-------------LRDHMC 1412
Query: 657 FQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDN-----KVRW----------------- 694
++ R+ IP G+++RDLP + V + K+R+
Sbjct: 1413 KDMSALVAARMKHIPLAPGSDWRDLPNIPVPLKDGTTCRKLRYTHRDTKSGKLSTGALKG 1472
Query: 695 ----------DPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQP 744
DPS +R +P + H + +GRL WD +T VT +P
Sbjct: 1473 VCSCAEGEACDPS-DRQFSTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEP 1529
Query: 745 HNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+ +LHP Q RV+++RE AR QGFPD Y+ FG + ++
Sbjct: 1530 MGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGSILDK 1569
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 93 LNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFK 151
+ E EEV + R Y A +D GD + ++ +IAR++ +++ DGE F
Sbjct: 730 IGEPEEVTKDRAFYKAAMIDDQKIENGDCVQIHPDDPTKPLFIARVIYMWQDSDGEMMFH 789
Query: 152 ARWFYRAEDTVI 163
A+WF +TV+
Sbjct: 790 AQWFVYGSETVL 801
>gi|110765384|ref|XP_001122269.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI [Apis mellifera]
Length = 1427
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 174/379 (45%), Gaps = 54/379 (14%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP G+V+ +CGGPPCQG SG NRF + Q +L KN ++ + +Y +PK+ +MENV
Sbjct: 1028 LPQKGEVELLCGGPPCQGFSGMNRFNSRQYSL--FKNSLVVSCLSYCDYYRPKFFIMENV 1085
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + + LV M YQ GI+ AG+YG+PQ R R+ + A P + LP+YP
Sbjct: 1086 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGILQAGNYGIPQTRRRLIILAAAPGEVLPKYP 1145
Query: 560 LPTHEIVARG-----VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
PTH R ++ N+ + + P + + + DA+SDLP + N + +E
Sbjct: 1146 EPTHVFSKRACQLSVIVDNKKYSSNCDWTESAP---YRTISVRDAMSDLPNIRNGWNNEE 1202
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
Y + FQ+ +R + D + R + D P R+ IP
Sbjct: 1203 IAYSDEPISHFQRKVRPKEPDAI--------LRDHICKDMAPLV-----EARIAHIPTAS 1249
Query: 675 GANFRDLPGVLV--------------------GPDNKVRWDPSMERVMLKSGKPLVPDYA 714
G+++RDLP + V G + M K P+ Y
Sbjct: 1250 GSDWRDLPNITVRLSDGTYSKKLEYMYHDKKAGKSSTGALRGVCSCCMGKMCDPIARQYN 1309
Query: 715 MKF---------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIREN 763
H +GRL WD T +T +P + +LHP Q RV+++RE
Sbjct: 1310 TLIPWCLPHTGKRHNHWAGLYGRLEWDGFFGTTITNPEPMGKQGRVLHPEQTRVVSVREC 1369
Query: 764 ARLQGFPDCYQLFGPVKER 782
AR QGFPD ++ +G + ++
Sbjct: 1370 ARSQGFPDSFRFYGNILDK 1388
>gi|12230342|sp|Q27746.1|DNMT1_PARLI RecName: Full=DNA (cytosine-5)-methyltransferase PliMCI; AltName:
Full=DNA methyltransferase PliMCI; Short=DNA MTase
PliMCI; Short=M.PliMCI; AltName: Full=Dnmt1; AltName:
Full=MCMT
gi|1004286|emb|CAA90563.1| DNA (cytosine-5-)-methyltransferase [Paracentrotus lividus]
Length = 1612
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 191/400 (47%), Gaps = 59/400 (14%)
Query: 423 CKEKLKEFVTKGYRSN----ILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQ 478
C E L+ V +G +++ LP GDV+ +CGGPPCQG SG NRF + + + KN
Sbjct: 1183 CNELLR-LVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYS--KFKNSL 1239
Query: 479 LLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLP 538
+ ++ +Y +P++ L+ENV + + + + + A+ L+ M YQ GI+ AG YG+P
Sbjct: 1240 ISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGVP 1299
Query: 539 QFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLE--KGVLL 596
Q R R + A P +KLP YP P H +R + +NNQ C + + +
Sbjct: 1300 QTRRRAIILAAAPGEKLPFYPEPLHVFSSRACSLSVMIGEKKIESNNQWCLSAPYRTITV 1359
Query: 597 SDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRP 656
D +SDLP + N + E Y +++FQK IR ++ +L DH
Sbjct: 1360 RDTMSDLPTINNGAQKLEISYDGEPQSDFQKKIRGNQYQ-------------PILRDHIC 1406
Query: 657 FQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDN-----KVRW----------------- 694
+++ R+ IP G+++RDLP + V + K+R+
Sbjct: 1407 KDMSSLVAARMKHIPLAPGSDWRDLPNIPVTLKDGTTCRKLRYTHKDKKNGKSSTGALRG 1466
Query: 695 ----------DPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQP 744
DPS +R +P + H + +GRL WD +T VT +P
Sbjct: 1467 VCSCAEGDACDPS-DRQFSTLIPWCLPHTGNR--HNNWAGLYGRLEWDGFFSTTVTNPEP 1523
Query: 745 HNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+ +LHP Q RV+++RE AR QGFPD Y+ FG + ++
Sbjct: 1524 MGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGSILDK 1563
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 93 LNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFK 151
L+E EV + R +Y A +D +GD + ++ ++AR++ +++ GE F
Sbjct: 722 LDEPTEVTEERAYYKAAMLDDEKIEIGDCVLIHPDDPTKPLFMARVIYMWQESQGEMMFH 781
Query: 152 ARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
A+WF +TV+ + + D VF D D L + +K +
Sbjct: 782 AQWFVYGSETVLGETS---DPLEVFPIDECQDTYLGSVNAKCTV 822
>gi|23306229|emb|CAD42182.3| DNA methyltransferase [Paracentrotus lividus]
Length = 1613
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 192/402 (47%), Gaps = 63/402 (15%)
Query: 423 CKEKLKEFVTKGYRSN----ILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQ 478
C E L+ V +G +++ LP GDV+ +CGGPPCQG SG NRF + + + KN
Sbjct: 1184 CNELLR-LVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYS--KFKNSL 1240
Query: 479 LLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLP 538
+ ++ +Y +P++ L+ENV + + + + + A+ L+ M YQ GI+ AG YG+P
Sbjct: 1241 ISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGVP 1300
Query: 539 QFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLE--KGVLL 596
Q R R + A P +KLP YP P H R + +NNQ C + + +
Sbjct: 1301 QTRRRAIILAAAPGEKLPFYPEPLHVFSTRACSLSVMIGEKKIESNNQWCLSAPYRTITV 1360
Query: 597 SDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRP 656
D++SDLP + N + E Y +++FQK IR ++ +L DH
Sbjct: 1361 RDSMSDLPTINNGAQKLEISYDGEPQSDFQKKIRGNQYQ-------------PILSDHIC 1407
Query: 657 FQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDN-----KVRW----------------- 694
+++ R+ IP G+++RDLP + V + K+R+
Sbjct: 1408 KDMSSLVAARMKHIPLAPGSDWRDLPNIPVTLKDGTTCRKLRYTHRDKKNGKSSTGALRG 1467
Query: 695 ----------DPSMER--VMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA 742
DPS + ++ P ++ H + +GRL WD +T VT
Sbjct: 1468 VCSCAEGDACDPSDRQFSTLIPWCLPHTGNW-----HNNWAGLYGRLEWDGFFSTTVTNP 1522
Query: 743 QPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+P + +LHP Q RV+++RE AR QGFPD Y+ FG + ++
Sbjct: 1523 EPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGSILDK 1564
>gi|182765469|ref|NP_001116832.1| uncharacterized protein LOC100036795 [Xenopus laevis]
gi|171846414|gb|AAI61682.1| LOC100036795 protein [Xenopus laevis]
Length = 1492
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 186/404 (46%), Gaps = 74/404 (18%)
Query: 427 LKEFVTKGYRSNIL----PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L + V G ++N L P GDV+ +CGGPPCQG SG NRF + KN ++ +
Sbjct: 1071 LLKLVMSGEKTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSY 1128
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ +Y +PK+ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R
Sbjct: 1129 LSYCDYYRPKFFLLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRR 1188
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVAR----GVIPNEFQEIIVAYANNQPCQLEKGVLLSD 598
R + A P +KLP +P P H R GV+ +E + V+ L + + + D
Sbjct: 1189 RAIVLAAAPGEKLPMFPEPLHVFAPRACSLGVVVDE--KKYVSNITRTSSSLFRTITVRD 1246
Query: 599 AISDLPLVTNNESEDERKYGTVARTEFQKYIR-------LRRHDVVNLSSAQMASRPSLL 651
+SDLP + N S E Y ++ FQ+ IR LR H +LS+ A
Sbjct: 1247 TMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQPILRDHICKDLSALVAA------ 1300
Query: 652 YDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLV-----GPDNKVRWDPSMERVMLKS- 705
R+ IP G+++RDLP + V K+R+ ++ S
Sbjct: 1301 --------------RMRHIPLAPGSDWRDLPNMEVRLSDGTTSRKLRYSHHDKKNGRSSN 1346
Query: 706 -----------GKP--------------LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVT 740
GKP +P + H + +GRL WD +T VT
Sbjct: 1347 GALRGVCSCAEGKPCDPADRQFSTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVT 1404
Query: 741 RAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+P + +LHP Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 1405 NPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDK 1448
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 246 TISSETGS---NSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHAC 302
T+SS++ + NS P++ LD++SGCG +S G +G+ T WAI++ A
Sbjct: 997 TLSSKSENEQINSGDKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETNWAIEMWEPAA 1051
Query: 303 KSLKFNHPETKVRNEAADDFLSLL 326
++ + N+P T V E + L L+
Sbjct: 1052 QAFRLNNPGTTVFTEDCNVLLKLV 1075
>gi|345482937|ref|XP_001600175.2| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI [Nasonia
vitripennis]
Length = 1404
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 181/384 (47%), Gaps = 63/384 (16%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP G+VD +CGGPPCQG SG NRF + A KN ++ F+ +Y KP++ LMENV
Sbjct: 1001 LPKKGEVDLLCGGPPCQGFSGMNRFNS--RAYSSFKNSLIVSFISFCDYYKPRFFLMENV 1058
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + + L M YQ GI+ AGSYG+PQ R R+ L A P + LP++P
Sbjct: 1059 RNFVSFKKSAVLKLTLSCLSRMGYQCTFGILQAGSYGIPQTRRRMILIAAAPGEILPRFP 1118
Query: 560 LPTHEIVARGVIPNEFQEIIV--------AYANNQPCQLEKGVLLSDAISDLPLVTNNES 611
P H V ++ V + + + + + DA+SDLP + + +
Sbjct: 1119 NPLH------VFSKSTCQLTVDVDNVKYFTFTDVHESAPYRAITVYDALSDLPKIKSGSN 1172
Query: 612 EDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIP 671
E +Y T FQ+ +R D + LYDH + R+ IP
Sbjct: 1173 EVVMRYENDPLTHFQRKMRSGMDDEL------------ALYDHICKDLGPLVEARMGLIP 1220
Query: 672 KRKGANFRDLPGVLV-----GPDNKVRWDPSMERVMLKS-GKP----------------- 708
+ G+++RDLP ++V K+ + + ++ + S G P
Sbjct: 1221 TKTGSDWRDLPNIVVRLSDGTCTTKLEYKYNDKKAGVSSTGAPRGICSCSEGKSCSLRDK 1280
Query: 709 --------LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVL 758
+P A + H + +GR+ WD +T +T +P + +LHP Q RV+
Sbjct: 1281 QVNTLIPWCLPHTANRHNHWAGL--YGRIEWDGFFSTTITNPEPMGKQGRVLHPEQTRVV 1338
Query: 759 TIRENARLQGFPDCYQLFGPVKER 782
++RE AR QGFPD ++ +G ++++
Sbjct: 1339 SVRECARSQGFPDSFRFYGSIQDK 1362
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 20/189 (10%)
Query: 149 YFKARWFYRAEDTVI-KDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAK 207
Y + YR E+T + L D ++ SD E D LNCIV K IA + N++ +
Sbjct: 804 YVTVKKMYRPENTHRGESLKKKSDMNMLYWSDEECDVRLNCIVGKCYIA-YSENLNQSIE 862
Query: 208 QKNIP-PCDLY----YDM---KYTLPHLTFLNINNESNRRDSDASSTISSETG-SNSPIG 258
+ + P Y YD+ +YT P ++ + S + ET + P+
Sbjct: 863 EWSASGPHRFYFSEAYDLNNEEYTEPPAHACSVTKSFKKDVKAKSKSKKVETIIEDIPVS 922
Query: 259 QPEMS----LLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
P++S LD+++GCG +S GL +GV + WAI+ + A + + N+P+ V
Sbjct: 923 LPQISHKLRTLDVFAGCGGLSEGL----KQAGVA-ESLWAIENDTAAAHAYRLNNPKASV 977
Query: 315 RNEAADDFL 323
+ FL
Sbjct: 978 FTTDCNSFL 986
>gi|307193684|gb|EFN76367.1| DNA (cytosine-5)-methyltransferase 1 [Harpegnathos saltator]
Length = 1460
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 184/380 (48%), Gaps = 58/380 (15%)
Query: 441 PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVV 500
P G+V+ +CGGPPCQG SG NRF Q +L KN ++ + ++Y +PK+ +MENV
Sbjct: 1009 PQKGEVELLCGGPPCQGFSGMNRFNLRQYSL--FKNSLVVSCLSYLDYYRPKFFVMENVR 1066
Query: 501 DILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPL 560
+ + F + + + LV M YQ GI+ AG+YG+PQ R R+ + A P + LP YP
Sbjct: 1067 NFVTFKRSMVLKLTLCCLVRMGYQCTFGILQAGNYGVPQTRRRLIILAAAPGETLPCYPE 1126
Query: 561 PTHEIVARG-----VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
PT+ R V+ N A+ + P + + + DA+SDLP + N +++E
Sbjct: 1127 PTNVFTRRCCRLSVVVDNRKYSSNCAWKESAPF---RTISVRDAMSDLPPIKNGWNKEEM 1183
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
YG + FQ+ +R +++ +L DH ++ R+ IP G
Sbjct: 1184 PYGNEPMSHFQRKVRGKQYQ-------------PMLRDHICKEMAPIIEARIAHIPTASG 1230
Query: 676 ANFRDLPGVLVGPD-----NKVRWDPSMERVMLKS------------GKP---------- 708
+++RDLP +++ NK+ + +R S G+P
Sbjct: 1231 SDWRDLPNIVLQLSDNTFANKLEYTYHDKRAGESSISALRGVCSCCTGRPCDPTDKQFNT 1290
Query: 709 ----LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRE 762
+P + H S +GRL WD +T VT +P + +LHP Q RV+++RE
Sbjct: 1291 LIPWCLPHTGNRHNHWSGL--YGRLEWDGFFSTTVTNPEPMGKQGRVLHPVQTRVVSVRE 1348
Query: 763 NARLQGFPDCYQLFGPVKER 782
AR QGF D ++ +G V ++
Sbjct: 1349 CARSQGFRDMFRFYGTVHDK 1368
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 12/130 (9%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
R Y V L D V+ A+ +IA+++ ++E+ G F A W R DT
Sbjct: 530 RTFYKSVMVGNEKIELNDYVLVEPRNSAIPLHIAKVMYMWENKIGIKQFHANWVRRGTDT 589
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAT--------NMDLEAKQKNIPP 213
++ + A D VFLSD +D P + SKA + T NMD+ K+
Sbjct: 590 ILGETA---DPMEVFLSDDCEDVPFKSVNSKATVLHKKTPEDWSKLGNMDINDTIKDTDG 646
Query: 214 CDLYYDMKYT 223
+Y M+YT
Sbjct: 647 KTFFYKMRYT 656
>gi|260806879|ref|XP_002598311.1| hypothetical protein BRAFLDRAFT_204680 [Branchiostoma floridae]
gi|229283583|gb|EEN54323.1| hypothetical protein BRAFLDRAFT_204680 [Branchiostoma floridae]
Length = 1275
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 186/395 (47%), Gaps = 56/395 (14%)
Query: 427 LKEFVTKGYRSNI----LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L + V +G +N LP GDV+ +CGGPPCQG SG NRF + Q + KN ++ F
Sbjct: 854 LLKLVMEGATTNSTGQRLPQKGDVELLCGGPPCQGFSGMNRFNSRQYS--QFKNSLVVSF 911
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ ++ +PK+ L+ENV + + F + + + L+ M YQ G++ AG+YG+ Q R
Sbjct: 912 LSYCDFYRPKFFLLENVRNFVSFKSSMVLKLTLRCLIRMGYQCTFGVLQAGNYGVAQTRR 971
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLE--KGVLLSDAI 600
R + A P +KLP YP P H R + + +N Q Q + + + D +
Sbjct: 972 RAIILAAAPGEKLPMYPEPQHVFSPRACQLSVMVDEKKYNSNTQWRQSAPYRTITIRDTM 1031
Query: 601 SDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVN 660
SDLP + N S E Y R+ FQK IR ++ +L DH +N
Sbjct: 1032 SDLPSIRNGHSATEISYDGEPRSYFQKIIRGNQYQ-------------PILRDHICKDMN 1078
Query: 661 NDDYERVCCIPKRKGANFRDLPGVLV----GPDNK-VRWDPSMERVMLKSGKPL------ 709
R+ +P G+++RDLP ++V G +K +++ ++ S L
Sbjct: 1079 ALVEARMRHVPLAPGSDWRDLPNIVVRLSDGSSSKLLQYTHEDKKNGTSSTGALRGVCSC 1138
Query: 710 --------------------VPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI- 748
+P + H + +GRL WD +T VT +P +
Sbjct: 1139 AEGTACDQNDRQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQG 1196
Query: 749 -LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+LHP Q RV+++RE AR QGFPD Y+ +G + ++
Sbjct: 1197 RVLHPEQHRVVSVRECARSQGFPDTYRFYGSILDK 1231
>gi|37039880|gb|AAM96952.1| DNA cytosine-5-methyltransferase [Prunus persica]
Length = 1564
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/354 (32%), Positives = 164/354 (46%), Gaps = 43/354 (12%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LPLPG VDFI GGPPC+G SG NRF Q+ + + + +Y +PK +E
Sbjct: 1212 NDLPLPGQVDFINGGPPCRGFSGMNRF--TQSPWIKFHCKMIWACLAFADYFRPKLFPLE 1269
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + F+ G + + L+ M YQ R GI+ AG+YG+ Q R R F+W A P + LP+
Sbjct: 1270 NVRKFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGISQSRKRAFIWAAAPEEVLPE 1329
Query: 558 YPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLE-KGVLLSDAISDLPLVTNNESEDERK 616
+P P H + + Q + A + + + + D I DLP V N +S ++
Sbjct: 1330 WPEPMHVFGVPKLKISLSQGLHYAAVRSTALGAPFRPITVRDTIGDLPSVENGDSRTNKE 1389
Query: 617 YGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGA 676
Y VA + FQK IR L DH +N + R IP R GA
Sbjct: 1390 YKEVAVSWFQKEIR---------------GNTIALTDHICKAMNELNLIRCKLIPTRPGA 1434
Query: 677 NFRDLPGVLVGPDNKVRWDPSMERVMLKSGK-----PL-VPDYAMKFEHQSSTKPFGRLW 730
++ DLP +V L G+ P +P+ A + H +GRL
Sbjct: 1435 DWHDLP---------------KRKVTLSDGRVEEMTPFCLPNTAER--HNGWKGLYGRLD 1477
Query: 731 WDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
W T VT QP ++ H Q R+LT+RE AR QGFPD Y+ G + +
Sbjct: 1478 WQGNFPTSVTDPQPMGKVGMCFHLEQHRILTVRECARSQGFPDSYEFAGNINHK 1531
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 259 QPEMSLLDLYSGCGAMSTGL-CIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
Q ++ LD+++GCG +S GL GAS +T+WAI+ A + K NHPE+ V
Sbjct: 1121 QKRLATLDIFAGCGGLSNGLRQSGAS------ITKWAIEYEEPAGDAFKLNHPESLV 1171
>gi|350410581|ref|XP_003489082.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Bombus
impatiens]
Length = 1441
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 178/380 (46%), Gaps = 56/380 (14%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP G+V+ +CGGPPCQG SG NRF + Q +L KN + + +Y +PK+ +MENV
Sbjct: 1040 LPQKGEVELLCGGPPCQGFSGMNRFNSRQYSL--FKNSLVASCLSYCDYYRPKFFIMENV 1097
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + + LV M YQ GI+ AG+YG+PQ R R+ + A P + LP+YP
Sbjct: 1098 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGILQAGNYGIPQTRRRLIILAAAPGEVLPKYP 1157
Query: 560 LPTHEIVARG-----VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
PTH R ++ N+ + + P + + + DA+SDLP + N + +E
Sbjct: 1158 EPTHVFSKRACQLSVIVDNKKYSSNCDWIESAP---YRTISVRDAMSDLPNIRNGWNTEE 1214
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
Y + FQ+ +R + D + R + D P R+ IP
Sbjct: 1215 MAYSDEPISHFQRKVRPKEPDAI--------LRDHICKDMAPLV-----EARIAHIPTAS 1261
Query: 675 GANFRDLPGVLVGPDNKVRWDPSMERVML--KSGK-------------------PLVPDY 713
G+++RDLP + V + + +E + K+GK P+ Y
Sbjct: 1262 GSDWRDLPNIAVRLSDGT-YSKKLEYLYHDKKAGKSSTGAHRGVCSCCAGKMCDPMARQY 1320
Query: 714 AMKF---------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRE 762
H +GRL WD T +T +P + +LHP Q RV+++RE
Sbjct: 1321 NTLIPWCLPHTGRRHNHWAGLYGRLEWDGFFGTTITNPEPMGKQGRVLHPEQTRVVSVRE 1380
Query: 763 NARLQGFPDCYQLFGPVKER 782
AR QGFPD ++ +G + ++
Sbjct: 1381 CARSQGFPDTFRFYGNILDK 1400
>gi|301609669|ref|XP_002934384.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Xenopus (Silurana)
tropicalis]
Length = 1492
Score = 172 bits (436), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 184/397 (46%), Gaps = 60/397 (15%)
Query: 427 LKEFVTKGYRSNIL----PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L + V G ++N L P GDV+ +CGGPPCQG SG NRF + KN ++ +
Sbjct: 1071 LLKLVMSGEKTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSY 1128
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ +Y +PKY L+ENV + + F + + + LV M YQ G++ AG YG+ Q R
Sbjct: 1129 LSYCDYYRPKYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRR 1188
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARG----VIPNEFQEIIVAYANNQPCQLEKGVLLSD 598
R + A P +KLP +P P H R V+ +E + + N L + + + D
Sbjct: 1189 RAIVLAAAPGEKLPMFPEPLHVFAPRACSLSVVVDEKKYVSNITRTNS--SLFRTITVRD 1246
Query: 599 AISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQ 658
+SDLP + N S E Y ++ FQ+ IR ++ + L DH
Sbjct: 1247 TMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQPI-------------LRDHVCKD 1293
Query: 659 VNNDDYERVCCIPKRKGANFRDLPGVLV-----GPDNKVRWDPSMER------------V 701
++ R+ IP G+++RDLP + V K+R+ ++
Sbjct: 1294 MSALVAARMRHIPLAPGSDWRDLPNMEVRLSDGTTTRKLRYSHHDKKNGRSSTGALRGVC 1353
Query: 702 MLKSGKP--------------LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR 747
GKP +P + H + +GRL WD +T VT +P +
Sbjct: 1354 SCSEGKPCDPADRQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGK 1411
Query: 748 I--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+LHP Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 1412 QGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDK 1448
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 260 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 319
P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V E
Sbjct: 1014 PKLRTLDVFSGCGGLSEGF----HQAGIS-ETNWAIEMWEPAAQAFRLNNPGTTVFTEDC 1068
Query: 320 DDFLSLL 326
+ L L+
Sbjct: 1069 NVLLKLV 1075
>gi|16755863|gb|AAL28119.1|AF433678_1 putative chromomethylase MTH1 [Triticum aestivum]
Length = 107
Score = 172 bits (435), Expect = 9e-40, Method: Composition-based stats.
Identities = 75/103 (72%), Positives = 86/103 (83%)
Query: 449 ICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGG 508
+CGGPPCQG+SG NRFRN LED +N+QL+VFMDV+ YL+PKYVLMENVVDILKF+ G
Sbjct: 2 VCGGPPCQGISGLNRFRNYNEPLEDDRNKQLVVFMDVVNYLRPKYVLMENVVDILKFADG 61
Query: 509 FLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
FL RYA+ RLVSM YQ RLG+M AG YGLPQFR+R FL GA P
Sbjct: 62 FLGRYALSRLVSMRYQARLGLMVAGCYGLPQFRMRAFLGGALP 104
>gi|340719551|ref|XP_003398214.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Bombus
terrestris]
Length = 1442
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 179/380 (47%), Gaps = 56/380 (14%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP G+V+ +CGGPPCQG SG NRF + Q +L KN ++ + +Y +PK+ +MENV
Sbjct: 1041 LPQKGEVELLCGGPPCQGFSGMNRFNSRQYSL--FKNSLVVSCLSYCDYYRPKFFIMENV 1098
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + + L+ M YQ GI+ AG+YG+PQ R R+ + A P + LP+YP
Sbjct: 1099 RNFVSFKRSMVLKLTLRCLLRMGYQCTFGILQAGNYGIPQTRRRLIILAAAPGEVLPKYP 1158
Query: 560 LPTHEIVARG-----VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
PTH R ++ N+ + + P + + + DA+SDLP + N + +E
Sbjct: 1159 EPTHVFSKRACQLSVIVDNKKYSSNCDWIESAP---YRTISVRDAMSDLPNIRNGWNTEE 1215
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
Y + FQ+ +R + D + R + D P R+ IP
Sbjct: 1216 MAYSDEPISHFQRKVRPKEPDAI--------LRDHICKDMAPLV-----EARIAHIPTAS 1262
Query: 675 GANFRDLPGVLVGPDNKVRWDPSMERVML--KSGK-------------------PLVPDY 713
G+++RDLP + V + + +E + K+GK P+ Y
Sbjct: 1263 GSDWRDLPNIAVRLSDGT-YSKKLEYLYHDKKAGKSSIGAHRGVCSCCAGKMCDPIARQY 1321
Query: 714 AMKF---------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRE 762
H +GRL WD T +T +P + +LHP Q RV+++RE
Sbjct: 1322 NTLIPWCLPHTGRRHNHWAGLYGRLEWDGFFGTTITNPEPMGKQGRVLHPEQTRVVSVRE 1381
Query: 763 NARLQGFPDCYQLFGPVKER 782
AR QGFPD ++ +G + ++
Sbjct: 1382 CARSQGFPDSFRFYGNILDK 1401
>gi|209978474|gb|ACJ04671.1| DNA methyltransferase 1 [Carassius auratus]
Length = 1503
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 186/395 (47%), Gaps = 56/395 (14%)
Query: 427 LKEFVTKGYRSNIL----PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L + V G ++N L P GDV+ +CGGPPCQG SG NRF + KN + +
Sbjct: 1081 LLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSAFKNSLAVSY 1138
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ +Y +PK+ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R
Sbjct: 1139 LSYCDYYRPKFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRR 1198
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARGVIPNEF--QEIIVAYANNQPCQLEKGVLLSDAI 600
R + A P +KLP++P P H R P+ ++ V+ + + + + D +
Sbjct: 1199 RAIILAAAPGEKLPRFPEPLHVFAPRACSPSVVVDEKRYVSNVTRGNGGIYRTITVRDTM 1258
Query: 601 SDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVN 660
SDLP + N + E Y ++ FQ++IR ++ +L DH ++
Sbjct: 1259 SDLPEIRNGAAALEISYNGEPQSWFQRHIRGSQYQ-------------PILRDHICKDMS 1305
Query: 661 NDDYERVCCIPKRKGANFRDLPGVLV----GPDN-KVRWDPSMER------------VML 703
R+ IP G+++RDLP + V G + K+R+ + ++
Sbjct: 1306 ALVAARMRHIPLAPGSDWRDLPNIEVRLRDGTNTKKLRYTHADKKNGRSGTGALRGVCSC 1365
Query: 704 KSGKP--------------LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI- 748
GKP +P + H + +GRL WD +T VT +P +
Sbjct: 1366 AEGKPCDPADRQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQG 1423
Query: 749 -LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+LHP Q RV+++RE AR QGFPD Y+ FG V ++
Sbjct: 1424 RVLHPEQHRVVSVRECARSQGFPDTYRFFGNVLDK 1458
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 260 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 319
P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V E
Sbjct: 1024 PKLRTLDVFSGCGGLSEGF----HQAGIS-ETHWAIEMWDPAAQAFRLNNPGTTVFTEDC 1078
Query: 320 DDFLSLL 326
+ L L+
Sbjct: 1079 NVLLKLV 1085
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 133 YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSK 192
Y+ARI L+E DGE F A WF R DTV+ + + D +FL D +D L+ + K
Sbjct: 658 YLARITALWE--DGEKMFHAHWFCRGTDTVLGESS---DPLELFLVDECEDMQLSFVHGK 712
Query: 193 AKI 195
+
Sbjct: 713 VNV 715
>gi|432869168|ref|XP_004071656.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Oryzias
latipes]
Length = 1466
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 186/397 (46%), Gaps = 60/397 (15%)
Query: 427 LKEFVTKGYRSNIL----PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L + V G ++N L P GDV+ +CGGPPCQG SG NRF + KN ++ +
Sbjct: 1043 LLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSY 1100
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ +Y +PK+ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R
Sbjct: 1101 LRYXDYYRPKFFLLENVRNFVSFKNSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRR 1160
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARG----VIPNEFQEIIVAYANNQPCQLEKGVLLSD 598
R + A P +KLP+YP P H R V+ +E + + N + + + + D
Sbjct: 1161 RAIILAAAPGEKLPRYPEPLHVFAPRACSLSVVVDEKRYVSNVTRGNG--GIYRTITVRD 1218
Query: 599 AISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQ 658
++SDLP + N S E Y ++ FQ+ IR ++ +L DH
Sbjct: 1219 SMSDLPEIRNGASALEISYNGEPQSWFQRQIRGTQYQ-------------PILRDHICKD 1265
Query: 659 VNNDDYERVCCIPKRKGANFRDLPGVLV-----GPDNKVRWDPSMER------------V 701
++ R+ IP G+++RDLP + V K+R+ + ++
Sbjct: 1266 MSALVEGRMRHIPLAPGSDWRDLPNIEVRLKDGTMTKKLRYTHTDKKNGRSSTGALRGVC 1325
Query: 702 MLKSGKP--------------LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR 747
GKP +P + H + +GRL WD +T VT +P +
Sbjct: 1326 TCAGGKPCDPADRQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGK 1383
Query: 748 I--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+LHP Q RV+++RE AR QGFPD Y+ FG + ++
Sbjct: 1384 QGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNILDK 1420
>gi|148225023|ref|NP_001084021.1| DNA (cytosine-5-)-methyltransferase 1 [Xenopus laevis]
gi|1731732|dbj|BAA11458.1| DNA (cytosine-5-)-methyltransferase [Xenopus laevis]
Length = 1490
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 183/397 (46%), Gaps = 60/397 (15%)
Query: 427 LKEFVTKGYRSNIL----PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L + V G ++N L P GDV+ +CGGPPCQG SG NRF + KN ++ +
Sbjct: 1069 LLKLVMSGEKTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSY 1126
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ +Y +PKY L+ENV + + F + + + LV M YQ G++ AG YG+ Q R
Sbjct: 1127 LSYCDYYRPKYFLLENVRNFVSFKKSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRR 1186
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARG----VIPNEFQEIIVAYANNQPCQLEKGVLLSD 598
R + A P +KLP +P P H R V+ +E + + N L + + + D
Sbjct: 1187 RAIVLAAAPGEKLPMFPEPLHVFAPRACTLSVVVDEKKYVSNTTRTNS--SLFRTITVRD 1244
Query: 599 AISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQ 658
+SDLP + N S E Y ++ FQ+ IR ++ + L DH
Sbjct: 1245 TMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQPI-------------LRDHVCKD 1291
Query: 659 VNNDDYERVCCIPKRKGANFRDLPGVLV-----GPDNKVRWDPSMER------------V 701
++ R+ IP G+++RDLP + V K+R+ ++
Sbjct: 1292 MSALVAARMRHIPLAPGSDWRDLPNMEVRLSDGTTSRKLRYTHHDKKNGRSGTGALRGVC 1351
Query: 702 MLKSGKP--------------LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR 747
GK +P + H + +GRL WD +T VT +P +
Sbjct: 1352 CCSEGKQCDPADRQFGTLIPWCLPHTGNRHNHWAGL--YGRLEWDSFFSTTVTNPEPMGK 1409
Query: 748 I--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+LHP Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 1410 QGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDK 1446
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 254 NSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETK 313
NS P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T
Sbjct: 1006 NSGDKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETNWAIEMWEPAAQAFRLNNPGTT 1060
Query: 314 VRNEAADDFLSLL 326
V E + L L+
Sbjct: 1061 VFTEDCNILLKLV 1073
>gi|405116965|gb|AFR91943.1| DNA cytosine-5-methyltransferase 1 [Patiria pectinifera]
Length = 1592
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 184/385 (47%), Gaps = 58/385 (15%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
R LP G+V+ +CGGPPCQG SG NRF + + + KN + ++ +Y +PK+ L
Sbjct: 1169 RGQKLPQRGEVEVLCGGPPCQGFSGMNRFNSREYS--KFKNSLISSYLSYCDYYRPKFFL 1226
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + + + + + A+ LV M YQ G++ AG YG+PQ R R + A P +KL
Sbjct: 1227 LENVRNFVSYKKNMVLKLALRCLVRMGYQCTFGVLQAGHYGVPQTRRRAIILAAAPGQKL 1286
Query: 556 PQYPLPTHEIVARG----VIPNEFQ-EIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNE 610
P YP P H R V+ +E + +++ + P + + + A+SDLP + N
Sbjct: 1287 PFYPEPNHVFAPRACQLSVLVDERKINSNISWLESAP---YRTITVRAAMSDLPEIHNGH 1343
Query: 611 SEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCI 670
+ E Y ++ FQ+ IR ++ +L DH +++ R+ I
Sbjct: 1344 QKLEISYDGEPQSAFQRKIRGNQYQ-------------PILRDHICKEMSQLVATRMRHI 1390
Query: 671 PKRKGANFRDLPGVLVG-PDN----KVRWDPSMERVMLKSGKPL---------------- 709
P G+++RDLP + + PD K+R+ ++ S L
Sbjct: 1391 PLAPGSDWRDLPNIQITLPDGNICRKLRYTHKDKKNGYSSNGSLRGVCSCAEGEKCDTAY 1450
Query: 710 ----------VPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRV 757
+P + H + +GRL WD +T VT +P + +LHP Q RV
Sbjct: 1451 RQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRV 1508
Query: 758 LTIRENARLQGFPDCYQLFGPVKER 782
+++RE AR QGFPD Y+ FG + E+
Sbjct: 1509 VSVRECARSQGFPDTYRFFGTILEK 1533
>gi|49117032|gb|AAH72774.1| Dnmt1 protein [Xenopus laevis]
Length = 1490
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 183/397 (46%), Gaps = 60/397 (15%)
Query: 427 LKEFVTKGYRSNIL----PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L + V G ++N L P GDV+ +CGGPPCQG SG NRF + KN ++ +
Sbjct: 1069 LLKLVMSGEKTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSY 1126
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ +Y +PKY L+ENV + + F + + + LV M YQ G++ AG YG+ Q R
Sbjct: 1127 LSYCDYYRPKYFLLENVRNFVSFKKSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRR 1186
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARG----VIPNEFQEIIVAYANNQPCQLEKGVLLSD 598
R + A P +KLP +P P H R V+ +E + + N L + + + D
Sbjct: 1187 RAIILAAAPGEKLPMFPEPLHVFAPRACTLSVVVDEKKYVSNTTRTNS--SLFRTITVRD 1244
Query: 599 AISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQ 658
+SDLP + N S E Y ++ FQ+ IR ++ + L DH
Sbjct: 1245 TMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQPI-------------LRDHVCKD 1291
Query: 659 VNNDDYERVCCIPKRKGANFRDLPGVLV-----GPDNKVRWDPSMER------------V 701
++ R+ IP G+++RDLP + V K+R+ ++
Sbjct: 1292 MSALVAARMRHIPLAPGSDWRDLPNMEVRLSDGTTSRKLRYTHHDKKNGRSGTGALRGVC 1351
Query: 702 MLKSGKP--------------LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR 747
GK +P + H + +GRL WD +T VT +P +
Sbjct: 1352 CCSEGKQCDPADRQFGTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGK 1409
Query: 748 I--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+LHP Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 1410 QGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDK 1446
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 254 NSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETK 313
NS P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T
Sbjct: 1006 NSGDKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETNWAIEMWEPAAQAFRLNNPGTT 1060
Query: 314 VRNEAADDFLSLL 326
V E + L L+
Sbjct: 1061 VFTEDCNILLKLV 1073
>gi|348509192|ref|XP_003442135.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Oreochromis
niloticus]
Length = 1505
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 184/397 (46%), Gaps = 60/397 (15%)
Query: 427 LKEFVTKGYRSNIL----PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L + V G ++N L P GDV+ +CGGPPCQG SG NRF + KN ++ +
Sbjct: 1082 LLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSY 1139
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ +Y +PK+ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R
Sbjct: 1140 LSYCDYYRPKFFLLENVRNFVSFKNSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRR 1199
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARG----VIPNEFQEIIVAYANNQPCQLEKGVLLSD 598
R + A P +KLP+YP P H R V+ E + + N + + + + D
Sbjct: 1200 RAIILAAAPGEKLPRYPEPLHVFAPRACSLSVVVGEKRYVSNVTRGNG--GIYRTITVRD 1257
Query: 599 AISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQ 658
+SDLP + N + E Y ++ FQ+ IR ++ +L DH
Sbjct: 1258 TMSDLPEIRNGAAALEISYNGEPQSWFQRQIRGTQYQ-------------PILRDHICKD 1304
Query: 659 VNNDDYERVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMER------------V 701
++ R+ IP G+++RDLP + V + K+R+ ++
Sbjct: 1305 MSALVEGRMRYIPLAPGSDWRDLPNIEVRLKDGTLTKKLRYTHHDKKNGRSGTGALRGVC 1364
Query: 702 MLKSGKP--------------LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR 747
GKP +P + H + +GRL WD +T VT +P +
Sbjct: 1365 TCAGGKPCDPSDRQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGK 1422
Query: 748 I--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+LHP Q RV+++RE AR QGFPD Y+ FG + ++
Sbjct: 1423 QGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNILDK 1459
>gi|74136491|ref|NP_001028141.1| DNA (cytosine-5)-methyltransferase 1 [Monodelphis domestica]
gi|22023943|gb|AAM89258.1|AF527541_1 cytosine-5-methyltransferase [Monodelphis domestica]
Length = 1514
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 184/398 (46%), Gaps = 62/398 (15%)
Query: 427 LKEFVTKGYRSNIL----PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L + V G ++N L P GDV+ +CGGPPCQG SG NRF + KN ++ F
Sbjct: 1092 LLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSF 1149
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ +Y +P++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R
Sbjct: 1150 LSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRR 1209
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARG-----VIPNEFQEIIVAYANNQPCQLEKGVLLS 597
R + A P +KLP +P P H R V+ ++ + N+ P + + +
Sbjct: 1210 RAIILAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSNITRMNSAPF---RTITVR 1266
Query: 598 DAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPF 657
D +SDLP + N S E Y ++ FQ+ IR ++ +L DH
Sbjct: 1267 DTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQ-------------PILRDHICK 1313
Query: 658 QVNNDDYERVCCIPKRKGANFRDLPGVLV-----GPDNKVRWDPSMER------------ 700
++ R+ IP G+++RDLP + V K+R+ ++
Sbjct: 1314 DMSALVAGRMRHIPLAPGSDWRDLPNIEVRLSDGTTTRKLRYTHHEKKNGRSNTGALRGV 1373
Query: 701 VMLKSGKP--------------LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHN 746
GKP +P + H + +GRL WD +T VT +P
Sbjct: 1374 CSCAEGKPCDPADRQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMG 1431
Query: 747 RI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+ +LHP Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 1432 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDK 1469
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 260 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 319
P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V E
Sbjct: 1035 PKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFTEDC 1089
Query: 320 DDFLSLL 326
+ L L+
Sbjct: 1090 NVLLKLV 1096
>gi|395512631|ref|XP_003760539.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Sarcophilus
harrisii]
Length = 1486
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 184/398 (46%), Gaps = 62/398 (15%)
Query: 427 LKEFVTKGYRSNIL----PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L + V G ++N L P GDV+ +CGGPPCQG SG NRF + KN ++ F
Sbjct: 1064 LLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSF 1121
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ +Y +P++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R
Sbjct: 1122 LSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRR 1181
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARG-----VIPNEFQEIIVAYANNQPCQLEKGVLLS 597
R + A P +KLP +P P H R V+ ++ + N+ P + + +
Sbjct: 1182 RAIILAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKKFVSNITRMNSAPF---RTITVR 1238
Query: 598 DAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPF 657
D +SDLP + N S E Y ++ FQ+ IR ++ +L DH
Sbjct: 1239 DTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQ-------------PILRDHICK 1285
Query: 658 QVNNDDYERVCCIPKRKGANFRDLPGVLV-----GPDNKVRWDPSMER------------ 700
++ R+ IP G+++RDLP + V K+R+ ++
Sbjct: 1286 DMSALVAGRMRHIPLAPGSDWRDLPNIEVRLSDGTTTRKLRYTHHEKKNGRSNTGALRGV 1345
Query: 701 VMLKSGKP--------------LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHN 746
GKP +P + H + +GRL WD +T VT +P
Sbjct: 1346 CSCAEGKPCDPADRQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMG 1403
Query: 747 RI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+ +LHP Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 1404 KQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDK 1441
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 260 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 319
P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V E
Sbjct: 1007 PKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFTEDC 1061
Query: 320 DDFLSLL 326
+ L L+
Sbjct: 1062 NVLLKLV 1068
>gi|291238124|ref|XP_002738981.1| PREDICTED: DNA (cytosine-5-)-methyltransferase [Saccoglossus
kowalevskii]
Length = 1294
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 182/380 (47%), Gaps = 56/380 (14%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP G V+ +CGGPPCQG SG NRF + + + KN ++ ++ +Y +PK+ L+ENV
Sbjct: 896 LPQKGQVELLCGGPPCQGFSGMNRFNSREYS--KFKNSLVVSYLSYCDYYRPKFFLLENV 953
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + + L+SM YQ G++ AG YG+ Q R R + A P +KLP YP
Sbjct: 954 RNFVSFKKSMVLKLTMRSLLSMGYQCTFGVVQAGLYGVAQTRRRAIILAAAPGEKLPFYP 1013
Query: 560 LPTHEIVARG-----VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
P H R I + E +A + P + + + DA+SDLP + N ++ E
Sbjct: 1014 EPAHVFSPRACPLSVTIDEKKYESNMARVWSAP---YRTITVRDALSDLPEIRNGYNKLE 1070
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
Y A+ +QK IR +H + L DH +++ R+ IP
Sbjct: 1071 MSYDREAQNGYQKAIRGSQHQPI-------------LRDHICKEMSALVEGRMRHIPLAP 1117
Query: 675 GANFRDLPGVLV--------------GPDNKVRWDPSMER------VMLKSGKP------ 708
G+++RDLP + V PD K P+ + M K P
Sbjct: 1118 GSDWRDLPNIAVRLSDGNTCKKLRYLHPDKKNGKGPNGQLRGVCACAMNKPCDPTDRQFN 1177
Query: 709 -LVPDYAMKF---EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRE 762
L+P + + H + +GR+ WD +T VT +P + +LHP Q RV+++RE
Sbjct: 1178 TLIP-WCLPHTGNRHNNWAGLYGRVEWDGYFSTTVTNPEPMGKQGRVLHPEQHRVVSVRE 1236
Query: 763 NARLQGFPDCYQLFGPVKER 782
AR QGFPD Y+ +G + ++
Sbjct: 1237 CARSQGFPDTYRFYGTILDK 1256
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 28/158 (17%)
Query: 39 EQREDEEVKEEPVELVTRVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALNEEEE 98
E+ +DE K+ ++ T +KK +K K + ++ P++ + K Y R +N+EE
Sbjct: 385 ERNDDENQKKPTKKITTPIKKGNRKTK----MKWIGKPIAEENKKKYY--RSVRINDEE- 437
Query: 99 VLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYR 157
++GD V ++ +A + ++E + + F A+W+ R
Sbjct: 438 -----------------ISIGDAVSVSPQDPTKPVLLAFVTYMWEDGNKDQMFHAKWYCR 480
Query: 158 AEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
DTV+ ++A D VF D +D L ++ K+KI
Sbjct: 481 GVDTVLGEMA---DPLEVFAVDECEDTALEYVMGKSKI 515
>gi|328708218|ref|XP_003243626.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Acyrthosiphon
pisum]
Length = 1227
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 188/405 (46%), Gaps = 66/405 (16%)
Query: 423 CKEKLKEFVTKGYRSNI----LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQ 478
C LK G +SN +P G+VDFICGGPPCQG SG NRF + Q +L KN
Sbjct: 814 CNHLLK-LAMAGEKSNSKNQNIPQKGEVDFICGGPPCQGFSGMNRFNSGQYSL--FKNSL 870
Query: 479 LLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLP 538
++ F+ I++ +PKY +MENV + + F + + + + M YQ GI+ AG++G+P
Sbjct: 871 IVSFLSYIDFYRPKYFVMENVRNFVSFKRSMVLKLTLRCITRMGYQCTFGILQAGNFGVP 930
Query: 539 QFRLRVFLWGARPFKKLPQYPLPTHEIVARGV-----IPNEFQEIIVAYANNQPCQLEKG 593
Q R R+ + A P +KLP YP P + + + +E + Y N+ P +
Sbjct: 931 QTRRRLIIMAAAPGEKLPFYPEPINVFNRKSSSLSVQVGDEKFKTNCKYVNSAPL---RT 987
Query: 594 VLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYD 653
+ + DA SDLP ++N ++ Y + T QK +R + + S L D
Sbjct: 988 LTVYDAWSDLPGISNGAYQERIPYNSTPITHLQKLLRYPDNQYAD----------STLCD 1037
Query: 654 HRPFQVNNDDYERVCCIPKRKGANFRDLPGVLV----------------------GPDNK 691
H ++++ R+ IP +G+++RDLP + V GP+
Sbjct: 1038 HICKEMSSLVQARMALIPVCEGSDWRDLPNITVQLPEGLKTNTLLYTHHDIKNGYGPNGA 1097
Query: 692 VR----------WDPS--MERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVV 739
+R DP ++ P + H + +GRL W +T +
Sbjct: 1098 LRGVCTCASGDKCDPQDRQNNTIIPWCLPHTGN-----RHNNWAGLYGRLAWSGFCSTTI 1152
Query: 740 TRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
T +P + +LHP Q RV+++RE AR QGF D + G + ++
Sbjct: 1153 TNPEPMGKQGRVLHPEQHRVVSVRECARSQGFKDSFIFCGSIFDK 1197
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 265 LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLS 324
LD+++GCG +S GL SG+ +++ WAI+ + A + K N+PE V E + L
Sbjct: 765 LDIFAGCGGLSRGL----EDSGL-VISNWAIECDDKAAGAFKLNNPEATVFVEDCNHLLK 819
Query: 325 L 325
L
Sbjct: 820 L 820
>gi|198416008|ref|XP_002122948.1| PREDICTED: Zn-finger (CXXC)-5 [Ciona intestinalis]
Length = 1305
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/378 (30%), Positives = 179/378 (47%), Gaps = 52/378 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + + + KN ++ ++ +Y +P++ L+ENV
Sbjct: 915 LPQKGDVELLCGGPPCQGFSGMNRFNSREYS--RFKNSLVVSYLSYCDYYRPRFFLLENV 972
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + ++ L+ M YQ G++ AG YG+ Q R R + A P ++LP YP
Sbjct: 973 RNFVSFKNCMVLKLSLAALLRMGYQCTFGVLQAGHYGVSQTRRRAIILAAAPGEQLPLYP 1032
Query: 560 LPTHEIVARGVIPNEFQEIIVAYANNQPCQLE---KGVLLSDAISDLPLVTNNESEDERK 616
P H RG + Q Y NN + + + DA+SDLP + N ++ E
Sbjct: 1033 EPLHTFSTRGGSLSA-QVGDTRYTNNIKWSTSAPYRTITVHDAMSDLPKIPNGHAKLEMP 1091
Query: 617 YGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGA 676
Y T FQ+ +R + + Q R + D P R+ IP G+
Sbjct: 1092 YTGEPLTHFQRMMRGKDY--------QGVVRDHICKDMSPLVA-----ARMALIPLIPGS 1138
Query: 677 NFRDLPG----VLVGPDNKV-RWD-----------PSMERV-----------MLKSGKPL 709
++RDLP + G KV R++ M V M + L
Sbjct: 1139 DWRDLPNKPHKLSDGTTAKVLRYEYHDKKQGRSSTGGMRGVCSCAEGRACDAMDRQFNTL 1198
Query: 710 VPDYAMKF---EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENA 764
+P + + H + +GRL WD +T VT +P + +LHP Q RV+++RE A
Sbjct: 1199 IP-WCLPHTGNRHNNWAGLYGRLCWDGFFSTTVTNPEPMGKQGRVLHPQQHRVVSVRECA 1257
Query: 765 RLQGFPDCYQLFGPVKER 782
R QGFPD Y+ FG + ++
Sbjct: 1258 RSQGFPDSYRFFGSILDK 1275
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 15/140 (10%)
Query: 69 DLFFVSPPVSADEALKRYPDRYKALNEEEEVLQ----------ARCHYTQASVDGCLYNL 118
DL S P DE +K P + K + + + +Y V G +
Sbjct: 407 DLMEDSDPDDKDEKVKPSPSKMKVIKAGKVTTSWVGEALYEEGGKVYYPGVRVGGDVIEG 466
Query: 119 GDDAYVK-AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFL 177
G+ VK +EG + YI R+V ++ G+ WF RA DT++++ + + +
Sbjct: 467 GECVSVKNKDEGGLPYIGRVVYMWGESGGK-MVHVDWFMRAADTILQETS---QPDELLI 522
Query: 178 SDVEDDNPLNCIVSKAKIAE 197
D DD + CI K ++
Sbjct: 523 IDECDDLSVECIAGKVDVSH 542
>gi|190338613|gb|AAI63894.1| Dnmt1 protein [Danio rerio]
Length = 1500
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 183/397 (46%), Gaps = 60/397 (15%)
Query: 427 LKEFVTKGYRSNIL----PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L + V G ++N L P GDV+ +CGGPPCQG SG NRF + KN ++ +
Sbjct: 1078 LLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSY 1135
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ +Y +PK+ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R
Sbjct: 1136 LSYCDYYRPKFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRR 1195
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARG----VIPNEFQEIIVAYANNQPCQLEKGVLLSD 598
R + A P +KLP+YP P H R V +E + + N + + + + D
Sbjct: 1196 RAIILAAAPGEKLPRYPEPLHVFAPRACSLSVAVDEKKYVSNVTRGNG--GIYRTITVRD 1253
Query: 599 AISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQ 658
+SDLP + N + E Y ++ FQ+ IR ++ +L DH
Sbjct: 1254 TMSDLPEIRNGAAALEISYNGEPQSWFQRQIRGSQYQ-------------PILRDHICKD 1300
Query: 659 VNNDDYERVCCIPKRKGANFRDLPGVLV-----GPDNKVRWDPSMER------------V 701
++ R+ IP G+++RDLP + V K+R+ S ++
Sbjct: 1301 MSALVAARMRHIPLAPGSDWRDLPNIEVRLRDGTTTKKLRYTHSDKKNGRSGTGALRGVC 1360
Query: 702 MLKSGKP--------------LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR 747
GK +P + H + +GRL WD +T VT +P +
Sbjct: 1361 SCSEGKQCDPADRQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGK 1418
Query: 748 I--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+LHP Q RV+++RE AR QGFPD Y+ FG V ++
Sbjct: 1419 QGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNVLDK 1455
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 260 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 319
P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V E
Sbjct: 1021 PKLRTLDVFSGCGGLSEGF----HQAGIS-ETHWAIEMWDPAAQAFRLNNPGTTVFTEDC 1075
Query: 320 DDFLSLL 326
+ L L+
Sbjct: 1076 NVLLKLV 1082
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 105 HYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVI 163
+Y + V+ + +GD V ++ + Y+ARI L++ DGE F A WF R DTV+
Sbjct: 626 YYMKVRVENEVLEVGDCVSVSPDDPSHPLYLARITALWD--DGEKMFHAHWFCRGTDTVL 683
Query: 164 KDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
+ + D +FL D +D L+ I K +
Sbjct: 684 GESS---DPLELFLVDECEDMQLSFIHGKVNV 712
>gi|156739999|gb|ABU93584.1| DNA cytosine 5-methyltransferase 1 [Ovis aries]
Length = 1572
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 176/382 (46%), Gaps = 58/382 (15%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P+Y L
Sbjct: 1174 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1231
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P + L
Sbjct: 1232 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEPL 1291
Query: 556 PQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNN 609
P +P P H R V +F I ++ + + + D +SDLP + N
Sbjct: 1292 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIRNG 1347
Query: 610 ESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCC 669
S E Y ++ FQ+ +R ++ + L DH ++ R+
Sbjct: 1348 ASALEISYNGEPQSWFQRQLRGSQYQPI-------------LRDHICKDMSALVAARMRH 1394
Query: 670 IPKRKGANFRDLPGVLVGPDN-----KVRWDPSMERVMLKS------------GKPLVPD 712
IP G+++RDLP + V + K+R++ ++ S GKP P
Sbjct: 1395 IPLAPGSDWRDLPNIEVRLSDGTLARKLRYNYHDKKNGCSSAGALRGVCSCVEGKPCEP- 1453
Query: 713 YAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRV 757
A +F H +GRL WD +T VT +P + +LHP Q RV
Sbjct: 1454 AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRV 1513
Query: 758 LTIRENARLQGFPDCYQLFGPV 779
+++RE AR QGFPD Y+LFG +
Sbjct: 1514 VSVRECARSQGFPDTYRLFGNI 1535
Score = 39.3 bits (90), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 711 KSYYKKVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 770
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK ++
Sbjct: 771 V---LGATSDPLELFLVDECEDMQLSYIHSKVQV 801
>gi|40538748|ref|NP_571264.1| DNA (cytosine-5)-methyltransferase 1 [Danio rerio]
gi|19263095|gb|AAL86596.1|AF483203_1 DNA (cytosine-5)-methyltransferase [Danio rerio]
Length = 1499
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 183/397 (46%), Gaps = 60/397 (15%)
Query: 427 LKEFVTKGYRSNIL----PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L + V G ++N L P GDV+ +CGGPPCQG SG NRF + KN ++ +
Sbjct: 1077 LLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSY 1134
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ +Y +PK+ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R
Sbjct: 1135 LSYCDYYRPKFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRR 1194
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARG----VIPNEFQEIIVAYANNQPCQLEKGVLLSD 598
R + A P +KLP+YP P H R V +E + + N + + + + D
Sbjct: 1195 RAIILAAAPGEKLPRYPEPLHVFAPRACSLSVAVDEKKYVSNVTRGNG--GIYRTITVRD 1252
Query: 599 AISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQ 658
+SDLP + N + E Y ++ FQ+ IR ++ +L DH
Sbjct: 1253 TMSDLPEIRNGAAALEISYNGEPQSWFQRQIRGSQYQ-------------PILRDHICKD 1299
Query: 659 VNNDDYERVCCIPKRKGANFRDLPGVLV-----GPDNKVRWDPSMER------------V 701
++ R+ IP G+++RDLP + V K+R+ S ++
Sbjct: 1300 MSALVAARMRHIPLAPGSDWRDLPNIEVRLRDGTTTKKLRYTHSDKKNGRSGTGALRGVC 1359
Query: 702 MLKSGKP--------------LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR 747
GK +P + H + +GRL WD +T VT +P +
Sbjct: 1360 SCSEGKQCDPADRQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGK 1417
Query: 748 I--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+LHP Q RV+++RE AR QGFPD Y+ FG V ++
Sbjct: 1418 QGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNVLDK 1454
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 248 SSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKF 307
++ +G+ P+ P++ LD++SGCG +S G +G+ T WAI++ A ++ +
Sbjct: 1009 TTGSGAQEPV-VPKLRTLDVFSGCGGLSEGF----HQAGIS-ETHWAIEMWDPAAQAFRL 1062
Query: 308 NHPETKVRNEAADDFLSLL 326
N+P T V E + L L+
Sbjct: 1063 NNPGTTVFTEDCNVLLKLV 1081
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 105 HYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVI 163
+Y + V+ + +GD V ++ + Y+ARI L++ DGE F A WF R DTV+
Sbjct: 626 YYMKVRVENEVLEVGDCVSVSPDDPSHPLYLARITALWD--DGEKMFHAHWFCRGTDTVL 683
Query: 164 KDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
+ + D +FL D +D L+ I K +
Sbjct: 684 GESS---DPLELFLVDECEDMQLSFIHGKVNV 712
>gi|410902659|ref|XP_003964811.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Takifugu rubripes]
Length = 1493
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 180/395 (45%), Gaps = 56/395 (14%)
Query: 427 LKEFVTKGYRSNIL----PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L + V G ++N L P GDV+ +CGGPPCQG SG NRF + KN ++ +
Sbjct: 1070 LLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSAFKNSLVVSY 1127
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ +Y +PK+ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R
Sbjct: 1128 LSYCDYYRPKFFLLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRR 1187
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARGVIPNEF--QEIIVAYANNQPCQLEKGVLLSDAI 600
R + A P ++LP+YP P H R N + V+ + + + + D +
Sbjct: 1188 RAIILAAAPGEELPRYPEPLHVFAPRACSLNVVVDDKKFVSNVTRGNGGIYRTITVRDTM 1247
Query: 601 SDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVN 660
SDLP + N S E Y ++ FQ+ IR ++ +L DH ++
Sbjct: 1248 SDLPEIRNGASALEISYNGEPQSWFQRQIRGTQYQ-------------PILRDHICKDMS 1294
Query: 661 NDDYERVCCIPKRKGANFRDLPGVLV-----GPDNKVRW---DPSMER---------VML 703
R+ IP G+++RDLP + V K+R+ D R
Sbjct: 1295 ALVEGRMRHIPLAPGSDWRDLPNIEVRLRDGTMTKKLRYTHLDKKNGRSSTGALRGVCTC 1354
Query: 704 KSGKP--------------LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI- 748
G P +P + H + +GRL WD +T VT +P +
Sbjct: 1355 AGGTPCDPADRQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQG 1412
Query: 749 -LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+LHP Q RV+++RE AR QGFPD Y+ FG + ++
Sbjct: 1413 RVLHPEQHRVVSVRECARSQGFPDTYRFFGNILDK 1447
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 29/184 (15%)
Query: 13 AAEESNHSKARRRKLNLAEQQHQQQEEQREDEEVKEEPVELVTRVKKKTQKNKPDSDLFF 72
+ +S + +RR NLA ++ + E E + PVE +V +K + + +L +
Sbjct: 549 GSGKSKQACKQRRCPNLAVKEAEDDENV----EEDDAPVEKTKKVSHAKRKKQTECNLTW 604
Query: 73 VSPPVSADEALKRYPDRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD 132
+ PV L E + R +Y Q S++ + +GD V +E+ +V
Sbjct: 605 IGEPV---------------LTEGK-----RNYYKQVSINDEVLEVGDCVSVSSEDPSVP 644
Query: 133 YI-ARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVS 191
I ARI L+E G+ F A WF R TV+ + + D + L D +D LN +
Sbjct: 645 LILARITSLWEDTHGK-MFHAHWFMRGIHTVLGECS---DPLELVLVDDCEDMQLNYVQG 700
Query: 192 KAKI 195
K I
Sbjct: 701 KVNI 704
>gi|190337769|gb|AAI63893.1| Dnmt1 protein [Danio rerio]
Length = 1500
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 183/397 (46%), Gaps = 60/397 (15%)
Query: 427 LKEFVTKGYRSNIL----PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L + V G ++N L P GDV+ +CGGPPCQG SG NRF + KN ++ +
Sbjct: 1078 LLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSY 1135
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ +Y +PK+ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R
Sbjct: 1136 LSYCDYYRPKFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRR 1195
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARG----VIPNEFQEIIVAYANNQPCQLEKGVLLSD 598
R + A P +KLP+YP P H R V +E + + N + + + + D
Sbjct: 1196 RAIILAAAPGEKLPRYPEPLHVFAPRACSLSVAVDEKKYVSNVTRGNG--GIYRTITVRD 1253
Query: 599 AISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQ 658
+SDLP + N + E Y ++ FQ+ IR ++ +L DH
Sbjct: 1254 TMSDLPEIRNGAAALEISYNGEPQSWFQRQIRGSQYQ-------------PILRDHICKD 1300
Query: 659 VNNDDYERVCCIPKRKGANFRDLPGVLV-----GPDNKVRWDPSMER------------V 701
++ R+ IP G+++RDLP + V K+R+ S ++
Sbjct: 1301 MSALVAARMRHIPLAPGSDWRDLPNIEVRLRDGTTTKKLRYTHSDKKNGRSGTGALRGVC 1360
Query: 702 MLKSGKP--------------LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR 747
GK +P + H + +GRL WD +T VT +P +
Sbjct: 1361 SCSEGKQCDPADRQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGK 1418
Query: 748 I--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+LHP Q RV+++RE AR QGFPD Y+ FG V ++
Sbjct: 1419 QGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNVLDK 1455
Score = 42.4 bits (98), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 260 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 319
P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V E
Sbjct: 1021 PKLRTLDVFSGCGGLSEGF----HQAGIS-ETHWAIEMWDPAAQAFRLNNPGTTVFTEDC 1075
Query: 320 DDFLSLL 326
+ L L+
Sbjct: 1076 NVLLKLV 1082
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 105 HYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVI 163
+Y + V+ + +GD V ++ + Y+ARI L++ DGE F A WF R DTV+
Sbjct: 626 YYMKVRVENEVLEVGDCVSVSPDDPSHPLYLARITALWD--DGEKMFHAHWFCRGTDTVL 683
Query: 164 KDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
+ + D +FL D +D L+ I K +
Sbjct: 684 GESS---DPLELFLVDECEDMQLSFIHGKVNV 712
>gi|317108162|ref|NP_872592.2| DNA (cytosine-5)-methyltransferase 1 [Bos taurus]
gi|108935977|sp|Q24K09.1|DNMT1_BOVIN RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1
gi|89994055|gb|AAI14064.1| DNA (cytosine-5-)-methyltransferase 1 [Bos taurus]
gi|296485884|tpg|DAA27999.1| TPA: DNA (cytosine-5)-methyltransferase 1 [Bos taurus]
Length = 1611
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 176/382 (46%), Gaps = 58/382 (15%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P+Y L
Sbjct: 1204 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1261
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P + L
Sbjct: 1262 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEPL 1321
Query: 556 PQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNN 609
P +P P H R V +F I ++ + + + D +SDLP + N
Sbjct: 1322 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIRNG 1377
Query: 610 ESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCC 669
S E Y ++ FQ+ +R ++ + L DH ++ R+
Sbjct: 1378 ASALEISYNGEPQSWFQRQLRGSQYQPI-------------LRDHICKDMSALVAARMRH 1424
Query: 670 IPKRKGANFRDLPGVLVGPDN-----KVRWDPSMERVMLKS------------GKPLVPD 712
IP G+++RDLP + V + K+R++ ++ S GKP P
Sbjct: 1425 IPLAPGSDWRDLPNIEVRLSDGTLARKLRYNYHDKKNGCSSSGALRGVCSCVEGKPCEP- 1483
Query: 713 YAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRV 757
A +F H +GRL WD +T VT +P + +LHP Q RV
Sbjct: 1484 AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRV 1543
Query: 758 LTIRENARLQGFPDCYQLFGPV 779
+++RE AR QGFPD Y+LFG +
Sbjct: 1544 VSVRECARSQGFPDTYRLFGNI 1565
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 741 KSYYKKVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 800
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK ++
Sbjct: 801 V---LGATSDPLELFLVDECEDMQLSYIHSKVQV 831
>gi|417414438|gb|JAA53513.1| Putative translation initiation factor 5b eif-5b, partial [Desmodus
rotundus]
Length = 1581
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 176/386 (45%), Gaps = 60/386 (15%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P+Y L
Sbjct: 1204 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1261
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P +KL
Sbjct: 1262 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKL 1321
Query: 556 PQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNN 609
P +P P H R V +F I ++ + + + D +SDLP + N
Sbjct: 1322 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIRNG 1377
Query: 610 ESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCC 669
S E Y ++ FQ+ +R ++ + L DH ++ R+
Sbjct: 1378 ASAQEISYNGEPQSWFQRQLRGSQYQPI-------------LRDHICKDMSALVAARMRH 1424
Query: 670 IPKRKGANFRDLPGVLVGPDN-----KVRWDPSMERVMLKSGKPL--------------- 709
IP G+++RDLP + V + K+R+ ++ S L
Sbjct: 1425 IPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDKKNGCSSTGALRGVCSCAEGKACDST 1484
Query: 710 -----------VPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDR 756
+P + H + +GRL WD +T VT +P + +LHP Q R
Sbjct: 1485 ARQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHR 1542
Query: 757 VLTIRENARLQGFPDCYQLFGPVKER 782
V+++RE AR QGFPD Y+LFG + ++
Sbjct: 1543 VVSVRECARSQGFPDTYRLFGNILDK 1568
>gi|224613538|gb|ACN60348.1| DNA [Salmo salar]
Length = 466
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 181/395 (45%), Gaps = 56/395 (14%)
Query: 427 LKEFVTKGYRSNIL----PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L + V G ++N L P GDV+ +CGGPPCQG SG NRF + KN ++ +
Sbjct: 33 LLKLVMSGEKTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSY 90
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ +Y +PK+ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R
Sbjct: 91 LSYCDYYRPKFFLLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRR 150
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYAN--NQPCQLEKGVLLSDAI 600
R + A P +KLP+YP P H R N + ++N + + + + D +
Sbjct: 151 RAIILAAAPGEKLPRYPEPLHVFAPRACSLNVVVDDKKYFSNVTRGNGGVYRTITVRDTM 210
Query: 601 SDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVN 660
SDLP + N S E Y ++ FQ+ IR ++ +L DH ++
Sbjct: 211 SDLPEIRNGASALEISYNGEPQSWFQRQIRGTQYQ-------------PILKDHICKDLS 257
Query: 661 NDDYERVCCIPKRKGANFRDLPGVLV--------------GPDNKVRWDPS--MERVMLK 704
R+ IP G+++RDLP + V PD K S + V
Sbjct: 258 ALVAARMRHIPLAPGSDWRDLPNIEVRLRDGTSSKKLRYTHPDKKNGRSSSGALRGVCTC 317
Query: 705 SGKP---------------LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI- 748
SG +P + H + +GRL WD +T VT +P +
Sbjct: 318 SGGVPCDPADRQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQG 375
Query: 749 -LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+LHP Q RV+++RE AR QGFPD Y+ FG V ++
Sbjct: 376 RVLHPEQHRVVSVRECARSQGFPDTYRFFGNVLDK 410
>gi|57164173|ref|NP_001009473.1| DNA (cytosine-5)-methyltransferase 1 [Ovis aries]
gi|29536011|gb|AAO39704.1| DNA (cytosine-5)-methyltransferase 1 [Ovis aries]
Length = 1611
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 176/382 (46%), Gaps = 58/382 (15%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P+Y L
Sbjct: 1204 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1261
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P + L
Sbjct: 1262 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEPL 1321
Query: 556 PQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNN 609
P +P P H R V +F I ++ + + + D +SDLP + N
Sbjct: 1322 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIRNG 1377
Query: 610 ESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCC 669
S E Y ++ FQ+ +R ++ + L DH ++ R+
Sbjct: 1378 ASALEISYNGEPQSWFQRQLRGSQYQPI-------------LRDHICKDMSALVAARMRH 1424
Query: 670 IPKRKGANFRDLPGVLVGPDN-----KVRWDPSMERVMLKS------------GKPLVPD 712
IP G+++RDLP + V + K+R++ ++ S GKP P
Sbjct: 1425 IPLAPGSDWRDLPNIEVRLSDGTLARKLRYNYHDKKNGCSSAGALRGVCSCVEGKPCEP- 1483
Query: 713 YAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRV 757
A +F H +GRL WD +T VT +P + +LHP Q RV
Sbjct: 1484 AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRV 1543
Query: 758 LTIRENARLQGFPDCYQLFGPV 779
+++RE AR QGFPD Y+LFG +
Sbjct: 1544 VSVRECARSQGFPDTYRLFGNI 1565
Score = 39.3 bits (90), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 741 KSYYKKVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 800
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK ++
Sbjct: 801 V---LGATSDPLELFLVDECEDMQLSYIHSKVQV 831
>gi|159474758|ref|XP_001695492.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
gi|158275975|gb|EDP01750.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1663
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 195/414 (47%), Gaps = 83/414 (20%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP PG VD + GGPPCQG SG NR + ++ +K + ++ ++L+P+Y L+ENV
Sbjct: 1198 LPGPGAVDLLVGGPPCQGFSGMNRDNGSEGSV--LKKSMIKAYLSYADFLRPRYFLLENV 1255
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ GG R A+ L+ M YQ R+G++ A +G+PQ R R F+W A P ++LP +P
Sbjct: 1256 RNFAAHEGGRYFRLALRSLLDMGYQVRVGVLNAAHHGVPQSRSRTFIWAALPGERLPHWP 1315
Query: 560 LPT----HEIVARGV-IPN---EFQEIIVAYA-NNQPCQLE------------------- 591
P H +++ V +P E + + A +N ++
Sbjct: 1316 QPLHAFDHTMLSLPVPVPAWVLEHPDCVAALQRDNANVTVQDRGGRGDGGGEGVATLRYW 1375
Query: 592 -----------KGVLLSDAISDLPLVTNNESEDERK---YGTVARTEFQKYIRLRRHDVV 637
+ V + DA+SDL V N + D R+ YG+ +T FQ+ IR V
Sbjct: 1376 AASPAAGGAPLRPVTVWDAVSDLAPVDNADGNDWRRVAPYGSAPQTPFQRAIRGAGVGV- 1434
Query: 638 NLSSA-----------------------QMASRPSLLYDHRPFQVNNDDYERVCCIPK-R 673
++ +A + A+ +L+ DH P ++ ++Y R IPK
Sbjct: 1435 DVEAALGEGAGGSDGGGGVAGAVSVALDESAASAALVSDHVPKRMQRENYTR--HIPKDT 1492
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGK--PLVPD-YAMKFEHQSSTKPFGRLW 730
GA++ L V+ DPS+E + + GK PLVP+ + H +GRL
Sbjct: 1493 PGADWHSLYDVVAA-------DPSLELIHMPGGKTKPLVPNLWKSADRHNGWKGLYGRLP 1545
Query: 731 WDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
TV+T P ++ + HP QDR++T+RE AR QGFPD Y G VK R
Sbjct: 1546 RWGCFPTVITEPSPSGKVGQVFHPLQDRIMTVREYARAQGFPDSYVFSGKVKAR 1599
>gi|283549178|ref|NP_001164522.1| DNA methyltransferase 1a [Apis mellifera]
Length = 1366
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 182/381 (47%), Gaps = 58/381 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP G V+ +CGGPPCQG SG NRF + Q +L KN ++ ++ +Y +P + +MENV
Sbjct: 967 LPQKGQVELLCGGPPCQGFSGMNRFNSRQYSL--FKNSLVVSYLSYCDYYRPNFFIMENV 1024
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + + L+ M YQ GI+ AG+YG+PQ R R+ + A P + LP+YP
Sbjct: 1025 RNFVSFKRSMVLKLTLRCLIRMGYQCTFGILQAGNYGIPQTRRRMIILAAAPGQMLPKYP 1084
Query: 560 LPTHEIVARG-----VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
P+H R ++ N+ + ++ P + + + DA+ DLP + N +++E
Sbjct: 1085 EPSHVFSKRACQLSVLVDNKKYSSNCNWIDSAPF---RTISVKDAMFDLPEIKNGWNKEE 1141
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
Y T FQ+ +R +++ LL DH ++ R+ IP
Sbjct: 1142 MSYTNEPTTHFQRKMRGKQYQ-------------PLLRDHICKEMTPLVEARMAHIPIAS 1188
Query: 675 GANFRDLPGVLV-------------GPDNKVRWDPSMER-------VMLKSGKP------ 708
G+++RDLP + V D+K S+ KS P
Sbjct: 1189 GSDWRDLPNIAVRLSDGTYCKQLEYTHDDKKAGRSSVGAYRGVCCCCTGKSCDPTDRQFN 1248
Query: 709 -----LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIR 761
+P + H + +GRL W+ +T +T +P + +LHP Q RV+++R
Sbjct: 1249 TLIPWCLPHTGNRHNHWAGL--YGRLEWNGYFSTTITNPEPMGKQGRVLHPVQTRVVSVR 1306
Query: 762 ENARLQGFPDCYQLFGPVKER 782
E AR QGFPD ++ +G + ++
Sbjct: 1307 ECARSQGFPDSFRFYGTILDK 1327
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 133 YIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSK 192
++A+++ ++E+ +G F A W +R DT++ + + D +FLSD DD P + SK
Sbjct: 520 HVAKVIYMWENKNGIKQFHANWLHRGNDTILGETS---DPIELFLSDDCDDIPFKSVRSK 576
Query: 193 AKI 195
+
Sbjct: 577 CTV 579
>gi|440891547|gb|ELR45163.1| DNA (cytosine-5)-methyltransferase 1 [Bos grunniens mutus]
Length = 1618
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 182/398 (45%), Gaps = 61/398 (15%)
Query: 427 LKEFVTKG----YRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L++ V G R LP GDV+ +CGGPPCQG SG NRF + KN ++ F
Sbjct: 1191 LRKLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSF 1248
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ +Y +P+Y L+ENV + + F + + + LV M YQ G++ AG YG+ Q R
Sbjct: 1249 LSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRR 1308
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQP-----CQLEKG---- 593
R + A P + LP +P P H + R + +++ +L G
Sbjct: 1309 RAIILAAAPGEPLPLFPEPVHVVAPRXXXXXXXXCPLRVVVDDKKFVSNITRLSSGPFRT 1368
Query: 594 VLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYD 653
+ + D +SDLP + N S E Y ++ FQ+ +R ++ + L D
Sbjct: 1369 ITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQLRGSQYQPI-------------LRD 1415
Query: 654 HRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMERVMLKS--- 705
H ++ R+ IP G+++RDLP + V + K+R++ ++ S
Sbjct: 1416 HICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTLARKLRYNYHDKKNGCSSSGA 1475
Query: 706 ---------GKPLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQ 743
GKP P A +F H +GRL WD +T VT +
Sbjct: 1476 LRGVCSCVEGKPCGP-AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPE 1534
Query: 744 PHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
P + +LHP Q RV+++RE AR QGFPD Y+LFG +
Sbjct: 1535 PMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNI 1572
Score = 39.3 bits (90), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 741 KSYYKKVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 800
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK ++
Sbjct: 801 V---LGATSDPLELFLVDECEDMQLSYIHSKVQV 831
>gi|344282773|ref|XP_003413147.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 2 [Loxodonta
africana]
Length = 1625
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 178/383 (46%), Gaps = 59/383 (15%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L
Sbjct: 1216 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1273
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P +KL
Sbjct: 1274 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKL 1333
Query: 556 PQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNN 609
P +P P H R V +F I ++ + + + D +SDLP V N
Sbjct: 1334 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEVRNG 1389
Query: 610 ESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCC 669
S E Y ++ FQ+ +R ++ + L DH ++ R+
Sbjct: 1390 ASALEISYNGEPQSWFQRQLRGTQYQPI-------------LRDHICKDMSALVAARMRH 1436
Query: 670 IPKRKGANFRDLPGVLVGPDN-----KVRWDP-------SMERVM------LKSGKPLVP 711
IP G+++RDLP + V + K+R+ S R + +++GK P
Sbjct: 1437 IPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGYSSNRALRGVCSCVEAGKACDP 1496
Query: 712 DYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDR 756
A +F H +GRL WD +T VT +P + +LHP Q R
Sbjct: 1497 -AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHR 1555
Query: 757 VLTIRENARLQGFPDCYQLFGPV 779
V+++RE AR QGFPD Y+LFG +
Sbjct: 1556 VVSVRECARSQGFPDTYRLFGNI 1578
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 753 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 812
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK K+
Sbjct: 813 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 843
>gi|37728049|gb|AAO44952.1| cytosine-5-methyltransferase [Bos taurus]
Length = 1611
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 176/389 (45%), Gaps = 72/389 (18%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P+Y L
Sbjct: 1204 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1261
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P + L
Sbjct: 1262 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEPL 1321
Query: 556 PQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNN 609
P +P P H R V +F I ++ + + + D +SDLP + N
Sbjct: 1322 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIRNG 1377
Query: 610 ESEDERKYGTVARTEFQKYIR-------LRRHDVVNLSSAQMASRPSLLYDHRPFQVNND 662
S E Y ++ FQ+ +R LR H ++S+ A
Sbjct: 1378 ASALEISYNGEPQSWFQRQLRGSQYQPTLRDHICKDMSALVAA----------------- 1420
Query: 663 DYERVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMERVMLKS------------ 705
R+ IP G+++RDLP + V + K+R++ ++ S
Sbjct: 1421 ---RMRHIPLAPGSDWRDLPNIEVRLSDGTLARKLRYNYHDKKNGCSSTGALRGVCSCVE 1477
Query: 706 GKPLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LL 750
GKP P A +F H +GRL WD +T VT +P + +L
Sbjct: 1478 GKPCEP-AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVL 1536
Query: 751 HPSQDRVLTIRENARLQGFPDCYQLFGPV 779
HP Q RV+++RE AR QGFPD Y+LFG +
Sbjct: 1537 HPEQHRVVSVRECARSQGFPDTYRLFGNI 1565
Score = 39.3 bits (90), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 741 KSYYKKVCIDSETLEVGDCVSVIPDDSSKPLYLARVAALWEDSSNGQMFHAHWFCAGTDT 800
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK ++
Sbjct: 801 V---LGATSDPLELFLVDECEDMQLSYIHSKVQV 831
>gi|344282771|ref|XP_003413146.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 1 [Loxodonta
africana]
Length = 1611
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 178/383 (46%), Gaps = 59/383 (15%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L
Sbjct: 1202 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1259
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P +KL
Sbjct: 1260 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKL 1319
Query: 556 PQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNN 609
P +P P H R V +F I ++ + + + D +SDLP V N
Sbjct: 1320 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEVRNG 1375
Query: 610 ESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCC 669
S E Y ++ FQ+ +R ++ + L DH ++ R+
Sbjct: 1376 ASALEISYNGEPQSWFQRQLRGTQYQPI-------------LRDHICKDMSALVAARMRH 1422
Query: 670 IPKRKGANFRDLPGVLVGPDN-----KVRWDP-------SMERVM------LKSGKPLVP 711
IP G+++RDLP + V + K+R+ S R + +++GK P
Sbjct: 1423 IPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGYSSNRALRGVCSCVEAGKACDP 1482
Query: 712 DYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDR 756
A +F H +GRL WD +T VT +P + +LHP Q R
Sbjct: 1483 -AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHR 1541
Query: 757 VLTIRENARLQGFPDCYQLFGPV 779
V+++RE AR QGFPD Y+LFG +
Sbjct: 1542 VVSVRECARSQGFPDTYRLFGNI 1564
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 739 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 798
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK K+
Sbjct: 799 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 829
>gi|46048774|ref|NP_996835.1| DNA (cytosine-5)-methyltransferase 1 [Gallus gallus]
gi|12230343|sp|Q92072.1|DNMT1_CHICK RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
AltName: Full=DNA methyltransferase GgaI; Short=DNA MTase
GgaI; Short=M.GgaI; AltName: Full=MCMT
gi|1109610|dbj|BAA07867.1| DNA (cytosine-5-)-methyltransferase [Gallus gallus]
gi|1096715|prf||2112268A DNA methyltransferase
Length = 1537
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 184/397 (46%), Gaps = 60/397 (15%)
Query: 427 LKEFVTKGYRSNIL----PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L + V G ++N L P GDV+ +CGGPPCQG SG NRF + KN ++ F
Sbjct: 1109 LLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSF 1166
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ +Y +P++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R
Sbjct: 1167 LSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRR 1226
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARG----VIPNEFQEIIVAYANNQPCQLEKGVLLSD 598
R + A P +KLP +P P H R V+ ++ + V+ + + + D
Sbjct: 1227 RAIVLAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKK--FVSNITRTYSGPFRTITVRD 1284
Query: 599 AISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQ 658
+SDLP + N S E Y ++ FQ+ IR ++ +L DH
Sbjct: 1285 TMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQ-------------PILRDHICKD 1331
Query: 659 VNNDDYERVCCIPKRKGANFRDLPGVLV-----GPDNKVRWDPSMERVMLKS-------- 705
++ R+ IP G+++RDLP + V K+R+ ++ S
Sbjct: 1332 MSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTSTRKLRYTHHEKKNGRSSSGALRGVC 1391
Query: 706 ----GKP--------------LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR 747
GKP +P + H + +GRL WD +T VT +P +
Sbjct: 1392 SCAEGKPCDPADRQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGK 1449
Query: 748 I--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+LHP Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 1450 QGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDK 1486
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 260 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 319
P++ LD++SGCG +S G +GV T WAI++ A ++ + N+P T V E
Sbjct: 1052 PKLRTLDVFSGCGGLSEGF----HQAGVS-ETLWAIEMWEPAAQAFRLNNPGTTVFTEDC 1106
Query: 320 DDFLSLL 326
+ L L+
Sbjct: 1107 NVLLKLV 1113
>gi|283462212|gb|ADB22400.1| DNA (cytosine-5-)-methyltransferase [Saccoglossus kowalevskii]
Length = 820
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 183/382 (47%), Gaps = 60/382 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP G V+ +CGGPPCQG SG NRF + + + KN ++ ++ +Y +PK+ L+ENV
Sbjct: 422 LPQKGQVELLCGGPPCQGFSGMNRFNSREYS--KFKNSLVVSYLSYCDYYRPKFFLLENV 479
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + + L+SM YQ G++ AG YG+ Q R R + A P +KLP YP
Sbjct: 480 RNFVSFKKSMVLKLTMRSLLSMGYQCTFGVVQAGLYGVAQTRRRAIILAAAPGEKLPFYP 539
Query: 560 LPTHEIVARG-----VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
P H R I + E +A + P + + + DA+SDLP + N ++ E
Sbjct: 540 EPAHVFSPRACPLSVTIDEKKYESNMARVWSAP---YRTITVRDALSDLPEIRNGYNKLE 596
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
Y A+ +QK IR +H +L DH +++ R+ IP
Sbjct: 597 MSYDREAQNGYQKAIRGSQHQ-------------PILRDHICKEMSALVEGRMRHIPLAP 643
Query: 675 GANFRDLPGVLV----------------------GPDNKVRWDPSMERVMLKSGKP---- 708
G+++RDLP + V GP+ ++R + M K P
Sbjct: 644 GSDWRDLPNIAVRLSDGNTCKKLRYLHPDKKNGKGPNGQLRGVCAC--AMNKPCDPTDRQ 701
Query: 709 ---LVPDYAMKF---EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTI 760
L+P + + H + +GR+ WD +T VT +P + +LHP Q RV+++
Sbjct: 702 FNTLIP-WCLPHTGNRHNNWAGLYGRVEWDGYFSTTVTNPEPMGKQGRVLHPEQHRVVSV 760
Query: 761 RENARLQGFPDCYQLFGPVKER 782
RE AR QGFPD Y+ +G + ++
Sbjct: 761 RECARSQGFPDTYRFYGTILDK 782
>gi|168805279|gb|ACA28713.1| DNA methyltransferase b [Bos taurus]
Length = 1348
Score = 165 bits (418), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 178/385 (46%), Gaps = 58/385 (15%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P+Y L
Sbjct: 923 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 980
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P + L
Sbjct: 981 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEPL 1040
Query: 556 PQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNN 609
P +P P H R V +F I ++ + + + D +SDLP + N
Sbjct: 1041 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIRNG 1096
Query: 610 ESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCC 669
S E Y ++ FQ+ +R ++ +L DH ++ R+
Sbjct: 1097 ASALEISYNGEPQSWFQRQLRGSQYQ-------------PILRDHICKDMSALVAARMRH 1143
Query: 670 IPKRKGANFRDLPGVLVGPDN-----KVRWDPSMERVMLKS------------GKPLVPD 712
IP G+++RDLP + V + K+R++ ++ S GKP P
Sbjct: 1144 IPLAPGSDWRDLPNIEVRLSDGTLARKLRYNYHDKKNGCSSSGALRGVCSCVEGKPCEPA 1203
Query: 713 YAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRV 757
A +F H +GRL WD +T VT +P + +LHP Q RV
Sbjct: 1204 -ARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRV 1262
Query: 758 LTIRENARLQGFPDCYQLFGPVKER 782
+++RE AR QGFPD Y+LFG + ++
Sbjct: 1263 VSVRECARSQGFPDTYRLFGNILDK 1287
Score = 39.3 bits (90), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 460 KSYYKKVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 519
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK ++
Sbjct: 520 V---LGATSDPLELFLVDECEDMQLSYIHSKVQV 550
>gi|327284227|ref|XP_003226840.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Anolis
carolinensis]
Length = 1553
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 183/397 (46%), Gaps = 60/397 (15%)
Query: 427 LKEFVTKGYRSNIL----PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L + V G ++N L P GDV+ +CGGPPCQG SG NRF + KN ++ F
Sbjct: 1131 LLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSF 1188
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ +Y +P++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R
Sbjct: 1189 LSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRR 1248
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARG----VIPNEFQEIIVAYANNQPCQLEKGVLLSD 598
R + A P +KLP +P P H R V+ ++ + V+ + + + D
Sbjct: 1249 RAIVLAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKK--FVSNITRTYSGPFRTITVRD 1306
Query: 599 AISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQ 658
+SDLP + N S E Y ++ FQ+ IR ++ +L DH
Sbjct: 1307 TMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQ-------------PILRDHICKD 1353
Query: 659 VNNDDYERVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMERVMLKSGKPL---- 709
++ R+ IP G+++RDLP + V + K+R+ ++ S L
Sbjct: 1354 MSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGITTRKLRYTHHEKKNGRSSTGALRGVC 1413
Query: 710 ----------------------VPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR 747
+P + H + +GRL WD +T VT +P +
Sbjct: 1414 SCAEGKACDPADRQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGK 1471
Query: 748 I--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+LHP Q RV+++RE AR QGFPD Y+LFG V ++
Sbjct: 1472 QGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNVLDK 1508
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 105 HYTQASVDGCLYNLGDDAYVKAEE-GAVDYIARIVELFESVDG-EPYFKARWFYRAEDTV 162
+Y + +D +GD V +E Y+ARI ++E V+ EP F WF R DTV
Sbjct: 678 YYQKVCIDSETLQIGDCVSVSPDEPTKALYLARITAMWEDVNSSEPMFHVHWFCRGTDTV 737
Query: 163 IKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
L D +FL D +D L+ I K +
Sbjct: 738 ---LGATSDPLELFLVDECEDMQLSYIHGKVNV 767
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 260 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 319
P++ LD++SGCG +S G A +S T WAI++ A ++ + N+P T V E
Sbjct: 1074 PKLRSLDVFSGCGGLSEGF-HQAEVS----ETLWAIEMWEPAAQAFRLNNPGTTVFTEDC 1128
Query: 320 DDFLSLL 326
+ L L+
Sbjct: 1129 NVLLKLV 1135
>gi|214010196|ref|NP_445806.3| DNA (cytosine-5)-methyltransferase 1 [Rattus norvegicus]
gi|149020535|gb|EDL78340.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_b [Rattus
norvegicus]
Length = 1621
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 173/382 (45%), Gaps = 60/382 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 1215 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1272
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1273 RNFVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1332
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
P H R V +F I ++ + + + D +SDLP + N S
Sbjct: 1333 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASAP 1388
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E Y ++ FQ+ +R + + L DH ++ R+ IP
Sbjct: 1389 EISYNGEPQSWFQRQLRGSHYQPI-------------LRDHICKDMSALVAARMRHIPLS 1435
Query: 674 KGANFRDLPGVLVG-----PDNKVRWDPSMERVMLKSGKPL------------------- 709
G+++RDLP + V NK+R+ + S L
Sbjct: 1436 PGSDWRDLPNIQVRLRDGVITNKLRYTFHDTKNGCSSTGALRGVCSCAEGKTCDPASRQF 1495
Query: 710 -------VPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTI 760
+P + H + +GRL WD +T VT +P + +LHP Q RV+++
Sbjct: 1496 NTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSV 1553
Query: 761 RENARLQGFPDCYQLFGPVKER 782
RE AR QGFPD Y+LFG + +R
Sbjct: 1554 RECARSQGFPDTYRLFGNILDR 1575
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG GL G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1138 IKLPKLRTLDVFSGCG----GLTEGFHQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFT 1192
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 1193 EDCNVLLKLV 1202
>gi|149020536|gb|EDL78341.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_c [Rattus
norvegicus]
Length = 1634
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 173/382 (45%), Gaps = 60/382 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 1228 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1285
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1286 RNFVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1345
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
P H R V +F I ++ + + + D +SDLP + N S
Sbjct: 1346 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASAP 1401
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E Y ++ FQ+ +R + + L DH ++ R+ IP
Sbjct: 1402 EISYNGEPQSWFQRQLRGSHYQPI-------------LRDHICKDMSALVAARMRHIPLS 1448
Query: 674 KGANFRDLPGVLVG-----PDNKVRWDPSMERVMLKSGKPL------------------- 709
G+++RDLP + V NK+R+ + S L
Sbjct: 1449 PGSDWRDLPNIQVRLRDGVITNKLRYTFHDTKNGCSSTGALRGVCSCAEGKTCDPASRQF 1508
Query: 710 -------VPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTI 760
+P + H + +GRL WD +T VT +P + +LHP Q RV+++
Sbjct: 1509 NTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSV 1566
Query: 761 RENARLQGFPDCYQLFGPVKER 782
RE AR QGFPD Y+LFG + +R
Sbjct: 1567 RECARSQGFPDTYRLFGNILDR 1588
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG GL G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1151 IKLPKLRTLDVFSGCG----GLTEGFHQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFT 1205
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 1206 EDCNVLLKLV 1215
>gi|338727207|ref|XP_001916472.2| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Equus caballus]
Length = 1619
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 177/390 (45%), Gaps = 73/390 (18%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P+Y L
Sbjct: 1210 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1267
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P +KL
Sbjct: 1268 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKL 1327
Query: 556 PQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNN 609
P +P P H R V +F I ++ + + + D +SDLP V N
Sbjct: 1328 PLFPEPLHVFAPRACQLSVVVDDRKFVSNITRLSSGP----FRTITVRDTMSDLPEVRNG 1383
Query: 610 ESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCC 669
S E Y ++ FQ+ +R ++ + L DH ++ R+
Sbjct: 1384 ASALEISYNGEPQSWFQRQLRGSQYQPI-------------LRDHICKDMSALVAARMRH 1430
Query: 670 IPKRKGANFRDLPGVLVGPDNKVRW-DPSMERVM-----------------------LKS 705
IP G+++RDLP + +VR D +M R + +++
Sbjct: 1431 IPLAPGSDWRDLPNI------EVRLSDGTMARKLRYTYHDRKNGRSSTGALRGVCSCVEA 1484
Query: 706 GKP--------------LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--L 749
GK +P + H + +GRL WD +T VT +P + +
Sbjct: 1485 GKACDSAARQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQGRV 1542
Query: 750 LHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
LHP Q RV+++RE AR QGFPD Y+LFG +
Sbjct: 1543 LHPEQHRVVSVRECARSQGFPDTYRLFGNI 1572
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 243 ASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHAC 302
A S + + + I P++ LD++SGCG +S G +G+ T WAI++ A
Sbjct: 1123 AKSQVCEPSEPKAEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAA 1177
Query: 303 KSLKFNHPETKVRNEAADDFLSLL 326
++ + N+P + V E + L L+
Sbjct: 1178 QAFRLNNPGSTVFTEDCNVLLKLV 1201
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 106 YTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVIK 164
Y Q +D +GD V ++ + Y+AR+ L+E F A WF DTV
Sbjct: 750 YKQVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDTV-- 807
Query: 165 DLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
L D +FL D +D L+ I SK K+
Sbjct: 808 -LGATSDPLELFLVDECEDMQLSYIHSKVKV 837
>gi|332852917|ref|XP_512361.3| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 11 [Pan
troglodytes]
gi|410226624|gb|JAA10531.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
gi|410308688|gb|JAA32944.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
Length = 1632
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 177/387 (45%), Gaps = 59/387 (15%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 1219 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 1276
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 1277 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1336
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 1337 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1392
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R ++ + L DH ++
Sbjct: 1393 VRNGASALEISYNGEPQSWFQRQLRGAQYQPI-------------LRDHICKDMSALVAA 1439
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMER-------------VMLKSGK 707
R+ IP G+++RDLP + V + K+R+ + +++GK
Sbjct: 1440 RMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGK 1499
Query: 708 PLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHP 752
P A +F H +GRL WD +T VT +P + +LHP
Sbjct: 1500 ACDP-AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHP 1558
Query: 753 SQDRVLTIRENARLQGFPDCYQLFGPV 779
Q RV+++RE AR QGFPD Y+LFG +
Sbjct: 1559 EQHRVVSVRECARSQGFPDTYRLFGNI 1585
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 760 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 819
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK K+
Sbjct: 820 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 850
>gi|195927037|ref|NP_001124295.1| DNA (cytosine-5)-methyltransferase 1 isoform a [Homo sapiens]
gi|116496659|gb|AAI26228.1| DNMT1 protein [Homo sapiens]
gi|219521538|gb|AAI44094.1| DNA (cytosine-5-)-methyltransferase 1 [Homo sapiens]
Length = 1632
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 177/387 (45%), Gaps = 59/387 (15%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 1219 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 1276
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 1277 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1336
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 1337 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1392
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R ++ + L DH ++
Sbjct: 1393 VRNGASALEISYNGEPQSWFQRQLRGAQYQPI-------------LRDHICKDMSALVAA 1439
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMER-------------VMLKSGK 707
R+ IP G+++RDLP + V + K+R+ + +++GK
Sbjct: 1440 RMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGK 1499
Query: 708 PLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHP 752
P A +F H +GRL WD +T VT +P + +LHP
Sbjct: 1500 ACDP-AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHP 1558
Query: 753 SQDRVLTIRENARLQGFPDCYQLFGPV 779
Q RV+++RE AR QGFPD Y+LFG +
Sbjct: 1559 EQHRVVSVRECARSQGFPDTYRLFGNI 1585
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 760 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 819
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK K+
Sbjct: 820 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 850
>gi|355755438|gb|EHH59185.1| DNA (cytosine-5)-methyltransferase 1 [Macaca fascicularis]
Length = 1541
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 178/390 (45%), Gaps = 59/390 (15%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 1128 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 1185
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 1186 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1245
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 1246 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1301
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R A +L DH ++
Sbjct: 1302 VRNGASALEISYNGEPQSWFQRQLR-------------GAQYQPILRDHICKDMSALVAA 1348
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMER-------------VMLKSGK 707
R+ IP G+++RDLP + V + K+R+ + +++GK
Sbjct: 1349 RMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGK 1408
Query: 708 PLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHP 752
P A +F H +GRL WD +T VT +P + +LHP
Sbjct: 1409 ACDP-AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHP 1467
Query: 753 SQDRVLTIRENARLQGFPDCYQLFGPVKER 782
Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 1468 EQHRVVSVRECARSQGFPDTYRLFGNILDK 1497
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE-SVDGEPYFKARWFYRAED 160
+ +Y + +D +GD V ++ + Y+AR+ L+E S++G+ F A WF D
Sbjct: 669 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSINGQ-MFHAHWFCAGTD 727
Query: 161 TVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
TV L D +FL D +D L+ I SK K+
Sbjct: 728 TV---LGATSDPLELFLVDECEDMQLSYIHSKVKV 759
>gi|441628422|ref|XP_003275776.2| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 1
isoform 1 [Nomascus leucogenys]
Length = 1616
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 177/387 (45%), Gaps = 59/387 (15%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 1203 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 1260
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 1261 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1320
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 1321 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1376
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R ++ + L DH ++
Sbjct: 1377 VRNGASALEISYNGEPQSWFQRQLRGTQYQPI-------------LRDHICKDMSALVAA 1423
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMER-------------VMLKSGK 707
R+ IP G+++RDLP + V + K+R+ + +++GK
Sbjct: 1424 RMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGK 1483
Query: 708 PLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHP 752
P A +F H +GRL WD +T VT +P + +LHP
Sbjct: 1484 ACDP-AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHP 1542
Query: 753 SQDRVLTIRENARLQGFPDCYQLFGPV 779
Q RV+++RE AR QGFPD Y+LFG +
Sbjct: 1543 EQHRVVSVRECARSQGFPDTYRLFGNI 1569
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 744 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 803
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK K+
Sbjct: 804 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 834
>gi|355703123|gb|EHH29614.1| DNA (cytosine-5)-methyltransferase 1 [Macaca mulatta]
Length = 1632
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 179/390 (45%), Gaps = 59/390 (15%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 1219 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 1276
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 1277 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1336
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 1337 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1392
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R ++ + L DH ++
Sbjct: 1393 VRNGASALEISYNGEPQSWFQRQLRGAQYQPI-------------LRDHICKDMSALVAA 1439
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMER-------------VMLKSGK 707
R+ IP G+++RDLP + V + K+R+ + +++GK
Sbjct: 1440 RMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGK 1499
Query: 708 PLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHP 752
P A +F H +GRL WD +T VT +P + +LHP
Sbjct: 1500 ACDP-AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHP 1558
Query: 753 SQDRVLTIRENARLQGFPDCYQLFGPVKER 782
Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 1559 EQHRVVSVRECARSQGFPDTYRLFGNILDK 1588
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE-SVDGEPYFKARWFYRAED 160
+ +Y + +D +GD V ++ + Y+AR+ L+E S++G+ F A WF D
Sbjct: 760 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSINGQ-MFHAHWFCAGTD 818
Query: 161 TVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
TV L D +FL D +D L+ I SK K+
Sbjct: 819 TV---LGATSDPLELFLVDECEDMQLSYIHSKVKV 850
>gi|62204780|gb|AAH92517.1| DNMT1 protein [Homo sapiens]
Length = 1511
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 179/390 (45%), Gaps = 59/390 (15%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 1098 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 1155
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 1156 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1215
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 1216 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1271
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R ++ + L DH ++
Sbjct: 1272 VRNGASALEISYNGEPQSWFQRQLRGAQYQPI-------------LRDHICKDMSALVAA 1318
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMER-------------VMLKSGK 707
R+ IP G+++RDLP + V + K+R+ + +++GK
Sbjct: 1319 RMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGK 1378
Query: 708 PLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHP 752
P A +F H +GRL WD +T VT +P + +LHP
Sbjct: 1379 ACDP-AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHP 1437
Query: 753 SQDRVLTIRENARLQGFPDCYQLFGPVKER 782
Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 1438 EQHRVVSVRECARSQGFPDTYRLFGNILDK 1467
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 639 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 698
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK K+
Sbjct: 699 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 729
>gi|410053162|ref|XP_003953403.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Pan troglodytes]
Length = 1511
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 179/390 (45%), Gaps = 59/390 (15%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 1098 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 1155
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 1156 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1215
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 1216 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1271
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R ++ + L DH ++
Sbjct: 1272 VRNGASALEISYNGEPQSWFQRQLRGAQYQPI-------------LRDHICKDMSALVAA 1318
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMER-------------VMLKSGK 707
R+ IP G+++RDLP + V + K+R+ + +++GK
Sbjct: 1319 RMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGK 1378
Query: 708 PLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHP 752
P A +F H +GRL WD +T VT +P + +LHP
Sbjct: 1379 ACDP-AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHP 1437
Query: 753 SQDRVLTIRENARLQGFPDCYQLFGPVKER 782
Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 1438 EQHRVVSVRECARSQGFPDTYRLFGNILDK 1467
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 639 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 698
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK K+
Sbjct: 699 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 729
>gi|149020534|gb|EDL78339.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Rattus
norvegicus]
Length = 1503
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 173/382 (45%), Gaps = 60/382 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 1097 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1154
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1155 RNFVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1214
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
P H R V +F I ++ + + + D +SDLP + N S
Sbjct: 1215 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASAP 1270
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E Y ++ FQ+ +R + +L DH ++ R+ IP
Sbjct: 1271 EISYNGEPQSWFQRQLRGSHYQ-------------PILRDHICKDMSALVAARMRHIPLS 1317
Query: 674 KGANFRDLPGVLVG-----PDNKVRWDPSMERVMLKSGKPL------------------- 709
G+++RDLP + V NK+R+ + S L
Sbjct: 1318 PGSDWRDLPNIQVRLRDGVITNKLRYTFHDTKNGCSSTGALRGVCSCAEGKTCDPASRQF 1377
Query: 710 -------VPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTI 760
+P + H + +GRL WD +T VT +P + +LHP Q RV+++
Sbjct: 1378 NTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSV 1435
Query: 761 RENARLQGFPDCYQLFGPVKER 782
RE AR QGFPD Y+LFG + +R
Sbjct: 1436 RECARSQGFPDTYRLFGNILDR 1457
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG GL G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1020 IKLPKLRTLDVFSGCG----GLTEGFHQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFT 1074
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 1075 EDCNVLLKLV 1084
>gi|410226626|gb|JAA10532.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
gi|410308690|gb|JAA32945.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
Length = 1616
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 177/387 (45%), Gaps = 59/387 (15%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 1203 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 1260
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 1261 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1320
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 1321 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1376
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R ++ + L DH ++
Sbjct: 1377 VRNGASALEISYNGEPQSWFQRQLRGAQYQPI-------------LRDHICKDMSALVAA 1423
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMER-------------VMLKSGK 707
R+ IP G+++RDLP + V + K+R+ + +++GK
Sbjct: 1424 RMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGK 1483
Query: 708 PLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHP 752
P A +F H +GRL WD +T VT +P + +LHP
Sbjct: 1484 ACDP-AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHP 1542
Query: 753 SQDRVLTIRENARLQGFPDCYQLFGPV 779
Q RV+++RE AR QGFPD Y+LFG +
Sbjct: 1543 EQHRVVSVRECARSQGFPDTYRLFGNI 1569
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 744 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 803
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK K+
Sbjct: 804 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 834
>gi|4503351|ref|NP_001370.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Homo sapiens]
gi|12231019|sp|P26358.2|DNMT1_HUMAN RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
AltName: Full=CXXC-type zinc finger protein 9; AltName:
Full=DNA methyltransferase HsaI; Short=DNA MTase HsaI;
Short=M.HsaI; AltName: Full=MCMT
gi|1632819|emb|CAA45219.1| DNA (cytosine-5-)-methyltransferase [Homo sapiens]
Length = 1616
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 177/387 (45%), Gaps = 59/387 (15%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 1203 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 1260
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 1261 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1320
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 1321 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1376
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R ++ + L DH ++
Sbjct: 1377 VRNGASALEISYNGEPQSWFQRQLRGAQYQPI-------------LRDHICKDMSALVAA 1423
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMER-------------VMLKSGK 707
R+ IP G+++RDLP + V + K+R+ + +++GK
Sbjct: 1424 RMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGK 1483
Query: 708 PLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHP 752
P A +F H +GRL WD +T VT +P + +LHP
Sbjct: 1484 ACDP-AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHP 1542
Query: 753 SQDRVLTIRENARLQGFPDCYQLFGPV 779
Q RV+++RE AR QGFPD Y+LFG +
Sbjct: 1543 EQHRVVSVRECARSQGFPDTYRLFGNI 1569
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 744 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 803
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK K+
Sbjct: 804 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 834
>gi|403296174|ref|XP_003938993.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Saimiri boliviensis
boliviensis]
Length = 1683
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 179/390 (45%), Gaps = 59/390 (15%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 1271 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 1328
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 1329 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1388
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 1389 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1444
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R ++ + L DH ++
Sbjct: 1445 VRNGASALEISYNGEPQSWFQRQLRGTQYQPI-------------LRDHICKDMSALVAA 1491
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMER-------------VMLKSGK 707
R+ IP G+++RDLP + V + K+R+ + +++GK
Sbjct: 1492 RMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGK 1551
Query: 708 PLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHP 752
P A +F H +GRL WD +T VT +P + +LHP
Sbjct: 1552 ACDP-AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHP 1610
Query: 753 SQDRVLTIRENARLQGFPDCYQLFGPVKER 782
Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 1611 EQHRVVSVRECARSQGFPDTYRLFGNILDK 1640
>gi|380786361|gb|AFE65056.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Macaca mulatta]
Length = 1616
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 177/387 (45%), Gaps = 59/387 (15%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 1203 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 1260
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 1261 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1320
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 1321 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1376
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R ++ + L DH ++
Sbjct: 1377 VRNGASALEISYNGEPQSWFQRQLRGAQYQPI-------------LRDHICKDMSALVAA 1423
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMER-------------VMLKSGK 707
R+ IP G+++RDLP + V + K+R+ + +++GK
Sbjct: 1424 RMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGK 1483
Query: 708 PLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHP 752
P A +F H +GRL WD +T VT +P + +LHP
Sbjct: 1484 ACDP-AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHP 1542
Query: 753 SQDRVLTIRENARLQGFPDCYQLFGPV 779
Q RV+++RE AR QGFPD Y+LFG +
Sbjct: 1543 EQHRVVSVRECARSQGFPDTYRLFGNI 1569
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE-SVDGEPYFKARWFYRAED 160
+ +Y + +D +GD V ++ + Y+AR+ L+E S++G+ F A WF D
Sbjct: 744 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSINGQ-MFHAHWFCAGTD 802
Query: 161 TVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
TV L D +FL D +D L+ I SK K+
Sbjct: 803 TV---LGATSDPLELFLVDECEDMQLSYIHSKVKV 834
>gi|345786497|ref|XP_533919.3| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Canis lupus
familiaris]
Length = 1611
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 176/387 (45%), Gaps = 61/387 (15%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P+Y L
Sbjct: 1204 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1261
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P +KL
Sbjct: 1262 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKL 1321
Query: 556 PQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNN 609
P +P P H R V +F I ++ + + + D +SDLP V N
Sbjct: 1322 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEVRNG 1377
Query: 610 ESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCC 669
S E Y ++ FQ+ +R ++ + L DH ++ R+
Sbjct: 1378 ASALEILYNGEPQSWFQRQLRGSQYQPI-------------LRDHICKDMSALVAARMRH 1424
Query: 670 IPKRKGANFRDLPGVLVGPDN-----KVRWDPSMERVMLKSGKPL--------------- 709
IP G+++RDLP + V + K+R+ ++ S L
Sbjct: 1425 IPLAPGSDWRDLPNIEVRLSDGTMARKLRYTYHDKKNGCSSTGALRGVCSCVEAGKACDS 1484
Query: 710 ------------VPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQD 755
+P + H + +GRL WD +T VT +P + +LHP Q
Sbjct: 1485 AARQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQH 1542
Query: 756 RVLTIRENARLQGFPDCYQLFGPVKER 782
RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 1543 RVVSVRECARSQGFPDTYRLFGNILDK 1569
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 105 HYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVI 163
+Y + +D +GD V ++ + Y+AR+ L+E F A WF DTV
Sbjct: 743 YYKKVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDGSNGQMFHAHWFCAGTDTV- 801
Query: 164 KDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
L D +FL D +D L+ I SK K+
Sbjct: 802 --LGATSDPLELFLVDECEDMQLSYIHSKVKV 831
>gi|410950440|ref|XP_003981913.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Felis catus]
Length = 1610
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 174/384 (45%), Gaps = 61/384 (15%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P+Y L
Sbjct: 1201 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1258
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P +KL
Sbjct: 1259 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKL 1318
Query: 556 PQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNN 609
P +P P H R V +F I ++ + + + D +SDLP V N
Sbjct: 1319 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEVRNG 1374
Query: 610 ESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCC 669
S E Y ++ FQ+ +R ++ + L DH ++ R+
Sbjct: 1375 ASALEILYNGEPQSWFQRQLRGSQYQPI-------------LRDHICKDMSALVAARMRH 1421
Query: 670 IPKRKGANFRDLPGVLVGPDN-----KVRWDPSMERVMLKSGKPL--------------- 709
IP G+++RDLP + V + K+R+ ++ S L
Sbjct: 1422 IPLAPGSDWRDLPNIEVRLSDGTMARKLRYTYHDKKNGCSSTGALRGVCSCVEAGKACDS 1481
Query: 710 ------------VPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQD 755
+P + H + +GRL WD +T VT +P + +LHP Q
Sbjct: 1482 AARQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQH 1539
Query: 756 RVLTIRENARLQGFPDCYQLFGPV 779
RV+++RE AR QGFPD Y+LFG +
Sbjct: 1540 RVVSVRECARSQGFPDTYRLFGNI 1563
Score = 39.3 bits (90), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ ++ + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 738 KSYFKKVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 797
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK K+
Sbjct: 798 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 828
>gi|395750441|ref|XP_002828696.2| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 1
[Pongo abelii]
Length = 1602
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 1189 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 1246
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 1247 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1306
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 1307 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1362
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R A +L DH ++
Sbjct: 1363 VRNGASALEISYNGEPQSWFQRQLR-------------GAQYQPILRDHICKDMSALVAA 1409
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMER-------------VMLKSGK 707
R+ IP G+++RDLP + V + K+R+ + +++GK
Sbjct: 1410 RMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGK 1469
Query: 708 PLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHP 752
P A +F H +GRL WD +T VT +P + +LHP
Sbjct: 1470 ACDP-AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHP 1528
Query: 753 SQDRVLTIRENARLQGFPDCYQLFGPV 779
Q RV+++RE AR QGFPD Y+LFG +
Sbjct: 1529 EQHRVVSVRECARSQGFPDTYRLFGNI 1555
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 731 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 790
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK K+
Sbjct: 791 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 821
>gi|332023953|gb|EGI64171.1| DNA (cytosine-5)-methyltransferase PliMCI [Acromyrmex echinatior]
Length = 1449
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 179/386 (46%), Gaps = 67/386 (17%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF Q +L KN ++ F+ +Y +PK+ +MENV
Sbjct: 1014 LPQKGDVELLCGGPPCQGFSGMNRFNLRQYSL--FKNSLIVTFLSYCDYYRPKFFVMENV 1071
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + + + + L+ M YQ GI+ AGSYG+PQ R R+ L A P + LP++P
Sbjct: 1072 RNFVFCKKSMVLKLTLRCLIRMGYQCTFGILQAGSYGVPQTRRRMILLAAAPGEILPKFP 1131
Query: 560 LPTHEIVARGV-----------IPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTN 608
+PTH R I N Q+ Y + + + DA+ DLP +
Sbjct: 1132 IPTHVFSKRCCSLAVIVDSKRYITNCVQKESAPY---------RAITVKDALYDLPEIKC 1182
Query: 609 NESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVC 668
+ +E Y T FQ+ +R + + S L DH +++ R+
Sbjct: 1183 GSNIEEMSYVGEPITHFQRKMRGKPYQ-------------SKLTDHICKEMSPLVEARMS 1229
Query: 669 CIPKRKGANFRDLPGVLVG--------------PDNKV-RWDPSMERVMLKSG--KPLVP 711
IP G+++RDLP ++V D +V R + R + + K L
Sbjct: 1230 YIPTTNGSDWRDLPNIVVQLSDGTYTKKLDYMYNDKRVGRSKTNAFRGVCRCSIRKQLCD 1289
Query: 712 DYAMKFE-------------HQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDR 756
+F H + +GR+ W +T +T +P + +LHP Q+R
Sbjct: 1290 PTDKQFNTLIPWCLPHTASRHNNWKGLYGRIEWSGFFSTTITNPEPMGKQGRVLHPVQNR 1349
Query: 757 VLTIRENARLQGFPDCYQLFGPVKER 782
V+++RE AR QGF D Y+ FG + ++
Sbjct: 1350 VVSVRECARSQGFLDSYRFFGTITDK 1375
>gi|281337410|gb|EFB12994.1| hypothetical protein PANDA_010327 [Ailuropoda melanoleuca]
Length = 1576
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 174/384 (45%), Gaps = 61/384 (15%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P+Y L
Sbjct: 1167 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1224
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P +KL
Sbjct: 1225 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKL 1284
Query: 556 PQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNN 609
P +P P H R V +F I ++ + + + D +SDLP V N
Sbjct: 1285 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEVRNG 1340
Query: 610 ESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCC 669
S E Y ++ FQ+ +R ++ + L DH ++ R+
Sbjct: 1341 ASALEILYNGEPQSWFQRQLRGSQYQPI-------------LRDHICKDMSALVAARMRH 1387
Query: 670 IPKRKGANFRDLPGVLVGPDN-----KVRWDPSMERVMLKSGKPL--------------- 709
IP G+++RDLP + V + K+R+ ++ S L
Sbjct: 1388 IPLAPGSDWRDLPNIEVRLSDGTMARKLRYTYHDKKNGCSSTGALRGVCSCVEAGKACDS 1447
Query: 710 ------------VPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQD 755
+P + H + +GRL WD +T VT +P + +LHP Q
Sbjct: 1448 AARQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQH 1505
Query: 756 RVLTIRENARLQGFPDCYQLFGPV 779
RV+++RE AR QGFPD Y+LFG +
Sbjct: 1506 RVVSVRECARSQGFPDTYRLFGNI 1529
Score = 39.3 bits (90), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 105 HYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVI 163
++ + +D +GD V ++ + Y+AR+ L+E F A WF DTV
Sbjct: 706 YFKKVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDTV- 764
Query: 164 KDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
L D +FL D +D L+ I SK K+
Sbjct: 765 --LGATSDPLELFLVDECEDMQLSYIHSKVKV 794
>gi|156365066|ref|XP_001626663.1| predicted protein [Nematostella vectensis]
gi|156213548|gb|EDO34563.1| predicted protein [Nematostella vectensis]
Length = 1263
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 176/382 (46%), Gaps = 60/382 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
+P G+V+ +CGGPPCQG SG NRF + +L KN ++ ++ ++ +P++ ++ENV
Sbjct: 861 IPQRGEVELLCGGPPCQGFSGMNRFNTREYSL--FKNSLVVSYLSYCDFYRPRFFILENV 918
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + + L+ M YQ G++ AG YG+PQ R R + A P ++LP YP
Sbjct: 919 RNFVSFKKSMVLKLTLRCLLRMGYQCTFGVLQAGCYGVPQTRRRAIIMAAAPGEELPLYP 978
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
PTH R V +F I A+ + + + DA+SDLP + N S
Sbjct: 979 EPTHCFSPRTCQLTVMVDEKKFTSNITRTASAP----YRTITVRDAMSDLPEIRNGASAA 1034
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E Y A + FQ+ IR ++ LL DH +++ R+ IP
Sbjct: 1035 ESSYEGEAISHFQRQIRGNQYQ-------------PLLRDHICKEMSALVEARMRHIPLA 1081
Query: 674 KGANFRDLP--------GVLVGPDNKVRWDPSMER---------VMLKSGKP-------- 708
G+++RDLP G D E+ G+P
Sbjct: 1082 PGSDWRDLPNKEIRLSDGTYSKKLQYTHHDKKNEKGSSQRLRGVCSCAEGRPCEPADRQF 1141
Query: 709 ------LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTI 760
+P + H + +GRL WD +T +T +P + +LHP Q RV+++
Sbjct: 1142 NTLIPWCLPHTGNRHNHWAGL--YGRLEWDGYFSTTITNPEPMGKQGRVLHPEQHRVVSV 1199
Query: 761 RENARLQGFPDCYQLFGPVKER 782
RE AR QGFPD Y+ +G + ++
Sbjct: 1200 RECARSQGFPDTYRFYGSILDK 1221
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 105 HYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVI 163
+Y+ ++ +LGD V ++ + YI + ++ES GE F ARW R +TV+
Sbjct: 391 YYSSVLINKKKVSLGDFVKVCPDDPHIPLYIGCVQYMWESSSGEKLFHARWMTRGAETVL 450
Query: 164 KDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIA 196
+ A D +FL D DDNPL ++ ++
Sbjct: 451 GETA---DSAELFLCDDCDDNPLGSVLETCEVT 480
>gi|114675304|ref|XP_001163764.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 10 [Pan
troglodytes]
Length = 1678
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 177/387 (45%), Gaps = 59/387 (15%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 1265 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 1322
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 1323 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1382
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 1383 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1438
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R ++ + L DH ++
Sbjct: 1439 VRNGASALEISYNGEPQSWFQRQLRGAQYQPI-------------LRDHICKDMSALVAA 1485
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMER-------------VMLKSGK 707
R+ IP G+++RDLP + V + K+R+ + +++GK
Sbjct: 1486 RMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGK 1545
Query: 708 PLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHP 752
P A +F H +GRL WD +T VT +P + +LHP
Sbjct: 1546 ACDP-AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHP 1604
Query: 753 SQDRVLTIRENARLQGFPDCYQLFGPV 779
Q RV+++RE AR QGFPD Y+LFG +
Sbjct: 1605 EQHRVVSVRECARSQGFPDTYRLFGNI 1631
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 806 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 865
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK K+
Sbjct: 866 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 896
>gi|8132067|gb|AAF73200.1|AF152342_1 DNA-(cytosine-5)-methyltransferase [Xiphophorus maculatus x
Xiphophorus hellerii]
Length = 1503
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 180/395 (45%), Gaps = 56/395 (14%)
Query: 427 LKEFVTKGYRSNIL----PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L + V G ++N L P GDV+ +CGGPPCQG SG NRF + KN ++ +
Sbjct: 1080 LLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSY 1137
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ +Y +PK+ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R
Sbjct: 1138 LSYCDYYRPKFFLLENVRNFVSFKNSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRR 1197
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARG----VIPNEFQEIIVAYANNQPCQLEKGVLLSD 598
R + A P +KLP+YP P H R V +E + + N + + + + D
Sbjct: 1198 RAIILAAAPGEKLPRYPEPLHVFAPRACSLTVAVDEKKYVSNVTRGNG--GIYRTITVRD 1255
Query: 599 AISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQ 658
+SDLP + N + E Y ++ FQ+ IR ++ +L DH
Sbjct: 1256 TMSDLPEIRNGAASLEISYNGEPQSWFQRQIRGSQYQ-------------PILRDHICKD 1302
Query: 659 VNNDDYERVCCIPKRKGANFRDLPGVLV-----GPDNKVRW-----------DPSMERVM 702
++ R+ IP G+++RDLP + V K+R+ ++ V
Sbjct: 1303 MSALVEARMRHIPLAPGSDWRDLPNIEVRLKDGTTTKKLRYTHHDKKNGRSSTGALRGVC 1362
Query: 703 LKSGKPLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI- 748
+G +F H +GRL WD +T VT +P +
Sbjct: 1363 TCAGGKTCDSADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQG 1422
Query: 749 -LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+LH Q RV+++RE AR QGFPD Y+ FG + ++
Sbjct: 1423 RVLHAEQHRVVSVRECARSQGFPDTYRFFGNILDK 1457
>gi|119604485|gb|EAW84079.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Homo sapiens]
gi|119604486|gb|EAW84080.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Homo sapiens]
Length = 1678
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 177/387 (45%), Gaps = 59/387 (15%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 1265 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 1322
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 1323 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1382
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 1383 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1438
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R ++ + L DH ++
Sbjct: 1439 VRNGASALEISYNGEPQSWFQRQLRGAQYQPI-------------LRDHICKDMSALVAA 1485
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMER-------------VMLKSGK 707
R+ IP G+++RDLP + V + K+R+ + +++GK
Sbjct: 1486 RMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGK 1545
Query: 708 PLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHP 752
P A +F H +GRL WD +T VT +P + +LHP
Sbjct: 1546 ACDP-AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHP 1604
Query: 753 SQDRVLTIRENARLQGFPDCYQLFGPV 779
Q RV+++RE AR QGFPD Y+LFG +
Sbjct: 1605 EQHRVVSVRECARSQGFPDTYRLFGNI 1631
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 806 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 865
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK K+
Sbjct: 866 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 896
>gi|449674400|ref|XP_002155714.2| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Hydra
magnipapillata]
Length = 1283
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 192/403 (47%), Gaps = 67/403 (16%)
Query: 423 CKEKLKEFVTKGYRSNI---LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQL 479
C LK+ + + ++ LP G+VD +CGGPPCQG SG NRF + ++ KN +
Sbjct: 858 CNNVLKQIMEGKEKDDLGQRLPRRGEVDLLCGGPPCQGFSGMNRFNQREYSM--FKNSLV 915
Query: 480 LVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQ 539
++ +Y +PK+ ++ENV + + F + + + LV M YQ G++ AGSYG+PQ
Sbjct: 916 TSYLSYCDYFRPKFFILENVRNFVSFKKSMVLKLTLSCLVKMGYQCEFGVLQAGSYGVPQ 975
Query: 540 FRLRVFLWGARPFKKLPQYPLPTHEIVARG----VIPNEFQEIIVAYANNQPCQLEKGVL 595
R R + A P + LP++P P H ++ V N + + ++ P +
Sbjct: 976 TRRRAIIIAAAPGEILPKFPEPQHVFASKALSLSVTINSHKYQALKRLHSAP---YRTTT 1032
Query: 596 LSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHR 655
+ DA+SDLP + N ++ E Y T T FQK IR + V+ R + D
Sbjct: 1033 VYDAMSDLPEIKNGANKMEIGYDTEPLTHFQKKIRGKHMQVL---------RDHICKDMS 1083
Query: 656 PFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVML------------ 703
P Y + CIP G+++RDLP +V K+R D + +++L
Sbjct: 1084 PLVEARMSY--IPCIP---GSDWRDLPNKVV----KLR-DGNTTKLLLYLHKDKKQGPGK 1133
Query: 704 ----------KSGKPLVPD---------YAMKF---EHQSSTKPFGRLWWDEIVNTVVTR 741
+GKP P + + H + +GRL WD +T VT
Sbjct: 1134 NGENRGVCACANGKPCDPSDRQFNTLIPWCLPHTGNRHNNWAGLYGRLEWDGFFSTTVTN 1193
Query: 742 AQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+P + +LHP Q RV+++RE +R QGFPD ++ +G + ++
Sbjct: 1194 PEPMGKQGRVLHPEQHRVVSVRECSRSQGFPDSFRFYGNILDK 1236
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 106 YTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVIK 164
Y ++ L N+G+ V + + YI R++ ++E ++G+ F A+W YR+ +TV+
Sbjct: 452 YKSVQINNELINIGEFVQVYPTDPSDPLYICRVMYMWEDLNGDKKFHAQWLYRSSETVLG 511
Query: 165 DLACLVDRKRVFLSDVEDDNPLNCIVSKAKIA 196
++ D VFLSD DD L I+SK ++
Sbjct: 512 EVG---DPSEVFLSDDCDDIKLGAIMSKCNVS 540
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 261 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAAD 320
++ LD+++GCG +S GL GV + + WAI+ P A ++ + N+P V N+ +
Sbjct: 805 KLRTLDIFAGCGGLSEGL----DQVGV-VNSCWAIEFEPSAAQAYRLNNPSAIVFNQDCN 859
Query: 321 DFLSLLKE 328
+ L + E
Sbjct: 860 NVLKQIME 867
>gi|4160670|dbj|BAA37118.1| DNA cytosine 5 methyltransferase [Rattus rattus]
Length = 1622
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 173/382 (45%), Gaps = 60/382 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 1216 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1273
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1274 RNSVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1333
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
P H R V +F I ++ + + + D +SDLP + N S
Sbjct: 1334 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASAP 1389
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E Y ++ FQ+ +R + + L DH ++ R+ IP
Sbjct: 1390 EISYNGEPQSWFQRQLRGSHYQPI-------------LRDHICKDMSALVAARMRHIPLS 1436
Query: 674 KGANFRDLPGVLVG-----PDNKVRWDPSMERVMLKSGKPL------------------- 709
G+++RDLP + V NK+R+ + S L
Sbjct: 1437 PGSDWRDLPNIQVRLRDGVITNKLRYTFHDTKNGCSSTGALRGVCSCAEGKTCDPASRQF 1496
Query: 710 -------VPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTI 760
+P + H + +GRL WD +T VT +P + +LHP Q RV+++
Sbjct: 1497 NTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSV 1554
Query: 761 RENARLQGFPDCYQLFGPVKER 782
RE AR QGFPD Y+LFG + +R
Sbjct: 1555 RECARSQGFPDTYRLFGNILDR 1576
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG GL G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1139 IKLPKLRTLDVFSGCG----GLTEGFHQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFT 1193
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 1194 EDCNVLLKLV 1203
>gi|395851079|ref|XP_003798094.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Otolemur garnettii]
Length = 1620
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 178/386 (46%), Gaps = 59/386 (15%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L
Sbjct: 1211 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1268
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P +KL
Sbjct: 1269 LENVRNFVSFKRSMVLKLTLCCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKL 1328
Query: 556 PQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNN 609
P +P P H R V +F I ++ + + + D +SDLP + N
Sbjct: 1329 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIRNG 1384
Query: 610 ESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCC 669
S E Y ++ FQ+ +R ++ + L DH ++ R+
Sbjct: 1385 ASALEILYNGEPQSWFQRQLRGSQYQPI-------------LRDHICKDMSALVAARMRH 1431
Query: 670 IPKRKGANFRDLPGVLVGPDN-----KVRWDPSMER-------------VMLKSGKPLVP 711
IP G+++RDLP + V + K+R+ R +++GK P
Sbjct: 1432 IPLAPGSDWRDLPNIEVRLSDGTMARKLRYTYHDRRNGRSSSGALRGVCSCVEAGKACDP 1491
Query: 712 DYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDR 756
A +F H +GRL WD +T VT +P + +LHP Q R
Sbjct: 1492 -VARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHR 1550
Query: 757 VLTIRENARLQGFPDCYQLFGPVKER 782
V+++RE AR QGFPD Y+LFG + ++
Sbjct: 1551 VVSVRECARSQGFPDTYRLFGNILDK 1576
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 748 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 807
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK K+
Sbjct: 808 V---LGATSDPLELFLVDECEDMQLSYIYSKVKV 838
>gi|301772046|ref|XP_002921451.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Ailuropoda melanoleuca]
Length = 1676
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 174/384 (45%), Gaps = 61/384 (15%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P+Y L
Sbjct: 1267 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1324
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P +KL
Sbjct: 1325 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKL 1384
Query: 556 PQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNN 609
P +P P H R V +F I ++ + + + D +SDLP V N
Sbjct: 1385 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEVRNG 1440
Query: 610 ESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCC 669
S E Y ++ FQ+ +R ++ + L DH ++ R+
Sbjct: 1441 ASALEILYNGEPQSWFQRQLRGSQYQPI-------------LRDHICKDMSALVAARMRH 1487
Query: 670 IPKRKGANFRDLPGVLVGPDN-----KVRWDPSMERVMLKSGKPL--------------- 709
IP G+++RDLP + V + K+R+ ++ S L
Sbjct: 1488 IPLAPGSDWRDLPNIEVRLSDGTMARKLRYTYHDKKNGCSSTGALRGVCSCVEAGKACDS 1547
Query: 710 ------------VPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQD 755
+P + H + +GRL WD +T VT +P + +LHP Q
Sbjct: 1548 AARQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQH 1605
Query: 756 RVLTIRENARLQGFPDCYQLFGPV 779
RV+++RE AR QGFPD Y+LFG +
Sbjct: 1606 RVVSVRECARSQGFPDTYRLFGNI 1629
Score = 39.3 bits (90), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 105 HYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVI 163
++ + +D +GD V ++ + Y+AR+ L+E F A WF DTV
Sbjct: 806 YFKKVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDTV- 864
Query: 164 KDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
L D +FL D +D L+ I SK K+
Sbjct: 865 --LGATSDPLELFLVDECEDMQLSYIHSKVKV 894
>gi|383408753|gb|AFH27590.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Macaca mulatta]
Length = 1616
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 177/387 (45%), Gaps = 59/387 (15%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 1203 TPTSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 1260
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 1261 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1320
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 1321 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1376
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R ++ + L DH ++
Sbjct: 1377 VRNGASALEISYNGEPQSWFQRQLRGAQYQPI-------------LRDHICKDMSALVAA 1423
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMER-------------VMLKSGK 707
R+ IP G+++RDLP + V + K+R+ + +++GK
Sbjct: 1424 RMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGK 1483
Query: 708 PLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHP 752
P A +F H +GRL WD +T VT +P + +LHP
Sbjct: 1484 ACDP-AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHP 1542
Query: 753 SQDRVLTIRENARLQGFPDCYQLFGPV 779
Q RV+++RE AR QGFPD Y+LFG +
Sbjct: 1543 EQHRVVSVRECARSQGFPDTYRLFGNI 1569
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE-SVDGEPYFKARWFYRAED 160
+ +Y + +D +GD V ++ + Y+AR+ L+E S++G+ F A WF D
Sbjct: 744 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSINGQ-MFHAHWFCAGTD 802
Query: 161 TVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
TV L D +FL D +D L+ I SK K+
Sbjct: 803 TV---LGATSDPLELFLVDECEDMQLSYIHSKVKV 834
>gi|397476607|ref|XP_003809690.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Pan paniscus]
Length = 1631
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 177/387 (45%), Gaps = 59/387 (15%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 1218 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 1275
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 1276 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1335
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 1336 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1391
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R ++ + L DH ++
Sbjct: 1392 VRNGASALEISYNGEPQSWFQRQLRGAQYQPI-------------LRDHICKDMSALVAA 1438
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMER-------------VMLKSGK 707
R+ IP G+++RDLP + V + K+R+ + +++GK
Sbjct: 1439 RMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGK 1498
Query: 708 PLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHP 752
P A +F H +GRL WD +T VT +P + +LHP
Sbjct: 1499 ACDP-AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHP 1557
Query: 753 SQDRVLTIRENARLQGFPDCYQLFGPV 779
Q RV+++RE AR QGFPD Y+LFG +
Sbjct: 1558 EQHRVVSVRECARSQGFPDTYRLFGNI 1584
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 759 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 818
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK K+
Sbjct: 819 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 849
>gi|348550184|ref|XP_003460912.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Cavia porcellus]
Length = 1681
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 174/383 (45%), Gaps = 60/383 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 1207 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1264
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1265 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1324
Query: 560 LPTHEIVARG-----VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
P H R V+ ++ + + P + + + D +SDLP + N S E
Sbjct: 1325 EPLHVFAPRACQLSVVVDDKKFVSNITRLGSAPF---RTITVRDTMSDLPEIRNGASAPE 1381
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
Y ++ FQ+ +R S Q R + D P R+ IP
Sbjct: 1382 IAYNGEPQSWFQRQLR--------GSHYQPTVRDHICKDMSPLVA-----ARMRHIPLAP 1428
Query: 675 GANFRDLPGVLVGPDN-----KVRWDPSMERVMLKSGKPL-------------------- 709
G+++RDLP + V + K+R+ ++ S L
Sbjct: 1429 GSDWRDLPNIEVPLSDGTVAKKLRYSYQDKKNGCSSSGALRGVCSCAEGAGKACDTMARQ 1488
Query: 710 --------VPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLT 759
+P + H + +GRL WD +T VT +P + +LHP Q RV++
Sbjct: 1489 FNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVS 1546
Query: 760 IRENARLQGFPDCYQLFGPVKER 782
+RE AR QGFPD Y+LFG + +R
Sbjct: 1547 VRECARSQGFPDTYRLFGNILDR 1569
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P + V
Sbjct: 1130 IKLPKLRTLDVFSGCGGLSEGF----HQAGI-CETLWAIEMWEPAAQAFRLNNPGSTVFT 1184
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 1185 EDCNVLLKLV 1194
>gi|3818628|gb|AAC69603.1| DNA methyltransferase [Danio rerio]
Length = 700
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 183/397 (46%), Gaps = 60/397 (15%)
Query: 427 LKEFVTKGYRSNIL----PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L + V G ++N L P GDV+ +CGGPPCQG SG NRF + KN ++ +
Sbjct: 278 LLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSY 335
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ +Y +P++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R
Sbjct: 336 LSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRR 395
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARG----VIPNEFQEIIVAYANNQPCQLEKGVLLSD 598
R + A P +KLP+YP P H R V +E + + N + + + + D
Sbjct: 396 RAIILAAAPGEKLPRYPEPLHVFAPRACSLSVAVDEKKYVSNVTRGNG--GIYRTITVRD 453
Query: 599 AISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQ 658
+SDLP + N + E Y ++ FQ+ IR ++ +L DH
Sbjct: 454 TMSDLPEIRNGAAALEISYNGEPQSWFQRQIRGSQYQ-------------PILRDHICKD 500
Query: 659 VNNDDYERVCCIPKRKGANFRDLPGVLV-----GPDNKVRWDPSMER------------V 701
++ R+ IP G+++RDLP + V K+R+ S ++
Sbjct: 501 MSALVAARMRHIPLAPGSDWRDLPNIEVRLRDGTTTKKLRYTHSDKKNGRSGTGALRGVC 560
Query: 702 MLKSGKP--------------LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR 747
GK +P + H + +GRL WD +T VT +P +
Sbjct: 561 SCSEGKQCDPADRQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGK 618
Query: 748 I--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+LHP Q RV+++RE AR QGFPD Y+ FG V ++
Sbjct: 619 QGRVLHPEQHRVVSVRECARSQGFPDTYRFFGNVLDK 655
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 248 SSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKF 307
++ +G+ P+ P++ LD++SGCG +S G +G+ T WAI++ A ++ +
Sbjct: 210 TTGSGAQEPV-VPKLRTLDVFSGCGGLSEGF----HQAGIS-ETHWAIEMWDPAAQAFRL 263
Query: 308 NHPETKVRNEAADDFLSLL 326
N+P T V E + L L+
Sbjct: 264 NNPGTTVFTEDCNVLLKLV 282
>gi|297276085|ref|XP_001104704.2| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Macaca mulatta]
Length = 1280
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 178/390 (45%), Gaps = 59/390 (15%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 867 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 924
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 925 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 984
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 985 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1040
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R A +L DH ++
Sbjct: 1041 VRNGASALEISYNGEPQSWFQRQLR-------------GAQYQPILRDHICKDMSALVAA 1087
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMER-------------VMLKSGK 707
R+ IP G+++RDLP + V + K+R+ + +++GK
Sbjct: 1088 RMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGK 1147
Query: 708 PLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHP 752
P A +F H +GRL WD +T VT +P + +LHP
Sbjct: 1148 ACHPA-ARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHP 1206
Query: 753 SQDRVLTIRENARLQGFPDCYQLFGPVKER 782
Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 1207 EQHRVVSVRECARSQGFPDTYRLFGNILDK 1236
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE-SVDGEPYFKARWFYRAED 160
+ +Y + +D +GD V ++ + Y+AR+ L+E S++G+ F A WF D
Sbjct: 408 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSINGQ-MFHAHWFCAGTD 466
Query: 161 TVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
TV L D +FL D +D L+ I SK K+
Sbjct: 467 TV---LGATSDPLELFLVDECEDMQLSYIHSKVKV 498
>gi|426387162|ref|XP_004060043.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Gorilla gorilla
gorilla]
Length = 1790
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 179/390 (45%), Gaps = 59/390 (15%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 1377 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 1434
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 1435 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1494
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 1495 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1550
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R ++ + L DH ++
Sbjct: 1551 VRNGASALEISYNGEPQSWFQRQLRGAQYQPI-------------LRDHICKDMSALVAA 1597
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMER-------------VMLKSGK 707
R+ IP G+++RDLP + V + K+R+ + +++GK
Sbjct: 1598 RMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGK 1657
Query: 708 PLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHP 752
P A +F H +GRL WD +T VT +P + +LHP
Sbjct: 1658 ACDP-AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHP 1716
Query: 753 SQDRVLTIRENARLQGFPDCYQLFGPVKER 782
Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 1717 EQHRVVSVRECARSQGFPDTYRLFGNILDK 1746
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 918 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 977
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK K+
Sbjct: 978 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 1008
>gi|6684525|gb|AAF23609.1| DNA (cytosine-5)-methyltransferase [Homo sapiens]
Length = 1280
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 178/390 (45%), Gaps = 59/390 (15%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 867 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 924
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 925 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 984
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 985 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1040
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R A +L DH ++
Sbjct: 1041 VRNGASALEISYNGEPQSWFQRQLR-------------GAQYQPILRDHICKDMSALVAA 1087
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMER-------------VMLKSGK 707
R+ IP G+++RDLP + V + K+R+ + +++GK
Sbjct: 1088 RMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGK 1147
Query: 708 PLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHP 752
P A +F H +GRL WD +T VT +P + +LHP
Sbjct: 1148 ACDPA-ARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHP 1206
Query: 753 SQDRVLTIRENARLQGFPDCYQLFGPVKER 782
Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 1207 EQHRVVSVRECARSQGFPDTYRLFGNILDK 1236
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 408 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 467
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK K+
Sbjct: 468 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 498
>gi|431918990|gb|ELK17857.1| DNA (cytosine-5)-methyltransferase 1 [Pteropus alecto]
Length = 1535
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 174/381 (45%), Gaps = 72/381 (18%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P+Y L
Sbjct: 1149 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1206
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P +KL
Sbjct: 1207 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKL 1266
Query: 556 PQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P +P P H +++ G F+ I V D +SDLP + N S E
Sbjct: 1267 PLFPEPLH-VLSSG----PFRTITV----------------RDTMSDLPEIRNGASALEI 1305
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
Y ++ FQ+ +R ++ + L DH ++ R+ IP G
Sbjct: 1306 SYNGEPQSWFQRQLRGSQYQPI-------------LRDHICKDMSALVAARMRHIPLAPG 1352
Query: 676 ANFRDLPGVLVGPDN-----KVRWDPSMERVMLKSGKPL--------------------- 709
+++RDLP + V + K+R+ ++ S L
Sbjct: 1353 SDWRDLPNIEVRLSDGTMARKLRYTYHDKKNGCSSTGALRGVCSCVEASKACDSTARQFN 1412
Query: 710 ------VPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIR 761
+P + H + +GRL WD +T VT +P + +LHP Q RV+++R
Sbjct: 1413 TLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVR 1470
Query: 762 ENARLQGFPDCYQLFGPVKER 782
E AR QGFPD Y+LFG + ++
Sbjct: 1471 ECARSQGFPDTYRLFGNILDK 1491
>gi|343197726|pdb|3SWR|A Chain A, Structure Of Human Dnmt1 (601-1600) In Complex With
Sinefungin
Length = 1002
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 178/390 (45%), Gaps = 59/390 (15%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 605 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 662
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 663 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 722
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 723 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 778
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R A +L DH ++
Sbjct: 779 VRNGASALEISYNGEPQSWFQRQLR-------------GAQYQPILRDHICKDMSALVAA 825
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMER-------------VMLKSGK 707
R+ IP G+++RDLP + V + K+R+ + +++GK
Sbjct: 826 RMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGK 885
Query: 708 PLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHP 752
P A +F H +GRL WD +T VT +P + +LHP
Sbjct: 886 ACDPA-ARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHP 944
Query: 753 SQDRVLTIRENARLQGFPDCYQLFGPVKER 782
Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 945 EQHRVVSVRECARSQGFPDTYRLFGNILDK 974
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 146 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 205
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK K+
Sbjct: 206 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 236
>gi|62088406|dbj|BAD92650.1| DNA (cytosine-5-)-methyltransferase 1 variant [Homo sapiens]
Length = 1606
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 176/396 (44%), Gaps = 74/396 (18%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 1190 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 1247
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 1248 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1307
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 1308 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1363
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R ++ + L DH ++
Sbjct: 1364 VRNGASALEISYNGEPQSWFQRQLRGAQYQPI-------------LRDHICKDMSALVAA 1410
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDNKVRW-DPSMERVML--------------------- 703
R+ IP G+++RDLP + +VR D +M R +
Sbjct: 1411 RMRHIPLAPGSDWRDLPNI------EVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCS 1464
Query: 704 -----KSGKPLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPH 745
SGK P A +F H +GRL WD +T VT +P
Sbjct: 1465 CVEGGSSGKACDP-AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPM 1523
Query: 746 NRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
+ +LHP Q RV+++RE AR QGFPD Y+LFG +
Sbjct: 1524 GKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNI 1559
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 731 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 790
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK K+
Sbjct: 791 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 821
>gi|354475153|ref|XP_003499794.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Cricetulus griseus]
Length = 1621
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 170/380 (44%), Gaps = 56/380 (14%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 1216 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSTFKNSLVVSFLSYCDYYRPRFFLLENV 1273
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1274 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1333
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
P H R V +F I + + + + D +SDLP + N S
Sbjct: 1334 EPLHVFAPRACQLSVVVDDKKFVSNITRLTSGP----YRTITVRDTMSDLPEIQNGASAP 1389
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E Y ++ FQ+ +R S+ Q R + D P R+ IP+
Sbjct: 1390 EISYSGEPQSWFQRQLR--------DSAYQPILRDHICKDMSPLVA-----ARMKNIPRS 1436
Query: 674 KGANFRDLPGVLVGPDNKVR--------WDPSMERVMLKSGKPLVPDY--------AMKF 717
G+++RDLP + V + VR D R + + + Y +F
Sbjct: 1437 PGSDWRDLPNIEVLLSDGVRTKKLRYNFHDKKNGRSSTGAMRGVCSCYRGTRCSASGXQF 1496
Query: 718 -------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRE 762
H +GRL WD +T VT +P + +LHP Q RV+++RE
Sbjct: 1497 NTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRE 1556
Query: 763 NARLQGFPDCYQLFGPVKER 782
AR QGF D Y+ FG + +R
Sbjct: 1557 CARSQGFRDTYRFFGSILDR 1576
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 230 LNINNESNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKL 289
LN + +A +S + I P++ LD++SGCG +S G +G+
Sbjct: 1112 LNKGKGKGKGKGNAKCQVSEPKEPETAIKLPKLRTLDVFSGCGGLSEGF----HQAGIS- 1166
Query: 290 VTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLL 326
T WAI++ A ++ + N+P + V E + L L+
Sbjct: 1167 ETLWAIEMWDPAAQAFRLNNPSSTVFTEDCNVLLKLV 1203
>gi|410226628|gb|JAA10533.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
Length = 1635
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 176/396 (44%), Gaps = 74/396 (18%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 1219 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 1276
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 1277 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1336
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 1337 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1392
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R ++ + L DH ++
Sbjct: 1393 VRNGASALEISYNGEPQSWFQRQLRGAQYQPI-------------LRDHICKDMSALVAA 1439
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDNKVRW-DPSMERVML--------------------- 703
R+ IP G+++RDLP + +VR D +M R +
Sbjct: 1440 RMRHIPLAPGSDWRDLPNI------EVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCS 1493
Query: 704 -----KSGKPLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPH 745
SGK P A +F H +GRL WD +T VT +P
Sbjct: 1494 CVEGGASGKACDP-AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPM 1552
Query: 746 NRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
+ +LHP Q RV+++RE AR QGFPD Y+LFG +
Sbjct: 1553 GKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNI 1588
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 760 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 819
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK K+
Sbjct: 820 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 850
>gi|168277642|dbj|BAG10799.1| DNA (cytosine-5)-methyltransferase 1 [synthetic construct]
Length = 1498
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 178/399 (44%), Gaps = 74/399 (18%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 1082 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 1139
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 1140 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1199
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 1200 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1255
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R ++ + L DH ++
Sbjct: 1256 VRNGASALEISYNGEPQSWFQRQLRGAQYQPI-------------LRDHICKDMSALVAA 1302
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDNKVRW-DPSMERVML--------------------- 703
R+ IP G+++RDLP + +VR D +M R +
Sbjct: 1303 RMRHIPLAPGSDWRDLPNI------EVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCS 1356
Query: 704 -----KSGKPLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPH 745
SGK P A +F H +GRL WD +T VT +P
Sbjct: 1357 CVEGGSSGKACDP-AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPM 1415
Query: 746 NRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+ +LHP Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 1416 GKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDK 1454
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 623 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 682
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK K+
Sbjct: 683 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 713
>gi|315583650|pdb|3PTA|A Chain A, Crystal Structure Of Human Dnmt1(646-1600) In Complex With
Dna
Length = 956
Score = 162 bits (411), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 179/390 (45%), Gaps = 59/390 (15%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 559 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 616
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 617 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 676
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 677 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 732
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R ++ +L DH ++
Sbjct: 733 VRNGASALEISYNGEPQSWFQRQLRGAQYQ-------------PILRDHICKDMSALVAA 779
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMER-------------VMLKSGK 707
R+ IP G+++RDLP + V + K+R+ + +++GK
Sbjct: 780 RMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGK 839
Query: 708 PLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHP 752
P A +F H +GRL WD +T VT +P + +LHP
Sbjct: 840 ACDPA-ARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHP 898
Query: 753 SQDRVLTIRENARLQGFPDCYQLFGPVKER 782
Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 899 EQHRVVSVRECARSQGFPDTYRLFGNILDK 928
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 100 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 159
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK K+
Sbjct: 160 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 190
>gi|383416291|gb|AFH31359.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Macaca mulatta]
Length = 1619
Score = 162 bits (409), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 176/396 (44%), Gaps = 74/396 (18%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 1203 TPTSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 1260
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 1261 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1320
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 1321 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1376
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R ++ + L DH ++
Sbjct: 1377 VRNGASALEISYNGEPQSWFQRQLRGAQYQPI-------------LRDHICKDMSALVAA 1423
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDNKVRW-DPSMERVML--------------------- 703
R+ IP G+++RDLP + +VR D +M R +
Sbjct: 1424 RMRHIPLAPGSDWRDLPNI------EVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCS 1477
Query: 704 -----KSGKPLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPH 745
SGK P A +F H +GRL WD +T VT +P
Sbjct: 1478 CVEGGASGKACDP-AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPM 1536
Query: 746 NRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
+ +LHP Q RV+++RE AR QGFPD Y+LFG +
Sbjct: 1537 GKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNI 1572
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE-SVDGEPYFKARWFYRAED 160
+ +Y + +D +GD V ++ + Y+AR+ L+E S++G+ F A WF D
Sbjct: 744 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSINGQ-MFHAHWFCAGTD 802
Query: 161 TVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
TV L D +FL D +D L+ I SK K+
Sbjct: 803 TV---LGATSDPLELFLVDECEDMQLSYIHSKVKV 834
>gi|193783730|dbj|BAG53712.1| unnamed protein product [Homo sapiens]
Length = 540
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 180/396 (45%), Gaps = 71/396 (17%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 127 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 184
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 185 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 244
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 245 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 300
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R ++ + L DH ++
Sbjct: 301 VRNGASALEISYNGEPQSWFQRQLRGAQYQPI-------------LRDHICKDMSALVAA 347
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDNKVRW-DPSMERVM---------------------- 702
R+ IP G+++RDLP + +VR D +M R +
Sbjct: 348 RMRHIPLAPGSDWRDLPNI------EVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCS 401
Query: 703 -LKSGKPLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI 748
+++GK P A +F H +GRL WD +T VT +P +
Sbjct: 402 CVEAGKACDPA-ARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQ 460
Query: 749 --LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+LHP Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 461 GRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDK 496
>gi|355684539|gb|AER97432.1| DNA -methyltransferase 1 [Mustela putorius furo]
Length = 939
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 175/387 (45%), Gaps = 61/387 (15%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P+Y L
Sbjct: 531 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 588
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P ++L
Sbjct: 589 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEQL 648
Query: 556 PQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNN 609
P +P P H R V +F I ++ + + + D +SDLP V N
Sbjct: 649 PLFPEPLHVFAPRACQLXXVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEVRNG 704
Query: 610 ESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCC 669
S E Y ++ FQ+ +R A +L DH ++ R+
Sbjct: 705 ASSLEILYNGEPQSWFQRQLR-------------GAQYQPILRDHICKDMSALVAARMRH 751
Query: 670 IPKRKGANFRDLPGVLVGPDN-----KVRWDPSMERVMLKSGKPL--------------- 709
IP G+++RDLP + V + K+R+ ++ S L
Sbjct: 752 IPLAPGSDWRDLPNIEVRLSDGTMARKLRYTYHDKKNGCSSTGALRGVCSCVEAGKACDS 811
Query: 710 ------------VPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQD 755
+P + H + +GRL WD +T VT +P + +LHP Q
Sbjct: 812 AARQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQH 869
Query: 756 RVLTIRENARLQGFPDCYQLFGPVKER 782
RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 870 RVVSVRECARSQGFPDTYRLFGNILDK 896
>gi|31074161|gb|AAP20551.1| DNA cytosine-5 methyltransferase 1 [Bos taurus]
Length = 1611
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 174/382 (45%), Gaps = 58/382 (15%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
R L GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P+Y L
Sbjct: 1204 RGQKLLQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1261
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + + F + + + LV YQ G++ AG YG+ Q R R + A P + L
Sbjct: 1262 LENVRNFVSFKRSMVLKLTLRCLVRRGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEPL 1321
Query: 556 PQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNN 609
P +P P H R V +F I ++ + + + D +SDLP + N
Sbjct: 1322 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIRNG 1377
Query: 610 ESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCC 669
S E Y ++ FQ+ +R ++ + L DH ++ R+
Sbjct: 1378 ASALEISYNREPQSWFQRQLRGSQYQPI-------------LRDHICKDMSALVAARMRH 1424
Query: 670 IPKRKGANFRDLPGVLVGPDN-----KVRWDPSMERVMLKS------------GKPLVPD 712
IP G+++RDLP + V + K+R++ ++ S GKP P
Sbjct: 1425 IPLAPGSDWRDLPNIEVRLSDGTLARKLRYNYHDKKNGCSSSGALRGVCSCVEGKPCEP- 1483
Query: 713 YAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRV 757
A +F H +GRL WD +T VT +P + +LHP Q RV
Sbjct: 1484 AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRV 1543
Query: 758 LTIRENARLQGFPDCYQLFGPV 779
+++RE AR QGFPD Y+LFG +
Sbjct: 1544 VSVRECARSQGFPDTYRLFGNI 1565
Score = 39.3 bits (90), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 741 KSYYKKVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 800
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK ++
Sbjct: 801 V---LGATSDPLELFLVDECEDMQLSYIHSKVQV 831
>gi|1765919|emb|CAA32910.1| DNA methyltransferase 1 [Mus musculus]
Length = 1620
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 171/381 (44%), Gaps = 58/381 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 1214 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1271
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + + + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1272 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1331
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
P H R V +F I ++ + + + D +SDLP + N S
Sbjct: 1332 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1387
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E Y + FQ+ +R S Q R + D P R+ IP
Sbjct: 1388 EIPYNGEPLSWFQRQLR--------GSHYQPILRDHICKDMSPLVA-----ARMPHIPLF 1434
Query: 674 KGANFRDLPGVLVGPDNKVRWDP----------------SMERVM-LKSGKPLVPDYAMK 716
G+++RDLP + V + V D ++ V GK P+ + +
Sbjct: 1435 PGSDWRDLPNIQVRLGDGVIADKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPE-SRQ 1493
Query: 717 FE-------------HQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIR 761
F H +GRL WD +T VT +P + +LHP Q RV+++R
Sbjct: 1494 FSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVR 1553
Query: 762 ENARLQGFPDCYQLFGPVKER 782
E AR QGFPD Y+ FG + +R
Sbjct: 1554 ECARSQGFPDSYRFFGNILDR 1574
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 88 DRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDG 146
DR L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G
Sbjct: 731 DRISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNG 790
Query: 147 EPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
+ F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 791 QMMFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 836
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1137 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1191
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 1192 EDCNVLLKLV 1201
>gi|73853882|ref|NP_001027526.1| DNA (cytosine-5)-methyltransferase 1 [Sus scrofa]
gi|66363554|gb|AAY45793.1| DNA methyltransferase 1 [Sus scrofa]
Length = 1610
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 177/385 (45%), Gaps = 65/385 (16%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P+Y L
Sbjct: 1203 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1260
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P ++L
Sbjct: 1261 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEQL 1320
Query: 556 PQYPLPTHEIVARGVIPNEFQEIIVA----YANNQPCQLEKG----VLLSDAISDLPLVT 607
P +P P P Q +V + +N +L G + + D +SDLP +
Sbjct: 1321 PLFPEPL-------FAPRACQLSVVVDDKKFVSNI-TRLSSGPFRTITVRDTMSDLPEIR 1372
Query: 608 NNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERV 667
N S + Y ++ FQ+ +R ++ + L DH ++ R+
Sbjct: 1373 NGASAQDISYNGEPQSWFQRQLRGSQYQPI-------------LRDHICKDMSALVAARM 1419
Query: 668 CCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMERVMLKS-------------GKPL 709
IP G+++RDLP + V + K+R++ ++ S GK
Sbjct: 1420 RHIPLAPGSDWRDLPNIEVRLSDGTLARKLRYNYHDKKNGCSSTGALRGVCSCVEVGKAC 1479
Query: 710 VPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQ 754
P A +F H +GRL WD +T VT +P + +LHP Q
Sbjct: 1480 DP-AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQ 1538
Query: 755 DRVLTIRENARLQGFPDCYQLFGPV 779
RV+++RE AR QGFPD Y+LFG +
Sbjct: 1539 HRVVSVRECARSQGFPDTYRLFGNI 1563
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Query: 88 DRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDG 146
DR + E + + +Y + +D +GD V ++ + Y+AR+ L+E
Sbjct: 725 DRISWIGEAVKTDGKKIYYKKVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSN 784
Query: 147 EPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
F A WF DTV L D +FL D +D L+ I SK K+
Sbjct: 785 GQMFHAHWFCAGIDTV---LGATSDPLELFLVDEGEDMQLSYIHSKVKV 830
>gi|2689716|gb|AAC40061.1| DNA (cytosine-5)-methyltransferase [Mus musculus]
Length = 1502
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 171/381 (44%), Gaps = 58/381 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 1096 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1153
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + + + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1154 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1213
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
P H R V +F I ++ + + + D +SDLP + N S
Sbjct: 1214 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1269
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E Y + FQ+ +R S Q R + D P R+ IP
Sbjct: 1270 EIPYNGEPLSWFQRQLR--------GSHYQPILRDHICKDMSPLVA-----ARMPHIPLF 1316
Query: 674 KGANFRDLPGVLVGPDNKVRWDP----------------SMERVM-LKSGKPLVPDYAMK 716
G+++RDLP + V + V D ++ V GK P+ + +
Sbjct: 1317 PGSDWRDLPNIQVRLGDGVIADKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPE-SRQ 1375
Query: 717 FE-------------HQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIR 761
F H +GRL WD +T VT +P + +LHP Q RV+++R
Sbjct: 1376 FSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVR 1435
Query: 762 ENARLQGFPDCYQLFGPVKER 782
E AR QGFPD Y+ FG + +R
Sbjct: 1436 ECARSQGFPDSYRFFGNILDR 1456
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 88 DRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDG 146
DR L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G
Sbjct: 613 DRISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNG 672
Query: 147 EPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
+ F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 673 QMMFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 718
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1019 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1073
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 1074 EDCNVLLKLV 1083
>gi|147791011|emb|CAN68025.1| hypothetical protein VITISV_014485 [Vitis vinifera]
Length = 188
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 77/134 (57%), Positives = 94/134 (70%), Gaps = 5/134 (3%)
Query: 649 SLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKP 708
S+LYDHRP+ +N D+Y R+C IP+RKGANFRDL GV+VG DN DP+M+ ++L SG P
Sbjct: 15 SILYDHRPYPLNEDNYLRICQIPRRKGANFRDLSGVIVGTDNVAVRDPTMKPILLPSGHP 74
Query: 709 LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQG 768
LVPD +E S +PF RLWWDE + TV+T N+ QDRVLTIRE ARLQG
Sbjct: 75 LVPDCVFSYEQGKSKRPFARLWWDETMPTVLTFPYLRNQ-----KQDRVLTIRECARLQG 129
Query: 769 FPDCYQLFGPVKER 782
FPD Y+ G VKER
Sbjct: 130 FPDYYRFRGTVKER 143
>gi|148693196|gb|EDL25143.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_e [Mus musculus]
Length = 1604
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 170/381 (44%), Gaps = 58/381 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 1198 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1255
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + + + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1256 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1315
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
P H R V +F I ++ + + + D +SDLP + N S
Sbjct: 1316 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1371
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E Y + FQ+ +R S Q R + D P R+ IP
Sbjct: 1372 EIPYNGEPLSWFQRQLR--------GSHYQPILRDHICKDMSPLVA-----ARMRHIPLF 1418
Query: 674 KGANFRDLPGVLVGPDNKV---RWDPSMERV--------------MLKSGKPLVPDYAMK 716
G+++RDLP + V + V + + V GK P+ + +
Sbjct: 1419 PGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPE-SRQ 1477
Query: 717 FE-------------HQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIR 761
F H +GRL WD +T VT +P + +LHP Q RV+++R
Sbjct: 1478 FSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVR 1537
Query: 762 ENARLQGFPDCYQLFGPVKER 782
E AR QGFPD Y+ FG + +R
Sbjct: 1538 ECARSQGFPDSYRFFGNILDR 1558
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 88 DRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDG 146
DR L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G
Sbjct: 716 DRISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNG 775
Query: 147 EPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
+ F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 776 QMMFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 821
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1121 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1175
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 1176 EDCNVLLKLV 1185
>gi|148693195|gb|EDL25142.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_d [Mus musculus]
Length = 1619
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 170/381 (44%), Gaps = 58/381 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 1213 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1270
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + + + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1271 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1330
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
P H R V +F I ++ + + + D +SDLP + N S
Sbjct: 1331 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1386
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E Y + FQ+ +R S Q R + D P R+ IP
Sbjct: 1387 EIPYNGEPLSWFQRQLR--------GSHYQPILRDHICKDMSPLVA-----ARMRHIPLF 1433
Query: 674 KGANFRDLPGVLVGPDNKV---RWDPSMERV--------------MLKSGKPLVPDYAMK 716
G+++RDLP + V + V + + V GK P+ + +
Sbjct: 1434 PGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPE-SRQ 1492
Query: 717 FE-------------HQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIR 761
F H +GRL WD +T VT +P + +LHP Q RV+++R
Sbjct: 1493 FSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVR 1552
Query: 762 ENARLQGFPDCYQLFGPVKER 782
E AR QGFPD Y+ FG + +R
Sbjct: 1553 ECARSQGFPDSYRFFGNILDR 1573
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 88 DRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDG 146
DR L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G
Sbjct: 731 DRISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNG 790
Query: 147 EPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
+ F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 791 QMMFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 836
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1136 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1190
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 1191 EDCNVLLKLV 1200
>gi|74151181|dbj|BAE27713.1| unnamed protein product [Mus musculus]
Length = 1619
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 170/381 (44%), Gaps = 58/381 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 1213 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1270
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + + + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1271 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1330
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
P H R V +F I ++ + + + D +SDLP + N S
Sbjct: 1331 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1386
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E Y + FQ+ +R S Q R + D P R+ IP
Sbjct: 1387 EIPYNGEPLSWFQRQLR--------GSHYQPILRDHICKDMSPLVA-----ARMRHIPLF 1433
Query: 674 KGANFRDLPGVLVGPDNKV---RWDPSMERV--------------MLKSGKPLVPDYAMK 716
G+++RDLP + V + V + + V GK P+ + +
Sbjct: 1434 PGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPE-SRQ 1492
Query: 717 FE-------------HQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIR 761
F H +GRL WD +T VT +P + +LHP Q RV+++R
Sbjct: 1493 FSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVR 1552
Query: 762 ENARLQGFPDCYQLFGPVKER 782
E AR QGFPD Y+ FG + +R
Sbjct: 1553 ECARSQGFPDSYRFFGNILDR 1573
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 88 DRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDG 146
DR L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G
Sbjct: 731 DRISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNG 790
Query: 147 EPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
+ F A WF DTV++ + D +FL ++ L+ I SK K+
Sbjct: 791 QMMFHAHWFCAGTDTVLRATS---DPLELFLVGECENMQLSYIHSKVKV 836
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1136 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1190
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 1191 EDCNVLLKLV 1200
>gi|313661497|ref|NP_001186361.1| DNA (cytosine-5)-methyltransferase 1 isoform 3 [Mus musculus]
Length = 1501
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 170/381 (44%), Gaps = 58/381 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 1095 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1152
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + + + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1153 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1212
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
P H R V +F I ++ + + + D +SDLP + N S
Sbjct: 1213 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1268
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E Y + FQ+ +R S Q R + D P R+ IP
Sbjct: 1269 EIPYNGEPLSWFQRQLR--------GSHYQPILRDHICKDMSPLVA-----ARMRHIPLF 1315
Query: 674 KGANFRDLPGVLVGPDNKV---RWDPSMERV--------------MLKSGKPLVPDYAMK 716
G+++RDLP + V + V + + V GK P+ + +
Sbjct: 1316 PGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPE-SRQ 1374
Query: 717 FE-------------HQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIR 761
F H +GRL WD +T VT +P + +LHP Q RV+++R
Sbjct: 1375 FSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVR 1434
Query: 762 ENARLQGFPDCYQLFGPVKER 782
E AR QGFPD Y+ FG + +R
Sbjct: 1435 ECARSQGFPDSYRFFGNILDR 1455
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 88 DRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDG 146
DR L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G
Sbjct: 613 DRISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNG 672
Query: 147 EPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
+ F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 673 QMMFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 718
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1018 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1072
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 1073 EDCNVLLKLV 1082
>gi|148693197|gb|EDL25144.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_f [Mus musculus]
Length = 1638
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 170/381 (44%), Gaps = 58/381 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 1232 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1289
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + + + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1290 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1349
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
P H R V +F I ++ + + + D +SDLP + N S
Sbjct: 1350 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1405
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E Y + FQ+ +R S Q R + D P R+ IP
Sbjct: 1406 EIPYNGEPLSWFQRQLR--------GSHYQPILRDHICKDMSPLVA-----ARMRHIPLF 1452
Query: 674 KGANFRDLPGVLVGPDNKV---RWDPSMERV--------------MLKSGKPLVPDYAMK 716
G+++RDLP + V + V + + V GK P+ + +
Sbjct: 1453 PGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPE-SRQ 1511
Query: 717 FE-------------HQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIR 761
F H +GRL WD +T VT +P + +LHP Q RV+++R
Sbjct: 1512 FSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVR 1571
Query: 762 ENARLQGFPDCYQLFGPVKER 782
E AR QGFPD Y+ FG + +R
Sbjct: 1572 ECARSQGFPDSYRFFGNILDR 1592
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 88 DRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDG 146
DR L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G
Sbjct: 750 DRISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNG 809
Query: 147 EPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
+ F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 810 QMMFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 855
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1155 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1209
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 1210 EDCNVLLKLV 1219
>gi|313661499|ref|NP_001186362.1| DNA (cytosine-5)-methyltransferase 1 isoform 4 [Mus musculus]
gi|7339827|gb|AAF60965.1| DNA methyltransferase [Mus musculus]
gi|9719249|gb|AAF97695.1| DNA (cytosine-5)-methyltransferase [Mus musculus]
gi|148693192|gb|EDL25139.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_a [Mus musculus]
gi|148693198|gb|EDL25145.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_a [Mus musculus]
Length = 1502
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 170/381 (44%), Gaps = 58/381 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 1096 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1153
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + + + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1154 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1213
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
P H R V +F I ++ + + + D +SDLP + N S
Sbjct: 1214 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1269
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E Y + FQ+ +R S Q R + D P R+ IP
Sbjct: 1270 EIPYNGEPLSWFQRQLR--------GSHYQPILRDHICKDMSPLVA-----ARMRHIPLF 1316
Query: 674 KGANFRDLPGVLVGPDNKV---RWDPSMERV--------------MLKSGKPLVPDYAMK 716
G+++RDLP + V + V + + V GK P+ + +
Sbjct: 1317 PGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPE-SRQ 1375
Query: 717 FE-------------HQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIR 761
F H +GRL WD +T VT +P + +LHP Q RV+++R
Sbjct: 1376 FSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVR 1435
Query: 762 ENARLQGFPDCYQLFGPVKER 782
E AR QGFPD Y+ FG + +R
Sbjct: 1436 ECARSQGFPDSYRFFGNILDR 1456
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 88 DRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDG 146
DR L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G
Sbjct: 614 DRISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNG 673
Query: 147 EPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
+ F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 674 QMMFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 719
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1019 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1073
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 1074 EDCNVLLKLV 1083
>gi|327180734|ref|NP_034196.5| DNA (cytosine-5)-methyltransferase 1 isoform 2 [Mus musculus]
Length = 1619
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 170/381 (44%), Gaps = 58/381 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 1213 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1270
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + + + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1271 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1330
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
P H R V +F I ++ + + + D +SDLP + N S
Sbjct: 1331 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1386
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E Y + FQ+ +R S Q R + D P R+ IP
Sbjct: 1387 EIPYNGEPLSWFQRQLR--------GSHYQPILRDHICKDMSPLVA-----ARMRHIPLF 1433
Query: 674 KGANFRDLPGVLVGPDNKV---RWDPSMERV--------------MLKSGKPLVPDYAMK 716
G+++RDLP + V + V + + V GK P+ + +
Sbjct: 1434 PGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPE-SRQ 1492
Query: 717 FE-------------HQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIR 761
F H +GRL WD +T VT +P + +LHP Q RV+++R
Sbjct: 1493 FSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVR 1552
Query: 762 ENARLQGFPDCYQLFGPVKER 782
E AR QGFPD Y+ FG + +R
Sbjct: 1553 ECARSQGFPDSYRFFGNILDR 1573
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 88 DRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDG 146
DR L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G
Sbjct: 731 DRISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNG 790
Query: 147 EPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
+ F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 791 QMMFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 836
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1136 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1190
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 1191 EDCNVLLKLV 1200
>gi|31419356|gb|AAH53047.1| Dnmt1 protein [Mus musculus]
Length = 1627
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 170/381 (44%), Gaps = 58/381 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 1221 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1278
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + + + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1279 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1338
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
P H R V +F I ++ + + + D +SDLP + N S
Sbjct: 1339 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1394
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E Y + FQ+ +R S Q R + D P R+ IP
Sbjct: 1395 EIPYNGEPLSWFQRQLR--------GSHYQPILRDHICKDMSPLVA-----ARMRHIPLF 1441
Query: 674 KGANFRDLPGVLVGPDNKV---RWDPSMERV--------------MLKSGKPLVPDYAMK 716
G+++RDLP + V + V + + V GK P+ + +
Sbjct: 1442 PGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPE-SRQ 1500
Query: 717 FE-------------HQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIR 761
F H +GRL WD +T VT +P + +LHP Q RV+++R
Sbjct: 1501 FSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVR 1560
Query: 762 ENARLQGFPDCYQLFGPVKER 782
E AR QGFPD Y+ FG + +R
Sbjct: 1561 ECARSQGFPDSYRFFGNILDR 1581
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 88 DRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDG 146
DR L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G
Sbjct: 739 DRISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNG 798
Query: 147 EPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
+ F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 799 QMMFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 844
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1144 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1198
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 1199 EDCNVLLKLV 1208
>gi|148693194|gb|EDL25141.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_c [Mus musculus]
Length = 1683
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/376 (31%), Positives = 172/376 (45%), Gaps = 48/376 (12%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 1277 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1334
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + + + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1335 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1394
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
P H R V +F I ++ + + + D +SDLP + N S
Sbjct: 1395 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1450
Query: 614 ERKYGTVARTEFQKYIR-------LRRH---DVVNLSSAQMASRP----SLLYDHRPFQV 659
E Y + FQ+ +R LR H D+ L +A+M P S D QV
Sbjct: 1451 EIPYNGEPLSWFQRQLRGSHYQPILRDHICKDMSPLVAARMRHIPLFPGSDWRDLPNIQV 1510
Query: 660 NNDDYERVCCIPKRKGANFRD----------LPGVLVGPDNKVRWDPSMERVMLKSGKP- 708
D I + F D L GV + K DP E + P
Sbjct: 1511 RLGD----GVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKA-CDP--ESRQFSTLIPW 1563
Query: 709 LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARL 766
+P + H + +GRL WD +T VT +P + +LHP Q RV+++RE AR
Sbjct: 1564 CLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARS 1621
Query: 767 QGFPDCYQLFGPVKER 782
QGFPD Y+ FG + +R
Sbjct: 1622 QGFPDSYRFFGNILDR 1637
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 88 DRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDG 146
DR L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G
Sbjct: 795 DRISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNG 854
Query: 147 EPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
+ F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 855 QMMFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 900
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1200 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1254
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 1255 EDCNVLLKLV 1264
>gi|148693193|gb|EDL25140.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_b [Mus musculus]
Length = 1645
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 170/381 (44%), Gaps = 58/381 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 1239 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1296
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + + + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1297 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1356
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
P H R V +F I ++ + + + D +SDLP + N S
Sbjct: 1357 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1412
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E Y + FQ+ +R S Q R + D P R+ IP
Sbjct: 1413 EIPYNGEPLSWFQRQLR--------GSHYQPILRDHICKDMSPLVA-----ARMRHIPLF 1459
Query: 674 KGANFRDLPGVLVGPDNKV---RWDPSMERV--------------MLKSGKPLVPDYAMK 716
G+++RDLP + V + V + + V GK P+ + +
Sbjct: 1460 PGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPE-SRQ 1518
Query: 717 FE-------------HQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIR 761
F H +GRL WD +T VT +P + +LHP Q RV+++R
Sbjct: 1519 FSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVR 1578
Query: 762 ENARLQGFPDCYQLFGPVKER 782
E AR QGFPD Y+ FG + +R
Sbjct: 1579 ECARSQGFPDSYRFFGNILDR 1599
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 88 DRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDG 146
DR L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G
Sbjct: 757 DRISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNG 816
Query: 147 EPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
+ F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 817 QMMFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 862
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1162 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1216
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 1217 EDCNVLLKLV 1226
>gi|327180732|ref|NP_001186360.2| DNA (cytosine-5)-methyltransferase 1 isoform 1 [Mus musculus]
gi|20141336|sp|P13864.5|DNMT1_MOUSE RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
Short=Met-1; AltName: Full=DNA methyltransferase MmuI;
Short=DNA MTase MmuI; Short=M.MmuI; AltName: Full=MCMT
gi|6625687|gb|AAF19352.1| DNA methyltransferase [Mus musculus]
gi|37574019|gb|AAH48148.2| DNA methyltransferase (cytosine-5) 1 [Mus musculus]
Length = 1620
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/376 (31%), Positives = 172/376 (45%), Gaps = 48/376 (12%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 1214 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1271
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + + + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1272 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1331
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
P H R V +F I ++ + + + D +SDLP + N S
Sbjct: 1332 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1387
Query: 614 ERKYGTVARTEFQKYIR-------LRRH---DVVNLSSAQMASRP----SLLYDHRPFQV 659
E Y + FQ+ +R LR H D+ L +A+M P S D QV
Sbjct: 1388 EIPYNGEPLSWFQRQLRGSHYQPILRDHICKDMSPLVAARMRHIPLFPGSDWRDLPNIQV 1447
Query: 660 NNDDYERVCCIPKRKGANFRD----------LPGVLVGPDNKVRWDPSMERVMLKSGKP- 708
D I + F D L GV + K DP E + P
Sbjct: 1448 RLGD----GVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKA-CDP--ESRQFSTLIPW 1500
Query: 709 LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARL 766
+P + H + +GRL WD +T VT +P + +LHP Q RV+++RE AR
Sbjct: 1501 CLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARS 1558
Query: 767 QGFPDCYQLFGPVKER 782
QGFPD Y+ FG + +R
Sbjct: 1559 QGFPDSYRFFGNILDR 1574
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 88 DRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDG 146
DR L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G
Sbjct: 732 DRISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNG 791
Query: 147 EPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
+ F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 792 QMMFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 837
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1137 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1191
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 1192 EDCNVLLKLV 1201
>gi|357490119|ref|XP_003615347.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355516682|gb|AES98305.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 192
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/133 (57%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Query: 650 LLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL 709
+L+D R +++N DDY+ C IPKRKGA FRDLP + + KV +P ++R L SG PL
Sbjct: 1 MLHDRRSYEMNFDDYQCACRIPKRKGACFRDLPCARMQ-NKKVELNPDVKREFLASGNPL 59
Query: 710 VPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGF 769
VP+YA+ F +S PF R+WWD+ V TVVTRA+PHN+ +LHP QDRVL+IR NARLQGF
Sbjct: 60 VPNYAITFVCGTSPLPFARIWWDKTVPTVVTRAEPHNQKILHPEQDRVLSIRGNARLQGF 119
Query: 770 PDCYQLFGPVKER 782
PD Y+L G KER
Sbjct: 120 PDFYKLCGSSKER 132
>gi|332138119|pdb|3AV4|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1
gi|332138120|pdb|3AV5|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1 With
Adohcy
gi|332138121|pdb|3AV6|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1 With
Adomet
Length = 1330
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 170/381 (44%), Gaps = 58/381 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 924 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 981
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + + + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 982 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1041
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
P H R V +F I ++ + + + D +SDLP + N S
Sbjct: 1042 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1097
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E Y + FQ+ +R S Q R + D P R+ IP
Sbjct: 1098 EIPYNGEPLSWFQRQLR--------GSHYQPILRDHICKDMSPLVA-----ARMRHIPLF 1144
Query: 674 KGANFRDLPGVLVGPDNKV---RWDPSMERV--------------MLKSGKPLVPDYAMK 716
G+++RDLP + V + V + + V GK P+ + +
Sbjct: 1145 PGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPE-SRQ 1203
Query: 717 FE-------------HQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIR 761
F H +GRL WD +T VT +P + +LHP Q RV+++R
Sbjct: 1204 FSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVR 1263
Query: 762 ENARLQGFPDCYQLFGPVKER 782
E AR QGFPD Y+ FG + +R
Sbjct: 1264 ECARSQGFPDSYRFFGNILDR 1284
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 88 DRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDG 146
DR L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G
Sbjct: 442 DRISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNG 501
Query: 147 EPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
+ F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 502 QMMFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 547
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 847 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 901
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 902 EDCNVLLKLV 911
>gi|20137608|sp|Q9Z330.2|DNMT1_RAT RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
AltName: Full=DNA MTase RnoIP; Short=M.RnoIP; AltName:
Full=DNA methyltransferase I; AltName: Full=MCMT
Length = 1622
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 170/382 (44%), Gaps = 60/382 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 1216 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1273
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1274 RNFVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1333
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
P H R V +F I ++ + + + D +SDLP + N S
Sbjct: 1334 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITMRDTMSDLPEIQNGASAP 1389
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E Y K+ R V+ +A + P+ P R+ IP
Sbjct: 1390 EISY---------KW----RATVLVPEAAARVALPAHPQGPYPQVHERAGGCRMRHIPLS 1436
Query: 674 KGANFRDLPGVLVG-----PDNKVRWDPSMERVMLKSGKPL------------------- 709
G+++RDLP + V NK+R+ + S L
Sbjct: 1437 PGSDWRDLPNIQVRLRDGVITNKLRYTFHDTKNGCSSTGALRGVCSCAEGKTCDPASRQF 1496
Query: 710 -------VPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTI 760
+P + H + +GRL WD +T VT +P + +LHP Q RV+++
Sbjct: 1497 NTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSV 1554
Query: 761 RENARLQGFPDCYQLFGPVKER 782
RE AR QGFPD Y+LFG + +R
Sbjct: 1555 RECARSQGFPDTYRLFGNILDR 1576
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG GL G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1139 IKLPKLRTLDVFSGCG----GLTEGFHQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFT 1193
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 1194 EDCNVLLKLV 1203
>gi|315583643|pdb|3PT6|A Chain A, Crystal Structure Of Mouse Dnmt1(650-1602) In Complex With
Dna
gi|315583644|pdb|3PT6|B Chain B, Crystal Structure Of Mouse Dnmt1(650-1602) In Complex With
Dna
Length = 954
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 170/381 (44%), Gaps = 58/381 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 566 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 623
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + + + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 624 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 683
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
P H R V +F I ++ + + + D +SDLP + N S
Sbjct: 684 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 739
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E Y + FQ+ +R S Q R + D P R+ IP
Sbjct: 740 EIPYNGEPLSWFQRQLR--------GSHYQPILRDHICKDMSPLVA-----ARMRHIPLF 786
Query: 674 KGANFRDLPGVLVGPDNKV---RWDPSMERV--------------MLKSGKPLVPDYAMK 716
G+++RDLP + V + V + + V GK P+ + +
Sbjct: 787 PGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPE-SRQ 845
Query: 717 FE-------------HQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIR 761
F H +GRL WD +T VT +P + +LHP Q RV+++R
Sbjct: 846 FSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVR 905
Query: 762 ENARLQGFPDCYQLFGPVKER 782
E AR QGFPD Y+ FG + +R
Sbjct: 906 ECARSQGFPDSYRFFGNILDR 926
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 88 DRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDG 146
DR L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G
Sbjct: 84 DRISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNG 143
Query: 147 EPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
+ F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 144 QMMFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 189
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 489 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 543
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 544 EDCNVLLKLV 553
>gi|315583649|pdb|3PT9|A Chain A, Crystal Structure Of Mouse Dnmt1(731-1602) In The Free
State
gi|377656587|pdb|4DA4|A Chain A, Structure Of Mouse Dnmt1 (731-1602) Bound To
Hemimethylated Cpg Dna
gi|377656588|pdb|4DA4|B Chain B, Structure Of Mouse Dnmt1 (731-1602) Bound To
Hemimethylated Cpg Dna
Length = 873
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 170/381 (44%), Gaps = 58/381 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 485 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 542
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + + + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 543 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 602
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
P H R V +F I ++ + + + D +SDLP + N S
Sbjct: 603 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 658
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E Y + FQ+ +R S Q R + D P R+ IP
Sbjct: 659 EIPYNGEPLSWFQRQLR--------GSHYQPILRDHICKDMSPLVA-----ARMRHIPLF 705
Query: 674 KGANFRDLPGVLVGPDNKV---RWDPSMERV--------------MLKSGKPLVPDYAMK 716
G+++RDLP + V + V + + V GK P+ + +
Sbjct: 706 PGSDWRDLPNIQVRLGDGVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKACDPE-SRQ 764
Query: 717 FE-------------HQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIR 761
F H +GRL WD +T VT +P + +LHP Q RV+++R
Sbjct: 765 FSTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVR 824
Query: 762 ENARLQGFPDCYQLFGPVKER 782
E AR QGFPD Y+ FG + +R
Sbjct: 825 ECARSQGFPDSYRFFGNILDR 845
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 88 DRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDG 146
DR L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G
Sbjct: 3 DRISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNG 62
Query: 147 EPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
+ F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 63 QMMFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 108
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 408 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 462
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 463 EDCNVLLKLV 472
>gi|440794374|gb|ELR15535.1| C5 cytosine-specific DNA methylase superfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 1562
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 184/391 (47%), Gaps = 52/391 (13%)
Query: 419 GLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQ 478
+ + +E K + +N LP G ++FI GPPCQG +G NRF P+A +D+ N
Sbjct: 1129 AIERHEEATKTGKKEAMEANQLPPKGAINFIYCGPPCQGFTGMNRF--PKA--DDVLNSL 1184
Query: 479 LLVFMDVIEYLKPKYVLMENVVDILKF------------SGGF---LARYAVGRLVSMDY 523
+ + +++ +P Y L+ENV ++ F SGG + ++ + L +M Y
Sbjct: 1185 IATTLSCVDFYRPTYFLLENVRGMVDFKLGGVQETKARMSGGIKLGVVKFILRALTAMGY 1244
Query: 524 QTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARG----VIPNEFQEII 579
Q R + AG YG+PQ R R F+WG LPQ+P PTH G ++PN +
Sbjct: 1245 QARFSLQQAGMYGVPQSRRRFFIWGVLRGHTLPQFPQPTHTFPKPGSLSMLLPNVGVRLE 1304
Query: 580 VAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYI--RLRRHDVV 637
A + P + + +S+AISDLP +E E+ + + + K+I +R +D
Sbjct: 1305 PVTARSAP---HRYISVSEAISDLPAFEYDEPEEPKDERSRSGPHKDKWIGSEVREYDAE 1361
Query: 638 NLSSAQMASRPSL----LYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVG---PDN 690
S Q A R LY+H + +R+C +PKR VG PDN
Sbjct: 1362 PESDFQKAMRRRTKDKKLYNHVTKTFTEMNVKRICNVPKRPA----------VGEPYPDN 1411
Query: 691 KVRWDPSMERVMLKSGKP--LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR- 747
+D R + S P L + +H+ +GRL + T +T P +
Sbjct: 1412 PPFYD---HRDLPPSLSPWCLSNPNSKAAKHRMWPGLYGRLDYQGYFQTALTEVCPMGKQ 1468
Query: 748 -ILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+LHP Q RV+T+RE+AR QGFPD ++ +
Sbjct: 1469 GKVLHPYQSRVITVREHARSQGFPDDFRFYA 1499
>gi|444525514|gb|ELV14061.1| DNA (cytosine-5)-methyltransferase 1 [Tupaia chinensis]
Length = 1472
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 172/383 (44%), Gaps = 52/383 (13%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 1012 TANARGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 1069
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 1070 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1129
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 1130 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1185
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
+ N S E Y ++ FQ+ +R ++ + L DH ++
Sbjct: 1186 IRNGASALEISYNGEPQSWFQRQLRGSQYQPI-------------LRDHICKDMSALVAA 1232
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMERVMLKSGKPL---------VP 711
R+ IP G+++RDLP + V + K+R+ + S L
Sbjct: 1233 RMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEGAA 1292
Query: 712 DYAMKFEHQ-SSTKPFG---RLWWDEIVNTVVTRA--------QPHNRILLHPSQDRVLT 759
A H+ T P+G W + + RA P R+ LHP Q RV++
Sbjct: 1293 RAASPCSHRDGGTGPWGLPAARTWGSLPRGLGHRALAESKHPLSPQGRV-LHPEQHRVVS 1351
Query: 760 IRENARLQGFPDCYQLFGPVKER 782
+RE AR QGFPD Y+LFG + ++
Sbjct: 1352 VRECARSQGFPDTYRLFGNILDK 1374
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 943 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTAVFT 997
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 998 EDCNVLLKLV 1007
Score = 39.3 bits (90), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 553 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 612
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK +
Sbjct: 613 V---LGATSDPLELFLVDECEDMQLSYIHSKVTV 643
>gi|304441893|gb|ADM34182.1| DNA methyltransferase 1 [Aplysia californica]
Length = 405
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 168/367 (45%), Gaps = 60/367 (16%)
Query: 455 CQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYA 514
CQG SG NRF + + + KN + ++ +Y +P++ L+ENV + + F + + A
Sbjct: 1 CQGFSGMNRFNSREYS--KFKNSLIASYLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLA 58
Query: 515 VGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARG----- 569
+ LV M YQ G++ AGSYG+ Q R R + A P +KLP YP P H R
Sbjct: 59 LRCLVRMGYQCTFGVLQAGSYGVAQTRRRAIILAAAPGEKLPVYPEPQHTFAPRAMQLSV 118
Query: 570 -VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKY 628
V +F I N + + + DA+SDLP + N +E Y A+T FQ+
Sbjct: 119 MVDDRKFNSNI----KNMTSTPYRTITVRDAMSDLPEIKNGAKAEEISYKGDAQTHFQRL 174
Query: 629 IRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLV-- 686
IR +H +L DH +++ R+ IP G+++RDLP + +
Sbjct: 175 IRGHQHQ-------------PILRDHVCKEMSPLVAARMTHIPLVPGSDWRDLPNLEIRL 221
Query: 687 ------------GPDNKVRWDPSMERVMLKSGK------PL-----------VPDYAMKF 717
PD + + +R + + PL +P +
Sbjct: 222 SDGSKAKKLLYTHPDKRNGKGSNGQRXXVXACATXRVCDPLDRQFXTLXPWCLPHTGNRH 281
Query: 718 EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQL 775
H + +GRL WD +T VT +P + +LHP Q RV+++RE AR QGFPD Y+
Sbjct: 282 NHWAGL--YGRLEWDGFFSTTVTNPEPMGKXGRVLHPEQHRVVSVRECARSQGFPDTYRF 339
Query: 776 FGPVKER 782
FG + ++
Sbjct: 340 FGNILDK 346
>gi|443724442|gb|ELU12454.1| hypothetical protein CAPTEDRAFT_222429 [Capitella teleta]
Length = 1007
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 168/377 (44%), Gaps = 61/377 (16%)
Query: 439 ILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMEN 498
+ PL G+VD I GPPCQG S N+F + +A KN ++ + +Y +PKY +MEN
Sbjct: 629 VYPLKGEVDLISAGPPCQGYSLLNKFTSSEAY--QFKNSLVVTALSFCDYYQPKYFVMEN 686
Query: 499 VVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQY 558
V GG L + + L+ + YQ R GI+ AGSYG+PQ R R L A LP +
Sbjct: 687 VSTFATHKGGNLLKLVIRCLLELGYQCRFGILQAGSYGVPQSRRRFILMAAAQGLLLPAF 746
Query: 559 PLPTHEIVARGVIPNEFQEIIVAYANNQPC--QLEKGVL----LSDAISDLPLVTNNESE 612
P P H P F ++ + +P +++ G L + DA DLP V N +
Sbjct: 747 PEPIH------AFPVAFCDVYIDKRKFKPGLERIKIGHLRPLQIRDAFDDLPDVAANSTT 800
Query: 613 DERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPK 672
H S +S S+++DH V+ + R IP+
Sbjct: 801 -------------------AVHIKPTAKSLPWSSDSSVVFDHCVRPVDALNAARFAHIPR 841
Query: 673 RKGANFRDLPGVLV----GPDNKVRWDP---SMERVMLKSGKPLVPDYAMKFEHQSST-- 723
+GA++RDLP + V G + P +E + K V K E Q +T
Sbjct: 842 VRGADWRDLPNISVPLSDGSQTNILKYPFKGQIEGCVRKGVCACVEGKKCKSERQKNTLI 901
Query: 724 ---------------KPFGRLWWDEIVNTVVTRAQP---HNRILLHPSQDRVLTIRENAR 765
+GRL T++T QP R+ LHPS+DR+ ++RE AR
Sbjct: 902 PWWLPHTAQSNNHWKGVYGRLDERGCFRTIITNPQPGVKQGRV-LHPSKDRIASVRECAR 960
Query: 766 LQGFPDCYQLFGPVKER 782
QGFPD Y G +++R
Sbjct: 961 GQGFPDDYIFVGTIEKR 977
>gi|159481068|ref|XP_001698604.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
gi|158282344|gb|EDP08097.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 2204
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 168/355 (47%), Gaps = 39/355 (10%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP PG V + GGPPCQG SG NRF ++N ++ + ++ +P+Y L+ENV
Sbjct: 1816 LPAPGAVGLMMGGPPCQGYSGMNRFNT--GMWSQVQNSMVMAYTSYCDFYRPRYFLLENV 1873
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + ++ G + R V L+ + YQ R G++ AG +G+ Q R R F+W A P + LP +P
Sbjct: 1874 RNFVAYNDGRVFRLVVRTLLELGYQVRFGVLNAGCFGVSQSRKRTFIWAALPGELLPDWP 1933
Query: 560 LPTHE-------IVARGVIPN-EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNES 611
H + RGV + +F A P + V + D I DLP V N +
Sbjct: 1934 AALHRFKQEQLGVRMRGVGGDGQFFHASGPPAAGAPLRT---VTVRDVIGDLPPVENGST 1990
Query: 612 EDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIP 671
D Y + FQ+ IR R + + + DH +N + ER CIP
Sbjct: 1991 TDPLPYTGQPVSAFQRAIRGRAAAGGGGGNGE-------VRDHVVKAMNALNLERCRCIP 2043
Query: 672 KRK-GANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLV----PDYAMKFEHQSSTKPF 726
K GA++R L + V D S E +G+ LV P+ A + H +
Sbjct: 2044 KGDPGADWRVLLKL-------VAEDRSRE---FFNGQALVPWCLPNSADR--HNGWRGLY 2091
Query: 727 GRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
RL D T T P ++ + HP QDR++++RE AR QGFPD ++ +G V
Sbjct: 2092 SRLDPDGHFPTATTDPNPMGKVGQVFHPDQDRIVSVRECARSQGFPDHFRFYGNV 2146
>gi|147801051|emb|CAN77847.1| hypothetical protein VITISV_020831 [Vitis vinifera]
Length = 320
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 98/165 (59%), Gaps = 35/165 (21%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
GD D ICGGPPCQG+SG+NR RN + +D +NRQ++VFMD++ +LKPKYVLMENVVDIL
Sbjct: 183 GDADVICGGPPCQGISGYNRHRNADSPFDDERNRQIIVFMDIVNFLKPKYVLMENVVDIL 242
Query: 504 KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
+F+ G + RYA+ RL +LPQ+ LPTH
Sbjct: 243 QFAKGSVGRYALSRL-----------------------------------RLPQFALPTH 267
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTN 608
+++ + P F+ IVAY Q LEK ++L DAI+DLP V +
Sbjct: 268 DVILKYGAPTAFERNIVAYDEGQSPDLEKALVLGDAIADLPPVIS 312
>gi|16755865|gb|AAL28120.1|AF433679_1 putative chromomethylase MTH2 [Triticum aestivum]
Length = 90
Score = 145 bits (366), Expect = 9e-32, Method: Composition-based stats.
Identities = 63/89 (70%), Positives = 74/89 (83%)
Query: 449 ICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGG 508
+CGGPPCQG+SG NRFRN LED +N+QL+VFMDV+ YL+PKYVLMENVVDILKF+ G
Sbjct: 2 VCGGPPCQGISGLNRFRNYNEPLEDDRNKQLVVFMDVVNYLRPKYVLMENVVDILKFADG 61
Query: 509 FLARYAVGRLVSMDYQTRLGIMAAGSYGL 537
FL RYA+ RLVSM Q RLG+M AG YG+
Sbjct: 62 FLGRYALSRLVSMRCQARLGLMVAGCYGV 90
>gi|179506952|gb|ACB86652.1| EagI methylase [Pantoea agglomerans]
Length = 401
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 152/339 (44%), Gaps = 45/339 (13%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
G++D + GGPPCQG S P L+D +N ++ V E LKPK +L+ENV I+
Sbjct: 73 GELDLLAGGPPCQGFS----INAPIRTLDDTRNHLFKDYLRVAEVLKPKAILIENVPGIV 128
Query: 504 KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
G + L M Y I+ AG YG+PQ R R K +P P +
Sbjct: 129 SLGKGTVVEQIYKELNRMGYSVAHKILFAGHYGVPQMRFRTIFIAIYGHGKSISFPEPEY 188
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVART 623
A +E+ QL + DAISDLP +T +E Y + ++
Sbjct: 189 NAKAVANFAGS-KELCFQVPPLFADQLIPHTTVWDAISDLPPITGGNGSNESVYLSQPKS 247
Query: 624 EFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPG 683
++QK +R P+++Y+H ++ + +R+ IP +G ++RD+P
Sbjct: 248 DYQKVLR--------------QDSPNIIYNHECAKLGKVNLDRLKHIP--QGGSWRDIP- 290
Query: 684 VLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQ 743
L+PD + TK +GRL D + +T++T+
Sbjct: 291 -----------------------FELLPDGLKRARRSDHTKRYGRLHPDGLCSTILTKCD 327
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
PH HP+QDRVL++RE AR+Q FPD Y G + ++
Sbjct: 328 PHWGSFFHPTQDRVLSVREAARIQSFPDSYVFKGNLTQQ 366
>gi|2906004|gb|AAC03766.1| C5-DNA-methyltransferase [Ascobolus immersus]
Length = 1356
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 174/389 (44%), Gaps = 83/389 (21%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP G+VDFI GGPPCQG SG NR++ DIKN + F+ +++ KP++VL+ENV
Sbjct: 866 LPKKGEVDFIYGGPPCQGFSGVNRYKKGN----DIKNSLVATFLSYVDHYKPRFVLLENV 921
Query: 500 VDIL------------KFSGGF---LARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRV 544
++ K+ GG + ++ L+SM+YQ R+G++ +G YG+PQ R RV
Sbjct: 922 KGLITTKLGNSKNAEGKWEGGISNGVVKFIYRTLISMNYQCRIGLVQSGEYGVPQSRPRV 981
Query: 545 FLWGARPFKKLPQYPLPTHEIVARGVIPNEFQ--EIIVAYANNQPCQLEKGVLLSDAISD 602
AR ++LP P P H A V+ +++ I + + + +A+SD
Sbjct: 982 IFLAARMGERLPDLPEPMH---AFEVLDSQYALPHIKRYHTTQNGVAPLPRITIGEAVSD 1038
Query: 603 LPLV----------------TNNESEDE--RKYGTVARTEFQKYI--------------R 630
LP + D+ K+ T F Y+ R
Sbjct: 1039 LPKFQYANPGVWPRHDPYSSAKAQPSDKTIEKFSVSKATSFVGYLLQPYHSRPQSEFQRR 1098
Query: 631 LRRHDVVNLSSAQMAS--RPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGP 688
LR V + A+ S L+ H N + +R+ C+P GA+ R LP
Sbjct: 1099 LRTKLVPSDEPAEKTSLLTTKLVTAHVTRLFNKETTQRIVCVPMWPGADHRSLP------ 1152
Query: 689 DNKVRWDPSMERVMLKSGKP--LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHN 746
K +P LV + +H+ FGRL ++ +T +T QP
Sbjct: 1153 ---------------KEMRPWCLVDPNSQAEKHRFWPGLFGRLGMEDFFSTALTDVQPCG 1197
Query: 747 R--ILLHPSQDRVLTIRENARLQGFPDCY 773
+ +LHP+Q RV T+RE AR QGFPD +
Sbjct: 1198 KQGKVLHPTQRRVYTVRELARAQGFPDWF 1226
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 265 LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLS 324
LD+++GCG GL +G LSG + T+W I+ P A +L N P+ +V N+ A+ LS
Sbjct: 787 LDIFAGCG----GLTLGLDLSGA-VDTKWDIEFAPSAANTLALNFPDAQVFNQCANVLLS 841
>gi|395518186|ref|XP_003763246.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like, partial
[Sarcophilus harrisii]
Length = 692
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 123/252 (48%), Gaps = 23/252 (9%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ ICGGPPCQG SG NRF KN + F+ +Y +PK+ L+ENV
Sbjct: 423 LPQKGDVEMICGGPPCQGFSGMNRFNT--LTYSKFKNSLIASFLSYCDYYRPKFFLLENV 480
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + + LV M YQ GI+ AG YG+ Q R R F+ A P +KLP +P
Sbjct: 481 RNFVSFKRSMVLKLTLRCLVQMGYQCTFGILQAGHYGIAQTRRRAFILAAAPGEKLPMFP 540
Query: 560 LPTHEIVAR-----GVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
P H R VI N+ V + P + + + D++SDLP + N S +E
Sbjct: 541 EPLHVFSTRSSLLSAVIDNKRFVSNVKRLTSAPF---RTITVYDSLSDLPTIKNGASLEE 597
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
Y +T FQ+ IR RH V L DH +N R+ IP
Sbjct: 598 ISYEGEPKTWFQRQIRGPRHQQV-------------LKDHICKTMNALVMARIKLIPLVP 644
Query: 675 GANFRDLPGVLV 686
G+++RDLP + V
Sbjct: 645 GSDWRDLPNIQV 656
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
+ P++ LD++SGCG +S G +G+ T WAI++ A ++ N+P+T V +
Sbjct: 346 VNVPKLRTLDVFSGCGGLSEGF----HQAGIS-ETMWAIEMWKPAGQAFLLNYPKTIVLS 400
Query: 317 EAADDFLSLL 326
E + L ++
Sbjct: 401 EDCNILLKMV 410
>gi|340728437|ref|XP_003402531.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like, partial [Bombus terrestris]
Length = 635
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 132/252 (52%), Gaps = 23/252 (9%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP G V+ +CGGPPCQG SG NRF + Q +L KN ++ ++ +Y +P + +MENV
Sbjct: 311 LPQKGQVELLCGGPPCQGFSGMNRFNSRQYSL--FKNSLVVSYLSYCDYYRPNFFIMENV 368
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + + LV M YQ GI+ AG+YG+PQ R R+ + A P + LPQYP
Sbjct: 369 RNFVTFERSMVLKLTLRCLVRMGYQCTFGILQAGNYGIPQTRRRIIILAAAPGQILPQYP 428
Query: 560 LPTHEIVARG-----VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
PTH R ++ N+ ++ + P + + + DA+ DLP + N +++E
Sbjct: 429 EPTHVFSKRTCRLSVLVDNKKYSTNCSWTESAPF---RTINVRDALFDLPEIKNGWNKEE 485
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
Y A + FQ+ IR +++ LL DH ++ R+ IP
Sbjct: 486 MSYTNDAISHFQRRIRGKQYQ-------------PLLRDHICKEMTPLVETRIAHIPVAS 532
Query: 675 GANFRDLPGVLV 686
G+++RDLP ++V
Sbjct: 533 GSDWRDLPNIVV 544
>gi|24416628|dbj|BAC22505.1| cytosine methyltransferase [Marchantia paleacea subsp. diptera]
Length = 284
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 151/319 (47%), Gaps = 47/319 (14%)
Query: 468 QAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRL 527
Q ++ +L F+ +Y +P+Y L+ENV + + F+ G R + L+ M YQ R
Sbjct: 1 QRVWSKVQCEMILAFLSYADYFRPRYFLLENVRNFVSFNKGQTFRLTMASLLEMGYQVRF 60
Query: 528 GIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVAR--GV-IPNEFQEIIVAYAN 584
G++ AG++G+ Q R R F+W A P + LP +P H + GV +P Q V A
Sbjct: 61 GVLQAGNFGVSQSRKRAFIWAAAPDESLPDWPEARHVSASSQLGVTLPGGGQYAAVRDAG 120
Query: 585 -NQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQ 643
P + + + D I+DLP V N + Y A + FQ +IR
Sbjct: 121 LGAPF---RAITVRDTIADLPPVANGADTLKTVYTQPAESWFQMHIR------------- 164
Query: 644 MASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVML 703
+ +L DH ++N + R IPKR GA+ RDLP E++ L
Sbjct: 165 --GKTDVLTDHISKEMNELNLIRCQRIPKRPGADCRDLPA---------------EKIKL 207
Query: 704 KSGKPL------VPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQD 755
+G+ + +P+ A + H FGRL WD T +T QP ++ HP Q+
Sbjct: 208 STGQLVDLIPWCLPNTAAR--HNQWKGLFGRLDWDGNFPTSITDPQPMGKVGMCFHPVQN 265
Query: 756 RVLTIRENARLQGFPDCYQ 774
R++T+RE AR QGFPD Y+
Sbjct: 266 RIVTVRECARSQGFPDSYK 284
>gi|270015149|gb|EFA11597.1| DNA methyltransferase 1 [Tribolium castaneum]
Length = 1882
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 176/384 (45%), Gaps = 67/384 (17%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP +V+ I GGPPCQG SG NRF + +L KN ++ + + +Y +P ++ENV
Sbjct: 819 LPPKSEVEMIVGGPPCQGFSGMNRFNEGEYSL--FKNSLVVSLLSLCDYYRPLIFVLENV 876
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + + GG + + + LV++ YQ R+ I+ AG +G+PQ R R L + P +LP+ P
Sbjct: 877 RNFMLYKGGLILKLTLQCLVAIGYQVRISIVEAGEFGVPQARRRFILIASAPGYQLPRIP 936
Query: 560 LPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLS--DAISDLPLVTNNESEDERKY 617
P H + RG + + + + N Q +L DAI+DLP + ++++ + Y
Sbjct: 937 EPQHVFLQRGSRLDIYVDGVKYTNGNFWTQSAPYRMLHVRDAIADLPAIEHDDNRPQMPY 996
Query: 618 ----GTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
GT + FQ+ +R + + L DH + R+ IP +
Sbjct: 997 DDDEGT---SHFQRKMRGNQEE---------------LLDHICKPIAPIVQTRIKLIPPK 1038
Query: 674 KGANFRDLPGVLVG-PDNKVRWDPSMERVM--------LKSGKPLVPDYAMKFE------ 718
GA++R+LP V V PD +M V+ K G+P A E
Sbjct: 1039 GGADWRNLPNVRVQLPDG------TMTEVLQYRYRTKKQKDGEPNRGVCACSVEKACDPN 1092
Query: 719 ------------------HQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVL 758
H + +GRL W T T +P + ++HP Q+R++
Sbjct: 1093 DRQSNTLIPWCLPHTADRHNNWAGVYGRLDWSGYFATTTTNPEPMGKQGRVIHPDQNRLI 1152
Query: 759 TIRENARLQGFPDCYQLFGPVKER 782
++RE AR QGFPD + FG V +
Sbjct: 1153 SVRECARSQGFPDKTKFFGSVTSK 1176
>gi|336379961|gb|EGO21115.1| hypothetical protein SERLADRAFT_417509 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1251
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 162/390 (41%), Gaps = 86/390 (22%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
+P PGDVDFI GGPPCQ SG N ++ DI++ + + +E+ +P Y L+ENV
Sbjct: 841 MPKPGDVDFIYGGPPCQSFSGINHWKKAN----DIRSTLICNMLSYVEFYRPSYFLLENV 896
Query: 500 VDILKF--SGGFLARYAVG------------RLVSMDYQTRLGIMAAGSYGLPQFRLRVF 545
IL + G R V L ++ YQ R ++ AG YG PQ R RV
Sbjct: 897 TGILNYRLKGRMEGRSTVDGIEMGVVKFILRSLAALGYQIRFNVLQAGQYGAPQGRQRVI 956
Query: 546 LWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQP-----CQLEKGVLLSDAI 600
WGA+ LP+ P+PTH V+R + + + P C + V ++DAI
Sbjct: 957 FWGAKRGLLLPELPIPTHGFVSRNYKVSTGTRLPRMTRSKDPTDDHLCSPFRAVTINDAI 1016
Query: 601 SDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPS--------LLY 652
DLP + Y + +R + +K R H ++ + R + Y
Sbjct: 1017 GDLPGF--DWINPHLVYPSTSRDKTEKRTRETEHGILAFDAGYEDRRSQKYPGYSKPMSY 1074
Query: 653 DHRPF--------------------QVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKV 692
H+P + + ERV +P + A++ LP L
Sbjct: 1075 AHQPMTRYQKWIRGSQKKVKYQYTRRFGDGIIERVINVPLKPNADYHSLPKKL------- 1127
Query: 693 RWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPF----GRLWWDEIVNTVVTRAQPHNRI 748
+ F+ + + + F GRL + T +T P+ +
Sbjct: 1128 --------------------HMKMFDKKGAKERFRGLYGRLDGESQFKTALTTVAPNAKG 1167
Query: 749 --LLHPSQDRVLTIRENARLQGFPDCYQLF 776
LLHPSQ R++T+RE AR QGFPD Y+
Sbjct: 1168 GNLLHPSQKRIVTVRECARAQGFPDSYEFL 1197
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 265 LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFL 323
L+L+SG G + TGL +SG + TRWA++ +P A + + NH T V N+ + L
Sbjct: 761 LELFSGAGGLGTGL----DMSGF-VETRWAVEFSPSAAMTYQANHSHTTVYNQCTNVLL 814
>gi|2956677|emb|CAB09661.1| DNA-C5-methyltransferase [Ascobolus immersus]
Length = 1336
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 178/396 (44%), Gaps = 93/396 (23%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP G+VDFI GGPPCQG SG NR++ DIKN + F+ +++ KP++VL+ENV
Sbjct: 866 LPKKGEVDFIYGGPPCQGFSGVNRYKKGN----DIKNSLVATFLSYVDHYKPRFVLLENV 921
Query: 500 VDIL------------KFSGGF---LARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRV 544
++ K+ GG + ++ L+SM+YQ R+G++ +G YG+PQ R RV
Sbjct: 922 KGLITTKLGNSKNAEGKWEGGISNGVVKFIYRTLISMNYQCRIGLVQSGEYGVPQSRPRV 981
Query: 545 FLWGARPFKKLPQYPLPTHEIVARGVIPNEFQ--EIIVAYANNQPCQLEKGVLLSDAISD 602
AR ++LP P P H A V+ +++ I + + + +A+SD
Sbjct: 982 IFLAARMGERLPDLPEPMH---AFEVLDSQYALPHIKRYHTTQNGVAPLPRITIGEAVSD 1038
Query: 603 LPLV--------------TNNESEDERK--------------------YGTVARTEFQKY 628
LP ++ +++ K Y + ++EFQ+
Sbjct: 1039 LPKFQYANPGVWPRHDPYSSAKAQPSDKTIEKFSVSKATSFVGYLLQPYHSRPQSEFQRR 1098
Query: 629 IRLRRHDVVNLSSAQMASRPSLLYD-----HRPFQVNNDDYERVCCIPKRKGANFRDLPG 683
+R + + S A PSLL H N + +R+ C+P GA+ R LP
Sbjct: 1099 LRTKL-----VPSDDPAEEPSLLTTKLVTAHVTRLFNKETTQRIVCVPMWPGADHRSLP- 1152
Query: 684 VLVGPDNKVRWDPSMERVMLKSGKP--LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR 741
K +P LV + +H+ FGRL ++ +T +T
Sbjct: 1153 --------------------KEMRPWCLVDPNSQAEKHRFWPGLFGRLGMEDFFSTALTD 1192
Query: 742 AQPHNR--ILLHPSQDRVLTIRENARLQGFPDCYQL 775
QP + +LHP+ RV T+RE AR QGFPD +
Sbjct: 1193 VQPCGKQGKVLHPTPRRVYTVRELARAQGFPDWFAF 1228
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Query: 265 LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLS 324
LD+++GCG GL +G LSG + T+WAI+ P A +L N P+ +V N+ A+ LS
Sbjct: 787 LDIFAGCG----GLTLGLDLSGA-VDTKWAIEFAPSAANTLALNFPDAQVFNQCANVLLS 841
>gi|189233760|ref|XP_001814230.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase [Tribolium
castaneum]
Length = 1187
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 177/379 (46%), Gaps = 57/379 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP +V+ I GGPPCQG SG NRF + +L KN ++ + + +Y +P ++ENV
Sbjct: 801 LPPKSEVEMIVGGPPCQGFSGMNRFNEGEYSL--FKNSLVVSLLSLCDYYRPLIFVLENV 858
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + + GG + + + LV++ YQ R+ I+ AG +G+PQ R R L + P +LP+ P
Sbjct: 859 RNFMLYKGGLILKLTLQCLVAIGYQVRISIVEAGEFGVPQARRRFILIASAPGYQLPRIP 918
Query: 560 LPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLS--DAISDLPLVTNNESEDERKY 617
P H + RG + + + + N Q +L DAI+DLP + ++++ + Y
Sbjct: 919 EPQHVFLQRGSRLDIYVDGVKYTNGNFWTQSAPYRMLHVRDAIADLPAIEHDDNRPQMPY 978
Query: 618 ----GTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
GT + FQ+ +R + + L DH + R+ IP +
Sbjct: 979 DDDEGT---SHFQRKMRGNQEE---------------LLDHICKPIAPIVQTRIKLIPPK 1020
Query: 674 KGANFRDLPGVLV----------------------GPDNKVRWDPSMERVM---LKSGKP 708
GA++R+LP V V G N+ S+E+ +
Sbjct: 1021 GGADWRNLPNVRVQLPDGTMTEVLQYRYRTKKQKDGEPNRGVCACSVEKACDPNDRQSNT 1080
Query: 709 LVPDYAMKF---EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIREN 763
L+P + + H + +GRL W T T +P + ++HP Q+R++++RE
Sbjct: 1081 LIP-WCLPHTADRHNNWAGVYGRLDWSGYFATTTTNPEPMGKQGRVIHPDQNRLISVREC 1139
Query: 764 ARLQGFPDCYQLFGPVKER 782
AR QGFPD + FG V +
Sbjct: 1140 ARSQGFPDKTKFFGSVTSK 1158
>gi|68655480|emb|CAJ01710.1| putative cytosine-5 DNA methyltransferase [Hordeum vulgare subsp.
vulgare]
Length = 251
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 110/195 (56%), Gaps = 9/195 (4%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP+PG+V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +P++ L+ENV
Sbjct: 57 LPVPGEVEFINGGPPCQGFSGMNRFN--QSPWSKVQCEMILAFLSFAEYFRPRFFLLENV 114
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R AV L+ M YQ R GI+ AG++G+ Q R R F+W A P + LP +P
Sbjct: 115 RNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGTFGVAQSRKRAFIWAAAPGENLPDWP 174
Query: 560 LPTHEIVA---RGVIPN-EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H + + +P+ ++ + A P + + + D I DLP V N S+
Sbjct: 175 EPMHVFASPELKITLPDGKYYAAAKSTAAGAPF---RAITVRDTIGDLPKVENGASKLIL 231
Query: 616 KYGTVARTEFQKYIR 630
+YG + FQK IR
Sbjct: 232 EYGGEPTSWFQKKIR 246
>gi|409045793|gb|EKM55273.1| hypothetical protein PHACADRAFT_184086 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1237
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 171/397 (43%), Gaps = 96/397 (24%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
+P PG+VDFICGGPPCQ SG NR++ +DI++ + + +++ +PKY L+ENV
Sbjct: 818 MPKPGEVDFICGGPPCQSFSGANRWKKA----DDIRSTLICNTISYVDFYRPKYFLLENV 873
Query: 500 VDILKFSGGF-------------LARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFL 546
+L G + ++ LVS+ YQ ++ A YG PQ R RV
Sbjct: 874 TGLLSVPLGTEKQDQMTDGVAMGVVKFIFRALVSLGYQVHCKVLQAAQYGTPQSRERVIF 933
Query: 547 WGARPFKKLPQYPLPTHEIVARGV----IPNE---FQEIIVA---------YANNQP-CQ 589
W AR LP +P PTH A+GV +P + + VA YA P C
Sbjct: 934 WAARRDVPLPDFPYPTHHF-AKGVRSFNLPTGEVLHRPVRVAPHESAKRSEYAQYAPLC- 991
Query: 590 LEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIR--LRRHDVVN--------- 638
+ + DAI DL + D G + + + + +R V N
Sbjct: 992 ---AITVEDAIGDL------QKFDWLPSGPLTDEDIHRLAQGIVRFEAVTNREARFPYAG 1042
Query: 639 ------------LSSAQMASRPSLLYD-----HRPFQVNNDDYERVCCIPKRKGANFRDL 681
L+ QM +R L D H + + +RV +P R GAN +DL
Sbjct: 1043 YCGKGTAFLHPPLNRYQMQAREGLDVDDNVVYHYTQKFSAKIVDRVLHVPLRAGANHQDL 1102
Query: 682 PGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR 741
P + + L P+ K E++ K R D T++T
Sbjct: 1103 PP------------------QYRDKRKLQPNGKSKKEYERHYKRIDR---DSHFMTMLTT 1141
Query: 742 AQPH--NRILLHPSQDRVLTIRENARLQGFPDCYQLF 776
+P N I+LHP+Q RVLTIRE AR QGFPD ++
Sbjct: 1142 VKPSGTNAIVLHPTQKRVLTIRECARAQGFPDSHKFL 1178
>gi|338999490|ref|ZP_08638133.1| hypothetical protein GME_15605 [Halomonas sp. TD01]
gi|338763639|gb|EGP18628.1| hypothetical protein GME_15605 [Halomonas sp. TD01]
Length = 394
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 152/338 (44%), Gaps = 46/338 (13%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
++D + GGPPCQG S P L+D +N F+ + L PK +L+ENV I+
Sbjct: 75 ELDLVAGGPPCQGFS----VNAPIRDLDDERNHLFKDFLRIAFELMPKAILIENVPGIVS 130
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
G + + L S Y+ I+ AG YG+PQ R R + + +K +P P +
Sbjct: 131 LGKGTVVKQIYKELESRGYRVEHRILYAGHYGVPQLRFRTIIIAVKGREKEIYFPQPQYN 190
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
AR +E+ + +L+K + DA+SDLP + + Y + E
Sbjct: 191 STARANFAGA-KELCLKLLPLFASELKKQTTVWDALSDLPPIESGSVNTLMNYEAPPQGE 249
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+QKY+R V N S + VN ER+ IP +G ++RD+P
Sbjct: 250 YQKYLRKNSDKVTNHSCNGLGP------------VN---LERLKHIP--QGGSWRDIP-- 290
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQP 744
+D ++P + TK +GRL D + +T++T+ P
Sbjct: 291 ---------FD-------------MLPKGLQRARRSDHTKRYGRLSPDSLCSTILTKCDP 328
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
H HP QDRV+++RE AR+Q FPD Y G ++E+
Sbjct: 329 HWGSFFHPIQDRVISVREAARIQSFPDDYSFLGSLQEQ 366
>gi|449268905|gb|EMC79734.1| DNA (cytosine-5)-methyltransferase 1, partial [Columba livia]
Length = 1252
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 172/396 (43%), Gaps = 70/396 (17%)
Query: 427 LKEFVTKGYRSNIL----PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L + V G ++N L P GDV+ +CGGPPCQG SG NRF + KN ++ F
Sbjct: 850 LLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSF 907
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ +Y +P++ L+ENV + + F + + + LV M YQ G++ G+ L
Sbjct: 908 LSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQVGAATPRDAEL 967
Query: 543 RVFLWGARPFKKLP---QYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDA 599
G +PF P P P+ + P + + P + + + D
Sbjct: 968 -----GRKPFWAPPGSVAAPRPSGVTIGALTAPR-----VPPRTYSGPF---RTITVRDT 1014
Query: 600 ISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQV 659
+SDLP + N S E Y ++ FQ+ IR ++ +L DH +
Sbjct: 1015 MSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQ-------------PILRDHICKDM 1061
Query: 660 NNDDYERVCCIPKRKGANFRDLPGVLV-----GPDNKVRWDPSMER------------VM 702
+ R+ IP G+++RDLP + V K+R+ ++
Sbjct: 1062 SALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTTTRKLRYTHHEKKNGRSSSGALRGVCC 1121
Query: 703 LKSGKP--------------LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI 748
GKP +P + H + +GRL WD +T VT +P +
Sbjct: 1122 CAEGKPCDPADRQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQ 1179
Query: 749 --LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+LHP Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 1180 GRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDK 1215
>gi|393216765|gb|EJD02255.1| S-adenosyl-L-methionine-dependent methyltransferase [Fomitiporia
mediterranea MF3/22]
Length = 1109
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 173/409 (42%), Gaps = 119/409 (29%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP PG+VD I GGPPCQ +G NRF+ ++DI+ + + +E+ PKYVL+ENV
Sbjct: 692 LPRPGEVDLIMGGPPCQPYTGLNRFKR----IDDIRQTCIPTLLSYVEFYSPKYVLIENV 747
Query: 500 VDIL-----------KFSGGF---LARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVF 545
IL K GG + ++ V L S+ YQ L ++ + YG P R VF
Sbjct: 748 TSILHYRLKGRQEGRKIVGGVEGGMVKFIVRTLTSLGYQCSLKVLNSVDYGSPHQRKCVF 807
Query: 546 LWGARPFKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEK----GVL 595
W AR LP++P+PTH I RG I N +Q + A + + + E+ V
Sbjct: 808 FWAARRDLLLPKWPIPTH-IPRRGHNTVNRRITNNYQAPL-ASRDGRDVKHERAPFYAVT 865
Query: 596 LSDAISDL-----------------------------PLVTNNESEDER--------KYG 618
+ +AI DL + ++ED + +Y
Sbjct: 866 VKEAIDDLLPWDWENPGIFYPAGARRLRSLKPAFPAAAGIRRVDTEDAQVSGYGYPVRYA 925
Query: 619 TVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANF 678
+V RT +Q + R + + +Y H + + ER +P R ANF
Sbjct: 926 SVPRTLYQAFCRKGQGEFTR------------VYHHCTSLFSVKNVERTVNVPIRPCANF 973
Query: 679 RDLPGVL-VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWD--EIV 735
+DLP L VG NK GRLW D
Sbjct: 974 KDLPQPLRVGSGNKR----------------------------------GRLWKDLNGQF 999
Query: 736 NTVVTRAQP--HNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+++ T P N ++HP+ RVLT+RE AR QGFPD Y+ F VKER
Sbjct: 1000 HSLQTTIHPGARNAYIIHPTDRRVLTLRELARAQGFPDDYE-FCSVKER 1047
>gi|6273357|gb|AAF06333.1| DNA methyltransferase 1 [Xenopus laevis]
Length = 373
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 158/346 (45%), Gaps = 54/346 (15%)
Query: 474 IKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAG 533
KN ++ ++ +Y +PK+ L+ENV + + F + + + LV M YQ G++ AG
Sbjct: 1 FKNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQAG 60
Query: 534 SYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVAR----GVIPNEFQEIIVAYANNQPCQ 589
YG+ Q R R + A P +KLP +P P H R GVI +E + V+
Sbjct: 61 QYGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACSLGVIVDE--KKYVSNITRTSSS 118
Query: 590 LEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPS 649
L + + + D +SDLP + N S E Y ++ FQ+ IR ++
Sbjct: 119 LFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQ-------------P 165
Query: 650 LLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLV-----GPDNKVRWDPSMER---- 700
+L DH ++ R+ IP G+++RDLP + V K+R+ ++
Sbjct: 166 ILRDHICKDLSALVAARMRHIPLAPGSDWRDLPNMEVRLSDGTTSRKLRYSHHDKKNGRS 225
Query: 701 --------VMLKSGKP--------------LVPDYAMKFEHQSSTKPFGRLWWDEIVNTV 738
GKP +P + H + +GRL WD ++T
Sbjct: 226 SNGALRGVCSCAEGKPCDPADRQFSTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFLSTT 283
Query: 739 VTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
VT +P + +LHP Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 284 VTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDK 329
>gi|147801053|emb|CAN77849.1| hypothetical protein VITISV_020833 [Vitis vinifera]
Length = 631
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 71/83 (85%)
Query: 259 QPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEA 318
+PE++LLD+YSGCG MSTGLC+GA LSGV LVTRWA+DIN AC+SLK NHPET++RNE+
Sbjct: 527 KPELALLDIYSGCGGMSTGLCLGAKLSGVDLVTRWALDINKSACESLKLNHPETQIRNES 586
Query: 319 ADDFLSLLKEWAKLCQYFSIYDT 341
A+DFL LLKEW KLC+ + + D
Sbjct: 587 AEDFLDLLKEWDKLCKRYVVKDV 609
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 11/89 (12%)
Query: 144 VDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMD 203
+D E YF+ +WF+R EDTV+++ ++KR+F S++ +DN L+CIVSK +
Sbjct: 1 MDDEDYFRVQWFFRPEDTVMEEEGAFHEKKRLFYSNLVNDNLLDCIVSKVNL-------- 52
Query: 204 LEAKQKNIPPCDLYYDMKYTLPHLTFLNI 232
K +I PCD YYDMKY + + TF +
Sbjct: 53 ---KSNSILPCDFYYDMKYLIDYSTFCTM 78
>gi|110735992|dbj|BAE99970.1| chromomethylase [Arabidopsis thaliana]
Length = 150
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 79/102 (77%), Gaps = 2/102 (1%)
Query: 681 LPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVT 740
+PGVLV +NK +P R LKSGK +VP YA+ F S KPFGRLW DEIVNTVVT
Sbjct: 1 MPGVLVH-NNKAEINPRF-RAKLKSGKNVVPAYAISFIKGKSKKPFGRLWGDEIVNTVVT 58
Query: 741 RAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
RA+PHN+ ++HP Q+RVL++RENARLQGFPDCY+L G +KE+
Sbjct: 59 RAEPHNQCVIHPMQNRVLSVRENARLQGFPDCYKLCGTIKEK 100
>gi|23306233|emb|CAD43080.2| DNA methyltransferase 1d [Paracentrotus lividus]
Length = 1429
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 118/220 (53%), Gaps = 9/220 (4%)
Query: 423 CKEKLKEFVTKGYRSN----ILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQ 478
C E L+ V +G +++ LP GDV+ +CGGPPCQG SG NRF + + + KN
Sbjct: 1184 CNELLR-LVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYS--KFKNSL 1240
Query: 479 LLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLP 538
+ ++ +Y +P++ L+ENV + + + + + A+ L+ M YQ GI+ AG YG+P
Sbjct: 1241 ISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGVP 1300
Query: 539 QFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLE--KGVLL 596
Q R R + A P +KLP YP P H R + +NNQ C + + +
Sbjct: 1301 QTRRRAIILAAAPGEKLPFYPEPLHVFSTRACSLSVMIGEKKIESNNQWCLSAPYRTITV 1360
Query: 597 SDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDV 636
D++SDLP + N + E Y +++FQK IR +++ +
Sbjct: 1361 RDSMSDLPTINNGAQKLEISYDGEPQSDFQKKIRGKQYHL 1400
>gi|351700800|gb|EHB03719.1| DNA (cytosine-5)-methyltransferase 1 [Heterocephalus glaber]
Length = 1601
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 169/395 (42%), Gaps = 76/395 (19%)
Query: 427 LKEFVTKGYRSNIL----PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L + V G +N+L P GDV+ +CGGPPCQG SG NRF + KN ++ F
Sbjct: 1199 LLKLVMAGEVTNLLRQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSF 1256
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ +Y +P++ L+ENV + + F + + + LV M YQ G++ P+ +
Sbjct: 1257 LSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQVPVGVPPRQHV 1316
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISD 602
G+R + + GV P F+ + + + + + D +SD
Sbjct: 1317 LCCCLGSRAGQ-------------SGGVSPALFRPRLSSAPF-------RTITVRDTMSD 1356
Query: 603 LPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNND 662
LP + N S E Y ++ FQ+ +R S Q R + D P
Sbjct: 1357 LPEIRNGASAPEIAYNGEPQSWFQRQLR--------GSHYQPTLRDHICKDMSPLVA--- 1405
Query: 663 DYERVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMERVMLKSGKPL-------- 709
R+ IP G+++RDLP + V + K+R+ ++ S L
Sbjct: 1406 --ARMRHIPLAPGSDWRDLPNIEVHLTDGTLAKKLRYTHHDKKNSCSSSGNLRGVCSCAE 1463
Query: 710 --------------------VPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI- 748
+P + H + +GRL WD +T VT +P +
Sbjct: 1464 AAGRACDPTARQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQG 1521
Query: 749 -LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+LHP Q RV+++RE AR QGFPD Y+LFG + +R
Sbjct: 1522 RVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDR 1556
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 18/156 (11%)
Query: 83 LKRYPDRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELF 141
+K+ +R + E + + +Y Q +DG +GD V ++ + Y+AR+ L+
Sbjct: 727 MKQNKNRISWVGEAIKTDGKKSYYQQVCMDGETLEVGDCVSVIPDDPSKPLYLARVTALW 786
Query: 142 ESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIA----- 196
E F A WF DTV L D + +FL D +D L+ I SK +
Sbjct: 787 EDSSNGQMFHAHWFCAGSDTV---LGATSDPRELFLVDECEDMQLSYIHSKVNVIYKPPS 843
Query: 197 ---EVATNMDLEAKQKNIPP------CDLYYDMKYT 223
+ MD EA IP L+YD Y
Sbjct: 844 ENWAMEGGMDPEATLPGIPKDGKTYFYQLWYDQDYA 879
>gi|343172220|gb|AEL98814.1| DNA (cytosine-5)-methyltransferase, partial [Silene latifolia]
Length = 264
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 80/126 (63%), Gaps = 2/126 (1%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LP PG VDFI GGPPCQG SG NRF ++A ++ +L F+ +YL+PKY L+E
Sbjct: 114 NKLPRPGQVDFINGGPPCQGFSGMNRFN--KSAWSKVQCEMILAFLSFADYLRPKYFLLE 171
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ G R A+ L+ M YQ R GI+ AG++G+ Q R R F+W A P + LP
Sbjct: 172 NVRNFVSFNKGQTFRLAIASLLEMGYQVRFGILDAGAFGVSQSRKRAFIWAASPEETLPD 231
Query: 558 YPLPTH 563
+P P H
Sbjct: 232 WPEPMH 237
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Query: 261 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
+++ LD+++GCG +S GL SGV T+WAI+ A ++ NHPE +
Sbjct: 25 QLATLDIFAGCGGLSEGL----ERSGVS-QTKWAIEYEEPAGEAFNLNHPEASL 73
>gi|60544836|gb|AAX22756.1| DMT1 [Arabidopsis thaliana]
Length = 1431
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 100/179 (55%), Gaps = 7/179 (3%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
+ + LPLPG VDFI GGPPCQG SG NRF Q++ ++ +L F+ +Y +P+Y L
Sbjct: 1147 QKSTLPLPGQVDFINGGPPCQGFSGMNRFN--QSSWSKVQCEMILAFLSFADYFRPRYFL 1204
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + F+ G + + L+ M YQ R GI+ AG+YG+ Q R R F+W A P + L
Sbjct: 1205 LENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAAAPEEVL 1264
Query: 556 PQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLE---KGVLLSDAISDLPLVTNNES 611
P++P P H + + Q + YA + L + + + D I DLP V N +S
Sbjct: 1265 PEWPEPMHVFGVPKLKISLSQGL--HYAAVRSTALGAPFRPITVRDTIGDLPSVENGDS 1321
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 15/120 (12%)
Query: 675 GANFR---------DLPGVLVGPDNKVRWDPSMERVMLKSGKPL-VPDYAMKFEHQSSTK 724
GA FR DLP V G D++ + ++ ++ P +P+ A + H
Sbjct: 1298 GAPFRPITVRDTIGDLPSVENG-DSRTNKEVTLSDGRVEEMIPFCLPNTAER--HNGWKG 1354
Query: 725 PFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+GRL W T VT QP ++ HP Q R+LT+RE AR QGFPD Y+ G + +
Sbjct: 1355 LYGRLDWQGNFPTSVTDPQPMGKVGMCFHPEQHRILTVRECARSQGFPDSYEFAGNINHK 1414
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 25/180 (13%)
Query: 151 KARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAK--- 207
K R FYR ED V + A D + ++ S P + K ++ + ++M L +
Sbjct: 938 KVRRFYRPED-VSAEKAYASDIQELYFSQDTVVLPPGALEGKCEVRK-KSDMPLSREYPI 995
Query: 208 QKNIPPCDLYYDM-KYTLPHL------TFLNINNES---NRRDSDASSTISSETGSNSPI 257
+I CDL++D K +L L F I +++ ++ S I SE P+
Sbjct: 996 SDHIFFCDLFFDTSKGSLKQLPANMKPKFSTIKDDTLLRKKKGKGVESEIESEI--VKPV 1053
Query: 258 GQPE---MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
P+ ++ LD+++GCG +S GL A +S K WAI+ A ++ K NHPE+ V
Sbjct: 1054 EPPKEIRLATLDIFAGCGGLSHGL-KKAGVSDAK----WAIEYEEPAGQAFKQNHPESTV 1108
>gi|12229856|sp|P94147.1|MTA1_RUEGE RecName: Full=Modification methylase AgeI; Short=M.AgeI; AltName:
Full=Cytosine-specific methyltransferase AgeI
gi|8037880|gb|AAF71525.1|AF247972_2 AgeI methylase [Thalassobius gelatinovorus]
gi|1695647|dbj|BAA11333.1| ageI metylase [Thalassobius gelatinovorus]
gi|1588637|prf||2209243A AgeI methylase
Length = 429
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 169/361 (46%), Gaps = 35/361 (9%)
Query: 433 KGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPK 492
K R ++ PG VD + GGPPCQG S + + R+ +D +N+ + + +E +PK
Sbjct: 58 KKIREDLGVAPGQVDVVMGGPPCQGFSTYGQRRD-----DDARNQLYVPYFGFVEEFRPK 112
Query: 493 YVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPF 552
L+ENVV +L SGG + V R ++ Y + + A YG+PQ R RVF++GA
Sbjct: 113 AFLIENVVGLLSMSGGAVLADMVARAEALGYAADVVTLDACEYGVPQHRRRVFIFGAADG 172
Query: 553 KKLPQYPLPTHEIVAR-GVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLP--LVTNN 609
+++ P P+H R GV+ N+ + + QP + + DAISDLP ++
Sbjct: 173 QRI-DPPQPSHVNGKRSGVVLNDQPSLFFDGPSIQPA-----LTVRDAISDLPDEVLVPR 226
Query: 610 ESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMAS----RPSLLYDHRPFQVNNDDYE 665
+++ +Y +TE+Q+ +R ++ + S+ +M R ++L+ P E
Sbjct: 227 DTQKPMEYPEPPKTEYQRLMRGNSTELTHHSAKRMLGIRRLRLAMLH---PGDYGTKIEE 283
Query: 666 RVC--------CIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKF 717
R+ GA RD + R + R +LK G P M+F
Sbjct: 284 RLADGGLNDELIDLMMGGAGMRDAAEC----RTQDREKEAALREVLKGGH-TTPAKVMEF 338
Query: 718 -EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLF 776
+ Q + RL WD +TVV +HP DR +++RE AR Q FPD Y+
Sbjct: 339 LDSQGFANKYRRLRWDAPSHTVVAHMARDCSDFVHPGIDRFVSVREAARFQSFPDTYRFP 398
Query: 777 G 777
G
Sbjct: 399 G 399
>gi|426281416|gb|AFY23862.1| DNA methyltransferase 1, partial [Schistocerca gregaria]
Length = 337
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 163/358 (45%), Gaps = 60/358 (16%)
Query: 463 RFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMD 522
RF + Q +L KN ++ ++ +Y +P+Y ++ENV + + F + + + L M
Sbjct: 1 RFNSRQYSL--FKNSLIVSYLSYCDYYRPRYFILENVRNFVSFKRSMVLKLTLRCLQKMG 58
Query: 523 YQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARG------VIPNEFQ 576
YQ GI+ AG+YG+PQ R R + A P + LP +P PTH R V N+F
Sbjct: 59 YQCTFGILQAGNYGVPQTRRRAXILAAAPGEVLPNFPEPTHXFSPRACQLSVVVDENKFT 118
Query: 577 EIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDV 636
+ ++ P + + + D++SDLP + N ++E YG T FQ+ +R ++
Sbjct: 119 S-NCKWVDSAP---RRTITVRDSMSDLPEIRNGHKKEEMSYGGEPLTHFQRLVRGNQYQ- 173
Query: 637 VNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLV----GPDNK- 691
+L DH ++ R+ IP G+++RDLP ++V G K
Sbjct: 174 ------------PILRDHICKEMAPIIEARIANIPTGVGSDWRDLPNIVVRLSDGSYTKK 221
Query: 692 ---VRWDPSMER---------VMLKSGKP--------------LVPDYAMKFEHQSSTKP 725
D R +GKP +P + H +
Sbjct: 222 LIYTHHDKKNGRSSTGALRGVCACATGKPCDPMDKQTNTLIPWCLPHTGNRXNHWAGL-- 279
Query: 726 FGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKE 781
+GRL WD +T VT +P + +LHP Q RV+++RE AR QGFPD Y+ FG + E
Sbjct: 280 YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQTRVVSVRECARSQGFPDTYRFFGSITE 337
>gi|348546033|ref|XP_003460483.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like, partial
[Oreochromis niloticus]
Length = 772
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 130/268 (48%), Gaps = 25/268 (9%)
Query: 427 LKEFVTKGYRSNIL----PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L + V G ++N L P GDV+ +CGGPPCQG SG NRF + KN ++ +
Sbjct: 503 LLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSY 560
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ +Y +PK+ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R
Sbjct: 561 LSYCDYYRPKFFLLENVRNFVSFKNSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRR 620
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARG----VIPNEFQEIIVAYANNQPCQLEKGVLLSD 598
R + A P +KLP+YP P H R V+ E + + N + + + + D
Sbjct: 621 RAIILAAAPGEKLPRYPEPLHVFAPRACSLSVVVGEKRYVSNVTRGNG--GIYRTITVRD 678
Query: 599 AISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQ 658
+SDLP + N + E Y ++ FQ+ IR ++ +L DH
Sbjct: 679 TMSDLPEIRNGAAALEISYNGEPQSWFQRQIRGTQYQ-------------PILRDHICKD 725
Query: 659 VNNDDYERVCCIPKRKGANFRDLPGVLV 686
++ R+ IP G+++RDLP + V
Sbjct: 726 MSALVEGRMRYIPLAPGSDWRDLPNIEV 753
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 105 HYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVI 163
+Y + S++ L +GD V +E+ ++ Y+ARI ++E +G+ F A WF R DTV+
Sbjct: 48 YYRKVSLNDELLEVGDCVSVSSEDPSIPLYLARITSMWEDNNGK-MFHAHWFLRGIDTVL 106
Query: 164 KDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
+ + D + + D +D LN + K +
Sbjct: 107 GETS---DPLELVIVDECEDMLLNYVQGKVNV 135
>gi|440637271|gb|ELR07190.1| hypothetical protein GMDG_02417 [Geomyces destructans 20631-21]
Length = 1233
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 163/386 (42%), Gaps = 102/386 (26%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
+P GD+DF+ GGPPCQ SG NR P+A IKN L F+ +++ +PKY L+ENV
Sbjct: 805 MPKRGDIDFLYGGPPCQDFSGCNRC--PKA--NSIKNSLLTTFLSFVDHYRPKYFLLENV 860
Query: 500 VDILK-------------FSGGFL---ARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLR 543
+L+ GG ++ + L S+ Y + ++ A +G PQ R R
Sbjct: 861 RGLLQHRLGSTQKKSGPGVQGGIQQGSVKFILRALTSLGYSAQFHMLQAAEHGAPQSRRR 920
Query: 544 VFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDL 603
VF WGA +KLP YP PTH N F + + A + P V + DAISDL
Sbjct: 921 VFFWGALLGRKLPLYPQPTHVCKGLSAPTNTF--TMGSTAPHNP------VTVGDAISDL 972
Query: 604 PL------VTNNESEDERK--------------------------YGTVARTEFQKYIR- 630
P V + + R+ YG + TEFQ+ +R
Sbjct: 973 PAFDWRIKVPGEDRQARRQRELGIPTVDVPLGGKAPVGDNCSLYAYGPI--TEFQREVRR 1030
Query: 631 -LRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPD 689
++ + V N + Q S+ L R+ IP R AN DLP
Sbjct: 1031 YVKGNIVKNHVTRQWGSQTML---------------RLARIPMRPQANHNDLP------- 1068
Query: 690 NKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQP--HNR 747
+ D + R S P+ + RL + E T +T P N
Sbjct: 1069 --LEHDMACLRNQRASKSNFYPNR------------YHRLDFKEQFQTCLTNVDPGGENG 1114
Query: 748 ILLHPSQDRVLTIRENARLQGFPDCY 773
+LHP+Q R+LT+RE AR QGF D +
Sbjct: 1115 KILHPTQRRILTVREFARAQGFLDTF 1140
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 71/175 (40%), Gaps = 11/175 (6%)
Query: 155 FYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNC-IVSKAKIAEVATNMDLEAK---QKN 210
F E I+D L R DV+D C +V +I +A DLE
Sbjct: 610 FKSGEKHAIRDSRRLYLTNRRKTIDVDDKLLGKCQVVHPGRINNLAKYKDLEDTFYVSGR 669
Query: 211 IPPCDLYYDMKYTLPHLTFLNINNESNRRDSDASSTISSETGSNSPIGQPEMSL--LDLY 268
P C + T +N E D + + E + + + L +D++
Sbjct: 670 EPDCSDGTATRRTFDLEDLEPLNTEDFHDSVDGNEMVGMEEKRHETFSKAGLKLRAMDVF 729
Query: 269 SGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFL 323
+GCG +S+GL G ++ T + I+ + A ++LK N P KV NE A+ L
Sbjct: 730 AGCGGLSSGLHEGGAVE-----TLYGIEWDIDASRTLKRNFPHMKVYNENANTLL 779
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 127 EEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPL 186
E A + ARIV +F + G+P RWF DT + + A K +FL D DD +
Sbjct: 381 ETAARVWFARIVNIFANKRGDPMAHVRWFSHGGDTFLDETA---GPKELFLLDRCDDIEM 437
Query: 187 NCIVSKAKIAEVATNM--DLEAKQKNIPPCDLY---YDMKYTLP 225
+ IV K + E T + E+ + P C Y YD + T P
Sbjct: 438 STIVGKVNV-ERCTQIGPSEESDRFKKPNCYFYRFFYDDEETTP 480
>gi|344240107|gb|EGV96210.1| DNA (cytosine-5)-methyltransferase 1 [Cricetulus griseus]
Length = 1494
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 123/260 (47%), Gaps = 25/260 (9%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 1207 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSTFKNSLVVSFLSYCDYYRPRFFLLENV 1264
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1265 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1324
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
P H R V +F I + + + + D +SDLP + N S
Sbjct: 1325 EPLHVFAPRACQLSVVVDDKKFVSNITRLTSGP----YRTITVRDTMSDLPEIQNGASAP 1380
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E Y ++ FQ+ +R S+ Q R + D P R+ IP+
Sbjct: 1381 EISYSGEPQSWFQRQLR--------DSAYQPILRDHICKDMSPLVA-----ARMKNIPRS 1427
Query: 674 KGANFRDLPGVLVGPDNKVR 693
G+++RDLP + V + VR
Sbjct: 1428 PGSDWRDLPNIEVLLSDGVR 1447
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 230 LNINNESNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKL 289
LN + +A +S + I P++ LD++SGCG +S G +G+
Sbjct: 1103 LNKGKGKGKGKGNAKCQVSEPKEPETAIKLPKLRTLDVFSGCGGLSEGF----HQAGIS- 1157
Query: 290 VTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLL 326
T WAI++ A ++ + N+P + V E + L L+
Sbjct: 1158 ETLWAIEMWDPAAQAFRLNNPSSTVFTEDCNVLLKLV 1194
>gi|343172218|gb|AEL98813.1| DNA (cytosine-5)-methyltransferase, partial [Silene latifolia]
Length = 264
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 79/126 (62%), Gaps = 2/126 (1%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LP PG VDFI GGPPCQG SG NRF ++A ++ +L F+ +Y +PKY L+E
Sbjct: 114 NKLPRPGQVDFINGGPPCQGFSGMNRFN--KSAWSKVQCEMILAFLSFADYFRPKYFLLE 171
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ G R A+ L+ M YQ R GI+ AG++G+ Q R R F+W A P + LP
Sbjct: 172 NVRNFVSFNKGQTFRLAIASLLEMGYQVRFGILDAGAFGVSQSRKRAFIWAASPEETLPD 231
Query: 558 YPLPTH 563
+P P H
Sbjct: 232 WPEPMH 237
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Query: 261 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
+++ LD+++GCG +S GL SGV T+WAI+ A ++ NHPE V
Sbjct: 25 QLATLDIFAGCGGLSEGL----ERSGVSQ-TKWAIEYEEPAGEAFNLNHPEASV 73
>gi|432099546|gb|ELK28687.1| DNA (cytosine-5)-methyltransferase 1 [Myotis davidii]
Length = 1604
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 163/378 (43%), Gaps = 61/378 (16%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P+Y L+ENV
Sbjct: 1198 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFLLENV 1255
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAA-GSYGLPQ-FRLRVFLWGARPFKKLPQ 557
+ + F + + + LV M YQ G++ G P + F G+ +++
Sbjct: 1256 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQGDGCEAAPTPVKPAAFREGSASSQEM-- 1313
Query: 558 YPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKY 617
V R + Y C + + + D +SDLP + N S E Y
Sbjct: 1314 ------ATVIRWTAAVCVPRSAMLYCRLSSCPF-RTITVRDTMSDLPEIRNGASALEISY 1366
Query: 618 GTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGAN 677
++ FQ+ +R ++ + L DH ++ R+ +P G++
Sbjct: 1367 NGEPQSWFQRQLRGSQYQPI-------------LRDHICKDMSALVAARMRNVPLAPGSD 1413
Query: 678 FRDLPGVLVGPDN-----KVRWDPSMER------------VMLKSGKP------------ 708
+RDLP + V + K+R+ + SGK
Sbjct: 1414 WRDLPNIEVRLSDGTMTRKLRYTYHDRKNGCSSTGALRGVCSCASGKACDSTARQFNTLI 1473
Query: 709 --LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENA 764
+P + H + +GRL WD +T VT +P + +LHP Q RV+++RE A
Sbjct: 1474 PWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECA 1531
Query: 765 RLQGFPDCYQLFGPVKER 782
R QGFPD Y+LFG + ++
Sbjct: 1532 RSQGFPDTYRLFGNILDK 1549
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Query: 88 DRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDG 146
DR + E + + +Y + +D +GD V ++ + Y+AR+ L+E
Sbjct: 730 DRISWIGEAVKTDGKKTYYKKVCIDSETLKVGDCVSVIPDDSSKPLYLARVTALWEDSSQ 789
Query: 147 EPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
P F A WF DTV L D +FL D +D L+ I SK +
Sbjct: 790 GPMFHAHWFCAGTDTV---LGATSDPLELFLVDECEDMQLSYIHSKVTV 835
>gi|357477891|ref|XP_003609231.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355510286|gb|AES91428.1| Cytosine-specific methyltransferase [Medicago truncatula]
Length = 569
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 104/193 (53%), Gaps = 27/193 (13%)
Query: 114 CLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRK 173
C + L ++V + IVELFES D E YF A+WFYRAEDTVIKD L D+K
Sbjct: 25 CFWCLQLLSFVFIGTSLCSTFSTIVELFESHDKEYYFTAQWFYRAEDTVIKDHGNLFDKK 84
Query: 174 RVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNIN 233
R+F SDV+D+NPL+C+V K I ++ + AK+K IPP + Y+DMKYT+P+LTF NI+
Sbjct: 85 RIFKSDVKDENPLDCLVKKVGIVRISPDAS-AAKKKKIPPSEFYFDMKYTVPYLTFSNID 143
Query: 234 NESNR----------------------RDSDASSTISSETGSNSPIGQPEM--SLLDLYS 269
N R R S+ SP G P +L +Y
Sbjct: 144 NAPARIESETSTLSSESGILNFRIWYLRGHVIFSSKERHCLDYSP-GYPTSLEIMLAIYQ 202
Query: 270 GCGAM-STGLCIG 281
CG++ S GLCIG
Sbjct: 203 PCGSIFSAGLCIG 215
>gi|84686808|ref|ZP_01014695.1| DNA methylase, C-5 cytosine-specific family protein [Maritimibacter
alkaliphilus HTCC2654]
gi|84665239|gb|EAQ11718.1| DNA methylase, C-5 cytosine-specific family protein
[Rhodobacterales bacterium HTCC2654]
Length = 336
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 152/338 (44%), Gaps = 51/338 (15%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
G++D + GGPPCQG S P+ + +D +N L F+ ++ +PK VL+ENV ++
Sbjct: 6 GELDLVAGGPPCQGFS----INAPKRSADDDRNSLFLEFLRFVDEFEPKAVLIENVPGLV 61
Query: 504 KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP--QYPLP 561
F GG + + L Y + I+ A +G+PQ R R + G R + P +P P
Sbjct: 62 SFEGGGTLQAILLALGHHGYSADVKILYAPHFGVPQTRWRTVIIGIRGDQADPLRAFPEP 121
Query: 562 THEIVARGVIPNEFQ-EIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERK-YGT 619
R + F+ + IVA N +L V + DAI DLP + N E ERK Y +
Sbjct: 122 VRNAPLRVNFTSNFEGKNIVALPTN--LELPSFVSVRDAIDDLPALANGEIGKERKNYRS 179
Query: 620 VARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFR 679
+ +FQ +R V+N H ++ + +R+ IP G N+
Sbjct: 180 GPQNDFQVAMRNGSDGVLN---------------HEAPRLGEINIKRMSFIPP--GGNWT 222
Query: 680 DLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVV 739
D+P + L+P + TK +GR+ D + +T++
Sbjct: 223 DIP------------------------EDLLPRGMRRARRSDHTKRYGRVAPDGLASTIL 258
Query: 740 TRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
T+ PH H QDR T+RE AR+Q FPD Y+ G
Sbjct: 259 TKCDPHWGAYFHYEQDRCFTVREAARIQTFPDSYRFVG 296
>gi|156936516|ref|YP_001440431.1| hypothetical protein ESA_pESA2p06562 [Cronobacter sakazakii ATCC
BAA-894]
gi|156534770|gb|ABU79595.1| hypothetical protein ESA_pESA2p06562 [Cronobacter sakazakii ATCC
BAA-894]
Length = 415
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 157/345 (45%), Gaps = 53/345 (15%)
Query: 438 NILPLP-GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLM 496
N+L L G++D I GGPPCQG S P+ + ED +N ++ + +P+ VL+
Sbjct: 77 NLLGLKRGELDLIAGGPPCQGFS----INAPKRSTEDSRNHLFREYLRFVSEFQPRAVLI 132
Query: 497 ENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR-PFKKL 555
ENV ++ F GG + L ++ Y+ + I+ A YG+PQ R R + G R
Sbjct: 133 ENVPGMVSFEGGATLDAILESLKNLGYEADVRILYAPHYGIPQTRWRTIILGCRDGLNPT 192
Query: 556 PQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLE--KGVLLSDAISDLPLVTNNE-SE 612
+P P + R ++F + N P LE V + DAI DLP + N E E
Sbjct: 193 ELFPEPLRQAPVRVNFTSQFGGKNLV---NLPISLELPSHVTVRDAIGDLPSLCNGEIGE 249
Query: 613 DERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPK 672
+ Y A ++QK +R+ V +A+++ ++N ER+ IP+
Sbjct: 250 QVKSYRHSADNQYQKLMRIGSDGVTCHEAARLS------------KIN---LERMAHIPQ 294
Query: 673 RKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWD 732
G N+ ++P L+ P R+ +S TK +GR+ D
Sbjct: 295 --GGNWTNIPDELL---------PRGMRMARRS---------------DHTKRYGRVHPD 328
Query: 733 EIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ +T++T+ PH H QDR T+RE ARLQ FPD Y G
Sbjct: 329 GLASTILTKCDPHWGAYFHYEQDRTFTVREAARLQSFPDTYTFCG 373
>gi|153868905|ref|ZP_01998633.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
gi|152074513|gb|EDN71359.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
Length = 418
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 162/344 (47%), Gaps = 55/344 (15%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
G++D + GGPPCQG S P +L+D +N ++ V + L PK +L+ENV I+
Sbjct: 99 GEIDLLAGGPPCQGFS----INAPIRSLDDDRNYLFREYISVAQELLPKAILIENVPGII 154
Query: 504 KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLR-VFLWGARPFK--KLPQYPL 560
G + L + Y+ I+ AG YG+PQ R R +FL P K P+ PL
Sbjct: 155 SLGKGTVVEKIYSELEQLGYKVNHRILFAGHYGVPQMRFRTIFLAIHLPDVEIKFPE-PL 213
Query: 561 PTHEIVARGVIPNEF-QEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGT 619
+ VA E +++ ++ + L+ + DAISD+P + + E ++ KYG+
Sbjct: 214 YNAKAVANFTGAKELCLDVLPLFSQS----LKPQTSVWDAISDMPKIESGEKNEKIKYGS 269
Query: 620 -VARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANF 678
++E+QK +R + +Y+H + + +R+ IP +G ++
Sbjct: 270 PYPKSEYQKILR---------------NGSDYVYNHNCNNLGQINLDRLKHIP--QGGSW 312
Query: 679 RDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTV 738
RD+P L+P + TK +GRL + + +T+
Sbjct: 313 RDIP------------------------FELLPAGLKRARRSDHTKRYGRLDPNGLCSTI 348
Query: 739 VTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+T+ PH HP+QDRV+++RE AR+Q FPD Y G V ++
Sbjct: 349 LTKCDPHWGSFFHPTQDRVISVREAARIQSFPDSYHFTGSVTQQ 392
>gi|402904162|ref|XP_003914916.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Papio anubis]
Length = 1706
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 174/424 (41%), Gaps = 93/424 (21%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 1259 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 1316
Query: 492 KYVLMENVVDILK-------FSGGFLARYAVGRLV---------------SMDYQTRLGI 529
++ L+ENV + + GR + S R I
Sbjct: 1317 RFFLLENVRNFVSXXXXXXXXXXXXXXXXXAGRWMWPAHDPASSQPSLTESRVQWHRPAI 1376
Query: 530 MA------------AGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARG------VI 571
A AG YG+ Q R R + A P +KLP +P P H R V
Sbjct: 1377 QAAEAGVVLCPTGGAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVD 1436
Query: 572 PNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRL 631
+F I ++ + + + D +SDLP V N S E Y ++ FQ+ +R
Sbjct: 1437 DKKFVSNITRLSSGP----FRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRG 1492
Query: 632 RRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDN- 690
++ + L DH ++ R+ IP G+++RDLP + V +
Sbjct: 1493 AQYQPI-------------LRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDG 1539
Query: 691 ----KVRWDPSMER-------------VMLKSGKPLVPDYAMKF-------------EHQ 720
K+R+ + +++GK P A +F H
Sbjct: 1540 TMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDP-AARQFNTLIPWCLPHTGNRHN 1598
Query: 721 SSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGP 778
+GRL WD +T VT +P + +LHP Q RV+++RE AR QGFPD Y+LFG
Sbjct: 1599 HWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGN 1658
Query: 779 VKER 782
+ ++
Sbjct: 1659 ILDK 1662
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFE-SVDGEPYFKARWFYRAED 160
+ +Y + +D +GD V ++ + Y+AR+ L+E S++G+ F A WF D
Sbjct: 800 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSINGQ-MFHAHWFCAGTD 858
Query: 161 TVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
TV L D +FL D +D L+ I SK K+
Sbjct: 859 TV---LGATSDPLELFLVDECEDMQLSYIHSKVKV 890
>gi|56695946|ref|YP_166300.1| C-5 cytosine-specific family DNA methylase [Ruegeria pomeroyi
DSS-3]
gi|56677683|gb|AAV94349.1| DNA methylase, C-5 cytosine-specific family [Ruegeria pomeroyi
DSS-3]
Length = 373
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 148/335 (44%), Gaps = 68/335 (20%)
Query: 443 PGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDI 502
PG++ + GGPPCQ S +N Q + D + ++ +++ L+P++++MENV I
Sbjct: 70 PGELTVLAGGPPCQAYSVYNH----QRGMHDERATLFKEYLRIVDGLRPEWIVMENVTGI 125
Query: 503 LKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
GG L ++ Y+ ++ A YG+PQ R RV G R + +P PT
Sbjct: 126 YSIGGGEAVAAIKSELAALGYEVEEAVLRAEEYGVPQERRRVVFIGNRVGVPI-SHPEPT 184
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVAR 622
H P + V + DAI DLP + N E++ + Y
Sbjct: 185 H----------------------GPGRSMPFVTIKDAIGDLPALENGEAKPDAAYLDGKP 222
Query: 623 TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLP 682
T +Q+ +R + N ++ ++ QVN D R+ IP G ++RD+P
Sbjct: 223 TSYQRQMRGNATVITNHAAPRLG------------QVNMD---RLPHIPP--GGSWRDIP 265
Query: 683 GVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA 742
+D L+P + + TK +GR+ WD + TV+T+
Sbjct: 266 -----------FD-------------LLPAGMKRAKRSDHTKRYGRMTWDGLSCTVLTKC 301
Query: 743 QPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
H +HP QDR +++RE ARLQ FPD ++ G
Sbjct: 302 DIHWGAYIHPEQDRAISVREAARLQAFPDWFEFHG 336
>gi|385139885|gb|AFI41915.1| Met1-type cytosine DNA-methyltransferase, partial [Betula
platyphylla]
Length = 169
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LPLPG VDFI GGPPCQG SG NRF Q+ ++ +L F+ +Y +PKY L+E
Sbjct: 40 NNLPLPGQVDFINGGPPCQGFSGMNRFN--QSTWSKVQCEMILAFLSFADYFRPKYFLLE 97
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ G R + L+ M YQ R GI+ AG++G+ Q R R F+W A P + LP+
Sbjct: 98 NVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPEEILPE 157
Query: 558 YPLPTHEIVA 567
+P P H A
Sbjct: 158 WPEPMHVFAA 167
>gi|384921047|ref|ZP_10021038.1| DNA-cytosine methyltransferase [Citreicella sp. 357]
gi|384465060|gb|EIE49614.1| DNA-cytosine methyltransferase [Citreicella sp. 357]
Length = 374
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 151/338 (44%), Gaps = 69/338 (20%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
++D + GGPPCQG S +N Q + D ++ ++ ++E L PK+++MENV I+
Sbjct: 68 ELDCLAGGPPCQGYSVYNH----QRGMHDERSHLFKEYLRIVEGLMPKWLVMENVTGIMS 123
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
G + + + + Y I+ A YG+PQ R RV G R + +P TH
Sbjct: 124 AGEGEAFQAVLAGIRGLGYDVEAKILRAEDYGVPQERRRVVFIGNRIGSPII-WPQKTH- 181
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
G+ P F I DA+SDLP + N E + KY T +E
Sbjct: 182 --GEGLKP--FTTI------------------KDALSDLPELLNGEDKGVGKYKTRPTSE 219
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q+ +R L+++H ++ + ER+ IP +G ++RD+P
Sbjct: 220 YQRELR---------------KGSQLVHNHSASKLGAINIERMRYIP--QGGSWRDVP-- 260
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQP 744
+D L+P + + TK +GR+ WD TV+T+
Sbjct: 261 ---------YD-------------LLPAGMKRAKRSDHTKRYGRMQWDGQSCTVLTKCDI 298
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
H +HP QDR +T+RE AR+Q FPD + GP E+
Sbjct: 299 HWGAYIHPEQDRSITVREAARIQSFPDWFHFTGPRTEQ 336
>gi|222840488|gb|ACM68681.1| DNA methyltransferase 1 [Capra hircus]
Length = 1420
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 121/257 (47%), Gaps = 25/257 (9%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P+Y L
Sbjct: 1131 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1188
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P + L
Sbjct: 1189 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEPL 1248
Query: 556 PQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNN 609
P +P P H R V +F I ++ + + + D +SDLP V N
Sbjct: 1249 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEVRNG 1304
Query: 610 ESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCC 669
S E Y ++ FQ+ +R ++ + L DH ++ R+
Sbjct: 1305 ASALEISYNGEPQSWFQRQLRGSQYQPI-------------LRDHICKDMSALVAARMRH 1351
Query: 670 IPKRKGANFRDLPGVLV 686
IP G+++RDLP + V
Sbjct: 1352 IPLAPGSDWRDLPNIEV 1368
Score = 39.3 bits (90), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 668 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 727
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK ++
Sbjct: 728 V---LGATSDPLELFLVDECEDMQLSYIHSKVQV 758
>gi|208964726|gb|ACI31553.1| MET1 [Nicotiana benthamiana]
Length = 227
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 78/124 (62%), Gaps = 2/124 (1%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LPLPG VDFI GGPPCQG SG NRF Q+ ++ +L F+ +Y +PKY L+E
Sbjct: 106 NSLPLPGQVDFINGGPPCQGFSGMNRFN--QSTWSKVQCEMILAFLSFADYYRPKYFLLE 163
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
NV + + F+ R V L+ M YQ R GI+ AG++G+PQ R R F+W A P + LP+
Sbjct: 164 NVRNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAFGVPQSRKRAFIWAASPEEILPE 223
Query: 558 YPLP 561
+P P
Sbjct: 224 WPEP 227
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 259 QPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEA 318
Q ++ LD+++GCG +S GL SGV T+WAI+ A + K NHPE +V +
Sbjct: 15 QNRLATLDIFAGCGGLSEGL----QRSGVS-DTKWAIEYEEPAGDAFKLNHPEAEVFIQN 69
Query: 319 ADDFL 323
+ FL
Sbjct: 70 CNVFL 74
>gi|347839917|emb|CCD54489.1| hypothetical protein [Botryotinia fuckeliana]
Length = 983
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 164/374 (43%), Gaps = 85/374 (22%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDI---KNRQLLVFMDVIEYLKPKYVLM 496
+P GD+D I GGPPCQG S NR NP L++ + F+ +++ +PKY L+
Sbjct: 393 MPAKGDIDMIVGGPPCQGWSRANRKNNPNKILKEPICPMREAIATFLSYVDFYRPKYFLL 452
Query: 497 ENV----------VDILKFS--GGFL----ARYAVGRLVSMDYQTRLGIMAAGSYGLPQF 540
ENV DI +S GG L ++ L S+ YQ + + AG+YG+P
Sbjct: 453 ENVPGIKHHPLNGNDIPNYSPDGGPLKNGAMKFIFRFLTSLGYQCQHATLQAGAYGVPSS 512
Query: 541 RLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKG-----VL 595
R RV +W P KLP+YP PT+ V + V N P L + +
Sbjct: 513 RKRVIIWACLPGHKLPKYPEPTN--VFKSVPRN-------------PPYLRRSAPHWPIN 557
Query: 596 LSDAISDLPLVTNNESEDERKYGT----------------VARTEFQKYIRLRRHDVVNL 639
+ D ISDL L+ +E K+ T R+E+Q+ ++ N
Sbjct: 558 IGDCISDLSLIGVENPHEETKHSTSKNKKNVGSGKQICASTPRSEYQRRVQ-------NS 610
Query: 640 SSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSME 699
S Q L++H +++ ERV +P GA++R + L+ +M
Sbjct: 611 DSCQP------LHNHVTGRISVIQNERVRTVPLEAGADYRRMDEKLMT--------KAMR 656
Query: 700 RVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLT 759
V+ + GK ++++ +GRL D++ T ++ LHP RV T
Sbjct: 657 EVLEEMGK------NKNYQNKKLEGRYGRLSADDLFKIFTT---TRDKWTLHPYLPRVFT 707
Query: 760 IRENARLQGFPDCY 773
IRE AR GFPD +
Sbjct: 708 IRELARGMGFPDSF 721
>gi|47220040|emb|CAG12188.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1209
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 164/393 (41%), Gaps = 88/393 (22%)
Query: 427 LKEFVTKGYRSNIL----PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L + V G ++N L P GDV+ +CGGPPCQG SG NRF + KN ++ +
Sbjct: 838 LLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSAFKNSLVVSY 895
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ +Y +PK+ L+ENV + + F + + + LV M YQ G++ G P
Sbjct: 896 LSYCDYYRPKFFLLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQVS--GTP---- 949
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISD 602
G + + + + N + + + + D +SD
Sbjct: 950 --------------------------GCVGSGWAAGVYLSRGNG--GIYRTITVRDTMSD 981
Query: 603 LPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNND 662
LP + N S E Y ++ FQ+ IR ++ +L DH ++
Sbjct: 982 LPEIRNGASALEISYNGEPQSWFQRQIRGTQYQ-------------PILRDHICKDMSAL 1028
Query: 663 DYERVCCIPKRKGANFRDLPGVLV-----GPDNKVRWDPSMER------------VMLKS 705
R+ IP G+++RDLP + V K+R+ S ++
Sbjct: 1029 VEGRMRHIPLAPGSDWRDLPNIEVRLRDGTMTKKLRYTHSDKKNGRSSTGALRGVCTCAG 1088
Query: 706 GKP--------------LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--L 749
G P +P + H + +GRL WD +T VT +P + +
Sbjct: 1089 GTPCDPADRQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQGRV 1146
Query: 750 LHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
LHP Q RV+++RE AR QGFPD Y+ FG + ++
Sbjct: 1147 LHPEQHRVVSVRECARSQGFPDTYRFFGNILDK 1179
>gi|409990103|ref|ZP_11273531.1| hypothetical protein APPUASWS_04335 [Arthrospira platensis str.
Paraca]
gi|291571237|dbj|BAI93509.1| type II DNA modification methyltransferase [Arthrospira platensis
NIES-39]
gi|409939035|gb|EKN80271.1| hypothetical protein APPUASWS_04335 [Arthrospira platensis str.
Paraca]
Length = 451
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 163/348 (46%), Gaps = 25/348 (7%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
GD+D + GGPPCQG S + + R+P D +NR F+ +E +PK +MENVV IL
Sbjct: 74 GDLDILLGGPPCQGFSTYGK-RDPL----DQRNRLYRYFLKFLEEFRPKAFVMENVVGIL 128
Query: 504 KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
GG++ V + ++Y + + A +G+PQFR RVF+ G +K+ Q P TH
Sbjct: 129 SLEGGYVVEDIVNKAEKLNYGVSVITLDAVDFGVPQFRKRVFILGGSNHQKI-QPPSATH 187
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLP--LVTNNESEDERKYGTVA 621
EI P+ + + + + + +S+AI DLP ++ + + Y V+
Sbjct: 188 EISKNTSKPDSSSYQLCLFPESLDPPYQPAIKVSEAIGDLPEEVLPPRLTHESIPYPPVS 247
Query: 622 R-TEFQKYIRLRRHDVVNLSSAQMAS-RPSLLYDHRPFQVNNDDYERVCCIPKRKGANFR 679
+ +Q+ +R + ++++ S+ +M R L RP DY ++G R
Sbjct: 248 GLSRYQQELRSKTGEILHHSAKRMMGIRRLRLALMRP-----GDYGTEISSRLKEGGFSR 302
Query: 680 DLPGVLVGPDNKV-------RWDPSME---RVMLKSGKPLVPDYAMKFEHQSSTKPFGRL 729
+L L+ N + R D E R +L+ G + + + + RL
Sbjct: 303 ELIDQLLKGGNGLRDIHECRRQDREKEEKLREILQQGHVDIQEVLQSLDSGGFANKYRRL 362
Query: 730 WWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
W+ +T+V +HP DR +++RE+ARLQ FPD Y G
Sbjct: 363 DWNAPSHTLVAHMARDCSDFIHPEFDRFISVRESARLQSFPDRYYFHG 410
>gi|409045787|gb|EKM55267.1| hypothetical protein PHACADRAFT_184079 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1376
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 178/408 (43%), Gaps = 94/408 (23%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
+P PG+VDFI GGPPCQG S N R ++D +N + + +E+ PK+ ++ENV
Sbjct: 943 MPRPGEVDFIYGGPPCQGFSRMNHSR----TVDDYRNTLVCNMLSYVEFYHPKFFMLENV 998
Query: 500 VDIL-------------KFSGGF---LARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLR 543
IL K GG + + + L S+ YQ ++ AG YG PQ RLR
Sbjct: 999 EGILYHPLAATQSGPGRKMEGGVRMGVVKLILRTLTSLGYQVHFKLLQAGQYGAPQSRLR 1058
Query: 544 VFLWGARPFKKLPQYPLPTHEIV----------------ARGVIPNEFQEIIVAYANNQP 587
V GA+ LP +P+PTH A +IP E ++++ N+
Sbjct: 1059 VIFLGAQRGLPLPSFPIPTHCTADDVQQIKLVTGNLLRPAVRIIPFEDKDVV-----NRK 1113
Query: 588 CQLEKG----VLLSDAISDLP--------LVTNNES---EDERKYGTVAR---------- 622
L+ V + DAISDLP L+T+ ++ ++RK + R
Sbjct: 1114 AWLQFAPHLRVSVEDAISDLPKFDWINPALITDPDNIYEINKRKAEGIHRFDALYISEST 1173
Query: 623 --TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDY-----ERVCCIPKRKG 675
+ + Y+ + LS Q R + D Y E V +P ++
Sbjct: 1174 HGSPYAGYVNPEPYTSEPLSRYQKWMRRGVDPDEGVSYQYTKRYKESVIECVVNVPLKEN 1233
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIV 735
AN +LP L NK RW + SGKP P+Y + + F
Sbjct: 1234 ANHINLPNEL---KNK-RWYTGGQ----ISGKP-KPEYLTIYARVNGKWHF--------- 1275
Query: 736 NTVVTRAQPHNR--ILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKE 781
T +T A P+ + LLHP+Q RVLTIRE AR QGFPD Q F +KE
Sbjct: 1276 QTALTSANPNAKGGRLLHPTQKRVLTIREFARAQGFPD-QQKFLSIKE 1322
>gi|405957557|gb|EKC23761.1| DNA (cytosine-5)-methyltransferase 1, partial [Crassostrea gigas]
Length = 993
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 114/218 (52%), Gaps = 11/218 (5%)
Query: 427 LKEFVTKGYRSN----ILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L + V +G + N LP GDV+ +CGGPPCQG SG NRF + + + KN + +
Sbjct: 779 LLKLVMEGEKQNEMGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYS--RFKNSLIASY 836
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ +Y +P++ L+ENV + + F + + A+ L +M YQ G++ AGSYG+PQ R
Sbjct: 837 LSYCDYYRPRFFLLENVRNFVSFKRSMVLKLALRCLTTMGYQCTFGVLQAGSYGVPQTRR 896
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARGV---IPNEFQEIIVAYANNQPCQLEKGVLLSDA 599
R + A P +KLP +P P H R + + + ++ + + + + + D
Sbjct: 897 RAIILAAAPGEKLPFFPEPQHVFAPRAMQLSVQVDDKKFMSNITRMESAPF-RTITVRDT 955
Query: 600 ISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVV 637
+SDLP + N +E Y ++ FQ+ IRL H V
Sbjct: 956 MSDLPEIRNGAKAEEISYQGDPQSHFQR-IRLSGHWAV 992
>gi|109638623|ref|YP_656628.1| ORF120 [Ranid herpesvirus 2]
gi|109138110|gb|ABG25588.1| ORF120 [Ranid herpesvirus 2]
Length = 861
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 169/374 (45%), Gaps = 68/374 (18%)
Query: 441 PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FMDVIEYLKPKYVLMENV 499
P PG V+ + GGPPCQG SG N F + A E RQ++V ++ + E PK ++ENV
Sbjct: 495 PRPGQVECLVGGPPCQGFSGCNFFPKGEKAGE---KRQMMVEYLRMCEMYLPKLFILENV 551
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ G + + + +L+S+ Y G++ AG YGLPQ R R+ + AR LP
Sbjct: 552 QNFTVQEDGAVFKAVLHKLLSLQYSVLCGVVQAGMYGLPQSRRRLLIVAARDDFPLPDML 611
Query: 560 LPTHEIVARGVI-----PNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
P A + +F+ + V + + + L +AI DL ++
Sbjct: 612 PPQLHAFAPSALRLCNSTEKFEPLHVTVP------IFRTITLREAIMDL--------QNT 657
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDH--RPFQVNNDDYERVCCIPK 672
+ + T F + +R P L++H RP + N R+ IP
Sbjct: 658 KSTFSTGCTWFTRKMRA----------------PKQLHNHVTRPLSLANQ--ARIERIPY 699
Query: 673 RKGANFRDLPGVLVGPDNKVRWDP-------------SMERVM--------LKSGKPLVP 711
GA++RDLP V V N P S ER + + + L+P
Sbjct: 700 LPGADWRDLPNVSVKLPNGQVLHPLTYGEKGSVCPCGSGERCLKDVHKANGTRPAETLIP 759
Query: 712 DYAMKFEHQSS--TKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQ 767
+ ++S +GRL W+ V T++T P ++ LLHPS+ R+LT+RE AR+Q
Sbjct: 760 WFLPHTAERNSNWVGCYGRLDWNGYVGTLLTSPDPAHKQGRLLHPSRQRILTVREYARIQ 819
Query: 768 GFPDCYQLFGPVKE 781
GFPD + G +++
Sbjct: 820 GFPDTFIFQGAIED 833
>gi|416020937|ref|ZP_11566837.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea
str. B076]
gi|320321292|gb|EFW77421.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea
str. B076]
Length = 410
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 147/338 (43%), Gaps = 52/338 (15%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
G++D I GGPPCQG S P+ + ED +N ++ + +P+ VL+ENV ++
Sbjct: 79 GELDLIAGGPPCQGFS----INAPKRSTEDSRNHLFREYLRFVTEFQPRAVLIENVPGMV 134
Query: 504 KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR-PFKKLPQYPLPT 562
F GG + L + Y + I+ A YG+PQ R R + G+R +P P
Sbjct: 135 SFEGGATLDAILESLKDLGYDADVRILYAPHYGVPQTRWRTIILGSRCGVDPTALFPEPL 194
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLE--KGVLLSDAISDLPLVTNNE-SEDERKYGT 619
H R ++F + N P LE V + DAI DLP + N E E + Y
Sbjct: 195 HHAPVRVNFTSQFAGKNLV---NLPRSLELPSHVTVKDAIGDLPALCNGEIGEQVKDYRH 251
Query: 620 VARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFR 679
A +Q+ +R V H +++ + ER+ IP G N+
Sbjct: 252 PADNPYQQLMRAGSIGVTC---------------HEAGRLSKINLERMTHIPP--GGNWT 294
Query: 680 DLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVV 739
D+P L+ PS R+ +S TK +GR+ + + +T++
Sbjct: 295 DIPDALL---------PSGMRMARRS---------------DHTKRYGRVNPEGLASTIL 330
Query: 740 TRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
T+ PH H QDR T+RE AR+Q FPD Y G
Sbjct: 331 TKCDPHWGAYFHYEQDRAFTVREAARIQSFPDTYVFCG 368
>gi|341868911|gb|AEK98579.1| chromomethyltransferase 1a2 [Vitis amurensis]
gi|341868913|gb|AEK98580.1| chromomethyltransferase 1a3 [Vitis amurensis]
Length = 70
Score = 122 bits (307), Expect = 7e-25, Method: Composition-based stats.
Identities = 55/70 (78%), Positives = 63/70 (90%)
Query: 458 VSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGR 517
VSGFNRFRN +A L+D KN QL+VFMD++ YLKPKYVLMENVVDILKF+GGFL RYA+GR
Sbjct: 1 VSGFNRFRNTEAPLDDPKNHQLVVFMDIVNYLKPKYVLMENVVDILKFAGGFLGRYAMGR 60
Query: 518 LVSMDYQTRL 527
LVSM+YQ RL
Sbjct: 61 LVSMNYQARL 70
>gi|391230864|ref|ZP_10267070.1| DNA-methyltransferase Dcm [Opitutaceae bacterium TAV1]
gi|391220525|gb|EIP98945.1| DNA-methyltransferase Dcm [Opitutaceae bacterium TAV1]
Length = 412
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 147/337 (43%), Gaps = 52/337 (15%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
G++D + GGPPCQ S + R + + + ++ ++ L P+Y++MENV IL
Sbjct: 83 GEIDCLIGGPPCQAFSYNSHLRTHEGQVAGLFRE----YLRLVGELNPRYLVMENVPGIL 138
Query: 504 KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
G + RL + Y+T I+ A YG+PQ R R+ +R +P+ TH
Sbjct: 139 SVGDGGVVGEIASRLGELGYETDGRIVYAEDYGVPQQRRRMIFVASRIGLPANIFPVGTH 198
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQL-EKGVLLSDAISDLPLVTNNESEDER-KYGTVA 621
G P V + PC + V + AI DLP+ + E + Y T A
Sbjct: 199 -----GPSPKPVSNEHVHRWDPNPCDPPSRLVRVWSAIGDLPVTVSTTDESKALGYRTGA 253
Query: 622 RTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDL 681
+FQ+Y R V+N H + + R+ +P+ G ++RD+
Sbjct: 254 WCDFQRYAREGSLGVLN---------------HHCAGLGPNSLARISHVPQ--GGSWRDI 296
Query: 682 PGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR 741
P + L+P + TK +GRL ++ TV+T+
Sbjct: 297 P------------------------RHLLPAGMQRARTSDHTKRYGRLAPKDLACTVLTK 332
Query: 742 AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGP 778
PH +HP++DRVLT+RE ARLQ FPD + GP
Sbjct: 333 CDPHWGCYIHPNEDRVLTVREAARLQSFPDRFNFIGP 369
>gi|294667855|ref|ZP_06733064.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|292602358|gb|EFF45800.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 410
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 153/338 (45%), Gaps = 52/338 (15%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
G++D I GGPPCQG S P+ + ED +N ++ + +P+ VL+ENV ++
Sbjct: 79 GELDLIAGGPPCQGFS----INAPKRSTEDSRNHLFREYLRFVTEFQPQAVLIENVPGMV 134
Query: 504 KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR-PFKKLPQYPLPT 562
F GG + L + Y + I+ A YG+PQ R R + G+R +P P
Sbjct: 135 SFEGGATLDAILAALKQLGYDADVRILYAPHYGVPQTRWRTIILGSRCGVDPTALFPEPL 194
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLE--KGVLLSDAISDLPLVTNNE-SEDERKYGT 619
+ R ++F + N P LE V + DAI DLP + N E E + Y
Sbjct: 195 RQAPVRVNFTSQFAGKNLV---NLPRSLELPSHVTVKDAIGDLPKLRNGEMGEPVKDYRH 251
Query: 620 VARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFR 679
A +Q+ +R+ V +A+++ ++N ER+ IP G N+
Sbjct: 252 PADNPYQQLMRVGSTGVTCHEAARLS------------KIN---LERMTHIPP--GGNWT 294
Query: 680 DLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVV 739
D+P L+ PS R+ +S +H TK +GR+ D + +T++
Sbjct: 295 DIPDALL---------PSGMRLARRS------------DH---TKRYGRVNPDGLASTIL 330
Query: 740 TRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
T+ PH H QDR T+RE AR+Q FPD Y G
Sbjct: 331 TKCDPHWGAYFHYEQDRAFTVREAARIQSFPDSYVFCG 368
>gi|421735907|ref|ZP_16174779.1| hypothetical protein B217_02580 [Bifidobacterium bifidum IPLA
20015]
gi|407296797|gb|EKF16307.1| hypothetical protein B217_02580 [Bifidobacterium bifidum IPLA
20015]
Length = 398
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 149/346 (43%), Gaps = 58/346 (16%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
G +D + GGPPCQG S P + ED +N ++ ++ +P+ +L+ENV ++
Sbjct: 77 GQLDLVAGGPPCQGFS----INAPVRSNEDPRNHLFREYLRYVDAFQPRAILIENVPGLV 132
Query: 504 KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ--YPLP 561
F G + L + Y + I+ A YG+PQ R R + G R +PQ +P P
Sbjct: 133 SFEHGGTLHAILDALADLGYGADVHILGAPYYGVPQMRWRTIILGLR-GAVIPQSAWPEP 191
Query: 562 THEIVARGVIPNEF--QEIIVAYANNQPCQLEKG--VLLSDAISDLPLVTNNE-SEDERK 616
T R F ++I+ QP L +AI DLP + N E E ++
Sbjct: 192 TRHAPVRANFTTTFDGRQIV-----KQPSPETDAPFTTLREAIGDLPSLQNGERGEAVKE 246
Query: 617 YGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGA 676
Y + ++Q+ +R V+N H +++ + +R+ I ++G
Sbjct: 247 YPVRPQCDYQRALRRGSIGVLN---------------HEAPRLSAINMQRLNYI--QQGG 289
Query: 677 NFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVN 736
N+ D+P L+P K TK +GR WD + +
Sbjct: 290 NWTDIP------------------------DELLPKGMRKARKSDHTKRYGRPMWDGLSS 325
Query: 737 TVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
T++T+ PH HP Q+R T+RE AR+Q FPD Y G E+
Sbjct: 326 TILTKCDPHWGAFFHPDQNRAFTVREAARIQSFPDHYVFTGSQAEQ 371
>gi|393216766|gb|EJD02256.1| S-adenosyl-L-methionine-dependent methyltransferase, partial
[Fomitiporia mediterranea MF3/22]
Length = 1118
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 166/406 (40%), Gaps = 106/406 (26%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP PG+VD I GGPPCQ SG N ++ ++DI+ + + +E+ PKYV +ENV
Sbjct: 694 LPSPGEVDLIMGGPPCQPFSGMNSWKR----VDDIRQTCIPTVLSYVEFYSPKYVCIENV 749
Query: 500 VDIL-----------KFSGGF---LARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVF 545
+L + GG + ++ + S+ YQ ++ ++ A YG PQ R RV
Sbjct: 750 TGLLYYRLKGRQEGRRIVGGIESGMVKFVMRAFTSLGYQCQMKVLNAADYGSPQQRNRVI 809
Query: 546 LWGARPFKKLPQYPLPTH-----EIVARGVIPNEFQEIIVAYANNQPCQLEK----GVLL 596
W AR LP++P TH + I N F + A N + E+ V +
Sbjct: 810 FWAARLDLALPKWPTQTHIPRQGHKAVQRRITNGFLAPL-ASRNESGEKHEQAPFYAVTI 868
Query: 597 SDAISDLPLV---------------------TNNESEDERK-----------------YG 618
+AI DLP T + D+RK Y
Sbjct: 869 KEAIDDLPAWDWENPGIVYPDGARKQDSNKPTFPATVDQRKLDTEDAQAVSGYNYPVRYA 928
Query: 619 TVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANF 678
+ RT +Q + R + + + + PSL+ ER +P + ANF
Sbjct: 929 SAPRTLYQAFCRKGQGHLARVEAHCTILYPSLV------------VERTVNVPIKPLANF 976
Query: 679 RDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTV 738
DLP L G K + +S + RL +E T+
Sbjct: 977 NDLPKSLKGE-------------------------KAKGDAESKKDTYWRLDENEQFRTL 1011
Query: 739 VTRAQPHNR--ILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+T P ++ ++HP+ RVL+ RE AR QGFPD Y+ F P +ER
Sbjct: 1012 MTSYNPGSKGACVIHPTDKRVLSARELARAQGFPDDYE-FCPAEER 1056
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 28/219 (12%)
Query: 116 YNLGDDAYVKAEEGAVDY--IARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRK 173
Y++ D YVK + IA+I ++ S DG P + F R + T K+ L+ R
Sbjct: 480 YHVNDFVYVKMPTRQIGLLEIAQIAKILPS-DGNPQLEVTLFERPKYTP-KEATPLLQRS 537
Query: 174 RVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNIN 233
+ V+ + +C+ I ++ D++A + P + D K L I
Sbjct: 538 LLSTGKVKKMS-ADCLDGHCFILRISDIDDIDAWLEG--PDNFVIDQKRPLEQCQKCLIA 594
Query: 234 NESNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRW 293
E D+ + + + +DL+SG G ++TG+ SG + T W
Sbjct: 595 RELFSESEDS-------------VKELPLRAMDLFSGAGGLTTGM----DQSGF-IKTCW 636
Query: 294 AIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKL 332
A++ P A +SLK NH +T V N+ D LLK A+L
Sbjct: 637 AVERCPAAAQSLKANHADTVVYNQ---DCSELLKHVAEL 672
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 18/128 (14%)
Query: 92 ALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAE------EGAVDYIARIVELFESVD 145
A+ EE+ ++ Y +DG Y++ D V + G+ + I+ +E +
Sbjct: 273 AIAWGEEIPASQGLYKSVFMDGVEYHMNDTVAVSTDGNGETAAGSSTWFGIIMYFYEVAE 332
Query: 146 GEP--------YFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAE 197
+P YF RWF T++ + A + + +FL D DDNP+ I+ K +
Sbjct: 333 RKPGRSPRSGKYFHIRWFEHGSRTILGETA---NPQALFLLDQCDDNPVETILQKISVRH 389
Query: 198 VATNMDLE 205
++ + DLE
Sbjct: 390 LSVS-DLE 396
>gi|326454730|gb|ADZ74246.1| chromomethyltransferase 1a1 [Vitis amurensis]
Length = 70
Score = 121 bits (304), Expect = 1e-24, Method: Composition-based stats.
Identities = 54/70 (77%), Positives = 63/70 (90%)
Query: 458 VSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGR 517
VSGFNRFRN +A+L+D KN QL+VFMD++ YLKPKYVLMENVVDILKF+GGFL RYA+GR
Sbjct: 1 VSGFNRFRNTEASLDDPKNHQLVVFMDIVNYLKPKYVLMENVVDILKFAGGFLGRYAMGR 60
Query: 518 LVSMDYQTRL 527
LV M+YQ RL
Sbjct: 61 LVFMNYQARL 70
>gi|328543334|ref|YP_004303443.1| DNA methylase [Polymorphum gilvum SL003B-26A1]
gi|326415695|gb|ADZ72758.1| DNA methylase, C-5 cytosine-specific family [Polymorphum gilvum
SL003B-26A1]
Length = 418
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 149/337 (44%), Gaps = 58/337 (17%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
GD+D + GGPPCQ S N R+ D + R ++ ++ L PK ++MENV IL
Sbjct: 90 GDLDCLVGGPPCQSFSHNNHHRSAV----DERARLFEHYLTLVGALNPKTLVMENVPGIL 145
Query: 504 KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
GG + + L + + +G ++A +G PQ R RVF+ +R P PTH
Sbjct: 146 SIDGGRVVDEILASLKELGFDAVVGRLSAEEFGTPQLRRRVFIVASRIGAASELLPNPTH 205
Query: 564 --EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVA 621
+A+ P E A A +P V + AI DLP + N + +
Sbjct: 206 WSPALAKWGGPKERP----AGATKRP------VTVWQAIGDLPEIENGGGVQIAPWASSH 255
Query: 622 -RTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRD 680
T +Q+ +M LY+H + + + +R+ +P+ G N+R+
Sbjct: 256 PTTTYQR---------------EMRRAAPQLYNHVCHALASVNLDRIVHVPE--GGNWRN 298
Query: 681 LPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVT 740
+P + L+P + Q TK +GRL +T++T
Sbjct: 299 VP------------------------RDLLPAGMKRARLQDHTKRYGRLSRGGFASTILT 334
Query: 741 RAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ PH +HP+QDR +++RE ARLQGFPD ++ G
Sbjct: 335 KCDPHWGAYVHPTQDRTISVREAARLQGFPDSFRFAG 371
>gi|89055380|ref|YP_510831.1| DNA-cytosine methyltransferase [Jannaschia sp. CCS1]
gi|88864929|gb|ABD55806.1| DNA-cytosine methyltransferase [Jannaschia sp. CCS1]
Length = 373
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 145/339 (42%), Gaps = 68/339 (20%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
G++ + GGPPCQ S +N Q + D + ++ +++ L+P++++MENV I
Sbjct: 71 GELSVLVGGPPCQAYSVYNH----QRGMHDARASLFREYLRIVDGLRPEWIVMENVTGIY 126
Query: 504 KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
+ G R ++ Y ++ A YG+PQ R RV G R + +P PTH
Sbjct: 127 SIANGEAVRAIKAEFAALGYAVEDAVLRAEDYGVPQERRRVVFIGNRVGAPI-SHPEPTH 185
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVART 623
P + + DAI DLP + N E+ Y +
Sbjct: 186 ----------------------GPGRANPFTKIRDAIGDLPPLDNGENPGRVAYADARPS 223
Query: 624 EFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPG 683
++Q+ +R V N ++ ++ +VN D R+ IP G ++RD+P
Sbjct: 224 KYQRQMRGNAITVGNHAAPRLG------------KVNMD---RLPYIPP--GGSWRDIP- 265
Query: 684 VLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQ 743
L+P+ + + TK +GR+ WD + TV+T+
Sbjct: 266 -----------------------HDLLPEGMKRAKRSDHTKRYGRMTWDGLSCTVLTKCD 302
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
H +HP QDR +++RE ARLQ FPD ++ G E+
Sbjct: 303 IHWGAYIHPEQDRAISVREAARLQAFPDWFEFAGSKTEQ 341
>gi|328857943|gb|EGG07057.1| hypothetical protein MELLADRAFT_85954 [Melampsora larici-populina
98AG31]
Length = 883
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 165/401 (41%), Gaps = 94/401 (23%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP PGD D I G PC S N R ED KN + IE+LKP YV ENV
Sbjct: 446 LPKPGDFDIITAGFPCGSHSTLNVLRKG----EDSKNALCGTALSFIEFLKPTYVYFENV 501
Query: 500 VDILK-----------FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWG 548
+LK + FL R G ++++DYQ R G++ A YG PQ R R L
Sbjct: 502 RGLLKTQLVDRETQEILTHAFL-RLMCGTMITLDYQLRFGVLQAAQYGTPQERRRFILTA 560
Query: 549 ARPFKKLPQYPLPTHEIVARGV---IPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+ LP P PTH + +P++ +I + + + + D ISDLP
Sbjct: 561 VKRGYTLPNLPDPTHFYPDGNLQIKLPDQ-NKIFMDFRTRYSRGTLDPITIGDTISDLPC 619
Query: 606 --------VTNNESEDERK-----------------YGTVARTE---------------- 624
+ + ++ RK +G + +T+
Sbjct: 620 FEYRNPMKIMGDFNKPTRKKFKKRSKECVLVNGDHRFGRLEKTDWVGFQKFKYRINPQNN 679
Query: 625 FQKYIRLRRH---DVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDL 681
FQ Y+R +R D+V + P + H + + E++ IP R+GA+++DL
Sbjct: 680 FQIYLRTQRKEDDDLVLQNDGDEEEEP--INWHVTGRFSEKTVEQIWHIPIREGADYKDL 737
Query: 682 PGVLVGPDNKVRWDPSMERVMLKSGKP---LVPDYAMKFEHQSSTKPFGRLWWDEIVNTV 738
P E + K +P DY+ +E FGRL + TV
Sbjct: 738 P----------------EELKYKEAEPKKSQTKDYSRDYEGN-----FGRLSPHLLFRTV 776
Query: 739 VTRAQPHNR----ILLHPSQDRVLTIRENARLQGFPDCYQL 775
+T P N+ +LHPSQ RVLT+ E R QGFPD + L
Sbjct: 777 ITTMDPRNQGRTGQVLHPSQHRVLTVLEAQRAQGFPDWFVL 817
>gi|402224966|gb|EJU05028.1| S-adenosyl-L-methionine-dependent methyltransferase [Dacryopinax sp.
DJM-731 SS1]
Length = 1321
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 161/385 (41%), Gaps = 90/385 (23%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP PGD D I GPPCQG S N +R +DIKN + + ++Y +P++ L+ENV
Sbjct: 923 LPNPGDPDIIICGPPCQGYSVLNSYRR----TDDIKNTLVANALSYVDYFRPRFFLLENV 978
Query: 500 VDILKFSGGFLA--------------RYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVF 545
+L G L ++ V L + YQ R+ ++ AG +G+ Q R RVF
Sbjct: 979 QPLLNSRGKVLKPGDIDERIIENAVRKFIVRFLTARGYQVRVTVLQAGEFGVAQHRARVF 1038
Query: 546 LWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDL-- 603
W A+ + LP++PLPTH AR P+ + A PC V + D I DL
Sbjct: 1039 FWAAKRNEALPEFPLPTH-TWAR-TTPSRRDALGGA---PLPC-----VTVKDVIGDLPE 1088
Query: 604 ------------PLVTN------NESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMA 645
P+V + +RK T F Y L
Sbjct: 1089 WHWINPKKLMPRPVVPKPAGPHFDAVTYDRKTRTCGYAGFVPYATL---PATAYQKELRG 1145
Query: 646 SRPSLLYDHRPFQVNNDDYERVCCIPKRK-------GANFRDLPGV-----LVGPDNKVR 693
+R + Y H + ERVC +P+ K G ++R+L G L P ++
Sbjct: 1146 NRKGVRY-HSTLTYVGESVERVCNVPRPKGDKCLDAGRDYRELDGRFSVWHLTCPHSRA- 1203
Query: 694 WDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLH 751
R GK + R++ D TV+TR +P + +LH
Sbjct: 1204 -----ARGGYGEGK------------------YARVYPDRPARTVLTRNEPTGKQGRVLH 1240
Query: 752 PSQDRVLTIRENARLQGFPDCYQLF 776
+Q+RVL+ +ENARLQGF D +
Sbjct: 1241 YNQNRVLSAQENARLQGFADTFTFI 1265
>gi|23306232|emb|CAD43079.1| DNA methyltransferase 1c [Paracentrotus lividus]
Length = 1375
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 102/190 (53%), Gaps = 9/190 (4%)
Query: 423 CKEKLKEFVTKGYRSN----ILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQ 478
C E L+ V +G +++ LP GDV+ +CGGPPCQG SG NRF + + + KN
Sbjct: 1184 CNELLR-LVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYS--KFKNSL 1240
Query: 479 LLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLP 538
+ ++ +Y +P++ L+ENV + + + + + A+ L+ M YQ GI+ AG YG+P
Sbjct: 1241 ISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGVP 1300
Query: 539 QFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLE--KGVLL 596
Q R R + A P +KLP YP P H R + +NNQ C + + +
Sbjct: 1301 QTRRRAIILAAAPGEKLPFYPEPLHVFSTRACSLSVMIGEKKIESNNQWCLSAPYRTITV 1360
Query: 597 SDAISDLPLV 606
D++SDLP +
Sbjct: 1361 RDSMSDLPTI 1370
>gi|390993340|ref|ZP_10263514.1| DNA-cytosine methyltransferase family protein [Xanthomonas
axonopodis pv. punicae str. LMG 859]
gi|372551927|emb|CCF70489.1| DNA-cytosine methyltransferase family protein [Xanthomonas
axonopodis pv. punicae str. LMG 859]
Length = 404
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 150/338 (44%), Gaps = 52/338 (15%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
G++D + GGPPCQG S P+ + ED +N ++ + +P+ VL+ENV ++
Sbjct: 73 GELDLVAGGPPCQGFS----INAPKRSTEDSRNHLFREYLRFVTEFQPRAVLIENVPGMV 128
Query: 504 KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR-PFKKLPQYPLPT 562
F GG + L + Y + I+ A YG+PQ R R + G+R + +P P
Sbjct: 129 SFEGGATLDAILESLKQLGYDADVRILYAPHYGVPQTRWRTIILGSRCGVDPMALFPEPL 188
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLE--KGVLLSDAISDLPLVTNNE-SEDERKYGT 619
+ R ++F + N P LE V + DAI DLP + N E E + Y
Sbjct: 189 RQAPVRVNFTSQFAGKNLV---NLPRSLELPSHVTVKDAIGDLPALHNGEIGEQVKDYRH 245
Query: 620 VARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFR 679
A +Q+ +R V +A+++ ++N ER+ IP G N+
Sbjct: 246 PADNPYQQLMRAGSTGVTCHEAARLS------------KIN---LERMTHIPP--GGNWT 288
Query: 680 DLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVV 739
D+P L+ P R+ +S TK +GR+ D + +T++
Sbjct: 289 DIPEALL---------PRGMRMARRS---------------DHTKRYGRVNPDGLASTIL 324
Query: 740 TRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
T+ PH H QDR T+RE AR+Q FPD Y G
Sbjct: 325 TKCDPHWGAYFHYEQDRAFTVREAARIQSFPDTYVFCG 362
>gi|418519200|ref|ZP_13085307.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas axonopodis
pv. malvacearum str. GSPB1386]
gi|410700593|gb|EKQ59141.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas axonopodis
pv. malvacearum str. GSPB1386]
Length = 400
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 150/338 (44%), Gaps = 52/338 (15%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
G++D + GGPPCQG S P+ + ED +N ++ + +P+ VL+ENV ++
Sbjct: 69 GELDLVAGGPPCQGFS----INAPKRSTEDSRNHLFREYLRFVTEFQPRAVLIENVPGMV 124
Query: 504 KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR-PFKKLPQYPLPT 562
F GG + L + Y + I+ A YG+PQ R R + G+R + +P P
Sbjct: 125 SFEGGATLDAILESLKQLGYDADVRILYAPHYGVPQTRWRTIILGSRCGVDPMALFPEPL 184
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLE--KGVLLSDAISDLPLVTNNE-SEDERKYGT 619
+ R ++F + N P LE V + DAI DLP + N E E + Y
Sbjct: 185 RQAPVRVNFTSQFAGKNLV---NLPRSLELPSHVTVKDAIGDLPALHNGEIGEQVKDYRH 241
Query: 620 VARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFR 679
A +Q+ +R V +A+++ ++N ER+ IP G N+
Sbjct: 242 PADNPYQQLMRAGSTGVTCHEAARLS------------KIN---LERMTHIPP--GGNWT 284
Query: 680 DLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVV 739
D+P L+ P R+ +S TK +GR+ D + +T++
Sbjct: 285 DIPEALL---------PRGMRMARRS---------------DHTKRYGRVNPDGLASTIL 320
Query: 740 TRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
T+ PH H QDR T+RE AR+Q FPD Y G
Sbjct: 321 TKCDPHWGAYFHYEQDRAFTVREAARIQSFPDTYVFCG 358
>gi|188575624|ref|YP_001912553.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|188520076|gb|ACD58021.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas oryzae pv.
oryzae PXO99A]
Length = 395
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 151/345 (43%), Gaps = 53/345 (15%)
Query: 438 NILPLP-GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLM 496
N+L L G++D I GGPPCQG S P+ + ED +N ++ + +P+ VL+
Sbjct: 57 NLLGLKRGELDLIAGGPPCQGFS----INAPKRSTEDSRNHLFREYLRFVTEFQPRAVLI 112
Query: 497 ENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR-PFKKL 555
ENV ++ F GG + L + Y + I+ A YG+PQ R R + G+R
Sbjct: 113 ENVPGMVSFEGGATLDAILESLKQLGYDADVRILYAPHYGVPQTRWRTIILGSRCGIDPT 172
Query: 556 PQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLE--KGVLLSDAISDLPLVTNNE-SE 612
+P P + R ++F + N P LE V + DAI DLP++ N E E
Sbjct: 173 ALFPEPLRQAPVRVNFTSQFAGKNLV---NLPRSLELPSHVTVKDAIGDLPVLRNGEIGE 229
Query: 613 DERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPK 672
+ Y RH V N M + + H +++ + ER+ IP
Sbjct: 230 PVKDY---------------RHPVDNPYQQLMRVGSTGVTCHEAARLSKINLERMAHIPP 274
Query: 673 RKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWD 732
G N+ D+P L+ P R+ +S TK +GR+ D
Sbjct: 275 --GGNWTDIPEALL---------PRGMRMARRS---------------DHTKRYGRVNPD 308
Query: 733 EIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ +T++T+ PH H QDR T+RE AR+Q FPD Y G
Sbjct: 309 GLASTILTKCDPHWGAYFHYEQDRAFTVREAARIQSFPDTYVFCG 353
>gi|79835456|gb|ABB52087.1| Mod [Arthrospira platensis]
Length = 443
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 162/348 (46%), Gaps = 25/348 (7%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
GD+D + GGPPCQG S + + R+P D +NR F+ +E +PK +MENVV IL
Sbjct: 74 GDLDILLGGPPCQGFSTYGK-RDPL----DQRNRLYRYFLKFLEEFRPKAFVMENVVGIL 128
Query: 504 KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
GG++ V + ++Y + + A +G+PQFR RVF+ G +K+ Q P TH
Sbjct: 129 SLEGGYVVEDIVNKAEKLNYGVSVITLDAVDFGVPQFRKRVFILGGSNHQKI-QPPSATH 187
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLP--LVTNNESEDERKYGTVA 621
EI P+ + + + + + +S+AI DLP ++ + + Y V+
Sbjct: 188 EISKNTSKPDSSSYQLCLFPESLDPPYQPAIKVSEAIGDLPEEVLPPRLTHESIPYPPVS 247
Query: 622 R-TEFQKYIRLRRHDVVNLSSAQMAS-RPSLLYDHRPFQVNNDDYERVCCIPKRKGANFR 679
+ +Q+ +R + ++++ S+ +M R L RP DY ++G R
Sbjct: 248 GLSRYQQELRSKTGEILHHSAKRMMGIRRLRLALMRP-----GDYGTEISSRLKEGGFSR 302
Query: 680 DLPGVLVGPDNKV-------RWDPSME---RVMLKSGKPLVPDYAMKFEHQSSTKPFGRL 729
+L L+ N + R D E R +L+ G + + + + RL
Sbjct: 303 ELIDQLLKGGNGLRDIHECRRQDREKEEKLREILQQGHVDIQEVLQSLDSGGFANKYRRL 362
Query: 730 WWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
W+ +T+V +HP DRV ++RE+ARLQ PD Y G
Sbjct: 363 DWNAPSHTLVAHMARDCSDFIHPEFDRVNSVRESARLQSCPDRYYFHG 410
>gi|89243223|gb|ABD64771.1| Met1 [Volvox carteri f. nagariensis]
Length = 2262
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 2/128 (1%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP PG V + GGPPCQG SG NRF + ++N ++ ++ ++ +P+Y L+ENV
Sbjct: 1832 LPTPGSVALMMGGPPCQGYSGMNRFN--KGLWSQVQNSMVMAYLSYCDFYRPRYFLLENV 1889
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + GG + R V L+ + YQ R GI+ AG +G+PQ R R F+W A P + LP++P
Sbjct: 1890 RNFAVYRGGEVFRLVVRTLLDLGYQVRFGILNAGHFGVPQSRKRTFIWAALPGEVLPEWP 1949
Query: 560 LPTHEIVA 567
P H VA
Sbjct: 1950 TPRHVFVA 1957
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 89/190 (46%), Gaps = 27/190 (14%)
Query: 594 VLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYD 653
V + DAI DLP + N+ D Y V + FQ+ IR S S L D
Sbjct: 2032 VTVRDAIGDLPPIDNDAKTDVLPYTAVPTSAFQRAIR--------------GSAGSELRD 2077
Query: 654 HRPFQVNNDDYERVCCIPKR-KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL-VP 711
H Q+N + ER CIP+ GA++R L + V DPS E +S P +P
Sbjct: 2078 HMVKQMNELNLERCRCIPRGVPGADWRVLLKI-------VAEDPSREFFKGESLVPFCLP 2130
Query: 712 DYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGF 769
+ A + H +GRL T T P ++ + HP QDR++++RE AR QGF
Sbjct: 2131 NTADR--HNGWRGLYGRLDPYGHFPTATTEPNPMGKVGQVFHPDQDRIVSVRECARSQGF 2188
Query: 770 PDCYQLFGPV 779
PD ++ +G V
Sbjct: 2189 PDHFRFYGNV 2198
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 261 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
++ LD+++GCG +S G+ +GV TRWAI+ + A ++ K N+P+ KV
Sbjct: 1741 QLDTLDIFAGCGGLSEGM----HQAGVAR-TRWAIEYDSEAAEAYKLNNPDAKV 1789
>gi|302836690|ref|XP_002949905.1| maintenance DNA methyltransferase [Volvox carteri f. nagariensis]
gi|300264814|gb|EFJ49008.1| maintenance DNA methyltransferase [Volvox carteri f. nagariensis]
Length = 2277
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 2/128 (1%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP PG V + GGPPCQG SG NRF + ++N ++ ++ ++ +P+Y L+ENV
Sbjct: 1847 LPTPGSVALMMGGPPCQGYSGMNRFN--KGLWSQVQNSMVMAYLSYCDFYRPRYFLLENV 1904
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + GG + R V L+ + YQ R GI+ AG +G+PQ R R F+W A P + LP++P
Sbjct: 1905 RNFAVYRGGEVFRLVVRTLLDLGYQVRFGILNAGHFGVPQSRKRTFIWAALPGEVLPEWP 1964
Query: 560 LPTHEIVA 567
P H VA
Sbjct: 1965 TPRHVFVA 1972
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 89/190 (46%), Gaps = 27/190 (14%)
Query: 594 VLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYD 653
V + DAI DLP + N+ D Y V + FQ+ IR S S L D
Sbjct: 2047 VTVRDAIGDLPPIDNDAKTDVLPYTAVPTSAFQRAIR--------------GSAGSELRD 2092
Query: 654 HRPFQVNNDDYERVCCIPKR-KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL-VP 711
H Q+N + ER CIP+ GA++R L + V DPS E +S P +P
Sbjct: 2093 HMVKQMNELNLERCRCIPRGVPGADWRVLLKI-------VAEDPSREFFKGESLVPFCLP 2145
Query: 712 DYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGF 769
+ A + H +GRL T T P ++ + HP QDR++++RE AR QGF
Sbjct: 2146 NTADR--HNGWRGLYGRLDPYGHFPTATTEPNPMGKVGQVFHPDQDRIVSVRECARSQGF 2203
Query: 770 PDCYQLFGPV 779
PD ++ +G V
Sbjct: 2204 PDHFRFYGNV 2213
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 261 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
++ LD+++GCG +S G+ +GV TRWAI+ + A ++ K N+P+ KV
Sbjct: 1756 QLDTLDIFAGCGGLSEGM----HQAGVAR-TRWAIEYDSEAAEAYKLNNPDAKV 1804
>gi|395333804|gb|EJF66181.1| S-adenosyl-L-methionine-dependent methyltransferase [Dichomitus
squalens LYAD-421 SS1]
Length = 1200
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 164/402 (40%), Gaps = 103/402 (25%)
Query: 437 SNILPLP--GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYV 494
+N+ P+P G+VDFI GGPPCQ S N + ++D ++ + +E+ +P Y
Sbjct: 781 TNLPPMPQRGEVDFIYGGPPCQSFSQINHNKK----IDDPRSTLACNMISYVEFYRPMYF 836
Query: 495 LMENVVDILKFSGGF--------------LARYAVGRLVSMDYQTRLGIMAAGSYGLPQF 540
L+ENV IL + ++ + L ++ YQ I+ AG YG PQ
Sbjct: 837 LLENVRGILNAPTDGQPRDQPLDRNICMGVVKFILRSLTALGYQVHFRILQAGQYGTPQG 896
Query: 541 RLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAY------ANNQPCQLEKGV 594
R RV GAR LPQ+P P H+ + V + V Y Q C +
Sbjct: 897 RQRVIFLGARCDIPLPQFPTPQHD-YPKSVQAKNLPDGGVLYPYLRPTGCGQACVSLPAI 955
Query: 595 LLSDAISDLP--------LVTNNESEDERK------------------------------ 616
+AI DLP LV +D +K
Sbjct: 956 TTEEAIGDLPKFDWKNPHLVIARSRQDVQKGQARLAEGIICVEAVPSPSRSLTGFPTPVA 1015
Query: 617 YGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGA 676
Y + FQ ++R D+V + S P+++ ERV +P + GA
Sbjct: 1016 YPQPPLSRFQSWVR-GDSDIVTYHYTRRWS-PAVV-------------ERVVNVPIQPGA 1060
Query: 677 NFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVN 736
N DLP +L P W L PD + K + T +GR+ D
Sbjct: 1061 NHADLPKILQIPC----W--------------LNPDGSSK---SAYTTVYGRIDNDGCFM 1099
Query: 737 TVVTRAQPHNR--ILLHPSQDRVLTIRENARLQGFPDCYQLF 776
T +T P+ + ++HP+Q+R++TIRE AR QGFPD YQ
Sbjct: 1100 TALTTLAPNQKGGKVIHPTQNRIITIREAARAQGFPDSYQFL 1141
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 104/231 (45%), Gaps = 12/231 (5%)
Query: 98 EVLQARCHYTQA---SVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARW 154
E +Q +C ++ + G Y++ D Y G + +I ++VE + EP + R
Sbjct: 537 EAMQEQCIPLESGGVTYRGIDYHVNDFVYHHNSGGNLLHIGQVVEFSDLSCEEPMVQVRR 596
Query: 155 FYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLE--AKQKNIP 212
F R D V+KD A D +R+F++DV + + KA +A ++ E K +
Sbjct: 597 FGRY-DHVVKDKAIPSDNRRLFMTDVIISVKMKAVEGKAFVACPSSPWQREQWVKADDHF 655
Query: 213 PCDLYYDMKYTLPHLTFLNINNESNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCG 272
CDL+ T L L + A+ + ++ L+L++G G
Sbjct: 656 YCDLFAK-SLTPQSLEILQPTALVHCNRCYAAVLEEATEEELLLKTSSKLRGLELFAGAG 714
Query: 273 AMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFL 323
+STGL LSG + TRWA++++ ACK+ + NH + V N+ L
Sbjct: 715 GLSTGL----DLSGF-VETRWAVELSESACKTFQANHQSSLVYNQNTSTLL 760
>gi|389749172|gb|EIM90349.1| S-adenosyl-L-methionine-dependent methyltransferase [Stereum hirsutum
FP-91666 SS1]
Length = 1217
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 163/392 (41%), Gaps = 106/392 (27%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
+P PGD+D I G PCQ SG N ++P +D +N + + +++ +P +MENV
Sbjct: 823 MPQPGDIDIIVAGLPCQSYSGMNHNKDP----DDPRNELVANMLSYVDWYRPPIFVMENV 878
Query: 500 VDILKFS-GGFLARYAV--GR-----------LVSMDYQTRLGIMAAGSYGLPQFRLRVF 545
IL F GG Y + G+ L ++ YQ + ++ A YG PQ R RV
Sbjct: 879 FGILHFPLGGKKKGYRIVDGKPQGVIMLIFRVLTALGYQVHIALLHAPHYGSPQDRRRVI 938
Query: 546 LWGARPFKKLPQYPLPTHEIVARG----VIPNEFQEIIVAYANNQPCQLE---KGVLLSD 598
+ + P LP++P+PTH V R + N+ + +Q + V L +
Sbjct: 939 IMASLPGVPLPKFPVPTHVFVPRAHKFSLCYNQVLHTVTRAHESQDHYYGAPLRSVRLGE 998
Query: 599 AISDLPLV---------TNNESEDE----------------------RKYGTVARTEFQK 627
AISDLP + + ED+ KY + +Q+
Sbjct: 999 AISDLPRFHWADPRASKKSRQREDDGVPALDAIPSKTSSPYVGFQIPTKYAKEPQNRYQR 1058
Query: 628 YIRLRRHDVVNLSSAQMASRPSLLYDHRP-FQVNNDDYERVCCIPKRKGANFRDLPGVLV 686
+R D+V Y + P F VN ER IP R N DLP
Sbjct: 1059 EMREGSGDLVR-------------YQYTPRFGVNV--VERSVNIPMRPNVNHHDLP---- 1099
Query: 687 GPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHN 746
+W ++FE + +T +GRL + T +T P++
Sbjct: 1100 ------KW--------------------LQFESKHTT--YGRLDASQYYATAMTTFTPNS 1131
Query: 747 --RILLHPSQDRVLTIRENARLQGFPDCYQLF 776
LLHP+Q R+LT+RE AR QGFPD Y+L
Sbjct: 1132 SGSRLLHPNQRRILTVREVARGQGFPDDYELL 1163
>gi|449541865|gb|EMD32847.1| hypothetical protein CERSUDRAFT_99217 [Ceriporiopsis subvermispora B]
Length = 1248
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 160/390 (41%), Gaps = 82/390 (21%)
Query: 441 PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVV 500
P PG++D + G PCQ S N F+ D K + M I++ KPKYV +ENV
Sbjct: 841 PKPGEIDVLIAGFPCQPHSTLNMFQKAN----DRKTHLIATLMAYIDHYKPKYVFLENVR 896
Query: 501 DIL------------KFSGGFLA---RYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVF 545
L K GG ++ V + + +Q R G++ A YG PQ R+R F
Sbjct: 897 GFLSHALQAVQANRHKVVGGVEKGGLKWLVATFLELGFQVRFGLLQAAHYGTPQSRVRFF 956
Query: 546 LWGARPFKKLPQYPLPTHEIVARG-----VIPNEFQEIIVAYANNQPCQLEKGVLLSDAI 600
L +R LPQ+P PTH + + +E + A P V + DAI
Sbjct: 957 LIASRRGLPLPQFPTPTHFFHVKDNLEIKLTDDEPAAAVRTAAGVAPFSF---VSIEDAI 1013
Query: 601 SDLP----------------------LVTNNESEDERKYGTVARTEFQKYIRLRRHDVVN 638
DLP + + E ER+ VA + + +V
Sbjct: 1014 GDLPRFDWENPKKLEARQGGRSRSASMRASEEPAPERQVREVACRSDKPFCGFAGSNVEY 1073
Query: 639 LS----SAQMASR--PSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKV 692
S + Q+ SR P++ H + + ERV IP R A++R LP L
Sbjct: 1074 FSEPRTTFQVKSREKPTMDLQHYTRVLKPETVERVINIPLRAKADYRSLPVYL------H 1127
Query: 693 RW---DPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR-- 747
W DPS + ++G P +GRL +E +T VT +P +
Sbjct: 1128 EWQFADPS--SALARNGFP--------------PGLYGRLAPNECFHTTVTNVEPTAKQS 1171
Query: 748 ILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+LHP RV+T+RE AR QGFPD + +
Sbjct: 1172 WVLHPWCKRVITVRELARSQGFPDHFVFYA 1201
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 102/240 (42%), Gaps = 55/240 (22%)
Query: 116 YNLGDDAYVKAEEGAVDYI---------ARIVELFESVDGEPYFKARWFYRAEDTV-IKD 165
Y++GD A ++A++G + + +R V F + R R D + I
Sbjct: 595 YHVGDFALIRADDGPGEIVQVEDIAAQGSRDVRKFVA-----QLTVRLLGRMSDHMQICP 649
Query: 166 LACLVDRKRVFLSDVEDDNPLNCIVSK--AKIAEVATNMDLEAKQKNIPPCDLYYDMKYT 223
L D + +FL+D+ + ++ I + ++A V T +L A + P +
Sbjct: 650 GTVLKDERHLFLTDMRREISVDRIEHRCFVQVAHVGTRENLRAWLDSSP--------YHF 701
Query: 224 LPHLTFLNINNESNRRDSDASSTISSE---------TGSNSPIGQPE-----------MS 263
H F++ N+ S A TI S T N I E M
Sbjct: 702 YAHYKFVD-----NQPGSWAKKTILSPKKALMCKQCTDENEKILGEENDFLNATQRRPMK 756
Query: 264 LLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFL 323
LDL++G GA GL + A+ G +T AI+I+P A ++LK N P+T V N+ A+ L
Sbjct: 757 GLDLFAGAGAF--GLAMEAT--GCIKITH-AIEISPSAARTLKINSPDTIVYNQCANVVL 811
>gi|322792109|gb|EFZ16181.1| hypothetical protein SINV_14765 [Solenopsis invicta]
Length = 298
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP G+V+ ICGGPPCQG SG NRF + Q +L KN ++ F+ +Y KPK+ +MENV
Sbjct: 138 LPQKGEVELICGGPPCQGFSGMNRFNSRQYSL--FKNSLVVSFLSYCDYYKPKFFIMENV 195
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ G + + + LV M YQ GI+ AGSYG+PQ R R+ L A P + LP YP
Sbjct: 196 RNFTSCKKGMVLKLTLRCLVRMGYQCTFGILQAGSYGVPQTRKRMILIAAAPGEILPNYP 255
Query: 560 LPTH 563
P H
Sbjct: 256 EPMH 259
>gi|341868915|gb|AEK98581.1| chromomethyltransferase 2a1 [Vitis amurensis]
Length = 70
Score = 115 bits (288), Expect = 9e-23, Method: Composition-based stats.
Identities = 49/70 (70%), Positives = 63/70 (90%)
Query: 458 VSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGR 517
+SGFNRFRN + LED KN+QL+VFMDV+ YLKP++VLMENVVDI+KF+GG+L RYA+GR
Sbjct: 1 ISGFNRFRNKENPLEDPKNKQLVVFMDVVNYLKPRFVLMENVVDIVKFAGGYLGRYALGR 60
Query: 518 LVSMDYQTRL 527
L+ M+YQTR+
Sbjct: 61 LIGMNYQTRM 70
>gi|18542935|gb|AAL75760.1| Putative chromomethylase [Oryza sativa Japonica Group]
Length = 134
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 58/68 (85%)
Query: 715 MKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQ 774
M F S KPFGRLWWDE V TVVTRA+PHN+I+LHP+Q RVLT+RENARLQGFPD Y+
Sbjct: 1 MSFIKGRSLKPFGRLWWDETVPTVVTRAEPHNQIILHPNQARVLTVRENARLQGFPDYYK 60
Query: 775 LFGPVKER 782
+FGP+KE+
Sbjct: 61 MFGPIKEK 68
>gi|393245687|gb|EJD53197.1| S-adenosyl-L-methionine-dependent methyltransferase [Auricularia
delicata TFB-10046 SS5]
Length = 829
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 155/398 (38%), Gaps = 81/398 (20%)
Query: 425 EKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMD 484
+ L+ + G + + + GGPPCQG S NR R+P D +N +
Sbjct: 319 DALRTIIRTGSAAGFPDRDESIGVLFGGPPCQGFSTLNRHRSP----SDERNLLFANMLS 374
Query: 485 VIEYLKPKYVLMENVVDILKFSGGF---------------LARYAVGRLVSMDYQTRLGI 529
++ +P Y L+ENV +L + V L ++ YQ R+
Sbjct: 375 WVDVYRPTYFLLENVGGMLSIKLRLELAEKDHPAVDVEFGTVKLIVRVLAALGYQARVHY 434
Query: 530 MAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQ 589
+ AG YG PQ R R+ ++G R +LP P TH R + +P
Sbjct: 435 LQAGMYGAPQSRHRLVIFGCRLGTELPIAPHATHAFQGRTKATKRLPGGLQLLLRPEPGC 494
Query: 590 LEKGVLLSDAISDLP--------LVTNNESEDERK---------------YGTVARTEFQ 626
+GV L DAI DLP +V ++D K G+ A F
Sbjct: 495 AFQGVSLGDAIGDLPAFDWKNPHIVIAASADDREKEAGREKYIPAFLVNPLGSAA--GFA 552
Query: 627 KYIRLRRHDVVNLSSAQMASRPSLLYDH-RPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
K RRH + + +R + R F ER C +P R GA D+P
Sbjct: 553 KAEDYRRHALTSFQRRCRGNRWRVTQQQTRTFGATA--VERACNVPGRPGACHLDVP--- 607
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQ-- 743
+PL K Q + KP+GRL D V V AQ
Sbjct: 608 ---------------------EPLA---LGKQSSQHANKPYGRL--DFAVPAPVLSAQMT 641
Query: 744 --PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
+ +LHP+Q+R LT+RE AR+QGFPD Y+ F P
Sbjct: 642 LSGASGQVLHPTQNRCLTVREAARIQGFPDWYE-FSPT 678
>gi|426201069|gb|EKV50992.1| hypothetical protein AGABI2DRAFT_113733 [Agaricus bisporus var.
bisporus H97]
Length = 1362
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 157/385 (40%), Gaps = 92/385 (23%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
+P PG VD I G PCQ SG N F+ D K+ +L + ++Y +PKYV +ENV
Sbjct: 933 VPRPGSVDLITAGFPCQTHSGLNMFKTAN----DPKSSLMLTALSWVDYYRPKYVYLENV 988
Query: 500 VDILKFS------------GGFLA---RYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRV 544
L+F+ GG + V L+ M YQ R ++ AG YG PQ R+R
Sbjct: 989 AGFLRFNLDTRQAGLHRVEGGVTMGGLKLLVRALLDMRYQVRYSLLQAGHYGTPQRRIRF 1048
Query: 545 FLWGARPFKKLPQYPLPTHEIVARG----VIPNEFQEIIVAYANNQPCQLEKGVLLSDAI 600
FL ++ LP P PTH+ +PN +II V + DAI
Sbjct: 1049 FLIASQSTLPLPNLPQPTHDFPQSHKLFITMPN--GDIIRPIRPGPGTAPHPFVSIEDAI 1106
Query: 601 SDLP------------------------LVTNNES-----EDERKYGTVARTEFQKYIRL 631
DLP LV ++ E ++Y RT++QK
Sbjct: 1107 GDLPKFDWKRPGQTRRPRDDLMRGDIPALVCEHKKSHCGYEGRKEYDCEPRTKYQK--DA 1164
Query: 632 RRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPD-N 690
R + NL H V ERV I + GA++R L PD +
Sbjct: 1165 REKETTNLQ-------------HFTKTVKERKVERVLGISLKPGADYRSL-----RPDMH 1206
Query: 691 KVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI-- 748
+ +W + ++ +P +GRL D T+VT P +
Sbjct: 1207 EWQWANPISSTGRQNFRP---------------GWYGRLDKDSCFPTIVTNIDPMAKQCR 1251
Query: 749 LLHPSQDRVLTIRENARLQGFPDCY 773
+LHPS R++T+RE AR QGFPD +
Sbjct: 1252 VLHPSCKRMVTVRELARAQGFPDWF 1276
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 24/231 (10%)
Query: 110 SVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARW-----FYRAEDTVIK 164
+ DG Y++ D ++E+G I +I+E+ S G + R + ++
Sbjct: 682 AFDGNTYHVFDFVLYRSEQGP-SKIGQIIEIIRSTGGRAPLRLRVKKVGRLWDLVGKIVN 740
Query: 165 DLACLVDRKRVFLSDVEDDNPLNCIVSKAKI-AEVATNMDLEAKQ-KNIPPCDLYYDMKY 222
+ D + VFL+D E P I++K + + + L + N+ P Y ++Y
Sbjct: 741 PTEEIKDERHVFLTDEEAVIPYADIITKCTVFSHESFGQRLSLRNWLNMSPTHFY--LQY 798
Query: 223 TLPHLT--FLNINNESNRRDSDASSTISSETGSN--------SPIGQPEMSLLDLYSGCG 272
P L + + RD S+ + E + + + + M++LDL+ G G
Sbjct: 799 HFPTLQPEAWDEKKRVSFRDLSVCSSCTKEALAKYYDMQTFKTKMQENPMAVLDLFGGAG 858
Query: 273 AMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFL 323
A S GL G+ L A++I+P A K+++ N T+V N+ + L
Sbjct: 859 AFSLGLKEGSEC----LKVTHALEISPSAAKTIRRNCAGTQVINQCVNAVL 905
>gi|23306234|emb|CAD43089.1| DNA methyltransferase 1e [Paracentrotus lividus]
Length = 1335
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 85/152 (55%), Gaps = 7/152 (4%)
Query: 423 CKEKLKEFVTKGYRSN----ILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQ 478
C E L+ V +G +++ LP GDV+ +CGGPPCQG SG NRF + + + KN
Sbjct: 1184 CNELLR-LVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYS--KFKNSL 1240
Query: 479 LLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLP 538
+ ++ +Y +P++ L+ENV + + + + + A+ L+ M YQ GI+ AG YG+P
Sbjct: 1241 ISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGVP 1300
Query: 539 QFRLRVFLWGARPFKKLPQYPLPTHEIVARGV 570
Q R R + A P +KLP YP P H R
Sbjct: 1301 QTRRRAIILAAAPGEKLPFYPEPLHVFSTRAC 1332
>gi|357516637|ref|XP_003628607.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355522629|gb|AET03083.1| Cytosine-specific methyltransferase [Medicago truncatula]
Length = 171
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 87/153 (56%), Gaps = 35/153 (22%)
Query: 138 VELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAE 197
+E+FESVDGE +F+A+W+YRA+DT L+D KRVF S+V+DDNPL+C+V K IA
Sbjct: 49 LEMFESVDGELFFRAQWYYRAKDT-------LIDPKRVFYSEVQDDNPLDCLVGKLNIAR 101
Query: 198 VATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNINNESNRRDSDASSTISSETGSNSPI 257
+ N +IP + S+ SD SE +N
Sbjct: 102 LELN--------DIP--------------------SETSSIVSSDIEVNGISELNTNIAN 133
Query: 258 GQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLV 290
+PE+ LLDLYSGCGAMSTGLC G LSG K++
Sbjct: 134 TKPELKLLDLYSGCGAMSTGLCQGGILSGSKMM 166
>gi|341868917|gb|AEK98582.1| chromomethyltransferase 2a2 [Vitis amurensis]
Length = 70
Score = 114 bits (284), Expect = 3e-22, Method: Composition-based stats.
Identities = 48/70 (68%), Positives = 63/70 (90%)
Query: 458 VSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGR 517
+SGFNRFRN + LED KN+QL+VFMDV+ YLKP++VLMENVV+I+KF+GG+L RYA+GR
Sbjct: 1 ISGFNRFRNKENPLEDPKNKQLVVFMDVVNYLKPRFVLMENVVNIVKFAGGYLGRYALGR 60
Query: 518 LVSMDYQTRL 527
L+ M+YQTR+
Sbjct: 61 LIGMNYQTRM 70
>gi|67970373|dbj|BAE01529.1| unnamed protein product [Macaca fascicularis]
Length = 493
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 94/192 (48%), Gaps = 12/192 (6%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 302 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 359
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 360 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 419
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 420 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 475
Query: 606 VTNNESEDERKY 617
V N S E Y
Sbjct: 476 VRNGASALEISY 487
>gi|109638476|ref|YP_656741.1| ORF86 [Ranid herpesvirus 1]
gi|4219046|gb|AAD12284.1| ORF86 [Ranid herpesvirus 1]
Length = 739
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 169/384 (44%), Gaps = 60/384 (15%)
Query: 427 LKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVI 486
L G S+ P G+V+ + GGPPCQG S NRF P A KN + +++ +
Sbjct: 332 LHALQESGTMSHPWPAVGEVECMVGGPPCQGYSILNRF--PHAHSTKAKNTLVNLYIALA 389
Query: 487 EYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFL 546
Y KP ++MENV ++ + G + V L Y L I+ AG YG+PQ R RV +
Sbjct: 390 LYYKPAVLIMENVRNLTAYKKGRVLCGVVEMLRGGGYDVMLNILQAGHYGVPQTRQRVIV 449
Query: 547 WGARPFKKLPQYPLPT-HEIVARG------VIPNEFQEIIVAYANNQPCQLE--KGVLLS 597
P LP+ P P H + + P+ + P + + L+
Sbjct: 450 VATLP-NALPEGPPPALHAFSHKACNLTLPMSPHGAGRSMRYLCGPNPSAAAPFRTITLA 508
Query: 598 DAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPF 657
+A S L VT + Y R + A+ P ++ R F
Sbjct: 509 EAFSGLAEVTTSPCPSG---------PMSWYAR---------AIAKSEGAPC-FHESRSF 549
Query: 658 QVNNDDYERVCCIPKRKGANFRDLPG-VLVGPD-----NKVRW-DPSMERVM-------- 702
+ N+ ER+ +P GA++RD+P PD +K+R+ D + V
Sbjct: 550 EWINN--ERIASVPAVPGADWRDIPNEERTSPDGTVTLSKLRYIDEKLGIVCPCQLDKTA 607
Query: 703 --LKSGKPLVPDYAMKFEHQSSTKP-----FGRLWWDEIVNTVVTRAQPHNRI--LLHPS 753
+K GK LVP + H++S+K +GR ++TV+T P N+ +LHP
Sbjct: 608 PHVKHGKTLVPWW---LPHKASSKNGYAGLYGRNDMSGFLSTVLTNPMPGNKQGRVLHPR 664
Query: 754 QDRVLTIRENARLQGFPDCYQLFG 777
Q RVL+ RE+AR QGFPD Y L G
Sbjct: 665 QPRVLSARESARGQGFPDSYVLKG 688
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Query: 262 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH 309
+ +D++SGCG +S GLC A L V RWAID P A +LK NH
Sbjct: 276 LHTMDVFSGCGGLSLGLC-DAGLCDV----RWAIDNWPVALDALKANH 318
>gi|242217704|ref|XP_002474649.1| predicted protein [Postia placenta Mad-698-R]
gi|220726179|gb|EED80137.1| predicted protein [Postia placenta Mad-698-R]
Length = 1157
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 161/374 (43%), Gaps = 65/374 (17%)
Query: 441 PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVV 500
P PG +D I G PCQ S N F+ +D K+ +L + + +L+P++ L ENV
Sbjct: 767 PTPGQIDCIIAGFPCQPHSQLNMFQR----ADDRKSHLILNLLSWVNFLQPRFCLFENVR 822
Query: 501 DILKFS------------GGFLA---RYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVF 545
L ++ GG ++ V L++M+YQ R ++ A YG PQ R+R F
Sbjct: 823 GFLSYNLNATQAGRYRVEGGIKMGGLKFLVHSLLAMNYQVRFALLQAAHYGTPQSRIRFF 882
Query: 546 LWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKG------VLLSDA 599
L AR LP +P PTH+ + + EF +A +P + G V + DA
Sbjct: 883 LIAARSGHPLPAFPQPTHDFPLKDSLKLEFTNKGIA----RPIWTQNGTVPHNYVSVDDA 938
Query: 600 ISDLP---------LVTNNESEDERKYGTVARTEFQKYIR----LRRHDVVNLSSAQMAS 646
ISDLP L N+ +D VA + Y R L + +S Q+
Sbjct: 939 ISDLPRFHWSNPRKLFKNHPQQDNDGIPEVACDASRSYCRPPGALDSYHTPPKTSFQVKC 998
Query: 647 RPSLLYDHRPFQ--VNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLK 704
R D + F + ERV IP + A+++ L P M +
Sbjct: 999 RQRKPTDLQQFTRVFKEETVERVVNIPLQPKADYKSL-------------HPDMWEWLFA 1045
Query: 705 SGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR--ILLHPSQDRVLTIRE 762
+ P A + S +GR+ T VT+ +P + +L+P R++T+RE
Sbjct: 1046 N-----PASATARDGFHSGL-YGRIDASRWFQTTVTKVEPTAKQSWVLNPYCKRMVTVRE 1099
Query: 763 NARLQGFPDCYQLF 776
AR QGFPD ++ +
Sbjct: 1100 LARSQGFPDHFRFY 1113
>gi|170088424|ref|XP_001875435.1| C5-DNA-methyltransferase [Laccaria bicolor S238N-H82]
gi|164650635|gb|EDR14876.1| C5-DNA-methyltransferase [Laccaria bicolor S238N-H82]
Length = 1309
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 152/392 (38%), Gaps = 102/392 (26%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VDFI GGPPCQ S N R DI++ + +EY P Y L+ENV +L
Sbjct: 901 VDFIFGGPPCQSFSLANHHRKK----NDIRSTLPCSMLSYVEYYNPDYFLLENVRGLLSH 956
Query: 506 S----------GGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ + ++ +++ YQ ++ A YG PQ R RV WGA+ L
Sbjct: 957 TLQDGRTNTVVQAGMVKFICRTSLALGYQIHYKLLQASHYGTPQGRSRVIFWGAKQGLVL 1016
Query: 556 PQYPLPTHEIVAR---------GVIPNEFQEIIVA-YANNQPCQLEKGVLLSDAISDLP- 604
PQ+PLP+H R G IP + I Y P K +L+ DAI DLP
Sbjct: 1017 PQFPLPSHAFEGRLACPSLPTGGHIPPPSRSKISGDYHQYAPL---KPILVDDAIGDLPP 1073
Query: 605 ---------LVTNNESEDERK--------------------------------YGTVART 623
+ + +D+R+ Y + +
Sbjct: 1074 FEWTNPHQVIPRTSSQKDKRRSLKTPIPQFDAVLLQGNKGTIFSNPGFPEGVPYMSGPQN 1133
Query: 624 EFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPG 683
+QK++R D + + S + DH + + E +P R A+ + LP
Sbjct: 1134 RYQKWLRQGMVD-------EESDTESEVQDHFTSRFSAFLIEASVTVPLRPYADHKALPT 1186
Query: 684 VLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQ 743
L P YAM Q +GR+ D +TRA
Sbjct: 1187 EL------------------------QPTYAMAGRKQWKHSFYGRMDGDGQFKCTMTRAS 1222
Query: 744 PH--NRILLHPSQDRVLTIRENARLQGFPDCY 773
P+ N LLHP Q R+++IRE AR QGFPD +
Sbjct: 1223 PNLKNSWLLHPHQKRMISIRECARSQGFPDGF 1254
>gi|4704471|gb|AAD28102.1| cytosine DNA methyltransferase [Rattus norvegicus]
Length = 349
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 117/253 (46%), Gaps = 25/253 (9%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 48 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 105
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 106 RNFVSFRRSMVLKLTLRCLVRMGYQCIFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 165
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
P H R V +F I ++ + + + D +SDLP + N S
Sbjct: 166 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITMRDTMSDLPEIQNGASAP 221
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E Y K+ R V+ +A + P+ P R+ IP
Sbjct: 222 EISY---------KW----RATVLVPEAAARVALPAHPQGPYPQVHERAGGCRMRHIPLS 268
Query: 674 KGANFRDLPGVLV 686
G+++RDLP + V
Sbjct: 269 PGSDWRDLPNIQV 281
>gi|302694677|ref|XP_003037017.1| hypothetical protein SCHCODRAFT_103476 [Schizophyllum commune H4-8]
gi|300110714|gb|EFJ02115.1| hypothetical protein SCHCODRAFT_103476, partial [Schizophyllum
commune H4-8]
Length = 1190
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 151/370 (40%), Gaps = 71/370 (19%)
Query: 443 PGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDI 502
PGD+D + G PCQ S NRFR + D KN + + + +LKPK+V ENV
Sbjct: 791 PGDIDVVVAGFPCQSHSLLNRFRR----IGDKKNNLIWNALSWVGFLKPKFVFFENVPGF 846
Query: 503 LKFS-----------------GGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVF 545
L+++ GG + V L M YQ R +M AG YG PQ R+R F
Sbjct: 847 LQYNLLPRQVSANRLEGGIEKGGL--KLCVRALAEMGYQLRFCLMQAGHYGAPQHRVRFF 904
Query: 546 LWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLE-----------KGV 594
+ A+ LP P PTH+ I +++ + + + N + K V
Sbjct: 905 VVAAKQGVPLPDLPQPTHDFT---TIAKQYERLTLVLSKNTDTTIRPINTQNGVAPFKAV 961
Query: 595 LLSDAISDLPLVTNNESE-----DERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASR-- 647
++DAI DL + D F Y +D V +S Q A+R
Sbjct: 962 TVADAIDDLKRFHWKHPKRPSPNDGAPMVACNSHSFWGYEGADLYDHVETTSFQRAARCK 1021
Query: 648 PSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL--VGPDNKVRWDPSMERVMLKS 705
PS H ++ + ERV IP KG + R LP L P N + +
Sbjct: 1022 PSQNLQHFTRRLPLPNVERVLAIP--KGGDSRHLPRDLHYFTPSNPIS----------AT 1069
Query: 706 GKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIREN 763
G+ T +GRL D + T P + +LH S R++T+RE
Sbjct: 1070 GR-----------GGYKTVYYGRLHPDGFFPAITTNIGPTAKQGRVLHYSCGRIVTVREL 1118
Query: 764 ARLQGFPDCY 773
AR QGFPD +
Sbjct: 1119 ARAQGFPDWF 1128
>gi|182677759|ref|YP_001831905.1| DNA-cytosine methyltransferase [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633642|gb|ACB94416.1| DNA-cytosine methyltransferase [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 488
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 162/359 (45%), Gaps = 68/359 (18%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
G++D + GGPPCQG S + R +++D +N ++ +++ L PK ++ENV +L
Sbjct: 121 GEIDVLLGGPPCQGFSLNSHVR----SVQDPRNYLFRHYVRLLKGLSPKIFVLENVPGML 176
Query: 504 KFSGG-----FLARYAVGRLVSM-DYQTRLGIMAAGSYGLPQFRLRVFLWGARP----FK 553
GG FL ++ V Y+ R I+ A YG+PQ R RV + G R
Sbjct: 177 SLEGGHFFEEFLREVSLSTTVDCPGYEVRFKILNAAHYGVPQERFRVVVVGTRKDVADRA 236
Query: 554 KLPQYPLPTHEIVA----RGVIPNEFQEII-------VAYANNQPCQLEKGVLLSDAISD 602
+ P+P H +A +G + F I ++ QLE V + DAI D
Sbjct: 237 GVVSLPIPHHFSLAQAHFKGGRTHTFHYAIGRGKHPSTDQISHIGPQLEPFVTVIDAIGD 296
Query: 603 LPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQ--MASRPSLLYDHRPFQVN 660
LP +TN E+ +YG + K D LS Q M S LL +H +
Sbjct: 297 LPKLTNGGGENVGRYG------YNK-------DAPQLSKYQQNMRSDGELLANHWCRALY 343
Query: 661 NDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQ 720
+ ER+ IP G ++R +P L+ P M+R + K
Sbjct: 344 PPNTERIKHIP--AGGDWRSIPRDLL--------PPGMQRALRK---------------- 377
Query: 721 SSTKPFGRLWWDEIVNTVVTRAQPHNRILLH--PSQDRVLTIRENARLQGFPDCYQLFG 777
TK +GRL ++ T++T+ PH +H +Q R++++RE AR+Q FPD + +G
Sbjct: 378 DHTKRYGRLSPTQLAGTLLTKPDPHWGTFIHYDLAQQRLISVREAARIQSFPDRHVFYG 436
>gi|448677074|ref|ZP_21688568.1| MHphi(C) [Haloarcula argentinensis DSM 12282]
gi|445774722|gb|EMA25737.1| MHphi(C) [Haloarcula argentinensis DSM 12282]
Length = 379
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 153/335 (45%), Gaps = 74/335 (22%)
Query: 445 DVDFICGGPPCQGVSGFN-RFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
+VD + GGPPC+G S N R + + L ++ R F+++++ + P+ VL+ENV +L
Sbjct: 79 NVDLVIGGPPCRGFSMANVRSDSAEHPLNELPAR----FLEIVQEINPEAVLIENVPRLL 134
Query: 504 KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
+ G + RL M Y T G++ A +G+PQ R RVF G + + P+ LPT
Sbjct: 135 TIADGKFKESIIARLEEMGYSTTHGVLEAEKFGVPQKRRRVFFIGHKSVE--PE--LPTQ 190
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVART 623
EF + + V + AISDLP + + R + +
Sbjct: 191 ---------GEF-------------KFQMPVTVKQAISDLPELPTGGGGEMRMEYSPNNS 228
Query: 624 EFQKYI-RLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLP 682
+Y+ ++RR++ + S++ +HR + Y R IP +G N+RD+P
Sbjct: 229 GISEYVAKMRRNE-----------KKSIVMNHRTTRNQEKTYRRFKHIP--QGGNWRDIP 275
Query: 683 GVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA 742
+ L+ +Y + Q+ + RL DE TV A
Sbjct: 276 ------------------------EDLMKNYTNR--QQTHDHIYQRLDEDEPAKTV---A 306
Query: 743 QPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
++++HP+Q+R+L++RE ARLQ FPD Y G
Sbjct: 307 NFRKQMIVHPTQNRLLSVREAARLQSFPDDYHFKG 341
>gi|226229344|gb|ACO38710.1| chromomethylase-like protein [Populus balsamifera]
gi|226229346|gb|ACO38711.1| chromomethylase-like protein [Populus balsamifera]
gi|226229348|gb|ACO38712.1| chromomethylase-like protein [Populus balsamifera]
gi|226229350|gb|ACO38713.1| chromomethylase-like protein [Populus balsamifera]
gi|226229352|gb|ACO38714.1| chromomethylase-like protein [Populus balsamifera]
gi|226229354|gb|ACO38715.1| chromomethylase-like protein [Populus balsamifera]
gi|226229356|gb|ACO38716.1| chromomethylase-like protein [Populus balsamifera]
gi|226229358|gb|ACO38717.1| chromomethylase-like protein [Populus balsamifera]
gi|226229360|gb|ACO38718.1| chromomethylase-like protein [Populus balsamifera]
gi|226229362|gb|ACO38719.1| chromomethylase-like protein [Populus balsamifera]
gi|226229364|gb|ACO38720.1| chromomethylase-like protein [Populus balsamifera]
gi|226229366|gb|ACO38721.1| chromomethylase-like protein [Populus balsamifera]
gi|226229368|gb|ACO38722.1| chromomethylase-like protein [Populus balsamifera]
gi|226229370|gb|ACO38723.1| chromomethylase-like protein [Populus balsamifera]
gi|226229372|gb|ACO38724.1| chromomethylase-like protein [Populus balsamifera]
gi|226229374|gb|ACO38725.1| chromomethylase-like protein [Populus balsamifera]
gi|226229376|gb|ACO38726.1| chromomethylase-like protein [Populus balsamifera]
gi|226229378|gb|ACO38727.1| chromomethylase-like protein [Populus balsamifera]
gi|226229380|gb|ACO38728.1| chromomethylase-like protein [Populus balsamifera]
gi|226229382|gb|ACO38729.1| chromomethylase-like protein [Populus balsamifera]
gi|226229384|gb|ACO38730.1| chromomethylase-like protein [Populus balsamifera]
gi|226229386|gb|ACO38731.1| chromomethylase-like protein [Populus balsamifera]
gi|226229388|gb|ACO38732.1| chromomethylase-like protein [Populus balsamifera]
gi|226229390|gb|ACO38733.1| chromomethylase-like protein [Populus balsamifera]
gi|226229392|gb|ACO38734.1| chromomethylase-like protein [Populus balsamifera]
gi|226229394|gb|ACO38735.1| chromomethylase-like protein [Populus balsamifera]
gi|226229396|gb|ACO38736.1| chromomethylase-like protein [Populus balsamifera]
gi|226229398|gb|ACO38737.1| chromomethylase-like protein [Populus balsamifera]
gi|226229400|gb|ACO38738.1| chromomethylase-like protein [Populus balsamifera]
gi|226229402|gb|ACO38739.1| chromomethylase-like protein [Populus balsamifera]
gi|226229404|gb|ACO38740.1| chromomethylase-like protein [Populus balsamifera]
gi|226229406|gb|ACO38741.1| chromomethylase-like protein [Populus balsamifera]
gi|226229408|gb|ACO38742.1| chromomethylase-like protein [Populus balsamifera]
gi|226229410|gb|ACO38743.1| chromomethylase-like protein [Populus balsamifera]
gi|226229412|gb|ACO38744.1| chromomethylase-like protein [Populus balsamifera]
gi|226229414|gb|ACO38745.1| chromomethylase-like protein [Populus balsamifera]
gi|226229416|gb|ACO38746.1| chromomethylase-like protein [Populus balsamifera]
gi|226229418|gb|ACO38747.1| chromomethylase-like protein [Populus balsamifera]
gi|226229420|gb|ACO38748.1| chromomethylase-like protein [Populus balsamifera]
gi|226229422|gb|ACO38749.1| chromomethylase-like protein [Populus balsamifera]
gi|226229424|gb|ACO38750.1| chromomethylase-like protein [Populus balsamifera]
gi|226229426|gb|ACO38751.1| chromomethylase-like protein [Populus balsamifera]
gi|226229428|gb|ACO38752.1| chromomethylase-like protein [Populus balsamifera]
gi|226229430|gb|ACO38753.1| chromomethylase-like protein [Populus balsamifera]
gi|226229432|gb|ACO38754.1| chromomethylase-like protein [Populus balsamifera]
gi|226229434|gb|ACO38755.1| chromomethylase-like protein [Populus balsamifera]
gi|226229436|gb|ACO38756.1| chromomethylase-like protein [Populus balsamifera]
gi|226229438|gb|ACO38757.1| chromomethylase-like protein [Populus balsamifera]
gi|226229440|gb|ACO38758.1| chromomethylase-like protein [Populus balsamifera]
gi|226229442|gb|ACO38759.1| chromomethylase-like protein [Populus balsamifera]
gi|226229444|gb|ACO38760.1| chromomethylase-like protein [Populus balsamifera]
gi|226229446|gb|ACO38761.1| chromomethylase-like protein [Populus balsamifera]
gi|226229448|gb|ACO38762.1| chromomethylase-like protein [Populus balsamifera]
gi|226229450|gb|ACO38763.1| chromomethylase-like protein [Populus balsamifera]
gi|226229452|gb|ACO38764.1| chromomethylase-like protein [Populus balsamifera]
gi|226229454|gb|ACO38765.1| chromomethylase-like protein [Populus balsamifera]
gi|226229456|gb|ACO38766.1| chromomethylase-like protein [Populus balsamifera]
gi|226229458|gb|ACO38767.1| chromomethylase-like protein [Populus balsamifera]
gi|226229460|gb|ACO38768.1| chromomethylase-like protein [Populus balsamifera]
gi|226229462|gb|ACO38769.1| chromomethylase-like protein [Populus balsamifera]
gi|226229464|gb|ACO38770.1| chromomethylase-like protein [Populus balsamifera]
gi|226229466|gb|ACO38771.1| chromomethylase-like protein [Populus balsamifera]
gi|226229468|gb|ACO38772.1| chromomethylase-like protein [Populus balsamifera]
gi|226229470|gb|ACO38773.1| chromomethylase-like protein [Populus balsamifera]
gi|226229472|gb|ACO38774.1| chromomethylase-like protein [Populus balsamifera]
gi|226229474|gb|ACO38775.1| chromomethylase-like protein [Populus balsamifera]
gi|226229476|gb|ACO38776.1| chromomethylase-like protein [Populus balsamifera]
gi|226229478|gb|ACO38777.1| chromomethylase-like protein [Populus balsamifera]
gi|226229480|gb|ACO38778.1| chromomethylase-like protein [Populus balsamifera]
gi|226229482|gb|ACO38779.1| chromomethylase-like protein [Populus balsamifera]
gi|226229484|gb|ACO38780.1| chromomethylase-like protein [Populus balsamifera]
gi|226229486|gb|ACO38781.1| chromomethylase-like protein [Populus balsamifera]
gi|226229488|gb|ACO38782.1| chromomethylase-like protein [Populus balsamifera]
gi|226229490|gb|ACO38783.1| chromomethylase-like protein [Populus balsamifera]
gi|226229492|gb|ACO38784.1| chromomethylase-like protein [Populus balsamifera]
gi|226229494|gb|ACO38785.1| chromomethylase-like protein [Populus balsamifera]
gi|226229496|gb|ACO38786.1| chromomethylase-like protein [Populus balsamifera]
gi|226229498|gb|ACO38787.1| chromomethylase-like protein [Populus balsamifera]
gi|226229500|gb|ACO38788.1| chromomethylase-like protein [Populus balsamifera]
gi|226229502|gb|ACO38789.1| chromomethylase-like protein [Populus balsamifera]
gi|226229504|gb|ACO38790.1| chromomethylase-like protein [Populus balsamifera]
gi|226229506|gb|ACO38791.1| chromomethylase-like protein [Populus balsamifera]
gi|226229508|gb|ACO38792.1| chromomethylase-like protein [Populus balsamifera]
gi|226229510|gb|ACO38793.1| chromomethylase-like protein [Populus balsamifera]
gi|226229512|gb|ACO38794.1| chromomethylase-like protein [Populus balsamifera]
gi|226229514|gb|ACO38795.1| chromomethylase-like protein [Populus balsamifera]
Length = 79
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/74 (68%), Positives = 59/74 (79%)
Query: 650 LLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL 709
LL+DHRP ++N+DDY+RVC IPKRKG NFRDLPGV V PD KV WDP + R L SGKPL
Sbjct: 6 LLFDHRPLELNDDDYQRVCQIPKRKGGNFRDLPGVRVRPDKKVEWDPEVPRQYLSSGKPL 65
Query: 710 VPDYAMKFEHQSST 723
VPDYAM F + SS+
Sbjct: 66 VPDYAMTFVNGSSS 79
>gi|390441689|ref|ZP_10229729.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis sp. T1-4]
gi|389835002|emb|CCI33855.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis sp. T1-4]
Length = 381
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 144/336 (42%), Gaps = 68/336 (20%)
Query: 449 ICGGPPCQGVSGFNRFRNPQAA---LEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+ GGPPCQG S RN A L D +N F+ ++ +P +V+MENV +ILK
Sbjct: 76 LIGGPPCQGFS-----RNIPAGYRYLNDSRNHLYKSFLGFVQEFRPLHVVMENVPEILKA 130
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH-- 563
GG + V L S YQ + A YG+PQ R R F + ++LP P TH
Sbjct: 131 YGGIIRDEIVAHLESWGYQVVTTSLNAAYYGVPQTRSRAFFLAS--LERLPSLPQATHSG 188
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVART 623
+I + + ++ V N P K DAISDLP + ++ D Y T
Sbjct: 189 DIRSDYKAVKSWTQLTVLEPNIAPVTTVK-----DAISDLPTLEAGQAYDHEIYTREPET 243
Query: 624 EFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPG 683
+Q+ +R + +VN + + P Q++ RV + +G + RDLP
Sbjct: 244 IYQQKMREQSQKIVNHIARALT----------PIQMS-----RVQILA--EGQDARDLPA 286
Query: 684 VLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-- 741
L P +H S +GRL WD+ T +TR
Sbjct: 287 ------------------------ELAPK-----KHYSGA--YGRLSWDKPART-ITRWF 314
Query: 742 AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + HP+Q+R +TIRE ARL +PD + G
Sbjct: 315 FHPGSGRFFHPTQNRTITIREAARLHSYPDHFHFLG 350
>gi|392571000|gb|EIW64172.1| S-adenosyl-L-methionine-dependent methyltransferase [Trametes
versicolor FP-101664 SS1]
Length = 1239
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 158/386 (40%), Gaps = 81/386 (20%)
Query: 441 PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVV 500
P PGD+D I G PCQ S N F+ D K +L + +++L+PKY ENV
Sbjct: 831 PCPGDIDCIVAGFPCQPHSQLNMFKK----ANDRKTNLILNLLSWVDFLRPKYCFFENVR 886
Query: 501 DIL------------KFSGGFLA---RYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVF 545
L + GG ++ L++M YQ R G++ AG YG PQ R+R F
Sbjct: 887 GFLSSTLHARQASKYRVEGGIKMGGLKFLTRSLLAMGYQVRFGLLQAGHYGTPQARVRFF 946
Query: 546 LWGARPFKKLPQYPLPTHEIVARGVIPNEFQ------EIIVAYANNQPCQLEKGVLLSDA 599
L A+ LP+ P PTH+ + + +F I+ P K V +A
Sbjct: 947 LVAAQIGYPLPKLPQPTHDFPLQDGLEIKFSPDLPPIRPILTANGTAPF---KFVSTKEA 1003
Query: 600 ISDLPLVT-NNESEDERKYGTVARTEF----------------------QKYIRLRRHDV 636
I DLP+ + + R GT E + + R
Sbjct: 1004 IEDLPVFDWRDPHKIMRSSGTSHTREGVLTLECDVEQQPRGCGLTGPCPSRSLSYRFDKP 1063
Query: 637 VNLSSAQMASRPSLLYDH----RPFQVNNDDY-ERVCCIPKRKGANFRDLPGVLVGPDNK 691
N A+ SRP+ H P D Y RV IP R GA++R+L N
Sbjct: 1064 RNSFQARCRSRPTRDLQHITRVTPACTRTDIYLNRVVNIPLRAGADYREL--------NA 1115
Query: 692 VRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKP--FGRLWWDEIVNTVVTRAQPHNRI- 748
W+ + P AM + +P +GRL D+ +T VT P +
Sbjct: 1116 RLWE----------WQSAHPTSAMA---RDGFRPGMYGRLDEDKWFHTTVTNVSPTAKQS 1162
Query: 749 -LLHPSQDRVLTIRENARLQGFPDCY 773
++HP+ R+LT+RE AR QGFPD +
Sbjct: 1163 RVIHPTSKRILTVRELARSQGFPDWF 1188
>gi|392567063|gb|EIW60238.1| S-adenosyl-L-methionine-dependent methyltransferase [Trametes
versicolor FP-101664 SS1]
Length = 1101
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 158/387 (40%), Gaps = 74/387 (19%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP PG+VDFI GGPPCQ S N + DI++ + + +EY +P + L+ENV
Sbjct: 678 LPQPGEVDFIYGGPPCQSFSNMNHHKK----ANDIRSTLVCNMISYVEYYRPMFFLLENV 733
Query: 500 VDILKFS-----------GGF---LARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVF 545
V +L + GG + ++ +G L + YQ ++ AG +G PQ R RV
Sbjct: 734 VGMLSYRLGGEQDHNRVVGGIEMGVVKFILGSLTILGYQVHFKVLQAGQHGAPQGRRRVI 793
Query: 546 LWGARPFKKLPQYPLPTHEI---VARGVIPNE--FQEIIVAYA--NNQPCQLEKGVLLSD 598
GA+ LP +PLP H V +P +I A + C V + +
Sbjct: 794 FLGAQRDVPLPAFPLPQHAFPTPVHNVNLPTGEVLHPVIRVGADEDGHQCAPLPPVTVRE 853
Query: 599 AISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMA-SRPSLLYDHRPF 657
AISDL + ++ E I + + + PS Y P+
Sbjct: 854 AISDLVSAKLIDPNSAKRSTPSVLHELGSRIAQGIARFTACAHDETGQAHPSGFYTPVPY 913
Query: 658 ------------QVNNDD--------------YERVCCIPKRKGANFRDLPGVLVGPDNK 691
+ N D ERV IP + A DLP D +
Sbjct: 914 PQPPLSRYQSWLRAGNGDTVQYHYTRWLSKLVVERVVNIPMKPNAGHEDLPL-----DLR 968
Query: 692 VRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--L 749
V + ++GKP K ++S +GR+ + T +T P+ + +
Sbjct: 969 V-----TKLYKTETGKP-------KSVYRSL---YGRIASNGQFVTAMTTIAPNAKGGRV 1013
Query: 750 LHPSQDRVLTIRENARLQGFPDCYQLF 776
+HP Q R+LTIRE AR QGFPD YQ
Sbjct: 1014 IHPDQKRILTIRECARAQGFPDRYQFL 1040
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 40/59 (67%), Gaps = 5/59 (8%)
Query: 265 LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFL 323
L+L++G G +STGL +SG+ + TRWA++ +P A ++ K NHP+T V ++ ++ L
Sbjct: 596 LELFAGAGGLSTGL----DMSGM-VQTRWAVEFSPSAARTYKANHPDTIVYSQCSNKLL 649
>gi|425462210|ref|ZP_18841684.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9808]
gi|389824798|emb|CCI25960.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9808]
Length = 381
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 146/338 (43%), Gaps = 72/338 (21%)
Query: 449 ICGGPPCQGVSGFNRFRNPQAA---LEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+ GGPPCQG S RN A L D +N F+ ++ +P +V+MENV +ILK
Sbjct: 76 LIGGPPCQGFS-----RNIPAGYRYLNDSRNHLYKSFLGFVQEFRPLHVVMENVPEILKA 130
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
GG + V L S YQ + A YG+PQ R R F + +LP P TH
Sbjct: 131 YGGIIRDEIVAHLESWGYQVVTTSLNAAYYGVPQTRSRAFFLAS--LDRLPSLPQATHS- 187
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGV----LLSDAISDLPLVTNNESEDERKYGTVA 621
G I ++++ + + Q LE + + DAISDLP + ++ D Y
Sbjct: 188 ---GDIRSDYKAV---KSWTQLTLLEPNIAPVTTVKDAISDLPTLEAGQAYDHEIYTREP 241
Query: 622 RTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDL 681
T +Q+ +R + +VN + + P Q++ RV + +G + RDL
Sbjct: 242 ETIYQQKMREQSQKIVNHIARALT----------PIQMS-----RVQILA--EGQDARDL 284
Query: 682 PGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR 741
P L P +H S +GRL WD+ T +TR
Sbjct: 285 PA------------------------ELAPK-----KHYSGA--YGRLSWDKPART-ITR 312
Query: 742 --AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + HP+Q+R +TIRE ARL +PD + G
Sbjct: 313 WFFHPGSGRFFHPTQNRTITIREAARLHSYPDHFHFLG 350
>gi|449547195|gb|EMD38163.1| hypothetical protein CERSUDRAFT_122915 [Ceriporiopsis subvermispora
B]
Length = 1081
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 161/394 (40%), Gaps = 88/394 (22%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP PG+VDFI GGPPCQ S N + +DI++ + + +E +P Y L+ENV
Sbjct: 665 LPKPGEVDFIFGGPPCQSFSLMNHSKKA----DDIRSTLVCNMLSWVELYRPSYFLIENV 720
Query: 500 VDIL-----------KFSGGF---LARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVF 545
+ +L GG + ++ V ++ YQ ++ AG YG PQ R R+
Sbjct: 721 IGMLFHPLGGEQSGRSVVGGVKMGMVKFIVRAATALGYQIHFRVLQAGQYGAPQGRRRLI 780
Query: 546 LWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANN-QP---CQLEK--------- 592
GAR LPQ+P P+H P + Q + + QP CQ+++
Sbjct: 781 FIGARRDLPLPQFPAPSHS------FPRKTQCYNLPTGDTLQPITRCQIDEEDDITLEPW 834
Query: 593 ----GVLLSDAISDLPLV--TNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSS----- 641
V + DAI DLP N E + G + ++ + D V S
Sbjct: 835 APLPTVTVMDAIGDLPQFDWINPHIELRKSKGDIREAREREENGIPSFDAVARSCKTLPG 894
Query: 642 ----AQMASRPSLLYDHRPFQVNNDD-------------YERVCCIPKRKGANFRDLPGV 684
A + P Y + ++ ERV IP R A+ DLP V
Sbjct: 895 FTAPAPYSFPPLTRYQTWARETAGEEVEYQYSRTFTHMVVERVANIPFRADADHVDLPRV 954
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQP 744
L P R+ G P + +GR+ + T +T +P
Sbjct: 955 LYVP-----------RMFESEGVP----------KKCYRGIYGRIDGNGHFWTAMTTIKP 993
Query: 745 HNR--ILLHPSQDRVLTIRENARLQGFPDCYQLF 776
+ + +LHP+Q R++T+RE AR QGFPD Y+
Sbjct: 994 NAKGGRVLHPTQKRIITVRECARAQGFPDHYKFL 1027
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 109/253 (43%), Gaps = 25/253 (9%)
Query: 86 YPDRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAY--VKAEEGAVDYIARIVELFES 143
+P KAL +E + + S G Y++ D Y VK+EE + IA IV + E
Sbjct: 394 FPCGLKALRQERSMWKFSEDDGSISQHGVDYHISDFVYLRVKSEEAYLYQIAEIVNI-EP 452
Query: 144 VDGEPYFKARWFYRAEDTVIKDL------ACLVDRKRVFLSDVEDDNPLNCIVSKAKIAE 197
P +A + R D +++DL + D +R+F + + I K +
Sbjct: 453 GGSLPIVEASLYGRY-DLILRDLKGNEAWSLPKDNRRLFATPTITRVEASAIEGKVYVKP 511
Query: 198 VATNMDLEAKQKNIPPCDLYY-DMKYTLPHLT----FLNINNESNRRDSDASSTISSETG 252
T +L+ + + D YY D+ P +T +N++ R SE
Sbjct: 512 CRTKSELD---EWLQADDHYYVDLWAQSPRVTSLKALMNLDYTCTRSCPQCLHAHDSERA 568
Query: 253 SNSPI--GQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP 310
+ + LDL+SG G +STGL S++ T+WA++ +P A S + NHP
Sbjct: 569 EAKRFLNQRGPLRALDLFSGAGGLSTGLNCSDSVN-----TKWAVEFSPSAALSYQANHP 623
Query: 311 ETKVRNEAADDFL 323
+T V N+ + L
Sbjct: 624 DTIVYNQCTNLLL 636
>gi|323650463|gb|ADX97312.1| M.FspI [Fischerella muscicola SAG 1427-1 = PCC 73103]
Length = 385
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 140/341 (41%), Gaps = 78/341 (22%)
Query: 449 ICGGPPCQGVSGFNRFRNPQAA---LEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+ GGPPCQG S RN A L D +N+ F++ +E +P YV+MENV +ILK
Sbjct: 76 LIGGPPCQGFS-----RNIPAGYRYLNDSRNQLYRTFLEFVEEFRPIYVVMENVPEILKA 130
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
G + +L S+ Y+ + A YG+PQ R R F + +P PTH
Sbjct: 131 YNGVIREEITQQLESLSYKVVSSSLNAAHYGIPQTRSRAFFIAS--LDHYLHFPKPTH-- 186
Query: 566 VARGVIPNEFQEIIVAYANNQPCQ----LEKG----VLLSDAISDLPLVTNNESEDERKY 617
F +I Y + C LE V + DAI DLP + + + Y
Sbjct: 187 ---------FGDIRSDYRTRKSCNQLNLLETNVSPLVTVRDAIGDLPPLEAGQKYEAEVY 237
Query: 618 GTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGAN 677
+ +T +Q IR + VVN + + P Q++ RV + +G +
Sbjct: 238 PSAPQTTYQAMIRNQSVKVVNHVARALT----------PIQLS-----RVRLL--TEGQD 280
Query: 678 FRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNT 737
RDLP L + + +GRL+WD+ T
Sbjct: 281 ARDLPTELA-------------------------------PKKYYSGAYGRLYWDKPART 309
Query: 738 VVTRA-QPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ P + HP+QDR +TIRE ARL +PD + G
Sbjct: 310 ITRWVFHPGSGRFFHPTQDRTITIREAARLHSYPDNFHFLG 350
>gi|336367242|gb|EGN95587.1| hypothetical protein SERLA73DRAFT_76683 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1285
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 125/295 (42%), Gaps = 55/295 (18%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
+P PGDVDFI GGPPCQ SG N ++ DI++ + + +E+ +P Y L+ENV
Sbjct: 893 MPKPGDVDFIYGGPPCQSFSGINHWKKAN----DIRSTLICNMLSYVEFYRPSYFLLENV 948
Query: 500 VDILKFS-----------GGF---LARYAVGRLVSMDYQTRLGIMA--AGSYGLPQFRLR 543
IL + G + ++ + L ++ YQ R ++ AG YG PQ R R
Sbjct: 949 TGILNYRLKGRMEGRSTVDGIEMGVVKFILRSLAALGYQIRFNVLQLQAGQYGAPQGRQR 1008
Query: 544 VFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQP-----CQLEKGVLLSD 598
V WGA+ LP+ P+PTH V+R + + + P C + V ++D
Sbjct: 1009 VIFWGAKRGLLLPELPIPTHGFVSRNYKVSTGTRLPRMTRSKDPTDDHLCSPFRAVTIND 1068
Query: 599 AISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPS--------L 650
AI DLP + Y + +R + +K R H ++ + R +
Sbjct: 1069 AIGDLPGF--DWINPHLVYPSTSRDKTEKRTRETEHGILAFDAGYEDRRSQKYPGYSKPM 1126
Query: 651 LYDHRPF--------------------QVNNDDYERVCCIPKRKGANFRDLPGVL 685
Y H+P + + ERV +P + A++ LP L
Sbjct: 1127 SYAHQPMTRYQKWIRGSQKKVKYQYTRRFGDGIIERVINVPLKPNADYHSLPKKL 1181
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 265 LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFL 323
L+L+SG G + TGL +SG + TRWA++ +P A + + NH T V N+ + L
Sbjct: 813 LELFSGAGGLGTGL----DMSGF-VETRWAVEFSPSAAMTYQANHSHTTVYNQCTNVLL 866
>gi|395332104|gb|EJF64483.1| S-adenosyl-L-methionine-dependent methyltransferase [Dichomitus
squalens LYAD-421 SS1]
Length = 1249
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 149/381 (39%), Gaps = 84/381 (22%)
Query: 441 PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVV 500
P PGD+D I G PCQ S N F+ D K+ LL + I+YL+PKY + ENV
Sbjct: 860 PKPGDIDCIVAGFPCQPHSTLNMFQK----ANDRKSHLLLNLLSWIDYLQPKYCVFENVR 915
Query: 501 DILKFS------------GGFLA---RYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVF 545
L ++ GG ++ + L+++ YQ ++ AG YG PQ R+R F
Sbjct: 916 GFLNYNLNASQAGRFRMVGGIKMGGLKFFIHALLTLGYQVHFSLLQAGQYGTPQRRVRFF 975
Query: 546 LWGARPFKKLPQYPLPTHEIVARGVIPNEFQEI--IVAYANNQPCQLEKGVLLSDAISDL 603
L ++ LP +PLPTH ++ + F I + V + DAI DL
Sbjct: 976 LLASQKSYPLPSFPLPTHAVLNPDALSIRFPNGVEINPVPTGDGTAPFRAVCIRDAIDDL 1035
Query: 604 PL----------------VTNNESEDERKY----GTVARTEFQKYIRLRRHDVVNLSSAQ 643
V + E + ++ Y G AR Y + R
Sbjct: 1036 VAFDWKDPGKNGMKPRKGVFSIECDPKKPYCGPPGDYARPPKNSYQKACR---------- 1085
Query: 644 MASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWD-----PSM 698
++P+ H + R+ +P + A++R L PD W +
Sbjct: 1086 --TKPTTQLQHYTRAFKHAVVSRITNVPLKSRADYRFL------PDEHSEWQFRNPASAT 1137
Query: 699 ERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR--ILLHPSQDR 756
R+ K G +GRL E +T VT P + +LHP R
Sbjct: 1138 ARLGFKPGM------------------YGRLDEKEWFHTTVTNVDPTAKQSYVLHPKYRR 1179
Query: 757 VLTIRENARLQGFPDCYQLFG 777
+ TIRE AR QGFPD +
Sbjct: 1180 IFTIRELARSQGFPDWFTFIA 1200
>gi|290968468|ref|ZP_06560007.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1
str. 28L]
gi|290781464|gb|EFD94053.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1
str. 28L]
Length = 699
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 137/333 (41%), Gaps = 82/333 (24%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
V+ I GGPPCQG S + + L+D +N + ++ +++ LKP ++ENV ++
Sbjct: 408 VNMIIGGPPCQGFS----LKGKKLGLDDPRNFLFIEYLHLVQELKPLVFVIENVKSLMST 463
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
S G+ + + + Y+ +GI+ A YG+PQ R RV ++ K P PT
Sbjct: 464 SNGWFKNQIISEIKKLGYEVSVGIVRASDYGVPQNRERVIFLCSK--NKAISLPEPT--- 518
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
++K + DAI DL + +NE + E+ Y T A+TE+
Sbjct: 519 ------------------------VKKTTTVRDAIEDLAYLNSNEGDFEQSYITEAKTEY 554
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
QK +R LY+H+ + ++ IP KG + LP L
Sbjct: 555 QKLMR---------------KDSDRLYNHKASNHSEIAIHKLSMIPPEKGKEY--LPENL 597
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQ-P 744
+G Q +GRL WDE T+ TR
Sbjct: 598 LGK-------------------------------QKFNSTWGRLKWDEPSPTIDTRFDAA 626
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
N HP +R +T+RE AR+Q F D + +G
Sbjct: 627 SNGTNNHPFLNRSITLREAARIQSFDDRFIFYG 659
>gi|299753284|ref|XP_001833175.2| hypothetical protein CC1G_01237 [Coprinopsis cinerea okayama7#130]
gi|298410229|gb|EAU88864.2| hypothetical protein CC1G_01237 [Coprinopsis cinerea okayama7#130]
Length = 1253
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 153/377 (40%), Gaps = 58/377 (15%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
++DFI GGPPCQG S N R DI+ + + E+ P Y L+ENV +L
Sbjct: 830 NIDFILGGPPCQGFSRANHTRKEN----DIRTTMPVNMLSYAEHYDPTYFLLENVTGLLD 885
Query: 505 F---------SGGFLAR----YAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
F +G + R + V L+++ YQ ++ A YG+PQ R R+ +W A+
Sbjct: 886 FKLRDHRLGSNGEIIERGMLKFIVRALIALGYQVHWNVLQAAQYGVPQSRNRLIIWAAKR 945
Query: 552 FKKLPQYPLPTHEI------------------VARGVIPNEFQEIIVAYANNQPCQLEKG 593
LP++P+PTH V+R +IP+E + C
Sbjct: 946 GATLPKFPVPTHAFEGNGHRPKILGSASSLPNVSRALIPDE-------HGRYHQCAPFLP 998
Query: 594 VLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYI--RLRRHDVVNLSSAQMASRPSLL 651
+ + DAI+DLP + + Y + T + + ++ + D V+L+ + +
Sbjct: 999 ISIFDAIADLPAFEWSNPYLIQPYPAMQDTTHRLWFGKKIPQLDAVSLTGKEGVDDTPVG 1058
Query: 652 Y----------DHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERV 701
Y +Q + R + +G R LV V +
Sbjct: 1059 YYSTLGSYAIPPMNRYQQWLREGMRTSQTRRVQGQYTRTFQAHLVESTTTVPLKANATHK 1118
Query: 702 MLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQP--HNRILLHPSQDRVLT 759
L L P A+ E Q + +GRL +T+ P N LHP Q RV +
Sbjct: 1119 DLPLS--LRPKMALPGEKQENNCFYGRLDGSAHFKCAMTQFSPTMKNSWPLHPLQKRVYS 1176
Query: 760 IRENARLQGFPDCYQLF 776
+RE AR QGFPD Y +
Sbjct: 1177 VRELARAQGFPDSYNFY 1193
>gi|422024086|ref|ZP_16370586.1| cytosine-specific methyltransferase [Providencia sneebia DSM 19967]
gi|414091279|gb|EKT52966.1| cytosine-specific methyltransferase [Providencia sneebia DSM 19967]
Length = 353
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 143/333 (42%), Gaps = 79/333 (23%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQG+S P+ LED +N+ L F+ ++ L PKYVL+ENV I+
Sbjct: 70 IDVVIGGPPCQGLS----LSGPRK-LEDPRNQLYLSFIRIVSLLNPKYVLIENVPGIISL 124
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
G + + L ++ Y ++ A YG+PQ R RVF G + +K +PLPTH+
Sbjct: 125 FKGKIKDEIIKSLETLGYTVNFQVLKASEYGVPQHRRRVFFIGTKAMEKF-DFPLPTHK- 182
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
E +++I +K + DA+ DLP++ N E ++Y + +
Sbjct: 183 --------EQEDLI----------FKKMISTYDALHDLPVLENELGETIQEYALPIQNAY 224
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
Q+ +R V+N +A + + E + +P G N++ LP L
Sbjct: 225 QELMRFNSSHVLNHIAANHSEKVK---------------ETIKLVP--PGKNYKALPEEL 267
Query: 686 VGPDN-KVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQP 744
N V W PD+A P T+ T +
Sbjct: 268 KNSRNFNVAWT-------------RFPDHA--------PSP-----------TIDTGHRH 295
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
H H +RV T+RE ARLQ FPD ++ G
Sbjct: 296 H----FHYYANRVPTVRECARLQSFPDRFEFIG 324
>gi|241997518|ref|XP_002433408.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
gi|215490831|gb|EEC00472.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
Length = 414
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 125/268 (46%), Gaps = 29/268 (10%)
Query: 423 CKEKLKEFVTKGYRSNI----LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQ 478
C LKE V +G +N P G+VDF+CGGPPCQG S NR R + +KN
Sbjct: 55 CNSFLKE-VLEGQETNAKGQRFPKKGEVDFLCGGPPCQGYSLLNRHRGNWNS--RLKNSL 111
Query: 479 LLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLP 538
+ + + +Y +P++ LMENV + G + + + L+ + YQ G++ AGSYGLP
Sbjct: 112 VSTLLSLCDYYRPRFFLMENVKSFISEEKGLVMQLTLQSLLRLGYQCCFGVLQAGSYGLP 171
Query: 539 QFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEI--IVAYANNQPCQLEKGVLL 596
Q R R+ + A P + LP++P P + + + ++ + + P + V L
Sbjct: 172 QDRKRLVILAAAPGELLPKFPEPKTSFPSNNFVTVKGKKFGPTTTWCTSAPL---RTVTL 228
Query: 597 SDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRP 656
DAISDL + ++S Y R+ + D SR + DH P
Sbjct: 229 RDAISDLASLEPSDSASSFS------EPMSCYQRMLKGD----------SR-GPIRDHVP 271
Query: 657 FQVNNDDYERVCCIPKRKGANFRDLPGV 684
+ RV IPK AN+R LP +
Sbjct: 272 KLLTPLVQARVDHIPKVPRANWRSLPNI 299
>gi|425441645|ref|ZP_18821915.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9717]
gi|389717574|emb|CCH98349.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9717]
Length = 381
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 146/338 (43%), Gaps = 72/338 (21%)
Query: 449 ICGGPPCQGVSGFNRFRNPQAA---LEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+ GGPPCQG S RN A L D +N F+ ++ +P +V+MENV +ILK
Sbjct: 76 LIGGPPCQGFS-----RNIPAGYRYLNDSRNHLYKSFLGFVQEFRPLHVVMENVPEILKA 130
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
G + V L S YQ + A YG+PQ R R F + ++LP P TH
Sbjct: 131 YNGIIRDEIVAHLESWGYQVVTTSLNAAYYGVPQTRSRAFFLAS--LERLPSLPQATHS- 187
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGV----LLSDAISDLPLVTNNESEDERKYGTVA 621
G I ++++ + + Q LE + + DAISDLP + ++ D Y
Sbjct: 188 ---GDIRSDYKAV---KSWTQLTLLEPNIAPVTTVKDAISDLPTLEAGQAYDHEIYTREP 241
Query: 622 RTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDL 681
T +Q+ +R + +VN + + P Q++ RV + +G + RDL
Sbjct: 242 ETIYQQKMREQSQKIVNHIARALT----------PIQMS-----RVQILA--EGQDARDL 284
Query: 682 PGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR 741
P L P +H S +GRL WD+ T +TR
Sbjct: 285 PA------------------------ELAPK-----KHYSGA--YGRLSWDKPART-ITR 312
Query: 742 --AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + HP+Q+R +TIRE ARL +PD + G
Sbjct: 313 WFFHPGSGRFFHPTQNRTITIREAARLHSYPDHFHFLG 350
>gi|389748984|gb|EIM90161.1| S-adenosyl-L-methionine-dependent methyltransferase [Stereum hirsutum
FP-91666 SS1]
Length = 1151
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 153/381 (40%), Gaps = 90/381 (23%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
D+D I G PCQ S N F+ D K+ +LV + ++ KPKY L ENV L+
Sbjct: 758 DIDVILAGFPCQPHSRLNMFQKAN----DSKSNLILVLLSYVDLFKPKYCLFENVRGFLQ 813
Query: 505 FS-----------------GGF-LARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFL 546
F+ GG +YA +++MDYQ R+ ++ G YGLPQ R+R F+
Sbjct: 814 FNLNATQKDQYSVEGGIDMGGIKFLQYA---MLTMDYQVRIMLLQGGHYGLPQTRIRFFM 870
Query: 547 WGARPFKKLPQYPLPTHEIVARGVIPNEFQE--IIVAYANNQPCQLEKGVLLSDAISDL- 603
A+ LP+ P PTH+ A + +F +I N + + DAI DL
Sbjct: 871 VAAKRGYHLPEVPQPTHQFPANDGLEIKFTNGMVIRPVQTNGRSAPFRSTTIEDAIGDLP 930
Query: 604 -------------PLVTNNESEDER-------KYGTVARTEFQKYIRLRRHDVVNLSSAQ 643
PL + EDE G V T +Y R +S Q
Sbjct: 931 RFDWKNPQKLEKTPLPGTRQREDEVLTLDCDPDKGFVGLTGRMEYFSPPR------TSFQ 984
Query: 644 MA--SRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWD------ 695
RP+ H +N ERV IP A++R +N W+
Sbjct: 985 FKCRERPTSNLQHINRVLNEGTVERVRNIPLEPRADYR-------SEENPKLWEWQFSDR 1037
Query: 696 -PSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHP 752
S+ + + G +GRL D T VT +P + +LHP
Sbjct: 1038 ASSIAKKGFRGGL------------------YGRLNKDGFFQTTVTNVEPTAKQSRVLHP 1079
Query: 753 SQDRVLTIRENARLQGFPDCY 773
R+LT+RE AR QGFPD +
Sbjct: 1080 WCHRILTVRELARSQGFPDWF 1100
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 260 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 319
P + LD+++G GA G+ G+K+ AI+I+P A K+LK N P V N+ A
Sbjct: 663 PTLRALDVFAGVGAFGLGM---EEAGGIKVTH--AIEISPSAAKTLKLNAPNVTVYNQDA 717
Query: 320 DDFL 323
+ L
Sbjct: 718 NLVL 721
>gi|411012957|gb|AFV99135.1| CMT-type cytosine DNA-methyltransferase 3a [Malus x domestica]
Length = 372
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 121/278 (43%), Gaps = 76/278 (27%)
Query: 72 FVSPPVSADEALKRYPDRYKALNEEEEVLQARC--HYTQA-------------------- 109
F P+ +E K+YP RY N + C ++T +
Sbjct: 120 FSGKPMEDEETRKQYPKRYVGENYALLAISCECSMYFTGSRKERKKCYERTITKSIALCF 179
Query: 110 SVDGCLYNLGDDAYVKA---EEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDL 166
D C+ G + + K E YI +IVE+FE++ G YF A+W+YR++DTVIK
Sbjct: 180 DFDPCIGAEGKEEWAKKLQRGETKEPYICKIVEMFEAIGGLLYFTAQWYYRSQDTVIKHC 239
Query: 167 ACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPH 226
A + ++D + K K+IP C+ Y D KY LP+
Sbjct: 240 ASVA----------------------------CGHVDQDVKSKSIPVCNYYCDTKYLLPY 271
Query: 227 LTFLNINN---------------ESNRRDSDASST----ISSETGS---NSPIGQPEMSL 264
TF+N+ +S DS S + + SE S N + ++ L
Sbjct: 272 STFVNLQTGYCSLSTYCHDAEIMQSGSDDSTISVSDDVCLDSEVDSKLSNGVCAKSQVRL 331
Query: 265 LDLYSGCGAMSTGLCIGASLSGVKLVT-RWAIDINPHA 301
LDLYSGCG MSTGLC+ A L+ V LVT R + I+ +A
Sbjct: 332 LDLYSGCGVMSTGLCLAAHLANVNLVTLRETVSIDCNA 369
>gi|388857258|emb|CCF49100.1| related to Cytosine-specific methyltransferase [Ustilago hordei]
Length = 767
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 153/362 (42%), Gaps = 56/362 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
P PG++D I GPPCQG S NR + +AA +D +N + + ++YL+PKY +MENV
Sbjct: 390 FPCPGEIDMISAGPPCQGFSRKNRHAHREAAEKDSRNLLVCSVLGWVDYLRPKYFVMENV 449
Query: 500 VDI-LKFSGG---FLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ GG + + + L+ M Y G +G++G PQ R R L ++ L
Sbjct: 450 EGFTMSRLGGREQGMVKLVMRCLMKMGYAVTCGYAQSGAFGCPQSRKRFLLLASKDEVTL 509
Query: 556 PQYPLPTHEIVAR---GVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESE 612
P P PTHE + R + + E A+ V SDAISDLP+ + +
Sbjct: 510 PNLPQPTHEFLGRPAHTFLWEDGSETTYNSASTLVGATLPAVTASDAISDLPVF--DWKD 567
Query: 613 DERKYGTVARTEFQKYIRLRRHDVVN----------------LSSAQMASR------PSL 650
Y E Q+ ++ VV L+S Q R
Sbjct: 568 PHVTYLGSDAIEVQRALQGIPQLVVKQGRPTGPEETSYRSQPLNSYQERMRVLAGETACS 627
Query: 651 LYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRW-DPSMERVMLKSGKPL 709
L H+ + ERV + GANF W +P +++ L G
Sbjct: 628 LTQHQTPGYHALAVERVVNVALYPGANFES-------------WSEPGVKKPALL-GTDR 673
Query: 710 VPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGF 769
D ++E S ++ ++ + T+ +LHP+Q R+LT+RE AR QGF
Sbjct: 674 YTDEHFRYERVDSDG-----YFKVLMTKMTTQGS-----MLHPTQRRLLTVRECARAQGF 723
Query: 770 PD 771
PD
Sbjct: 724 PD 725
>gi|310796311|gb|EFQ31772.1| C-5 cytosine-specific DNA methylase [Glomerella graminicola M1.001]
Length = 1141
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 168/373 (45%), Gaps = 69/373 (18%)
Query: 425 EKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FM 483
+ L+ +G S +P G VDF+ GG PC GF+R N +A E KN+ L+ F
Sbjct: 670 DDLQTLALQGKFSKKVPPVGSVDFVSGGSPC---PGFSRLTNDKATPEQRKNQSLVAAFA 726
Query: 484 DVIEYLKPKYVLMENVVDILKFSGGF---LARYAVGRLVSMDYQTRLGIMAAGSYGLPQF 540
I+ +PK+ L+ENV+DI++ + + +V + YQT IM + +YG PQ
Sbjct: 727 SFIDVYRPKFGLLENVMDIVQTKTKRNEDVFSQLICAIVGLGYQTHFFIMDSWAYGSPQS 786
Query: 541 RLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPC--QLE-----KG 593
R RVFL A P KLP+ P+ +H G + ++ + N +P +LE K
Sbjct: 787 RSRVFLCFAAPGLKLPEVPIQSHSHYESG----KRRKTLGWLPNGEPMVERLEIPTPFKF 842
Query: 594 VLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYD 653
V +++A +DLP + + +++ VN +MA
Sbjct: 843 VSIAEATADLPDIMDGKAD----------------------CCVNFPDHRMA-------- 872
Query: 654 HRPFQVNNDDYERVCCIPKRK-GANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPD 712
+ + ++ IP G NFR WD + + M + + L P
Sbjct: 873 ---YSITRPARAQLSVIPMHPWGMNFR------------TTWD-NGKGTMTTAERGLFPS 916
Query: 713 YAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHN-RI--LLHPSQDRVLTIRENARLQGF 769
+ +S + +GR + + ++ TV T P + RI ++H +Q+RVL++ E R QGF
Sbjct: 917 KGERVLSPTS-RAWGRAFPNSVMQTVTTTPSPTDARIGRVMHWNQNRVLSVMEVRRAQGF 975
Query: 770 PDCYQLFGPVKER 782
D + G KE+
Sbjct: 976 LDHEVILGTPKEQ 988
>gi|429768004|ref|ZP_19300180.1| DNA (cytosine-5-)-methyltransferase [Brevundimonas diminuta 470-4]
gi|429189569|gb|EKY30396.1| DNA (cytosine-5-)-methyltransferase [Brevundimonas diminuta 470-4]
Length = 445
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 154/355 (43%), Gaps = 66/355 (18%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
GD+D + GGPPCQG S + R+ ED +N ++ ++ L PK ++ENV +L
Sbjct: 88 GDLDVLLGGPPCQGFSVNSHIRSA----EDPRNFLFRHYVRILRGLAPKTFVLENVPGML 143
Query: 504 KFSGGFLARYAVGRLVSM----DYQTRLGIMAAGSYGLPQFRLRVFLWGARP----FKKL 555
GG + V + S Y I+ A YG+PQ R R+ + G R
Sbjct: 144 SLEGGAFLQELVSEISSSADGPGYDVECRILNAAHYGVPQERFRIVVVGTRKDVSDAVGA 203
Query: 556 PQYPLPTHEIVA----RGVIPNEFQEIIVAYANNQPCQLEKGVLL-----SDAISDLPLV 606
P P H +A +G + F I L + LL AI DLP +
Sbjct: 204 ATLPAPVHYSMAQAHFKGGRSHTFHYAIGHGRRRDNQDLPRVGLLPPTTVEAAIGDLPAL 263
Query: 607 TNNESEDERKYGT--VARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDY 664
TN +D Y + A T +Q+ R + S+L +H ++ +
Sbjct: 264 TNGGGDDLSHYTSKPGALTAYQENAR---------------AHASMLANHWCRELVGPNI 308
Query: 665 ERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTK 724
ERV IP G ++R +P L+ P M+R A++ +H TK
Sbjct: 309 ERVKHIP--VGGDWRSIPRELL--------PPGMQR-------------ALRKDH---TK 342
Query: 725 PFGRLWWDEIVNTVVTRAQPHNRILLH--PSQDRVLTIRENARLQGFPDCYQLFG 777
+GRL DE +T++T+ PH +H SQ R++++RE ARLQ FPD + G
Sbjct: 343 RYGRLSPDEQASTLLTKPDPHWGKFIHYDVSQQRLISVREAARLQSFPDHHVFCG 397
>gi|341819908|emb|CCC56122.1| DNA (cytosine-5-)-methyltransferase [Weissella thailandensis
fsh4-2]
Length = 357
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 145/333 (43%), Gaps = 79/333 (23%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
V+ I GGPPCQG S + + L+D +N L +++++ L+P+ ++ENV +L
Sbjct: 73 VNMIIGGPPCQGFSN----KGKKLGLDDPRNFLFLEYLEMVNRLQPEVFVIENVKAMLTA 128
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
G+ + V R+ ++ Y+ I++A +YG+PQ R R + A+ KK+ + P+PT I
Sbjct: 129 VNGYFIKEIVDRINALGYKVNYSILSASNYGVPQNRQRAIIIAAKD-KKI-KMPVPTVGI 186
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
NN+ + DAISDL + + E E +Y + + +
Sbjct: 187 ------------------NNKTT-------VRDAISDLSYLNSGEGEMISQYRKPSESNY 221
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
Q +R A+ ++LY+H + +++ IP KG + LP L
Sbjct: 222 QTMMR--------------ANSGNILYNHIATSHSQIALDKLAMIPPEKGKEY--LPREL 265
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QP 744
G +Q +GRL WD+ T+ TR P
Sbjct: 266 WG-------------------------------NQKFKTTWGRLEWDKQAPTIDTRFDTP 294
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
N HP +R +T RE AR+Q FPD ++ G
Sbjct: 295 SNGKNSHPYLNRAITPREAARIQSFPDDFEFIG 327
>gi|302690426|ref|XP_003034892.1| hypothetical protein SCHCODRAFT_255903 [Schizophyllum commune H4-8]
gi|300108588|gb|EFI99989.1| hypothetical protein SCHCODRAFT_255903 [Schizophyllum commune H4-8]
Length = 1412
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 148/378 (39%), Gaps = 81/378 (21%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+DF+ GGPPCQ S N +++P DI++ L + +E KP Y L+ENV +L F
Sbjct: 1014 IDFVFGGPPCQSFSKANHYKDPN----DIRSFLPLNMLSFVEAYKPDYFLLENVRGLLDF 1069
Query: 506 SGGFLAR---------------YAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR 550
G R + L+++ YQ + ++ AG +G+PQ R RV GA+
Sbjct: 1070 RLGTTTRGMQDANECIKNSMVKIILRTLIALGYQASVRVLQAGQFGVPQARERVIFLGAK 1129
Query: 551 PFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKG--------VLLSDAISD 602
+P +P+PTH N + P EKG V + DAI D
Sbjct: 1130 LGLPMPVHPVPTHAFPKVPNTANLADGTTLVPLPRAP-NGEKGYIYAPLPPVTIEDAIGD 1188
Query: 603 LP----------LVTNNESEDERK----------YGTVARTEFQKYIRLRRHDVVNLSSA 642
LP ++ + +E K T T + R + +
Sbjct: 1189 LPPFDWVNPHEIFPSSTKDRNECKAREDAGIKQLVATPTSTGLVGFPRPSEYHCPPQNRY 1248
Query: 643 QMASR---PSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSME 699
Q+ R P + + + ERV +P A+FR LP +L P +
Sbjct: 1249 QLQMRRNSPGGVLNMYTRTYRSSLVERVVTVPLEPDADFRRLPEIL---------QPGGQ 1299
Query: 700 RVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR--ILLHPSQDRV 757
R + FGR TV+T+ P ++ LLHP+Q R
Sbjct: 1300 REKRRGS-------------------FGRCGLKGFFATVMTQPNPSSKGTWLLHPTQKRT 1340
Query: 758 LTIRENARLQGFPDCYQL 775
T+RE AR Q FPD ++
Sbjct: 1341 YTVRECARSQSFPDDFEF 1358
>gi|357516639|ref|XP_003628608.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355522630|gb|AET03084.1| Cytosine-specific methyltransferase [Medicago truncatula]
Length = 159
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 80/164 (48%), Gaps = 54/164 (32%)
Query: 364 EENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKC 423
EEN+ + E FEV ++I + Y DP K K G+YFKV WKGY
Sbjct: 25 EENNGE-----EIFEVPKVIDMRYNDPKKEDKHGLYFKVFWKGYDS-------------- 65
Query: 424 KEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFM 483
G D +CGGPPCQG+ K L F+
Sbjct: 66 --------------------GVEDVVCGGPPCQGIK---------------KQTTSLFFI 90
Query: 484 DVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRL 527
++ YL+PK+ LMENVVD+LKFS GFL RYA+GRLV M Y++ L
Sbjct: 91 HIVHYLRPKFTLMENVVDLLKFSYGFLVRYALGRLVQMSYRSHL 134
>gi|443920769|gb|ELU40612.1| C5-DNA-methyltransferase [Rhizoctonia solani AG-1 IA]
Length = 1230
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 164/413 (39%), Gaps = 98/413 (23%)
Query: 442 LPG--DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LPG DVDFIC GPPCQ SG NRFR D + ++ M +++ +PKY L+ENV
Sbjct: 812 LPGRYDVDFICAGPPCQSFSGANRFRKDT----DPRTTMIIAVMAAVDHYRPKYFLVENV 867
Query: 500 VDIL------------------------KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSY 535
+ L + + R+ + + Y R+GI+ A +
Sbjct: 868 PNALTNRILGPSARGRSSDSAETDFHEDNYVEQGILRFITRAALDLGYAIRVGILQASEH 927
Query: 536 GLPQFRLRVFLWGARPFKKLPQYPLPTHEI----------VARGVIPNEFQEIIVAYANN 585
G PQ R R F+ GAR LP +PLP++ + +R P ++ V N
Sbjct: 928 GAPQHRRRAFIMGARHGHTLPNFPLPSYCVPKPETGLRLPSSRYGDPTHQKDGNVPIVGN 987
Query: 586 QPCQLEKGVLLSDAISDL-------PLVTNNESEDERKYGT-------------VARTEF 625
+ + V + DAISDL P E+E R VA +
Sbjct: 988 ---GIHRRVTMWDAISDLAPFEWVNPYFAIPETEASRAEDRRRRTRGETRIPVYVAVKDD 1044
Query: 626 QKYIRLRRHDVV------NLSSAQMASRPS--LLYDHRPFQVNNDDYERVCCIPKRKGAN 677
++ + + V +S Q +R S ++ +H + + V IP A+
Sbjct: 1045 RQAVGIGAGGPVPYRGDSPFTSYQQEARGSETMVSEHYTSSFKSPLFVDVVNIPLSAKAD 1104
Query: 678 FRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNT 737
R LP VL D + V G Y F PF T
Sbjct: 1105 HRALPEVLKRGD-------FLSNVFGSGGASGY--YQGAFGRYDKKAPFA---------T 1146
Query: 738 VVTRAQP--HNRILLHP-------SQDRVLTIRENARLQGFPDCYQLFGPVKE 781
++T +P N +HP +Q R+LT+RE AR QGFPD ++ G V++
Sbjct: 1147 ILTSLRPAKKNGFCIHPDVGGFTLAQKRMLTMRELARAQGFPDHFRFHGTVEQ 1199
>gi|347533667|ref|YP_004842380.1| DNA methylase C-5 cytosine-specific family protein [Sphingobium
chungbukense]
gi|345452348|gb|AEN94388.1| DNA methylase C-5 cytosine-specific family protein [Sphingobium
chungbukense]
Length = 389
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 151/339 (44%), Gaps = 69/339 (20%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
G++D I GGPPCQG S +N Q + D + ++ +++ ++P++++MENV I
Sbjct: 75 GEIDVIVGGPPCQGYSVYNH----QRGVNDPRAGLFREYLRIVKGIQPRWIVMENVTGIT 130
Query: 504 KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
GG + + S+ Y+ + ++ A YG+PQ R RVF R + +P TH
Sbjct: 131 SIGGGGIVHEIFEGMKSLGYRVDMKVLRAEEYGVPQERRRVFFIATRTDAPI-LFPEQTH 189
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVART 623
G++P V + DAISDLP + N + R YG +
Sbjct: 190 ---GPGLLPF--------------------VTVWDAISDLPKLENGDRAGPRPYGKRPQN 226
Query: 624 EFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPG 683
+Q +R +++ +H +++ + ER+ IP G ++RD+P
Sbjct: 227 SYQALLR---------------GDCTIVQNHSASRLSRINQERMRHIP--AGGSWRDIPI 269
Query: 684 VLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQ 743
L L +G L A + +H TK +GR ++ TV+T+
Sbjct: 270 DL-----------------LPAGMKL----AKRSDH---TKRYGRPKKTDLSCTVLTKCD 305
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
H +HP QDR T+RE ARLQ FPD + G E+
Sbjct: 306 VHWGAYIHPVQDRSFTVREAARLQSFPDFFTFKGNSTEQ 344
>gi|386586337|ref|YP_006082739.1| modification methylase HaeIII [Streptococcus suis D12]
gi|353738483|gb|AER19491.1| modification methylase HaeIII [Streptococcus suis D12]
gi|451939649|gb|AGF89780.1| C-5 cytosine-specific DNA methylase [Streptococcus phage phiD12]
Length = 355
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VD + GGPPCQG S + + + D +N F+ V+E + P Y +MENV ++L
Sbjct: 70 VDVVVGGPPCQGYSQ----KGSRKTIHDERNFLFKYFVKVVELVSPNYFVMENVPNLLTA 125
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
GF + + + Y + I+ A +G+PQ R R + G + KK + L
Sbjct: 126 EKGFFKQELITLFEELGYSLSMEIVDASKFGVPQRRRRAIILGKKG-KKSVTFRL----- 179
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
+ +K V + DAISDL + + + E+E+ Y A++ +
Sbjct: 180 -----------------------EEKKSVTIWDAISDLAFLESGDGEEEQNYLFPAQSNY 216
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
Q+ +R S +LY+H+ + ER+ IP+
Sbjct: 217 QQELR---------------SDSKILYNHKATNHSKIALERLKMIPEN------------ 249
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QP 744
SGK +P+ + S T + R+ +E T+ TR P
Sbjct: 250 -------------------SGKDSLPEEHLTKSIYSGT--WERMRKNEQSVTITTRFDTP 288
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCYQLFGP 778
+ HP +R +T+RE ARLQ FPD + FGP
Sbjct: 289 SSGKFTHPFLNRAITVREAARLQSFPDSFIFFGP 322
>gi|393213319|gb|EJC98816.1| S-adenosyl-L-methionine-dependent methyltransferase [Fomitiporia
mediterranea MF3/22]
Length = 871
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 169/413 (40%), Gaps = 87/413 (21%)
Query: 421 SKCKEKLKEF-VTKGYRSNI----------LPLP---GDVDFICGGPPCQGVSGFNRFRN 466
++C K+ E+ V++ SN+ LP P ++D I G PCQ S NR+
Sbjct: 436 NQCANKMLEYAVSRANGSNMTLNDLLTGEALPAPPQREEIDCIVSGFPCQPHSRMNRY-- 493
Query: 467 PQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGG---------------FLA 511
P+A D+ N L + +E+L PKY L ENV ++ G
Sbjct: 494 PRAT--DLVNELYLTTISWVEHLCPKYCLFENVPGFIQHRIGATQIDQHTIQGGIIQGGI 551
Query: 512 RYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVI 571
+ L ++ YQ R + A YG PQ R R FLW AR LP P THE A +
Sbjct: 552 KLTCRTLTALGYQVRFATLQAAHYGTPQRRKRFFLWAARTGLPLPDLPPRTHEFPATKSL 611
Query: 572 PNEFQEIIVAYANNQPCQLEKG----VLLSDAISDL-------PLVTNNESEDERKYGTV 620
V A + C+ V ++DAISDL P E+ +R+
Sbjct: 612 AIRCSNGDV--AGSVSCETGTAPMPMVTVADAISDLKRWDWENPHKEYKETAHDRR---- 665
Query: 621 ARTEFQKYIRLRRHDVVNLS---------------SAQMASRPSLLYDHRPFQVNNDDYE 665
R + +++R H A+ RP+ H + N+ E
Sbjct: 666 EREARRHIVQVRSHPGDGGCGIGGVEYEHEPRTAYQARCRRRPASELQHVTYCFNDITIE 725
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDNKVR-WDPSMERVMLKSGKPLVPDYAMKFEHQSSTK 724
+P G++F+DL ++K + W ER+ PL + H T
Sbjct: 726 ATVNVPLEGGSSFKDL-------NHKPKLWK---ERI-----NPL----SANARHGYKTH 766
Query: 725 PFGRLWWDEIVNTVVTRAQPHNR--ILLHPSQDRVLTIRENARLQGFPDCYQL 775
F RL D+ NT+VT P + +L+P R++T+RE AR QGFPD ++
Sbjct: 767 MFVRLEADKCFNTIVTNIGPTAKQSKVLNPWCKRLVTVRELARSQGFPDAFEF 819
>gi|353240447|emb|CCA72316.1| related to cytosine-specific methyltransferase EC=2.1.1.37-Laccaria
bicolor [Piriformospora indica DSM 11827]
Length = 1301
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 161/389 (41%), Gaps = 85/389 (21%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQL-LVFMDVIEY---LKP 491
R +P P VD I G PC G S + + D K Q+ LV + + +P
Sbjct: 905 RKRHMPPPQAVDVILAGLPCSGFSMQSVYG------RDTKEAQVGLVLVARGTHKASYRP 958
Query: 492 KYVLMENVVDI-----LKFSGGFLARYAVGRLV-----SMDYQTRLGIMAAGSYGLPQFR 541
++ ++ENV + L +S +A+ +++ ++ Y R G+ A +YG PQ R
Sbjct: 959 RFFIIENVARMINYESLDYSTEETISFAIVKIILRTLTALGYSVRWGLFNAVNYGSPQHR 1018
Query: 542 LRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEK------GVL 595
R+F +G+R +LP+ P+PTH VA FQ + P +L V
Sbjct: 1019 SRLFFYGSRGGSRLPEIPIPTH--VASKNSRTRFQRFTLV-----PTKLMHYLAALPPVN 1071
Query: 596 LSDAISDLP----LVTNNESEDERKYGTVARTEFQKYI---------------------R 630
+S AI DLP V N S G R +I R
Sbjct: 1072 ISSAIGDLPPFDWTVRNPLS------GVTQRANVPSFIGESPAGSSTAGYPHGCDYQQER 1125
Query: 631 LRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDN 690
+ + + L+ R F+ ++ E+V + R A+ R +P VL
Sbjct: 1126 PKTLYQARMRRGMHVGKKVTLHYTRTFKEHSHKAEKVIAVAMRPNADHRTIPRVL----- 1180
Query: 691 KVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR--I 748
+D + + + + L + +GRL W + N+ VTR P ++
Sbjct: 1181 ---YDWAYSHPLSAAARDLW-----------APGRYGRLDWQGVFNSFVTRIDPTSKQGK 1226
Query: 749 LLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+LHPSQ RVLTIRE AR QGFPD YQ G
Sbjct: 1227 VLHPSQRRVLTIREVARGQGFPDHYQFCG 1255
>gi|444302585|gb|AGD99091.1| chromomethyltransferase 3, partial [Quercus suber]
Length = 67
Score = 103 bits (257), Expect = 4e-19, Method: Composition-based stats.
Identities = 45/55 (81%), Positives = 50/55 (90%)
Query: 728 RLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
RLWWDE V TVVTRA+PHN+ +LHP Q+RVLTIRENARLQGFPDCY+L GPVKER
Sbjct: 1 RLWWDETVPTVVTRAEPHNQAILHPVQNRVLTIRENARLQGFPDCYKLCGPVKER 55
>gi|443899025|dbj|GAC76358.1| hypothetical protein PANT_20d00075 [Pseudozyma antarctica T-34]
Length = 758
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 151/371 (40%), Gaps = 69/371 (18%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LP PGDVD I GPPCQG S N+ AA +D +N + + +E+L+PKY ++E
Sbjct: 376 NALPRPGDVDVIAAGPPCQGFSRKNQTAARDAAEKDPRNLLVCTVLGWVEHLQPKYFILE 435
Query: 498 NVVDILKFS-GGF---LARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFK 553
NV GG + + + L+ + Y G + +G+YG Q R R L A+
Sbjct: 436 NVEGFTASKLGGHDQGMVKLVLAVLLKIGYAATWGFVQSGAYGCAQSRGRFILLAAKQEL 495
Query: 554 KLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQ-LEKGVLLSDAISDLPLV------ 606
LP+ P PTH+ R + + + + P + + ++D I DL +
Sbjct: 496 TLPKLPQPTHDFQGRSSSGFWWSDASGQHTSRVPSMPILPALSVADTIDDLAVFDWRDPH 555
Query: 607 ----TNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDH-------- 654
+ E ER+ +A+ E +S A+ P+ Y
Sbjct: 556 QTYEGPDAIELERERAGIAQLEVASGT------PTGFASTPYATPPNTSYQQRMRAFGGK 609
Query: 655 ---RPFQVNNDDY-----ERVCCIPKRKGANFR--DLPGV----LVGPDNKVRWDPSMER 700
R Q Y ERV + GA + LP V L+ D RW
Sbjct: 610 IMTRTRQHQTSGYSAIMVERVVNVALEPGATYDSWSLPSVNKPALLSLDQTERWR----- 664
Query: 701 VMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTI 760
+ KFE S F +I+ T V R + +LHP+Q R+LT+
Sbjct: 665 -----------NEHFKFERLDSDGYF------KILTTKV-RGEGS---MLHPTQRRLLTV 703
Query: 761 RENARLQGFPD 771
RE AR QGFPD
Sbjct: 704 RECARAQGFPD 714
>gi|410643136|ref|ZP_11353638.1| DNA (cytosine-5-)-methyltransferase [Glaciecola chathamensis S18K6]
gi|410137314|dbj|GAC11825.1| DNA (cytosine-5-)-methyltransferase [Glaciecola chathamensis S18K6]
Length = 356
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 136/337 (40%), Gaps = 81/337 (24%)
Query: 442 LPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVD 501
L GD I GGPPCQG S + + L D +N L +++ +E + P ++ENV
Sbjct: 67 LNGDKTIIIGGPPCQGFSQ----KGKRIGLNDERNFLFLKYIECVEVINPIAFVIENVPG 122
Query: 502 ILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLP 561
+L GGF + +L + Y ++ A YG+PQ R R F+ G R +
Sbjct: 123 LLTNEGGFFLNEIIEKLQGLGYSLFERVLNASDYGVPQNRKRAFIVGLRTENATFTW--- 179
Query: 562 THEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVA 621
P + K V ++DAISDLP++ + E Y T
Sbjct: 180 -------------------------PTEFGKKVTINDAISDLPILKSGEGSKSAGYRTAP 214
Query: 622 RTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDL 681
+++Q +R V+N S + H P + ER+ IP+ G DL
Sbjct: 215 VSDYQVKMRGTVSKVLNHVSTK----------HSPLVL-----ERLKLIPEDGGRT--DL 257
Query: 682 PGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR 741
P P++ K + + + RL + I T+ TR
Sbjct: 258 P----------------------------PEHLTK---STFSGTWCRLPANGIARTITTR 286
Query: 742 A-QPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + + P QDR LT+RE AR+Q FPD ++ G
Sbjct: 287 FDTPSSGMFTLPRQDRCLTVREAARIQSFPDSFRFPG 323
>gi|392595567|gb|EIW84890.1| S-adenosyl-L-methionine-dependent methyltransferase [Coniophora
puteana RWD-64-598 SS2]
Length = 1176
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 159/411 (38%), Gaps = 120/411 (29%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
+P PGDV+FI GGPPCQ S N + +DI+ + + +E+ +P++ L+ENV
Sbjct: 756 MPQPGDVNFIYGGPPCQPFSRMNSHKKS----DDIRATLVANMLSYVEFYRPRFFLLENV 811
Query: 500 VDIL--------------KFSGGF-----------------LARYAVGRLVSMDYQTRLG 528
+ +L + G + ++ L+++ YQ +
Sbjct: 812 LGMLGHKLEDQIGREQDNQLKGRLPKERSSDEQEDQSIKFGVVKFITRCLLALGYQIQFK 871
Query: 529 IMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI---VARGVIPNEFQEIIVAYANN 585
I+ AG YG PQ R R+ WGA+ + +P +PLPTH + + + ++P + V + +
Sbjct: 872 ILNAGQYGAPQSRRRIIFWGAKNGELMPAFPLPTHSLQNPLQKSLLPTGSWSLPVTWDHQ 931
Query: 586 ----------------QPCQLEKGVLLSDAISDLPLV---TNNESEDERKYGTVARTEFQ 626
C V + DAI DLP N +ED+ + +E +
Sbjct: 932 GLWLLQDSVYEEVTGLHSCAPLDMVTIEDAIGDLPPFDWEHPNPTEDD-----IEESEAR 986
Query: 627 KYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLV 686
+ I + V + Q RVC +G P +
Sbjct: 987 QDIGILAFPAVKTETCQ----------------------RVCGF---EGPAHYAYPPMT- 1020
Query: 687 GPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEH-------------------QSSTKPFG 727
S ++ M G P V + F SST
Sbjct: 1021 ----------SYQQAMRSKGAPQVTYHYTTFHKPTTVEKVLQNLSTSTDGPPSSSTPRKV 1070
Query: 728 RLWWDEIVNTVVTRAQPHNRIL---LHPSQDRVLTIRENARLQGFPDCYQL 775
RL + + T++T + R +HP+Q R L+IRE AR QGFPD Y+L
Sbjct: 1071 RLRANSLFKTIMTSMPLNGRHAGSSIHPTQKRGLSIREVARAQGFPDHYKL 1121
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 9/66 (13%)
Query: 265 LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLS 324
L+L+ G G + TGL +SG + T+WA DI+P + K+ K NHP+ V N+ S
Sbjct: 676 LELFCGAGGLGTGL----EMSGF-VETKWAADISPSSAKTFKSNHPDATVYNQCT----S 726
Query: 325 LLKEWA 330
LL E A
Sbjct: 727 LLLEHA 732
>gi|206975132|ref|ZP_03236046.1| modification methylase HaeIII [Bacillus cereus H3081.97]
gi|206746553|gb|EDZ57946.1| modification methylase HaeIII [Bacillus cereus H3081.97]
Length = 352
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 137/338 (40%), Gaps = 82/338 (24%)
Query: 441 PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVV 500
P G +D I GGPPCQG S + + + D +N F+ V+ +KP Y +MENV
Sbjct: 65 PYVGKIDVIIGGPPCQGFSQ----KGQRKTINDDRNFLFKYFVSVVGLIKPMYFVMENVP 120
Query: 501 DILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPL 560
++L G+ + S+ Y G++ A +G+PQ R R + G R
Sbjct: 121 NLLTAEKGYFKKEIYDLFKSLGYSLSSGVLNAADFGVPQNRKRAVIIGKR---------- 170
Query: 561 PTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTV 620
G+ P EF P + + DAISDL + + E + + Y
Sbjct: 171 --------GLAPAEF-----------PKPKNEKNTIWDAISDLAFLESGEGNEVQDYRKA 211
Query: 621 ARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRD 680
A + +Q+ +R + + LY+H + ER+ IP
Sbjct: 212 AESFYQQVMR---------------KKSTQLYNHVATNHSKVALERLKLIP--------- 247
Query: 681 LPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVT 740
P+ +G+ ++P + S T + R+ DE+ TV T
Sbjct: 248 -------PN---------------AGREVLPKEHLTKSIYSGT--WTRMRKDEVSVTVTT 283
Query: 741 RA-QPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
R P + HP +R +T+RE AR+Q FPD ++ FG
Sbjct: 284 RFDTPSSGKFTHPFLNRAITVREAARIQSFPDDFRFFG 321
>gi|336377037|gb|EGO05372.1| hypothetical protein SERLA73DRAFT_68986 [Serpula lacrymans var.
lacrymans S7.3]
gi|336390079|gb|EGO31222.1| hypothetical protein SERLADRAFT_432870 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1211
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 162/378 (42%), Gaps = 75/378 (19%)
Query: 443 PGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV--- 499
PGD+D I G PCQ S N ++ D+K+ +L + I++L+P+Y + ENV
Sbjct: 819 PGDIDCIVAGFPCQPHSRLNMYQK----ANDLKSNLILNVLSWIDFLQPRYCIFENVRGF 874
Query: 500 ---------VDILKFSGGFLA---RYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLW 547
VD K +GG ++ + +++M YQ R+G++ A YG PQ R+R FL
Sbjct: 875 LQYNLKAHQVDEHKVAGGIEMGGLKFVMRVMIAMGYQVRVGLLQAAHYGTPQTRVRFFLV 934
Query: 548 GARPFKKLPQYPLPTHEIVARGVI----PNEFQEIIVAYANNQPCQLEKGVLLSDAISDL 603
++ LP+ P P+H+ + PN + + N V + DAI DL
Sbjct: 935 ASKHGYPLPELPQPSHDFPLVDSLEIKFPNGHYVRPIKFMNG--TAPHSYVSIDDAIHDL 992
Query: 604 PLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRP---FQV- 659
PL + S +R + E + I+ + D A R +Y H P FQ+
Sbjct: 993 PLF--DWSNPDRAGRSRQDPETRDDIKQVKCDK---QKAWCGLRGQAVYRHEPRTAFQLW 1047
Query: 660 ----NNDDYE------------RVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVML 703
+D + RV IP + A++RD+P L W+
Sbjct: 1048 CRRKPTEDLQQYTRTYLPIKVKRVRSIPLKAKADYRDMPSAL--------WEWQTAN--- 1096
Query: 704 KSGKPLVPDYAMKFEHQSSTKP--FGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLT 759
P AM +S +P +GRL T VT P + +L+P R++T
Sbjct: 1097 -------PGSAMA---RSGFRPGLYGRLDRSLWFQTTVTNVDPTAKQCRVLNPYCMRIVT 1146
Query: 760 IRENARLQGFPDCYQLFG 777
+RE AR QGFPD + +
Sbjct: 1147 VRELARSQGFPDYFTFYA 1164
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 35/236 (14%)
Query: 113 GCLYNLGDDAYVKAEEGA--VDYIARI---VELFESVDGEPYFKARWFYRAEDTVIKDLA 167
G Y++ D +KA+EG V ++ I L ES EP K + F R + ++
Sbjct: 574 GVSYHINDFVLIKAKEGPCHVGHLTSISFPTRLRES--DEPSVKVKLFGRMDKLGLRPHN 631
Query: 168 CLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHL 227
+ D + +F +D E + L+ ++ + V + L + + ++ ++Y H
Sbjct: 632 IIKDERHLFATDDEMEVVLSDLLG---LCFVYPHNSLPDPRAWLLAAPNHFFVRY---HF 685
Query: 228 TFLNINNESNRRDSDASSTISSETGSNSPIGQPE-------------MSLLDLYSGCGAM 274
L++ + + RRD + + +T + + + D + G GA
Sbjct: 686 PSLDVRSWNQRRDMEPHELLICKTCVQENLDKHNTLKEFMSNARRRPLRAFDPFGGSGAF 745
Query: 275 STGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWA 330
GL SG VT A++I+P A +++K N P+T V N+ A+ L +WA
Sbjct: 746 GLGL----EESGCIKVTH-AVEISPSAARTMKRNCPDTTVYNQCANKIL----QWA 792
>gi|298253558|ref|ZP_06977348.1| site-specific DNA methylase [Gardnerella vaginalis 5-1]
gi|297532325|gb|EFH71213.1| site-specific DNA methylase [Gardnerella vaginalis 5-1]
Length = 317
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 142/333 (42%), Gaps = 82/333 (24%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D I GGPPCQG S + + + D +N ++ V+E +KPKY +MENV ++L
Sbjct: 30 IDVIIGGPPCQGFSQ----KGQRKTIYDKRNFLFEYYVKVVELVKPKYFVMENVPNLLTA 85
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
G+ +M Y + G++ A +G+PQ R R + G
Sbjct: 86 EKGYFFNEIETLFNAMGYFLQHGVLNAADFGVPQNRKRAVIIGK---------------- 129
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
GV P + P L + V + DAISDL + + E ++ ++Y ++E+
Sbjct: 130 -MNGVAP------------SLPSSLNEKVTIWDAISDLAFLESGEGDEVQEYRYAPQSEY 176
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
+K +LR H +LLY+H+ + + +R+ IP
Sbjct: 177 EK--KLRGH-------------ANLLYNHKATKHSPLSLKRLRMIP-------------- 207
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QP 744
P+ +GK ++P + S T + R+ D+I T+ TR P
Sbjct: 208 --PN---------------AGKEVLPKEHLTKSIYSGT--WTRMKKDDISVTITTRFDTP 248
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ HP +R LT+RE AR+Q FPD + G
Sbjct: 249 SSGKFTHPFLNRALTVREAARIQSFPDEFIFIG 281
>gi|367047877|ref|XP_003654318.1| hypothetical protein THITE_2155132 [Thielavia terrestris NRRL 8126]
gi|347001581|gb|AEO67982.1| hypothetical protein THITE_2155132 [Thielavia terrestris NRRL 8126]
Length = 2062
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 167/370 (45%), Gaps = 67/370 (18%)
Query: 425 EKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FM 483
+ L +G ++ +P PG+VDFI G PC GF+ + L IKN+ L+ F
Sbjct: 1496 DDLLRLALEGKYADNVPRPGEVDFISAGSPC---PGFSLLTPDKTKLVQIKNQSLVASFA 1552
Query: 484 DVIEYLKPKYVLMENVVDILKF----SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQ 539
+++ +PKY ++ENV+ I++ S L++ +V + YQ +L + A SYG PQ
Sbjct: 1553 SFVDFYRPKYGILENVITIVQARHNRSEDVLSQLFCA-IVGLGYQAQLILGDAWSYGAPQ 1611
Query: 540 FRLRVFLWGARPFKKLPQYPLPTHE----IVARGVIPNEFQEIIVAYANNQPCQLEKGVL 595
R RVF + A P +LP+ P P+H + ARG+ E V+ + P K V
Sbjct: 1612 GRSRVFFYFAAPGLRLPESPTPSHSHFPGVKARGLGEMCNGEPFVS-RSFAPTPF-KYVS 1669
Query: 596 LSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHR 655
++ ++DLP + + ++E I + H V + + ++ + + H
Sbjct: 1670 AAEGMADLPYIGDGKAEPA--------------IAVPDHRVCTGITPALRAQIAAIPTH- 1714
Query: 656 PFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAM 715
P +N + + C GV+ D R + +G
Sbjct: 1715 PHGMN---FVKTCNA------------GVMTPGD----------RALFPAG--------- 1740
Query: 716 KFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR---ILLHPSQDRVLTIRENARLQGFPDC 772
F + +GR+ ++++TV TR+QP + LH +DR LT++E R QGFPD
Sbjct: 1741 GFRVSQRSHGWGRVKPSDVLSTVTTRSQPTDARAGTGLHWHEDRPLTVQEVRRAQGFPDH 1800
Query: 773 YQLFGPVKER 782
L G V ++
Sbjct: 1801 EVLLGRVADQ 1810
>gi|386749158|ref|YP_006222365.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
00-7128]
gi|384555401|gb|AFI03735.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
00-7128]
Length = 355
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 139/333 (41%), Gaps = 82/333 (24%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
++ I GGPPCQG S N+ +N L+D +N L ++D+++ +KP+ ++ENV +++
Sbjct: 73 INMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIDIVKAIKPQIFIIENVKNLISC 128
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
+ G+ + + + YQ I+ A YG+PQ R R F+ GAR F
Sbjct: 129 AKGYFLKEIKEKFNILGYQLSYHILNARDYGVPQSRERAFIVGARYFNF----------- 177
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
+F + +P Q+ V + +AISDL + +NE E Y ++ +
Sbjct: 178 --------DFNLL-------EPLQI---VSVKEAISDLAYLNSNEGAFESDYSKPIQSTY 219
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
Q A M + LY+H+ + E++ IP +G LP L
Sbjct: 220 Q---------------ALMRKNSNKLYNHKATNHSEIALEKLKLIPNEQGK--ECLPKNL 262
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QP 744
G Q +GRL WD++ T+ TR P
Sbjct: 263 HGK-------------------------------QQFKSTWGRLSWDKVSPTIDTRFDTP 291
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
N HP R +T RE AR+Q F D Y +G
Sbjct: 292 SNGTNSHPELHRSITPREAARIQSFSDDYIFYG 324
>gi|157412795|ref|YP_001483661.1| site-specific DNA methylase [Prochlorococcus marinus str. MIT 9215]
gi|157387370|gb|ABV50075.1| Site-specific DNA methylase [Prochlorococcus marinus str. MIT 9215]
Length = 698
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 149/345 (43%), Gaps = 61/345 (17%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRN-------PQAALEDIKNRQLLVFMDVIEYLKPKYVLM 496
G++ I GGPPCQ S ++R L + + F+ ++E +KPK LM
Sbjct: 119 GEISLIAGGPPCQPFSRNIKWRKHNEEVSAQHHELNEDRRELWESFISIVEQVKPKAFLM 178
Query: 497 ENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP 556
ENV DI + + R + R Y+ ++ A YG+PQ R R+F+ G + + P
Sbjct: 179 ENVTDIAQTGEQEIYRSIINRAEKAGYRINPKLIYAWQYGVPQLRPRLFISGTKINECAP 238
Query: 557 -QYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTN--NESED 613
++P P ++ V E+ V L +AISDLP +T NE D
Sbjct: 239 MKWPKPKYDSV------------------------EEAVTLDEAISDLPPLTGGWNEKWD 274
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E+ ++QK +R D +++ +++DH +V DD E + +
Sbjct: 275 EKFSYEGPTNDYQKLMR----DWLDIGD-------EMIHDHLIRKVREDDLETFKLM-RS 322
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKF-EHQSSTKPFGRLWWD 732
G + L + + R+ S+ + GK + + M F + + KP +
Sbjct: 323 TGVKYSQL------SEEQRRY--SVTSKAFREGKKVKQNQKMSFGDKYNILKP------N 368
Query: 733 EIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
E T+ +HP Q+R L++RE AR+Q FPD + +G
Sbjct: 369 EPCLTITAHMSKDGYWYIHPHQNRTLSVREAARVQSFPDGFNFYG 413
>gi|156549014|ref|XP_001607336.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI [Nasonia
vitripennis]
Length = 1682
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 162/382 (42%), Gaps = 80/382 (20%)
Query: 439 ILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMEN 498
+LP DV+F+C PC+ + K+ + F+ +Y KP ++E
Sbjct: 1297 LLPRKDDVEFLCATLPCENYKTM-------TDITVFKHSYIATFLSYCDYYKPSLFILEA 1349
Query: 499 VVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQY 558
++K S F+ + + LVSM YQ +M G YG PQ R R L GA P LP++
Sbjct: 1350 DEKLIKRS--FVLKLTLACLVSMGYQVTFDLMQVGCYGAPQNRRRSVLLGAAPDSVLPKF 1407
Query: 559 PLPTHEIVARGVIPNEFQEIIVAYANNQPCQLE--------KGVLLSDAISDLPLVTNNE 610
P H V P E+ + + + Q + V + DA+ DLP T
Sbjct: 1408 PERLH------VFPKPLCELGIVIDSKKYTQDTFWTESAPYRSVTVQDALIDLP-TTKVA 1460
Query: 611 SEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCI 670
+E Y + + F K +RL + P+ +++H + R+ I
Sbjct: 1461 ITEEMNYDAKSTSLFSKIMRLNMLE------------PT-VFNHVCKDLGPLVECRISQI 1507
Query: 671 PKRKGANFRDLPGVLVGPDNKVRWDPSMERVM-----LKSGKP----------------- 708
P G+++R+LP + + +++ + ++++ +++GK
Sbjct: 1508 PLAVGSDWRNLPNI----EMQLKDESYAKKLIYNYDDVEAGKSSNGELRGVCSCASGERC 1563
Query: 709 ---------LVPDY----AMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPS 753
L+P + A K +H + + RL WD N +T QP +LHP+
Sbjct: 1564 DPRDRQHGCLIPWHLVHSARKNKHWAGI--YSRLQWDGFFNGAITNPQPLGTQGPVLHPT 1621
Query: 754 QDRVLTIRENARLQGFPDCYQL 775
Q RV+++RE AR QGFPD + L
Sbjct: 1622 QPRVVSVRECARAQGFPDEFVL 1643
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 123 YVKAEEGAVDY---------IARIVELFESVDGEPYFKARWFYRAEDTVIKD-LACLVDR 172
Y KAE+ +D I I E+F + + Y K + YR E+T + L D
Sbjct: 1085 YRKAEDAVIDSKFDMPAPFDIGYITEIFTT--DKLYIKVKKLYRPENTHRNEVLIKQNDM 1142
Query: 173 KRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNI 232
++ S+ N +V K +A + + N+ P D +Y F+ +
Sbjct: 1143 NMLYWSNEVCTVSFNYVVRKCYVAHIKDFSKSVEEWSNLGP-DRFY----------FMQM 1191
Query: 233 NNESNRRDSDASSTISSETGSNSPIGQPE---MSLLDLYSGCGAMSTGLCIGASLSGV-K 288
++ D + + + + PI P+ M+ L++++GCG GL +G SGV K
Sbjct: 1192 YHDKKFTDIERNMYGCEDVPLDPPIDYPDVDAMTSLEIFAGCG----GLSLGLRESGVIK 1247
Query: 289 LVTRWAIDINPHACKSLKFNHPETKV 314
+ WAI+ + A + + N+P+ V
Sbjct: 1248 KLGSWAIESDVDAANTFQLNNPDITV 1273
>gi|283783021|ref|YP_003373775.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05]
gi|283441534|gb|ADB14000.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05]
Length = 357
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 140/333 (42%), Gaps = 82/333 (24%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D I GGPPCQG S + + + D +N ++ V+E +KPKY +MENV ++L
Sbjct: 70 IDVIIGGPPCQGFSQ----KGQRKTIYDKRNFLFEYYVKVVELVKPKYFVMENVPNLLTA 125
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
G+ +M Y + G++ A +G+PQ R R + G
Sbjct: 126 EKGYFFNEIETLFNAMGYFLQHGVLNAADFGVPQNRKRAVIIGK---------------- 169
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
GV P + P L + V + DAISDL + + E ++ ++Y ++E+
Sbjct: 170 -MNGVAP------------SLPSSLNEKVTIWDAISDLAFLESGEGDEVQEYRYAPQSEY 216
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
+K +LR H +LLY+H+ + + +R+ IP
Sbjct: 217 EK--KLRGH-------------ANLLYNHKATKHSPLSLKRLRMIPPN------------ 249
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QP 744
+GK ++P + S T + R+ D+I T+ TR P
Sbjct: 250 -------------------AGKEVLPKEHLTKSIYSGT--WTRMKKDDISVTITTRFDTP 288
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ HP +R +T+RE AR+Q FPD + G
Sbjct: 289 SSGKFTHPFLNRAITVREAARIQSFPDEFIFIG 321
>gi|255280633|ref|ZP_05345188.1| modification methylase DdeI [Bryantella formatexigens DSM 14469]
gi|255269098|gb|EET62303.1| DNA (cytosine-5-)-methyltransferase [Marvinbryantia formatexigens
DSM 14469]
Length = 378
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 135/334 (40%), Gaps = 68/334 (20%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
++D I GGPPCQG S Q +D +N ++ + ++P+ + ENV I+
Sbjct: 70 AEIDVITGGPPCQGFS-----LAGQRLSDDPRNTLFREYVRIAADIRPRVLFFENVHGIM 124
Query: 504 KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
G + + V + YQ + ++ A YG+PQ R R L G R F K +P PTH
Sbjct: 125 NMQNGRVLKAIVTEFEKIGYQCKYNLVNAADYGVPQARPRFVLIGIRGFDKKITFPQPTH 184
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVART 623
N F+ ++ Y V ++DA S+LP+V E ++ K
Sbjct: 185 GKNEESGQMNLFKRELLPY-----------VTVNDAFSNLPVVNQGEGAEKMKMRNHYDN 233
Query: 624 EFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPG 683
+FQK R+ P ++Y+HR + + ER IP +G N LP
Sbjct: 234 DFQKKCVGERN-------------PGVIYNHRATRHSKAIQERYAMIP--QGCNNSILP- 277
Query: 684 VLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQ 743
P+ + + + + + G+ + ++
Sbjct: 278 ----PEIRTKKQNAYKLDLSLPGRTVTCNFRTD--------------------------- 306
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
L+HP +R LT+RE ARLQ F D Y FG
Sbjct: 307 -----LIHPVMNRGLTVREAARLQSFDDDYCFFG 335
>gi|209546991|ref|YP_002278909.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209538235|gb|ACI58169.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 355
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 140/338 (41%), Gaps = 91/338 (26%)
Query: 449 ICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGG 508
+ GGPPCQG S N+ R A ++ KN F+ ++E LKP++V+ ENV IL+ GG
Sbjct: 69 LFGGPPCQGFSTSNQ-RTRHA--DNPKNWLFREFLRMVETLKPEWVVFENVAGILQTDGG 125
Query: 509 FLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVAR 568
A +L +M Y+ GI+ A +G PQ R R
Sbjct: 126 RFAEAFREQLKAMGYRIAFGILNAADFGCPQRRSRY------------------------ 161
Query: 569 GVIPNEFQEIIVAYANNQPCQLEKGV------LLSDAISDLPLVTNNESEDERKYGTVAR 622
I++A N+ P +L K V L AI DLP + N + DE +YG
Sbjct: 162 ---------IVIAALNSDP-ELPKAVPNVEVPTLWQAIGDLPELLNGATVDELEYGGAPL 211
Query: 623 TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDY-ERVCCIPKRKGANFRDL 681
+E Y R R D+ + + SR N D R IP +G N+RD+
Sbjct: 212 SE---YARRMRSDLAK-CTGHLVSR------------NADSIVARYAHIP--QGGNWRDV 253
Query: 682 PGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR 741
PG++ DP +R SG + RL D V
Sbjct: 254 PGMM--------RDPVTDRRRYHSGI------------------YKRLVQDA---PSVVI 284
Query: 742 AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
+L+HP+QDR L++RE ARLQ F D Y G +
Sbjct: 285 GNFRKNMLIHPTQDRGLSVREAARLQSFSDNYVFHGSI 322
>gi|78778763|ref|YP_396875.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT
9312]
gi|78712262|gb|ABB49439.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT
9312]
Length = 686
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 149/345 (43%), Gaps = 61/345 (17%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRN-------PQAALEDIKNRQLLVFMDVIEYLKPKYVLM 496
G++ I GGPPCQ S ++R L + + F+ ++E +KPK LM
Sbjct: 119 GEISLIAGGPPCQPFSRNIKWRKHNEEVSAQHQELNEDRRELWESFISIVEQVKPKAFLM 178
Query: 497 ENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP 556
ENV DI + + R + R Y+ ++ A YG+PQ R R+F+ G + + P
Sbjct: 179 ENVTDIAQTGEQEIYRSIINRAEKAGYRINPKLIYAWQYGVPQLRPRLFISGTKINECAP 238
Query: 557 -QYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTN--NESED 613
++P P ++ V E+ V L +AISDLP + NE D
Sbjct: 239 MKWPKPKYDSV------------------------EEAVTLDEAISDLPPLKGGWNEKWD 274
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E+ + ++QK +R D +++ +++DH +V DD E + +
Sbjct: 275 EKYSYEGPKNDYQKLMR----DWLDIDD-------EMIHDHLIRKVREDDLETFKLM-RS 322
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKF-EHQSSTKPFGRLWWD 732
G + L + + R+ S+ + GK + + M F + + KP +
Sbjct: 323 TGVKYSQL------SEEQRRY--SVTSKAFREGKKVKQNQKMSFGDKYNILKP------N 368
Query: 733 EIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
E T+ +HP Q+R L++RE AR+Q FPD + +G
Sbjct: 369 EPCLTITAHMSKDGYWYIHPHQNRTLSVREAARVQSFPDGFNFYG 413
>gi|343427737|emb|CBQ71263.1| related to Cytosine-specific methyltransferase [Sporisorium
reilianum SRZ2]
Length = 768
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 163/368 (44%), Gaps = 32/368 (8%)
Query: 425 EKLKEFVTKGYRSNILPLP--GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
+ L+ ++ + +P P G VD I GPPCQG S NR +AA +D +N +
Sbjct: 367 DALRRAISGRLSAQGVPFPQRGQVDVISAGPPCQGFSHRNRTAPREAAQQDPRNLLVCTV 426
Query: 483 MDVIEYLKPKYVLMENVVDIL--KFSG--GFLARYAVGRLVSMDYQTRLGIMAAGSYGLP 538
+ +E+L+PKY+++ENV K G + + + L+ + Y G + +G+ G P
Sbjct: 427 LGWVEHLQPKYLILENVEGFTDSKLGGRKQGMVKLVMKCLLDLGYAATCGFVQSGASGCP 486
Query: 539 QFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQE----IIVAYANNQPCQLEKGV 594
Q R R L AR LP+ PLPTH+ + R P + + A + + +
Sbjct: 487 QSRGRFILLAARRDLVLPRLPLPTHQFLGRKANPFTWTDGTGKTYAAQRASSAAAMLPAI 546
Query: 595 LLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIR-LRRHDVVN-----LSSAQMASRP 648
+SDAI DL + + + Y E ++ R +++ VV+ S + A++P
Sbjct: 547 TVSDAIGDLSRF--DWKDPHQVYAGPDTIELERAQRGIKQLAVVHCQANGFSKIEYATKP 604
Query: 649 SLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL-----VGPDNKVRWDPSMERVML 703
+ R +V + R + G N + V+ G D +P +++ L
Sbjct: 605 LNSFQER-MRVFGGEAARTVSQHQTPGFNALAVERVVNVALRPGADYDSWSEPDIDKPAL 663
Query: 704 KSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIREN 763
G F+++ + G L++ ++ T ++HP Q R+ ++RE
Sbjct: 664 LGGFRFDRWQQKHFKYE---RIDGGLYFKALMTTPTAVGS-----MIHPDQRRIFSVREC 715
Query: 764 ARLQGFPD 771
AR QGFPD
Sbjct: 716 ARAQGFPD 723
>gi|2952279|gb|AAC05485.1| chromomethylase CMT1 [Brassica oleracea var. italica]
Length = 62
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 55/62 (88%)
Query: 459 SGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRL 518
SGFNRFRN +A LED KN+QLLV+M++I+YLKP YVLMENVVD+LKFS GF ARYAV RL
Sbjct: 1 SGFNRFRNNKAPLEDEKNQQLLVYMNIIDYLKPNYVLMENVVDLLKFSKGFCARYAVARL 60
Query: 519 VS 520
V+
Sbjct: 61 VA 62
>gi|317054725|ref|YP_004103193.1| cytosine specific DNA methyltransferase [Paracoccus aminophilus]
gi|294869157|gb|ADF47149.1| cytosine specific DNA methyltransferase [Paracoccus aminophilus]
Length = 363
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 134/332 (40%), Gaps = 72/332 (21%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D +CGGPPCQG S + +D +N+ L F+ ++ + P++ + ENV I
Sbjct: 70 IDVLCGGPPCQGFSLAGK-----RLTDDPRNQLFLEFVRMVNLINPRFFVFENVSGITSM 124
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
SGG + + + Y+ ++ A YG+PQ R R FL G R +K +P P+H
Sbjct: 125 SGGAILEAILQEFRTSGYECFFKVLNAADYGVPQARPRFFLIGTRDGEKY-NFPDPSHA- 182
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
P ++ ++ N P L + DA+SDLP + E +E K T A +
Sbjct: 183 ------PTSVNDLFLS---NMPRHLN----VWDALSDLPYIEQGEGSEEMKNSTQAHNAY 229
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
Q R R L++HR + R IP +G N +P
Sbjct: 230 QLERRGNR-------------SAGTLFNHRATGHSEAIVNRYSAIP--EGGNNSQVP--- 271
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPH 745
+ +++ K V K + ++ TV H
Sbjct: 272 ---------------IHMRTKKINV----FKLHREKPSR------------TVTCN---H 297
Query: 746 NRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
LLHP R T+RE ARLQ F D Y+ FG
Sbjct: 298 RTDLLHPVIPRGTTVREAARLQSFDDDYKFFG 329
>gi|330997449|ref|ZP_08321300.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT
11841]
gi|329570823|gb|EGG52539.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT
11841]
Length = 357
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 131/332 (39%), Gaps = 82/332 (24%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VD I GGPPCQG S P+ ++D +N+ L ++ + KPK L+ENV +
Sbjct: 75 VDIIIGGPPCQGFS----LTGPRN-IDDQRNKLYLAMIETVRRFKPKAFLIENVPGMANL 129
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
GG + + R M Y+ I+ A YG+PQ R R+ G R K ++P+P
Sbjct: 130 YGGAVKEEIIRRFTQMGYKVSCKIVCAADYGVPQIRKRLVFIGLRDSKASYEFPVPYR-- 187
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
+P+ + + DAISDLP + + E+ KY +F
Sbjct: 188 -----LPDNY------------------LTCEDAISDLPALVDTLGEEVGKYEMEPLNDF 224
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
QK +R + LY+H + + +P G N++DLP
Sbjct: 225 QKLMR---------------GACTTLYNHTAINHKQFVKDVIALVP--DGGNYKDLP--- 264
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPH 745
SG + M + +S KP TV T
Sbjct: 265 -------------------SGVGESRTFHMAWTRLNSKKP---------ARTVDT----G 292
Query: 746 NRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+R L H +R T+RE+AR+Q FPD + G
Sbjct: 293 HRNLFHYKYNRCPTVRESARIQTFPDDFVFLG 324
>gi|311977244|gb|ADQ20500.1| M1.BfuAI [Lysinibacillus fusiformis]
Length = 357
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 134/339 (39%), Gaps = 89/339 (26%)
Query: 444 GDVDFICGGPPCQGVSGFN--RFRNPQA--ALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
++D + GGPPCQG S F RF N Q ED +N+ + F+ V+ LKPKY MENV
Sbjct: 69 SEIDLVVGGPPCQGFSVFGKRRFINTQGYNPKEDDRNKLVYEFIRVVRELKPKYFFMENV 128
Query: 500 VDILKFSGGFLARYAVGRLVSMDY-QTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQY 558
L G + S+ Y + + A YG+PQ R R+ + G R + + +
Sbjct: 129 KGFLSLDKGLFVEEVIKEFKSLGYDKIEYKVFCAADYGVPQKRYRMLMIGNRLGQDI-IF 187
Query: 559 PLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYG 618
P PTH + N S Y
Sbjct: 188 PEPTH-------------------------------------------SENPSLLSHPYK 204
Query: 619 TVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANF 678
TV + D+VN + + +H P + + ER+ + + N
Sbjct: 205 TVGQAIM---------DLVNFTETDIP-------NHVPLKHKDIVSERMAYVKEGSKLNI 248
Query: 679 RDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTV 738
DLP L+ RV K+GK V +Y+ ++ RL + NT+
Sbjct: 249 EDLPEHLL----------QATRVDSKTGK--VKNYSHIYK---------RLHRELPSNTL 287
Query: 739 VTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
V HN +HP+ +R LT+RE AR+Q FPD + FG
Sbjct: 288 VPG---HNAFPIHPTLNRTLTVREAARIQTFPDTHVFFG 323
>gi|431758608|ref|ZP_19547233.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium E3083]
gi|430616976|gb|ELB53862.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium E3083]
Length = 352
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 131/345 (37%), Gaps = 88/345 (25%)
Query: 435 YRSNILPLPGD--VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPK 492
Y +I P+ GD +D I GGPPCQG+S P+ ED +N+ L ++ +++ +KPK
Sbjct: 61 YTKDIKPIIGDKRIDVIVGGPPCQGMS----LSGPRK-FEDPRNKLYLSYIRLVKEIKPK 115
Query: 493 YVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPF 552
++ENV+ I+ G + + + M Y + I+ A YG+PQ R RV G
Sbjct: 116 AFVIENVIGIVSLFKGQIKNHILKEFSEMGYNVQFKILLASDYGVPQKRKRVIFVGTLAE 175
Query: 553 KKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESE 612
K+ YP P + + AISDLP + N +
Sbjct: 176 KEF-TYPNPVDYTITTEM----------------------------AISDLPSLENELGD 206
Query: 613 DERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPK 672
E Y T + +Q +R V N +A ++R E + +P
Sbjct: 207 TEMDYLTAPQNSYQSLMRKSSRKVYNHIAANHSNRIK---------------EIISLVP- 250
Query: 673 RKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWD 732
G N++DLP E T+ F W
Sbjct: 251 -DGGNYKDLP-----------------------------------EEFRETRKFNVAWTR 274
Query: 733 EIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
N +R H +RV T+RE+ARLQ FPD + G
Sbjct: 275 FPSNKPSPTIDTGHRHHFHYKYNRVPTVRESARLQSFPDSFIFTG 319
>gi|392597870|gb|EIW87192.1| S-adenosyl-L-methionine-dependent methyltransferase [Coniophora
puteana RWD-64-598 SS2]
Length = 1113
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 151/391 (38%), Gaps = 102/391 (26%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
++D I G PCQ S N ++ D K +L + ++Y+KPKY++ ENV L
Sbjct: 694 EIDCIVAGFPCQPHSRMNMYQR----TTDSKTYLMLNLLSWVDYIKPKYIMFENVRGFLS 749
Query: 505 F------------SGGFLA---RYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA 549
F +GG ++ + L MDYQ R ++ A YG PQ R+R FL GA
Sbjct: 750 FRLRARQKNRHTITGGIEMGGLKFLIRALTEMDYQCRFAVLQAAHYGTPQGRVRFFLVGA 809
Query: 550 RPFKKLPQYPLPTHEIV-----------ARGVIPNEFQEIIVAYANNQPCQLEKGVLLSD 598
R LP P P+H+ R V P I+A P + V + D
Sbjct: 810 RRGLPLPDLPQPSHDFPLEDALVIHLPGGRDVHP------ILAVQGTAPHRF---VTVED 860
Query: 599 AISDL------------PLVTNNES---------EDERKY----GTVARTEFQKYIRLRR 633
AI DL P N + ++ER + G A ++ R
Sbjct: 861 AIGDLKRFDWRKPNPAHPQANGNNNALQLPSVVCDNERAFCGYQGPSATVGYESEPR--- 917
Query: 634 HDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL-----VGP 688
N A SRPS RV +P + GA++R +P L P
Sbjct: 918 ----NTFQAWARSRPSTDIQQYTRTYEPTKVARVMSVPMQAGADYRSIPRELWEWQFANP 973
Query: 689 DNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR- 747
+ V R ++G +GR+ D+ T VT P +
Sbjct: 974 SSAV------ARGGFRAGM------------------YGRIDQDKWFQTTVTNVDPTAKQ 1009
Query: 748 -ILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+L+P R++T+RE AR QGFPD + +
Sbjct: 1010 CKVLNPWCKRMVTVRELARSQGFPDHFVFYA 1040
>gi|428300014|ref|YP_007138320.1| Xre family transcriptional regulator [Calothrix sp. PCC 6303]
gi|428236558|gb|AFZ02348.1| transcriptional regulator, XRE family [Calothrix sp. PCC 6303]
Length = 484
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 165/409 (40%), Gaps = 88/409 (21%)
Query: 393 TKKPGV--YFKVRWKGYG-PSEDTWEPIKGLSKCKEKLKEF-----VTKGYRSNILPLPG 444
TKKP + + V YG + ++ + G+ ++L+ F Y +I L
Sbjct: 111 TKKPVIDLFCGVGGLSYGFEMHEEFQVVAGVDLLSDRLQTFSRNHGTANAYGQDINTLST 170
Query: 445 DVDF--------ICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLM 496
D+ + I GGPPCQG S FRN + D +N F ++ L+P++++
Sbjct: 171 DILYNENPHPFVIVGGPPCQGFSSIRPFRNIER--NDPRNNLAEEFCRIVHNLQPEWIVF 228
Query: 497 ENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR---PFK 553
ENVV +L S G + V + Y+T ++ A YGLPQ R R+ + G+R PFK
Sbjct: 229 ENVVGLLTHSNGKTFQTIVEAFEEIGYRTAAKVLNAAYYGLPQCRERLIIVGSRAGKPFK 288
Query: 554 KLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
+ PTH R + QE I+ + L+ + + +AI DLP V
Sbjct: 289 ----WTQPTHWCEHRSMAGR--QEFILKPSKGLIQDLQSAITVDEAIHDLPEVEAGGRAT 342
Query: 614 ERKYGTVARTEFQKYIR-----LRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVC 668
+ + T ++ +IR L+ H+ H P R+
Sbjct: 343 TYQC-DIESTPYELFIRNGAQQLKMHEAT---------------AHSP---------RML 377
Query: 669 CIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGR 728
I ++ GAN LP +V KSG ++ + + +P
Sbjct: 378 EIIRQAGANIYALPEGVV-----------------KSG------FSSCYSRLNGAEPS-- 412
Query: 729 LWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
V V P + +HP Q R LT RE ARLQGF D ++ G
Sbjct: 413 ------VTLTVNFVHPASNRCIHPHQHRALTPREGARLQGFLDTFEFIG 455
>gi|374572064|ref|ZP_09645160.1| DNA-methyltransferase Dcm [Bradyrhizobium sp. WSM471]
gi|374420385|gb|EHQ99917.1| DNA-methyltransferase Dcm [Bradyrhizobium sp. WSM471]
Length = 338
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 141/333 (42%), Gaps = 81/333 (24%)
Query: 449 ICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGG 508
+ GGPPCQG S N+ +A + N L F+ V++ L P++++ ENV I+ GG
Sbjct: 57 VFGGPPCQGFSTSNQRTRTRA---NPSNWLFLEFLRVVDLLGPEWLVFENVAGIVHTEGG 113
Query: 509 FLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVAR 568
+ +L S Y+ ++ A +G+PQ R R FL G+R ++ P P + VA
Sbjct: 114 YFLGRLESQLKSRGYRVSSALLNAADFGIPQRRTRFFLIGSR--EQSPPSLSPPGDPVAT 171
Query: 569 GVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKY 628
V DAI DLP++ N S+D R Y T A + +
Sbjct: 172 TV--------------------------RDAIWDLPVLRNGSSKDVRPYRTQAVSAYSLA 205
Query: 629 IRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDY-ERVCCIPKRKGANFRDLPGVLVG 687
+R R S + SR N D+ R IP +G N++D+P L+G
Sbjct: 206 LRGNRQTC----SGHLVSR------------NADEIVARYPHIP--QGGNWKDIPDDLMG 247
Query: 688 PD-NKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHN 746
+K R + R + S+++P V
Sbjct: 248 SYFDKSRCHTGIYRRL------------------SASEP------------SVVLGNFRK 277
Query: 747 RILLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
+L+HP+Q R L++RE AR+Q FPD YQ G +
Sbjct: 278 NMLIHPTQSRGLSVREAARIQSFPDNYQFCGSI 310
>gi|421717606|ref|ZP_16156908.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
gi|407223113|gb|EKE92906.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
Length = 584
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 137/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +I+
Sbjct: 301 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNIIS 356
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 357 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRF------------ 404
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +L + V + DAISDL + +NE E Y ++
Sbjct: 405 -------SFDFNLL----------ELSQSVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 447
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 448 YQ---------------ALMRKNSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 490
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +G L W++I T+ TR
Sbjct: 491 LHGK-------------------------------QQFKSTWGHLNWNKISPTIDTRFDT 519
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 520 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 553
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FMDVIEYLKPKYVLMENVVDILK 504
VD + PPCQG+S N + ++IK L++ +D+I+ +KP++ ++ENV+ K
Sbjct: 86 VDLVVATPPCQGMS----VANHKKKNDEIKRNSLVIESIDLIKQIKPRFFILENVLSFYK 141
>gi|210134246|ref|YP_002300685.1| cytosine specific DNA methyltransferase [Helicobacter pylori P12]
gi|210132214|gb|ACJ07205.1| cytosine specific DNA methyltransferase [Helicobacter pylori P12]
Length = 355
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 139/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M S LY+H+ + E++ I K +G LP
Sbjct: 219 YQ---------------ALMRKNSSKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDDYIFYG 324
>gi|123967970|ref|YP_001008828.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str.
AS9601]
gi|123198080|gb|ABM69721.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str.
AS9601]
Length = 698
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 146/345 (42%), Gaps = 61/345 (17%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRN-------PQAALEDIKNRQLLVFMDVIEYLKPKYVLM 496
G++ I GGPPCQ S ++R L + + F+ ++E +KPK LM
Sbjct: 119 GEISLIAGGPPCQPFSRNIKWRKHNEEVSAQHQELNEDRRELWESFISIVEQVKPKAFLM 178
Query: 497 ENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP 556
ENV DI + + R + R Y+ ++ A YG+PQ R R+F+ G + + P
Sbjct: 179 ENVTDIAQTGEQEIYRSIINRAEKAGYRINPKLIYAWQYGVPQLRPRLFISGTKINECAP 238
Query: 557 -QYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTN--NESED 613
++P P ++ LE+ V L +AISDLP + +E D
Sbjct: 239 MKWPKPKYD------------------------SLEEAVTLDEAISDLPPLKGGWDEKWD 274
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E+ + ++QK +R + +++DH +V DD E + +
Sbjct: 275 EKYSYEGPKNDYQKLMR-----------NWLDIDDEMIHDHLIRKVREDDLETFKLM-RS 322
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKF-EHQSSTKPFGRLWWD 732
G + L + + R+ S+ + GK + + M F + + KP +
Sbjct: 323 TGIKYSQL------SEEQRRY--SVTSKAFREGKQVKQNQKMSFGDKYNILKP------N 368
Query: 733 EIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
E T+ +HP Q+R L++RE AR+Q FPD + +G
Sbjct: 369 EPCLTITAHMSKDGYWYIHPHQNRTLSVREAARVQSFPDGFNFYG 413
>gi|420412917|ref|ZP_14912042.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|393030678|gb|EJB31756.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
Length = 355
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 139/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +I+
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNIIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNIQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q +R P LY+H+ + E++ I K +G LP
Sbjct: 219 YQALMR--------------KDSPK-LYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|91069833|gb|ABE10765.1| C-5 cytosine-specific DNA methylase [uncultured Prochlorococcus
marinus clone ASNC1092]
Length = 686
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 148/345 (42%), Gaps = 61/345 (17%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRN-------PQAALEDIKNRQLLVFMDVIEYLKPKYVLM 496
G++ I GGPPCQ S ++R L + + F+ ++E +KPK LM
Sbjct: 119 GEISLIAGGPPCQPFSRNIKWRKHNEEVSAQHQELNEDRRELWESFISIVEQVKPKAFLM 178
Query: 497 ENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP 556
ENV DI + + R + R Y+ ++ A YG+PQ R R+F+ G + + P
Sbjct: 179 ENVTDIAQTGEQEIYRSIINRAEKAGYRINPKLIYAWQYGVPQLRPRLFISGTKINECAP 238
Query: 557 -QYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTN--NESED 613
++P P + V E+ V L +AISDLP + +E D
Sbjct: 239 MKWPKPKFDSV------------------------EEAVTLDEAISDLPPLKGGWDEKWD 274
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E+ + ++QK +R D +++ +++DH +V DD E + +
Sbjct: 275 EKYSYEGPKNDYQKLMR----DWLDIDD-------EMIHDHLIRKVREDDLETFKLM-RS 322
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKF-EHQSSTKPFGRLWWD 732
G + L + + R+ S+ + GK + + M F + + KP +
Sbjct: 323 TGIKYSQL------SEEQRRY--SVTSKAFREGKQVKQNQKMSFGDKYNILKP------N 368
Query: 733 EIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
E T+ +HP Q+R L++RE AR+Q FPD + +G
Sbjct: 369 EPCLTITAHMSKDGYWYIHPHQNRTLSVREAARVQSFPDGFNFYG 413
>gi|420419205|ref|ZP_14918295.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
gi|393031111|gb|EJB32183.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
Length = 355
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 139/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +I+
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNIIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNIQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q +R P LY+H+ + E++ I K +G LP
Sbjct: 219 YQALMR--------------KDSPK-LYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|420420796|ref|ZP_14919880.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4161]
gi|393035595|gb|EJB36639.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4161]
Length = 355
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 139/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +I+
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNIIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNIQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q +R P LY+H+ + E++ I K +G LP
Sbjct: 219 YQALMR--------------KDSPK-LYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|420451207|ref|ZP_14950061.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
gi|393065139|gb|EJB65969.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
Length = 355
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 139/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNIQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q +R P LY+H+ + E++ I K +G LP
Sbjct: 219 YQALMR--------------KDSPK-LYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDTYIFYG 324
>gi|420396777|ref|ZP_14895995.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1313]
gi|393012439|gb|EJB13617.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1313]
Length = 361
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 139/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ LKP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKALKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASHFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q +R P LY+H+ + E++ I K +G LP
Sbjct: 219 YQALMR--------------KDSPK-LYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|384899614|ref|YP_005774994.1| cytosine specific DNA methyltransferase [Helicobacter pylori F30]
gi|317179558|dbj|BAJ57346.1| cytosine specific DNA methyltransferase [Helicobacter pylori F30]
Length = 355
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 139/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ LKP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKALKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNIQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q +R P LY+H+ + E++ I K +G LP
Sbjct: 219 YQALMR--------------KDSPK-LYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W+++ T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLSWNKVSPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|419808401|ref|ZP_14333305.1| Type II restriction modification system C5-cytosine and N4-cytosine
or N6-adenine DNAmethyltransferase [Mycoplasma
agalactiae 14628]
gi|390605804|gb|EIN15177.1| Type II restriction modification system C5-cytosine and N4-cytosine
or N6-adenine DNAmethyltransferase [Mycoplasma
agalactiae 14628]
Length = 593
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 137/340 (40%), Gaps = 89/340 (26%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
++ I GGPPCQG S + + L+D +N L ++D++E + P+ ++ENV +L
Sbjct: 74 INMIIGGPPCQGFSN----KGKKKGLDDPRNFLFLEYLDIVEKVSPELFIIENVKTMLTA 129
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
G+ V ++ M Y+ G++ A +G+PQ R R + + PLP
Sbjct: 130 VKGYFIDQIVKKIELMGYKISYGVLNAKDFGIPQSRPRAIIIAHKEM----AVPLPP--- 182
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
PN V + DAISDL + + + + E +Y A++E+
Sbjct: 183 ------PNGIS-----------------VTVRDAISDLAYLNSADGDYESQYINNAQSEY 219
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSL-LYDHRPFQVNNDDYERVCCIPKRKGANF--RDLP 682
QK +R + SL L++H + + D ++ IP G + +L
Sbjct: 220 QKLMR----------------KGSLKLFNHIATKHSVDVINKLNLIPPECGKEYLSEELK 263
Query: 683 GVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA 742
G +Q +GRL W+ +T+ TR
Sbjct: 264 G-----------------------------------NQKFNTTWGRLKWNTTSSTIDTRF 288
Query: 743 -QPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKE 781
P N HP +R +T RE ARLQ FPD + G E
Sbjct: 289 DTPSNGTNTHPELNRAITPREAARLQSFPDKFIFTGSKTE 328
>gi|420443049|ref|ZP_14941978.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-41]
gi|393061454|gb|EJB62319.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-41]
Length = 361
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVSVQDAISDLAYLCSNEGSFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 219 YQ---------------ALMRKNSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDDYIFYG 324
>gi|380483902|emb|CCF40335.1| cytosine-specific methyltransferase [Colletotrichum higginsianum]
Length = 1246
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 155/360 (43%), Gaps = 55/360 (15%)
Query: 425 EKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FM 483
E+L++ G S+ +P G VDF+ GG PC GF+R + + + +KN+ L+ F
Sbjct: 770 EELQKLALLGTFSDNVPEIGQVDFVSGGSPC---PGFSRLTSDKTKPKQLKNQSLVAAFA 826
Query: 484 DVIEYLKPKYVLMENVVDILKFSGGF---LARYAVGRLVSMDYQTRLGIMAAGSYGLPQF 540
I+ +PKY L+ENV I++ + R + +V + YQTR ++ + S+G PQ
Sbjct: 827 SFIDTYRPKYGLLENVEGIVQPETKKKEDVFRQLICAIVGLGYQTRCFLLDSWSHGAPQT 886
Query: 541 RLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAI 600
R RVFL A P KLP+ P +H ++ + +L+ G L
Sbjct: 887 RTRVFLCFAAPGLKLPKVPRHSH-------------------SHYKARKLKLGQL----- 922
Query: 601 SDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVN 660
+N + ER+ +F ++A A P + F
Sbjct: 923 ------SNGQFMIERQLSVPTALKFVS------------AAAATADLPDIKDGKPDFCAE 964
Query: 661 NDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQ 720
D+ C + K +P D + W + M K+ + PD +
Sbjct: 965 FPDHRVACGVTKNLRTQMSIIPFHPYAMDFLLSWRDG-KGTMTKAERQCFPDRGRRVNKG 1023
Query: 721 SSTKPFGRLWWDEIVNTVVTRAQPHNRI---LLHPSQDRVLTIRENARLQGFPDCYQLFG 777
S + FGR+ + ++T+ T++QP + +LH +Q+R LT+ E R QGF D + G
Sbjct: 1024 S--RAFGRVKPSDPMHTITTKSQPSDSSIGKILHWNQNRPLTVMEARRAQGFRDNDIILG 1081
>gi|420416221|ref|ZP_14915332.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
gi|393037667|gb|EJB38702.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
Length = 361
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L +++V++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEVVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNIQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 219 YQ---------------ALMRKDSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDDYIFYG 324
>gi|419418017|ref|ZP_13958382.1| cytosine specific DNA methyltransferase [Helicobacter pylori NCTC
11637 = CCUG 17874]
gi|384374926|gb|EIE30275.1| cytosine specific DNA methyltransferase [Helicobacter pylori NCTC
11637 = CCUG 17874]
Length = 355
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 139/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ LKP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKALKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q +R P LY+H+ + E++ I K +G LP
Sbjct: 219 YQALMR--------------KDSPK-LYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|374988544|ref|YP_004964039.1| DNA-cytosine methyltransferase [Streptomyces bingchenggensis BCW-1]
gi|297159196|gb|ADI08908.1| DNA-cytosine methyltransferase [Streptomyces bingchenggensis BCW-1]
Length = 664
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 146/349 (41%), Gaps = 83/349 (23%)
Query: 441 PLPGDVDFICGGPPCQGVS--GFNRFR----NPQAALEDIKNRQLLVFMDVIEYLKPKYV 494
P G +D + GGPPCQ S G ++ R + D++ ++DV++ +KP+ V
Sbjct: 107 PAKGKIDLVAGGPPCQPFSRAGRSKIRSLVEHHGRDAHDLRKELWSAYLDVVKRIKPRAV 166
Query: 495 LMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKK 554
LMENV D+ F+ R +L + Y T++ ++ A YG+PQ R R+ L +K
Sbjct: 167 LMENVPDMGLGDDFFVVRVIEQQLEELGYATQVRLVDAWRYGVPQHRKRLILLARNDIEK 226
Query: 555 LPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLP----LVTNNE 610
E+Q+ + E+ LS AI DLP + T
Sbjct: 227 F------------------EWQQEVTE---------EERTTLSHAIGDLPPLKVVPTERV 259
Query: 611 SEDERKYGTVA--RTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVC 668
E R Y T + ++EF K +R R ++ +++DH +V DD+E
Sbjct: 260 GERVRSYDTPSEDQSEFAKEMRKR-------------AKREVVFDHMTRRVRQDDWEIF- 305
Query: 669 CIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGR 728
SM+ L S + P+ ++ + T + +
Sbjct: 306 ---------------------------QSMDSDTLYS--EIAPEL-QRYSAEHFTDKYKK 335
Query: 729 LWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
L W+++ ++ +HP Q+R LT+RE AR+Q FPD ++ G
Sbjct: 336 LDWNDLSRSITAHIAKDGYWYIHPDQNRTLTVREAARIQTFPDRFRFAG 384
>gi|386748699|ref|YP_006221907.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
99-5656]
gi|384554941|gb|AFI06697.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
99-5656]
Length = 355
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 136/333 (40%), Gaps = 82/333 (24%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 73 INMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLISC 128
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
+ G+ + ++ YQ I+ A YG+PQ R R F+ GAR F
Sbjct: 129 AKGYFLEEIKAKFHALGYQLSYQILNAKDYGVPQSRERAFIVGARHFS------------ 176
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
+ +P K V + +AISDL + +NE E Y ++ +
Sbjct: 177 --------------FDFNCLEPL---KSVSVKEAISDLAYLNSNEGAFESSYLNPIQSNY 219
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
Q A M + LY+H+ + E++ I K +G LP L
Sbjct: 220 Q---------------ALMRKDSTRLYNHKATNHSQVALEKLKLINKEQGK--ECLPKNL 262
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QP 744
G Q +GRL W+++ T+ TR P
Sbjct: 263 HGK-------------------------------QQFKSTWGRLNWNKVSPTIDTRFDTP 291
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
N HP R +T RE AR+Q F D Y +G
Sbjct: 292 SNGTNSHPELHRSITPREAARIQSFSDSYIFYG 324
>gi|302900266|ref|XP_003048231.1| hypothetical protein NECHADRAFT_39810 [Nectria haematococca mpVI
77-13-4]
gi|256729163|gb|EEU42518.1| hypothetical protein NECHADRAFT_39810 [Nectria haematococca mpVI
77-13-4]
Length = 1354
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 155/369 (42%), Gaps = 62/369 (16%)
Query: 425 EKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FM 483
++L+ +G +N +PL GDVDFI GG PC GF+ N + + KN+ L+ F
Sbjct: 879 DELQRLAIQGEFANNVPLVGDVDFISGGSPC---PGFSLLTNDKTTITQRKNQSLVAAFG 935
Query: 484 DVIEYLKPKYVLMENVVDILKFSGGF---LARYAVGRLVSMDYQTRLGIMAAGSYGLPQF 540
I+ +P+Y L+ENV I++ + + +V + YQT + A + G PQ
Sbjct: 936 SFIDLYRPRYGLLENVPGIVQRKSNRDQDVFSQLICAIVGLGYQTHFFFLDASACGSPQR 995
Query: 541 RLRVFLWGARPFKKLPQYPLPTH------EIVARGVIPN--EFQEIIVAYANNQPCQLEK 592
R RVFL A P +LP+ P PTH G +P E I+ A P
Sbjct: 996 RARVFLAFAAPGHRLPRRPNPTHAHPPHTNSFGLGNLPTGEPMAERIIPSAT--PFDF-- 1051
Query: 593 GVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLY 652
V A +DLP V +++ + I H ++L + + L
Sbjct: 1052 -VSAQAATADLPPVYDSKPD--------------ICIPFPDHR-ISLGATRGLRNKIKLI 1095
Query: 653 DHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPD 712
RP+ +N + + P RK A GVL ER++ + D
Sbjct: 1096 PTRPYGMN---FAQAWYGPDRKKAGT----GVLT----------PAERLVFPA------D 1132
Query: 713 YAMKFEHQSS-TKPFGRLWWDEIVNTVVTRAQPH---NRILLHPSQDRVLTIRENARLQG 768
A + + +GR D ++ TVVT P N LH +DRVLTI E R QG
Sbjct: 1133 SASSLSRSNPWSNAYGRQRPDRLIETVVTSQSPSDAKNGRTLHWQEDRVLTIMEARRAQG 1192
Query: 769 FPDCYQLFG 777
F D + G
Sbjct: 1193 FRDHEVILG 1201
>gi|420408038|ref|ZP_14907197.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4216]
gi|393025523|gb|EJB26629.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4216]
Length = 355
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 219 YQ---------------ALMRKNSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|403413292|emb|CCL99992.1| predicted protein [Fibroporia radiculosa]
Length = 671
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 81/163 (49%), Gaps = 37/163 (22%)
Query: 440 LPLPGDVDFICGG------------------PPCQGVSGFNRFRNPQAALEDIKNRQLLV 481
+P PG+VDFI GG PPCQ SG N ++ +DI+N +
Sbjct: 247 MPKPGEVDFIYGGNYCAFILIDAIVICSFTGPPCQSFSGMNHYKRA----DDIRNTLVCN 302
Query: 482 FMDVIEYLKPKYVLMENVVDILKFS-----------GGF---LARYAVGRLVSMDYQTRL 527
+ +E+ +P Y L+ENV +L + GG + ++ + LVS+ YQ R
Sbjct: 303 MLSYVEFYQPLYFLLENVTGLLFYPLNGRQEGRAIVGGVKMGVVKFILRTLVSLGYQVRF 362
Query: 528 GIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGV 570
++ AG YG PQ R RV WGA+ LP++PLPTH RGV
Sbjct: 363 KVLQAGQYGSPQDRKRVIFWGAKQGLPLPEFPLPTHSF-PRGV 404
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 727 GRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQL 775
GR+ + T +T P + LLHP+Q R++T+RE AR QGFPD Y+
Sbjct: 567 GRIDENGFFGTALTTVMPTGQCGKLLHPNQKRIVTVRECARAQGFPDWYEF 617
>gi|387781756|ref|YP_005792469.1| cytosine-methyltransferase [Helicobacter pylori 51]
gi|261837515|gb|ACX97281.1| cytosine-methyltransferase [Helicobacter pylori 51]
Length = 355
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 139/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ LKP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKALKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q +R P LY+H+ + E++ I K +G LP
Sbjct: 219 YQALMR--------------KDSPK-LYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W+++ T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLSWNKVSPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|420429703|ref|ZP_14928733.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-20]
gi|393048322|gb|EJB49289.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-20]
Length = 361
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNIQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 219 YQ---------------ALMRKDSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|393230538|gb|EJD38142.1| S-adenosyl-L-methionine-dependent methyltransferase [Auricularia
delicata TFB-10046 SS5]
Length = 710
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 162/394 (41%), Gaps = 91/394 (23%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
G +D IC GPPCQG S N R +D KN +L + ++E+++P+Y+++ENVV I+
Sbjct: 293 GHIDVICAGPPCQGHSTLNSHRT----ADDPKNCLILTALSLVEHIRPRYLVIENVVMIM 348
Query: 504 KF-----------------SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFL 546
+ GG ++ L+ + YQ R+G++ AG +G PQ R R FL
Sbjct: 349 GWRLMAEQRGQGIIRGGETHGGIFLITSI--LLRLGYQVRIGLLNAGMHGTPQNRRRFFL 406
Query: 547 WGARPFKKL-----PQYPLPTHEIVARGVIP--------NEFQEIIVAYANNQP--CQLE 591
A P L P + P + + P ++ +E + P C
Sbjct: 407 IAAEPGSTLPDFPHPTHAFPKAKTLKMAPFPTAQPGWPVDDGEEAVGDDEMRLPPLCVPH 466
Query: 592 KGVLLSDAISDL--------PLVTNNESE---DERK---------YGTVARTEFQKYIRL 631
+ + DAI DL P +N D +K Y A +EFQ +R
Sbjct: 467 PKITVGDAIGDLKGYNWKRNPERQHNAPSFPCDLKKGCNPNMPNAYARNAASEFQ--VRA 524
Query: 632 RRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNK 691
R + V +S+ Q+ V E + N D+P G D
Sbjct: 525 RENTEV-MSAKQLQ------------HVTAGFKEYIV-------RNVWDIPIRADGEDEN 564
Query: 692 VR---W---DPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPH 745
R W DP R P + + + + RL + T+VT +P
Sbjct: 565 ARNPGWTAIDPDSRRAQYGLADPT---SHVSRDGMREGRYYRRLKMNGHFATLVTNVRPT 621
Query: 746 NRI--LLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ +LHP+Q+R++++RE AR QGFPD ++ G
Sbjct: 622 AKQSQVLHPNQNRLVSVREQARAQGFPDDFKFVG 655
>gi|420426239|ref|ZP_14925295.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-9]
gi|393044959|gb|EJB45949.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-9]
Length = 355
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 139/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNIQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q +R P LY+H+ + E++ I K +G LP
Sbjct: 219 YQALMR--------------KDSPK-LYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPKLHRSITPREAARIQSFSDNYIFYG 324
>gi|421716108|ref|ZP_16155420.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R037c]
gi|407222006|gb|EKE91809.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R037c]
Length = 355
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 219 YQ---------------ALMRKNSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|385221554|ref|YP_005770687.1| cytosine specific DNA methyltransferase [Helicobacter pylori
SouthAfrica7]
gi|317010333|gb|ADU84080.1| cytosine specific DNA methyltransferase [Helicobacter pylori
SouthAfrica7]
Length = 361
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQSRERAFIVGATHFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + +AISDL + +NE E Y ++
Sbjct: 178 ---------DFDLL-------EPSQ---SVSVQEAISDLAYLHSNEGAFESDYLNPIQSN 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 219 YQ---------------ALMRKNSPKLYNHQATNHSQSALEKLKLIDKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLSWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRFITPREAARIQSFSDDYIFYG 324
>gi|420490054|ref|ZP_14988640.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-13]
gi|420523894|ref|ZP_15022304.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-13b]
gi|393109397|gb|EJC09928.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-13]
gi|393133053|gb|EJC33470.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-13b]
Length = 361
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNIQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 219 YQ---------------ALMRKDSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDDYIFYG 324
>gi|420461148|ref|ZP_14959943.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-27]
gi|393074722|gb|EJB75481.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-27]
Length = 355
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 139/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q +R P LY+H+ + E++ I K +G LP
Sbjct: 219 YQALMR--------------KDSPK-LYNHQATNHSQAALEKLKLINKERGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|339321213|ref|YP_004683735.1| adenine-specific DNA-methyltransferase [Mycoplasma bovis Hubei-1]
gi|392430292|ref|YP_006471337.1| DNA methyltransferase [Mycoplasma bovis HB0801]
gi|338227338|gb|AEI90400.1| adenine-specific DNA-methyltransferase [Mycoplasma bovis Hubei-1]
Length = 593
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 135/339 (39%), Gaps = 87/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
++ I GGPPCQG S + + L+D +N L ++D++E + P+ ++ENV +L
Sbjct: 74 INMIIGGPPCQGFSN----KGKKQGLDDPRNFLFLEYLDIVEKVSPELFIIENVKTMLIA 129
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
G+ V ++ M Y+ G++ A +G+PQ R R
Sbjct: 130 VKGYFIDQIVEKIEMMGYKISYGVLNAKDFGVPQNRARAI-------------------- 169
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
+I ++ + I + +N ++ DAISDL + + + E +Y + A++E+
Sbjct: 170 ----IIAHKEKTISLPRSNGNRTTVK------DAISDLAYLNSADGNYESQYISNAQSEY 219
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANF--RDLPG 683
QK QM L++H + N D +++ IP G + +L G
Sbjct: 220 QK---------------QMRKGSLRLFNHIATKHNADVIKKLNLIPAECGKEYLSEELKG 264
Query: 684 VLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA- 742
Q +GRL WD T+ TR
Sbjct: 265 -----------------------------------KQKFNTTWGRLKWDSTSPTIDTRFD 289
Query: 743 QPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKE 781
P N HP +R +T RE ARLQ FPD + G E
Sbjct: 290 TPSNGTNTHPELNRAITPREAARLQSFPDKFIFTGSKTE 328
>gi|396578258|gb|AFM52076.2| DNA methyltransferase [Mycoplasma bovis HB0801]
Length = 594
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 135/339 (39%), Gaps = 87/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
++ I GGPPCQG S + + L+D +N L ++D++E + P+ ++ENV +L
Sbjct: 75 INMIIGGPPCQGFSN----KGKKQGLDDPRNFLFLEYLDIVEKVSPELFIIENVKTMLIA 130
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
G+ V ++ M Y+ G++ A +G+PQ R R
Sbjct: 131 VKGYFIDQIVEKIEMMGYKISYGVLNAKDFGVPQNRARAI-------------------- 170
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
+I ++ + I + +N ++ DAISDL + + + E +Y + A++E+
Sbjct: 171 ----IIAHKEKTISLPRSNGNRTTVK------DAISDLAYLNSADGNYESQYISNAQSEY 220
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANF--RDLPG 683
QK QM L++H + N D +++ IP G + +L G
Sbjct: 221 QK---------------QMRKGSLRLFNHIATKHNADVIKKLNLIPAECGKEYLSEELKG 265
Query: 684 VLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA- 742
Q +GRL WD T+ TR
Sbjct: 266 -----------------------------------KQKFNTTWGRLKWDSTSPTIDTRFD 290
Query: 743 QPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKE 781
P N HP +R +T RE ARLQ FPD + G E
Sbjct: 291 TPSNGTNTHPELNRAITPREAARLQSFPDKFIFTGSKTE 329
>gi|425788683|ref|YP_007016603.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Aklavik117]
gi|425626998|gb|AFX90466.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Aklavik117]
Length = 355
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 139/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ LKP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKALKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q +R P LY+H+ + E++ I K +G LP
Sbjct: 219 YQALMR--------------KDSPK-LYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W+++ T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKVSPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|425791505|ref|YP_007019422.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Aklavik86]
gi|425629820|gb|AFX90360.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Aklavik86]
Length = 355
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 139/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ LKP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKALKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q +R P LY+H+ + E++ I K +G LP
Sbjct: 219 YQALMR--------------KDSPK-LYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W+++ T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKVSPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|15644682|ref|NP_206852.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
26695]
gi|410023283|ref|YP_006892536.1| cytosine specific DNA methyltransferase [Helicobacter pylori Rif1]
gi|410501052|ref|YP_006935579.1| cytosine specific DNA methyltransferase [Helicobacter pylori Rif2]
gi|410681569|ref|YP_006933971.1| cytosine specific DNA methyltransferase [Helicobacter pylori 26695]
gi|419416152|ref|ZP_13956734.1| cytosine specific DNA methyltransferase [Helicobacter pylori P79]
gi|2313124|gb|AAD07117.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
26695]
gi|384375626|gb|EIE30896.1| cytosine specific DNA methyltransferase [Helicobacter pylori P79]
gi|409893210|gb|AFV41268.1| cytosine specific DNA methyltransferase [Helicobacter pylori 26695]
gi|409894940|gb|AFV42862.1| cytosine specific DNA methyltransferase [Helicobacter pylori Rif1]
gi|409896603|gb|AFV44457.1| cytosine specific DNA methyltransferase [Helicobacter pylori Rif2]
Length = 355
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 219 YQ---------------ALMRKDSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|217032842|ref|ZP_03438321.1| hypothetical protein HPB128_165g1 [Helicobacter pylori B128]
gi|298737011|ref|YP_003729541.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
gi|216945425|gb|EEC24089.1| hypothetical protein HPB128_165g1 [Helicobacter pylori B128]
gi|298356205|emb|CBI67077.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
Length = 361
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 137/333 (41%), Gaps = 82/333 (24%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 73 INMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLISC 128
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 129 AKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF----------- 177
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
+F + +P Q V + DAISDL + +NE E Y ++ +
Sbjct: 178 --------DFNLL-------EPSQ---SVNIQDAISDLAYLCSNEGAFESDYLNPIQSSY 219
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
Q A M LY+H+ + E++ I K +G LP L
Sbjct: 220 Q---------------ALMRKNSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKNL 262
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QP 744
G Q +GRL W++I T+ TR P
Sbjct: 263 HG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDTP 291
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
N HP R +T RE AR+Q F D Y +G
Sbjct: 292 SNGTNSHPELHRSITPREAARIQSFSDDYIFYG 324
>gi|384887098|ref|YP_005761609.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
52]
gi|261838928|gb|ACX98693.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
52]
Length = 355
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 140/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 219 YQ---------------ALMRKNSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G R KS +GRL W+++ T+ TR
Sbjct: 262 LHG------------RQQFKS-------------------TWGRLNWNKVSPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|387907427|ref|YP_006337761.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
XZ274]
gi|387572362|gb|AFJ81070.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
XZ274]
Length = 355
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 138/333 (41%), Gaps = 82/333 (24%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
++ I GGPPCQG S N+ +N L+D +N L ++++++ LKP+ ++ENV +++
Sbjct: 73 INMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISC 128
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 129 AKGYFLEEIKERLNALGYQVSYQILNAKDYGVPQNRERAFVVGASRFSF----------- 177
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
+F + +P Q V + DAISDL + +NE E Y ++ +
Sbjct: 178 --------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSSY 219
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
Q +R P LY+H+ + E++ I K +G LP L
Sbjct: 220 QALMR--------------KDSPK-LYNHQATNHSQAALEKLKLINKEQGK--ECLPKNL 262
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QP 744
G Q +GRL W+++ T+ TR P
Sbjct: 263 HG-------------------------------KQQFKSTWGRLSWNKVSPTIDTRFDTP 291
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
N HP R +T RE AR+Q F D Y +G
Sbjct: 292 SNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|420454595|ref|ZP_14953425.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-14]
gi|393072945|gb|EJB73719.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-14]
Length = 281
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 135/331 (40%), Gaps = 82/331 (24%)
Query: 448 FICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSG 507
I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +I+ +
Sbjct: 1 MIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNIISCAK 56
Query: 508 GFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVA 567
G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFNF------------- 103
Query: 568 RGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQK 627
+F + +P Q V + DAISDL + +NE E Y ++ +Q
Sbjct: 104 ------DFNLL-------EPSQ---SVNIQDAISDLAYLCSNEGAFESDYLNPIQSSYQ- 146
Query: 628 YIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVG 687
A M LY+H+ + E++ I K +G LP L G
Sbjct: 147 --------------ALMRKDSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKNLHG 190
Query: 688 PDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QPHN 746
Q +GRL W++I T+ TR P N
Sbjct: 191 -------------------------------KQQFKSTWGRLNWNKISPTIDTRFDTPSN 219
Query: 747 RILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
HP R +T RE AR+Q F D Y +G
Sbjct: 220 GTNSHPELHRSITPREAARIQSFSDNYIFYG 250
>gi|17225496|gb|AAL37432.1|AF328909_1 putative cytosine-specific DNA methyltransferase [Helicobacter
pylori]
gi|17225522|gb|AAL37451.1|AF328916_1 cytosine-specific DNA methyltransferase [Helicobacter pylori]
Length = 361
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 219 YQ---------------ALMRKDSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDDYIFYG 324
>gi|448549957|ref|ZP_21628562.1| DNA-cytosine methyltransferase [Haloferax sp. ATCC BAA-645]
gi|445713005|gb|ELZ64786.1| DNA-cytosine methyltransferase [Haloferax sp. ATCC BAA-645]
Length = 416
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 146/344 (42%), Gaps = 57/344 (16%)
Query: 443 PGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDI 502
P DVD I GGPPCQG S R +ED +N F++ + + +P + +MENVV +
Sbjct: 69 PDDVDVIVGGPPCQGFSSIRPDRGDD--VEDERNGLYSDFIEYVSHYEPDFFIMENVVGL 126
Query: 503 LKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
G + ++ Y I+ ++GLPQ R R+ + GA + + ++P PT
Sbjct: 127 ATHEDGDTISQILEDAKNIGYSADWRILNGANFGLPQRRERLIMIGAADEQDI-EFPEPT 185
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPC--------QLEKGVLLSDAISDLPLVTNNESEDE 614
H+ R + + ++I QP L + + DAI DLP + E E
Sbjct: 186 HQANGRTIGYRDKTKVITT----QPTLSNFRDAEALPEARTIMDAIGDLPKLEAGEEAIE 241
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
Y + +Q +R Q + R +L H+ N+ D + I +
Sbjct: 242 --YTEPPQNRYQAALR------------QGSERLTL---HK--ATNHGD--NMMTIIRNS 280
Query: 675 GANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWD-E 733
G N + ++E + V +Y +K + SS + RL D
Sbjct: 281 GPNKQ----------------TTIENLKESDEVDDVENY-IKTGYSSS---YSRLDADLP 320
Query: 734 IVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
V V P + +HP+QDR LT RE AR+Q FPD ++ FG
Sbjct: 321 SVTMTVNFIHPASNKCIHPNQDRALTPREGARIQSFPDTFEFFG 364
>gi|325679553|ref|ZP_08159133.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8]
gi|324108840|gb|EGC03076.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8]
Length = 708
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 130/335 (38%), Gaps = 84/335 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
V+ + GGPPCQG S + + L D +N L +++++ + P+ ++ENV +L
Sbjct: 419 VNMVIGGPPCQGFS----LKGKKLGLNDPRNFLFLEYLNIVSEINPQVFIIENVKALLST 474
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP-QYPLPTHE 564
S G+ V R+ M Y R G++ + YG+PQ R R + K +P + P PT +
Sbjct: 475 SAGWFKDQIVQRVEEMGYTVRYGVLNSADYGVPQLRQRAIFICS---KDIPIELPKPTAK 531
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
V + DAI DL + + E E+ Y T ++
Sbjct: 532 KVTT---------------------------VRDAIFDLAYLNSGEGAFEQDYTTQPSSD 564
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q +M LY+H+ +++ IP G + LP
Sbjct: 565 YQ---------------TKMRKGAKKLYNHKASNHAEIAIKKLSLIPPECGKEY--LPED 607
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQP 744
++G Q + +GRL WDE T+ TR
Sbjct: 608 MIG-------------------------------KQQFSGTWGRLKWDEPSPTIDTRFDA 636
Query: 745 -HNRILLHPSQDRVLTIRENARLQGFPDCYQLFGP 778
N HP +R +T RE ARLQ F D + GP
Sbjct: 637 SSNGTNNHPFLNRAITPREAARLQSFDDKFVFIGP 671
>gi|448542558|ref|ZP_21624720.1| DNA-cytosine methyltransferase [Haloferax sp. ATCC BAA-646]
gi|445707037|gb|ELZ58903.1| DNA-cytosine methyltransferase [Haloferax sp. ATCC BAA-646]
Length = 368
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 146/344 (42%), Gaps = 57/344 (16%)
Query: 443 PGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDI 502
P DVD I GGPPCQG S R +ED +N F++ + + +P + +MENVV +
Sbjct: 21 PDDVDVIVGGPPCQGFSSIRPDRGDD--VEDERNGLYSDFIEYVSHYEPDFFIMENVVGL 78
Query: 503 LKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
G + ++ Y I+ ++GLPQ R R+ + GA + + ++P PT
Sbjct: 79 ATHEDGDTISQILEDAKNIGYSADWRILNGANFGLPQRRERLIMIGAADEQDI-EFPEPT 137
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPC--------QLEKGVLLSDAISDLPLVTNNESEDE 614
H+ R + + ++I QP L + + DAI DLP + E E
Sbjct: 138 HQANGRTIGYRDKTKVITT----QPTLSNFRDAEALPEARTIMDAIGDLPKLEAGEEAIE 193
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
Y + +Q +R Q + R +L H+ N+ D + I +
Sbjct: 194 --YTEPPQNRYQAALR------------QGSERLTL---HK--ATNHGD--NMMTIIRNS 232
Query: 675 GANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWD-E 733
G N + ++E + V +Y +K + SS + RL D
Sbjct: 233 GPNKQ----------------TTIENLKESDEVDDVENY-IKTGYSSS---YSRLDADLP 272
Query: 734 IVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
V V P + +HP+QDR LT RE AR+Q FPD ++ FG
Sbjct: 273 SVTMTVNFIHPASNKCIHPNQDRALTPREGARIQSFPDTFEFFG 316
>gi|108562472|ref|YP_626788.1| cytosine specific DNA methyltransferase [Helicobacter pylori HPAG1]
gi|107836245|gb|ABF84114.1| cytosine specific DNA methyltransferase [Helicobacter pylori HPAG1]
Length = 355
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F+ + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFKLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNHIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 219 YQ---------------ALMRKNSPKLYNHKATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +G L W++I T+ TR
Sbjct: 262 LHGK-------------------------------QQFKSTWGHLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDDYIFYG 324
>gi|308183851|ref|YP_003927984.1| cytosine specific DNA methyltransferase [Helicobacter pylori
SJM180]
gi|308059771|gb|ADO01667.1| cytosine specific DNA methyltransferase [Helicobacter pylori
SJM180]
Length = 355
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L +++V++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEVVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CTKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + +AISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNIQEAISDLAYLCSNEGAFESDYLNPIQSN 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 219 YQ---------------ALMRKDSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|427717809|ref|YP_007065803.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 7507]
gi|427350245|gb|AFY32969.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 7507]
Length = 413
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 150/364 (41%), Gaps = 63/364 (17%)
Query: 420 LSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQL 479
++ ++ +++F T +I D+ + GGPPCQG F+ Q +D +N
Sbjct: 50 MTVIQQDIRDFSTASSIKDICLFKPDI--VIGGPPCQG---FSIAGPAQKDPKDPRNSLF 104
Query: 480 LVFMDVIEYLKPKYVLMENVVDILK---FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYG 536
+ F I +L+P+ ++ENV +L F G + + Y + ++ A YG
Sbjct: 105 INFAHWICFLQPRAFVIENVKGLLSRKNFEGIKVIDIIQKTFEDLGYFVEVWLLNAAEYG 164
Query: 537 LPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLL 596
+PQ R R+F+ G + KKL P TH + ++ N Q ++ N P + +
Sbjct: 165 VPQIRERIFVVGNKMGKKL-GIPPKTHSLDL--LLTNSSQLSVLKNMNLLP-----SLSV 216
Query: 597 SDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRP 656
DAISDLP + E ++E+ Y + +Q +IR H + N + + + R + H
Sbjct: 217 WDAISDLPSLNAREGKEEQPYISKPHNNYQHWIRNSSHTLYNHVAMEHSQRLVERFKHIK 276
Query: 657 FQVNNDDYERVCCIPKRKGANFRDLPGVLVGPD---NKVRWDPSMERVMLKSGKPLVPDY 713
+ ++ D +PK A R G L G N R +P+ K + +
Sbjct: 277 WGESSSD------VPKEHRARLRSGNGELSGKSYDQNNRRLNPN------KPSHTIAASF 324
Query: 714 AMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCY 773
F +HP Q R LT RE AR+Q FPD Y
Sbjct: 325 YANF--------------------------------IHPFQHRNLTAREGARIQSFPDTY 352
Query: 774 QLFG 777
+ G
Sbjct: 353 RFLG 356
>gi|153814224|ref|ZP_01966892.1| hypothetical protein RUMTOR_00433 [Ruminococcus torques ATCC 27756]
gi|145848620|gb|EDK25538.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus torques ATCC
27756]
Length = 702
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 126/333 (37%), Gaps = 82/333 (24%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
V+ I GGPPCQG S + + L+D +N ++ +E LKP+ ++ENV +L
Sbjct: 420 VNMIIGGPPCQGFS----LKGKKLGLDDPRNFLFNEYLRFVEILKPEVFVIENVKALLST 475
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
S G+ + ++ M Y G++ A +G+PQ R R + K PLP
Sbjct: 476 SAGWFKDQIIKKVTEMGYHVEYGVLTASDFGVPQARQRAIFICS----KNKSIPLPA--- 528
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
E V + DAI DL + + E E E+ Y T +E+
Sbjct: 529 ----------------------ATCETPVTVRDAIYDLAYLNSGEGEFEQDYITEPSSEY 566
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
QK QM LY+H+ +++ IP G LP +
Sbjct: 567 QK---------------QMRRGSKKLYNHKASNHAAIAIKKLEMIPPECGK--EHLPSDM 609
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQP- 744
VG +Q + +GRL WD + T+ TR
Sbjct: 610 VG-------------------------------NQQFSGTWGRLKWDAVSPTIDTRFDAS 638
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
N HP R +T RE AR+Q F D + G
Sbjct: 639 SNGTNNHPFLHRAITPREAARIQSFDDKFVFIG 671
>gi|448668261|ref|ZP_21686392.1| DNA-cytosine methyltransferase [Haloarcula amylolytica JCM 13557]
gi|445768343|gb|EMA19428.1| DNA-cytosine methyltransferase [Haloarcula amylolytica JCM 13557]
Length = 343
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 137/345 (39%), Gaps = 69/345 (20%)
Query: 448 FICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSG 507
I GGPPC+G S R +A ED +N F++ +++ +P + +MENVV + +
Sbjct: 1 MIVGGPPCKGFSSIRPDRGTEA--EDERNGLYTDFVNYVDFFEPDFFIMENVVGLATHND 58
Query: 508 GFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVA 567
G + + + + Y I+ ++GLPQ R R+ + G+ ++ ++P PTH+
Sbjct: 59 GITIQKIIDSVRDIGYSADWRIVNGANFGLPQRRERLIMIGSGD-DRVIEFPRPTHQANG 117
Query: 568 RGVIPNEFQEIIVAYAN----NQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVART 623
R + + ++I A L +G + DAI DLP + E E Y A+
Sbjct: 118 RTIGYKDESKVITAQPTLDNFRAGTSLPEGRTIMDAIDDLPELEAGEEVTE--YTKPAQN 175
Query: 624 EFQKYIR-----LRRHDVVNLSSAQMA----SRPSLLYDHRPFQVNN--DDYERVCCIPK 672
E+Q+ +R L H S M S P+ Q ++ DD E
Sbjct: 176 EYQETMRKNSNELSLHKATKHQSKMMTIIRHSGPNKEATIENLQASDEVDDVEDYISSGY 235
Query: 673 RKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWD 732
+ R DP + V + M F H +S K
Sbjct: 236 SS---------------SYSRLDPDLPSVTI----------TMNFIHPASNK-------- 262
Query: 733 EIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+HP QDR LT RE AR+Q FPD ++ G
Sbjct: 263 ----------------CIHPYQDRALTPREGARIQSFPDDFEFVG 291
>gi|308182232|ref|YP_003926359.1| cytosine specific DNA methyltransferase [Helicobacter pylori
PeCan4]
gi|308064417|gb|ADO06309.1| cytosine specific DNA methyltransferase [Helicobacter pylori
PeCan4]
Length = 281
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 135/331 (40%), Gaps = 82/331 (24%)
Query: 448 FICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSG 507
I GGPPCQG S N+ +N L+D +N L ++++++ LKP+ ++ENV +++ +
Sbjct: 1 MIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISCAK 56
Query: 508 GFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVA 567
G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF------------- 103
Query: 568 RGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQK 627
+F + +P Q V + DAISDL + +NE E Y ++ +Q
Sbjct: 104 ------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQ- 146
Query: 628 YIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVG 687
A M LY+H+ + E++ I K +G LP L G
Sbjct: 147 --------------ALMRKNSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKNLHG 190
Query: 688 PDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QPHN 746
Q +GRL W+++ T+ TR P N
Sbjct: 191 -------------------------------KQQFKSTWGRLNWNKVSPTIDTRFDTPSN 219
Query: 747 RILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
HP R +T RE AR+Q F D Y +G
Sbjct: 220 GTNSHPELHRSITPREAARIQSFSDNYIFYG 250
>gi|421713626|ref|ZP_16152957.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R32b]
gi|407216992|gb|EKE86829.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R32b]
Length = 355
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 137/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ + A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQTLNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 219 YQ---------------ALMRKNSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|384893666|ref|YP_005767715.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Sat464]
gi|308062920|gb|ADO04807.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Sat464]
Length = 355
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 139/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVDVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q +R P LY+H+ + E++ I K +G LP
Sbjct: 219 YQALMR--------------KDSPK-LYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W+++ T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKVSPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|2952287|gb|AAC05489.1| chromomethylase [Quercus palustris]
Length = 62
Score = 94.4 bits (233), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/61 (63%), Positives = 55/61 (90%)
Query: 459 SGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRL 518
SGFNRFRN + L+D KN+QL+V+M+++++LKP+YVLMENVVD++KF+ GFL RYA+GRL
Sbjct: 1 SGFNRFRNKENPLDDEKNKQLIVYMNLVQHLKPRYVLMENVVDLVKFANGFLGRYALGRL 60
Query: 519 V 519
+
Sbjct: 61 I 61
>gi|420501970|ref|ZP_15000511.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-41]
gi|393153250|gb|EJC53543.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-41]
Length = 355
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + +AISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNIQEAISDLAYLCSNEGSFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 219 YQ---------------ALMRKDSPKLYNHQATNHSQAALEKLKLIDKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDDYIFYG 324
>gi|420464739|ref|ZP_14963506.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-6]
gi|393082226|gb|EJB82942.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-6]
Length = 361
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 139/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+V+ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EVNMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + +AISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNIQEAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q +R P LY+H+ + E++ I K +G LP
Sbjct: 219 YQALMR--------------KDSPK-LYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDDYIFYG 324
>gi|420461335|ref|ZP_14960126.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-3]
gi|393081851|gb|EJB82569.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-3]
Length = 355
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + +AISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNVQEAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 219 YQ---------------ALMRKNSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|420480059|ref|ZP_14978703.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1]
gi|420510504|ref|ZP_15008994.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1b]
gi|393097972|gb|EJB98564.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1]
gi|393122245|gb|EJC22722.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1b]
Length = 361
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 139/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + +AISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNIQEAISDLAYLCSNEGAFESDYLNPVQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q +R P LY+H+ + E++ I K +G LP
Sbjct: 219 YQALMR--------------KDSPK-LYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDDYIFYG 324
>gi|228478395|ref|ZP_04063003.1| modification methylase HaeIII [Streptococcus salivarius SK126]
gi|228250074|gb|EEK09344.1| modification methylase HaeIII [Streptococcus salivarius SK126]
Length = 387
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 146/354 (41%), Gaps = 91/354 (25%)
Query: 443 PGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDI 502
P VD + GGPPCQ S + + + A + R++L F ++PK + ENV +
Sbjct: 78 PKGVDLVIGGPPCQSFSTVGKRQYDKRAKMYREYRRILSF------IQPKMFVFENVYGL 131
Query: 503 LKFSG------------GFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR 550
L F + G + + T+L + A +G+PQ R RVFL G R
Sbjct: 132 LTMKNEQNGPIIRNVKESFNDLSSFGDVSGYNVYTKL--INAKDFGVPQNRERVFLIGVR 189
Query: 551 PFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNE 610
K L +I + + P E L + L DAISDLP++ NN
Sbjct: 190 --KDL--------KIKSEWIFPEE-------------TSLNNEITLRDAISDLPILGNN- 225
Query: 611 SEDERKYGTVA--RTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVC 668
E+KY + +TE+Q +R + D++N V+ + ER+
Sbjct: 226 ---EQKYNYICEPKTEYQALLRGNQTDLLN-------------------HVSRNHGERLQ 263
Query: 669 CIPKRKGANFRDLPGVLVGPDNKVRWDPSM-ERVMLKSGKPLVPDYAMKFEHQSSTKPFG 727
I + G G NK+ D + + + L SG +G
Sbjct: 264 KIMRALGE------GQGKSDINKMVEDGELGQDLYLTSG---------------YNNTYG 302
Query: 728 RLWWDEIVNTVVTR-AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVK 780
RLWWD T+ + P + +HP Q+R LT RE AR+Q FPD Y+ G ++
Sbjct: 303 RLWWDRPSTTITNNLSTPSSLRCIHPEQNRALTAREGARIQSFPDNYKFVGGLQ 356
>gi|449085225|gb|AGE84599.1| cytosine DNA methyltransferase [Helicobacter pylori]
Length = 356
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 137/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I G PPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +I+
Sbjct: 72 EINMIIGRPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNIIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 219 YQ---------------ALMRKNSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITSREAARIQSFSDNYIFYG 324
>gi|317127844|ref|YP_004094126.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522]
gi|315472792|gb|ADU29395.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522]
Length = 360
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 141/341 (41%), Gaps = 79/341 (23%)
Query: 439 ILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMEN 498
+ L GD+D I GGPPCQG S NR+ Q + D +N+ ++ +E PK VL+EN
Sbjct: 65 MFDLTGDIDVIVGGPPCQGFSSANRW---QKEMADPRNKLFYEYIRFVEVFMPKVVLIEN 121
Query: 499 VVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQY 558
V IL G+ + L ++ Y ++ A +G+PQ RLR F R K +PQ
Sbjct: 122 VRGILTRDNGYARKKIYSILENLGYIVDSAVLDASEFGVPQKRLRAFFIATR--KDIPQ- 178
Query: 559 PLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYG 618
I +P VL+ DA+ +L + ++ Y
Sbjct: 179 -------------------ITFDKLKKKPI-----VLVKDALGELYELEEQMGKNRSNYF 214
Query: 619 TVAR--TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGA 676
++ + ++KY+R ++ + N + Y P ++ D R+ C+P+ G
Sbjct: 215 LSSKPDSSYRKYLRNSKNSIEN---------HEIRY---PAKIQQD---RIACVPQ--GG 257
Query: 677 NFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVN 736
N+RD+P P+N+ K H S+ K +E V+
Sbjct: 258 NWRDIPESYF-PNNR------------------------KNRHSSAYKRLD----EEDVS 288
Query: 737 TVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ H+ H R+ T+RE ARLQ F D + +G
Sbjct: 289 VTIDTGNAHSN-YFHTIFHRIPTVREAARLQSFNDDFIFYG 328
>gi|386745575|ref|YP_006218792.1| cytosine specific DNA methyltransferase [Helicobacter pylori
HUP-B14]
gi|384551824|gb|AFI06772.1| cytosine specific DNA methyltransferase [Helicobacter pylori
HUP-B14]
Length = 650
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 135/334 (40%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S + L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 367 EINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 422
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 423 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 472
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 473 ---------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 513
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 514 YQ---------------ALMRKDSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 556
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 557 LHGK-------------------------------QQFKSTWGRLNWNKISPTIDTRFDT 585
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 586 PSNGTNSHPELHRSITPREAARIQSFSDDYIFYG 619
>gi|218134306|ref|ZP_03463110.1| hypothetical protein BACPEC_02199 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991681|gb|EEC57687.1| DNA (cytosine-5-)-methyltransferase [[Bacteroides] pectinophilus
ATCC 43243]
Length = 622
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 126/333 (37%), Gaps = 82/333 (24%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
V+ I GGPPCQG S + + L+D +N ++ +E LKP+ ++ENV +L
Sbjct: 340 VNMIIGGPPCQGFS----LKGKKLGLDDPRNFLFNEYLRFVEILKPEVFVIENVKALLST 395
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
S G+ + ++ M Y G++ A +G+PQ R R + K PLP
Sbjct: 396 SAGWFKDQIIKKVTEMGYHVEYGVLTASDFGVPQARQRAIFICS----KNKSIPLPA--- 448
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
E V + DAI DL + + E E E+ Y T +E+
Sbjct: 449 ----------------------ATCETPVTVRDAIYDLAYLNSGEGEFEQDYITEPSSEY 486
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
QK QM LY+H+ +++ IP G LP +
Sbjct: 487 QK---------------QMRRGSKKLYNHKASNHAAIAIKKLEMIPPECGK--EHLPSDM 529
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQP- 744
VG +Q + +GRL WD + T+ TR
Sbjct: 530 VG-------------------------------NQQFSGTWGRLKWDAVSPTIDTRFDAS 558
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
N HP R +T RE AR+Q F D + G
Sbjct: 559 SNGTNNHPFLHRAITPREAARIQSFDDKFVFIG 591
>gi|420424632|ref|ZP_14923696.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-5]
gi|393043219|gb|EJB44223.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-5]
Length = 361
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + +AISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNIQEAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 219 YQ---------------ALMRKDSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|420448068|ref|ZP_14946952.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-44]
gi|393066881|gb|EJB67699.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-44]
Length = 355
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNIQDAISDLAYLCSNEGSFESDYLNPIQSN 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + +++ I K +G LP
Sbjct: 219 YQ---------------ALMRKDSPKLYNHQATNHSQAALKKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDDYIFYG 324
>gi|403417903|emb|CCM04603.1| predicted protein [Fibroporia radiculosa]
Length = 1212
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 86/181 (47%), Gaps = 21/181 (11%)
Query: 441 PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVV 500
P PG +D I G PCQ S N F+ D K+ +L + I++L+PKY +ENV
Sbjct: 838 PKPGQIDCIVAGFPCQPHSRLNMFQRAN----DRKSHLILNLLSWIDFLRPKYCFLENVR 893
Query: 501 DILKFS------------GGFLA---RYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVF 545
L +S GG ++ + L++M+YQ R+G++ A YG PQ R+R F
Sbjct: 894 GFLSYSLNATQAGRYRVEGGIAMGGLKFVIHALLAMNYQVRMGLLQAAHYGTPQTRVRFF 953
Query: 546 LWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLE--KGVLLSDAISDL 603
L AR LP P PTH + + + +A L K + + DAISDL
Sbjct: 954 LIAARHSYLLPSMPQPTHSFPVKDALALKLTNGGMALPVLTGSGLAPFKYISIDDAISDL 1013
Query: 604 P 604
P
Sbjct: 1014 P 1014
>gi|420486671|ref|ZP_14985279.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|420520558|ref|ZP_15018989.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-8b]
gi|393104224|gb|EJC04781.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|393127145|gb|EJC27590.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-8b]
Length = 361
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + +AISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNIQEAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 219 YQ---------------ALMRKDSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDDYIFYG 324
>gi|17225517|gb|AAL37447.1|AF328915_1 cytosine-specific DNA methyltransferase [Helicobacter pylori]
Length = 361
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNIQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q +R P LY+H+ + E++ I K +G LP
Sbjct: 219 YQALMR--------------KDSPK-LYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE R+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREATRIQSFSDDYIFYG 324
>gi|386753565|ref|YP_006226783.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi112]
gi|384559823|gb|AFI00290.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi112]
Length = 281
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 135/331 (40%), Gaps = 82/331 (24%)
Query: 448 FICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSG 507
I GGPPCQG S N+ +N L+D +N L ++++++ LKP+ ++ENV +++ +
Sbjct: 1 MIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISCAK 56
Query: 508 GFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVA 567
G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF------------- 103
Query: 568 RGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQK 627
+F + +P Q V + DAISDL + +NE E Y ++ +Q
Sbjct: 104 ------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQ- 146
Query: 628 YIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVG 687
A M LY+H+ + E++ I K +G LP L G
Sbjct: 147 --------------ALMRKDSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKNLHG 190
Query: 688 PDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QPHN 746
Q +GRL W+++ T+ TR P N
Sbjct: 191 -------------------------------KQQFKSTWGRLNWNKVSPTIDTRFDTPSN 219
Query: 747 RILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
HP R +T RE AR+Q F D Y +G
Sbjct: 220 GTNSHPELHRSITPREAARIQSFSDNYIFYG 250
>gi|420463026|ref|ZP_14961804.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-4]
gi|393080554|gb|EJB81279.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-4]
Length = 361
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + +AISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNIQEAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 219 YQ---------------ALMRKDSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDDYIFYG 324
>gi|385215328|ref|YP_005775284.1| cytosine specific DNA methyltransferase [Helicobacter pylori F32]
gi|317179856|dbj|BAJ57642.1| cytosine specific DNA methyltransferase [Helicobacter pylori F32]
Length = 281
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 136/331 (41%), Gaps = 82/331 (24%)
Query: 448 FICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSG 507
I GGPPCQG S N+ +N L+D +N L ++++++ LKP+ ++ENV +++ +
Sbjct: 1 MIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISCAK 56
Query: 508 GFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVA 567
G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF------------- 103
Query: 568 RGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQK 627
+F + +P Q V + DAISDL + +NE E Y ++ +Q
Sbjct: 104 ------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESNYLNPIQSSYQ- 146
Query: 628 YIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVG 687
A M LY+H+ + E++ I K +G LP L G
Sbjct: 147 --------------ALMRKDSPKLYNHQATNHSQVALEKLKLINKEQGK--ECLPKNLHG 190
Query: 688 PDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QPHN 746
Q +GRL W+++ T+ TR P+N
Sbjct: 191 -------------------------------KQQFKSTWGRLNWNKVSPTIDTRFDTPNN 219
Query: 747 RILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
HP R +T RE AR+Q F D Y +G
Sbjct: 220 GTNSHPELHRSITPREAARIQSFRDNYIFYG 250
>gi|225862882|ref|YP_002748260.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
gi|225789623|gb|ACO29840.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
Length = 360
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 138/341 (40%), Gaps = 79/341 (23%)
Query: 439 ILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMEN 498
+ L GD+D I GGPPCQG S NR+ Q +ED +N+ ++ +E LKPK VL+EN
Sbjct: 65 MFDLLGDIDVIVGGPPCQGFSSANRW---QKEIEDPRNKLFYEYIRFVEVLKPKVVLIEN 121
Query: 499 VVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQY 558
V IL G+ L Y ++ A YG+PQ RLR F R + +PQ
Sbjct: 122 VRGILTRDNGYAKNKIYEILQRSGYNVDSAVLDASEYGVPQKRLRAFFLATR--QDIPQI 179
Query: 559 PLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYG 618
F++++ QP VL+ +AI +L ++ + E Y
Sbjct: 180 ---------------TFEKLV-----KQP-----KVLVKEAIEELYVLEKKAQKGETTYL 214
Query: 619 TVAR--TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGA 676
++ + +Q Y+R + ++N H + +R+ +P+ G
Sbjct: 215 LQSKPASPYQNYLRNTENKIMN---------------HEIKYPADIQQQRISHVPQ--GG 257
Query: 677 NFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVN 736
N+RD+P L K R + +R+ +E V+
Sbjct: 258 NWRDIPEELFPNQRKNRHSSAYKRLN-----------------------------EEDVS 288
Query: 737 TVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ H+ H R+ T+RE ARLQ F D + G
Sbjct: 289 VTIDTGNAHSN-YFHTIFHRIPTVREAARLQSFKDSFVFSG 328
>gi|386752038|ref|YP_006225257.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi169]
gi|384558296|gb|AFH98763.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi169]
Length = 353
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 139/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ +L ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKEKLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q +R P LY+H+ + E++ I K +G LP
Sbjct: 219 YQALMR--------------KDSPK-LYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W+++ T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKVSPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|402224965|gb|EJU05027.1| S-adenosyl-L-methionine-dependent methyltransferase [Dacryopinax
sp. DJM-731 SS1]
Length = 470
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 84/174 (48%), Gaps = 21/174 (12%)
Query: 427 LKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVI 486
L + +K R LP PG+VD I GGPPCQG F+R NP A+ D +N + + +
Sbjct: 305 LFQLNSKTERCPDLPRPGEVDIIIGGPPCQG---FSRL-NPFASALDSRNSLIGNALSYV 360
Query: 487 EYLKPKYVLMENVVDILKFSGGF-------------LARYAVGRLVSMDYQTRLGIMAAG 533
++L P++VL+ENV +LK S A+ V LV YQ R ++ AG
Sbjct: 361 DFLHPRFVLLENVPPLLKMSSTVRDETGDEEHIENAFAKLIVSFLVQRGYQVRFKVLQAG 420
Query: 534 SYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQP 587
+G PQ R R W A + LP +P P + RG+ E+ A +P
Sbjct: 421 QHGAPQGRSRAIFWAAWHGEVLPDFPFP----LIRGIRKQAIAEMRTAVHRIRP 470
>gi|188526860|ref|YP_001909547.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi470]
gi|188143100|gb|ACD47517.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
Shi470]
Length = 355
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 139/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ +L ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKEKLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q +R P LY+H+ + E++ I K +G LP
Sbjct: 219 YQALMR--------------KDSPK-LYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W+++ T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKVSPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|385229364|ref|YP_005789280.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Puno135]
gi|344335802|gb|AEN17763.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Puno135]
Length = 355
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ +L ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKEKLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 219 YQ---------------ALMRKDSPKLYNHQATNHSEAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W+++ T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKVSPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|453054457|gb|EMF01909.1| DNA-cytosine methyltransferase [Streptomyces mobaraensis NBRC 13819
= DSM 40847]
Length = 655
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 146/354 (41%), Gaps = 93/354 (26%)
Query: 441 PLPGDVDFICGGPPCQGVSGFNRF----------RNPQAALEDIKNRQLLVFMDVIEYLK 490
P G++D + GGPPCQ S R R+P D++ ++DVI+ ++
Sbjct: 107 PAKGEIDLVAGGPPCQPFSRAGRSKIRHLVEHHGRDPH----DLRKELWSAYLDVIKRIR 162
Query: 491 PKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR 550
P+ VLMENV D+ F+ R +L + Y T++ ++ A YG+PQ R R+ L
Sbjct: 163 PRAVLMENVPDMGLGDDFFVVRVIEQQLEELGYATQVRLVDAWRYGVPQHRKRLIL---- 218
Query: 551 PFKKLPQYPLPTHEIVARGVIPN-EFQEIIVAYANNQPCQLEKGVLLSDAISDLP----L 605
+AR I E+Q+ + ++ L AI DLP +
Sbjct: 219 ---------------LARNDIERFEWQQEVAE---------DERTTLRHAIGDLPPLTVV 254
Query: 606 VTNNESEDERKYGTVAR--TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDD 663
T E E YGT + ++F + +R R ++ +++DH +V DD
Sbjct: 255 PTERVGEREMAYGTPSEDLSDFAREMRKR-------------AKREVVFDHMTRRVRPDD 301
Query: 664 YERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSST 723
+ V + D+ DP ++R + + T
Sbjct: 302 W--VIFDSMDSDTLYSDI-------------DPELQR----------------YSAEHFT 330
Query: 724 KPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ +L WD++ ++ +HP Q+R LT+RE AR+Q FPD ++ G
Sbjct: 331 DKYKKLDWDDLSRSITAHIAKDGYWYIHPDQNRTLTVREAARVQTFPDRFRFAG 384
>gi|316934943|ref|YP_004109925.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris DX-1]
gi|315602657|gb|ADU45192.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris DX-1]
Length = 495
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 148/368 (40%), Gaps = 56/368 (15%)
Query: 447 DFICGGPPCQGVSGFNRFR------NPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVV 500
D I GGPPCQ + R + +PQA D + L ++ +E L+P +LMENV
Sbjct: 103 DLIVGGPPCQAYARVGRAKLREVAEHPQAFKIDPRANLYLRYLHYVERLQPIALLMENVP 162
Query: 501 DILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWG------------ 548
DIL + G + + V L +M Y+ R ++ + +G+PQ R RVFL
Sbjct: 163 DILNYGGHNIGQEIVEALDAMGYEARYSLLNSAHHGVPQMRDRVFLLAFHKSIEADIRFP 222
Query: 549 -ARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVT 607
A F +LP T + + + N F+ + +L V +AI DLP +T
Sbjct: 223 KASRFCQLPSGYAGTRSVALKHI--NMFEGNAYVTPDTGSPELPPAVTAGEAIGDLPPIT 280
Query: 608 NNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERV 667
++ E + K G TE +Y +S +++ + + F+ + Y+ V
Sbjct: 281 LHK-EGKLKRGARRFTELSRY--------QEQASGELSEFAMEMRSWKGFESRDGVYDHV 331
Query: 668 CCIPKRKGANFRDL-PGVLVGPDNKVR---WDPSMERVMLKSGKP--------LVPDYAM 715
R A F + G ++V ++ R LK G +VP Y
Sbjct: 332 LRFLPRDTAIFEAMREGDEYPAAHRVAKKLFEEEAHRRKLKMGGAEWKRLQLAMVPPY-- 389
Query: 716 KFEHQSSTKPFGRLWWDEIVNTVVTRAQPH------NRILLHPSQDRVLTIRENARLQGF 769
F WW N H + I SQ RV+T+RE ARLQ F
Sbjct: 390 ------DPSKFPNRWWKLRRNAPSRTLMAHLGKDTYSHIHYDSSQGRVITVREAARLQSF 443
Query: 770 PDCYQLFG 777
PD + G
Sbjct: 444 PDGFVFAG 451
>gi|386750489|ref|YP_006223709.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi417]
gi|384556747|gb|AFH97215.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi417]
Length = 355
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 139/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ +L ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKEKLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q +R P LY+H+ + E++ I K +G LP
Sbjct: 219 YQALMR--------------KDSPK-LYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W+++ T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKVSPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|167042310|gb|ABZ07039.1| putative C-5 cytosine-specific DNA methylase [uncultured marine
crenarchaeote HF4000_ANIW97J3]
Length = 380
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 149/335 (44%), Gaps = 75/335 (22%)
Query: 446 VDFICGGPPCQGVSGFNRF-RNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
VD I GGPPC+G S N+ RN +++ NR ++ ++ +I LKPK +MENV I
Sbjct: 83 VDVIIGGPPCKGFSLTNKMTRN----MKNPMNRLVMDYVAMIRKLKPKAFVMENVPGIFA 138
Query: 505 FSGGFLARYAVGRLVSMD-YQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP-QYPLPT 562
GG + + + SM Y T ++ A YG+PQ R R F+ G+R ++P + P T
Sbjct: 139 MEGGKIVKDLISEFRSMGYYNTDSWLLNAADYGVPQIRKRAFIVGSR--SRIPIEKPRTT 196
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVAR 622
H +N Q + V + DAISDLP + + S Y
Sbjct: 197 HG------------------SNGQAPR----VSVFDAISDLPKIPDGSSSSRAAYKKPP- 233
Query: 623 TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLP 682
+FQ+ +R +P+ H + ++ +R+ +P G N++D+P
Sbjct: 234 NKFQRQLR------------NGQRKPT---QHVTTKNSDLVLKRIRKVP--SGGNWKDIP 276
Query: 683 GVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA 742
L+ +V D E++ ++M + T+P VT
Sbjct: 277 RELM----QVNGD--YEKIQ--------KAHSMIYRRLIKTEP------------SVTIT 310
Query: 743 QPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+++HP++ R+ ++RE AR+Q FPD Y+ G
Sbjct: 311 NFRKGMIIHPTEHRLFSVREAARIQTFPDSYKFEG 345
>gi|2952285|gb|AAC05488.1| chromomethylase [Gaultheria shallon]
Length = 62
Score = 93.2 bits (230), Expect = 5e-16, Method: Composition-based stats.
Identities = 41/62 (66%), Positives = 51/62 (82%)
Query: 459 SGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRL 518
SGFNRFRN L+D KN+QL+VFMD++E+LKP++VLMENVVDI K +GG L YA+ RL
Sbjct: 1 SGFNRFRNVTEPLKDPKNQQLIVFMDIVEFLKPRFVLMENVVDIFKLAGGVLGCYAIARL 60
Query: 519 VS 520
VS
Sbjct: 61 VS 62
>gi|311221492|gb|ADP76553.1| DNA methyltransferase [Helicobacter pylori]
Length = 587
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 137/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 219 YQ---------------ALMRKDSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE R+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREADRIQSFSDNYIFYG 324
>gi|2952281|gb|AAC05486.1| chromomethylase [Sedum obtusatum]
Length = 62
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 51/61 (83%)
Query: 459 SGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRL 518
SGFNRFRN + LED KN Q++V+MD++ YLKP++VLMENVVDILK S GFL RYA+ RL
Sbjct: 1 SGFNRFRNKENPLEDTKNEQIIVYMDIVNYLKPRFVLMENVVDILKLSQGFLGRYALARL 60
Query: 519 V 519
+
Sbjct: 61 I 61
>gi|420500502|ref|ZP_14999048.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
gi|393152269|gb|EJC52570.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
Length = 355
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 137/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L +++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVGAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ + A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQVSYQTLNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGTFESDYLNPVQSN 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q +R P LY+H+ + E++ I K +G LP
Sbjct: 219 YQALMR--------------KDSPK-LYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|341868919|gb|AEK98583.1| chromomethyltransferase 3a1 [Vitis amurensis]
Length = 70
Score = 92.8 bits (229), Expect = 6e-16, Method: Composition-based stats.
Identities = 40/70 (57%), Positives = 53/70 (75%)
Query: 458 VSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGR 517
+SG+NRFRN + L D +N Q+++FMD++++LKPKYVLMENVVD+LK L RYA+ R
Sbjct: 1 ISGYNRFRNVDSPLSDERNHQIVIFMDIVKFLKPKYVLMENVVDLLKLDKASLGRYAISR 60
Query: 518 LVSMDYQTRL 527
L M YQ RL
Sbjct: 61 LGHMKYQARL 70
>gi|217034606|ref|ZP_03440014.1| hypothetical protein HP9810_903g31 [Helicobacter pylori 98-10]
gi|216942961|gb|EEC22446.1| hypothetical protein HP9810_903g31 [Helicobacter pylori 98-10]
Length = 281
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 134/331 (40%), Gaps = 82/331 (24%)
Query: 448 FICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSG 507
I GG PCQG S N+ +N L+D +N L ++++++ LKPK ++ENV +++ +
Sbjct: 1 MIIGGSPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKALKPKIFIIENVKNLISCAK 56
Query: 508 GFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVA 567
G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 57 GYFLEEIKKRLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF------------- 103
Query: 568 RGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQK 627
+F + +P Q V + DAISDL + +NE E Y ++ +Q
Sbjct: 104 ------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQ- 146
Query: 628 YIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVG 687
A M LY+H+ + E++ I K +G LP L G
Sbjct: 147 --------------ALMRKDSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKNLHG 190
Query: 688 PDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QPHN 746
Q +GRL W+++ T+ TR P N
Sbjct: 191 -------------------------------KQQFKSTWGRLSWNKVSPTIDTRFDTPSN 219
Query: 747 RILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
HP R +T RE AR+Q F D Y +G
Sbjct: 220 GTNSHPELHRSITPREAARIQSFSDNYIFYG 250
>gi|357400512|ref|YP_004912437.1| DNA-methyltransferase Dcm [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|337766921|emb|CCB75632.1| putative DNA-methyltransferase Dcm [Streptomyces cattleya NRRL 8057
= DSM 46488]
Length = 566
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 143/353 (40%), Gaps = 91/353 (25%)
Query: 441 PLPGDVDFICGGPPCQGVSGFNRF----------RNPQAALEDIKNRQLLVFMDVIEYLK 490
P G +D + GGPPCQ S R R+P D++ ++DVI+ ++
Sbjct: 18 PAKGKIDLVAGGPPCQPFSRAGRSKIRHLVEHHGRDPH----DLRKELWSAYLDVIKRIR 73
Query: 491 PKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR 550
P+ VLMENV D+ F+ R +L + Y T++ ++ A YG+PQ R R+ L
Sbjct: 74 PRAVLMENVPDMGLGDDFFVVRVIEQQLEELGYATQVRLVDAWRYGVPQHRKRLILLARN 133
Query: 551 PFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLP----LV 606
++ E+Q+ + ++ L AI DLP +
Sbjct: 134 DIERF------------------EWQQEVAE---------DERTTLRHAIGDLPPLTVVP 166
Query: 607 TNNESEDERKYGTVAR--TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDY 664
T E E YGT + ++F + +R R ++ +++DH +V DD+
Sbjct: 167 TERVGEREMAYGTPSEDLSDFAREMRKR-------------AKREVVFDHMTRRVRPDDW 213
Query: 665 ERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTK 724
V + D+ DP ++R + + T
Sbjct: 214 --VIFDSMDSDTLYSDI-------------DPELQR----------------YSAEHFTD 242
Query: 725 PFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ +L WD++ ++ +HP Q+R LT+RE AR+Q FPD ++ G
Sbjct: 243 KYKKLDWDDLSRSITAHIAKDGYWYIHPDQNRTLTVREAARVQTFPDRFRFAG 295
>gi|420398114|ref|ZP_14897327.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
gi|393014788|gb|EJB15959.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
Length = 281
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 135/331 (40%), Gaps = 82/331 (24%)
Query: 448 FICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSG 507
I GGPPCQG S N+ +N L+D +N L ++++++ LKP+ ++ENV +++ +
Sbjct: 1 MIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISCAK 56
Query: 508 GFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVA 567
G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF------------- 103
Query: 568 RGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQK 627
+F + +P Q V + DAISDL + +NE E Y ++ +Q
Sbjct: 104 ------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQ- 146
Query: 628 YIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVG 687
A M LY+H+ + E++ I K +G LP L G
Sbjct: 147 --------------ALMRKDSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKNLHG 190
Query: 688 PDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QPHN 746
Q +GRL W+++ T+ TR P N
Sbjct: 191 -------------------------------KQQFKSTWGRLNWNKVSPTIDTRFDTPSN 219
Query: 747 RILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
HP R +T RE AR+Q F D Y +G
Sbjct: 220 GTNSHPELHRSITPREAARIQSFRDNYIFYG 250
>gi|346973695|gb|EGY17147.1| modification methylase AgeI [Verticillium dahliae VdLs.17]
Length = 1411
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 153/376 (40%), Gaps = 79/376 (21%)
Query: 425 EKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FM 483
+ L +G ++ +P G+VDF+ GG PC GF+R + KN+ L+ F
Sbjct: 842 DDLARLALEGRFASNVPAVGEVDFVSGGSPC---PGFSRLTVDKTTPNQRKNQSLVAAFA 898
Query: 484 DVIEYLKPKYVLMENVVDILKFSGGFLAR------YAVGRLVSMDYQTRLGIMAAGSYGL 537
I+ +PKY L+ENVV+I++ G R + +V M YQT ++ A ++G
Sbjct: 899 SFIDMYRPKYGLLENVVEIIQ---GRKTREEDVFCQLICAIVGMGYQTHFFLLDAWTFGS 955
Query: 538 PQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLS 597
PQ R R+FL A P +LP+ V +++P +
Sbjct: 956 PQSRSRIFLAFAAPGLRLPE----------------------VPMQSHRPLAMRS----- 988
Query: 598 DAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQ-MASRPSLLYDHRP 656
L L++N E + + A ++++ Q +A P +
Sbjct: 989 ---RSLGLLSNGEPMLRKTFTPTA--------------FASVTARQALADLPDIA----- 1026
Query: 657 FQVNNDDYERVCCIP---KRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPD- 712
D + CCIP R+ L +G W ++ K P+
Sbjct: 1027 ------DAKADCCIPFPDHRQSIGVTQLLRPQLGCIPTRPWGLNLGTAHNKGDGPMTAAE 1080
Query: 713 ---YAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQP---HNRILLHPSQDRVLTIRENARL 766
Y S+K FGRL D ++ T+ T+ P + R +LH +Q+R+LT+ E R
Sbjct: 1081 LSLYPQAQRQGPSSKAFGRLRPDRLMGTITTKPSPSDGYGRAVLHWAQNRILTVMEARRA 1140
Query: 767 QGFPDCYQLFGPVKER 782
QGF D + G E+
Sbjct: 1141 QGFRDHEVILGTPAEQ 1156
>gi|384892053|ref|YP_005766146.1| cytosine specific DNA methyltransferase [Helicobacter pylori Cuz20]
gi|308061350|gb|ADO03238.1| cytosine specific DNA methyltransferase [Helicobacter pylori Cuz20]
Length = 355
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 138/333 (41%), Gaps = 82/333 (24%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 73 INMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLISC 128
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
+ G+ +L ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 129 AKGYFLEEIKEKLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF----------- 177
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
+F + +P Q V + DAISDL + +NE E Y ++ +
Sbjct: 178 --------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSSY 219
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
Q +R P LY+H+ + E++ I K +G LP L
Sbjct: 220 QALMR--------------KDSPK-LYNHQATNHSQAALEKLKLINKEQGK--ECLPKNL 262
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QP 744
G Q +GRL W+++ T+ TR P
Sbjct: 263 HG-------------------------------KQQFKSTWGRLNWNKVSPTIDTRFDTP 291
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
N HP R +T RE AR+Q F D Y +G
Sbjct: 292 SNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|385224707|ref|YP_005784632.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 83]
gi|332672853|gb|AEE69670.1| possible DNA (cytosine-5-)-methyltransferase [Helicobacter pylori
83]
Length = 281
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 136/331 (41%), Gaps = 82/331 (24%)
Query: 448 FICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSG 507
I GGPPCQG S N+ +N L+D +N L ++++++ LKP+ ++ENV +++ +
Sbjct: 1 MIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISCAK 56
Query: 508 GFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVA 567
G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF------------- 103
Query: 568 RGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQK 627
+F + +P Q V + DAISDL + +NE E Y ++ +Q
Sbjct: 104 ------DFNLL-------EPSQ---SVNIQDAISDLAYLCSNEGAFESDYLNPIQSSYQV 147
Query: 628 YIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVG 687
+R P LY+H+ + E++ I K +G LP L G
Sbjct: 148 LMR--------------KDSPK-LYNHQATNHSQAALEKLKLINKEQGK--ECLPKNLHG 190
Query: 688 PDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QPHN 746
Q +GRL W+++ T+ TR P N
Sbjct: 191 -------------------------------KQQFKSTWGRLNWNKVSPTIDTRFDTPSN 219
Query: 747 RILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
HP R +T RE AR+Q F D Y +G
Sbjct: 220 GTNSHPELHRSITPREAARIQSFRDNYIFYG 250
>gi|123965679|ref|YP_001010760.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT
9515]
gi|123200045|gb|ABM71653.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT
9515]
Length = 689
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 142/345 (41%), Gaps = 61/345 (17%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRN-------PQAALEDIKNRQLLVFMDVIEYLKPKYVLM 496
G++ I GGPPCQ S ++R L + + F+ ++E +KPK LM
Sbjct: 119 GEISLIAGGPPCQPFSRNIKWRKHNEEVSAQHQELNEDRRELWESFISIVEQVKPKAFLM 178
Query: 497 ENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP 556
ENV DI + + R + R Y+ ++ A YG+PQ R R+F+ G + + P
Sbjct: 179 ENVSDIAQGGEQEIFRSIINRAEKAGYRIDPKLIYAWQYGVPQLRPRLFISGTKINECAP 238
Query: 557 -QYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTN--NESED 613
++P PT+ V +K V L DAISDLP + NE D
Sbjct: 239 MKWPKPTYNSV------------------------DKAVTLEDAISDLPPLEGGWNEKWD 274
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
ER T +Q +R + +++DH +V DD E + +
Sbjct: 275 ERYSYGGPITPYQTSMR-----------EWLEIDDDVIHDHLIRKVREDDLETFKLM-RS 322
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSST-KPFGRLWWD 732
G + L + + R+ S+ + GK + + F + + KP +
Sbjct: 323 TGVKYSQL------SEAQRRY--SVTSRAFREGKKVKENQKNSFGDKYNILKP------N 368
Query: 733 EIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
E T+ +HP Q+R L++RE AR+Q FPD + G
Sbjct: 369 EPCLTITAHMSKDGYWYIHPQQNRTLSVREAARVQSFPDGFNFHG 413
>gi|256397638|ref|YP_003119202.1| DNA-cytosine methyltransferase [Catenulispora acidiphila DSM 44928]
gi|256363864|gb|ACU77361.1| DNA-cytosine methyltransferase [Catenulispora acidiphila DSM 44928]
Length = 389
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 143/340 (42%), Gaps = 65/340 (19%)
Query: 445 DVDFICGGPPCQGVSGF--NRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDI 502
+VD I GGPPCQG S NR N +D +N F + Y +P+ + ENVV +
Sbjct: 74 EVDVIIGGPPCQGFSSIRPNRSTN----YDDPRNTLFEEFAAYVGYWRPRVFVFENVVGL 129
Query: 503 LKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
G + Y T I+ A +G+PQ R R+ L GA+ KL ++P PT
Sbjct: 130 ATHQRGVDLDAIQESFSQLGYTTDWRILNAAHFGVPQKRERLILLGAQQGVKL-RWPRPT 188
Query: 563 HEIVARGVIPNEFQEIIVAYA----NNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYG 618
H R + + ++ ++ +L + + DAI DLP + + E+ + +Y
Sbjct: 189 HHGNFRTIGHQDPARLLRPSQPDLFSDSSSELPAALTVRDAIDDLPPIGSGEAAE--RYD 246
Query: 619 TVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANF 678
ART++Q R RR DV L + A+R S +++ I K G N
Sbjct: 247 RPARTDYQ---RERRGDVAEL-TWHCATRHS---------------DKMMEIIKHSGPNI 287
Query: 679 RDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTV 738
+P + ++ SG + + RL DE T+
Sbjct: 288 SYIP-----------------KHLITSG---------------FSSCYSRLEADEAAPTI 315
Query: 739 -VTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
V P + +HP+ DR LT RE AR+Q F D ++ G
Sbjct: 316 TVNFVHPASNKCIHPNLDRALTPREGARIQSFDDNFRFAG 355
>gi|386356566|ref|YP_006054812.1| DNA-cytosine methyltransferase [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|365807074|gb|AEW95290.1| DNA-cytosine methyltransferase [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 611
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 143/353 (40%), Gaps = 91/353 (25%)
Query: 441 PLPGDVDFICGGPPCQGVSGFNRF----------RNPQAALEDIKNRQLLVFMDVIEYLK 490
P G +D + GGPPCQ S R R+P D++ ++DVI+ ++
Sbjct: 63 PAKGKIDLVAGGPPCQPFSRAGRSKIRHLVEHHGRDPH----DLRKELWSAYLDVIKRIR 118
Query: 491 PKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR 550
P+ VLMENV D+ F+ R +L + Y T++ ++ A YG+PQ R R+ L
Sbjct: 119 PRAVLMENVPDMGLGDDFFVVRVIEQQLEELGYATQVRLVDAWRYGVPQHRKRLILLARN 178
Query: 551 PFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLP----LV 606
++ E+Q+ + ++ L AI DLP +
Sbjct: 179 DIERF------------------EWQQEVAE---------DERTTLRHAIGDLPPLTVVP 211
Query: 607 TNNESEDERKYGTVAR--TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDY 664
T E E YGT + ++F + +R R ++ +++DH +V DD+
Sbjct: 212 TERVGEREMAYGTPSEDLSDFAREMRKR-------------AKREVVFDHMTRRVRPDDW 258
Query: 665 ERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTK 724
V + D+ DP ++R + + T
Sbjct: 259 --VIFDSMDSDTLYSDI-------------DPELQR----------------YSAEHFTD 287
Query: 725 PFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ +L WD++ ++ +HP Q+R LT+RE AR+Q FPD ++ G
Sbjct: 288 KYKKLDWDDLSRSITAHIAKDGYWYIHPDQNRTLTVREAARVQTFPDRFRFAG 340
>gi|421711053|ref|ZP_16150397.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
gi|407213258|gb|EKE83116.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
Length = 355
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 137/333 (41%), Gaps = 82/333 (24%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
++ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++
Sbjct: 73 INMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLISC 128
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 129 AKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF----------- 177
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
+F + +P Q V + +AISDL + +NE E Y ++ +
Sbjct: 178 --------DFNLL-------EPSQ---SVSVQEAISDLAYLCSNEGAFESDYLNPIQSNY 219
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
Q A M LY+H+ + E++ I K +G LP L
Sbjct: 220 Q---------------ALMRKDSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKNL 262
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QP 744
G Q +GRL W++I T+ TR P
Sbjct: 263 HG-------------------------------KQQFKGTWGRLNWNKISPTIDTRFDTP 291
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
N HP R +T RE AR+Q F D Y +G
Sbjct: 292 SNGTNSHPELHRSITPREAARIQSFSDDYIFYG 324
>gi|208434021|ref|YP_002265687.1| cytosine specific DNA methyltransferase [Helicobacter pylori G27]
gi|208431950|gb|ACI26821.1| cytosine specific DNA methyltransferase (putative type II)
[Helicobacter pylori G27]
Length = 281
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 135/331 (40%), Gaps = 82/331 (24%)
Query: 448 FICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSG 507
I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +++ +
Sbjct: 1 MIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLISCAK 56
Query: 508 GFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVA 567
G+ RL ++ YQ I+ YG+PQ R R F+ GA F
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNVKDYGVPQNRERAFIVGASRFSF------------- 103
Query: 568 RGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQK 627
+F+ + +P Q V + DAISDL + +NE E Y ++ +Q
Sbjct: 104 ------DFKLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSNYQ- 146
Query: 628 YIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVG 687
A M LY+H+ + E++ I K +G LP L G
Sbjct: 147 --------------ALMRKDSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKNLHG 190
Query: 688 PDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QPHN 746
Q +GRL W++I T+ TR P N
Sbjct: 191 -------------------------------KQQFKSTWGRLNWNKISPTIDTRFDTPSN 219
Query: 747 RILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
HP R +T RE AR+Q F D Y +G
Sbjct: 220 GTNSHPELHRFITPREAARIQSFSDNYIFYG 250
>gi|422870278|ref|ZP_16916771.1| modification methylase DdeI [Streptococcus sanguinis SK1087]
gi|328946815|gb|EGG40952.1| modification methylase DdeI [Streptococcus sanguinis SK1087]
Length = 387
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 143/350 (40%), Gaps = 89/350 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VD + GGPPCQ S + + + A + R++L F ++PK + ENV +L
Sbjct: 81 VDLVIGGPPCQSFSTVGKRQYDKRAKMYREYRRILSF------IQPKMFVFENVYGLLTM 134
Query: 506 SG------------GFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFK 553
F + G D T+L + A +G+PQ R RVFL G R
Sbjct: 135 KNEQNGPIIRNVKESFNDLSSFGEASGYDVYTKL--INAKDFGVPQNRERVFLIGIRKDL 192
Query: 554 KLP-QYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESE 612
K+ ++ P + L + L DAISDLP++ NNE +
Sbjct: 193 KIKFEWTFP------------------------EETTLNNEITLRDAISDLPILGNNEQK 228
Query: 613 DERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPK 672
+ Y RTE+Q +R + +++N V+ + ER+ I +
Sbjct: 229 N--NYICEPRTEYQALLRGNQTELLN-------------------HVSRNHGERLQKIMR 267
Query: 673 RKGANFRDLPGVLVGPDNKVRWDPSMER-VMLKSGKPLVPDYAMKFEHQSSTKPFGRLWW 731
G G N++ D +++ + L SG +GRLWW
Sbjct: 268 ALGE------GQGKNDINRMVEDGILDKDLYLTSG---------------YNNTYGRLWW 306
Query: 732 DEIVNTVVTR-AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVK 780
D+ T+ + P + +HP Q+R LT RE AR+Q FPD Y+ G ++
Sbjct: 307 DKPSTTITNNLSTPSSLRCIHPEQNRALTAREGARIQSFPDNYKFVGGLQ 356
>gi|322372404|ref|ZP_08046940.1| modification methylase DdeI [Streptococcus sp. C150]
gi|321277446|gb|EFX54515.1| modification methylase DdeI [Streptococcus sp. C150]
Length = 387
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 148/351 (42%), Gaps = 91/351 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VD + GGPPCQ S + + + A + R++L F ++PK + ENV +L
Sbjct: 81 VDLVIGGPPCQSFSTVGKRQYDKRAKMYREYRRILSF------IQPKMFVFENVYGLLTM 134
Query: 506 SG------------GFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFK 553
F + G + + T+L + A +G+PQ R RVFL G R K
Sbjct: 135 KNEQNGPIIRNVKESFNDLSSFGDVSGYNVYTKL--INAKDFGVPQNRERVFLIGVR--K 190
Query: 554 KLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
L +I + + P + L + L DAISDLP++ NN
Sbjct: 191 DL--------KIKSEWIFP-------------EAMTLNNEITLRDAISDLPILGNN---- 225
Query: 614 ERKYGTVA--RTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIP 671
E+KY + RTE+Q +R + +++N V+ + ER+ I
Sbjct: 226 EQKYNYICEPRTEYQALLRGNQTELLN-------------------HVSRNHGERLQKIM 266
Query: 672 KRKGANFRDLPGVLVGPDNKVRWDPSMER-VMLKSGKPLVPDYAMKFEHQSSTKPFGRLW 730
+ G G N++ D +++ + L SG +GRLW
Sbjct: 267 RALGE------GQGKNDINRMVEDGILDKDLYLTSG---------------YNNTYGRLW 305
Query: 731 WDEIVNTVVTR-AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVK 780
WD+ T+ + P + +HPSQ+R LT RE AR+Q FPD Y+ G ++
Sbjct: 306 WDKPSTTITNNLSTPSSLRCIHPSQNRALTAREGARIQSFPDNYKFVGGLQ 356
>gi|420399493|ref|ZP_14898698.1| cytosine-specific methyltransferase [Helicobacter pylori CPY3281]
gi|393019642|gb|EJB20783.1| cytosine-specific methyltransferase [Helicobacter pylori CPY3281]
Length = 281
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 135/331 (40%), Gaps = 82/331 (24%)
Query: 448 FICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSG 507
I GGPPCQG S N+ +N L+D +N L ++++++ LKP+ +++NV +++ +
Sbjct: 1 MIIGGPPCQGFS--NKGKN--LGLKDSRNFLFLEYIEIVKALKPEIFIIKNVKNLISCAK 56
Query: 508 GFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVA 567
G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF------------- 103
Query: 568 RGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQK 627
+F + +P Q V + DAISDL + +NE E Y ++ +Q
Sbjct: 104 ------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQ- 146
Query: 628 YIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVG 687
A M LY+H+ + E++ I K +G LP L G
Sbjct: 147 --------------ALMRKDSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKNLHG 190
Query: 688 PDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QPHN 746
Q +GRL W+++ T+ TR P N
Sbjct: 191 -------------------------------KQQFKSTWGRLSWNKVSPTIDTRFDTPSN 219
Query: 747 RILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
HP R +T RE AR+Q F D Y +G
Sbjct: 220 GTNSHPELHRSITPREAARIQSFRDNYIFYG 250
>gi|385227820|ref|YP_005787753.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Puno120]
gi|344334258|gb|AEN14702.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Puno120]
Length = 355
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 137/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ LK + ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDSRNFLFLEYIEIVKALKLEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRF------------ 175
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
F ++ + N V + DAISDL + +NE E Y ++
Sbjct: 176 ---------SFDFNLLESSQN--------VNVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q +R P LY+H+ + E++ I K +G LP
Sbjct: 219 YQALMR--------------KDSPK-LYNHQATNHSEAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W+++ T+ TR
Sbjct: 262 LHGK-------------------------------QQFKSTWGRLNWNKVSPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|237753192|ref|ZP_04583672.1| cytosine specific DNA methyltransferase [Helicobacter winghamensis
ATCC BAA-430]
gi|229375459|gb|EEO25550.1| cytosine specific DNA methyltransferase [Helicobacter winghamensis
ATCC BAA-430]
Length = 354
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 132/336 (39%), Gaps = 91/336 (27%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
V+ I GGPPCQG S + + L+D +N L ++D+++ L+P+ ++ENV I
Sbjct: 76 VNMIIGGPPCQGFS----LKGKKLGLQDPRNFLFLEYLDIVKQLQPELFIIENVKSIFST 131
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
+ G+ + + Y+ I+ A + +PQ R R F + K+ +P P+
Sbjct: 132 ANGYFKNEIERHIQDLGYKVDSAILNAKDFCVPQNRERAFFIAHK--KEYLGFPAPS--- 186
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
E V + DAISDL + +N+ E Y ++ +
Sbjct: 187 -------------------------EMQVCVKDAISDLAYLQSNQGEITSPYKNPPQSAY 221
Query: 626 QKYIR---LRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLP 682
QK +R L+ H N S Q+A + ++ IPK KG + LP
Sbjct: 222 QKMLRGEILQYHKASNHS--QIAIK------------------KLEMIPKEKGKEY--LP 259
Query: 683 GVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA 742
L G Q +GRL W+EI T+ TR
Sbjct: 260 KNLHG-------------------------------KQKFNTTWGRLKWNEISPTIDTRF 288
Query: 743 -QPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D + G
Sbjct: 289 DTPSNGTNSHPFLHRSITPREAARIQSFSDSFIFLG 324
>gi|384895439|ref|YP_005769428.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A]
gi|315586055|gb|ADU40436.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A]
Length = 281
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 135/331 (40%), Gaps = 82/331 (24%)
Query: 448 FICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSG 507
I GGPPCQG S N+ +N ++D +N L ++++++ LKP+ ++ENV +++ +
Sbjct: 1 MIIGGPPCQGFS--NKGKN--LGIKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISCAK 56
Query: 508 GFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVA 567
G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF------------- 103
Query: 568 RGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQK 627
+F + +P Q V + DAISDL + +N+ E Y ++ +Q
Sbjct: 104 ------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNDGAFESDYLNPIQSSYQ- 146
Query: 628 YIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVG 687
A M LY+H+ + E++ I K +G LP L G
Sbjct: 147 --------------ALMRKDSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKNLHG 190
Query: 688 PDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QPHN 746
Q +GRL W+++ T+ TR P N
Sbjct: 191 -------------------------------KQQFKSTWGRLNWNKVSPTIDTRFDTPSN 219
Query: 747 RILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
HP R +T RE AR+Q F D Y +G
Sbjct: 220 GTNSHPELHRSITPREAARIQSFSDNYIFYG 250
>gi|444301299|gb|AGD98765.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 354
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L ++++++ LKP+ +++NV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKALKPEIFIIKNVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQSRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNIQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q +R P LY+H+ + E++ I K +G LP
Sbjct: 219 YQALMR--------------KDSPK-LYNHQATNHSKAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W+++ T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLSWNKVSPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNNIFYG 324
>gi|420406179|ref|ZP_14905350.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6311]
gi|393024200|gb|EJB25311.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6311]
Length = 281
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 134/331 (40%), Gaps = 82/331 (24%)
Query: 448 FICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSG 507
I GGPPCQG S N+ +N L+D +N L +++++ LKP+ ++ENV +++ +
Sbjct: 1 MIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVRALKPEIFIIENVKNLISCAK 56
Query: 508 GFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVA 567
G+ +L ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 57 GYFLEEIKEKLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF------------- 103
Query: 568 RGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQK 627
+F + +P Q V + DAISDL + +NE E Y ++ +Q
Sbjct: 104 ------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQ- 146
Query: 628 YIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVG 687
A M LY+H+ + E++ I K +G LP L G
Sbjct: 147 --------------ALMRKDSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKNLHG 190
Query: 688 PDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QPHN 746
Q +GRL W+++ T+ TR P N
Sbjct: 191 -------------------------------KQQFKSTWGRLNWNKVSPTIDTRFDTPSN 219
Query: 747 RILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
HP R +T RE AR+Q F D Y +G
Sbjct: 220 GTNSHPELHRSITPREAARIQSFRDNYIFYG 250
>gi|408906497|emb|CCM12282.1| DNA-cytosine methyltransferase [Helicobacter heilmannii ASB1.4]
Length = 353
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 132/338 (39%), Gaps = 87/338 (25%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
G +D + GGPPCQ S + + D + ++ ++ + PK L ENVV +L
Sbjct: 67 GSIDVLLGGPPCQSYSTLGKRQ------MDTRAHLFQEYLKILAAVHPKIFLFENVVGLL 120
Query: 504 KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPT 562
GG L M YQ ++ A +G+PQ R RV L G ++K +P PT
Sbjct: 121 SMQGGKLFHSICACFAQMGYQIYSRVLNAMHFGVPQIRQRVILVGVDHSYQKPFVFPKPT 180
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVAR 622
HE EF + L A+ DLP + + ES D Y A
Sbjct: 181 HE--------KEF------------------INLRLALDDLPQIKSGESGDHLGYRHPAN 214
Query: 623 TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPK--RKGANFRD 680
F +++R D LS ++ + R+ I + + G + RD
Sbjct: 215 NPFLEFVR----DSPTLSE----------------HISPKNNPRLVQIMEALQDGQDKRD 254
Query: 681 LPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVT 740
LP P++ KSG YA + ++ W++ T+
Sbjct: 255 LP-------------PALRP---KSG------YA---------NTYAKMHWEQPAPTITR 283
Query: 741 R-AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
A P + +HP R L+IRE ARLQ FPD Y G
Sbjct: 284 NFATPSSSRCIHPRDSRALSIREGARLQSFPDSYIFCG 321
>gi|443313327|ref|ZP_21042939.1| DNA-methyltransferase Dcm [Synechocystis sp. PCC 7509]
gi|442776732|gb|ELR87013.1| DNA-methyltransferase Dcm [Synechocystis sp. PCC 7509]
Length = 413
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 140/334 (41%), Gaps = 55/334 (16%)
Query: 447 DFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK-- 504
D I GGPPCQG F+ + Q +D +N L F I L+PK +MENV +L
Sbjct: 75 DIIIGGPPCQG---FSIAGSAQKDPKDPRNSLFLNFAQWINCLRPKAFIMENVKGLLSRK 131
Query: 505 -FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
G + + Y + ++ + YG+PQ R RVF+ G K L PL TH
Sbjct: 132 NTEGEKVINIIKKTFEEIGYFVEIWLLNSAEYGVPQIRERVFIVGNTLGKTLGT-PLKTH 190
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVART 623
+ + +FQ ++ + L + L DAISDLP + E ++E+ Y ++ +
Sbjct: 191 SLNLSNM--KDFQ-----LSSLENTGLFPSLSLWDAISDLPSLNAREGKEEQSYISLPQN 243
Query: 624 EFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPG 683
+Q +IR + N + + + R + + ++ D +PK A R G
Sbjct: 244 IYQNWIRNSSQVLYNHVAMEHSQRVVERFKQIKWGESSSD------VPKNYSARRRSGNG 297
Query: 684 VLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQ 743
L + + +D + R+ P P + + ++
Sbjct: 298 EL----SMISYDQNNRRL-----HPYKPSHTIAASFYAN--------------------- 327
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+HP QDR LT RE AR+Q FPD Y+ G
Sbjct: 328 -----FVHPFQDRNLTAREGARIQSFPDKYRFLG 356
>gi|152994008|ref|YP_001359729.1| cytosine-specific methyltransferase [Sulfurovum sp. NBC37-1]
gi|151425869|dbj|BAF73372.1| cytosine-specific methyltransferase [Sulfurovum sp. NBC37-1]
Length = 362
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 140/334 (41%), Gaps = 76/334 (22%)
Query: 448 FICGGPPCQGVSGFN-RFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFS 506
+ GGPPCQG S N + RN L++ N + +E LKP + + ENVV F
Sbjct: 71 LLFGGPPCQGFSVANTKTRN----LDNPNNWMFREYCRFVEDLKPDWFVFENVVGFKSFD 126
Query: 507 GGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIV 566
G A L S+ Y+T ++ A +G+PQ+R R F+ G R
Sbjct: 127 KGRFAVEVEKELKSLGYKTNSSVLNAADFGVPQYRNRFFIIGHRK--------------- 171
Query: 567 ARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQ 626
+G I +F + + + V + +A+ DLP + N + E Y V +
Sbjct: 172 EKGGIKFDFDSL----------EKKPKVTVGEALKDLPSLKNGDKIKEAAYKRVKQV--H 219
Query: 627 KYIRL-RRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
Y++L RR L + SRP ++ + YE + ++G N
Sbjct: 220 PYVKLIRRTSKKALQNHVTHSRPHIV----------ERYEAI-----KQGEN-------- 256
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPH 745
W+ + +R +L++ + K H K RL DE VT A
Sbjct: 257 --------WEAAKKRGLLETYS------STKHTHSGIYK---RLKEDE---PAVTIANYR 296
Query: 746 NRILLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
+L+HP + R L++RE ARLQ FPD + GP+
Sbjct: 297 KSMLIHPHEHRGLSLREAARLQSFPDDFIFKGPL 330
>gi|289167785|ref|YP_003446054.1| site-specific DNA methylase [Streptococcus mitis B6]
gi|288907352|emb|CBJ22189.1| site-specific DNA methylase [Streptococcus mitis B6]
Length = 351
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 139/352 (39%), Gaps = 103/352 (29%)
Query: 435 YRSNILPLPGD--VDFICGGPPCQG--VSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLK 490
Y +I P+ G+ +D I GGPPCQG +SG +F +P +N+ L ++ ++ ++
Sbjct: 60 YEEDIKPIIGEQKIDIIVGGPPCQGMSLSGPRKFDDP-------RNKLYLSYIRLVREIQ 112
Query: 491 PKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR 550
P ++ENV+ I+ G + + M Y+ + ++ A YG+PQ R RV G R
Sbjct: 113 PTAFVIENVIGIVSLFKGQIKDTIIEEFSKMGYKVQFKVLLASDYGVPQNRKRVIFVGTR 172
Query: 551 PFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNE 610
+EF+ P L + AISDLP + N
Sbjct: 173 ---------------------NDEFE---------YPEALGTIITTEMAISDLPTLENEL 202
Query: 611 SEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCI 670
E E Y + + ++QK +R R + V+N +A+ + + + +
Sbjct: 203 GEIEMSYVSEPQNDYQKLMRKRSNVVLNHVAAKHSEKV---------------ISTIALV 247
Query: 671 PKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLW 730
P G N+++LP E T+ F W
Sbjct: 248 P--DGGNYKNLP-----------------------------------EELRETRKFNVAW 270
Query: 731 -----WDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
W T+ T + H H +RV T+RE+ARLQ FPD + +G
Sbjct: 271 TRFASWKP-APTIDTGHRHH----FHYKYNRVPTVRESARLQSFPDDFIFYG 317
>gi|336392213|ref|ZP_08573612.1| cytosine specific DNA methyltransferase [Lactobacillus coryniformis
subsp. torquens KCTC 3535]
Length = 349
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 140/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
DV I GGPPCQG S + + +L D +N F DV++++KP+ ++ENV ++L
Sbjct: 67 DVGMIIGGPPCQGFSQ----KGKRLSLRDPRNYLFRYFFDVVKFVKPENFVIENVPNLLT 122
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ S+ Y+ ++ A YG+PQ R R + G+ K + ++P +E
Sbjct: 123 AANGYFKNEIYELFESLGYEVISDVLNAKDYGVPQARRRAIIIGSLR-KNVLKFPKKQNE 181
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+ + DAISDL + + E E ++Y + +++
Sbjct: 182 MTT----------------------------VWDAISDLAFLESGEGEQVQEYKFIPQSK 213
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q+ +R+H + LY+H + + ER+ +P+ G DLP
Sbjct: 214 YQEM--MRKHS-------------TNLYNHVATKHSALAIERMMLVPENGGR--EDLP-- 254
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
E + KS + +GR+ + T+ TR
Sbjct: 255 --------------EEHLTKS---------------IFSGTWGRMDKNSQSVTITTRFDT 285
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + HP +R +T+RE AR+Q FPD +G
Sbjct: 286 PSSGRFTHPYLNRAITVREAARIQSFPDNMIFYG 319
>gi|336243018|ref|XP_003343078.1| hypothetical protein SMAC_10456 [Sordaria macrospora k-hell]
Length = 249
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 125/292 (42%), Gaps = 65/292 (22%)
Query: 491 PKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR 550
P++++MENV I +GG + R + + YQ + ++ A YG+PQ R RV R
Sbjct: 2 PRWLVMENVTGITSIAGGAIVRQIYEEMNRLGYQVEMRVLRAEDYGVPQERRRVVFIANR 61
Query: 551 PFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNE 610
+ +P PTH +G+ P V + DAISDLP + N E
Sbjct: 62 VGAPI-LFPEPTH---GKGLQPF--------------------VTVWDAISDLPKLENGE 97
Query: 611 SEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCI 670
+G +T +Q +R L Y+H ++ + + ER+ I
Sbjct: 98 DRGLPSFGGRPKTAYQAMLR---------------GDCRLAYNHSATRLASINLERMRHI 142
Query: 671 PKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLW 730
P G ++RD+P L L +G L A + +H TK +GR
Sbjct: 143 PP--GGSWRDIPHDL-----------------LPAGMKL----AKRSDH---TKRYGRPR 176
Query: 731 WDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
++ T++T+ H +HP Q+R T+RE ARLQ FPD + G E+
Sbjct: 177 KTDLACTILTKCDVHWGAYIHPVQNRSFTVREAARLQSFPDFFDFKGSRTEQ 228
>gi|347726860|gb|AEP19808.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L +++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVRAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ R ++ YQ I+ A YG+PQ R R F+ G F +
Sbjct: 128 CARGYFLEEIKERFKALGYQLSYQILNAKDYGVPQKRERAFIVGDSRFSFV--------- 178
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
F ++ + + N + DAISDL + +NE E Y ++
Sbjct: 179 ----------FDQLDPSLSVN----------VQDAISDLAYLGSNEGAIESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
++ +R P LY+H+ + +E++ I K +G +P
Sbjct: 219 YEALLR--------------KDSPK-LYNHQAANHSEAAFEKLKLINKEQGKEC--MPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y L+G
Sbjct: 291 PSNGTNSHPDFHRSITPREAARIQSFSDKYILYG 324
>gi|417847800|ref|ZP_12493761.1| putative modification methylase HaeIII [Streptococcus mitis SK1073]
gi|339456198|gb|EGP68791.1| putative modification methylase HaeIII [Streptococcus mitis SK1073]
Length = 351
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 138/352 (39%), Gaps = 103/352 (29%)
Query: 435 YRSNILPLPGD--VDFICGGPPCQG--VSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLK 490
Y +I P+ G+ +D I GGPPCQG +SG +F +P +N+ L ++ ++ +K
Sbjct: 60 YEEDIKPIIGEQKIDIIVGGPPCQGMSLSGPRKFDDP-------RNKLYLSYIRLVREIK 112
Query: 491 PKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR 550
P ++ENV+ I+ G + + M Y+ + ++ A YG+PQ R RV G R
Sbjct: 113 PTAFVIENVIGIVSLFKGQIKDTIIEEFSKMGYKVQFKVLLASDYGVPQNRKRVIFVGTR 172
Query: 551 PFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNE 610
+YP I+ + AISDLP + N
Sbjct: 173 --NDGFEYPEALGTIITTEM----------------------------AISDLPTLENEL 202
Query: 611 SEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCI 670
E E Y + + ++QK +R R + V+N +A+ + + + +
Sbjct: 203 GEIEMSYVSEPQNDYQKLMRKRSNVVLNHVAAKHSEKV---------------ISTIALV 247
Query: 671 PKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLW 730
P G N+++LP E T+ F W
Sbjct: 248 P--DGGNYKNLP-----------------------------------EELRETRKFNVAW 270
Query: 731 -----WDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
W T+ T + H H +RV T+RE+ARLQ FPD + +G
Sbjct: 271 TRFASWKP-APTIDTGHRHH----FHYKYNRVPTVRESARLQSFPDDFIFYG 317
>gi|420406011|ref|ZP_14905184.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6271]
gi|393021830|gb|EJB22960.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6271]
Length = 281
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 134/331 (40%), Gaps = 82/331 (24%)
Query: 448 FICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSG 507
I GG PCQG S N+ +N L+D +N L ++++++ LKP+ ++ENV +++ +
Sbjct: 1 MIIGGSPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISCTK 56
Query: 508 GFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVA 567
G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF------------- 103
Query: 568 RGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQK 627
+F + +P Q V + DAISDL + +NE E Y ++ +Q
Sbjct: 104 ------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQ- 146
Query: 628 YIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVG 687
A M LY+H+ + E++ I K +G LP L G
Sbjct: 147 --------------ALMRKDSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKNLHG 190
Query: 688 PDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QPHN 746
Q +GRL W+++ T+ TR P N
Sbjct: 191 -------------------------------KQQFKSTWGRLNWNKVSPTIDTRFDTPSN 219
Query: 747 RILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
HP R +T RE AR+Q F D Y +G
Sbjct: 220 GTNSHPELHRSITPREAARIQSFRDNYIFYG 250
>gi|345867871|ref|ZP_08819872.1| DNA-cytosine methyltransferase family protein [Bizionia
argentinensis JUB59]
gi|344047793|gb|EGV43416.1| DNA-cytosine methyltransferase family protein [Bizionia
argentinensis JUB59]
Length = 387
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 145/357 (40%), Gaps = 74/357 (20%)
Query: 423 CKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
+ L++ T +S I P D + GGPPCQG S N+ RN + D +N F
Sbjct: 48 IRNDLRDISTAEIKSIISRTP---DVVIGGPPCQGFSLANKNRNKVKS--DPRNELFYEF 102
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRL--VSMDYQTRLGIMAAGSYGLPQF 540
+ V+ L+PK +MENV +L G + + + YQ ++ A YG+PQ
Sbjct: 103 VRVVTDLQPKAFVMENVRGLLSMQKGEVIKLMKEEFENAGIGYQVDYKVLLASDYGVPQN 162
Query: 541 RLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAI 600
R RV + G R K L + PL PN+ E V + +AI
Sbjct: 163 RHRVIMIGIR--KDLEKQPL----------FPNK--------------TYENPVTVWEAI 196
Query: 601 SDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVN 660
SDLP + +E +++ Y T FQ++IR V N +A R + +R FQV
Sbjct: 197 SDLPQIKASEGDEKMMYETDPENNFQEFIRQENQKVYN----HIAMRHTQRLINR-FQVI 251
Query: 661 NDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQ 720
E + + + GA R P +KV + + +R L++ KP P A F+
Sbjct: 252 KAG-ESLAHVSQEYGAVKRGNP----KEKSKVVFSQNNQR--LRANKP-APTIAASFQSN 303
Query: 721 SSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+HP R T RE ARLQ FPD + G
Sbjct: 304 ----------------------------FIHPFLHRNFTAREGARLQSFPDNFIFQG 332
>gi|205360554|ref|ZP_02684441.2| modification methylase DdeI [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|417370248|ref|ZP_12141176.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|205348823|gb|EDZ35454.1| modification methylase DdeI [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|353582256|gb|EHC42962.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
Length = 394
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 91/204 (44%), Gaps = 26/204 (12%)
Query: 447 DFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFS 506
D I GGPPCQG S N+ +D +N F+ + L P ++MENV +I+K
Sbjct: 73 DIILGGPPCQGFSIANK---KNGDHKDPRNSLFEEFLRIGRILSPMVMIMENVPNIIKAK 129
Query: 507 ---GGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
G F+ L S+ Y I+ + +G+PQ R R+F+ +R K P +P PTH
Sbjct: 130 TKDGIFVVDIIKEELSSLGYHVYHNILESTDFGVPQIRKRLFIIASRKELKNP-FPKPTH 188
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVART 623
I L+K L DAISDLP + E +E Y A T
Sbjct: 189 NITGSD-------------------GLKKTPTLWDAISDLPQINAREGSEEMDYDKQALT 229
Query: 624 EFQKYIRLRRHDVVNLSSAQMASR 647
++QK +R H + N + + R
Sbjct: 230 DYQKQLRENSHKISNHKAMNHSKR 253
>gi|170084587|ref|XP_001873517.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651069|gb|EDR15309.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1273
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 149/393 (37%), Gaps = 73/393 (18%)
Query: 441 PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVV 500
P PG++ G PCQ S NRF++ + DIK+ +L + I++ +P ENV
Sbjct: 833 PKPGEIKVFTIGFPCQTHSTLNRFQD----VRDIKSNLILNALSWIDFYRPMLCYFENVA 888
Query: 501 DILKFSGGFLARYAVGRL------------VSMDYQTRLGIMAAGSYGLPQFRLRVFLWG 548
L+F V + + M YQ R G++ A YG PQ R R FL
Sbjct: 889 GFLQFRVFHTENSDVEGIEMGGLKLLKRGLLDMGYQVREGLLQAAHYGTPQRRERFFLIA 948
Query: 549 ARPFKKLPQYPLPTHEIVARGVIPNEF---------------QEIIVAYANN---QPCQL 590
A LP P PTH+ P EF + + Y N QP +
Sbjct: 949 ALDGTPLPALPQPTHD------FPKEFFKNTNSDVTYKTTPSTSLSIVYPNKKRIQPIRS 1002
Query: 591 EKG------VLLSDAISDLPLVTNNESEDERK-------------YGTVARTEFQKYIRL 631
G V + DAI DLP +++R +AR ++ +
Sbjct: 1003 ANGTALHPCVTIGDAIDDLPRFDWTHRDEQRSRRGREGVPGFPCDTEALARRGVKQCGYV 1062
Query: 632 RR----HDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRD---LPGV 684
R H + Q +P H + D +R I A+++
Sbjct: 1063 GRPPYHHPPKTVYQRQARMKPVRNLQHFTRILKADTVKRCINIRLEPNADYKSTLLFAFT 1122
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQP 744
+V D W ++ R L P AM + +GRL + + T VT A P
Sbjct: 1123 MVITDE---WRKAL-RADLLEWNTANPSSAM-VRKGFKSGAYGRLDMNAVFPTTVTNAGP 1177
Query: 745 HNRI--LLHPSQDRVLTIRENARLQGFPDCYQL 775
+ LHP R+LTIRE AR QGFPD ++
Sbjct: 1178 TAKQSRCLHPDSHRMLTIREFARSQGFPDSFEF 1210
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 262 MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADD 321
+ LDL+ G GA S GL G+ L A++I P A K+L+ N P T V N+ A+
Sbjct: 747 LPTLDLFGGVGAFSKGLAEGSEC----LRVTHAVEIGPSAAKTLERNSPGTIVYNQCAN- 801
Query: 322 FLSLLKEWAKLCQ 334
++L+ K C+
Sbjct: 802 --TMLRYAIKSCE 812
>gi|420427151|ref|ZP_14926196.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-9]
gi|393042084|gb|EJB43095.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-9]
Length = 335
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 131/334 (39%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 54 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 107
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + DY I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 108 QKGQLFQQICNAFKERDYILEHAILNALDYGVPQIRERVILVGALKSFKQKFYFPKP--- 164
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 165 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 199
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G N DLP
Sbjct: 200 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQNKDDLP-- 239
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 240 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 270
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 271 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 304
>gi|159897859|ref|YP_001544106.1| DNA-cytosine methyltransferase [Herpetosiphon aurantiacus DSM 785]
gi|159890898|gb|ABX03978.1| DNA-cytosine methyltransferase [Herpetosiphon aurantiacus DSM 785]
Length = 415
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 143/357 (40%), Gaps = 95/357 (26%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALE--DIKNRQLLVFMDVIEYLKPKYVLMENV-- 499
GD+D + GGPPCQG S NR QA+ E D N + F+D ++ PK L+ENV
Sbjct: 91 GDLDILMGGPPCQGYSSSNR----QASKETRDELNNMVKSFLDRVQDFSPKMFLLENVQG 146
Query: 500 ------VDILKFSGGFLA-----------RYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
D ++ L+ Y V R + Y ++ A +G+PQ R
Sbjct: 147 VTWTASTDEMRIPSEQLSFIDNEEIADVKDYLVHRARELGYHIWYSVLDAADFGVPQHRK 206
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISD 602
R FL+G R L T PN E + P + ++ AI D
Sbjct: 207 RFFLFGIRT-------DLTTD--------PNIRLEKFI-----NPYRTSTLTTVAQAIED 246
Query: 603 LPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNND 662
LP++ N E Y VA YI + R + N ++L+DH F N+
Sbjct: 247 LPVINNGEHWKGNNYNPVA----NGYITMMRSFMNN----------NVLFDH--FTTNHQ 290
Query: 663 DY--ERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQ 720
+Y ER IP +G N++ + ++ N + ++ R + ++ P + + +
Sbjct: 291 EYVLERFRNIP--EGENWKSIKNIMNTYKNVNKTHSNIYRRLQRNA----PSHTISHYRK 344
Query: 721 SSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ T +HP Q+R L+ RE RLQ FPD Y+ G
Sbjct: 345 AMT--------------------------IHPVQNRGLSFREACRLQSFPDWYRFSG 375
>gi|159470409|ref|XP_001693352.1| predicted protein [Chlamydomonas reinhardtii]
gi|158277610|gb|EDP03378.1| predicted protein [Chlamydomonas reinhardtii]
Length = 2505
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 21/219 (9%)
Query: 435 YRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYV 494
Y +LPL G V + G PPCQ V+G NR +N +NR + ++++++L+ YV
Sbjct: 1753 YTERLLPLRGTVTLLVGCPPCQDVTGHNRSQNGMPVWASPRNRVIGHILELVKFLEIPYV 1812
Query: 495 LMENVVDILKFSGGFLARYAVGRL-VSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFK 553
+E V D ++ G+ RY + M YQ R I+ A G+PQ R R+ +W A P
Sbjct: 1813 FIEQVRDAVRKDDGYWRRYVRAKAQADMRYQIRDAILHAPLQGIPQIRARLIMWMAAPGY 1872
Query: 554 KLPQYP----------LPTHEIVARGVI-----PNEFQEIIVAYANNQPCQLEKGVL--- 595
+LP +P LP + + P + + ++ P E +L
Sbjct: 1873 QLPPFPRPDFSSIFTVLPDPDTAGTSTVTELPKPYNLRRLCTVMRHSTPTAGEGTMLHPP 1932
Query: 596 --LSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLR 632
+ DA++ LP +N + K G A +++ ++
Sbjct: 1933 QVIKDAVTSLPARSNYDLSPAVKLGDSAPATALEHVLMQ 1971
>gi|23428398|gb|AAL15430.1| DNA methyltransferase A [Moraxella nonliquefaciens]
Length = 351
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 147/363 (40%), Gaps = 90/363 (24%)
Query: 420 LSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQL 479
L+ C+ LK+ + K ++N +V + GGPPCQG S + + + D +N
Sbjct: 52 LTSCE--LKDEIVKIAKTN------NVRAVLGGPPCQGFS----LKGKKLGMNDSRNFLF 99
Query: 480 LVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQ 539
+++++ + P +++MENV + + + + L SM Y ++ A YG+PQ
Sbjct: 100 QEYLEIVRQVNPDFIVMENVKALTNKTNEYFLTQILTGLKSMGYFVNYQVLNAKDYGVPQ 159
Query: 540 FRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDA 599
R R+F I+A P +F I QP V + A
Sbjct: 160 SRERIF-------------------IIATKNQPFDFDAIA-----KQP-----KVTVEQA 190
Query: 600 ISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQV 659
ISDL + + E + + Y ++ +Q+ QM SLLY+H+
Sbjct: 191 ISDLNFLESGEGDFLQTYPNKPQSHYQQ---------------QMRQNSSLLYNHQATNH 235
Query: 660 NNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEH 719
++ +++ IP + LP L G + ++D +
Sbjct: 236 SSVALQKLAMIPPE--GDKTSLPAHLKG---RQKFDTT---------------------- 268
Query: 720 QSSTKPFGRLWWDEIVNTVVTRA-QPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGP 778
+GRL W + T+ TR P N HP+ R +T RE ARLQ FPD + +G
Sbjct: 269 ------WGRLKWQSVSPTIDTRFDTPSNGCNSHPTLHRAITPREAARLQSFPDDFVFYGK 322
Query: 779 VKE 781
E
Sbjct: 323 KTE 325
>gi|299756527|ref|XP_001829400.2| hypothetical protein CC1G_00579 [Coprinopsis cinerea okayama7#130]
gi|298411717|gb|EAU92360.2| hypothetical protein CC1G_00579 [Coprinopsis cinerea okayama7#130]
Length = 1235
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 148/392 (37%), Gaps = 121/392 (30%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP PG D I G PCQ S N ++ D+KN +L + I+Y+ + V +ENV
Sbjct: 842 LPPPGSFDVIVIGFPCQAHSALNMYKK----ASDVKNNLVLNAISYIQYMGARIVYLENV 897
Query: 500 VDIL------------KFSGGF---LARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRV 544
+ + K GG + + L+ M YQ R + AG YG PQ R R
Sbjct: 898 MGFMRTPLNARQASPYKVQGGIEMGALKVLIRALLDMGYQLRFAALQAGHYGTPQGRERF 957
Query: 545 FLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQ----PCQLEKG------V 594
L A P +LP+ P PTH P+ + + Y + P + G V
Sbjct: 958 ILVAALPGTQLPELPQPTH------AFPSTQLGLKLHYGGEEKLIKPIRTAPGTAPHHPV 1011
Query: 595 LLSDAISDLP-------------------------LVTNNES-----EDERKYGTVARTE 624
D+I DL + N ES +++ Y T RT
Sbjct: 1012 TTEDSIGDLAPFDWVAPGARARPRMDEKGRPVKVIVCDNRESKTCGVDEDEPYHTKPRTR 1071
Query: 625 FQKYIRLRRHDVVNLSSAQM---ASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDL 681
+Q +R R LS Q A +P ++ RV IP+R GA+
Sbjct: 1072 YQMEMRQVRESTRPLSDLQHFTKAFKPEVV-------------RRVTKIPRRDGAS---- 1114
Query: 682 PGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR 741
VG K G Y +K + S K F +T+VT
Sbjct: 1115 ----VG----------------KRG------YKVKTYARVSRKGF--------FHTIVTN 1140
Query: 742 AQPHNR--ILLHPSQDRVLTIRENARLQGFPD 771
P + ++H +R+L+IRE AR QGFPD
Sbjct: 1141 ISPTAKQSSVIHYIDNRILSIRELARAQGFPD 1172
>gi|419648632|ref|ZP_14179966.1| type II DNA modification methyltransferase [Campylobacter jejuni
subsp. jejuni LMG 9217]
gi|380626143|gb|EIB44638.1| type II DNA modification methyltransferase [Campylobacter jejuni
subsp. jejuni LMG 9217]
Length = 356
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 134/357 (37%), Gaps = 94/357 (26%)
Query: 432 TKGYRSNILPLP-------GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMD 484
TK Y NI L G +D + GGPPCQ S + + D + ++
Sbjct: 46 TKVYHKNISKLDEMEMLNFGKIDLLLGGPPCQSYSTLGKRK------MDERANLFQEYLR 99
Query: 485 VIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRV 544
V++ L+PK + ENV+ +L G L +Y + ++Y I+ A YG+PQ R R+
Sbjct: 100 VLKILQPKIFIFENVIGLLSMQKGELFKYICCQFKKINYVVDYSILNAAFYGVPQIRERL 159
Query: 545 FLWGARP--FKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISD 602
+ G R + +P TH +K V L +A+ D
Sbjct: 160 IIVGIRQDIYYGSFIFPQKTH---------------------------DKFVSLKEALDD 192
Query: 603 LPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNND 662
LP + + E+ + + Y F ++R + +L +H
Sbjct: 193 LPFIQSGENGNNKGYRFKPNNAFLSFVR----------------KSEILKEHS------- 229
Query: 663 DYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSS 722
P N + M+ + K +P ++ + +S
Sbjct: 230 ------------------------SPKNNINLIRIMQTLKDGESKNSLP---LELQPKSG 262
Query: 723 -TKPFGRLWWDEIVNTVVTR-AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ ++WWD T+ A P + +HP R L+IRE ARLQ FPD Y +G
Sbjct: 263 YCNTYAKMWWDRPAPTITRNFATPSSSRCIHPRDSRALSIREGARLQSFPDDYIFYG 319
>gi|289167263|ref|YP_003445530.1| type II DNA modification enzyme (methyltransferase
cytosine-specific) [Streptococcus mitis B6]
gi|288906828|emb|CBJ21662.1| type II DNA modification enzyme (methyltransferase
cytosine-specific) [Streptococcus mitis B6]
Length = 387
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 143/349 (40%), Gaps = 87/349 (24%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VD + GGPPCQ S + + + A + R++L F ++PK + ENV +L
Sbjct: 81 VDLVIGGPPCQSFSTVGKRQYDKRAKMYREYRRILSF------IQPKMFVFENVYGLLTM 134
Query: 506 SG------------GFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFK 553
F + G + + T L + A YG+PQ R RVFL G R
Sbjct: 135 KNEQNGPIIRNVKESFKDLSSFGNVHGYNVYTEL--LNAKDYGVPQNRERVFLIGVRNDL 192
Query: 554 KLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
+ EF+ ++ + C E L DAI DLP + NN+ D
Sbjct: 193 NI------------------EFE-----WSFPEKCTSENPFNLRDAIGDLPSLGNNDRAD 229
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
+ Y +T++Q +R + + N S R + + + +
Sbjct: 230 Q--YVEDPQTDYQILMRGNQDQLFNHVSRNHGQRLQKI---------------MAALKEG 272
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVM-LKSGKPLVPDYAMKFEHQSSTKPFGRLWWD 732
+G N D+ N++ D ++RV+ L SG + +GRLWWD
Sbjct: 273 QGKN--DI--------NRMVEDGLLDRVLYLTSG---------------YSNTYGRLWWD 307
Query: 733 EIVNTVVTR-AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVK 780
T+ + P + +HPSQ+R LT RE AR+Q FPD Y+ G ++
Sbjct: 308 RPSTTITNNLSTPSSLRCIHPSQNRALTAREGARIQSFPDNYKFVGGLQ 356
>gi|386750285|ref|YP_006223492.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
00-7128]
gi|154795669|gb|ABS86795.1| putative DNA methylase [Helicobacter cetorum]
gi|384556528|gb|AFI04862.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
00-7128]
Length = 381
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 142/345 (41%), Gaps = 81/345 (23%)
Query: 445 DVDFICGGPPCQGVS--GFNRFRNPQ-AALEDIKNRQLLVFMDVIEYLKPKYVLMENVVD 501
D+D I GG PCQG S G +N Q ++D +N + +VI+ +PK+ + ENVV
Sbjct: 75 DIDVIIGGSPCQGFSMAGARIRQNKQDCFIDDKRNYLFRKYFEVIQAFEPKFFVFENVVG 134
Query: 502 ILKFSGGFLARYAVGRLVSMDYQTRLG-------IMAAGSYGLPQFRLRVFLWGARPFKK 554
+ + G + + + L S + G + G+PQ R R+ + G++
Sbjct: 135 LASMNKGAILQ-EIESLFSNGNNFKQGKYYLYKKVFEVNKIGVPQNRKRLIILGSKT--- 190
Query: 555 LPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
P E++ + + + + + DAISDL TN D+
Sbjct: 191 ----PFNGEEMIKK--------------VRQKNSKFNQSNTIKDAISDLAFKTNKLYIDK 232
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
++Y + + +QK +R +++Y+H F ER+ I ++
Sbjct: 233 QQYLKKSASNYQKEMRFM---------------SNVIYNHTLFNHKKIALERMQHI--KQ 275
Query: 675 GANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEI 734
G N++DL E+ M+KS + +GRL +++
Sbjct: 276 GQNYKDLK----------------EKDMIKS---------------VHSGAYGRLEYNKQ 304
Query: 735 VNTVVTRA-QPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGP 778
T+ TR P +HP DR +TIRE ARLQ F D + +G
Sbjct: 305 AVTITTRFDTPSAGRFIHPLFDRTITIREAARLQSFRDDFIFYGS 349
>gi|426200066|gb|EKV49990.1| hypothetical protein AGABI2DRAFT_115056 [Agaricus bisporus var.
bisporus H97]
Length = 1378
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 157/404 (38%), Gaps = 99/404 (24%)
Query: 441 PLP--GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMEN 498
P+P G+VDFI GGPPCQ SG N R +DI++ + +E+ Y L+EN
Sbjct: 945 PMPNRGEVDFIFGGPPCQSFSGANHHRQ----ADDIRSTMPCNMLSFLEHYDADYFLLEN 1000
Query: 499 VVDILKF-----------SGGF---LARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRV 544
V + + SGG + + + LV++ Q + ++ AG YG PQ R RV
Sbjct: 1001 VRGLANYPLLSEQKGRILSGGVKSGMVKLIMQCLVALGRQVQWKVLQAGQYGAPQNRERV 1060
Query: 545 FLWGARPFKKLPQYP--------------LPTHEIV---ARGVIPNEFQEIIVAYANNQP 587
W A+ LP++P LPT + R ++P + YA P
Sbjct: 1061 IFWAAKRGLVLPKHPVPLYAWKRGAMSSLLPTGTKLPPPTRSLVPG----VCHQYAPLPP 1116
Query: 588 CQLEKGVLLSDAISDLPLVTNNESEDERKYG----TVARTEFQKYIRLRRHDVVNLSSAQ 643
+ + AI DLP YG T R R+ H +V + A
Sbjct: 1117 ------ITVKTAIGDLPAFD--------WYGFLYLTFLRVNAISTFRINPHIIVRPTKAD 1162
Query: 644 M---ASRPSLLYDHRPFQVNNDDYERVCCIPKRK-GANFRDLPGVLVGPDNK-------- 691
+ A R +L + V++ + P G ++ GP N+
Sbjct: 1163 LQFDAQRSQVLGIPQFHAVHSGSQNELDSYPGYPYGTEYK------TGPQNRFQMWMRNG 1216
Query: 692 ---------------VRWDPSMERVMLKSGK-----PLVPDYAMKFEHQSSTKPFGRLWW 731
+R + V L+ G PL + E ++ +GRL
Sbjct: 1217 MGDNKLQGHYTKRFSLRAVEATTTVPLEEGADHTSLPLALQPGHRVEPKTKKSFYGRLSN 1276
Query: 732 DEIVNTVVTRAQP--HNRILLHPSQDRVLTIRENARLQGFPDCY 773
D +T+ P N LHP Q R++T+RE AR QGFPD Y
Sbjct: 1277 DGHFACTMTQLTPATKNARPLHPDQRRMVTVRELARSQGFPDNY 1320
>gi|421713201|ref|ZP_16152532.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R32b]
gi|407216567|gb|EKE86404.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R32b]
Length = 351
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 133/339 (39%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + DY I+ A YG+PQ R RVFL GA + FK+ +P P
Sbjct: 121 QKGQLFQQICNAFKERDYILEHAILNALDYGVPQIRERVFLVGALKRFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ +G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYGSASAK 322
>gi|111220172|ref|YP_710966.1| DNA modification methylase [Frankia alni ACN14a]
gi|111147704|emb|CAJ59362.1| putative DNA Modification methylase (Cytosine-specific
methyltransferase) [Frankia alni ACN14a]
Length = 401
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 137/333 (41%), Gaps = 89/333 (26%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
D + GGPPCQG S + +A E ++N + FM + +P ++ENV + LK
Sbjct: 114 ADVVIGGPPCQGFSRLGK----KAKKERLENYLWMDFMRCVAASQPAVFVIENVPEFLK- 168
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
FL + + Y+ ++ A +YG+PQ R R + G+R + P+ P PTH+
Sbjct: 169 DPAFLGVSREAK--KLGYKLVFAVLNAANYGVPQRRQRTIVIGSRIGE--PELPAPTHQ- 223
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
E QE +++ P + + DAISDLPL N
Sbjct: 224 --------EPQEQAAFFSDLPPWR-----TVRDAISDLPLEPTN---------------- 254
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
NL +++ S SL ER IP G N ++LP +
Sbjct: 255 -----------TNLHNSRNVSALSL--------------ERYRHIP--PGGNRKNLP-LH 286
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQP 744
+ PD DP + G ST GRL WD T+ T+ +P
Sbjct: 287 LQPDCWKYKDP-------RGG--------------GSTDLMGRLEWDAPSLTIRTQFLKP 325
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
LHP DR +T+RE ARLQ FPD +Q G
Sbjct: 326 EKGRYLHPEADRSITVREGARLQTFPDDFQFVG 358
>gi|194335797|ref|YP_002017591.1| DNA-cytosine methyltransferase [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308274|gb|ACF42974.1| DNA-cytosine methyltransferase [Pelodictyon phaeoclathratiforme
BU-1]
Length = 434
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 132/343 (38%), Gaps = 75/343 (21%)
Query: 437 SNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLM 496
+ I+P D + GGPPCQG S N+ + D + + + FMDV+ +M
Sbjct: 96 TTIIP---KADVVIGGPPCQGFSLLNKNKE-----GDARKQLWIPFMDVVRLSGADVFVM 147
Query: 497 ENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP 556
ENV ++L R +M ++ + A YG+PQ R R F+ G +
Sbjct: 148 ENVPELLS---SLECREIYAMANAMGFKLVSAKLCAADYGVPQIRWRAFIVGCKFADPQA 204
Query: 557 QYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERK 616
+P +G + I A+ QP + K DAI DLP
Sbjct: 205 VFPPKKTHFPHKGYRQRFVESSIPYIADAQPFRTVK-----DAIGDLPA----------P 249
Query: 617 YGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGA 676
GT+ R E ++L + + SL ER IP+
Sbjct: 250 QGTIVRPEAPP---------LDLHFGRTPTAKSL--------------ERYRSIPEE--- 283
Query: 677 NFRDLPGVLVGPDNKVRWDPSMERVMLKSGKP-LVPDYAMKFEHQSSTKPFGRLWWDEIV 735
M RV LK P L PD M+ + T FGRLWW++
Sbjct: 284 --------------------GMNRVDLKRIAPELTPDCWMR-KKSGGTDLFGRLWWNKPS 322
Query: 736 NTVVTR-AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
T+ T +P LHP QDR +T RE AR Q FPD ++ G
Sbjct: 323 VTIRTEFYKPEKGRYLHPVQDRPITHREAARFQSFPDEFKFTG 365
>gi|449085227|gb|AGE84600.1| cytosine DNA methyltransferase [Helicobacter pylori]
Length = 352
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 137/334 (41%), Gaps = 83/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I G PPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +I+
Sbjct: 71 EINMIIGRPPCQGFS--NKGKN--LGLKDPRNF-FLEYIEIVKAIKPEIFIIENVKNIIS 125
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F GA F
Sbjct: 126 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFNVGASRFSF---------- 175
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 176 ---------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 216
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G + LP
Sbjct: 217 YQ---------------ALMRKNSPKLYNHQATNHSQAALEKLKLINKEQGKEW--LPKN 259
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++I T+ TR
Sbjct: 260 LHG-------------------------------KQQFKSTWGRLNWNKISPTIDTRFDT 288
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 289 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 322
>gi|420473869|ref|ZP_14972547.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-19]
gi|393090997|gb|EJB91630.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-19]
Length = 351
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 132/334 (39%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFIFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALKSFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + ++E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSSENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G N DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQNKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG T + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YTNTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|445113595|ref|ZP_21377620.1| DNA (cytosine-5-)-methyltransferase [Prevotella nigrescens F0103]
gi|444841017|gb|ELX68037.1| DNA (cytosine-5-)-methyltransferase [Prevotella nigrescens F0103]
Length = 349
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 130/333 (39%), Gaps = 82/333 (24%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQG S + + ++ D +N F+ +E KPKY ++ENV +I+
Sbjct: 67 IDVVMGGPPCQGFSQ----KGKRLSINDPRNFLFKQFVRFVEEFKPKYFVLENVPNIITT 122
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
+ GF G ++ Y+ G++ A +G+PQ R R G L E+
Sbjct: 123 ANGFFRNEINGAFNALGYEVCSGVLHAVDFGVPQDRRRAVFIGQ----------LSKLEV 172
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
+ P + K + DAI DLP + + + E+E Y T+
Sbjct: 173 -------------------DLPKPIGKKNTVRDAIYDLPFIESGQGEEESTYDKQPTTDL 213
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
QK +R + +L++H
Sbjct: 214 QKDLR---------------GKCKVLHNH------------------------------- 227
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QP 744
V ++ ME V + G ++P S T + RL +E+ T+ TR P
Sbjct: 228 VATNHSPVALRRMEMVPIGEGGKVLPQEERTKSIYSGT--WCRLLENEVAATITTRYDTP 285
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ HP +R +T RE AR+Q FPD + +G
Sbjct: 286 SSGRFTHPLLNRCITTREAARIQTFPDSFIFYG 318
>gi|148988375|ref|ZP_01819822.1| cytosine specific DNA methyltransferase [Streptococcus pneumoniae
SP6-BS73]
gi|418166559|ref|ZP_12803215.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA17971]
gi|421211039|ref|ZP_15668023.1| modification methylase DdeI [Streptococcus pneumoniae 2070035]
gi|421231707|ref|ZP_15688352.1| modification methylase DdeI [Streptococcus pneumoniae 2080076]
gi|147926056|gb|EDK77130.1| cytosine specific DNA methyltransferase [Streptococcus pneumoniae
SP6-BS73]
gi|353830155|gb|EHE10285.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA17971]
gi|395573762|gb|EJG34349.1| modification methylase DdeI [Streptococcus pneumoniae 2070035]
gi|395596197|gb|EJG56419.1| modification methylase DdeI [Streptococcus pneumoniae 2080076]
Length = 351
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 138/352 (39%), Gaps = 103/352 (29%)
Query: 435 YRSNILPLPGD--VDFICGGPPCQG--VSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLK 490
Y +I P+ G+ +D I GGPPCQG +SG RF +P +N+ L ++ ++ ++
Sbjct: 60 YEEDIKPIIGEQKIDIIVGGPPCQGMSLSGPRRFDDP-------RNKLYLSYIRLVREIQ 112
Query: 491 PKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR 550
P ++ENV+ I+ G + + M Y+ + ++ A YG+PQ R RV G R
Sbjct: 113 PTAFVIENVIGIVSLFKGQIKDTIIEEFSKMGYKVQFKVLLASDYGVPQNRKRVIFVGTR 172
Query: 551 PFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNE 610
+YP I+ + AISDLP + N
Sbjct: 173 --NDGFEYPEALGTIITTEM----------------------------AISDLPTLENEL 202
Query: 611 SEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCI 670
E E Y + + ++QK +R R + V+N +A+ + + + +
Sbjct: 203 GEIEMSYVSEPQNDYQKLMRKRSNVVLNHVAAKHSEKV---------------ISTIALV 247
Query: 671 PKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLW 730
P G N+++LP L T+ F W
Sbjct: 248 P--DGGNYKNLPKEL-----------------------------------RETRKFNVAW 270
Query: 731 -----WDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
W T+ T + H H +RV T+RE+ARLQ FPD + +G
Sbjct: 271 TRFASWKP-APTIDTGHRHH----FHYKYNRVPTVRESARLQSFPDDFIFYG 317
>gi|313667095|gb|ADR72992.1| M2.BspMI [Bacillus sp. M(2010)]
Length = 353
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 135/343 (39%), Gaps = 90/343 (26%)
Query: 445 DVDFICGGPPCQGVSGFN--RFRNPQA--ALEDIKNRQLLVFMDVIEYLKPKYVLMENVV 500
DVD + GGPPCQG S F RF N Q ED +N+ + ++ V++ L+PKY MENV
Sbjct: 69 DVDLVVGGPPCQGYSMFGKRRFINTQGYDPQEDPRNKLVYEYIRVVKILRPKYFFMENVK 128
Query: 501 DILKFSGGFLARYAVGRLVSMDY-QTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
L G + + + Y + ++ A +G+PQ R R+F+ G R K + +P
Sbjct: 129 GFLSLDNGQFLKTVIQEFEELGYDNIKCEVVCAADFGVPQQRYRMFMIGNRVGKPV-NFP 187
Query: 560 LPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGT 619
P+H Y + L K + DAI DL L+
Sbjct: 188 SPSH------------------YPEDS-LFLPKYTTVGDAIMDLELLG------------ 216
Query: 620 VARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFR 679
E ++ L VV ER+ + + N
Sbjct: 217 ---PEVSNHVPLYHKSVVA--------------------------ERMSYVKEGDKLNVE 247
Query: 680 DLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVV 739
+LP L RV K+GK V +Y+ ++ +P W
Sbjct: 248 ELPEHLA----------IATRVDSKTGK--VRNYSHIYKRLHRNRP----AW-------- 283
Query: 740 TRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
T HN +HP+ +R LT+RE AR+Q FPD + G +E+
Sbjct: 284 TMVPGHNAFPIHPTLNRTLTVREAARIQSFPDHHVFTGTRQEQ 326
>gi|421720709|ref|ZP_16159989.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R046Wa]
gi|407219301|gb|EKE89118.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R046Wa]
Length = 355
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 135/334 (40%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I G PPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +I+
Sbjct: 72 EINMIIGEPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNIIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFGSDYLNPIQSN 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 219 YQ---------------ALMRKDSPKLYNHQATNHSQATLEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +G L W++I T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGHLNWNKISPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +G
Sbjct: 291 PSNGTNSHPELHRSITPREAARIQSFSDNYIFYG 324
>gi|420461842|ref|ZP_14960629.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-3]
gi|393080005|gb|EJB80734.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-3]
Length = 325
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 131/334 (39%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 40 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 93
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + DY I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 94 QKGQLFQRICNAFKERDYILEHAILNALDYGVPQIRERVILVGALKSFKQKFHFPKP--- 150
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 151 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 185
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 186 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 225
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 226 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 256
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 257 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 290
>gi|427387312|ref|ZP_18883368.1| DNA (cytosine-5-)-methyltransferase [Bacteroides oleiciplenus YIT
12058]
gi|425725473|gb|EKU88344.1| DNA (cytosine-5-)-methyltransferase [Bacteroides oleiciplenus YIT
12058]
Length = 356
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 134/337 (39%), Gaps = 81/337 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
++ + GGPPCQG S NR +E+ N F+ ++ L P++ L ENV ++
Sbjct: 71 NIFILFGGPPCQGFSVSNR---KTRTVENENNGLFKEFLRFVDDLNPEWFLFENVEGLVN 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
F G RY + + + Y+T I+ A YG+PQ R R F+ G R +P P +
Sbjct: 128 FDKGKTLRYILNQFKKIGYKTSEAILYASDYGVPQHRNRFFIVGNRNDIDF-DFPPPNDK 186
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I+ G +AI+DLP++ N D Y E
Sbjct: 187 IITVG----------------------------EAINDLPIIENGAHCDALPYRN--DIE 216
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDY--ERVCCIPKRKGANFRDLP 682
Y L R N S+ SR N DY ER I ++G N+R +P
Sbjct: 217 LSDYSLLMRRK-SNKSTQNYVSR-------------NADYIIERYKYI--KQGQNWRSIP 260
Query: 683 GVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA 742
+ L+ +Y K S + RL D+ V +
Sbjct: 261 ------------------------EFLMTNYKNKNNCHSGI--YKRLEEDK---PSVVIS 291
Query: 743 QPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
+L+HP QDR L++RE ARLQ FPD + G +
Sbjct: 292 NYRKNMLIHPWQDRGLSVREAARLQSFPDDFVFEGTI 328
>gi|420477123|ref|ZP_14975783.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-23]
gi|393093971|gb|EJB94584.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-23]
Length = 352
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 131/334 (39%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + DY I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERDYILEHAILNALDYGVPQIRERVILVGALKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|385248556|ref|YP_005776775.1| cytosine specific DNA methyltransferase [Helicobacter pylori F57]
gi|317181351|dbj|BAJ59135.1| cytosine specific DNA methyltransferase [Helicobacter pylori F57]
Length = 281
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 134/331 (40%), Gaps = 82/331 (24%)
Query: 448 FICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSG 507
I GGPPCQG S N+ +N L+D +N L +++++ LKP+ ++ENV +++ +
Sbjct: 1 MIIGGPPCQGFS--NKGKN--LGLKDSRNFLFLEHIEIVKALKPEIFIIENVKNLISCTK 56
Query: 508 GFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVA 567
G+ +L ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 57 GYFLEEIKEKLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF------------- 103
Query: 568 RGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQK 627
+F + +P Q V + D ISDL + +NE E Y ++ +Q
Sbjct: 104 ------DFNLL-------EPSQ---SVNIQDVISDLAYLCSNEGAFESDYLNPIQSSYQV 147
Query: 628 YIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVG 687
+R P LY+H+ + E++ I K +G LP L G
Sbjct: 148 LMR--------------KDSPK-LYNHQATNHSQAALEKLKLINKEQGK--ECLPKNLHG 190
Query: 688 PDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QPHN 746
Q +GRL W+++ T+ TR P N
Sbjct: 191 -------------------------------KQQFKSTWGRLNWNKVSPTIDTRFDTPSN 219
Query: 747 RILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
HP R +T RE AR+Q F D Y +G
Sbjct: 220 GTNSHPELHRSITPREAARIQSFRDNYIFYG 250
>gi|440682378|ref|YP_007157173.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
gi|428679497|gb|AFZ58263.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
Length = 412
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 138/347 (39%), Gaps = 82/347 (23%)
Query: 447 DFICGGPPCQGVSGFNRFRNP-QAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL-- 503
D I GGPPCQG S P + D +N + F I +L+PK +MENV +L
Sbjct: 75 DIIIGGPPCQGFS----IAGPAEKDPHDPRNTLFINFAKWISFLEPKAFVMENVKGLLSR 130
Query: 504 KFSGGFLARYAVGRLVS-MDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
K + G + + + Y + ++ + YG+PQ R RVF+ G + +KL P T
Sbjct: 131 KNAEGVKVIDIIKKTFEELGYFVEVWLLNSAEYGVPQIRERVFIVGNKLGQKL-GIPKKT 189
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVAR 622
H + + N +Q + + L + L DAISDLP + E ++E+ Y ++
Sbjct: 190 HSLNLLNI--NSYQ------LSFEEINLIPAINLWDAISDLPPLKAREGKEEQSYILESQ 241
Query: 623 TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERV-------CC--IPKR 673
+Q +IR +R +LY+H + + ER C +PK
Sbjct: 242 NHYQNWIR---------------NRGKILYNHVAMEHSQRLVERFKQIKWGECSSDVPKE 286
Query: 674 KGANFRDLPGVLVGP---DNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLW 730
GA R G L N R +PS K + + F
Sbjct: 287 YGAKRRSGNGELSNKTYDQNNRRLNPS------KPAHTIAASFYANF------------- 327
Query: 731 WDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+HP Q R LT RE AR+Q FPD Y+ G
Sbjct: 328 -------------------IHPFQHRNLTAREGARVQSFPDTYRFLG 355
>gi|347726864|gb|AEP19810.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 138/334 (41%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+V+ I GGPPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +I+
Sbjct: 72 EVNMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNIIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQSRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q +R P LY+H+ + E++ I + +G LP
Sbjct: 219 YQALMR--------------KDSPK-LYNHQATNHSQAALEKLKLINQEQGKEC--LPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL +++ T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNGNKVSPTIDTRLDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T R+ AR+Q + D Y +G
Sbjct: 291 PSNATNSHPELHRSITPRKAARIQSYSDNYIFYG 324
>gi|420398545|ref|ZP_14897758.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
gi|393015219|gb|EJB16390.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
Length = 352
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 132/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + DY I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERDYILEHAILNALDYGVPQIRERVILVGALKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
+ + KSG T + ++WW++ T+ +
Sbjct: 253 --------------KHLRPKSG---------------YTNTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGSASAK 322
>gi|413915570|emb|CCM44166.1| DNA-cytosine methyltransferase [Staphylococcus xylosus]
Length = 348
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 133/336 (39%), Gaps = 87/336 (25%)
Query: 444 GDVDFICGGPPCQGVS--GFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVD 501
G +D I GGPPCQG S G +P+ +L + ++ + +KPK+ ++ENV
Sbjct: 66 GSIDGIIGGPPCQGFSLVGTRDTNDPRNSL-------YIEYVRFVSVIKPKFFVLENVSG 118
Query: 502 ILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLP 561
+L G + R + Y ++ A YG+PQ R RVF G R
Sbjct: 119 LLSLEKGKFKDDIIKRFEGLGYNVDYKLLTASDYGVPQSRKRVFFVGLR----------- 167
Query: 562 THEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVA 621
+ V +E Y N +LE+ V S A+SDLP T+ S+ Y
Sbjct: 168 ------KDVFKDE-------YFNFDNLELEEMVSTSKALSDLPQATS--SKIGLDYINPP 212
Query: 622 RTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDL 681
++QKY+R +L+++H + + + + +P G +DL
Sbjct: 213 ENKYQKYMR---------------KNSNLIFNHEITKHTQNTVDIISLVP--DGGGIKDL 255
Query: 682 PGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR 741
P K+R +Y F+ +S P +
Sbjct: 256 PEEYY----KIR------------------NYNNAFKRMNSQAP-------------SST 280
Query: 742 AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+R H S++RV T+RE+AR+Q FPD Y G
Sbjct: 281 IDCGHRNYFHYSENRVPTVRESARIQSFPDWYIFKG 316
>gi|347726866|gb|AEP19811.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 134/334 (40%), Gaps = 82/334 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L +++++ +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVRAIKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ R ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERFKALGYQLSYQILNAKDYGVPQNRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 219 YQ---------------ALMRKDSPKLYNHQATNHSQAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q +GRL W++ T+ TR
Sbjct: 262 LHG-------------------------------KQQFKSTWGRLNWNKNRPTIDTRFDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D Y +
Sbjct: 291 PSNGTDSHPELHRSITPREAARIQSFSDNYIFYA 324
>gi|420455009|ref|ZP_14953839.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-14]
gi|393073359|gb|EJB74133.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-14]
Length = 348
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 131/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKHFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G N DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQNKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ +G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYGSASAK 322
>gi|406865911|gb|EKD18952.1| beta-Ala-His dipeptidase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 2005
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 123/305 (40%), Gaps = 56/305 (18%)
Query: 428 KEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIE 487
K F KG LP VDFI GGPPC G S N Q + KN + ++ ++
Sbjct: 1600 KLFDGKGNLIPDLPFRDQVDFIKGGPPCPGYS----VANCQKKDGEPKNSLVALYSAYVD 1655
Query: 488 YLKPKYVLMENVVDILKF------SGGF----------LARYAVGRLVSMDYQTRLGIMA 531
+ +PKY L+ENV ++ S F R SM YQ + ++
Sbjct: 1656 FYRPKYSLIENVTGLIHHTLRTPESNDFKTKPETLENGTIRMIYRTYTSMGYQVQCAVLY 1715
Query: 532 AGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIP-----NEFQEIIVAYANNQ 586
A +G PQ R RV +W +P +LP+YP P H R P ++ + + +
Sbjct: 1716 AEEHGSPQSRPRVIIWATQPGCRLPEYPQPEHLWKTRAACPIFMPGSKLNQSDFHWHRKR 1775
Query: 587 PCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKY-IRLRRHDV--------- 636
+ V L DA DLP E + + + + +T FQK+ RR+ +
Sbjct: 1776 RSTPHRVVTLGDAWIDLP-----EYDIKNPHLIIPQTRFQKFEAEQRRNKITFYDSLDGE 1830
Query: 637 --VNLSSAQMASRP--------------SLLYDHRPFQVNNDDYERVCCIPKRKGANFRD 680
V + AS P +++ H ++ + + ERVC IP AN
Sbjct: 1831 SYVGSDNQTYASGPKSEYQRIMRKGTTDNVITAHVTRKLTSINTERVCTIPLVTEANHES 1890
Query: 681 LPGVL 685
LP L
Sbjct: 1891 LPVAL 1895
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 106 YTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDTVIK 164
+ ++ G Y+ GD V +E + + ARI+ +FE D E RWF +T++
Sbjct: 1168 FASITLGGVSYHPGDCVIVASEAQSEEPRFARIISIFEDEDDEVSVHLRWFEVGSNTILG 1227
Query: 165 DLACLVDRKRVFLSDVEDDNPLNCIVSKAKIA 196
+ A + +FL D NP+NCIV+K K+
Sbjct: 1228 ETA---GPRELFLLTSCDSNPVNCIVAKVKVG 1256
>gi|145218883|ref|YP_001129592.1| DNA-cytosine methyltransferase [Chlorobium phaeovibrioides DSM 265]
gi|145205047|gb|ABP36090.1| DNA-cytosine methyltransferase [Chlorobium phaeovibrioides DSM 265]
Length = 377
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 141/369 (38%), Gaps = 96/369 (26%)
Query: 415 EPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGF---NRFRNPQAAL 471
E I + +E LK +T DV + GGPPCQG S NR
Sbjct: 54 EDIHDIDFARESLKTGIT------------DVTLVSGGPPCQGFSTVGSKNR-------- 93
Query: 472 EDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMA 531
D +N ++ + L P YV+ ENV K G L SM Y I+
Sbjct: 94 RDERNSLFYEYLRAVAELNPLYVIFENVSGFKKMYDGEAYLALTTELRSMGYDLASSILE 153
Query: 532 AGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEF-QEIIVAYANNQPCQL 590
A YGLPQ R R + G + K LP LP+ P F E + A
Sbjct: 154 ASDYGLPQRRQRTIIVGWK--KHLPAVSLPS---------PTHFSSEDLFGGA------- 195
Query: 591 EKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSL 650
K + + DAISDLP + N + +E Y + + ++Q+ +R ++ +S+ ++
Sbjct: 196 -KKLTVMDAISDLPPLEANSTSNE--YASSPKNDYQQRMRGEVEELTEHNSSNYGTKMQ- 251
Query: 651 LYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLV 710
E + IP +G DLP + + P N R
Sbjct: 252 --------------EILSLIP--EGGTVDDLP-LRLRPKNYFR----------------- 277
Query: 711 PDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR--AQPHNRILLHPSQDRVLTIRENARLQG 768
+ RL + + + VTR P + +HP Q+R L+ RE ARLQG
Sbjct: 278 -------------NTYARL-YPTLPSPTVTRNFGTPSSSRCVHPFQNRALSTREGARLQG 323
Query: 769 FPDCYQLFG 777
F D Y G
Sbjct: 324 FHDSYVFTG 332
>gi|2894386|emb|CAA74996.1| Bpu10I (5m)cytosine-specific DNA modification methyltransferase
(C1) [Bacillus pumilus]
Length = 398
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 149/339 (43%), Gaps = 73/339 (21%)
Query: 446 VDFICGGPPCQG--VSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
+D + GGPPCQG +S NR RNP +D +N F+ VI+ +KP+ V MENV +I+
Sbjct: 73 IDAVIGGPPCQGFSISASNR-RNP----DDPRNYLYRQFLRVIKLVKPRIVFMENVKEIV 127
Query: 504 KF---SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPL 560
KF +G L + L + Y + I+ A +G+PQ R+R F+
Sbjct: 128 KFVLPNGKLLLDEIIFCLEELGYSIKPFIINAADFGIPQERIRFFM-------------- 173
Query: 561 PTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLV--TNNESEDERKYG 618
+ + G +P+ QE + + + K + AISDLP V +E D +Y
Sbjct: 174 ----VASLGPVPDLLQEATYSETVDL-LRPNKYRDVYSAISDLPAVYPRQHEEGDTFEYD 228
Query: 619 TVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANF 678
+Q RL R N +Y+H P + + E+ I + +G +
Sbjct: 229 NQPVNNYQ---RLMRKGSAN------------IYNHIPMRHTDRTIEKFKMI-RTQGID- 271
Query: 679 RDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTV 738
LP L ++ R D S ++ K+ Y+ + TKP +
Sbjct: 272 -SLPENL---RSRTRGDSS--KISNKT-------YSQNHRRINPTKP----------SPT 308
Query: 739 VTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+T + +HP QDR LT+RE AR+Q FPD Y +G
Sbjct: 309 ITAS--FYSSFIHPYQDRNLTVREAARIQSFPDNYIFYG 345
>gi|429860368|gb|ELA35108.1| DNA methyltransferase dim-2 [Colletotrichum gloeosporioides Nara gc5]
Length = 1133
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 160/368 (43%), Gaps = 75/368 (20%)
Query: 433 KGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FMDVIEYLKP 491
+G S+ +P G VDF+ G PC GF+R +A E KN+ L+ F I+ +P
Sbjct: 721 EGKFSDKVPKIGTVDFVSAGSPC---PGFSRLTVDKATPEQRKNQSLVAAFASFIDTYRP 777
Query: 492 KYVLMENVVDIL-----KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFL 546
+Y L+ENV++I+ K F + LV + YQT ++ A SYG PQ R RVFL
Sbjct: 778 RYGLLENVLEIVQPRREKNEDVFCQ--LICALVGLGYQTHFFLLDAWSYGSPQSRSRVFL 835
Query: 547 WGARPFKKLPQYPLPTHE-------IVARGVIPNE--FQEIIVAYANNQPCQLEKGVLLS 597
A P KLP+ PL +H + G +PN+ E +V P + +
Sbjct: 836 CFAAPGHKLPEPPLQSHSHYKPDVRLKTLGKLPNDEPMGEHLV-----MPTPF-RFIGSE 889
Query: 598 DAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPF 657
+A +DLP + + +F I H + + + + ++ S++ H P+
Sbjct: 890 EATADLPNIIDG--------------KFDICIPFPDHRLAHGYTKYLRNQLSVIPTH-PY 934
Query: 658 QVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKF 717
G NF W+ +M K+ + P +
Sbjct: 935 -----------------GMNF------------TTTWNKG-HGIMTKAERDFFPAAGRRV 964
Query: 718 EHQSSTKPFGRLWWDEIVNTVVTRAQPHN-RI--LLHPSQDRVLTIRENARLQGFPDCYQ 774
Q+S++ + R + +++ TV T P + R+ +LH +Q R LT+ E R QGF D
Sbjct: 965 T-QASSRAWSRCFPQQVMQTVTTVPSPADARMGRILHWNQSRTLTVMEARRAQGFLDHEV 1023
Query: 775 LFGPVKER 782
+ G K++
Sbjct: 1024 ILGQPKDQ 1031
>gi|367031908|ref|XP_003665237.1| hypothetical protein MYCTH_2095291 [Myceliophthora thermophila ATCC
42464]
gi|347012508|gb|AEO59992.1| hypothetical protein MYCTH_2095291 [Myceliophthora thermophila ATCC
42464]
Length = 2146
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 101/202 (50%), Gaps = 16/202 (7%)
Query: 420 LSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQL 479
L + L+ + Y N+ P PG+V+FI G PC GF+ + L +KN+ L
Sbjct: 1590 LGSVDDLLRRALQGKYAENV-PRPGEVEFISAGSPC---PGFSLLTPDKTTLAQVKNQSL 1645
Query: 480 LV-FMDVIEYLKPKYVLMENVVDILKF----SGGFLARYAVGRLVSMDYQTRLGIMAAGS 534
+ F +++ +PKY ++ENVV I++ S L++ +V M YQ +L + A S
Sbjct: 1646 VASFASFVDFYRPKYGILENVVTIVQARHNRSQDVLSQLFCA-IVGMGYQAQLVLGDAWS 1704
Query: 535 YGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEII----VAYANNQPCQL 590
+G PQ R RVFL+ A P LP PL +H A GV E+ + QP
Sbjct: 1705 HGAPQGRSRVFLYFAAPGLHLPDAPLLSHSHYA-GVNSRGLGEMCNGEPFVSRSFQPTPF 1763
Query: 591 EKGVLLSDAISDLPLVTNNESE 612
K V ++ SDLPL+ + ++E
Sbjct: 1764 -KYVSAAEGTSDLPLIGDGKAE 1784
>gi|420437308|ref|ZP_14936292.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-28]
gi|393053622|gb|EJB54566.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-28]
Length = 348
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 132/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RVFL GA + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQTRERVFLVGALKRFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG T + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YTNTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGSASAK 322
>gi|2952283|gb|AAC05487.1| chromomethylase [Rhododendron macrophyllum]
Length = 62
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 48/62 (77%)
Query: 459 SGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRL 518
SGFNRFRN L D KN QL VFMD++E+LKP++VLMENVVDI K +GG L YAV RL
Sbjct: 1 SGFNRFRNVTEPLSDPKNHQLEVFMDIVEFLKPRFVLMENVVDIFKLAGGVLGCYAVARL 60
Query: 519 VS 520
VS
Sbjct: 61 VS 62
>gi|409052037|gb|EKM61513.1| hypothetical protein PHACADRAFT_204683 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1320
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 154/389 (39%), Gaps = 91/389 (23%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
GD+D I G P + D K+ +L + +++L+PK ENV L
Sbjct: 911 GDIDCIVAGFPWH-----VKLVMLLPKANDRKSHLILNLLSWVDFLEPKLCFFENVCGFL 965
Query: 504 KFS------------GGFLA---RYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWG 548
+++ GG ++ V LV+M YQ + ++ A YG PQ R+R FL
Sbjct: 966 QYNLNSIQASRYKLEGGIQMGGLKFLVRALVTMGYQVKFAVLQAAHYGTPQTRVRFFLIA 1025
Query: 549 ARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKG------VLLSDAISD 602
A+ + +P +P P + + + +F ++A +P E G V + DAI D
Sbjct: 1026 AQLGQPMPNFPAPLYSFTPKDALEIKFSHGLIA----RPINTENGIAPFRYVTVDDAIGD 1081
Query: 603 LP----LVTNNESEDER-----------------------------KYGTVARTEFQKYI 629
L + +E ER KY ART FQ+
Sbjct: 1082 LLRWDWVNPRKGAERERRDPGTREAIRAVKVEQTKKAVGPLAAGTVKYHGPARTRFQEKA 1141
Query: 630 RLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPD 689
R+++ ++ +L Q +R L D RV IP A++ L P
Sbjct: 1142 RVKQSEIKDL---QHITRVLKL----------DTVARVTLIPLEAKADYHALLKDKDIPR 1188
Query: 690 NKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR-- 747
+ + W + + + H +GR+ +E T VT +P +
Sbjct: 1189 DLLEWHWADPKSAIA-------------RHGFRPGLYGRMDPNEWFQTTVTNVEPTAKQC 1235
Query: 748 ILLHPSQDRVLTIRENARLQGFPDCYQLF 776
+L+P RV+++RE AR QGFPD +Q +
Sbjct: 1236 KVLNPFCKRVVSVRELARSQGFPDHFQFY 1264
>gi|17232307|ref|NP_488855.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120]
gi|17133952|dbj|BAB76514.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120]
Length = 414
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 140/335 (41%), Gaps = 57/335 (17%)
Query: 447 DFICGGPPCQGVSGFNRFRNP-QAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL-- 503
D I GGPPCQG S P Q +D +N + F I++L+PK +MENV +L
Sbjct: 76 DIIIGGPPCQGFS----IAGPAQKDPKDPRNGLFINFAQWIKFLEPKAFVMENVKGLLSR 131
Query: 504 KFSGGFLARYAVGRLVS-MDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
K + GF + + + Y + ++ A YG+PQ R R+F+ G + K L P T
Sbjct: 132 KNAEGFKVIDIIKKTFEELGYFVEVWVLNAAEYGIPQIRERIFIVGNKKGKVL-GIPKKT 190
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVAR 622
H + + N Q I + P + L DAISDLP + E +E+ Y +
Sbjct: 191 HSLQFLNL--NRSQLSIFDDMSIIPA-----LTLWDAISDLPELNAREGSEEQPYHLKPQ 243
Query: 623 TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLP 682
+Q + R + N + + + R + H + ++ D + K GA R
Sbjct: 244 NTYQTWARNGSATLYNHVAMEHSDRLVERFRHIKWGESSSD------VSKEHGARRRSGN 297
Query: 683 GVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA 742
G L NK +D + R+ P P + + ++
Sbjct: 298 GEL---SNK-SYDQNNRRL-----NPHKPSHTIAASFYAN-------------------- 328
Query: 743 QPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+HP Q R LT RE AR+Q FPD Y+ FG
Sbjct: 329 ------FVHPFQHRNLTAREGARIQSFPDNYRFFG 357
>gi|386750888|ref|YP_006224108.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi417]
gi|384557146|gb|AFH97614.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi417]
Length = 348
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 132/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + DY I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERDYILEHAILNALDYGVPQIRERVILVGALKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
+ + KSG T + ++WW++ T+ +
Sbjct: 253 --------------KNLRPKSG---------------YTNTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L++RE ARLQ FPD Y+ G +
Sbjct: 284 PSSSRCIHPRDSRALSVREGARLQSFPDNYKFCGSTSAK 322
>gi|334119885|ref|ZP_08493969.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
gi|333457526|gb|EGK86149.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
Length = 394
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 131/334 (39%), Gaps = 81/334 (24%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
++D I GG PCQG S + + D +N F D++ ++P YV++ENV +L
Sbjct: 78 AEIDIITGGAPCQGFSTVGK-----REITDPRNSLWRNFRDLVAEIRPAYVIIENVEGML 132
Query: 504 KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
GG + + + Y + ++ A YG+PQ R R F G
Sbjct: 133 VMQGGKVRDSVIASFADIGYHMKCRLLKAADYGVPQLRKRAFFIGW-------------- 178
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVART 623
G++P EF I Y V ++DAISDLP + N E + Y ++ +T
Sbjct: 179 ---LDGLLPPEFPVPISHYY----------VTVADAISDLPPL--NAGEICKSYQSMPQT 223
Query: 624 EFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPG 683
++Q + R N +L H + E + IP G N + +P
Sbjct: 224 DYQ----IARRKTAN-----------ILLHHEAANHSQKLIEILKYIP--DGGNRKSIP- 265
Query: 684 VLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQ 743
+R+ SG + + +S KP + +
Sbjct: 266 ---------------DRLQPASG------FHNSYARLASNKP--------AIAVTSNMRK 296
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + HPSQ R LT+RE RLQ F D +++ G
Sbjct: 297 PSSARATHPSQHRGLTVREGLRLQSFDDDFEVMG 330
>gi|428308044|ref|YP_007144869.1| DNA-cytosine methyltransferase [Crinalium epipsammum PCC 9333]
gi|428249579|gb|AFZ15359.1| DNA-cytosine methyltransferase [Crinalium epipsammum PCC 9333]
Length = 395
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 136/345 (39%), Gaps = 84/345 (24%)
Query: 442 LPGDVDFICGGPPCQGVS--GFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
L G+VD + G PPCQG S G+ ++P+ +L + F D IE L PK + ENV
Sbjct: 62 LDGNVDIVVGSPPCQGFSNEGYKNEKDPRNSL-------VWKFFDFIEILTPKVWIFENV 114
Query: 500 VDILKFSGGFLARYAVGRLVSM-DYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQY 558
G + RL M YQ I+ + YG+PQ R R F GA+ F+ PQ
Sbjct: 115 PGFKTSYKGIYFKQLQQRLELMPAYQWNYFILNSSDYGVPQKRSRFFAIGAKKFQ--PQR 172
Query: 559 PLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYG 618
P TH ++ E++ +K + L ++ISDLP + E + +Y
Sbjct: 173 PEATH---------SKLGEVL---------GTDKAISLWESISDLPKIGIGEKKGIFEYD 214
Query: 619 TVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANF 678
A E+QK+ RL + + N +S + R E++ +P G
Sbjct: 215 KPAECEYQKWARLGSNIIKNHTSQNHSQRV---------------LEKIKSVPMGSGME- 258
Query: 679 RDLPGVLVGP--DNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVN 736
V V +NKV Y + +P +W +
Sbjct: 259 -----VFVNKYQENKVV-------------------YCGGYRRAVKDEPSYTAYWTRGMT 294
Query: 737 TVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKE 781
++ HP + R L+ RE AR+Q FPD + G E
Sbjct: 295 SI------------HPEEHRFLSPRECARIQSFPDSFIFQGTTIE 327
>gi|166362816|ref|YP_001655089.1| cytosine specific DNA methyltransferase, partial [Microcystis
aeruginosa NIES-843]
gi|166085189|dbj|BAF99896.1| cytosine specific DNA methyltransferase [Microcystis aeruginosa
NIES-843]
Length = 261
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 122/288 (42%), Gaps = 64/288 (22%)
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
MENV +ILK GG + V L S YQ + A YG+PQ R R F + ++L
Sbjct: 1 MENVPEILKAYGGIIRDEIVAHLESWGYQVVTTSLNAAYYGVPQTRSRAFFLAS--LERL 58
Query: 556 PQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGV----LLSDAISDLPLVTNNES 611
P P TH G I ++++ + + Q LE + + DAISDLP + ++
Sbjct: 59 PSLPQATHS----GDIRSDYKAV---KSWTQLTLLEPNIAPVTTVKDAISDLPTLEAGQA 111
Query: 612 EDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIP 671
D Y T +Q+ +R + +VN + + P Q++ RV +
Sbjct: 112 YDHEIYTREPETIYQQKMREQSQKIVNHIARALT----------PIQMS-----RVQILA 156
Query: 672 KRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWW 731
+G + RDLP L P +H S +GRL W
Sbjct: 157 --EGQDARDLPA------------------------ELAPK-----KHYSGA--YGRLSW 183
Query: 732 DEIVNTVVTR--AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
D+ T +TR P + HP+Q+R +TIRE ARL +PD + G
Sbjct: 184 DKPART-ITRWFFHPGSGRFFHPTQNRTITIREAARLHSYPDHFHFLG 230
>gi|420413430|ref|ZP_14912554.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|393029417|gb|EJB30498.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
Length = 351
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 131/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKRFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G N DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQNKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ +G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYGSASAK 322
>gi|332706962|ref|ZP_08427022.1| DNA-methyltransferase [Moorea producens 3L]
gi|332354227|gb|EGJ33707.1| DNA-methyltransferase [Moorea producens 3L]
Length = 450
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 145/349 (41%), Gaps = 63/349 (18%)
Query: 437 SNILPLPGDVDFICGGPPCQGVS-GFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
S I+ PG++D + GGPPCQG S +RF +D +N L ++ + L PK+ +
Sbjct: 89 SEIVMKPGELDILIGGPPCQGFSTAGSRF------WDDPRNNLLKQYVKALTILNPKWFI 142
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
MENV +L + G A + + Y R+ + + YG+PQ R RV + G R
Sbjct: 143 MENVEGLLTSNKGKYVYEAAKAFIELGYWIRIEKIYSQEYGIPQRRKRVLIIGNRLGHDF 202
Query: 556 PQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
+ P P ++ + + N+ + +S AI+ LP T ++
Sbjct: 203 -RIPAPKFQVSGQ------------LFRNSD-------ITISHAINSLPPATKDKGTLLT 242
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+ + +F ++R + + DH +N +R+ + + G
Sbjct: 243 PLTSPPQDDFDSFLR---------------GNATQISDHYYPSINGIQLQRITAL--KPG 285
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFG--RLWWDE 733
+DLP L K R + RV G P + P G RL +E
Sbjct: 286 QTMKDLPEELQHESFKKRAN---RRV--ADGMP---------TEKRGGAPSGLKRLMGNE 331
Query: 734 IVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
T+ A R L+HP ++R LTIRE AR+Q FPD + G ++
Sbjct: 332 PSLTITGAA---TRELIHPVENRPLTIREAARIQTFPDDFVFCGNASQK 377
>gi|52788777|gb|AAU87368.1| MnlI m5C-methyltransferase [Moraxella nonliquefaciens]
Length = 351
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 146/363 (40%), Gaps = 90/363 (24%)
Query: 420 LSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQL 479
L+ C+ LK+ + K ++N +V + GGPPCQG S + + + D +N
Sbjct: 52 LTSCE--LKDEIVKIAKTN------NVRAVLGGPPCQGFS----LKGKKLGMNDSRNFLF 99
Query: 480 LVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQ 539
+++++ + P +++MENV + + + + L SM Y ++ A YG+PQ
Sbjct: 100 QEYLEIVRQVNPDFIVMENVKALTNKTNEYFLTQILTGLKSMGYFVNYQVLNAKDYGVPQ 159
Query: 540 FRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDA 599
R R+F I+A P +F I QP V + A
Sbjct: 160 SRERIF-------------------IIATKNQPFDFDAIA-----KQP-----KVTVEQA 190
Query: 600 ISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQV 659
ISDL + + E + + Y ++ +Q+ QM SLLY+H+
Sbjct: 191 ISDLNFLESGEGDFLQTYPNKPQSHYQQ---------------QMRQNSSLLYNHQATNH 235
Query: 660 NNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEH 719
++ +++ IP + LP L G + ++D +
Sbjct: 236 SSVALQKLAMIPPE--GDKTSLPAHLKG---RQKFDTT---------------------- 268
Query: 720 QSSTKPFGRLWWDEIVNTVVTRA-QPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGP 778
+GRL W + T+ TR P N HP+ R +T RE ARLQ F D + +G
Sbjct: 269 ------WGRLKWQSVSPTIDTRFDTPSNGCNSHPTLHRAITPREAARLQSFSDDFVFYGK 322
Query: 779 VKE 781
E
Sbjct: 323 KTE 325
>gi|389640887|ref|XP_003718076.1| modification methylase DdeI [Magnaporthe oryzae 70-15]
gi|351640629|gb|EHA48492.1| modification methylase DdeI [Magnaporthe oryzae 70-15]
Length = 1294
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 147/351 (41%), Gaps = 59/351 (16%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FMDVIEYLKPKYVLMEN 498
+P G+V+FI GG PCQG F+ ++ +KNR L+ F +++ +PKY L+EN
Sbjct: 825 VPSRGEVEFISGGSPCQG---FSLLTVNKSDDRQVKNRSLVASFASFVDFYRPKYGLLEN 881
Query: 499 VVDILKFS----GGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKK 554
V +++ + +L++ LV + YQ ++ + A SYG PQ R R+FL AR +
Sbjct: 882 VTNMVNANVRPDCDYLSQLFCA-LVGLGYQVQIILGDAWSYGAPQQRSRIFLSFARADFQ 940
Query: 555 LPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
LPQ P +H A IP+ + Y NN E+ V + + VT+ E+ D
Sbjct: 941 LPQIPTRSHSHTA--AIPSR----AIGYLNNG----ERFVERQFSSTAFRYVTSGEAID- 989
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
D+ + + P DHRP + + R+ IP
Sbjct: 990 --------------------DLPKIGDGRQICIP--FPDHRPNKESFVAQVRIAHIP--- 1024
Query: 675 GANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEI 734
V P + ++ + + P + E + + RL +++
Sbjct: 1025 -----------VTPYGIGFVQAYQTGRITEAERQIFPADTLTAERTRCGRGWSRLSPNKL 1073
Query: 735 VNTVVT---RAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
T+ T +HPS+ R LTI E R QG PD L G ++R
Sbjct: 1074 FQTITTTPNHTDSRTGCQIHPSEQRTLTIMEVRRAQGVPDNEVLVGQFRDR 1124
>gi|444301297|gb|AGD98764.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 354
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 134/336 (39%), Gaps = 82/336 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I G PPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +I+
Sbjct: 72 EINMIIGRPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNIIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F Y L
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRF-SFDFYLL---- 182
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+P Q V + DAISDL + +NE E Y ++
Sbjct: 183 ---------------------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 219 YQ---------------ALMRKNSPKLYNHQATNHSKAALEKLKLINKEQGK--ECLPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q + RL W+ I +T+ TR
Sbjct: 262 LHG-------------------------------EQQFKSTWRRLNWNNISHTIDTRYDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
P N H R +T R AR+Q F D Y +G +
Sbjct: 291 PSNGTNSHREMHRSITPRGAARIQSFSDNYMSYGNI 326
>gi|384887473|ref|YP_005761984.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori 52]
gi|261839303|gb|ACX99068.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori 52]
Length = 348
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 131/334 (39%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
+ + KSG T + ++WW++ T+ +
Sbjct: 253 --------------KNLRPKSG---------------YTNTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|440475172|gb|ELQ43873.1| modification methylase DdeI [Magnaporthe oryzae Y34]
gi|440487101|gb|ELQ66907.1| modification methylase DdeI [Magnaporthe oryzae P131]
Length = 1289
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 147/351 (41%), Gaps = 59/351 (16%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FMDVIEYLKPKYVLMEN 498
+P G+V+FI GG PCQG F+ ++ +KNR L+ F +++ +PKY L+EN
Sbjct: 820 VPSRGEVEFISGGSPCQG---FSLLTVNKSDDRQVKNRSLVASFASFVDFYRPKYGLLEN 876
Query: 499 VVDILKFS----GGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKK 554
V +++ + +L++ LV + YQ ++ + A SYG PQ R R+FL AR +
Sbjct: 877 VTNMVNANVRPDCDYLSQLFCA-LVGLGYQVQIILGDAWSYGAPQQRSRIFLSFARADFQ 935
Query: 555 LPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
LPQ P +H A IP+ + Y NN E+ V + + VT+ E+ D
Sbjct: 936 LPQIPTRSHSHTA--AIPSR----AIGYLNNG----ERFVERQFSSTAFRYVTSGEAID- 984
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
D+ + + P DHRP + + R+ IP
Sbjct: 985 --------------------DLPKIGDGRQICIP--FPDHRPNKESFVAQVRIAHIP--- 1019
Query: 675 GANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEI 734
V P + ++ + + P + E + + RL +++
Sbjct: 1020 -----------VTPYGIGFVQAYQTGRITEAERQIFPADTLTAERTRCGRGWSRLSPNKL 1068
Query: 735 VNTVVT---RAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
T+ T +HPS+ R LTI E R QG PD L G ++R
Sbjct: 1069 FQTITTTPNHTDSRTGCQIHPSEQRTLTIMEVRRAQGVPDNEVLVGQFRDR 1119
>gi|420530985|ref|ZP_15029360.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-28b]
gi|393139011|gb|EJC39392.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-28b]
Length = 351
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 131/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ENLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ +G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYGSASAK 322
>gi|347726862|gb|AEP19809.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 135/336 (40%), Gaps = 82/336 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I G PPCQG S N+ +N L+D +N L ++++++ +KP+ ++ENV +I+
Sbjct: 72 EINMIIGRPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNIIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQDRERAFIVGASRFSF---------- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+F + +P Q V + DAISDL + +NE E Y ++
Sbjct: 178 ---------DFNLL-------EPSQ---SVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q A M LY+H+ + E++ I K +G LP
Sbjct: 219 YQ---------------ALMRKNSPKLYNHQATNHSQAALEKLKLINKEQGKEC--LPKN 261
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L G Q + RL W+ I +T+ TR
Sbjct: 262 LHG-------------------------------EQQFKSTWRRLNWNNISHTIDTRYDT 290
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
P N H R +T R AR+Q F D Y +G +
Sbjct: 291 PSNGTNSHREMHRSITPRGAARIQSFSDNYMSYGNI 326
>gi|326772743|ref|ZP_08232027.1| modification methylase XorII [Actinomyces viscosus C505]
gi|326637375|gb|EGE38277.1| modification methylase XorII [Actinomyces viscosus C505]
Length = 364
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 130/340 (38%), Gaps = 76/340 (22%)
Query: 442 LPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVD 501
+P VD + GGPPCQG S + R+ ED +NR + VI+ +PKY ++ENV
Sbjct: 68 IPTGVDVVVGGPPCQGFSTLGK-RD----AEDARNRLWEQYAQVIQRARPKYFVVENVPA 122
Query: 502 ILKFSG--GFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
K FLA G + DY ++ A YG PQ R R L G R +P +P
Sbjct: 123 FGKSPQYRDFLAATGPGEFLE-DYSFDFRVLNAADYGAPQARRRAVLIGHRYDMAVPGFP 181
Query: 560 LPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGT 619
PTH G +P P + + LL V DER
Sbjct: 182 EPTHSPDGGGDLP--------------PYRTVRQTLLG--------VPAQPDMDER---- 215
Query: 620 VARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFR 679
+ +LR V A P L+ R + + ER IP +G N
Sbjct: 216 --------FDQLRTR--VGSRRVPGAFSPRELHVSRGYSPKSR--ERFAAIP--EGGNRA 261
Query: 680 DLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQS-STKPFGRLWWDEIVNTV 738
DLP L P W H S S GRL WD T+
Sbjct: 262 DLPDDLKAPC----W----------------------LRHTSGSMDVMGRLHWDRPSVTI 295
Query: 739 VTR-AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
T +P LHP ++R +T E A LQGFPD ++ G
Sbjct: 296 RTEFFKPEKGRYLHPVENRAITHYEAALLQGFPDTHRFIG 335
>gi|372269857|ref|ZP_09505905.1| DNA (cytosine-5-)-methyltransferase [Marinobacterium stanieri S30]
Length = 427
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 141/343 (41%), Gaps = 63/343 (18%)
Query: 443 PGDVDFICGGPPCQGVS-GFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVD 501
PG++D + GGPPCQG S +F +D +N L ++ +E ++PK+ +MENV
Sbjct: 71 PGELDILIGGPPCQGFSTAGTKF------WDDPRNHLLRSYVKALEVVRPKWFIMENVEG 124
Query: 502 ILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLP 561
+L + G A + + Y R+ + + YG+PQ R RV + G R Y LP
Sbjct: 125 LLTSNKGKYIHEAAKAFIEIGYFIRIEKVYSQEYGVPQRRKRVLIVGNRLGH---NYKLP 181
Query: 562 THEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVA 621
I G I + N+ + +S AI LP+ ++S
Sbjct: 182 EATIRVSGQI----------FRNSD-------ITISHAIDTLPVAAKSKSVSVTPITEPV 224
Query: 622 RTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDL 681
R +F +R ++ DH + ER+ + + G +DL
Sbjct: 225 RDKFDLILRGNAVEIT---------------DHYCPLIKGIQLERISAL--KPGQTMKDL 267
Query: 682 PGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFG--RLWWDEIVNTVV 739
P L K R + RV G P + P G RL +E T+
Sbjct: 268 PDHLQHESFKKRAN---RRV--ADGMP---------TEKRGGAPSGLKRLIENEPSLTIT 313
Query: 740 TRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
A R L+HP+++R LTIRE AR+Q FPD + G ++
Sbjct: 314 GAAI---RELIHPTENRPLTIREAARIQTFPDDFIFCGTASQK 353
>gi|226223282|ref|YP_002757389.1| type II DNA modification enzyme (methyltransferase) [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|406703438|ref|YP_006753792.1| C-5 cytosine-specific DNA methylase [Listeria monocytogenes L312]
gi|225875744|emb|CAS04447.1| Putative type II DNA modification enzyme (methyltransferase)
[Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|406360468|emb|CBY66741.1| C-5 cytosine-specific DNA methylase [Listeria monocytogenes L312]
Length = 389
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 138/344 (40%), Gaps = 80/344 (23%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
++D + GGPPCQ S R + + A + R++L F L+PK L ENV +L
Sbjct: 80 NIDLVIGGPPCQSFSTVGRRQYDEKATMYKEYRRMLSF------LQPKVFLFENVTGLLT 133
Query: 505 FSGGFL------ARYAVGRL----VSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKK 554
R G + + Y+ R ++ A +G+PQ R RVFL G R +
Sbjct: 134 MKNDEGEPVLEDIRKEFGDFSDFEIDLTYEIRETVLNAKHFGVPQNRERVFLLGIRKDLE 193
Query: 555 LPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
+ Q E R + ++F + L DAI DLP + N E +D
Sbjct: 194 IKQ----NWEFPERLLFEDDF------------------LTLEDAIGDLPALRNGERKD- 230
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
Y T +Q +R + ++L DH N + E++ I +
Sbjct: 231 -AYDGDPYTPYQNLMR---------------NNSTILMDH----FNGLNGEKMLRIMETV 270
Query: 675 GANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEI 734
+PG + K + +E L S L Y + +LWWD
Sbjct: 271 ------IPG-----EGKKYINELVESGQLDSKYYLTSGY---------NNTYSKLWWDRP 310
Query: 735 VNTVVTR-AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+T+ + P + +HP Q+R LT RE AR+Q FPD +Q G
Sbjct: 311 SSTITNNLSTPSSFRCIHPIQNRALTPREGARIQSFPDTFQFVG 354
>gi|417787172|ref|ZP_12434855.1| DNA-cytosine methyltransferase [Lactobacillus salivarius NIAS840]
gi|334307349|gb|EGL98335.1| DNA-cytosine methyltransferase [Lactobacillus salivarius NIAS840]
Length = 366
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 135/340 (39%), Gaps = 78/340 (22%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+ + I GGPPCQG S RN + D +N + ++++ +KPK +MENV +L
Sbjct: 66 EAEVIIGGPPCQGFS-MAGARNRDGFMGDPRNYLFKHYFNIVKKVKPKVFIMENVKGLLS 124
Query: 505 FSGGFLARYAVG------RLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQY 558
S G + R + RL Y ++ A +G+PQ R R+ + G
Sbjct: 125 MSKGEIFREIISIFSDKERLDGDSYTLYSRVVKAVEFGIPQKRERLIIVG---------- 174
Query: 559 PLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYG 618
+ E V I E + I N V L+DAIS+LPL T N D +
Sbjct: 175 -VLNKENVNFAEIWEETKRKIKVSDKN----FFDNVTLADAISNLPLPTENGIIDAPE-- 227
Query: 619 TVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANF 678
+T ++K + + +Y+H + ER+ I + G NF
Sbjct: 228 --PKTNYEKEL----------------FKEGKIYNHIKRHHSKKVLERLSKI--KTGDNF 267
Query: 679 RDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTV 738
+ L + +K H S +GR+ WDE T+
Sbjct: 268 KSL------------------------------NENIKSIHSGS---YGRMSWDEPTMTI 294
Query: 739 VTRA-QPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
TR P P QDR LT RE AR+Q FPD Y+ +G
Sbjct: 295 TTRFDTPSGGRFTLPDQDRTLTAREAARVQSFPDDYRFYG 334
>gi|387782130|ref|YP_005792843.1| type II m5C methylase [Helicobacter pylori 51]
gi|261837889|gb|ACX97655.1| type II m5C methylase [Helicobacter pylori 51]
Length = 348
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L G + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGTLKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKAHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG T + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YTNTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|420423359|ref|ZP_14922432.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-4]
gi|393042639|gb|EJB43648.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-4]
Length = 351
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLISM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|363580908|ref|ZP_09313718.1| DNA-cytosine methyltransferase [Flavobacteriaceae bacterium HQM9]
Length = 346
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 133/329 (40%), Gaps = 87/329 (26%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+VD I GGPPCQG S + +ED +N+ F++ +E+ KPK LMENV +I+
Sbjct: 72 EVDVIIGGPPCQGFSIAGK-----RIIEDERNQLYKTFVNFVEHFKPKAFLMENVPNIMS 126
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
G + + ++ Y+ I+ A YG+PQ R R F G + + ++P+PT
Sbjct: 127 MGNGVIRNQIIKDFENLGYKVSHQILLASDYGVPQNRKRAFFVGLKNGSEF-KFPIPT-- 183
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
PN + +AISDL T + D Y ++
Sbjct: 184 ------TPNN------------------KITSEEAISDL---TEHTVNDGTPYLDKYKSS 216
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
FQK QM + +++H+ + E + +P G N+++LP
Sbjct: 217 FQK---------------QMRNGNKFIFNHQITEHKEKTIEIIAMVP--DGGNYKNLPKE 259
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQP 744
L ++ R ++ L S KP T+ T +
Sbjct: 260 L----HETR-KVNIAWTRLNSQKPSF--------------------------TIDTGHRH 288
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCY 773
H H +RV T+RE+AR+Q FPD +
Sbjct: 289 H----FHYEFNRVPTVRESARIQSFPDDF 313
>gi|385226718|ref|YP_005786642.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori SNT49]
gi|344331631|gb|AEN16661.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori SNT49]
Length = 351
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 131/334 (39%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ ++P P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFKQKFRFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG T + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YTNTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDDYKFCG 317
>gi|420478963|ref|ZP_14977615.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-34]
gi|393096518|gb|EJB97116.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-34]
Length = 351
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 132/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFIFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALKSFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T++ +
Sbjct: 253 --------------ENLRPKSG---------------YINTYAKMWWEKPAPTIIRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ +G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYGSASAK 322
>gi|365120060|ref|ZP_09337880.1| DNA (cytosine-5-)-methyltransferase [Tannerella sp. 6_1_58FAA_CT1]
gi|363647912|gb|EHL87106.1| DNA (cytosine-5-)-methyltransferase [Tannerella sp. 6_1_58FAA_CT1]
Length = 334
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 143/338 (42%), Gaps = 76/338 (22%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
GDVD I GGPPCQG S NR+ Q +ED +N+ ++ ++ + PK +++ENV +L
Sbjct: 70 GDVDVIVGGPPCQGFSSANRW---QKEMEDPRNKLFFEYIRFVQKIHPKVIMIENVRGLL 126
Query: 504 KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
G+ L + +Y ++ A YG+PQ R R + G R
Sbjct: 127 TRDNGYAIERIKEILGAEEYNITYQVLDASEYGVPQNRKRAIIVGVR------------- 173
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVART 623
++++I ++ + ++ + DAI +L + ++ T A T
Sbjct: 174 ---------KDYKDIKFDFSK---IEKQEKTTVEDAIGEL-YCFEQSPDGVKQISTPADT 220
Query: 624 EFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPG 683
+K++R + + +++ ++Y + Q +R+ +P +G N++++P
Sbjct: 221 PLRKFLRTKDNSILD---------QDIVYPAQKVQ------DRIKHVP--QGGNWQNVPA 263
Query: 684 VLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQ 743
L + + R + +R+ ++ QS T +
Sbjct: 264 ELWPTNRQNRHSSAYKRLDPRT--------------QSCT---------------IDTGN 294
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKE 781
H+ HP R+ TIRE+ARLQ FPD ++ G E
Sbjct: 295 AHSN-YFHPLFHRIPTIRESARLQSFPDSFEFQGQSAE 331
>gi|303236368|ref|ZP_07322958.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN]
gi|302483426|gb|EFL46431.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN]
Length = 357
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 126/332 (37%), Gaps = 82/332 (24%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D I GGPPCQG S P+ ED +N+ L ++ + +PK L+ENV +
Sbjct: 76 IDVIIGGPPCQGFS----LTGPRN-FEDKRNKLYLAMIETVHRYQPKAFLIENVPGMANL 130
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
G + + R +M Y I+ A YG+PQ R R+ G + K+ ++P P
Sbjct: 131 YKGAVKDEIIRRFTAMGYNVSCQIVCAADYGVPQIRKRLVFVGLKNNKEKFEFPEPL--- 187
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
+ E + AISDLP + + + Y TE+
Sbjct: 188 ----------------------LKEEAYITCKQAISDLPPLVDELGSEVSTYCEEPETEY 225
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
Q+ +M +LY+H VN+ D+ + G N++DLP
Sbjct: 226 QR---------------KMRKNCDVLYNH--VAVNHKDFVKQVISQVPDGGNYKDLP--- 265
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPH 745
G ++ M + +S KP ++T
Sbjct: 266 -------------------EGVGTSRNFHMAWTRYASNKP------SRTIDT-------G 293
Query: 746 NRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+R H +R T+RE+ARLQ FPD + G
Sbjct: 294 HRNNFHYKWNRCPTVRESARLQSFPDDFVFTG 325
>gi|420480501|ref|ZP_14979145.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1]
gi|420510945|ref|ZP_15009434.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1b]
gi|393098414|gb|EJB99006.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1]
gi|393121453|gb|EJC21936.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1b]
Length = 351
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFIFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQMRERVILVGALKSFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|420404923|ref|ZP_14904103.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6271]
gi|393024793|gb|EJB25903.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6271]
Length = 351
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RVFL G + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVFLVGVLKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
+ + KSG T + ++WW++ T+ +
Sbjct: 253 --------------KNLRPKSG---------------YTNTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|420438503|ref|ZP_14937477.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-29]
gi|393056103|gb|EJB57015.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-29]
Length = 351
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKRFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|331085773|ref|ZP_08334856.1| hypothetical protein HMPREF0987_01159 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406696|gb|EGG86201.1| hypothetical protein HMPREF0987_01159 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 356
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 127/332 (38%), Gaps = 82/332 (24%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D I GPPCQG S P+ +D +N+ L +++++ +PK ++ENV +
Sbjct: 70 IDVIIAGPPCQGFS----LTGPRN-FDDERNKLYLAVIEMVKQYQPKAFIIENVPGMATL 124
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
G + + R M Y I+ A YG+PQ R R+ G R P++P
Sbjct: 125 YKGQIKDEILRRFKKMGYNIECRILCAADYGVPQIRKRLIFMGIRKDIGAPKFP------ 178
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
E+ + N C+ A+SDLP + N+ +E +Y +TE+
Sbjct: 179 -----------EVKLTPENYITCRA--------AVSDLPSLQNDLGMEEAEYIREPQTEY 219
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
Q+ +R ++L++H + + +P +G N++DLP
Sbjct: 220 QRLMR---------------GNCTVLHNHLGTNHTQMVKDTIALVP--EGGNYKDLP--- 259
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPH 745
E ++ F W N
Sbjct: 260 --------------------------------EGWGESRKFHMAWTRLNGNAPARTVDTG 287
Query: 746 NRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+R L H +RV T+RE+AR+Q FPD + G
Sbjct: 288 HRNLFHYEYNRVPTVRESARMQSFPDDFVFLG 319
>gi|422855124|ref|ZP_16901782.1| modification methylase DdeI [Streptococcus sanguinis SK1]
gi|327463101|gb|EGF09422.1| modification methylase DdeI [Streptococcus sanguinis SK1]
Length = 351
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 137/352 (38%), Gaps = 103/352 (29%)
Query: 435 YRSNILPLPGD--VDFICGGPPCQG--VSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLK 490
Y +I P+ G+ VD I GGPPCQG +SG +F +P +N+ L ++ ++ ++
Sbjct: 60 YEEDIKPIIGEQKVDLIVGGPPCQGMSLSGPRKFDDP-------RNKLYLSYIRLVREIQ 112
Query: 491 PKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR 550
P ++ENV+ I+ G + + M Y+ + ++ A YG+PQ R RV G +
Sbjct: 113 PTAFVIENVIGIVSLFKGHIKDAIIEEFSKMGYKVQFKVLLASDYGVPQNRKRVIFVGTK 172
Query: 551 PFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNE 610
N+ E P L + A+SDLP + N
Sbjct: 173 ----------------------NDGFEY--------PTSLGTTITTEMALSDLPTLENEL 202
Query: 611 SEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCI 670
+ E Y + + +QK +R + V+N +A+ + + + + +
Sbjct: 203 GDAEMVYVSEPKNNYQKLMRKQSSVVLNHIAAKHSEKVT---------------STIALV 247
Query: 671 PKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLW 730
P G N+++LP E ++ F W
Sbjct: 248 P--DGGNYKNLP-----------------------------------EELRESRKFNVAW 270
Query: 731 -----WDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
W T+ T + H H +RV T+RE+ARLQ FPD + +G
Sbjct: 271 TRFASWKP-APTIDTGHRHH----FHYKYNRVPTVRESARLQSFPDDFIFYG 317
>gi|420519255|ref|ZP_15017699.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-5b]
gi|393128347|gb|EJC28791.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-5b]
Length = 351
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALKRFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINAYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|420406668|ref|ZP_14905838.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6311]
gi|393023505|gb|EJB24619.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6311]
Length = 351
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RVFL G + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVFLVGVLKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
+ + KSG T + ++WW++ T+ +
Sbjct: 253 --------------KNLRPKSG---------------YTNTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|253827583|ref|ZP_04870468.1| putative methylase [Helicobacter canadensis MIT 98-5491]
gi|313141791|ref|ZP_07803984.1| cytosine-specific DNA methyltransferase [Helicobacter canadensis
MIT 98-5491]
gi|253510989|gb|EES89648.1| putative methylase [Helicobacter canadensis MIT 98-5491]
gi|313130822|gb|EFR48439.1| cytosine-specific DNA methyltransferase [Helicobacter canadensis
MIT 98-5491]
Length = 589
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 136/336 (40%), Gaps = 91/336 (27%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
V+ + GGPPCQG S + L D +N L +++++E + P+ ++ENV ++
Sbjct: 72 VNMVIGGPPCQGFS----LKGKNLGLADERNFLFLEYLELVEKVNPEIFIIENVKNLYNA 127
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
G+ + ++ +M Y I+ A YG+PQ R RVF + ++L +P ++ +
Sbjct: 128 VNGYFREEIIKKIKNMGYVVNCKILNAKHYGVPQNRERVFFIAHK--ERLLSFPKESNCL 185
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
V+ + DAISDL + + E + +Y ++++
Sbjct: 186 VS----------------------------VKDAISDLNYLESGEGTIQAEYKIEPQSDY 217
Query: 626 QKYI---RLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLP 682
QK + RL+ H N S A I K K
Sbjct: 218 QKIMRADRLQYHIASNHSKA--------------------------AINKLK-------- 243
Query: 683 GVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA 742
++ P+ GK +P + + S+T +GRL WD++ T+ TR
Sbjct: 244 --MIAPE---------------CGKECLPTHLHGKQKFSTT--WGRLVWDDVSPTIDTRF 284
Query: 743 -QPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP R +T RE AR+Q F D + G
Sbjct: 285 DTPSNGKNSHPVLHRAITPREAARIQSFDDNFYFKG 320
>gi|428781246|ref|YP_007173032.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
gi|428695525|gb|AFZ51675.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
Length = 433
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 137/344 (39%), Gaps = 80/344 (23%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
D+D +CGGPPCQG S + L+D +N + F+ ++ LKPKY +MENV +
Sbjct: 79 DIDVVCGGPPCQGFSLIGK-----RVLDDERNSLVFHFLRLVLELKPKYFVMENVAGMGI 133
Query: 505 FSGGFLARYAVGRLVSMDYQTRL--GIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
L + + YQ +L ++ A ++G+PQ R R+FL G R + LP YP P
Sbjct: 134 GKSQQLLEELIKKFQENGYQVQLPYQVLNASNFGVPQNRKRLFLLGCRQDQTLPNYPKPM 193
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVAR 622
+ P E + +++ C L + DAI DLP
Sbjct: 194 TK-------PPEAKVMLLN------CYLPNSPTVEDAIIDLP------------------ 222
Query: 623 TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVN---NDDYERVCCIPKRKGANFR 679
E + Y L D V Q PS + R + N +DD+ P+
Sbjct: 223 -EIENYPELLHQDTVKADFGQ----PS--FYSRQLRQNGKTDDDFS----YPR------- 264
Query: 680 DLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLW--WDEIVNT 737
++ S+ L++ + K T+P R + + ++
Sbjct: 265 -------------YYNSSLLTASLRTKHTEKSIFRFKATPPGKTEPVSRFYKLHPQGISN 311
Query: 738 VVTRAQPHNRIL------LHPSQDRVLTIRENARLQGFPDCYQL 775
+ P NR +HP R +T+RE ARL +PD ++
Sbjct: 312 TLRAGTPSNRGAYTSPRPIHPYHPRCITVREAARLHSYPDWFRF 355
>gi|420502448|ref|ZP_15000989.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-41]
gi|393153728|gb|EJC54021.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-41]
Length = 351
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|358394495|gb|EHK43888.1| hypothetical protein TRIATDRAFT_36027 [Trichoderma atroviride IMI
206040]
Length = 1253
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 145/372 (38%), Gaps = 63/372 (16%)
Query: 425 EKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FM 483
+ L+ +G + +P GDVDFI GG PC GF+ N + KN+ L+ F
Sbjct: 790 DDLQRLSMQGDFAKNVPQIGDVDFISGGSPC---PGFSALTNDKTTAAQRKNQSLVAAFA 846
Query: 484 DVIEYLKPKYVLMENVVDILKFSGGF---LARYAVGRLVSMDYQTRLGIMAAGSYGLPQF 540
++ +PKY ++ENV I+ + + LV + YQT + A S G PQ
Sbjct: 847 SFVDLYRPKYGVLENVPGIVNKKTARDQDVFSQLICALVGLGYQTHFFFLDASSCGSPQR 906
Query: 541 RLRVFLWGARPFKKLPQYPLPTHEIVAR------GVIPNEFQEIIVAYANNQPCQLEKGV 594
R R+F+ A P +LP+ P TH A G +PN P K V
Sbjct: 907 RPRIFVVFAAPGLELPKKPPHTHSHPANTRELGIGYLPNGQSMAAREMPTATPF---KYV 963
Query: 595 LLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDH 654
+A+SDLP + + + + Y DH
Sbjct: 964 TAEEAVSDLPAIHDAQPDICVPYP----------------------------------DH 989
Query: 655 RPFQVNNDDYE-RVCCIPKRKGANFRDLPGVLVGPDNK-----VRWDPSMERVMLKSGKP 708
RP + + R+ IP + D G D + ER M K
Sbjct: 990 RPTRGHTKTQRARISAIPTQPWG--MDFATAWYGQDRSKGQAGAGAMTAAERDMFY--KA 1045
Query: 709 LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQP---HNRILLHPSQDRVLTIRENAR 765
P ++K +GR++ +++ T+VT P N +LH ++R++T+ E R
Sbjct: 1046 SSPSSKEPMNTLPASKAYGRMFPNKLFETIVTATTPTDAKNGRVLHWRENRLITVMEARR 1105
Query: 766 LQGFPDCYQLFG 777
QGF D L G
Sbjct: 1106 AQGFRDEEVLLG 1117
>gi|357390490|ref|YP_004905331.1| putative DNA methyltransferase [Kitasatospora setae KM-6054]
gi|311896967|dbj|BAJ29375.1| putative DNA methyltransferase [Kitasatospora setae KM-6054]
Length = 676
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 146/362 (40%), Gaps = 97/362 (26%)
Query: 441 PLPGDVDFICGGPPCQGVSGFNRF----------RNPQAALEDIKNRQLLVFMDVIEYLK 490
P G +D + GGPPCQ S R RNP D++ ++ +IE +K
Sbjct: 119 PAAGRIDLVAGGPPCQPFSRAGRSKIRDLVENHGRNPV----DLRKELWRSYLRIIEVVK 174
Query: 491 PKYVLMENVVDILKFSGGF-LARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA 549
P+ VLMENV D + S F + R+ RL + Y T++ ++ A YG+PQ R R+ L
Sbjct: 175 PRAVLMENVPD-MGLSDDFRVVRFIEQRLENAGYATQVRLVDAWRYGVPQHRKRLIL--- 230
Query: 550 RPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLP--LVT 607
+AR N+ ++ + +P Q + V L +AI+DLP LV
Sbjct: 231 ----------------LAR----NDVEQF-----DWEPDQ--EPVTLREAIADLPPLLVA 263
Query: 608 NNESEDERKY------GTVARTEF------QKYIRLRRHDVVNLSSAQMASRPSLLYDHR 655
E R Y V RT + ++ R V S + +++DH
Sbjct: 264 TEEYAGGRPYILPTERVGVRRTPYVPSPAPSAFVAKMREGVEQDQSEE------VVWDHM 317
Query: 656 PFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAM 715
+V DD+E +ME L S V +
Sbjct: 318 TRRVRKDDWEIFS----------------------------TMESDTLYSA---VDESLR 346
Query: 716 KFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
++ S T + +L W + ++ +HP Q+R LTIRE AR+Q FPD ++
Sbjct: 347 RYRADSFTDKYKKLDWAQRSRSITAHIAKDGYWYIHPDQNRTLTIREAARIQTFPDWFRF 406
Query: 776 FG 777
G
Sbjct: 407 AG 408
>gi|228473386|ref|ZP_04058140.1| Cytosine-specific methyltransferase HphIA [Capnocytophaga
gingivalis ATCC 33624]
gi|228275288|gb|EEK14086.1| Cytosine-specific methyltransferase HphIA [Capnocytophaga
gingivalis ATCC 33624]
Length = 358
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 138/340 (40%), Gaps = 88/340 (25%)
Query: 446 VDFICGGPPCQGVSGFN-RFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
V I GGPPCQG S N R RN +++ N L F+ ++ LKP + ++ENV +
Sbjct: 68 VFIIMGGPPCQGFSLSNTRTRN----MQNENNFLFLEFVRFVQELKPTWFVLENVWGLTN 123
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
G ++ Y+ ++ A YG+PQ R R F+ G R H
Sbjct: 124 MEEGKTKNMIEDCFRALGYEVNSQVLWASDYGVPQNRNRFFMVGNR------------HG 171
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I EF+ P EK + + +AI DLP + N E ++ KY V +E
Sbjct: 172 I--------EFEF---------PEPFEKKITVEEAIGDLPDLDNGEMLEKGKY-KVPCSE 213
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQ-----VNNDDYERVCCIPKRKGANFR 679
+Y +L R + H P Q NN +R I ++G N+R
Sbjct: 214 ASEYAQLMRE-----------------HSHYPTQNFVSRNNNLVIQRYTHI--KQGQNWR 254
Query: 680 DLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVV 739
+P L+ +YA K S + RL D+ V
Sbjct: 255 AIP------------------------DELMQNYADKGRTHSGI--YKRLIADQ---PSV 285
Query: 740 TRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
+ +L+HP QDR L++RE ARLQ FPD + GP+
Sbjct: 286 VISNYRKSMLIHPYQDRGLSVREAARLQSFPDDFYFEGPI 325
Score = 42.7 bits (99), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 16/87 (18%)
Query: 265 LDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV-RNEAADDFL 323
+D++SG G GL +GA ++G+++ + I+INP A KS NH KV + + D
Sbjct: 5 IDIFSGAG----GLSLGAEMAGIQIC--YGIEINPSAAKSFTRNHKGAKVLQGDIKDIDP 58
Query: 324 SLLKE---------WAKLCQYFSIYDT 341
S LKE CQ FS+ +T
Sbjct: 59 SKLKEGIDPVFIIMGGPPCQGFSLSNT 85
>gi|217033040|ref|ZP_03438509.1| hypothetical protein HPB128_193g7 [Helicobacter pylori B128]
gi|298736593|ref|YP_003729119.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
gi|216945239|gb|EEC23921.1| hypothetical protein HPB128_193g7 [Helicobacter pylori B128]
gi|298355783|emb|CBI66655.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
Length = 351
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 131/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
++ + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 INILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + DY I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERDYILEHAILNALDYGVPQIRERVILVGALKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ G +
Sbjct: 284 PSSSRCIHPRDSRALSIRERARLQSFPDNYKFCGSASAK 322
>gi|420412053|ref|ZP_14911182.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4228]
gi|420416683|ref|ZP_14915792.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
gi|393027711|gb|EJB28799.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4228]
gi|393037112|gb|EJB38150.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
Length = 351
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 131/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALKSFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ +G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYGSASAK 322
>gi|385216117|ref|YP_005776074.1| Type II DNA modification enzyme [Helicobacter pylori F32]
gi|317180646|dbj|BAJ58432.1| Type II DNA modification enzyme [Helicobacter pylori F32]
Length = 348
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 131/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
+ + KSG T + ++WW++ T+ +
Sbjct: 253 --------------KNLRPKSG---------------YTNTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGSASAK 322
>gi|15611502|ref|NP_223153.1| type II DNA modification (methyltransferase [Helicobacter pylori
J99]
gi|4154963|gb|AAD06007.1| TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE) [Helicobacter
pylori J99]
Length = 351
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALKSFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|2894387|emb|CAA74997.1| Bpu10I (5m)cytosine-specific DNA modification methyltransferase
(C2) [Bacillus pumilus]
Length = 392
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 143/347 (41%), Gaps = 73/347 (21%)
Query: 437 SNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLM 496
S I+ L VD I GGPPCQ GF+ Q + D +N ++ LKP V++
Sbjct: 59 SEIIKLFKGVDIITGGPPCQ---GFSVAGPSQYGIIDNRNNLIMEMYRFASILKPNLVIL 115
Query: 497 ENVVDILKF----SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPF 552
ENV IL + L Y + + ++ Y+ ++ ++ +G+PQ R RVF+ AR
Sbjct: 116 ENVKGILNGKLSPTKKALDEY-MNNMSNIGYKIKVFVLNTSDFGVPQGRQRVFVIAARNE 174
Query: 553 KKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNES- 611
+P EII Y + + G +A+ DLPL+ + E
Sbjct: 175 AFIP-------------------LEIIGEYTQGKKAKRTVG----EALEDLPLIDSGEGV 211
Query: 612 EDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIP 671
ED Y A+T++QK++R V N + + R + H
Sbjct: 212 EDAVTYPFEAKTDYQKWLREGSIGVYNHVAMKHTKRLIERFKHIDI-------------- 257
Query: 672 KRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWW 731
G + +D V P++ R ++G+ L K +Q P G
Sbjct: 258 ---GQSLKD-----VNPEHGQRA---------RNGQELDVRKRFKMNNQ-RLNPLG---- 295
Query: 732 DEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGP 778
++T +T + N +HP +R LT RE ARLQ FPD + GP
Sbjct: 296 ---ISTAITASFQSN--FIHPYLNRNLTAREGARLQSFPDKFIFCGP 337
>gi|420399961|ref|ZP_14899165.1| cytosine-specific methyltransferase [Helicobacter pylori CPY3281]
gi|393019502|gb|EJB20645.1| cytosine-specific methyltransferase [Helicobacter pylori CPY3281]
Length = 351
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLQLLDLVKPKMFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
+ + KSG T + ++WW++ T+ +
Sbjct: 253 --------------KNLRPKSG---------------YTNTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L++RE ARLQ FPD Y+ G
Sbjct: 284 PSSSRCIHPRDSRALSVREGARLQSFPDNYKFCG 317
>gi|420465164|ref|ZP_14963931.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-6]
gi|393082651|gb|EJB83367.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-6]
Length = 351
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKRFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ENLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|384899203|ref|YP_005774583.1| Type II DNA modification enzyme [Helicobacter pylori F30]
gi|317179147|dbj|BAJ56935.1| Type II DNA modification enzyme [Helicobacter pylori F30]
Length = 351
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
+ + KSG T + ++WW++ T+ +
Sbjct: 253 --------------KNLRPKSG---------------YTNTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|386755513|ref|YP_006228730.1| type II DNA modification (methyltransferase) [Helicobacter pylori
PeCan18]
gi|384561771|gb|AFI02237.1| type II DNA modification (methyltransferase) [Helicobacter pylori
PeCan18]
Length = 351
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 131/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALKSFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNI 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ENLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ +G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYRFYGSASAK 322
>gi|420485505|ref|ZP_14984123.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4]
gi|420515995|ref|ZP_15014458.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4c]
gi|420517700|ref|ZP_15016154.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4d]
gi|393103640|gb|EJC04203.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4]
gi|393123199|gb|EJC23668.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4d]
gi|393124294|gb|EJC24762.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4c]
Length = 351
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|352094116|ref|ZP_08955287.1| DNA-cytosine methyltransferase [Synechococcus sp. WH 8016]
gi|351680456|gb|EHA63588.1| DNA-cytosine methyltransferase [Synechococcus sp. WH 8016]
Length = 680
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 142/353 (40%), Gaps = 60/353 (16%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRN-------PQAALEDIKNRQLLVFMDVIEYLKPKYVLM 496
G+V + GGPPCQ S R+R L + + F+ V+E + P+ LM
Sbjct: 114 GEVALVAGGPPCQPFSRNIRWRKHDDDVIEQHKELNEGRRELWESFLTVVEGVMPRAFLM 173
Query: 497 ENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR-PFKKL 555
ENV DI + + R V R + Y+ ++ A +G+PQ R R+F+ G R P K
Sbjct: 174 ENVPDIAQTGDQEVFRGIVSRAEAAGYRVHARLVHAWEHGVPQLRPRLFIAGTRLPNAKG 233
Query: 556 PQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTN------N 609
Y P + + LE+ V L +AI DLP + N
Sbjct: 234 NSYCSP------------------LVWPEPSCSSLEEAVSLEEAIGDLPELKGDWWEKWN 275
Query: 610 ESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCC 669
E+ D R G +QK +R + + +L+DH +V DD E
Sbjct: 276 ETCDYRGPGNA----YQKLMR-----------SWLPVDRDVLHDHITRKVRGDDLETFQL 320
Query: 670 IPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRL 729
+ + G + +L + + R+ ++ + GK L K S + + L
Sbjct: 321 M-RDTGLRYHEL------SEEQRRY--AVTSRAKREGKLL----NRKDRESSFSNKYNIL 367
Query: 730 WWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
E TV +HP Q+R L+IRE AR+Q FPD ++ G R
Sbjct: 368 KGKEPCLTVTAHMAKDGYWYIHPQQNRTLSIREAARVQSFPDGFRFHGTPSNR 420
>gi|343520342|ref|ZP_08757311.1| DNA (cytosine-5-)-methyltransferase [Parvimonas sp. oral taxon 393
str. F0440]
gi|343397300|gb|EGV09834.1| DNA (cytosine-5-)-methyltransferase [Parvimonas sp. oral taxon 393
str. F0440]
Length = 599
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 130/337 (38%), Gaps = 80/337 (23%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
V+ I G PPC+ + + AL D KN LL F+ ++ L P+ L+ENV +I+
Sbjct: 76 VNMIVGEPPCKSFASTGK----GLALSDNKNALLLDFIYMVRRLNPEIFLIENVKNIISA 131
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
+ GF V M Y I+ A +G+PQ R R + G + F
Sbjct: 132 TNGFFIDEIVKTFQLMGYNVEYCILDASDFGVPQNRERAVIIGCKDF-----------SF 180
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
+I E+++I V +AISDL + + E + Y A +++
Sbjct: 181 DFENLIREEYKKISV----------------REAISDLAFLESGEGNNLAVYKNFAESDY 224
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
QK +R + +LY+H + + +++ IP
Sbjct: 225 QKTLR---------------NPEGILYNHIATNHSKNSLKKLSMIP-------------- 255
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QP 744
P+ KS P+ KF+ S RL WD+ + TR P
Sbjct: 256 --PEGD------------KSSLPIELHGNQKFKTTWS-----RLEWDKPSPAIDTRFDTP 296
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKE 781
N HP +R +T RE ARLQ FPD Y G E
Sbjct: 297 SNGKNSHPYLNRAITPREAARLQSFPDSYYFCGSKTE 333
>gi|385218742|ref|YP_005780217.1| type II DNA modification (methyltransferase) [Helicobacter pylori
Gambia94/24]
gi|317013900|gb|ADU81336.1| type II DNA modification (methyltransferase) [Helicobacter pylori
Gambia94/24]
Length = 351
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNI 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ENLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|386752472|ref|YP_006225691.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi169]
gi|384558730|gb|AFH99197.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi169]
Length = 348
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 131/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
+ + KSG T + ++WW++ T+ +
Sbjct: 253 --------------KNLRPKSG---------------YTNTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L++RE ARLQ FPD Y+ G +
Sbjct: 284 PSSSRCIHPRDSRALSVREGARLQSFPDNYKFCGSTSAK 322
>gi|421714623|ref|ZP_16153944.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R036d]
gi|407218308|gb|EKE88137.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R036d]
Length = 351
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L G + FK+ +P P
Sbjct: 121 QKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGVLKRFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG T + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YTNTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|428776676|ref|YP_007168463.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
gi|428690955|gb|AFZ44249.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
Length = 430
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 425 EKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMD 484
+ +K + R + L ++D +CGGPPCQG S + LED +N + F+
Sbjct: 58 QDVKHLTGQKIRQSSLIKDQEIDVVCGGPPCQGFSLIGK-----RVLEDERNALVFHFLR 112
Query: 485 VIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRL--GIMAAGSYGLPQFRL 542
++ LKPKY +MENV + L + + DY+ +L ++ A ++G+PQ R
Sbjct: 113 LVLELKPKYFVMENVAGMAIGKSQQLLNELIEKFQKNDYKVQLPYQVLNASNFGVPQNRN 172
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISD 602
R+FL G R + LP YP+P + P + Q AN+ + DA+ D
Sbjct: 173 RLFLLGCRSDQTLPDYPIPITQ-------PAKSQ------ANSINGHQPDSPTVKDALID 219
Query: 603 LPLVTN 608
LPL+ N
Sbjct: 220 LPLIEN 225
>gi|2952277|gb|AAC05484.1| chromomethylase CMT2 [Brassica oleracea var. italica]
Length = 62
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 50/61 (81%)
Query: 459 SGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRL 518
SG+NRFR+ + L D +N+Q++VFMD++EYLKPK+VLMENVVDIL+ G L RYA+ RL
Sbjct: 1 SGYNRFRDVDSPLTDERNQQIVVFMDIVEYLKPKFVLMENVVDILRLDKGSLGRYALSRL 60
Query: 519 V 519
V
Sbjct: 61 V 61
>gi|420432040|ref|ZP_14931059.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-16]
gi|393049633|gb|EJB50599.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-16]
Length = 351
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNI 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ENLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|420456726|ref|ZP_14955547.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-16]
gi|393075357|gb|EJB76112.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-16]
Length = 351
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 129/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L G + FK+ +P P
Sbjct: 121 QKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGVLKRFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G N DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQNKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|423068121|ref|ZP_17056909.1| hypothetical protein HMPREF9682_00130 [Streptococcus intermedius
F0395]
gi|355367012|gb|EHG14725.1| hypothetical protein HMPREF9682_00130 [Streptococcus intermedius
F0395]
Length = 351
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 133/335 (39%), Gaps = 74/335 (22%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
++D I GGPPCQ S R N D + ++D ++ KPK+ + ENV +L
Sbjct: 42 ELDGIIGGPPCQAYSTIGRANNKSKKSTDKRIYLYKHYLDFLDKYKPKFFVFENVKGLLS 101
Query: 505 F---SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLP 561
F SG L + Y+ I+ A +YG+ Q R R+ L G R K L
Sbjct: 102 FKDLSGELLLPKIICEFDKCGYEVDYQIVDASNYGVVQKRERLILVGHR--KDL------ 153
Query: 562 THEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVA 621
V N F + + Y P + + DLP + + S KY
Sbjct: 154 --------VFDNSFFDCLAEYVEAAPT-------IKELFEDLPSIKSGGS--SHKYRCDV 196
Query: 622 RTEF-QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFR- 679
++F +KYIR ++ D++ +A RP N+ ++ K+KG N R
Sbjct: 197 SSQFVEKYIR-KKDDILTQHAA------------RPHNENDLKIYKLVLRAKKKGKNLRY 243
Query: 680 -DLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTV 738
D+P L N + ++R + L + + +TV
Sbjct: 244 IDIPEELQTHSNTTSF---LDR-------------------------YKALDYGSVSHTV 275
Query: 739 VTRAQPHNRILLHPS--QDRVLTIRENARLQGFPD 771
V +HP Q+R +T+RE AR+QGFPD
Sbjct: 276 VAHIAKDGHYYIHPDLRQNRSITVREAARIQGFPD 310
>gi|420522621|ref|ZP_15021045.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-11b]
gi|393129578|gb|EJC30012.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-11b]
Length = 326
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 129/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 42 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 95
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L G + FK+ +P P
Sbjct: 96 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGIHKSFKQKFHFPKP--- 152
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 153 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 187
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 188 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 227
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 228 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 258
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 259 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 292
>gi|420458340|ref|ZP_14957150.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-26]
gi|393075861|gb|EJB76615.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-26]
Length = 351
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKRFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|420490495|ref|ZP_14989081.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-13]
gi|420524322|ref|ZP_15022732.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-13b]
gi|393109838|gb|EJC10369.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-13]
gi|393133481|gb|EJC33898.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-13b]
Length = 351
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 131/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALKSFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNI 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ +G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYGSASAK 322
>gi|400292323|ref|ZP_10794277.1| DNA (cytosine-5-)-methyltransferase [Actinomyces naeslundii str.
Howell 279]
gi|399902570|gb|EJN85371.1| DNA (cytosine-5-)-methyltransferase [Actinomyces naeslundii str.
Howell 279]
Length = 364
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 131/340 (38%), Gaps = 76/340 (22%)
Query: 442 LPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVD 501
+P VD + GGPPCQG S + R+ ED +NR + VI+ +PKY ++ENV
Sbjct: 68 IPAGVDVVVGGPPCQGFSTLGK-RD----AEDARNRLWEQYAQVIQRARPKYFVVENVPA 122
Query: 502 ILKFSG--GFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
K FLA G + DY ++ A YG PQ R R L G R +P +P
Sbjct: 123 FGKSPQYRDFLAATRPGEFLE-DYSFDFRVLNAADYGAPQARRRAVLIGHRYDMAVPGFP 181
Query: 560 LPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGT 619
PTH G +P P + + LL V DER
Sbjct: 182 EPTHSPDGGGDLP--------------PYRTVRQTLLG--------VPAQPDMDER---- 215
Query: 620 VARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFR 679
+ +LR V A P L+ R + ++ ER IP +G N
Sbjct: 216 --------FDQLRTR--VGSRRVPGAFSPRELHVSRGY--SDISLERFAKIP--EGGNRA 261
Query: 680 DLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQS-STKPFGRLWWDEIVNTV 738
+LP L P W H S S GRL WD T+
Sbjct: 262 NLPDNLKAPC----W----------------------LRHTSGSMDVMGRLHWDRPSVTI 295
Query: 739 VTR-AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
T +P LHP ++R +T E A LQGFPD ++ G
Sbjct: 296 RTEFFKPEKGRYLHPVENRAITHYEAALLQGFPDTHRFIG 335
>gi|420466783|ref|ZP_14965540.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-9]
gi|393085181|gb|EJB85869.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-9]
Length = 351
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKRFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|309790027|ref|ZP_07684601.1| C-5 cytosine-specific DNA methylase [Oscillochloris trichoides
DG-6]
gi|308227882|gb|EFO81536.1| C-5 cytosine-specific DNA methylase [Oscillochloris trichoides DG6]
Length = 438
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 136/343 (39%), Gaps = 77/343 (22%)
Query: 446 VDFICGGPPCQGVS--GFNRFRNPQ--AALEDIKNRQLLVFMDVIEYLKPKYVLMENVVD 501
VD I GGPPCQG + G + R+ + + E++ N FM +E L+P +MENV D
Sbjct: 125 VDVIIGGPPCQGFARIGKGKIRSIELESHYEEVLNSLYKEFMRFVEILQPLAFVMENVPD 184
Query: 502 ILKFSGG-FLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPL 560
+ ++ G L R R Y I+ A YG+PQ R R+F+ G R + + +
Sbjct: 185 MARYQNGEVLNRI---RNKCTKYTIEWRILNAVDYGVPQRRQRLFIQGNRLGQNIRWPKI 241
Query: 561 PTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYG-T 619
T N F V + DAISDLP T E+ Y
Sbjct: 242 ET---------TNRF------------------VTVRDAISDLPNRTPPSLEEILPYQPQ 274
Query: 620 VARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFR 679
+ TE+QK +R H+ ++ H QV DD ++ R+G +R
Sbjct: 275 HSLTEYQKKMREGLHE----------DHKDKIFAHIIRQVREDD--KLIFSILREGQKYR 322
Query: 680 DLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVV 739
D+P L ++ + RL +D+ TV
Sbjct: 323 DIPTEL-----------------------------QRYRTDIFDDKYWRLIYDQPSWTVT 353
Query: 740 TRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+ +HP R L+IRE ARLQ FPD + GP ER
Sbjct: 354 AHIRKDAYRYIHPEYSRTLSIREFARLQSFPDRFLFAGPRTER 396
>gi|420488940|ref|ZP_14987537.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-11]
gi|393107690|gb|EJC08230.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-11]
Length = 351
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 129/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L G + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGIHKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|340620812|ref|YP_004739263.1| MHphi(C) [Capnocytophaga canimorsus Cc5]
gi|339901077|gb|AEK22156.1| MHphi(C) [Capnocytophaga canimorsus Cc5]
Length = 358
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 139/340 (40%), Gaps = 88/340 (25%)
Query: 446 VDFICGGPPCQGVSGFN-RFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
V I GGPPCQG S N R RN +++ KN L F+ + LKP + ++ENV +
Sbjct: 68 VFIIMGGPPCQGFSLSNTRTRN----MQNEKNFLFLEFVRFVRELKPTWFVLENVWGLTN 123
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
G ++ Y+ ++ A YG+PQ R R F+ G R K ++P P
Sbjct: 124 IEEGKAKSMIEDCFRALGYEVNSQVLWASDYGVPQNRNRFFMVGNRHGIKF-EFPEP--- 179
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKY---GTVA 621
+K + + +AI DLP + N E ++ KY +VA
Sbjct: 180 -------------------------FDKKITVEEAIGDLPDLENGEMLEKGKYKVPSSVA 214
Query: 622 RTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDY--ERVCCIPKRKGANFR 679
+E+ + +R H Y + F N+D +R I ++G N+R
Sbjct: 215 -SEYAQLMREHSH-----------------YPTQNFVSRNNDLVIQRYKYI--KQGQNWR 254
Query: 680 DLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVV 739
+P L+ +YA K S + RL D+ V
Sbjct: 255 AIP------------------------DELMQNYADKGRTHSGI--YKRLIADQ---PSV 285
Query: 740 TRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
+ +L+HP QDR L++RE ARLQ FPD + GP+
Sbjct: 286 VISNYRKSMLIHPYQDRGLSVREAARLQSFPDDFYFEGPI 325
>gi|422323789|ref|ZP_16404828.1| hypothetical protein HMPREF0005_01193 [Achromobacter xylosoxidans
C54]
gi|317401187|gb|EFV81833.1| hypothetical protein HMPREF0005_01193 [Achromobacter xylosoxidans
C54]
Length = 571
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 138/341 (40%), Gaps = 70/341 (20%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAA---LEDIKNRQLLVFMDVIEYLKPKYVLMENVVDI 502
++ I GGPPCQG S + D + F+ ++Y +P +MENV I
Sbjct: 111 INVIVGGPPCQGFSKARMVDGSNHGGRLVHDARRDLYQEFLRFVKYYQPSVFVMENVPGI 170
Query: 503 LKFSGG-FLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLP 561
+GG F R V + Y+ + A +G+PQ R+R + G R ++LP +
Sbjct: 171 KSAAGGEFFTRLQV-ESRELGYRVIPYEVEAWRFGVPQKRIRQLIIGTR--RELPLF--- 224
Query: 562 THEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVA 621
IP+ + QP V L +AI DLP + + ER Y +
Sbjct: 225 ---------IPDRYIRPTHGGEGLQPL-----VSLGEAIGDLPEICAGDERHERLYDSAL 270
Query: 622 R-TEFQKYIRLRRHDVVNLSSAQM----ASRPSLLYDHRPFQVNNDDYERVCCIPKRKGA 676
R QKY +DV+ A++ ++RP L D R D+ R+ R+G
Sbjct: 271 RQAHIQKYGTRYIYDVLQADKAKILTAHSARPHSLRDMR-------DFARL-----REGE 318
Query: 677 NFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKF--EHQSSTKPFGRLWWDEI 734
N S L M+F + ++ + R D++
Sbjct: 319 N---------------------------SKHALARGVEMEFPYDRENFKDRYTRQHRDQL 351
Query: 735 VNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
+T+V + + +HP+Q R LT RE AR+Q FPD + L
Sbjct: 352 CSTIVAHLKKDGLMFIHPTQMRSLTPREAARVQSFPDTFSL 392
>gi|159477138|ref|XP_001696668.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
gi|158282893|gb|EDP08645.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1263
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 38/206 (18%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
G+V+ + GGPPCQG SG NR + A+ + N + ++ ++ +P+Y ++ENV+
Sbjct: 810 GEVELLVGGPPCQGFSGLNRHAGSEKAVRN--NSLVGSYLSYCDFYRPRYFILENVMGFT 867
Query: 504 KF----------------------SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFR 541
+ + A+ L+ M YQ R G + AG+YG+PQ R
Sbjct: 868 FYKPVQPTEGSHKSRQRRRRSKSSPSVSYFKLALRTLLDMGYQVRFGALNAGNYGVPQSR 927
Query: 542 LRVFLWGARPFKKLPQYPLPTHE--IVARGVIPNEFQE----IIVA----YANNQPCQLE 591
R+F+ A P + LP +P P H + A E Q+ I V YAN L
Sbjct: 928 KRMFIIAALPEEVLPNWPRPMHSFRVAAEAGSNREGQQDQPPIPVPGGMYYANGAGKCLA 987
Query: 592 ----KGVLLSDAISDLPLVTNNESED 613
+ V + DAI +LP +T D
Sbjct: 988 GTPLRAVTVRDAIGNLPPITPGTKGD 1013
>gi|440636281|gb|ELR06200.1| hypothetical protein GMDG_07855 [Geomyces destructans 20631-21]
Length = 1529
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 155/359 (43%), Gaps = 66/359 (18%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FMDVIEYLKPKYVLMEN 498
+PLPGD+DFI G PC G S N ++ + + +KN+ L+ +I++ +PKY L+EN
Sbjct: 800 IPLPGDIDFIAAGSPCVGYSILNPNKD---SAQGLKNQSLIADVASMIDFYRPKYALLEN 856
Query: 499 VVDILKFSGG----FLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKK 554
V+ + + G L++ + +V M YQ ++ ++ A S+G PQ R R+F+ A P K
Sbjct: 857 VLTMAQKGKGRNHDSLSQL-ICCIVGMGYQLQVYVLDAWSFGSPQGRSRLFVSVAAPGFK 915
Query: 555 LPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
LP P +H PN + + N E+ + E
Sbjct: 916 LPPRPDCSHS------HPNGTSDRGLGTMANGKAFGERLFV------------------E 951
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDY-ERVCCIP-K 672
+ V+ E +++ D+ + + P DHRP + D + + IP
Sbjct: 952 TPFKFVSAAEATEHLP----DIGDGHPGHCSQYP----DHRPSRSPRDTLRQHMNIIPFS 1003
Query: 673 RKGANF------RDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPF 726
G NF R + G+ + D + K GK AM+F ++ +
Sbjct: 1004 PPGMNFIKTWKNRHITGM-------TKHDYENFNTVTKKGKQR--HNAMEF-----SRAY 1049
Query: 727 GRLWWDEIVNTVVTRAQPHNR---ILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
GR+ + +T+VT P N +LH SQ R+LTI E QGF L G E+
Sbjct: 1050 GRIVPTSLFSTIVTNCSPENARSGRVLHWSQPRLLTIEEAKIAQGFVQGDALTGTRGEQ 1108
>gi|420430157|ref|ZP_14929187.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-20]
gi|393048776|gb|EJB49743.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-20]
Length = 351
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 130/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFIFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L G + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGVLKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNI 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ +G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYGSASAK 322
>gi|420475342|ref|ZP_14974013.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-21]
gi|393093449|gb|EJB94066.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-21]
Length = 352
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 130/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFIFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L G + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGVLKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ +G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYGSASAK 322
>gi|342210471|ref|ZP_08703237.1| cytosine specific DNA methyltransferase [Mycoplasma anatis 1340]
gi|341579492|gb|EGS29506.1| cytosine specific DNA methyltransferase [Mycoplasma anatis 1340]
Length = 600
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 129/334 (38%), Gaps = 82/334 (24%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
++ I GGP CQG S + L D +N ++++++++KPK ++ENV ++
Sbjct: 75 INMIVGGPSCQGFSN----KGKMLGLNDPRNYLFKEYVEIVKHVKPKLFILENVKGMISS 130
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
G+ V + Y+ ++ A +G+PQ R R L G+ F
Sbjct: 131 ENGYFINEIVKSFEELGYKISYKVLNAADFGVPQNRERTILIGSLDFH------------ 178
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
I +EF+ K + +AISDL + + E E+ Y + +
Sbjct: 179 -FNFRILDEFK--------------TKTPTVYEAISDLSYLNSGEGEEISDYINEPVSYY 223
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSL-LYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
QK +R + SL LY+H+ + ++ IP KG F LP
Sbjct: 224 QKLMR----------------KNSLKLYNHKATNHSKHALYKLSLIPPEKGKEF--LPKE 265
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-Q 743
L+G Q + RL W+E T+ TR
Sbjct: 266 LLG-------------------------------KQKFKTTWTRLEWNEPSPTIDTRFDT 294
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP +R +T RE ARLQ FPD + G
Sbjct: 295 PSNGKNTHPILNRAITPREAARLQSFPDDFIFTG 328
>gi|406599807|ref|YP_006745153.1| DNA (cytosine-5-)-methyltransferase family protein [Leuconostoc
gelidum JB7]
gi|406371342|gb|AFS40267.1| DNA (cytosine-5-)-methyltransferase family protein [Leuconostoc
gelidum JB7]
Length = 420
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 144/350 (41%), Gaps = 80/350 (22%)
Query: 440 LPLPGD-VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMEN 498
L + GD + + GGPPCQ S R +N D + ++ +++ P++ + EN
Sbjct: 102 LSINGDRISGVIGGPPCQAYSTIGRAQNAPKKANDERIYLYRYYIQFLQHYHPEFFVFEN 161
Query: 499 VVDILKFS---GGFLARYAVGRLV--------SMDYQTRLGIMAAGSYGLPQFRLRVFLW 547
V +L F G +L + G L + Y+ I+ YG+PQ R R+ ++
Sbjct: 162 VKGLLSFKDVDGNYLLKRQNGVLTGRMYEDFRAAGYELDYRIVNTSEYGVPQARERIIIF 221
Query: 548 GARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVT 607
G P E EII ++ + E V L +A+SDLP +
Sbjct: 222 GT----------------------PKEKSEIIQSFFSELEKLKEAPVTLKEALSDLPSLK 259
Query: 608 NNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERV 667
+ ++ KY + ++Y R+ D + L+ Q +RP++ D + +Q +
Sbjct: 260 S--GQEVNKYASSPSQYTRRY--FRKDDKLPLT--QNLARPNIERDLKIYQ--------L 305
Query: 668 CCIPKRKGANFR--DLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKP 725
K KG N R +LP L N D ++R
Sbjct: 306 VLQSKIKGHNMRYNELPKNLRTHKN---VDKFLDR------------------------- 337
Query: 726 FGRLWWDEIVNTVVTRAQPHNRILLHP--SQDRVLTIRENARLQGFPDCY 773
+ L WD+ +T+V +HP +Q+R +T+RE AR+QGFPD +
Sbjct: 338 YKALSWDKPSHTIVAHIAKDGHHYIHPDVNQNRSITVREAARIQGFPDDF 387
>gi|420440236|ref|ZP_14939193.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-30]
gi|393056884|gb|EJB57793.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-30]
Length = 351
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 129/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNTLDYGVPQIRERVILVGALKSFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|420482042|ref|ZP_14980679.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-2]
gi|420512466|ref|ZP_15010949.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-2b]
gi|393099276|gb|EJB99857.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-2]
gi|393157529|gb|EJC57790.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-2b]
Length = 351
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 129/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L G + FK+ +P P
Sbjct: 121 QKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGVLKRFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|188527268|ref|YP_001909955.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi470]
gi|188143508|gb|ACD47925.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Shi470]
Length = 348
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 131/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L G + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERGYVLEHAILNALDYGVPQIRERVILVGVLKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ + K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQMLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
+ + KSG T + ++WW++ T+ +
Sbjct: 253 --------------KNLRPKSG---------------YTNTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L++RE ARLQ FPD Y+ G +
Sbjct: 284 PSSSRCIHPRDSRALSVREGARLQSFPDNYKFCGSTSAK 322
>gi|108763142|ref|YP_631786.1| DNA-cytosine methyltransferase [Myxococcus xanthus DK 1622]
gi|108467022|gb|ABF92207.1| DNA-cytosine methyltransferase [Myxococcus xanthus DK 1622]
Length = 505
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 163/390 (41%), Gaps = 92/390 (23%)
Query: 446 VDFICGGPPCQGVSGFNR------FRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
VD I GGPPC + R F++P+A +D + + ++ ++ LKP ++MENV
Sbjct: 97 VDVIVGGPPCPAFTRVGRAKLREVFQHPEAFKQDPRATLYVQYLQYVQALKPLALVMENV 156
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQY 558
DIL + G L L +MDY+ ++ A SY +PQ R R FL + + P +
Sbjct: 157 PDILNWGGHNLGDEICESLKAMDYRCAYTLLNAASYDVPQMRERFFLVAVHKETRSDPSF 216
Query: 559 PLPTHEI-VARGVIPNEFQEIIVAYANNQPCQLEKG----------------VLLSDAIS 601
P+PT ++ RG + VA N +KG V +++A++
Sbjct: 217 PVPTRKVDFPRGYSSSR----NVALKNVLAQSSDKGSWYVAPPAAPANAPPAVTVAEALA 272
Query: 602 DLPLVTNNESEDERK----------YGTVARTEFQKYIR----------LRRHDVVNLSS 641
DLP +T++ +R+ + T + F + +R LR H L+
Sbjct: 273 DLPELTDHLHNRDRRGARHLNGRVPHTTAPHSAFARLMREWPGFESDGFLRDHVTRCLTK 332
Query: 642 AQMASRPSLLYDHRPFQVN--NDDYERVCC---------IPKRKGANFRDLPGVLVGPDN 690
D+R F+ +DY + + KR+ + R G
Sbjct: 333 ----------RDYRLFEAMEPGEDYPKAHVRATQFFAQELEKRRRSGARLTEG------- 375
Query: 691 KVRWDPSMERVMLKSGKPLVPDY-AMKFEHQSSTKPFGRLWWDEIVNTVVTR--AQPHNR 747
S+E LK+ VP Y KF ++ + ++ DE T++ ++
Sbjct: 376 ------SLEYEELKAA--FVPPYNPGKFPNK-----WRKMAADEPARTLMAHLGKDTYSH 422
Query: 748 ILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
I Q RV+++RE ARLQ FPD ++ G
Sbjct: 423 IHYDSGQQRVISVREAARLQSFPDGFRFAG 452
>gi|420539629|ref|ZP_15037948.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M5]
gi|393147314|gb|EJC47639.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M5]
Length = 338
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 128/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 54 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFIFENVVGLMSM 107
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG PQ R RV L G + FK+ +P P
Sbjct: 108 QKGQLFQRICNAFKERGYILEHAILNALDYGAPQVRERVILVGTLKSFKQKFHFPKP--- 164
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 165 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 199
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 200 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 239
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 240 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 270
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 271 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 304
>gi|419418098|ref|ZP_13958451.1| type II DNA modification enzyme [Helicobacter pylori NCTC 11637 =
CCUG 17874]
gi|384374751|gb|EIE30122.1| type II DNA modification enzyme [Helicobacter pylori NCTC 11637 =
CCUG 17874]
Length = 348
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 130/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKRFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGSASAK 322
>gi|242212987|ref|XP_002472324.1| predicted protein [Postia placenta Mad-698-R]
gi|220728601|gb|EED82492.1| predicted protein [Postia placenta Mad-698-R]
Length = 1147
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 129/304 (42%), Gaps = 59/304 (19%)
Query: 510 LARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARG 569
+ ++ + LV + YQ ++ AG YG Q R RV WGA+ LP++P P H++ R
Sbjct: 807 VVKFIIRALVCLGYQVHFKVVDAGHYGAAQSRRRVIFWGAKQGVPLPKFPKPMHDLTKRS 866
Query: 570 V----IPNEFQEIIVAYA--------NNQPCQLEKGVLLSDAISDLPLVTNNESEDERKY 617
+P V ++ +N C V ++DAI+DLP +E +
Sbjct: 867 FHSFKLPTGEVLKPVTWSIRHKESGQSNHQCVPLLPVTVNDAIADLPSFDWVNPFNEIRP 926
Query: 618 GTVARTEFQKYIR--LRRHDVVNLSSAQMASRPSLL-YDHRPF-------------QVNN 661
G E + +RR D V ++A + Y H P +V +
Sbjct: 927 GPKDLDEIGLRLAKGIRRFDAVPSLEPRLAGFTDPVPYAHPPMSRYQLWIRQGAGAEVTH 986
Query: 662 D--------DYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDY 713
ERV +P AN LP L + R+ SG D
Sbjct: 987 HYTRLFPARIVERVVRVPLTPNANHEGLPAKL-----------RVGRLFESSG-----DA 1030
Query: 714 AMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPD 771
+++ + +GR+ D+I T +T P++++ +LHP+Q R+LT+RE AR QGFPD
Sbjct: 1031 RKRYD-----RVYGRIDGDQIFQTALTTVAPNSKVGRVLHPNQKRILTVRECARAQGFPD 1085
Query: 772 CYQL 775
Y+
Sbjct: 1086 KYEF 1089
>gi|420468527|ref|ZP_14967269.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-10]
gi|393088208|gb|EJB88860.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-10]
Length = 352
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 130/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFIFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L G + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGVLKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNI 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ +G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYGSASAK 322
>gi|319639604|ref|ZP_07994351.1| cytosine-specific methyltransferase [Neisseria mucosa C102]
gi|317399175|gb|EFV79849.1| cytosine-specific methyltransferase [Neisseria mucosa C102]
Length = 348
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 128/333 (38%), Gaps = 90/333 (27%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D I GGPPCQG S + ++D +N+ F+D + + +PK LMENV +I+
Sbjct: 76 LDVIIGGPPCQGFSIAGK-----RMIDDERNQLYKAFVDFVRFYQPKAFLMENVPNIMSM 130
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
G + + + Y + I+ A YG+PQ R R F G FK + P +
Sbjct: 131 GKGAIKQQITQDFEQLGYIVKSQILMASDYGVPQNRKRAFFVG---FKNGTIFEFPKQTV 187
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
N++ V + AISDLP + +D Y + +E+
Sbjct: 188 -------NQY------------------VTVKQAISDLP---DYSVDDGAAYPLLGSSEY 219
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
Q +R + L++H+ Q N+ E + +P G N++ LP L
Sbjct: 220 QHMMR---------------QNSTGLFNHQITQHNDKTKEIIALVP--DGGNYKSLPEHL 262
Query: 686 VGPDN-KVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQP 744
N + W L S KP T+ T
Sbjct: 263 RQTRNVNIAW------TRLNSQKPSF--------------------------TIDTGHNH 290
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
H H +RV T+RE+AR+Q FPD + G
Sbjct: 291 H----FHYQFNRVPTVRESARIQSFPDDFIFLG 319
>gi|420410013|ref|ZP_14909156.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4200]
gi|393028326|gb|EJB29412.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4200]
Length = 351
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 130/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L G + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGVLKSFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ +G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYGSASAK 322
>gi|420433643|ref|ZP_14932651.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-24]
gi|420507397|ref|ZP_15005910.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-24b]
gi|420509085|ref|ZP_15007587.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-24c]
gi|420532834|ref|ZP_15031197.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M1]
gi|420534397|ref|ZP_15032748.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M2]
gi|420536203|ref|ZP_15034545.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M3]
gi|420537907|ref|ZP_15036237.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M4]
gi|420541394|ref|ZP_15039702.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M6]
gi|420542914|ref|ZP_15041209.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M9]
gi|393051171|gb|EJB52124.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-24]
gi|393119478|gb|EJC19969.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-24b]
gi|393120511|gb|EJC21000.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-24c]
gi|393140465|gb|EJC40838.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M1]
gi|393142620|gb|EJC42974.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M2]
gi|393143851|gb|EJC44195.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M3]
gi|393145462|gb|EJC45793.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M4]
gi|393148014|gb|EJC48338.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M6]
gi|393159977|gb|EJC60226.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M9]
Length = 351
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 129/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFIFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG PQ R RV L G + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGAPQVRERVILVGTLKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ +G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYGSASAK 322
>gi|320588321|gb|EFX00790.1| DNA methyltransferase dim-2 [Grosmannia clavigera kw1407]
Length = 1168
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 410 SEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQA 469
+ D EP G + ++L +G S +P PG+VD I GG PCQG F+ + +A
Sbjct: 697 TADAVEPFLGSA---DELLARALQGRYSRAVPAPGEVDLISGGSPCQG---FSVLTSDKA 750
Query: 470 ALEDIKNRQLLV-FMDVIEYLKPKYVLMENVVDILKFSGGFLARYA-------------- 514
A + KNR ++ F +++ +P Y ++ENV F+AR
Sbjct: 751 APKQYKNRSMVASFASMVDLYRPLYGVLENV-------PAFVARQPRQQDKNHREDIFGQ 803
Query: 515 -VGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPN 573
+ LV + YQ + + A +YG PQ R RVFL A P +LP +PLP+H P+
Sbjct: 804 LLCALVGLGYQVAVHLGNAWAYGAPQSRQRVFLLFAAPAVRLPVFPLPSHG------SPS 857
Query: 574 EFQEII-VAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVA 621
+F V N C E D + P V+ + + + G A
Sbjct: 858 DFHATTAVGGLANGDCIAEAW----DGPTAFPFVSIGRATADLQIGPAA 902
>gi|385229774|ref|YP_005789690.1| type II DNA modification methyltransferase [Helicobacter pylori
Puno135]
gi|344336212|gb|AEN18173.1| type II DNA modification methyltransferase [Helicobacter pylori
Puno135]
Length = 351
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 130/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKRFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGSASAK 322
>gi|386745963|ref|YP_006219180.1| type II DNA modification (methyltransferase) [Helicobacter pylori
HUP-B14]
gi|384552212|gb|AFI07160.1| type II DNA modification (methyltransferase) [Helicobacter pylori
HUP-B14]
Length = 351
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 130/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + F++ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQMRERVILVGALKSFEQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG 317
>gi|400598697|gb|EJP66406.1| DNA methyltransferase Dim-2 [Beauveria bassiana ARSEF 2860]
Length = 1142
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 149/362 (41%), Gaps = 45/362 (12%)
Query: 425 EKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FM 483
+ + +G ++ +P G+VDFI GG PC GF++ N + KN+ L+ F
Sbjct: 738 DDFQRLAFQGRFADNIPQVGEVDFISGGSPC---PGFSQLTNDKETDAQRKNQSLVAAFA 794
Query: 484 DVIEYLKPKYVLMENVVDILKFS---GGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQF 540
++ +PKY ++ENV I++ G + + LV M YQ RL ++ A S G Q
Sbjct: 795 SCVDLYRPKYGILENVAGIIQKHQNRGHDVFSQLMCALVGMGYQARLVLLDALSCGSAQV 854
Query: 541 RLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAI 600
R RVF+ A P LP+ P+ TH PN + +P + +
Sbjct: 855 RSRVFIIFAAPGWTLPEAPIQTHSHQ-----PNVKNFKLGRLPTGEP------MARREVA 903
Query: 601 SDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVN 660
S P + S+ ++ I H VV+ ++ L P+ +N
Sbjct: 904 SCTPFSYKSASQAAAGLPSLYDATPDICIAFPDHRVVSHTNTNTMRNRIRLIPKAPYGMN 963
Query: 661 NDD--YERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFE 718
Y R+ P+ G GVL ER M L + M
Sbjct: 964 FSQAWYGRLGTRPRVAGR------GVLT----------RSERNMFS----LRGEATMSTS 1003
Query: 719 HQSSTKPFGRLWWDEIVNTVVTRAQPHNRI---LLHPSQDRVLTIRENARLQGFPDCYQL 775
QS + +GR ++ + T+VTRA P + +H S+DR L++ E R QGF D L
Sbjct: 1004 IQS--RAYGRQPPNQPMATIVTRASPRDAKQGRTIHWSEDRCLSVMEAKRGQGFLDEELL 1061
Query: 776 FG 777
G
Sbjct: 1062 LG 1063
>gi|421721497|ref|ZP_16160772.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R055a]
gi|407224832|gb|EKE94607.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R055a]
Length = 351
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 130/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVSLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKRFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGSASAK 322
>gi|420487096|ref|ZP_14985704.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|420520981|ref|ZP_15019412.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-8b]
gi|393104649|gb|EJC05206.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|393127568|gb|EJC28013.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-8b]
Length = 351
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 129/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L G + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGVLKSFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ +G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYRFYG 317
>gi|385220298|ref|YP_005781770.1| type II DNA modification [Helicobacter pylori India7]
gi|317009105|gb|ADU79685.1| type II DNA modification [Helicobacter pylori India7]
Length = 348
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 129/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L G + FK+ +P P
Sbjct: 121 QKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGVLKSFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G N DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQNKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGSASAK 322
>gi|385249008|ref|YP_005777227.1| Type II DNA modification enzyme [Helicobacter pylori F57]
gi|317181803|dbj|BAJ59587.1| Type II DNA modification enzyme [Helicobacter pylori F57]
Length = 351
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 130/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L G + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGVLKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
+ + KSG T + ++WW++ T+ +
Sbjct: 253 --------------KNLRPKSG---------------YTNTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGSASAK 322
>gi|420449975|ref|ZP_14948841.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
gi|393069292|gb|EJB70090.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
Length = 348
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 130/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKRFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGSASAK 322
>gi|257069715|ref|YP_003155970.1| DNA-methyltransferase Dcm [Brachybacterium faecium DSM 4810]
gi|256560533|gb|ACU86380.1| DNA-methyltransferase Dcm [Brachybacterium faecium DSM 4810]
Length = 431
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 148/357 (41%), Gaps = 103/357 (28%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
++ + GGPPCQG+S R A++D +N L F+ ++ LKP+Y +MENV ++
Sbjct: 77 EIHLVAGGPPCQGISMIGR-----RAIDDPRNALLKEFVRLVLELKPRYFVMENVAGLMV 131
Query: 505 FSGGFLARYAVGRLVSM-----DYQ--TRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
R V +V M +Y+ T + ++ A +G PQ R RV + G+R LP+
Sbjct: 132 GK----HRQLVDEVVEMVEADDEYRVVTPIKVLQAADFGTPQSRKRVIVMGSRKDVTLPE 187
Query: 558 YPLPTHEIVARGVIPNEFQEIIVAYANNQPCQ--LEKGVLLSDAISDLPLVTNNESEDER 615
YP TH P + QP + L G + DAI DLP + + DE
Sbjct: 188 YPSVTHA-------PRTIK-------GGQPSKGTLPTGPSVFDAIGDLP---DPDQFDEL 230
Query: 616 KY-GTVARTEFQK------YIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVC 668
+ +V+R E+ K Y+R + D + SRP RP V+
Sbjct: 231 LHDDSVSRVEYGKPSTYAAYLRGMKQD------PEDYSRP------RPQLVDG------- 271
Query: 669 CIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGR 728
L V S++R K+ P + +F R
Sbjct: 272 ----------------LTSSARTVHTKKSIDR--FKAADPGTTEKVSRFL---------R 304
Query: 729 LWWDEIVNTV----------VTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
L D I NT+ T +P +HP+ RV+T+RE ARL G+PD ++
Sbjct: 305 LHPDGICNTLRAGTASDRGAYTAPRP-----IHPALPRVITVREAARLHGYPDWFRF 356
>gi|384895833|ref|YP_005769822.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A]
gi|315586449|gb|ADU40830.1| possible DNA (cytosine-5-)-methyltransferase [Helicobacter pylori
35A]
Length = 351
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 129/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L G + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGVLKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
+ + KSG T + ++WW++ T+ +
Sbjct: 253 --------------KNLRPKSG---------------YTNTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|432343044|ref|ZP_19592255.1| DNA-cytosine methyltransferase [Rhodococcus wratislaviensis IFP
2016]
gi|430771931|gb|ELB87748.1| DNA-cytosine methyltransferase [Rhodococcus wratislaviensis IFP
2016]
Length = 350
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 132/342 (38%), Gaps = 94/342 (27%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
D D I GGPPCQG S R R+ ++ + N ++ + +KPK ++ENV + +
Sbjct: 65 DADVILGGPPCQGFSPLGRDRDDESRAQ--LNELWQHYLRAVRQVKPKAFVIENVPEFQR 122
Query: 505 FSGGFLARYAVGRLVSM--------DYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP 556
A++A RL+ + Y+ G++ A YG+PQ R R R KK+P
Sbjct: 123 -----SAQFA--RLLELMETDRELKKYRFAYGVLNAADYGVPQRRRRGIFMAVRGRKKVP 175
Query: 557 QYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERK 616
P PTH V E+ V + DAI D+PL T
Sbjct: 176 WPPAPTHG--PDSVSATEY------------------VTVHDAIGDIPLAT--------- 206
Query: 617 YGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGA 676
ARTE + VV+ R + RP + R IP +G
Sbjct: 207 ----ARTEVE---------VVDGQQDLHIGR-----NARPMSL-----ARYQAIP--EGG 241
Query: 677 NFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVN 736
N R L +P + + +T GRLWWD
Sbjct: 242 N----------------------RFDLARNRPDLLPKCWANKPTGTTDVMGRLWWDRPSV 279
Query: 737 TVVTR-AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
T+ T +P LHP DR +T RE ARLQ FPD ++ G
Sbjct: 280 TIRTEFYKPEKGRYLHPVADRPITHREAARLQSFPDDFEFEG 321
>gi|385228214|ref|YP_005788147.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Puno120]
gi|344334652|gb|AEN15096.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Puno120]
Length = 351
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 129/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
+ + KSG + ++WW++ T+ +
Sbjct: 253 --------------KNLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|384894068|ref|YP_005768117.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Sat464]
gi|308063322|gb|ADO05209.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Sat464]
Length = 348
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 130/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L G + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERGYVLEHAILNALDYGVPQIRERVILVGVLKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
+ + KSG T + ++WW++ T+ +
Sbjct: 253 --------------KNLRPKSG---------------YTNTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L++RE ARLQ FPD Y+ G +
Sbjct: 284 PSSSRCIHPRDSRALSVREGARLQSFPDNYKFCGSTSAK 322
>gi|357410515|ref|YP_004922251.1| DNA-cytosine methyltransferase [Streptomyces flavogriseus ATCC
33331]
gi|320007884|gb|ADW02734.1| DNA-cytosine methyltransferase [Streptomyces flavogriseus ATCC
33331]
Length = 660
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 141/349 (40%), Gaps = 86/349 (24%)
Query: 443 PGDVDFICGGPPCQGVSGFNRF----------RNPQAALEDIKNRQLLVFMDVIEYLKPK 492
P +D + GGPPCQ S R R+PQ D + ++DV++ L+P+
Sbjct: 107 PAKIDLVAGGPPCQPFSRAGRSKIRSLVEHHGRDPQ----DRRKELWSAYLDVVKRLRPR 162
Query: 493 YVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPF 552
VLMENV D+ F+ R +L ++ Y T++ ++ A YG+PQ R R+ L
Sbjct: 163 AVLMENVPDMGLGDDFFVVRTIEEQLENLGYATQVRLVDAWKYGVPQHRKRLIL------ 216
Query: 553 KKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL--VTNNE 610
+AR N+ + ++ Q + E+ L DAI DLP+ V E
Sbjct: 217 -------------LAR----NDVER----FSWRQELEQEQRTTLRDAIGDLPVLPVVPTE 255
Query: 611 SEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCI 670
+R+ +E + + R +R ++DH +V DD E
Sbjct: 256 RVGQRELPYDEPSELSGFGKDMRK----------WARKDRVWDHMTRRVRKDDAEIFS-- 303
Query: 671 PKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLW 730
SM+ L S + P+ +++ T + +L
Sbjct: 304 --------------------------SMDSKTLYS--QITPEL-QRYKADHFTDKYKKLD 334
Query: 731 WDEIVNTVVTRAQPHNRILLHPSQD--RVLTIRENARLQGFPDCYQLFG 777
W ++ ++ +HP QD R LT+RE AR+Q FPD ++ G
Sbjct: 335 WADLSRSITAHIAKDGYWYIHPDQDQPRTLTVREAARVQTFPDRFRFAG 383
>gi|408826936|ref|ZP_11211826.1| site-specific DNA methylase [Streptomyces somaliensis DSM 40738]
Length = 335
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 132/338 (39%), Gaps = 86/338 (25%)
Query: 442 LPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVD 501
+P ++I GGPPCQG S + RN +D +NR F+ ++ +LKP ++ENV+
Sbjct: 52 IPQRPNWIVGGPPCQGYSTVGK-RN----RDDQRNRLFEHFLRIVGHLKPDGFVIENVLG 106
Query: 502 ILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLP 561
+ S + + YQ R + +A +G+PQ R RV G R
Sbjct: 107 LKDMS---YEQEVADAFKQLGYQVRFQVASAADHGVPQLRRRVLFVGHR----------- 152
Query: 562 THEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVA 621
E +G+ P Q ++ V + AI DLP + ++ Y A
Sbjct: 153 --EAEFKGLDPL--------------LQADQYVSVEQAIGDLPALQPGQTAT--TYDRKA 194
Query: 622 RTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDL 681
++FQK +R + S+++ H P V E + IP G N +
Sbjct: 195 ESQFQKLMRGGSTTLQGHSASK----------HPPHLV-----EAISHIP--DGGNRTSI 237
Query: 682 PGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLW-WDEIVNTVVT 740
P + + KSG H S + RL W V
Sbjct: 238 P----------------DHLQPKSGF-----------HNS----YSRLASWLPAVAITQN 266
Query: 741 RAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGP 778
+P +HP QDR LT RE ARLQ FPD + GP
Sbjct: 267 MGKPSGTRCIHPKQDRGLTTREGARLQSFPDSFCFTGP 304
>gi|386858204|ref|YP_006262903.1| methyltransferase protein [Deinococcus gobiensis I-0]
gi|380002924|gb|AFD28110.1| methyltransferase protein [Deinococcus gobiensis I-0]
Length = 536
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 27/201 (13%)
Query: 441 PLPGDVDFICGGPPCQGVSGFNR------FRNPQAALEDIKNRQLLVFMDVIEYLKPKYV 494
P+ +D I GGPPCQ + R +P+A +D ++R + ++ +E +P +
Sbjct: 122 PVAEGIDVIVGGPPCQAFARVGRSKLREILEHPEAYRQDPRSRLYMEYLKYVEAFQPVAL 181
Query: 495 LMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKK 554
LMENV D+L G +A L + Y R ++ A YG+PQ R R+FL R ++
Sbjct: 182 LMENVPDVLNHGGQNIAEETAEFLEDLGYVARYTLLNAAYYGVPQMRERMFLVAYR--QE 239
Query: 555 LPQ---YPLPTH----------------EIVARGVIPNEFQEIIVAYANNQPCQLEKGVL 595
L Q +PLPTH + + RG + E + + L V
Sbjct: 240 LGQEVSFPLPTHWLRLPPGYEGSRQVALKFLKRGGLFEEAPQFRYVHPPEATPDLTPAVT 299
Query: 596 LSDAISDLPLVTNNESEDERK 616
+A+SDLP +T + RK
Sbjct: 300 AREALSDLPTITAHLEGRSRK 320
>gi|358385860|gb|EHK23456.1| hypothetical protein TRIVIDRAFT_349, partial [Trichoderma virens
Gv29-8]
Length = 1029
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 155/371 (41%), Gaps = 52/371 (14%)
Query: 425 EKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FM 483
+ L+ F +G ++ +P GDVDF+ GG PC GF+ N + KN+ L+ F
Sbjct: 669 DDLQHFAIRGQFADNVPRIGDVDFVSGGSPC---PGFSILTNDKTTAAQRKNQSLVAAFA 725
Query: 484 DVIEYLKPKYVLMENVVDILKFSGGF---LARYAVGRLVSMDYQTRLGIMAAGSYGLPQF 540
++ +PKY ++ENV ++ + + LV + YQT+ + A S G PQ
Sbjct: 726 SFVDLYRPKYGVLENVPGMIHKKESRDQDVFSQLICSLVGLGYQTQFFFLDASSCGSPQR 785
Query: 541 RLRVFLWGARPFKKLPQYPLPTHEI------VARGVIPNEFQEIIVAYANNQPCQLEKGV 594
R R+F+ A P +LP+ P+ TH + G +PN P K +
Sbjct: 786 RSRIFVIFAAPGLELPKKPVQTHSHPPKTRELGIGWLPNGQHMATREMPAATPF---KYI 842
Query: 595 LLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDH 654
+A +DLP + + + + Y T + R V+ + M+ + D+
Sbjct: 843 SAEEAAADLPPIHDAKPDICVPYPDHRSTSGLTKMMRARISVIPVRPWGMSFAQAWYGDN 902
Query: 655 RPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYA 714
K +G + G + + ER + +
Sbjct: 903 -----------------KAEGGS-----GTMT----------AAERELFTGTNGVRDTSK 930
Query: 715 MKFEHQSSTKPFGRLWWDEIVNTVVTRAQPH---NRILLHPSQDRVLTIRENARLQGFPD 771
+ Q ++ +GR++ +++ +T+ TR + N LLH ++R+++I E R QGF D
Sbjct: 931 LPLSVQPQSRAYGRMFPNKLFDTITTRPTTNDAKNGRLLHWRENRLISIMEARRAQGFRD 990
Query: 772 CYQLFG-PVKE 781
L G PV +
Sbjct: 991 EEVLLGDPVNQ 1001
>gi|420441830|ref|ZP_14940775.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-36]
gi|393059959|gb|EJB60834.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-36]
Length = 352
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 128/341 (37%), Gaps = 89/341 (26%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQY--PLPT 562
G L + Y I+ A YG+PQ R RV L G + FK+ + P+ T
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGIHKSFKQKFHFSKPIKT 180
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVAR 622
H L DA+ DLP + + E+ D Y A
Sbjct: 181 H------------------------------FSLKDALGDLPPIQSGENGDALGYLKNAD 210
Query: 623 TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLP 682
F +++R N S P NN+ ++ K G + DLP
Sbjct: 211 NVFLEFVR-------NSKGLSEHSSPK----------NNEKLIKIMQTLK-DGQSKDDLP 252
Query: 683 GVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR- 741
E + KSG + ++WW++ T+
Sbjct: 253 ----------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNF 281
Query: 742 AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+ P + +HP RVL+IRE ARLQ FPD Y+ +G +
Sbjct: 282 STPSSSRCIHPRDSRVLSIREGARLQSFPDNYKFYGSASAK 322
>gi|420501298|ref|ZP_14999842.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
gi|393150104|gb|EJC50412.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
Length = 351
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 131/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+ Q R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVHQIRERVILVGALKRFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG T + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YTNTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ +G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYGSASAK 322
>gi|254779148|ref|YP_003057253.1| type II cytosine specific DNA methyltransferase [Helicobacter
pylori B38]
gi|254001059|emb|CAX29005.1| M. Hpy99XI, type II cytosine specific DNA methyltransferase
[Helicobacter pylori B38]
Length = 348
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 130/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L G + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGVLKRFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG T + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YTNTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDDYKFCGSASAK 322
>gi|420471951|ref|ZP_14970647.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-18]
gi|393091306|gb|EJB91938.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-18]
Length = 348
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 130/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKRFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGSASAK 322
>gi|421711470|ref|ZP_16150813.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
gi|407212619|gb|EKE82481.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
Length = 351
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 130/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ + G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQT-LQDGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGSASAK 322
>gi|9622224|gb|AAF89681.1| cytosine-specific methyltransferase [Bacillus sp. LU11]
Length = 365
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 146/344 (42%), Gaps = 88/344 (25%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+ D + GGPPCQ S + R+ +D + + + ++ +I ++PK + ENVV +
Sbjct: 63 EADVVIGGPPCQSFSLVGKRRS-----DDERGQLVWQYLRIINEIRPKCFVFENVVGLKS 117
Query: 505 FSGGFLARYAVGRLV---------SMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
A+ A G LV + Y+ + ++ A YG+PQ R R+F+ G R K
Sbjct: 118 ------AKTAEGNLVLDELIIAFREIGYEVQWSVLNAADYGVPQRRKRIFIVGTREGIKF 171
Query: 556 PQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
+PLPTH NE N+ K + + +A+ DLP + ++
Sbjct: 172 -NFPLPTH---------NE-------KGNDGKL---KWISVEEALGDLP---SPNTDGIV 208
Query: 616 KYGTVARTEFQKYIRLRRHD--VVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
KY T +Q +R D V S+ +++ ++ +H P
Sbjct: 209 KYSTEPLNPYQLKMRENNFDDYVTEHSTPKLSELDKMIIEHIPV---------------- 252
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKF-EHQSSTKPFGRLWWD 732
G N+ D+P + P +++ KF E T +GRL D
Sbjct: 253 -GGNYMDVPDFV--PSQRIK----------------------KFKETGGRTTCYGRLRPD 287
Query: 733 EIVNTVVTR-AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
+ T+ T +P+ +H + R++T+RE RLQGFPD Y++
Sbjct: 288 KPSYTINTHFNKPNVGCNIHYKEKRLITVREALRLQGFPDNYKI 331
>gi|322700739|gb|EFY92492.1| putative DNA cytosine methyltransferase [Metarhizium acridum CQMa
102]
Length = 950
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 143/358 (39%), Gaps = 54/358 (15%)
Query: 433 KGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FMDVIEYLKP 491
G S +P G VDFI GG PC GF+ N + E KN+ L+ F ++ +P
Sbjct: 541 SGNFSKSVPTIGSVDFISGGSPC---PGFSLLTNDKTTDEQRKNQSLVAAFASCVDLYRP 597
Query: 492 KYVLMENVVDILKFSGG----FLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLW 547
Y L+ENV I++ L+++ + +V + YQ ++ + A SYG Q R RVF+
Sbjct: 598 MYGLLENVPGIVQSKANRDQDVLSQF-ICAIVGIGYQAQVFCLDASSYGSAQRRSRVFIS 656
Query: 548 GARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVT 607
A P KLP P TH Y + + D + P
Sbjct: 657 FAAPNYKLPGKPQQTHS-----------HPPATRYTSFVKLPTGDALAERDFLRATPFSY 705
Query: 608 NNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERV 667
+ + + + I H + + + + +R SL+ RP+ ++ R
Sbjct: 706 STARQVTSGLPKIYSGQTHTCITFPDHRLASGLTKDLKARISLI-PTRPWGMDLRSASRE 764
Query: 668 CCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFG 727
P KG V L K P+ K + SS +G
Sbjct: 765 ILTPAEKG-------------------------VFLTKRKISEPN---KLDRSSSA--YG 794
Query: 728 RLWWDEIVNTVVTRAQPHNRI---LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
RL+ ++++ ++T+ P +R LH ++R L++ E R QGFPD + G E+
Sbjct: 795 RLYPNQLMGAIITKQTPGDRKHGRQLHWDENRGLSVMEARRAQGFPDDEVILGTPAEQ 852
>gi|420470231|ref|ZP_14968941.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-11]
gi|393086356|gb|EJB87033.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-11]
Length = 348
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 129/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFIFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKRFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|365853876|ref|ZP_09394139.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus parafarraginis
F0439]
gi|363711813|gb|EHL95522.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus parafarraginis
F0439]
Length = 425
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 137/335 (40%), Gaps = 71/335 (21%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VD + GGPPCQ S R RN D + ++D + +PK+ + ENV + F
Sbjct: 110 VDGVIGGPPCQAYSTIGRARNAPKKANDTRIYLYRYYIDFLRRYQPKFFVFENVKGLKSF 169
Query: 506 ---SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
G L + Y+ + YG+PQ R RV ++G
Sbjct: 170 RDSDGTLLLPKMIKEFKQAHYRLNYRTINMNEYGVPQTRERVIIFG-------------- 215
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVAR 622
+P ++ I + N + E+ + + + SDLP + + D KY +
Sbjct: 216 --------VPENSKQNIDKFFNELAKRREESLTVGETFSDLPKIKAGQHSD--KYQGIP- 264
Query: 623 TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFR--D 680
+EF K HD+ Q SRP+ RP ++ + Y++V + K++G N + D
Sbjct: 265 SEFIKKNYRYIHDI---PLTQNISRPN-----RP--IDLEIYKQV-VLAKQQGKNLKYND 313
Query: 681 LPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVT 740
LP +++ + + D +F+ SS KP +TVV
Sbjct: 314 LP----------------KKLQMHKHTNIFLD---RFKALSSDKP---------SHTVVA 345
Query: 741 RAQPHNRILLHP--SQDRVLTIRENARLQGFPDCY 773
+HP Q+R +T+RE ARLQGFPD Y
Sbjct: 346 HIAKDGHHYIHPDIKQNRSITVREAARLQGFPDDY 380
>gi|297788908|ref|XP_002862484.1| hypothetical protein ARALYDRAFT_920657 [Arabidopsis lyrata subsp.
lyrata]
gi|297308026|gb|EFH38742.1| hypothetical protein ARALYDRAFT_920657 [Arabidopsis lyrata subsp.
lyrata]
Length = 163
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
+ + LPLPG VDFI GGPPCQG SG NRF + + ++ +L F+ +Y +PKY L
Sbjct: 75 QKSTLPLPGQVDFINGGPPCQGFSGMNRFSD--RSWSKVQCEMILAFLSFADYFRPKYFL 132
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQ 524
+ENV I+ F+ G + + L+ M YQ
Sbjct: 133 LENVKKIVSFNNGQTFQLTIASLLEMGYQ 161
>gi|403161899|ref|XP_003322205.2| hypothetical protein PGTG_03742 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171974|gb|EFP77786.2| hypothetical protein PGTG_03742 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1210
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 84/195 (43%), Gaps = 28/195 (14%)
Query: 433 KGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPK 492
K R N LP PGD D I G PC S N R D KN + I YLKP
Sbjct: 605 KVIRVNELPRPGDFDLITAGFPCGSHSTLNVLRKAN----DSKNALCATALSFIAYLKPD 660
Query: 493 YVLMENV--VDILKFS-----------GGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQ 539
Y+ ENV +LK S FL R G L+S+ YQ + G++ A +G PQ
Sbjct: 661 YLFFENVWCAGLLKTSFINPGNDSVLNKAFL-RIINGALISLGYQVQFGVLQAAQFGSPQ 719
Query: 540 FRLRVFLWGARPFKKLPQYPLPTHEIVARG---VIP-----NEFQEIIVAYANNQPCQ-- 589
R R+ G R + P PTH G ++P ++ + A+ + C
Sbjct: 720 ARRRIIFAGTRHGLTAIKLPEPTHHYPDEGLAILLPTNDEKSDHNGHRLVRADYRKCSSG 779
Query: 590 LEKGVLLSDAISDLP 604
K + + DAISDLP
Sbjct: 780 ALKAITVHDAISDLP 794
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 665 ERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTK 724
ER+C IP + A+ R LP L + +P D+ +
Sbjct: 939 ERICNIPLKPNADHRHLPKPLRLKNLNTCRNPH--------------DFDGNY------- 977
Query: 725 PFGRLWWDEIVNTVVTRAQPHNR----ILLHPSQDRVLTIRENARLQGFPDCYQL 775
GRL + NT++T+ PHN+ +LHP+Q R L++ E R QGFPD ++L
Sbjct: 978 --GRLGFQGQFNTIITKMHPHNQNKCGAVLHPNQYRTLSLLEAQRAQGFPDRFKL 1030
>gi|308182632|ref|YP_003926759.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori PeCan4]
gi|308064817|gb|ADO06709.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori PeCan4]
Length = 351
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 131/341 (38%), Gaps = 89/341 (26%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQY--PLPT 562
G L + Y I+ A YG+PQ R RV L GA + FK+ + P+ T
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFKQKFHFHKPIKT 180
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVAR 622
H L DA+ DLP + + E+ D Y A
Sbjct: 181 H------------------------------FSLKDALGDLPPIQSGENGDALGYLKNAD 210
Query: 623 TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLP 682
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 211 NVFLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP 252
Query: 683 GVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR- 741
+ + KSG T + ++WW++ T+
Sbjct: 253 ----------------KNLRPKSG---------------YTNTYAKMWWEKPAPTITRNF 281
Query: 742 AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+ P + +HP R L+IRE ARLQ FPD Y+ G +
Sbjct: 282 STPSSSRCIHPRDSRALSIREGARLQSFPDDYKFCGSASAK 322
>gi|420435793|ref|ZP_14934792.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-27]
gi|420492530|ref|ZP_14991104.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-15]
gi|420506345|ref|ZP_15004860.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-74]
gi|420526553|ref|ZP_15024954.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-15b]
gi|393051652|gb|EJB52603.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-27]
gi|393106969|gb|EJC07512.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-15]
gi|393115850|gb|EJC16360.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-74]
gi|393131858|gb|EJC32281.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-15b]
Length = 351
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 129/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGAPQIRERVILVGALKRFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGSASAK 322
>gi|209544778|ref|YP_002277007.1| DNA-cytosine methyltransferase [Gluconacetobacter diazotrophicus
PAl 5]
gi|209532455|gb|ACI52392.1| DNA-cytosine methyltransferase [Gluconacetobacter diazotrophicus
PAl 5]
Length = 435
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 146/363 (40%), Gaps = 93/363 (25%)
Query: 435 YRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYV 494
+ + + L G VD + GGPPCQG S N R P +D +++ + V++ +E ++P+ +
Sbjct: 72 HETELAELRGKVDLVAGGPPCQGFS-MNGLRRP----DDPRSKMVDVYLHYVEIVRPRLI 126
Query: 495 LMENVVDILKF---SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
L+ENVV +GG + Y RL + Y T + I+ A +G+PQ R R L A P
Sbjct: 127 LLENVVGFRSMKHRTGGTYSDYTKRRLEAFGYDTWIEILRAADWGVPQRRPRFVLIAA-P 185
Query: 552 FKKLPQY-PLPTHEI------VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLP 604
LP P+ + VARG+ P+ S AISDL
Sbjct: 186 KGTLPGIDPMQRLRVARKAFLVARGLGPDHTSA-------------------SAAISDLE 226
Query: 605 LVTNNESEDERKYGTV-------ARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPF 657
++ E + ++G + +R Y RL R D +N R S R
Sbjct: 227 -ESDMEPGLDSEWGHLGFRALKRSREAATPYQRLMRVDSLNQPGDLRLPRHSTASVGRMR 285
Query: 658 QVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLK--SGKPLVPDYAM 715
+ ++ VC P + ER+ +K S PL PD
Sbjct: 286 DILDNCERGVCLRPVDR------------------------ERLGIKKRSTTPLAPDGPA 321
Query: 716 KFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
ST P D+ V H S+ R +T+RE+ARLQ FPD +
Sbjct: 322 P---TISTLP------DDFV---------------HYSKPRAMTVREHARLQSFPDWFSF 357
Query: 776 FGP 778
GP
Sbjct: 358 KGP 360
>gi|288958310|ref|YP_003448651.1| DNA (cytosine-5-)-methyltransferase [Azospirillum sp. B510]
gi|288910618|dbj|BAI72107.1| DNA (cytosine-5-)-methyltransferase [Azospirillum sp. B510]
Length = 375
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 132/335 (39%), Gaps = 92/335 (27%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FMDVIEYLKPKYVLMENVVDILK 504
D + GGPPCQG S + + + + L +M +E +PK ++ENV D K
Sbjct: 89 ADVVIGGPPCQGFSRLGKQTHGLPTEKSYEGNGLWAEYMRCVEQAQPKLFVVENVPDFFK 148
Query: 505 -FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
F+ + R A + YQ ++ A +G+PQ R R + G+R K P+ P+PTH
Sbjct: 149 HFAWEGIQREA----ARLGYQLAHAVLHAADFGVPQKRQRAIIIGSRVGK--PRLPMPTH 202
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVART 623
+ Q++ + QP + DAI DLPL NN
Sbjct: 203 Q-----------QKLNLL---GQPVWRT----VRDAIGDLPLEPNN-------------- 230
Query: 624 EFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPG 683
+ RHD N S + R IP G N +++P
Sbjct: 231 -------INRHDFRNASELSI--------------------RRYKAIP--PGGNRKNIPD 261
Query: 684 VLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-A 742
+ P K + +P KSG S GRL WD+ T+ T
Sbjct: 262 EIQLPCWKNK-NP-------KSG--------------GSADLMGRLLWDQPALTIRTEFL 299
Query: 743 QPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+P LHP R +T+RE ARLQ FPD ++ G
Sbjct: 300 KPEKGRYLHPQAHRSITVREGARLQTFPDDFKFAG 334
>gi|387907797|ref|YP_006338131.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori XZ274]
gi|387572732|gb|AFJ81440.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori XZ274]
Length = 352
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 129/339 (38%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+ Q R RV L G + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVTQIRERVILVGVLKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + ES D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGESGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
+ + KSG T + ++WW++ T+ +
Sbjct: 253 --------------KHLRPKSG---------------YTNTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGSASAK 322
>gi|313667088|gb|ADR72987.1| M2.BsmFI [Geobacillus stearothermophilus]
Length = 365
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 145/344 (42%), Gaps = 92/344 (26%)
Query: 447 DFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFS 506
D + GGPPCQ S + R+ +D + + + ++ +I ++PK + ENVV +
Sbjct: 65 DVVIGGPPCQSFSLVGKRRS-----DDERGQLVWQYLRIINEIRPKCFVFENVVGLKS-- 117
Query: 507 GGFLARYAVGRLV---------SMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
A+ A G LV + Y+ + ++ A YG+PQ R R+F+ G R K
Sbjct: 118 ----AKTAEGNLVLDELIIAFREIGYEVQWSVLNAADYGVPQRRKRIFIVGTREGVKF-N 172
Query: 558 YPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKY 617
+PLPTH NE +L K + + +A+ DLP + ++ KY
Sbjct: 173 FPLPTH---------NE---------KGDDGKL-KWISVEEALGDLP---SPNTDGIVKY 210
Query: 618 GTVARTEFQKYIRLRRHD--VVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
T +Q +R D V S+ +++ ++ +H P G
Sbjct: 211 SKEPLTPYQLKMRENNFDDYVTEHSTPKLSELDKMIIEHIPV-----------------G 253
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKF-EHQSSTKPFGRLWWDE- 733
N+ D+P + P +++ KF E T +GRL D+
Sbjct: 254 GNYMDVPDFV--PSQRIK----------------------KFKETGGRTTCYGRLRPDKP 289
Query: 734 --IVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
+NT R P+ +H + R++T+RE RLQGFPD Y++
Sbjct: 290 SYTINTYFNR--PNVGCNIHYKEKRLITVREALRLQGFPDNYKI 331
>gi|420494407|ref|ZP_14992976.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-16]
gi|393111208|gb|EJC11732.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-16]
Length = 351
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 129/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFQQICNAFKERGYILEHAILNALDYGVPQVRERVILVGALKRFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|242037791|ref|XP_002466290.1| hypothetical protein SORBIDRAFT_01g005082 [Sorghum bicolor]
gi|241920144|gb|EER93288.1| hypothetical protein SORBIDRAFT_01g005082 [Sorghum bicolor]
Length = 196
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 91/197 (46%), Gaps = 40/197 (20%)
Query: 592 KGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLL 651
+ + + D + DLP V N S+ +YG+ + FQK IR LL
Sbjct: 4 RSITVRDTVGDLPPVENGASKPTIQYGSEPVSWFQKKIR---------------DSTVLL 48
Query: 652 YDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL-- 709
DH ++N + R IPKR G ++ +LP E+V L +G+ +
Sbjct: 49 NDHISKEMNELNLIRCKHIPKRPGCDWHELPD---------------EKVKLSTGQMVDL 93
Query: 710 ----VPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIREN 763
+P+ A + H +GRL W+ T VT QP ++ HP QDR++T+RE
Sbjct: 94 IPWCLPNTAKR--HNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPEQDRIVTVREC 151
Query: 764 ARLQGFPDCYQLFGPVK 780
AR QGFPD Y+ G ++
Sbjct: 152 ARSQGFPDSYRFAGSIQ 168
>gi|119355930|ref|YP_910574.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides DSM
266]
gi|119353279|gb|ABL64150.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides DSM
266]
Length = 371
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 134/341 (39%), Gaps = 94/341 (27%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+V CG PCQ + + + A D + L+ F D++ P+ V +ENV + K
Sbjct: 80 EVKLFCGCAPCQPFTK-QKTNTKKDAASDDRRGLLIYFSDIVHACLPELVFVENVPGLQK 138
Query: 505 FS---GGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLP 561
FS GG LA + + RL DY ++AA YG PQ R R L +R K P P
Sbjct: 139 FSLEDGGPLAMF-ISRLKQNDYFVDFDVIAAQDYGSPQVRRRFVLIASRLGKI--TLPAP 195
Query: 562 THEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVA 621
TH PN + + DAI +LP V K+GT
Sbjct: 196 THG-------PNTKNSYVTVH---------------DAIGNLPSV---------KHGT-E 223
Query: 622 RTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANF-RD 680
+ Q Y +HR ++ + ER+ + GAN RD
Sbjct: 224 HPDNQNYP-----------------------NHRAAMLSALNLERI----RHTGANGRRD 256
Query: 681 LPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFE---HQSSTKPFGRLWWDEIVNT 737
P ER++ K YA K + ++ + + RL W E
Sbjct: 257 WP----------------ERLLPKC-------YAQKKDGKRYEGHSDCYTRLAWGEPAPG 293
Query: 738 VVTRAQPH-NRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ TR + N HP QDR +TIRE A+LQGFPD + G
Sbjct: 294 LTTRCISYSNGRFGHPEQDRAITIREAAKLQGFPDDFIFTG 334
>gi|333398774|ref|ZP_08480587.1| cytosine-specific methyltransferase [Leuconostoc gelidum KCTC 3527]
Length = 420
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 139/340 (40%), Gaps = 79/340 (23%)
Query: 449 ICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFS-- 506
+ GGPPCQ S R +N D + ++ +++ P++ + ENV +L F
Sbjct: 112 VIGGPPCQAYSTIGRAQNAPKKANDERIYLYRYYIQFLQHYHPEFFVFENVKGLLSFKDI 171
Query: 507 -GGFLARYAVGRLV--------SMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
G +L + G L+ + Y+ I+ YG+PQ R R+ ++G
Sbjct: 172 DGNYLLKRQNGVLIGRMYEDFRAAGYELDYRIVNTSEYGVPQARERIIIFGT-------- 223
Query: 558 YPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKY 617
P E EII ++ + E V L +A+SDLP + + ++ Y
Sbjct: 224 --------------PKEKSEIIQSFFSELEKLKEAPVTLKEALSDLPSLKS--GQEVNNY 267
Query: 618 GTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGAN 677
+ ++Y R+ D + L+ Q +RP++ D + +Q + K KG N
Sbjct: 268 ASSPSQYTRRY--FRKDDKLPLT--QNLARPNIERDLKIYQ--------LVLQSKIKGHN 315
Query: 678 FR--DLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIV 735
R +LP L N D ++R + L WD+
Sbjct: 316 MRYNELPENLRTHKN---VDKFLDR-------------------------YKALSWDKPS 347
Query: 736 NTVVTRAQPHNRILLHP--SQDRVLTIRENARLQGFPDCY 773
+T+V +HP +Q+R +T+RE AR+QGFPD +
Sbjct: 348 HTIVAHIAKDGHHYIHPDVNQNRSITVREAARIQGFPDDF 387
>gi|300775991|ref|ZP_07085850.1| possible DNA (cytosine-5-)-methyltransferase [Chryseobacterium
gleum ATCC 35910]
gi|300505124|gb|EFK36263.1| possible DNA (cytosine-5-)-methyltransferase [Chryseobacterium
gleum ATCC 35910]
Length = 415
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 150/365 (41%), Gaps = 85/365 (23%)
Query: 431 VTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLK 490
V + Y+ N+ L G V + GGPPCQG S R RN D+ N ++ +EY+
Sbjct: 69 VLRTYKKNLKSLRGSVSLVAGGPPCQGFSMAGR-RNETDERNDLINS----YIKFVEYVM 123
Query: 491 PKYVLMENVVDIL------KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRV 544
PK + ENV K G + +L ++ Y + ++ G YG+PQ R R
Sbjct: 124 PKVIFFENVKGFTMEFKKNKEKGIAYSSVVTQKLQNLGYYVKGKLVNFGDYGVPQKRTRF 183
Query: 545 FLWGARPFKKLPQYPLPTHEIV--ARGVIPNEFQEI-IVAYANNQPCQLEKGVLLSDAIS 601
L G R ++IV ++ ++ N F + +++ + L K L DAIS
Sbjct: 184 ILIGVR------------NDIVNSSQEIVDNFFSSLESKSFSFLEKRGLSKDTNLQDAIS 231
Query: 602 DLPLVTNN--ESEDER-----KYGTVARTEFQKYIR--LRRHDVVNLSSAQMASRPSLLY 652
DL L +N ES D + KYG ++ +QKY+R +RR +
Sbjct: 232 DL-LRSNGTQESPDTKNFQAGKYGQ-QQSSYQKYMRKWIRRE---------------IAD 274
Query: 653 DHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPD 712
HR PK A KV D S R L K +
Sbjct: 275 SHR--------------FPKHTPATSERF---------KVILDLSTNRRNLDVSKDVRER 311
Query: 713 YAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDC 772
Y +K + + P L D T+ T + +H S+ R+LT+RE AR+Q FPD
Sbjct: 312 YNLK---KHTIIP---LCGDSKSPTITTLPDDY----IHYSEPRILTVREYARIQSFPDW 361
Query: 773 YQLFG 777
Y+ G
Sbjct: 362 YEFQG 366
>gi|326381717|ref|ZP_08203411.1| cytosine-specific methyltransferase [Gordonia neofelifaecis NRRL
B-59395]
gi|326199964|gb|EGD57144.1| cytosine-specific methyltransferase [Gordonia neofelifaecis NRRL
B-59395]
Length = 356
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 139/341 (40%), Gaps = 83/341 (24%)
Query: 442 LPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVD 501
LP D++ GGPPCQG S + RN ED +N L F +++ L+PK ++ENV+
Sbjct: 72 LPEKPDWVVGGPPCQGYSTVGK-RN----REDPRNVLFLQFRRIVKGLRPKGFMIENVLG 126
Query: 502 ILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLP 561
+ S + + Y+ R ++ + +G+PQ R RV G R + L Q P
Sbjct: 127 LKDMS---YEQEVAESFKDLGYRVRFMVLTSAEHGVPQLRRRVVFVGHRD-RGLFQGPPI 182
Query: 562 THEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVA 621
TH+ E V ++DAI DLP ++ E+ E Y
Sbjct: 183 THDD-------------------------ETYVSVADAIFDLPELSAGEAATE--YTKPP 215
Query: 622 RTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDL 681
T +QK + L DV L +++ P L + + IP G N +
Sbjct: 216 STPYQKLMHL-PGDV--LQGHSVSNHPEHL------------VKAISYIP--DGGNRTAI 258
Query: 682 PGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR 741
P L + + S R L S +P V + T+ G+
Sbjct: 259 PPKL---QPRAGFHNSYSR--LASWRPAV----------AITQNLGK------------- 290
Query: 742 AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P +HP+QDR LT RE ARLQ FPD +Q G V +
Sbjct: 291 --PSGTRCIHPTQDRGLTTREGARLQSFPDRFQFLGGVTSQ 329
>gi|420395561|ref|ZP_14894788.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1124]
gi|393013997|gb|EJB15171.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1124]
Length = 352
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 128/334 (38%), Gaps = 85/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L G + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGVLKSFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
+ + KSG + ++WW++ T+ +
Sbjct: 253 --------------KNLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP R L+IRE ARLQ FPD Y+ G
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFCG 317
>gi|315222621|ref|ZP_07864510.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211]
gi|315188307|gb|EFU22033.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211]
Length = 417
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 131/334 (39%), Gaps = 74/334 (22%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D I GGPPCQ S R N D + ++D ++ KPK+ + ENV +L F
Sbjct: 109 LDGIIGGPPCQAYSTIGRANNKSKKSTDKRIYLYKHYLDFLDKYKPKFFVFENVKGLLSF 168
Query: 506 ---SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
SG L + Y+ I+ A +YG+ Q R R+ L G R K L
Sbjct: 169 KDLSGELLLPKIICEFDKCGYEVDYQIVDASNYGIVQKRERLILVGHR--KDL------- 219
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVAR 622
V N F + + Y P + + DLP + + S KY
Sbjct: 220 -------VFDNSFFDCLAEYVEVAPT-------IKELFEDLPSIKSGGS--SHKYRCDVS 263
Query: 623 TEF-QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFR-- 679
++F +KYIR ++ ++ +A RP N+ ++ K+KG N R
Sbjct: 264 SQFVEKYIR-KKDGILTQHTA------------RPHNENDLKIYKLVLKAKKKGKNLRYI 310
Query: 680 DLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVV 739
D+P L N + ++R + L + + +TVV
Sbjct: 311 DIPEELQTHSNTTSF---LDR-------------------------YKALDYGSVSHTVV 342
Query: 740 TRAQPHNRILLHPS--QDRVLTIRENARLQGFPD 771
+HP Q+R +T+RE AR+QGFPD
Sbjct: 343 AHIAKDGHYYIHPDLRQNRSITVREAARIQGFPD 376
>gi|323650451|gb|ADX97303.1| M.FseI [Frankia sp. Eul1b]
Length = 374
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 130/336 (38%), Gaps = 91/336 (27%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
D + GGPPCQG S + QA E ++N +M + KP ++ENV + LK
Sbjct: 85 ADVVVGGPPCQGFSRLGK----QARKERLENFLWKDYMRCVASSKPSVFVIENVPEFLK- 139
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
FL + Y+ + ++ A +G+PQ R R + G+R P P TH+
Sbjct: 140 DPAFLGVSEESE--KLGYKLTVSVLNAADFGVPQRRQRTIMIGSR--IGPPSLPRATHQ- 194
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
G N F E L + DAI DLPL NE
Sbjct: 195 -KPGDQMNLFTE------------LPTWSTVRDAIGDLPLEPTNE--------------- 226
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSL-LYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
NL +++ S+ SL Y H P G N +DLP
Sbjct: 227 ------------NLHNSRNVSKLSLERYRHVP-----------------PGGNRKDLPED 257
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
L PD DP + G ST GRL WD T+ T+ +
Sbjct: 258 LQ-PDCWRYKDP-------RGG--------------GSTDLMGRLEWDAPSLTIRTQFLK 295
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
P LHP+ DR +T+RE ARLQ FPD ++ G V
Sbjct: 296 PEKGRYLHPAADRSITVREGARLQTFPDDFKFTGSV 331
>gi|393245839|gb|EJD53349.1| S-adenosyl-L-methionine-dependent methyltransferase [Auricularia
delicata TFB-10046 SS5]
Length = 787
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 22/135 (16%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+VD IC G PCQG S N R + + N+Q+L + ++E L+P+YV +ENV I K
Sbjct: 383 NVDVICAGVPCQGHSRLNIHRGSKEGEHN--NQQMLTALSLVEVLRPRYVCIENVPAIDK 440
Query: 505 FS------------------GGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFL 546
++ GG R + L+++ YQ R+GI+ AG+YG PQ R R L
Sbjct: 441 WALKMRRETDDGIPIAADPHGGL--RLTITILLALGYQVRVGILQAGNYGTPQSRRRFIL 498
Query: 547 WGARPFKKLPQYPLP 561
A LP P P
Sbjct: 499 LAAEFGSTLPDLPRP 513
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 726 FGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKE 781
+ RL D+ +T+VT+ P + ++HPSQ+R++++RE AR QGFPD ++ G + E
Sbjct: 685 YRRLNNDDAFSTLVTKVHPTGKQSQVIHPSQNRLISVREMARGQGFPDSFRFEGSITE 742
>gi|428314437|ref|YP_007125413.1| DNA-methyltransferase Dcm [Microcoleus sp. PCC 7113]
gi|428256049|gb|AFZ22007.1| DNA-methyltransferase Dcm [Microcoleus sp. PCC 7113]
Length = 399
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 151/349 (43%), Gaps = 66/349 (18%)
Query: 442 LPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVD 501
L G VD + GG PC+G F + RN Q D NR + F +++ L P + ENV
Sbjct: 70 LNGGVDLVVGGSPCRG---FTQIRNGQDTHSDPNNRLAIKFAEIVRELSPLAFIYENVPQ 126
Query: 502 ILKFSGGFLARYAVGRLVSMD-YQTRLGIMAAGSYGLPQFRLRVFLWGAR-PFKKLPQYP 559
+ K R+ +GRL + Y+ ++ A ++G P R R+ + G R F +LP P
Sbjct: 127 LEKSR--VFKRF-IGRLKGRNNYRVAHAVLEAANFGNPSRRARLIVVGIRWDFGRLPIIP 183
Query: 560 ----LPTHEIVARGVIPNEFQEIIVAYANN-----QPCQLE----KGVLLSDAISDLPLV 606
+P + R V Q+ + Y + + C L+ + V + AI+DLP++
Sbjct: 184 KGVDIPHQQFWLRRV----EQDGKIGYCSKLQEPWRSCLLDPDDCRLVNVEQAIADLPIL 239
Query: 607 TNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYER 666
R YG ++ +Q++ R + + + R V + ER
Sbjct: 240 EGKTKGSNRSYGVPPQSAYQRWARQYTQE----TDGHVVPR-----------VRPETRER 284
Query: 667 VCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPF 726
+ I G N+RDLP L ++ ++P+ SG+ ++ H S+ +
Sbjct: 285 LKAI--VPGGNWRDLPTPLT---YRIPFEPA-------SGQ-------LRRSHYSAYR-- 323
Query: 727 GRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
RL + TV Q H+ H +R LT RE ARL GF D +QL
Sbjct: 324 -RLLPESHSPTV----QGHSDFAYHYKYERALTPRELARLMGFTDNFQL 367
>gi|310657622|ref|YP_003935343.1| Cytosine-specific methyltransferase [[Clostridium] sticklandii]
gi|308824400|emb|CBH20438.1| Cytosine-specific methyltransferase [[Clostridium] sticklandii]
Length = 344
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 134/336 (39%), Gaps = 95/336 (28%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D I GGPPCQG+S P+ ED +N L F+ +++ ++PK ++ENV ++
Sbjct: 69 IDLIVGGPPCQGMS----LSGPRK-FEDPRNELYLSFIRLVKEIQPKAFVIENVPGLVSL 123
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
G + + + M Y+ R IM A YG+PQ R RV G + K+
Sbjct: 124 FKGKIKDSIIEKFSEMGYKVRFEIMCASDYGVPQSRKRVIFVGHQD-KEF---------- 172
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
EF E + Y C++ A+SDLP + + +E Y + ++
Sbjct: 173 --------EFPEKMNTYVT---CEM--------ALSDLPPLEDCLGNEESPYYKDPQNDY 213
Query: 626 QKYIR----LRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDL 681
Q+ +R + R+ + S Q+ SL+ D G N++DL
Sbjct: 214 QQIMRQHSSILRNHIAAKHSEQVKHIISLVPD---------------------GGNYKDL 252
Query: 682 PGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR 741
P + N +++ + R K P T+ T
Sbjct: 253 P---IEYKNTRKFNVAWTRFNSKKPAP----------------------------TIDTG 281
Query: 742 AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ H H +RV T+RE+ARLQ FPD + G
Sbjct: 282 HRHH----FHYKYNRVPTVRESARLQSFPDDFVFLG 313
>gi|301321463|gb|ADK70106.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma mycoides subsp.
mycoides SC str. Gladysdale]
Length = 493
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 124/335 (37%), Gaps = 87/335 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
V+ I GGPPCQG S + + L D +N +++++ L+P+ ++ENV +L
Sbjct: 46 VNMIIGGPPCQGFSN----KGKKLGLNDKRNFLFKEYLEIVGKLQPEIFIIENVKTMLTT 101
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLR--VFLWGARPFKKLPQYPLPTH 563
+ G+ + Y G++ A +G+PQ R R + P K P+ H
Sbjct: 102 ANGYFLDQIQNTAKQLGYFVEYGVLNAYDFGVPQTRSRTTIICHKNHPIK----LPIGNH 157
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVART 623
K V + DAISDL + +N+ E E Y ++
Sbjct: 158 ----------------------------KKVNIEDAISDLNYLNSNQGEFESNYLLEPKS 189
Query: 624 EFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPG 683
E+QK +R + LY+H + +++ IP G + L
Sbjct: 190 EYQKMMR---------------KNSNKLYNHITTNHSKIALKKLALIPAECGKEY--LSN 232
Query: 684 VLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA- 742
L G Q +GRL W E T+ TR
Sbjct: 233 ELKGK-------------------------------QKFNTTWGRLKWKEPSPTIDTRFD 261
Query: 743 QPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P N HP +R +T RE AR+Q F D + G
Sbjct: 262 TPSNGTNSHPVLNRTITPREAARIQSFDDNFCFLG 296
>gi|284989342|ref|YP_003407896.1| DNA-cytosine methyltransferase [Geodermatophilus obscurus DSM
43160]
gi|284062587|gb|ADB73525.1| DNA-cytosine methyltransferase [Geodermatophilus obscurus DSM
43160]
Length = 671
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 126/348 (36%), Gaps = 90/348 (25%)
Query: 446 VDFICGGPPCQGVSGFNR----------FRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
V+ + GGPPCQ S R R+P D+ +++V+ +PK V+
Sbjct: 116 VELLAGGPPCQPFSKAGRSKIRDRVRRGLRDPHDQRRDLWRS----YLEVVRLAEPKAVI 171
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
MENV D+ F+ R V L + Y ++ +YG+PQFR R+
Sbjct: 172 MENVPDMALDREMFIFRSIVEELEQLGYSVEGRVLDCRAYGIPQFRQRL----------- 220
Query: 556 PQYPLPTHEIVARGVIPNEFQEIIVAYANNQ----PCQLEKGVLLSDAISDLPLVTNNES 611
IIVA N P E+ V + +AI DLP V
Sbjct: 221 ----------------------IIVALRNGHVFEWPAVAEQTVNVWNAIGDLPEVEGGWR 258
Query: 612 EDERKYGTVARTE-FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCI 670
G +Y RL R ++ SA+ LYDH V DD
Sbjct: 259 PAGGADGWADYAGPVTEYQRLMRQGILGAESAR-------LYDHITRPVREDD------- 304
Query: 671 PKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLW 730
F + D++ R+ +P+ A ++ + RL
Sbjct: 305 ----AIAFEHM-------DHETRYSE-------------LPESAQRYRTDIFHDKYKRLD 340
Query: 731 WDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGP 778
+ T+ +HP Q R +TIRE ARLQ FPD ++ GP
Sbjct: 341 ENHFSRTITAHIAKDGYWYIHPRQGRTITIREAARLQSFPDWFRFAGP 388
>gi|162149538|ref|YP_001603999.1| cytosine-specifi methyltransferase DdeI [Gluconacetobacter
diazotrophicus PAl 5]
gi|161788115|emb|CAP57719.1| putative cytosine-specifi methyltransferase DdeI [Gluconacetobacter
diazotrophicus PAl 5]
Length = 435
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 148/363 (40%), Gaps = 93/363 (25%)
Query: 435 YRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYV 494
+ + + L G VD + GGPPCQG S N R P +D +++ + V++ +E ++P+ +
Sbjct: 72 HETELAELRGKVDLVAGGPPCQGFS-MNGLRRP----DDPRSKMVDVYLHYVEIVRPRLI 126
Query: 495 LMENVVDILKF---SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
L+ENVV +GG + Y RL + Y T + I+ A +G+PQ R R L A P
Sbjct: 127 LLENVVGFRSMKHRTGGTYSDYTKRRLEAFGYDTWIEILRAADWGVPQRRPRFVLIAA-P 185
Query: 552 FKKLPQY-PLPTHEI------VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLP 604
LP P+ + VARG+ P+ S AISDL
Sbjct: 186 KGTLPGIDPMQRLRVARKAFLVARGLGPDHTSA-------------------SAAISDLE 226
Query: 605 LVTNNESEDERKYGTV-------ARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPF 657
++ E + ++G + +R Y RL R D +N R S R
Sbjct: 227 -ESDMEPGLDSEWGHLGFRALKRSREAATPYQRLMRVDSLNQPGDLRLPRHSTASVGRMR 285
Query: 658 QVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLK--SGKPLVPDYAM 715
+ D+ ER C+ LV ER+ +K S PL PD
Sbjct: 286 DI-LDNCERGVCL-------------RLV----------DRERLGIKKRSTTPLAPDGPA 321
Query: 716 KFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
ST P D+ V H S+ R +T+RE+ARLQ FPD +
Sbjct: 322 P---TISTLP------DDFV---------------HYSKPRAMTVREHARLQSFPDWFSF 357
Query: 776 FGP 778
GP
Sbjct: 358 KGP 360
>gi|312200922|ref|YP_004020983.1| DNA-cytosine methyltransferase [Frankia sp. EuI1c]
gi|311232258|gb|ADP85113.1| DNA-cytosine methyltransferase [Frankia sp. EuI1c]
Length = 384
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 130/336 (38%), Gaps = 91/336 (27%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
D + GGPPCQG S + QA E ++N +M + KP ++ENV + LK
Sbjct: 95 ADVVVGGPPCQGFSRLGK----QARKERLENFLWKDYMRCVASSKPSVFVIENVPEFLK- 149
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
FL + Y+ + ++ A +G+PQ R R + G+R P P TH+
Sbjct: 150 DPAFLGVSEESE--KLGYKLTVSVLNAADFGVPQRRQRTIMIGSR--IGPPSLPRATHQ- 204
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
G N F E L + DAI DLPL NE
Sbjct: 205 -KPGDQMNLFTE------------LPTWRTVRDAIGDLPLEPTNE--------------- 236
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSL-LYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
NL +++ S+ SL Y H P G N +DLP
Sbjct: 237 ------------NLHNSRNVSKLSLERYRHVP-----------------PGGNRKDLPED 267
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
L PD DP + G ST GRL WD T+ T+ +
Sbjct: 268 LQ-PDCWRYKDP-------RGG--------------GSTDLMGRLEWDAPSLTIRTQFLK 305
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
P LHP+ DR +T+RE ARLQ FPD ++ G V
Sbjct: 306 PEKGRYLHPAADRSITVREGARLQTFPDDFKFTGSV 341
>gi|46138503|ref|XP_390942.1| hypothetical protein FG10766.1 [Gibberella zeae PH-1]
Length = 1343
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 7/143 (4%)
Query: 425 EKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FM 483
+ ++ F +G + +P GDVDFI GG PC GF+ N + + KN+ L+ F
Sbjct: 865 DDMQRFAIQGKFAENVPPVGDVDFISGGSPC---PGFSLLTNDKTTVAQRKNQSLVAAFG 921
Query: 484 DVIEYLKPKYVLMENVVDILKFSGGF---LARYAVGRLVSMDYQTRLGIMAAGSYGLPQF 540
I+ +P+Y L+ENV I++ + + +V + YQT+ + A S G PQ
Sbjct: 922 SFIDLYRPRYGLLENVPGIIQSKATRDQDVFSQLICAIVGLGYQTQFSFLDASSCGSPQR 981
Query: 541 RLRVFLWGARPFKKLPQYPLPTH 563
R RVF+ A P LPQ P TH
Sbjct: 982 RSRVFVVFAAPGHHLPQRPHITH 1004
>gi|342882968|gb|EGU83532.1| hypothetical protein FOXB_05942 [Fusarium oxysporum Fo5176]
Length = 1335
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
Query: 408 GPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNP 467
GPSE + P G + L+ +G S+ +P GDVDFI GG PC GF+R N
Sbjct: 843 GPSEVS--PFLG---SIDDLQRLAIEGEFSDSVPPIGDVDFISGGSPC---PGFSRLTND 894
Query: 468 QAALEDIKNRQLLV-FMDVIEYLKPKYVLMENVVDILKFSGGF---LARYAVGRLVSMDY 523
+ KN+ L+ F ++ +P+Y L+ENV I++ + + + +V + Y
Sbjct: 895 KTTAAQRKNQSLVAAFASCVDLYRPRYGLLENVPGIVQKTANRDQDVFSQLICAIVGLGY 954
Query: 524 QTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
Q + A + G PQ R RVFL A P +LP P TH
Sbjct: 955 QAHFFFLDASACGSPQRRSRVFLAFAAPGHRLPHKPYQTH 994
>gi|428311638|ref|YP_007122615.1| DNA-methyltransferase Dcm [Microcoleus sp. PCC 7113]
gi|428253250|gb|AFZ19209.1| DNA-methyltransferase Dcm [Microcoleus sp. PCC 7113]
Length = 411
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 146/377 (38%), Gaps = 73/377 (19%)
Query: 418 KGLSKCKEKLKEFVTKGYRSNILPL-PGDVDFICGGPPCQGVS--GFNRFRNPQAAL-ED 473
+ CK KL LP+ PG+VD + GGPPCQ S G + ++ + ED
Sbjct: 51 RNFPNCKFKLPALDISSLDLQKLPINPGEVDILIGGPPCQVFSRVGIGKMKSLGKKVEED 110
Query: 474 IKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSM--------DYQT 525
+N F+ ++Y KP + +MEN VD L ++ + + Y+
Sbjct: 111 PRNFLYKYFVKCLQYYKPLFFVMEN-VDALVLKKDLFSKILNSLELGLPRQRESFPGYRI 169
Query: 526 RLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANN 585
+ I+ A +YG+PQ R R+F+ G R ++ + P F+
Sbjct: 170 QHSILNASNYGVPQVRQRLFIVGIR------------QDLDFKFEFPKAFR--------- 208
Query: 586 QPCQLEKGVLLSDAISDL-PLVTNNESEDERKYGTVARTEFQKYIRLRR--HDVVNLSSA 642
K V +S+AISDL PL E+ G Q Y+ + + +
Sbjct: 209 -----RKKVSVSEAISDLIPLTPPYIPLREKSSGPKQLDTKQPYLSKPKSEYQIKMSKKI 263
Query: 643 QMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVM 702
+ P + +H ++ + +C G + DLP + + RWD ++
Sbjct: 264 RKKKEPDGVMNH--ICRAHNPLDMICFAMLSPGGKYLDLPEFM----RRYRWDIFDDK-- 315
Query: 703 LKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRE 762
+ RL WD+ T+ +HP Q+R +++RE
Sbjct: 316 -----------------------YKRLPWDKPAWTLTAHMGKDCLAYIHPKQNRSISVRE 352
Query: 763 NARLQGFPDCYQLFGPV 779
ARLQ FPD + P+
Sbjct: 353 AARLQSFPDDFVFDAPM 369
>gi|161621504|gb|ABX75256.1| cytosine-5-methyltransferase [Malus x domestica]
Length = 148
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LPLP VDFI GGPPCQG SG NRF Q+ ++ +L + +Y +PKY L+E
Sbjct: 63 NDLPLPWQVDFINGGPPCQGFSGMNRFN--QSTWSKVQCEMILASLSFADYFRPKYFLLE 120
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQT 525
NV +++ F+ G R + L+ M YQ
Sbjct: 121 NVRNLVSFNEGQTFRLTLASLLEMGYQV 148
>gi|384897195|ref|YP_005772623.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Lithuania75]
gi|317012300|gb|ADU82908.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Lithuania75]
Length = 348
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 128/339 (37%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L G + FK+ P P
Sbjct: 121 QKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGTLKSFKQKFHSPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDDYKFCGSASAK 322
>gi|257877765|ref|ZP_05657418.1| cytosine specific DNA methyltransferase [Enterococcus casseliflavus
EC20]
gi|257811931|gb|EEV40751.1| cytosine specific DNA methyltransferase [Enterococcus casseliflavus
EC20]
Length = 380
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 126/335 (37%), Gaps = 82/335 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
++D I GPPCQG S + D +N+ + + +++ +PK L+ENV +
Sbjct: 74 NIDVIIAGPPCQGFS-----LTGARDINDSRNKLYVAVVHAVDHFRPKAFLIENVPGMAT 128
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGI--MAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
G + + + M Y + + A YG+PQ R R+F G F+K Y
Sbjct: 129 LYKGAVKQQIINTFEDMGYSISVTDKPLLAADYGVPQMRKRMFFVG---FRKDLNY---- 181
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVAR 622
++ E AY + + V +DAISDLP + + ++ Y +
Sbjct: 182 -----------DYFEFPKAYLSK-----DNYVGTADAISDLPSLIDTLGQESVPYSKEPQ 225
Query: 623 TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLP 682
+++QK +R S +Y+H N+ D + +G N++DLP
Sbjct: 226 SDYQKLMR---------------KNSSCIYNH--VATNHTDEVKWVISQVPEGGNYKDLP 268
Query: 683 GVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA 742
E S++ F W
Sbjct: 269 -----------------------------------EGVGSSRKFNEAWTRYHSQKPSRTI 293
Query: 743 QPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+R H +RV T+RENARLQ FPD ++ G
Sbjct: 294 DTGHRNHFHYKWNRVPTVRENARLQSFPDYFEFLG 328
>gi|51892448|ref|YP_075139.1| site-specific DNA-methyltransferase [Symbiobacterium thermophilum
IAM 14863]
gi|51856137|dbj|BAD40295.1| site-specific DNA-methyltransferase [Symbiobacterium thermophilum
IAM 14863]
Length = 486
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 143/373 (38%), Gaps = 59/373 (15%)
Query: 446 VDFICGGPPCQGVSGFNR------FRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
VD I GGPPCQ + R +R+P+ D + L ++ ++ LKP ++MENV
Sbjct: 91 VDIIIGGPPCQAYARVGRAKLREIWRHPEGYKLDPRGDLFLHYLYYVDRLKPVALVMENV 150
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWG-ARPFKKLPQY 558
D L + G +A+ L +Y R ++ A YG+PQ R R+FL A P++
Sbjct: 151 PDALNYGGHNIAQEVADWLEDRNYVCRYTLLNAVHYGVPQMRERMFLIAVAGELGVEPEF 210
Query: 559 PLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEK-------------GVLLSDAISDLPL 605
P+PTH N + + QP +L V +AI DLP
Sbjct: 211 PVPTHAFTLPAGYKNARKVAMRTLGLLQPERLGSFVSPPTVDPALPPAVTAYEAIGDLPP 270
Query: 606 VT----NNESEDERKYG---TVARTEFQKYIRLRR--------HDVVNLSSAQMASRPSL 650
+T N R++ A Y RL R H + + + +
Sbjct: 271 ITAHLENRIGRGPRRFTEQVPYAGPPHSDYARLMRTWPGFEALHGISDHVIRYLPRDYRI 330
Query: 651 LYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLV 710
RP + Y + R GV + P ++ +R+ K V
Sbjct: 331 FARMRPGDQYPEAYAHALSLFMAAVERLRR-EGVDIAPGSE-----PYQRLW----KEYV 380
Query: 711 PDYAMKFEHQSSTKPFGRLWW----DEIVNTVVTRAQPHNRILLH--PSQDRVLTIRENA 764
P Y F WW D V T++ + +H +Q R +++RE A
Sbjct: 381 PPY--------DVSKFPNRWWKMERDLPVRTLMAHLGKDSYTHIHYDDAQARTISVREAA 432
Query: 765 RLQGFPDCYQLFG 777
RLQ FPD ++ G
Sbjct: 433 RLQSFPDGFRFAG 445
>gi|322708438|gb|EFZ00016.1| DNA (cytosine-5)-methyltransferase, putative [Metarhizium anisopliae
ARSEF 23]
Length = 1166
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 150/366 (40%), Gaps = 64/366 (17%)
Query: 433 KGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FMDVIEYLKP 491
G S +P G VDFI GG PC GF+ N + E KN+ L+ F ++ +P
Sbjct: 746 SGNFSKSVPTIGSVDFISGGSPC---PGFSTLTNDRTTDEQRKNQSLVAAFASCVDLYRP 802
Query: 492 KYVLMENVVDILKFSGG----FLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLW 547
KY L+ENV IL L ++ +V + YQ ++ + A S G Q R RVF+
Sbjct: 803 KYGLLENVPGILPSKANREQDVLGQFMCA-IVGIGYQAQVFYLDASSCGSAQRRSRVFIS 861
Query: 548 GARPFKKLPQYPLPTHE------IVARGVIPNEFQEIIVA--YANNQPCQLEKGVLLSDA 599
A P KLP P TH + G +P + ++ + P +S
Sbjct: 862 FAAPNYKLPGKPQQTHSHPPDTRYTSLGKLPTR-RHVLAERDFLRATPFSYSVARQVS-- 918
Query: 600 ISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQV 659
S LP + N +++ I H + + + +R SL+ +RP+ +
Sbjct: 919 -SGLPKIHNGQTD--------------TCIAFPDHRLARGLTKGLKARISLI-PNRPWGM 962
Query: 660 NNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEH 719
N R P + GV V + K+ KP + K +
Sbjct: 963 NLRSASRGILTPAER--------GVFV-------------TINRKTSKPNTEPH--KLDR 999
Query: 720 QSSTKPFGRLWWDEIVNTVVTRAQPHNRI---LLHPSQDRVLTIRENARLQGFPDCYQLF 776
QSS +GRL ++++ + T P++R LH ++R L++ E R QGF D +
Sbjct: 1000 QSSA--YGRLCPNQLIGAITTIQVPNDRKHGRQLHWHENRGLSVMEARRAQGFLDDEVIL 1057
Query: 777 GPVKER 782
G E+
Sbjct: 1058 GTPAEQ 1063
>gi|284046510|ref|YP_003396850.1| DNA-cytosine methyltransferase [Conexibacter woesei DSM 14684]
gi|283950731|gb|ADB53475.1| DNA-cytosine methyltransferase [Conexibacter woesei DSM 14684]
Length = 424
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 150/349 (42%), Gaps = 73/349 (20%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
D+D + GGPPCQ +++ RN ++D +NR F+ +++ ++P+ +++ENV+ + +
Sbjct: 75 DLDLLAGGPPCQA---YSQVRNHDRLIDDPRNRLYREFVGLLQEIRPRTLVLENVLGMSQ 131
Query: 505 FSGGFLARYAVGRLVSMD------YQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQY 558
GG AV R + D Y G++ AG +G PQ R R+ G R +
Sbjct: 132 LKGG-----AVRRQIEQDLSLQGAYDVISGVLDAGDFGTPQRRPRLVFIGVR--TDIGVA 184
Query: 559 P-LPTHEIVARGVI-PNEFQEIIVAYANNQPCQL-------EKGVLLSDAISDLPLVTNN 609
P LP ++R + + Q ++ ++P + V + A+SDL
Sbjct: 185 PGLPEGTGLSRALRNGHSGQPTEALFSLDRPLHEVLTDPGDRRAVTVQQALSDL------ 238
Query: 610 ESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCC 669
E Y + ++ +Q+++R++ + DH P + D R+
Sbjct: 239 -IEPGDVYSSRPQSAYQRWMRVKS---------------KVPQDHTPSAIREDTRRRLQA 282
Query: 670 IPKRKGANFRDLPGVLVG---PDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPF 726
IP G N DLP L+ D+K W P+ +G+ L + +
Sbjct: 283 IP--PGGNVYDLPEELLRRYLGDSK--WGPA------GNGERLARRHFYAYR-------- 324
Query: 727 GRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
RL D + T T+A H R L++RE AR+QGFPD +
Sbjct: 325 -RLHPDWLAWTANTKAD----FAYHYEVARGLSVREAARIQGFPDRFHF 368
>gi|420459983|ref|ZP_14958782.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-27]
gi|393077085|gb|EJB77834.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-27]
Length = 348
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 128/339 (37%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ ++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLYLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + DY I+ A YG+PQ R RV L G + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERDYILEHAILNALDYGVPQIRERVILVGTLKRFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+I E ARLQ FPD Y+ G +
Sbjct: 284 PSSSRCIHPRDSRALSIIEGARLQSFPDDYKFCGSASAK 322
>gi|390961243|ref|YP_006425077.1| hypothetical protein CL1_1080 [Thermococcus sp. CL1]
gi|390519551|gb|AFL95283.1| hypothetical protein CL1_1080 [Thermococcus sp. CL1]
Length = 445
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 152/391 (38%), Gaps = 86/391 (21%)
Query: 430 FVTKGYRSNILPLP------------GDVDFICGGPPCQGVSGFNRFRNPQAAL----ED 473
F T G + ++ LP GD+D + GGPPCQG S R + A +D
Sbjct: 54 FDTTGLKEDLRKLPPEVISKESGVQKGDIDVVVGGPPCQGFSIAGRVKIANLARNGKKKD 113
Query: 474 IKN---------RQLLV--FMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMD 522
+KN R +L F+ +++Y +PK V+MENV ++ G R V +
Sbjct: 114 VKNHHPRFIDDPRNILYREFVRIVDYFQPKIVIMENVPGMMSHRDGETVREIVDDFRRIG 173
Query: 523 Y-------QTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP----QYPLPTHEIVARGVI 571
Y I+ A +G+PQ R R+F G +K ++P+PTH+ +
Sbjct: 174 YIVPGWETGNNPRILNAADFGVPQTRRRIFFVGIHQDEKSLIDEFKWPIPTHKDPEQPPK 233
Query: 572 PNEFQEIIVAYANNQPCQLEKGVLLSDAISDL--PLVTNNESEDERKYGTVAR--TEFQK 627
N ++ Y + V + AI DL P+V N ++ + + +Q+
Sbjct: 234 KN-----LIDYISGDLHPKYPYVTVGQAIGDLPEPVVANRSGMEDYPMFHIIHPFSRYQE 288
Query: 628 YIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVG 687
+ R ++ + SRP + + +R+ +G +++DLP
Sbjct: 289 WAR-KKTSFWDGMVHNHISRP------------HTERDRLTFEHMEEGDSWKDLP----- 330
Query: 688 PDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR 747
+ + G + F +L WD T+ Q
Sbjct: 331 -----------QHIKAFYG----------YRDDIFRDKFKKLIWDRPSWTITAHLQKDGY 369
Query: 748 ILLHPSQDRVLTIRENARLQGFPDCYQLFGP 778
+HP + R LT RE ARLQ FPD + GP
Sbjct: 370 RYIHPVKPRTLTPREAARLQSFPDWFVFKGP 400
>gi|208434405|ref|YP_002266071.1| type II DNA modification enzyme [Helicobacter pylori G27]
gi|208432334|gb|ACI27205.1| type II DNA modification enzyme [Helicobacter pylori G27]
Length = 348
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 128/339 (37%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L G + FK+ +P P
Sbjct: 121 QKGQLFQQICNAFKERGYVLEHAILNALDYGVPQIRERVILVGTLKRFKQKFHFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLHPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ F D Y+ G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFSDNYKFCGSASTK 322
>gi|409082235|gb|EKM82593.1| hypothetical protein AGABI1DRAFT_125058 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1360
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 20/139 (14%)
Query: 441 PLP--GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMEN 498
P+P G+VDFI GGPPCQ SG N R +DI++ + +E+ Y L+EN
Sbjct: 945 PMPNRGEVDFIFGGPPCQSFSGANHHRQ----ADDIRSTMPCNMLSFLEHYDADYFLLEN 1000
Query: 499 VVDILKF-----------SGGF---LARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRV 544
V + + SGG + + + LV++ Q + ++ AG YG PQ R RV
Sbjct: 1001 VRGLANYPLLSEQKGRILSGGVKSGMVKLIMQCLVALGRQVQWKVLQAGQYGAPQNRERV 1060
Query: 545 FLWGARPFKKLPQYPLPTH 563
W A+ LP++P+P +
Sbjct: 1061 IFWAAKRGLVLPKHPVPLY 1079
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 708 PLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQP--HNRILLHPSQDRVLTIRENAR 765
PL + E ++ +GRL D +T+ P N LHP Q R++T+RE AR
Sbjct: 1235 PLALQPGHRVEPKTKKSFYGRLSNDGHFACTMTQLTPATKNARPLHPDQRRMVTVRELAR 1294
Query: 766 LQGFPDCY 773
QGFPD Y
Sbjct: 1295 SQGFPDNY 1302
>gi|385221953|ref|YP_005771086.1| type II DNA modification (methyltransferase) [Helicobacter pylori
SouthAfrica7]
gi|317010732|gb|ADU84479.1| type II DNA modification (methyltransferase) [Helicobacter pylori
SouthAfrica7]
Length = 348
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 127/339 (37%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG+PQ R RV L G + FK+ +P PT
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQMRERVILVGVLKSFKQKFYFPKPTKM 180
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+ L DA+ DLP + + E+ D Y A
Sbjct: 181 HFS----------------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R + L +H + N E + + + G + DLP
Sbjct: 213 FLEFVRNSKE----------------LSEHSSPKNNEKLIEIMQTL--KDGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++W ++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWLEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ +G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFYGSASAK 322
>gi|413915569|emb|CCM44165.1| DNA-cytosine methyltransferase [Staphylococcus xylosus]
Length = 359
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 135/336 (40%), Gaps = 86/336 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D I GGPPCQG S NR+ + +D +N+ ++ + ++PK ++ENV IL
Sbjct: 69 IDVIIGGPPCQGFSSANRYLKDE---DDPRNKLFYEYLRFVNIIRPKAFIIENVPGILTR 125
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
G+ + S DY + ++++ +YG+P+ R R F G R L
Sbjct: 126 DNGYAKEKILELTESYDYNVEVKVLSSENYGVPEIRKRAFFVGIRKDLNLK--------- 176
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
+AN +P + + + DAI DL ++ E + Y T+ E
Sbjct: 177 --------------FNFANLKP--IFENTTVHDAIKDLEVL-----ESGQLYNTLFGVEL 215
Query: 626 ---QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDD-YERVCCIPKRKGANFRDL 681
QKY SL ++ V+N+ ER+ +P +G N+RD+
Sbjct: 216 SPIQKY---------------YFDENSLQIENHNISVHNEKVVERIKHVP--QGGNWRDV 258
Query: 682 PGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR 741
P L WD H S+ + RL + + T+ T
Sbjct: 259 PEEL--------WDTKRNN-----------------RHSSAYR---RLDYSKPSITIDTG 290
Query: 742 AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ HP RV ++RE+AR+Q F D + +G
Sbjct: 291 HMNY----FHPVFHRVPSVRESARIQSFNDSFVFYG 322
>gi|379754157|ref|YP_005342829.1| DNA-cytosine methyltransferase [Mycobacterium intracellulare
MOTT-02]
gi|378804373|gb|AFC48508.1| DNA-cytosine methyltransferase [Mycobacterium intracellulare
MOTT-02]
Length = 669
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 137/350 (39%), Gaps = 90/350 (25%)
Query: 444 GDVDFICGGPPCQGVS----GFNRFRNPQAALEDIKN--RQLL-VFMDVIEYLKPKYVLM 496
+VD + GGPPCQ S R+R Q+ L D + R L F+++++ +PK VLM
Sbjct: 118 AEVDLVAGGPPCQPFSRAGRSMIRYRV-QSGLRDPHDERRDLWRSFLEIVDRARPKAVLM 176
Query: 497 ENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP 556
ENV D+ F+ R V L M+Y ++ A YG+PQFR R+
Sbjct: 177 ENVPDMALDREMFILRSMVEELEQMNYSVEERVIDAWRYGVPQFRQRL------------ 224
Query: 557 QYPLPTHEIVARGVIPNEFQEIIVAYANNQ----PCQLEKGVLLSDAISDLPLVTNNESE 612
I+VA +N P + V + +AI DLP V
Sbjct: 225 ---------------------ILVALQDNTEFRWPEEDPHKVTVWNAIGDLPEVEGGWRP 263
Query: 613 DERKYG----TVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVC 668
+ ++G + T+FQ+ +R V L+ + ++DH V +DD E
Sbjct: 264 EGGQHGWADYSGPVTQFQREMRAG----VALADSHK------VFDHITRPVRDDDRE--- 310
Query: 669 CIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGR 728
+ E + + + + ++ + R
Sbjct: 311 ----------------------------AFESMTHATKYTDLSEQHQRYRGDIFDDKYNR 342
Query: 729 LWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGP 778
L +++ T+ +HP Q R LT+RE ARLQ FPD ++ GP
Sbjct: 343 LNENDLSRTITAHIAKDGYWYIHPRQSRTLTVREAARLQTFPDDFRFDGP 392
>gi|428221921|ref|YP_007106091.1| DNA-methyltransferase Dcm [Synechococcus sp. PCC 7502]
gi|427995261|gb|AFY73956.1| DNA-methyltransferase Dcm [Synechococcus sp. PCC 7502]
Length = 441
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 137/344 (39%), Gaps = 71/344 (20%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDI- 502
++D + GG PCQG S + AL+D +N + F+ ++ L PKY ++ENV +
Sbjct: 75 AEIDVVFGGSPCQGFSLIGK-----RALDDPRNALVSHFLRLVTELNPKYFVLENVKGLT 129
Query: 503 LKFSGGFLARYAVGRLVSMDYQTR--LGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPL 560
+ FLA + S +Y+ ++ A YG+PQ R R+FL G R KLP YPL
Sbjct: 130 IGKHRQFLAE-VIAEFESHNYEVLRDYRVLNASHYGVPQSRDRLFLIGCRQGLKLPNYPL 188
Query: 561 PTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTV 620
P + G N QE + L + DAI+DLP + N R +
Sbjct: 189 PITKPPKLG--KNPPQEFV---------SLPNCPTVWDAIADLPKIENYPELMSRDFCIA 237
Query: 621 ARTE-FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFR 679
E Y RL + ++N S DDY + + N
Sbjct: 238 EYGECISDYARLMK-GLINSS---------------------DDYSYL------RVWN-- 267
Query: 680 DLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVV 739
P +L + SMER A + F +L + I NT+
Sbjct: 268 --PQLLTSSIRTIHSLQSMERFE-----------ATDYGKTEPISHFHKLDPNGICNTLR 314
Query: 740 TRAQPHNRIL------LHPSQDRVLTIRENARLQGFPDCYQLFG 777
P NR +HP R +T+RE ARL +PD ++ G
Sbjct: 315 A-GTPSNRGAFTSPRPIHPYLPRCITVREAARLHSYPDWFRFHG 357
>gi|341868925|gb|AEK98586.1| domain rearranged methyltransferase 1 [Vitis amurensis]
Length = 137
Score = 78.2 bits (191), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LPLPG VDFI GGPPCQG SG NRF Q+ ++ +L F+ +Y +PK+ L+E
Sbjct: 58 NNLPLPGQVDFINGGPPCQGFSGMNRFN--QSTWSKVQCEMILAFLSFADYFRPKFFLLE 115
Query: 498 NVVDILKFSGGFLARYAVGRLV 519
NV + + F+ G R + L+
Sbjct: 116 NVRNFVSFNKGQTFRLTLASLL 137
>gi|380019136|ref|XP_003693470.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like, partial [Apis
florea]
Length = 298
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 117/277 (42%), Gaps = 56/277 (20%)
Query: 544 VFLWGARPFKKLPQYPLPTHEIVARG-----VIPNEFQEIIVAYANNQPCQLEKGVLLSD 598
+ + A P + LP+YP PTH R ++ N+ + + P + + + D
Sbjct: 1 LIILAAAPGEVLPKYPEPTHVFSKRACQLSVIVDNKKYSSNCDWIESAP---YRTISVRD 57
Query: 599 AISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQ 658
A+SDLP + N + +E Y + FQ+ IR + D ++L DH
Sbjct: 58 AMSDLPNIRNGWNNEEIAYSDEPISHFQRKIRPKEPD-------------AILRDHICKD 104
Query: 659 VNNDDYERVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMERVMLKSGKPL---- 709
+ R+ IP G+++RDLP + V + K+ + ++V S L
Sbjct: 105 MAPLVEARIAHIPTASGSDWRDLPNIAVRLSDGTYSKKLEYMYHDKKVGKSSSGALRGVC 164
Query: 710 ----------------------VPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR 747
+P + H + +GRL WD T +T +P +
Sbjct: 165 SCCTGKMCDPIARQYNTLIPWCLPHTGKRHNHWAGL--YGRLEWDGFFGTTITNPEPMGK 222
Query: 748 I--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+LHP Q RV+++RE AR QGFPD ++ +G + ++
Sbjct: 223 QGRVLHPEQTRVVSVRECARSQGFPDSFRFYGNILDK 259
>gi|420495802|ref|ZP_14994366.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-23]
gi|393112113|gb|EJC12634.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-23]
Length = 351
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 128/339 (37%), Gaps = 85/339 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ S + + D K ++ +++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
G L + Y I+ A YG Q R RV L GA + FK+ +P P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGALQIRERVILVGALKRFKQKFYFPKP--- 177
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
I F L DA+ DLP + + E+ D Y A
Sbjct: 178 ------IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNV 212
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F +++R +S +++ S NN+ ++ K G + DLP
Sbjct: 213 FLEFVR---------NSKELSEHSS--------PKNNEKLIKIMQTLK-DGQSKDDLP-- 252
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQ 743
E + KSG + ++WW++ T+ +
Sbjct: 253 --------------ESLRPKSG---------------YINTYAKMWWEKPAPTITRNFST 283
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
P + +HP R L+IRE ARLQ FPD Y+ G +
Sbjct: 284 PSSSRCIHPRDSRALSIREGARLQSFPDNYKFCGSASAK 322
>gi|353236422|emb|CCA68417.1| hypothetical protein PIIN_02281 [Piriformospora indica DSM 11827]
Length = 1109
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 143/369 (38%), Gaps = 74/369 (20%)
Query: 440 LPLPGDVDFICGGPPCQGVSGF-----NRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYV 494
P PG+VD I GGPPC+ S + R R+P N+ L V E
Sbjct: 727 FPKPGEVDIIVGGPPCRPSSAYLRRLGKRPRSPDIQTWRNPNKSLYVGRRYTERGHHSGQ 786
Query: 495 LMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKK 554
+ ++ +F +G YQ R G++ AG +G+PQ R RVF+ A+
Sbjct: 787 APTHGNEVCRFLTNVSYLMLIG-----SYQVRYGVLNAGQHGVPQIRRRVFVIAAKRGNL 841
Query: 555 LPQYPLPTH---EIVARGVIPNEFQEIIVA--YANNQPCQLEKGVLLSDAISDLPL---- 605
LP P PTH V E + V+ NN P V + DAI+DLP
Sbjct: 842 LPDLPQPTHVAMHATHNTVTVEEGKVYTVSRRRENNAPLY---AVTVGDAITDLPQWEWV 898
Query: 606 -----------VTNNESEDERKYGTVARTEFQKYIRLR----------RHDVVNLSSAQ- 643
V E E K+G +A + I ++ + L++ Q
Sbjct: 899 NPHKLYKRTTRVKQEELERRWKHGILAIDVKSQPISTSLPVCGPDSPLQYPLPALTNYQL 958
Query: 644 -MASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVM 702
M R + + H +N + ERVC IP F+ G V PD+ ++
Sbjct: 959 LMRERSTTVTQHWTPALNELEIERVCNIP------FKSKRGDRVVPDHH-----GGIFLL 1007
Query: 703 LKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRE 762
+ P +A + Q +GRL +++ T S R+LTIRE
Sbjct: 1008 DLPSRLRRPGWA---DRQQLDGRYGRLDAEDVFAT---------------SLHRILTIRE 1049
Query: 763 NARLQGFPD 771
AR QGFPD
Sbjct: 1050 AARSQGFPD 1058
>gi|341868927|gb|AEK98587.1| domain rearranged methyltransferase 1 [Vitis amurensis]
Length = 137
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LPLPG VDFI GGPPCQG SG NRF Q+ ++ +L F+ +Y +PK+ L+E
Sbjct: 58 NNLPLPGQVDFINGGPPCQGFSGMNRF--TQSTWSKVQCEMILAFLSFADYFRPKFFLLE 115
Query: 498 NVVDILKFSGGFLARYAVGRLV 519
NV + + F+ G R + L+
Sbjct: 116 NVRNFVSFNKGQTFRLTLASLL 137
>gi|408399430|gb|EKJ78533.1| hypothetical protein FPSE_01342 [Fusarium pseudograminearum CS3096]
Length = 1348
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 425 EKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FM 483
+ ++ F +G + +P GDVDFI GG PC GF+ N + + KN+ L+ F
Sbjct: 870 DDMQRFAIQGKFTENVPPVGDVDFISGGSPC---PGFSLLTNDKTTVAQRKNQSLVAAFG 926
Query: 484 DVIEYLKPKYVLMENVVDILK---------FSGGFLARYAVGRLVSMDYQTRLGIMAAGS 534
I+ +P+Y L+ENV I+ FS A +V + YQT+ + A S
Sbjct: 927 SFIDLYRPRYGLLENVPGIIHSKVNRDQDVFSQLICA------IVGLGYQTQFFFLDASS 980
Query: 535 YGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
G PQ R RVF+ A P LPQ P TH
Sbjct: 981 CGSPQRRSRVFVVFAAPGHHLPQRPHITH 1009
>gi|421593952|ref|ZP_16038439.1| DNA methylase C-5 cytosine-specific family protein [Rhizobium sp.
Pop5]
gi|403699980|gb|EJZ17289.1| DNA methylase C-5 cytosine-specific family protein [Rhizobium sp.
Pop5]
Length = 605
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 142/343 (41%), Gaps = 80/343 (23%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYL-----KPKYVLMENVV 500
+D+ GP CQ VS F LED +N + F+ +++ +P++V+MENV
Sbjct: 73 IDWFFAGPTCQAVSTMGLFH-----LEDPRNALFVHFIRLLDGFTAAGRRPRHVVMENVP 127
Query: 501 DILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPL 560
++ + R Y ++ YGLPQ R R F+ A + P +P
Sbjct: 128 GVVYGRNLVIVRELFKLFKERGYHVFADVVNMADYGLPQLRNR-FILIATVDEVPPTFPR 186
Query: 561 PTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTV 620
TH + +G +L + V +S+AI+DL + E +
Sbjct: 187 HTHAPLKKG-------------------ELREYVSVSEAIADL---ASGEVDSRAVAKLS 224
Query: 621 AR---TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGAN 677
AR T FQ ++R D + Q +S S ++N +RV +P+ G +
Sbjct: 225 ARGRPTRFQSFVR----DGDGYAPNQHSSNLS--------EINR---KRVATVPQ--GGS 267
Query: 678 FRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFE--HQSSTKPFGRLWWDEIV 735
++D+P L+ PD RV L DYA + H++S ++ +
Sbjct: 268 WKDIPPELL-PDR-------FRRVRLT-------DYATLYGRLHEASPAYTISAGFNNVT 312
Query: 736 NTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGP 778
+ T HP DR LT+RE ARLQGF D ++ GP
Sbjct: 313 SGCFT----------HPIHDRALTVREGARLQGFRDSFEFLGP 345
>gi|291539766|emb|CBL12877.1| DNA-methyltransferase (dcm) [Roseburia intestinalis XB6B4]
Length = 366
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 126/332 (37%), Gaps = 77/332 (23%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQG S P+ + D +N L +++ + +KP+ V++ENV +L+
Sbjct: 76 LDVLVGGPPCQGFS----IAGPRD-MNDKRNSLYLAMVELADRIKPQAVVLENVPGMLQT 130
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
+GG AR V + Y ++ A YG+PQ R RVF G R K ++P P
Sbjct: 131 NGGIGARRIVEDFKKIGYVMIPKLLYAPDYGIPQMRKRVFFVGLRDGKTKFEFPEPV--- 187
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
E V +AI DLP + + E + E
Sbjct: 188 ----------------------VDKEHYVTCEEAIGDLPSLQTEKGE------IIYGEEI 219
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
Q Y N +M S + +H + + +P +G N++ LP
Sbjct: 220 QDYTM----KPANSYQRKMRSNSGKVLNHIGSIPIEKTRKMISLVP--EGKNYKALPEEY 273
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPH 745
G + Y S KP NT+ T + H
Sbjct: 274 QG----------------------IYKYHEALTRYHSKKP---------SNTINTGHRSH 302
Query: 746 NRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
H +R+ T+RE+ARLQ FPD + +G
Sbjct: 303 ----FHYKWNRIPTVRESARLQSFPDDFIFYG 330
>gi|367478095|ref|ZP_09477417.1| putative Cytosine-specific methyltransferase [Bradyrhizobium sp.
ORS 285]
gi|365269655|emb|CCD89885.1| putative Cytosine-specific methyltransferase [Bradyrhizobium sp.
ORS 285]
Length = 368
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 133/336 (39%), Gaps = 88/336 (26%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
D + GGPPCQG S N+ R + D + F+DV+E + +MENV ++
Sbjct: 69 ADVVIGGPPCQGFSLLNKNR-----IGDERRALWEPFLDVVELSGARTFVMENVAELYS- 122
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKK--LPQYPLPTH 563
S FLA R M ++ R ++ YG+PQ R R G FK +P +P PT
Sbjct: 123 SAEFLAIKR--RAKRMGFEMRAAVLNTADYGVPQTRKRTIALG---FKANLVPSFP-PT- 175
Query: 564 EIVARGVIPNEFQ-EIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVAR 622
P Q E +++ +L + + DAI+DLP GT
Sbjct: 176 --------PTHAQPETLLSK------RLPRWRTVRDAIADLPAT---------PIGTEIG 212
Query: 623 TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLP 682
TE + R+ ++S A+ A+ P G N DL
Sbjct: 213 TEKTLNLHFGRNPT-DISLARYAAVPP-------------------------GGNRFDL- 245
Query: 683 GVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA 742
+R L L P ++ + T FGRLWWD T+ T
Sbjct: 246 ----------------QRNALH----LTPQCWIR-KTSGGTDLFGRLWWDRPSVTIRTEF 284
Query: 743 -QPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+P LHP ++R +T RE ARL GFPD + G
Sbjct: 285 FKPEKGRYLHPVENRPITHREAARLMGFPDSFHFCG 320
>gi|417862918|ref|ZP_12507968.1| DNA-cytosine methyltransferase [Agrobacterium tumefaciens F2]
gi|338820180|gb|EGP54154.1| DNA-cytosine methyltransferase [Agrobacterium tumefaciens F2]
Length = 614
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 139/343 (40%), Gaps = 80/343 (23%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYL-----KPKYVLMENVV 500
+D+ GP CQ VS F L+D +N + F+ +++ KP++V+MENV
Sbjct: 81 IDWFFAGPTCQAVSTMGVFH-----LDDPRNALFVHFIRLLDGFTAAGRKPRHVVMENVP 135
Query: 501 DILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPL 560
++ + + Y ++ YGLPQ R R F+ A + P +P
Sbjct: 136 GVVYGQNLVIVKELFKIFKERGYYVFADVVNMADYGLPQLRNR-FILIATVNEVPPTFPR 194
Query: 561 PTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTV 620
TH V +G +L + V +S+AI+DL + +++D+
Sbjct: 195 HTHAPVKKG-------------------ELREYVSVSEAIADLAV---GQADDKAVVKLA 232
Query: 621 AR---TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGAN 677
R T FQ Y+R +H ++ + +RV +P+ G
Sbjct: 233 YRGRPTRFQSYVR---------------DGNGFAPNHHGNHLSEVNRKRVATVPQ--GGC 275
Query: 678 FRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFE--HQSSTKPFGRLWWDEIV 735
++D+P L+ PD RV L DYA + H++S ++ +
Sbjct: 276 WKDIPPELL-PDR-------FRRVRLT-------DYATLYGRLHEASPSYTISAGFNNVT 320
Query: 736 NTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGP 778
+ T HP DR LT+RE ARLQGF D ++ GP
Sbjct: 321 SGCFT----------HPIHDRALTVREGARLQGFRDSFEFLGP 353
>gi|428203215|ref|YP_007081804.1| DNA-methyltransferase Dcm [Pleurocapsa sp. PCC 7327]
gi|427980647|gb|AFY78247.1| DNA-methyltransferase Dcm [Pleurocapsa sp. PCC 7327]
Length = 418
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 143/344 (41%), Gaps = 78/344 (22%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL- 503
D+D + GGPPCQG S + ++D +N + F+ V+ LKPK+ +MENV +
Sbjct: 79 DIDVVFGGPPCQGFSLIGK-----RVVDDPRNSLVFQFLRVVLELKPKFFVMENVRGLAV 133
Query: 504 ----KFSGGFLARYAV-GRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQY 558
K + + + G V +YQ ++ A YG+PQ R R+FL GAR +LP+Y
Sbjct: 134 GKQQKILETLIQEFQLQGYQVQKNYQ----VLNAACYGVPQARERLFLLGAREDFELPKY 189
Query: 559 PLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYG 618
P P + + V N F+ ++ P + DAI DLP
Sbjct: 190 PQP----ITQPVRLNNFKYKKLSNLPTAPT-------VWDAIGDLP-------------- 224
Query: 619 TVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANF 678
E + Y L R D V ++ + +S +L+ R + DDY + N
Sbjct: 225 -----EVEHYPELLRKDWV-IAECKGSSHYALIL--RGIKQLEDDYS------YDREYNL 270
Query: 679 RDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTK--PFGRLWWDEIVN 736
+ L + +R + E + + H + K F +L D I N
Sbjct: 271 QIL-------SSSIRTRHTAETI----------KRFQETRHGETEKISRFHKLHPDGICN 313
Query: 737 TVVTRAQPHNRIL-----LHPSQDRVLTIRENARLQGFPDCYQL 775
T+ +N +HP R +T+RE ARL +PD ++
Sbjct: 314 TLRAGTNKYNGAFTSARPIHPFTPRCITVREAARLHSYPDWFRF 357
>gi|404481780|ref|ZP_11017010.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium
OBRC5-5]
gi|404345084|gb|EJZ71438.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium
OBRC5-5]
Length = 180
Score = 77.0 bits (188), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
Query: 435 YRSNILPLPGD--VDFICGGPPCQG--VSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLK 490
Y+ NI P+ GD +D I GGPPCQG +SG +F +P +N+ L ++ +++ ++
Sbjct: 60 YKENIKPIIGDANIDVIIGGPPCQGMSLSGPRKFDDP-------RNKLYLSYIRLVDEIR 112
Query: 491 PKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR 550
PK ++ENV ++ GG + + + M Y+ I+ A YG+PQ R RV G +
Sbjct: 113 PKAFVIENVPGLVGLFGGQIKDSIIQKFSDMGYKIEYKILCAADYGVPQMRKRVVFVGYK 172
Query: 551 PFK 553
K
Sbjct: 173 KGK 175
>gi|341868929|gb|AEK98588.1| domain rearranged methyltransferase 1 [Vitis amurensis]
Length = 137
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
N LPLPG VDFI GGPPCQG SG NRF Q+ ++ +L F+ +Y +P++ L+E
Sbjct: 58 NNLPLPGQVDFINGGPPCQGFSGMNRFN--QSTWSKVQCEMILAFLSFADYFRPRFFLLE 115
Query: 498 NVVDILKFSGGFLARYAVGRLV 519
NV + + F+ G R V L+
Sbjct: 116 NVRNFVSFNKGQTFRLTVALLL 137
>gi|119513855|ref|ZP_01632813.1| DNA methylase, C-5 cytosine-specific family protein [Nodularia
spumigena CCY9414]
gi|119461493|gb|EAW42572.1| DNA methylase, C-5 cytosine-specific family protein [Nodularia
spumigena CCY9414]
Length = 318
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 95/217 (43%), Gaps = 34/217 (15%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAA---LEDIKNRQLLVFMDVIEYLKPKYVLMENVVD 501
++ + GGPPCQG S RN A L D +N+ F++ +E +P Y ++ENV +
Sbjct: 72 ELTVLIGGPPCQGFS-----RNTPAGYRYLNDSRNQLYRTFLEFVEEFRPLYAVIENVPE 126
Query: 502 ILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLP 561
ILK G + +L S+ Y+ + A YG+PQ R R F + +P P
Sbjct: 127 ILKAYNGVVREEITKQLESLGYKVISSSLNAAHYGIPQTRSRAFFLAS--LDNSLHFPEP 184
Query: 562 THEIVARGVIPNEFQEIIVAYANNQPCQ----LEKG----VLLSDAISDLPLVTNNESED 613
T+ F +I Y + C LE V + DAI DLP + +
Sbjct: 185 TN-----------FGDIRSDYRTMKSCNQLNLLEANFSPLVTVRDAIGDLPPLDAGQDYG 233
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVN-----LSSAQMA 645
E Y +T +Q IR + +VN LS Q+A
Sbjct: 234 EEVYPDAPQTTYQAMIRNKSLKIVNHVARALSPIQLA 270
>gi|312901967|ref|ZP_07761229.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0470]
gi|311290903|gb|EFQ69459.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0470]
Length = 412
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 133/336 (39%), Gaps = 76/336 (22%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D I GGPPCQ S R RN + ED + + +E PK+ + ENV +L +
Sbjct: 107 IDGIIGGPPCQAYSTIGRARNEKKKTEDERIYLYKYYSKFLEQFNPKFFIFENVKGLLSY 166
Query: 506 SGGF---LARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
+ L + S+ Y I+ + Y +PQ R R+F++G R K+
Sbjct: 167 KDQYNEKLLPKIIQEFESIGYDISYKIINSAEYEVPQKRERLFIFGIRKDLKISANIFFQ 226
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVAR 622
+G+ G+ + D +DLP + +S +E+ Y + +
Sbjct: 227 ELATEKGI----------------------GIKIKDLFNDLPEM---KSGEEKNYYSKYK 261
Query: 623 TEFQKYIR--LRRHDVVNLSSAQMASRPSLLYDHRPFQVNND-DYERVCCIPKRKGAN-- 677
K++R L+ +D +L Y+ F D + R+ I K+ G N
Sbjct: 262 AP-SKFVRENLKNNDT------------ALTYNVSRFNNERDREIYRLVAIAKKNGKNLK 308
Query: 678 FRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNT 737
+ +LP L N+ + ++R + L +++ +T
Sbjct: 309 YNELPKHLKSHKNETNF---LDR-------------------------YKSLSENDVSHT 340
Query: 738 VVTRAQPHNRILLHP--SQDRVLTIRENARLQGFPD 771
+V +HP Q+R +T+RE AR+Q FPD
Sbjct: 341 MVAHISKDGHYYIHPDIKQNRSITVREAARIQTFPD 376
>gi|351728349|ref|ZP_08946040.1| DNA (cytosine-5-)-methyltransferase [Acidovorax radicis N35]
Length = 502
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 140/344 (40%), Gaps = 64/344 (18%)
Query: 443 PGDVDFICGGPPCQGVSGFNRFRNPQAA------LEDIKNRQLLVFMDVIEYLKPKYVLM 496
P VD I GGPPCQ GF++ R A + D + F+ ++Y +PK +M
Sbjct: 46 PNRVDLIVGGPPCQ---GFSKARQVDGANHGDRLVHDPRRDLYKEFLRYVKYYQPKVFIM 102
Query: 497 ENVVDILKFSGG-FLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
ENV + +GG F R V + Y+ + A +G+PQ R+R G R ++L
Sbjct: 103 ENVPGLRSAAGGEFFTRVQVESR-ELGYRVIPYEVKAWRFGVPQKRVRQLFIGTR--REL 159
Query: 556 PQYPLPTHEIVARGVIPNEF-QEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
P + IP+ + ++ V L+ V L +AI DLP + +
Sbjct: 160 PLF------------IPDRYIKQTHVGIGEPVEEGLQPPVTLGEAIGDLPYIVPGDDRFH 207
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDH--RPF-QVNNDDYERVCCIP 671
R Y R K R D V L A++P +L H RP Q + D+ R+
Sbjct: 208 RLYEPELRKAHIKKYGKRYIDKVLL-----ANKPKVLTAHTARPHSQRDLRDFMRL---- 258
Query: 672 KRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWW 731
+G N + + ME ++ + + R
Sbjct: 259 -NEGENSK----------QAIARGEEME---------------FPYDRDNFKDRYTRQHR 292
Query: 732 DEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
DE+ +T+V + + +HP Q R L+ RE AR+Q FPD + L
Sbjct: 293 DELCSTIVAHLKKDGLMFIHPVQCRSLSPREAARIQSFPDTFLL 336
>gi|254470861|ref|ZP_05084264.1| DNA-cytosine methyltransferase [Pseudovibrio sp. JE062]
gi|211960003|gb|EEA95200.1| DNA-cytosine methyltransferase [Pseudovibrio sp. JE062]
Length = 498
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 145/374 (38%), Gaps = 56/374 (14%)
Query: 446 VDFICGGPPCQGVSGFNRFR------NPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
+D I GGPPCQ + R + +P+A D + R ++ +E KP VLMENV
Sbjct: 93 IDIIIGGPPCQAFARVGRPKLREVDEHPEAFRHDPRARLYQEYLHYVEAFKPVAVLMENV 152
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWG-ARPFKKLPQY 558
D L G +A L + Y ++ A YG+PQ R R+FL R +
Sbjct: 153 PDALNHGGQNIAEEICEVLETKGYVAGYTLLNAAYYGVPQMRERMFLLAYRREITDSIVF 212
Query: 559 PLPTH----------------EIVARG-VIPNEFQEIIVAYANNQPCQLEKGVLLSDAIS 601
P PTH + + RG +I F I A +L V A+
Sbjct: 213 PKPTHWVQLPPGYEGSRAVALKFLKRGNLIKGAFDYIAPPEAT---AELIPAVTAFQALG 269
Query: 602 DLPLVTNNESEDERKYGTVARTEFQKYIRLRRHD--VVNLSSAQMASRPSLLYDHRPFQV 659
DLP + + E G + R RR D V + Q++ L+ F+
Sbjct: 270 DLPAIF---ARKELAEGRLTRGA-------RRFDQPVPYGQAIQLSDYARLMRSWSGFEA 319
Query: 660 NNDDYERVCCIPKRKGANFRDL-PG---VLVGPDNKVRWDPSMERVMLKSGKPLVPDYAM 715
N + V R F L PG KV + ++E V K G +V D A
Sbjct: 320 GNALSDHVIRYLPRDYPLFARLKPGDQYPQAFKQAKVMFQEALE-VRAKQGNTIVEDSAE 378
Query: 716 KFEHQSSTKP----------FGRLWWDEIVNTVVTRAQPHNRILLHPSQD--RVLTIREN 763
+ S P + ++W D T++ + +H D R +++RE
Sbjct: 379 YEALKKSIVPPYDPGKFPNKWRKMWQDAPARTLMAHLGKDSYSHIHYDHDQARTISVREA 438
Query: 764 ARLQGFPDCYQLFG 777
ARLQ FPD ++ G
Sbjct: 439 ARLQSFPDGFKFSG 452
>gi|422928020|ref|ZP_16960962.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis ATCC
29667]
gi|422931016|ref|ZP_16963947.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis SK340]
gi|339617584|gb|EGQ22206.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis ATCC
29667]
gi|339620198|gb|EGQ24768.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis SK340]
Length = 407
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 146/356 (41%), Gaps = 82/356 (23%)
Query: 435 YRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYV 494
+ N+ L G VD + GGPPCQG S + +N +D++N+ + ++++I+ ++PK +
Sbjct: 83 HSENLASLSGKVDLVVGGPPCQGFSMAGKRQN-----DDVRNQLMHSYVEIIKLVQPKML 137
Query: 495 LMENVVDILKFSGGF--------LARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFL 546
ENV F+ F + + L + YQ I+ +G+PQ R R L
Sbjct: 138 FFENVQG---FTVDFKDHKDKKNYSNILISELKRLGYQLDYKIITMSDFGIPQNRKRFIL 194
Query: 547 WGARPFKKLPQYPLPTHEIVARGVIPN-EFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+ ++ T+EI + N +F + N+ ++ V +S AI+DL
Sbjct: 195 FASKN---------ETYEIFFEELFNNRDF------FLKNRGLKIP--VTVSQAINDLKN 237
Query: 606 VTNN-ESEDERKY--GTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNND 662
+S+D + + G R Y +L R ++ R SL HR
Sbjct: 238 SHGEIDSKDTKGFKNGKYGRM-ISSYQKLMRRNI---------ERGSLPDSHR------- 280
Query: 663 DYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSS 722
K + ++ + +R PSM V + + P
Sbjct: 281 -------FAKHRSETIDLFERLMDASEQSIRITPSMNLVEGLKKRGVTP----------- 322
Query: 723 TKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGP 778
L + I NT+ + + +H + R++T+RE+AR+Q FPD Y+ GP
Sbjct: 323 ------LKKNSICNTITSIPDDY----IHYDEPRIMTVREHARIQSFPDDYEFKGP 368
>gi|281491831|ref|YP_003353811.1| C-5 cytosine-specific DNA methylase [Lactococcus lactis subsp.
lactis KF147]
gi|281375542|gb|ADA65048.1| C-5 cytosine-specific DNA methylase [Lactococcus lactis subsp.
lactis KF147]
Length = 347
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 131/352 (37%), Gaps = 103/352 (29%)
Query: 435 YRSNILPLPGD--VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPK 492
Y +I PL D +D I GGPPCQG+S P+ ED +N L ++ ++ ++PK
Sbjct: 61 YEKDIKPLINDQKIDIIVGGPPCQGMS----LSGPRK-FEDPRNSLYLSYIRLVSEIRPK 115
Query: 493 YVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP- 551
++ENV + G + + + M Y+ I+ A +G+PQ R R+ G +
Sbjct: 116 AFVIENVPGLASLFKGQIKDSIIEKFTEMGYKVNYKILVASDFGVPQKRRRIVFVGLQND 175
Query: 552 -FK-KLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNN 609
F P++ + T E+ A+SDLP + +
Sbjct: 176 VFDFNFPEFGMVTTEM---------------------------------ALSDLPSLEDE 202
Query: 610 ESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCC 669
+E +Y + +QK +R ++N +A N + +
Sbjct: 203 LGTEESEYSNKPQNSYQKVMRTGSAKLMNHVAANH---------------NQKTKDIISL 247
Query: 670 IPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRL 729
+P G N++DLP E T+ F
Sbjct: 248 VP--AGGNYKDLP-----------------------------------EEFRETRNFHVA 270
Query: 730 WW----DEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
W D T+ T + H H +RV T+RE+ARLQ FPD + G
Sbjct: 271 WTRFPKDAPSPTIDTGHRHH----FHYQYNRVPTVRESARLQSFPDKFIFTG 318
>gi|402080297|gb|EJT75442.1| modification methylase DdeI [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1216
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 76/143 (53%), Gaps = 7/143 (4%)
Query: 425 EKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FM 483
+ + E KG +P G+V+FI GG PCQG S ++ +A KNR L+ F
Sbjct: 746 DTMLEKALKGECGPSVPAKGEVEFISGGSPCQGFSLLTANKSSEA---QKKNRSLVASFA 802
Query: 484 DVIEYLKPKYVLMENVVDILKFSGGFLARY---AVGRLVSMDYQTRLGIMAAGSYGLPQF 540
+++ +PKY ++ENV ++ S + Y + +V M YQ ++ + A +YG PQ
Sbjct: 803 SFVDFYRPKYGILENVSSMVGKSDNPGSDYFSQLLCAIVGMGYQIQIILGDAWTYGAPQS 862
Query: 541 RLRVFLWGARPFKKLPQYPLPTH 563
R RVFL A P LP+ P+ +H
Sbjct: 863 RSRVFLIFALPGCTLPERPMMSH 885
>gi|385261866|ref|ZP_10039983.1| putative modification methylase BspRI [Streptococcus sp. SK643]
gi|385192588|gb|EIF39993.1| putative modification methylase BspRI [Streptococcus sp. SK643]
Length = 406
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 160/356 (44%), Gaps = 57/356 (16%)
Query: 442 LPG-DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVV 500
+PG D+D + GG PCQG S N RN +ED +N L + VI+ +PK+ + ENV
Sbjct: 62 IPGTDIDVVIGGFPCQGFSIANSKRN----MEDHRNFLYLELLRVIKDKQPKFFVAENVK 117
Query: 501 DILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPL 560
+L G + V S+ Y+ ++ A YG+PQ R RV + G R + P +P
Sbjct: 118 GLLSMQKGKVIDMIVKDFESLGYKVDYRLLNAAEYGVPQARERVIIIGNRLGIENP-FPK 176
Query: 561 PTHEIVARGVIPNEFQEIIVAYANNQP------CQLEKGVLLSDAISDLPLVTNNESEDE 614
PTH+I+ + N F ++ A + +L+ G + + D V N+ + +
Sbjct: 177 PTHKIIVDNEL-NLFPDLPNAITTEEAIGFLSDVELQNGKVADHIVVDGRKVYNHIASTK 235
Query: 615 -------RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRP---FQVNNDDY 664
RKY V + E Y+R R D N ++ ++ Y H F+ +N+
Sbjct: 236 VQDTFFGRKY-PVNQHEICDYLRYYR-DKSNWTTKKIDDY--FGYKHTAGHWFRKDNNS- 290
Query: 665 ERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLK-SGKPLVPDYAMKFEHQSST 723
IPK +++ L +L ++D ++V+ KP+ + +++ +
Sbjct: 291 ---GSIPKP--SDWWKLKEIL-------KFDDKYDKVVTTLVEKPIRFEQSLRITN---- 334
Query: 724 KPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
WD +T +T P +H ++ R L+ RE A LQ FPD + +G +
Sbjct: 335 -------WDRPSDT-ITATSPE----IHVNKTRRLSARECAILQTFPDDFVFYGSL 378
>gi|158320926|ref|YP_001513433.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs]
gi|158141125|gb|ABW19437.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs]
Length = 423
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 134/335 (40%), Gaps = 65/335 (19%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D I GGPPCQ S R R+ +D +N +++ + KPK + ENV IL
Sbjct: 121 IDLIIGGPPCQAYSLVGRARDENNMEDDPRNYLYKLYIRFLNKYKPKAFIFENVPGILTA 180
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
G L R + + Y + M A +G+ Q R RV + G R K ++ P E
Sbjct: 181 FKGNLFRNLQAYMRRVGYNIQARKMDAKDFGVLQSRKRVIIIGWR---KDLEFDYPIFE- 236
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
+K +++ + DLP + + E D+ +Y R +
Sbjct: 237 -----------------------SDDKEFTVNNLLEDLPKINSGEIYDKFRY----RKKI 269
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
KY++ + V + +RP+ D +++ + + R +R + DLP L
Sbjct: 270 NKYLQNTQLRVEDDIITHHIARPNNERDLEIYRIAVETWNR-----ERARIKYTDLPERL 324
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPH 745
+ +N + ++R + +G K+ H TVV
Sbjct: 325 MTHNNLTSF---LDRFKVVAGDE-------KYSH-----------------TVVAHISKD 357
Query: 746 NRILLHPS--QDRVLTIRENARLQGFPDCYQLFGP 778
+HP Q+R +T+RE AR+Q FPD Y GP
Sbjct: 358 GHHYIHPDIEQNRSITVREAARIQSFPDDYYFEGP 392
>gi|318057151|ref|ZP_07975874.1| DNA-cytosine methyltransferase [Streptomyces sp. SA3_actG]
gi|318076183|ref|ZP_07983515.1| DNA-cytosine methyltransferase [Streptomyces sp. SA3_actF]
Length = 386
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 134/341 (39%), Gaps = 63/341 (18%)
Query: 446 VDFICGGPPCQGVSGFNR--FRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
VD I GGPPCQG SG NR + ED +N+ ++ ++ +KPK ++ENV L
Sbjct: 68 VDVIMGGPPCQGFSGLNRDDLKKKPPKSEDPRNKLWREYVRAVQVIKPKIFVIENVDRFL 127
Query: 504 K---FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP-QYP 559
+ ++ A A G L DY I+ A YG+PQ R R + R P ++P
Sbjct: 128 RSPEYAALCAATEADGPLA--DYHLTEKILNAADYGVPQARRRAIVIATRRDLGEPLRHP 185
Query: 560 LPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGT 619
+PTH R F+E + E L DLPL T GT
Sbjct: 186 IPTHR---RATDQLTFEEGRAPWLGVWDAVFEH-TLRVRLKEDLPLRTGA------PLGT 235
Query: 620 VARTEFQ-KYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANF 678
F K + +RR + LS A+ A+ P G N
Sbjct: 236 ELPGAFSGKELHIRR-NPTPLSLARYAAIPP-------------------------GGNR 269
Query: 679 RDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQS-STKPFGRLWWDEIVNT 737
DL +R + G P+ H S S GRL D T
Sbjct: 270 YDL----------------TDRTSVIDGVPVYLSTESWDNHTSGSGDVMGRLHKDRPSVT 313
Query: 738 VVTR-AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ T +P LHP++DR +T E A +QGFPD ++ +G
Sbjct: 314 IRTEFYKPEKGRYLHPTKDRPITHWEAALIQGFPDTFKWYG 354
>gi|172038906|ref|YP_001805407.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142]
gi|354552802|ref|ZP_08972110.1| DNA-cytosine methyltransferase [Cyanothece sp. ATCC 51472]
gi|171700360|gb|ACB53341.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142]
gi|353556124|gb|EHC25512.1| DNA-cytosine methyltransferase [Cyanothece sp. ATCC 51472]
Length = 427
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 81/190 (42%), Gaps = 24/190 (12%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQG S + LED +N + F+ ++ L+PKY +MENV +
Sbjct: 76 IDVVFGGPPCQGFSLMGK-----RCLEDDRNSLVKHFLRLVVELQPKYFVMENVRGMAIG 130
Query: 506 SGGFLARYAVGRLVSMDY--QTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
L V +Y QT + A +YG+PQ R R+FL GA+ KLP YP
Sbjct: 131 KHQILLEEIFDEFVKNNYRVQTEYKFLNAANYGVPQLRERLFLLGAKQGLKLPNYP---- 186
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVART 623
+ + Y L + DAI DLP V + + R +
Sbjct: 187 -------------DFVTKYNQQDNLSLPLTPTVKDAIQDLPEVNHYSELNHRDWVIANYG 233
Query: 624 EFQKYIRLRR 633
+ +Y+ R
Sbjct: 234 KPSQYVETLR 243
>gi|311977245|gb|ADQ20501.1| M2.BfuAI [Lysinibacillus fusiformis]
Length = 342
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNP---QAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVD 501
++D + GGPPCQG S + + + ED +N+ +L ++ ++ LKPKY ++ENV
Sbjct: 68 EIDVLIGGPPCQGFSTIGKRVSSNFERRTAEDERNKLILEYIRILNQLKPKYFVIENVKG 127
Query: 502 ILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLP 561
+L G + L Y +L ++ YG+PQ R RVF+ G R ++ +PLP
Sbjct: 128 LLTMDKGDFIKGVYKELDKTGYDYKLKLLNMADYGVPQLRERVFIIGNRLGHEV-NFPLP 186
Query: 562 TH 563
TH
Sbjct: 187 TH 188
>gi|94263940|ref|ZP_01287743.1| DNA (cytosine-5-)-methyltransferase [delta proteobacterium MLMS-1]
gi|93455685|gb|EAT05864.1| DNA (cytosine-5-)-methyltransferase [delta proteobacterium MLMS-1]
Length = 366
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 148/417 (35%), Gaps = 96/417 (23%)
Query: 375 EEFEVERLIAV------CYGDPNKTKKPGVYFKVRWKGYGPSEDTWE-PIKGLSKCKEKL 427
EE E +R I V C G +K G+ ++ T+E G C + +
Sbjct: 2 EEIEKKRKIVVFDFFCGCGGTSRGFQKAGIDVAFALDTGPDAKSTFERNFPGTFFCHKSI 61
Query: 428 KEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIE 487
E + CG PCQ F R + + A D K L F +E
Sbjct: 62 NELNASDLEPILQAHKNGYKLFCGCAPCQP---FTR-QFTERAKSDTKKNLLGQFGVFVE 117
Query: 488 YLKPKYVLMENVVDILKF----SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLR 543
+P +V +ENV + K G F A + L+ + Y G++AA YG PQ R R
Sbjct: 118 RHEPDFVFVENVPGLQKVPKHKDGPFPAFLEL--LMGLGYHITYGVVAAQDYGAPQLRRR 175
Query: 544 VFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDL 603
L ++ P PTH NN+ + + AI DL
Sbjct: 176 FILLASK--HGEIAIPPPTH-------------------GNNRENPYKT---VRHAIEDL 211
Query: 604 PLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDD 663
P + E+ ++ K L +HR ++ +
Sbjct: 212 PAIAAGETYNDPK----------------------------------LPNHRASHLSELN 237
Query: 664 YERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSST 723
R+ P G D P K W PS K G+ H T
Sbjct: 238 MRRIKASPHDGGGR-NDWP--------KNLW-PSCYTRTNKKGE----------VHPGHT 277
Query: 724 KPFGRLWWDEIVNTVVTRAQPH-NRILLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
+GR+WWD+ + TR + N HP QDR +++RE ARLQGF D ++ G +
Sbjct: 278 DCYGRMWWDKPATGLTTRCVSYSNGRFGHPVQDRAISVREAARLQGFDDSFEFTGSI 334
>gi|127439|sp|P05302.1|MTD1_DESNO RecName: Full=Modification methylase DdeI; Short=M.DdeI; AltName:
Full=Cytosine-specific methyltransferase DdeI
gi|79418|pir||S00543 site-specific DNA-methyltransferase (cytosine-specific) (EC
2.1.1.73) DdeI - Desulfovibrio desulfuricans
gi|40795|emb|CAA68505.1| DdeI methylase [Desulfovibrio vulgaris]
Length = 415
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 136/342 (39%), Gaps = 83/342 (24%)
Query: 445 DVDFICGGPPCQGVS-GFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
DVD I GGPPCQG S NR + +D +N + F+ +++ PK+ +MENV+ IL
Sbjct: 66 DVDGIIGGPPCQGFSLSGNRDQ------KDPRNSLFVDFVRFVKFFSPKFFVMENVLGIL 119
Query: 504 KF---SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPL 560
S ++ ++ Y+ + I+ A YG+PQ R RVF G + + L Q L
Sbjct: 120 SMKTKSRQYVKDIIAEEFSNVGYKVCVIILNACDYGVPQSRQRVFFIGLKSDRPLNQQIL 179
Query: 561 PTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTV 620
VI +E+ L +AISDLP++ E + + Y
Sbjct: 180 TP----PSKVIESEYTS------------------LEEAISDLPVIEAGEGGEVQDYPVA 217
Query: 621 ARTEFQKYIRLRRHDVVNLSSAQMASR-----PSLLYDHRPFQVNNDDYERVCCIPKRKG 675
R ++Q+ +R V N + + R ++ + V+ + +R KR
Sbjct: 218 PRNKYQENMRKGSTCVYNHVAMRHTQRLVDRFAAIKFGQSVKHVSEEHSQR-----KRGD 272
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIV 735
AN + G + +N +R P KP P A F+
Sbjct: 273 AN--SISGKVFSQNN-MRPYPY---------KP-CPTVAASFQSN--------------- 304
Query: 736 NTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+HP +R T RE AR+Q FPD Y G
Sbjct: 305 -------------FIHPFYNRNFTAREGARIQSFPDTYIFQG 333
>gi|417924522|ref|ZP_12567961.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis SK569]
gi|342835741|gb|EGU69971.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis SK569]
Length = 337
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 140/353 (39%), Gaps = 90/353 (25%)
Query: 442 LPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVD 501
L G VD + GGPPCQG S + +N +DI+N+ + +++ I+ ++P + ENV
Sbjct: 20 LNGSVDLVVGGPPCQGFSMAGKRKN-----DDIRNQLMHSYIEFIKLVQPTMLFFENVQG 74
Query: 502 ILKFSGGF--------LARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFK 553
F+ GF + V L + Y I+ YG+PQ R R L+ ++
Sbjct: 75 ---FTVGFKDHKDKQKYSDILVSELRELGYNLDYKIVTMSEYGVPQNRKRFILFASK--- 128
Query: 554 KLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQL-EKG----VLLSDAISDLPLVTN 608
G F E++ N+ C L ++G + +S AI+DL
Sbjct: 129 --------------NGAYEIFFDELL----KNKDCFLRDRGLKIPITISQAINDLKKSHG 170
Query: 609 N-ESEDERKY--GTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
+S+D + + G R Y +L R+++ R + HR
Sbjct: 171 EVDSKDTKAFKNGKYGRAT-SAYQKLMRNNI---------ERGAFPDSHR---------- 210
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKP 725
K K ++ + +R PSM V + + P
Sbjct: 211 ----FAKHKSETIDLFKRLMTASEKSIRITPSMNLVEGLKKRGVTP-------------- 252
Query: 726 FGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGP 778
L + I NT+ + + +H + R++T+RE+AR+Q FPD Y+ GP
Sbjct: 253 ---LKKNSICNTITSIPDDY----IHYDEPRIMTVREHARIQSFPDDYEFKGP 298
>gi|340518715|gb|EGR48955.1| predicted protein [Trichoderma reesei QM6a]
Length = 1044
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 19/149 (12%)
Query: 425 EKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FM 483
+ L+ +G ++ +PL GDVDF+ GG PC GF+R N + KN+ L+ F
Sbjct: 688 DDLQRLAIQGDFADNVPLIGDVDFVSGGSPC---PGFSRLTNDKTTAAQRKNQSLVAAFA 744
Query: 484 DVIEYLKPKYVLMENVVDILK---------FSGGFLARYAVGRLVSMDYQTRLGIMAAGS 534
++ +PKY ++ENV ++ FS A LV + YQT+ + A S
Sbjct: 745 SFVDLYRPKYGVLENVPGMVHKKHDRDRDVFSQLICA------LVGLGYQTQFFYLDASS 798
Query: 535 YGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
G PQ R R+F+ A P +LP P+ TH
Sbjct: 799 CGSPQRRSRIFIVFAAPGLELPDKPVQTH 827
>gi|332664528|ref|YP_004447316.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM
1100]
gi|332333342|gb|AEE50443.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM
1100]
Length = 420
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 136/337 (40%), Gaps = 64/337 (18%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
G VD I GGPPCQ S R R+ D +N + + +E +PK + ENV+ +
Sbjct: 107 GAVDLIIGGPPCQAYSVAGRSRSKTKMEGDPRNYLFVQYSAYLEKYQPKMFVFENVLGLK 166
Query: 504 KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
G + YQ +L + A ++G+ Q R R+ + G + KL
Sbjct: 167 SAKKGHYLSEMEKLFNAKGYQIKLFTIEAINFGVLQNRKRIIILGWQESAKLN------- 219
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVART 623
IP+ + +++ L++D ++DLP++ + D +
Sbjct: 220 -------IPDL-----------EDIKIKGNYLVADLLNDLPIIKAGQGIDRFLKYRTKTS 261
Query: 624 EFQKYIRLRRH-DVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLP 682
E+ ++ LR DV+ Q +RP D +++ +E+ +++ N+ DLP
Sbjct: 262 EYLEFHSLRNGIDVL----TQHVARPHSEQDKEIYKIAVQKWEK-----EQERLNYNDLP 312
Query: 683 GVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA 742
ER+ + D +F+ ++ P+ + TVV
Sbjct: 313 ----------------ERLKTHQNRTSFYD---RFKVVAANLPYSQ--------TVVAHI 345
Query: 743 QPHNRILLHP--SQDRVLTIRENARLQGFPDCYQLFG 777
+HP Q+R +T+RE ARLQ FPD Y G
Sbjct: 346 AKDGHYFIHPDIEQNRSITVREAARLQSFPDDYYFEG 382
>gi|119490455|ref|ZP_01622916.1| cytosine specific DNA methyltransferase (DDEM) [Lyngbya sp. PCC
8106]
gi|119453926|gb|EAW35081.1| cytosine specific DNA methyltransferase (DDEM) [Lyngbya sp. PCC
8106]
Length = 399
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 159/399 (39%), Gaps = 95/399 (23%)
Query: 415 EPIKGLSKCKEKLKEFVTKGYRSNILPLP-----------------GDVDFICGGPPCQG 457
EPI + C+ L + ++N+L L G +D + GG PCQG
Sbjct: 26 EPIWAVDNCQTALNLYELNLPKTNLLNLDLSRQLDVTSLIEKINFNGGIDLMVGGSPCQG 85
Query: 458 VSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV--VDILKFSGGFLARYAV 515
F + RN Q + N + F +++ L P + ENV ++ K FLA +
Sbjct: 86 ---FTQIRNGQDLTSNPNNNFAITFAKIVKALNPIAFIYENVPQIETYKVFKDFLAEFER 142
Query: 516 GRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP-FKKLPQYPLPTHEIVARGVIPNE 574
+ + Y+ ++ A ++G P R R+F+ G R ++P P + P +
Sbjct: 143 DKKYKISYR----VLEAVNFGNPSRRSRLFVVGFRSNLGRIPNIP------TGLDISPRQ 192
Query: 575 F--------QEIIVAYANNQP----------CQLEKGVLLSDAISDLPLVTNNESEDERK 616
F I ++P CQL V + AISDLP++T R
Sbjct: 193 FWLKRKEQDGNIFYLSGLSEPWYSLLLEPNNCQL---VNVEQAISDLPVLTTKTIGITRS 249
Query: 617 YGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGA 676
Y + R+ +QK+ R D++ H Q+ + +R+ I + G
Sbjct: 250 YASSPRSIYQKW---SRQDIIETDG------------HVVPQMRPETRKRLKEIVE--GG 292
Query: 677 NFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVN 736
N+RDLP L K+ + L SGK ++ H S+ + RL
Sbjct: 293 NWRDLPEALT---YKIPYK-------LNSGK-------LRRNHYSA---YRRLLSKGHSP 332
Query: 737 TVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
TV Q H+ H + +R LT RE ARL F D Y+L
Sbjct: 333 TV----QGHSDFAYHYAYERSLTPRELARLMSFTDDYKL 367
>gi|424912865|ref|ZP_18336239.1| DNA-methyltransferase Dcm [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392844022|gb|EJA96545.1| DNA-methyltransferase Dcm [Rhizobium leguminosarum bv. viciae USDA
2370]
Length = 408
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 149/376 (39%), Gaps = 92/376 (24%)
Query: 423 CKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
C+ + + S ++ L G +D I GGPPCQG S R RNP D +N+ +
Sbjct: 61 CEAMSTASLLANHGSFLVGLRGSIDLIAGGPPCQGFSFAGR-RNPN----DPRNKLTEEY 115
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGF----------LARYAVGRLVSMDYQTRLGIMAA 532
++++ + P+++L+ENV F+ F + GRL + Y+ ++ A
Sbjct: 116 IEIVSLVMPQFLLLENVRG---FTSAFKTSTEQQAIPYSEIVAGRLEDLGYKVFKKMLNA 172
Query: 533 GSYGLPQFRLRVFL--------WGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYAN 584
+G+PQ R R + GARPF + +E I +
Sbjct: 173 SRFGVPQPRPRFIMIAIRADLYTGARPFMHM--------------------EEAIRDFRI 212
Query: 585 NQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQM 644
E + + DAISDL E + + + + FQ+ R+ L+ Q
Sbjct: 213 GNGLPAEGDISVRDAISDL------EMDGAQLIPSTDTSGFQQI----RYTPRRLTPYQS 262
Query: 645 ASRPSLLYDHRPFQV---NNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERV 701
R SL P + N++D A FR + + P K +E +
Sbjct: 263 LMRKSLEPGFAPNSLRLPNHND---------ETSARFRRI--LTRFPKGKSLRKSDLEAL 311
Query: 702 MLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIR 761
K + F L +++ T+ T P + LLH S+ R+LT+R
Sbjct: 312 GTKK------------------QAFTPLHPNQLSKTITT--LPDD--LLHYSEPRILTVR 349
Query: 762 ENARLQGFPDCYQLFG 777
ENAR+Q FPD Y G
Sbjct: 350 ENARIQSFPDWYDFLG 365
>gi|416389243|ref|ZP_11685287.1| putative 5-methylcytosine methyltransferase [Crocosphaera watsonii
WH 0003]
gi|357264261|gb|EHJ13173.1| putative 5-methylcytosine methyltransferase [Crocosphaera watsonii
WH 0003]
Length = 291
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 121/295 (41%), Gaps = 66/295 (22%)
Query: 407 YGPSEDTWEPIKGLSKCKEKLKEF-----VTKGYRSNIL---------PLPGDVDFICGG 452
YG + +E I G+ K+ L F ++G ++ + +D I GG
Sbjct: 21 YGFQQAGFEVIAGIDNWKDALATFQKNHPTSQGILMDLAVASSSKISQQINKSIDVIVGG 80
Query: 453 PPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLAR 512
PPCQG S + RNP +D +N F+ VI+Y +PK ++MENV +++ + G +
Sbjct: 81 PPCQGFSISGK-RNP----DDPRNLLYKSFLRVIDYFQPKAIVMENVPNMVSMAQGRIRE 135
Query: 513 YAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIP 572
+ L + YQ + I+ A YG+PQ R RV G +P +
Sbjct: 136 QILTDLERLGYQVQYKILLASDYGVPQNRRRVIFVG-----------VPKNY-------- 176
Query: 573 NEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLR 632
EF I + N+ + S A++DLP D Y + +QK +R+
Sbjct: 177 -EFNFPIGDFTENK-------ITCSQAMNDLP---EESMTDGEPYPINPLSSYQKLMRIG 225
Query: 633 RHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVG 687
V Y+H+ + + + +P G N++DLP L G
Sbjct: 226 SDQV---------------YNHQITKHSQKTINTIAMVP--DGGNYKDLPKHLQG 263
>gi|119483468|ref|ZP_01618882.1| site-specific DNA-methyltransferase [Lyngbya sp. PCC 8106]
gi|119458235|gb|EAW39357.1| site-specific DNA-methyltransferase [Lyngbya sp. PCC 8106]
Length = 407
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 130/334 (38%), Gaps = 61/334 (18%)
Query: 447 DFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF- 505
+ I GGPPCQG F+ R + +D +N F+ +P +LMENV ++ K
Sbjct: 74 NVIIGGPPCQG---FSVCRQGRGDAKDPRNTLFQEFIRFGSIFEPDLMLMENVPNLAKIK 130
Query: 506 --SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
S + L+ + Y ++ A YG+PQ R R+F+ ++ K +P TH
Sbjct: 131 TKSDQAVIDIIKDELIKLGYHVDYSVLNATDYGIPQNRRRLFIVASK-VKITHPFPPSTH 189
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVART 623
I ++ + ++ PC L DAISDLP++ E ++ Y T
Sbjct: 190 TIASQSQLSFWENSLL-------PCPT-----LWDAISDLPILEAGEGAEKISYSKPPET 237
Query: 624 EFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPG 683
++QK +R LLY+H+ ER + G + D+P
Sbjct: 238 DYQKRLR---------------GNCKLLYNHKAMNHTKRMVERFSSM--SWGDSCSDVPD 280
Query: 684 VLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQ 743
L K D V ++ + L P ++P L N V
Sbjct: 281 HLR--PRKRNSDEIATLVYDQNNRRLHP-----------SRPCHTLPASFYANFV----- 322
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
HP +R T RE AR+Q FPD Y G
Sbjct: 323 -------HPYYNRNFTAREGARIQSFPDHYLFRG 349
>gi|346322860|gb|EGX92458.1| DNA methyltransferase Dim-2 [Cordyceps militaris CM01]
Length = 1182
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 75/151 (49%), Gaps = 23/151 (15%)
Query: 425 EKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGF--NRFRNPQAALEDIKNRQLLV- 481
+ + +G ++ +P G+VDFI GG PC G S +R +PQ KN+ L+
Sbjct: 747 DDFQRLAMQGQFADNVPRIGEVDFISGGSPCPGFSTMTNDRTTDPQR-----KNQSLVAA 801
Query: 482 FMDVIEYLKPKYVLMENVVDILK---------FSGGFLARYAVGRLVSMDYQTRLGIMAA 532
F ++ +PKY ++ENV+ I++ FS A LV M YQ RL + A
Sbjct: 802 FASCVDLYRPKYGILENVMGIIQSCRDRDQDVFSQLMCA------LVGMGYQARLFFLDA 855
Query: 533 GSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
S G Q R RVF+ A P LP+ PL TH
Sbjct: 856 LSCGSAQMRSRVFIVFAAPGWTLPEKPLQTH 886
>gi|258568064|ref|XP_002584776.1| predicted protein [Uncinocarpus reesii 1704]
gi|237906222|gb|EEP80623.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1033
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 154/355 (43%), Gaps = 68/355 (19%)
Query: 433 KGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALE-DIKNRQLLV-FMDVIEYLK 490
KG +S+++ G V+FI GG PCQG S NPQ E ++N ++ + +++ +
Sbjct: 648 KGDKSDLIAKLGQVEFISGGSPCQGYS----LANPQKWSEMSLRNSSMIASVVAYVDFYR 703
Query: 491 PKYVLMENVVDILKFSGGFLARYAVGRL----VSMDYQTRLGIMAAGSYGLPQFRLRVFL 546
P Y ++ENV + + R + +L V M YQ RL + A SYG PQ R R+FL
Sbjct: 704 PHYAILENVPAMASKTH---KRNPLSQLICAFVGMGYQLRLMHLDAWSYGAPQSRSRLFL 760
Query: 547 WGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLV 606
A P +LP +P TH ++ N + L +A + LP
Sbjct: 761 LIAAPGLELPDHPPLTH-----------------SHPKNTTLR-----SLGEAPNGLPF- 797
Query: 607 TNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYER 666
ER++ T +F + R D+ +L A++ S P DHR + +
Sbjct: 798 ------GERRWDTPI-FKFVSSLEGTR-DLPDLQRAKVRSIP--WPDHRSSRTEAHYTQA 847
Query: 667 VC-CIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKP 725
+ IPK A LP + + +DP P+ ++ +S++
Sbjct: 848 IIDQIPKYPRA--MGLPDAMA--KGYLNYDP-------------YPNEGLR-RKTASSRA 889
Query: 726 FGRLWWDEIVNTVVTRAQPHNRI---LLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ R+ ++ T+ T P + LH ++R+LT+ E R QG+PD L G
Sbjct: 890 WSRVNPHLLIPTITTNISPSCKFTGRWLHWRENRLLTVMEARRAQGYPDSEVLVG 944
>gi|448326112|ref|ZP_21515482.1| DNA-cytosine methyltransferase [Natronobacterium gregoryi SP2]
gi|445613246|gb|ELY66954.1| DNA-cytosine methyltransferase [Natronobacterium gregoryi SP2]
Length = 354
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 126/333 (37%), Gaps = 81/333 (24%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ GF+ +P + D +N F+ + L+PK L ENV I
Sbjct: 27 IDLVAGGPPCQ---GFSEVVSPDGS--DDRNHLFTNFISWVNELEPKAALFENVRGIQNT 81
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
+GG + Y ++ + +G+PQ R R+ R K + ++P E+
Sbjct: 82 AGGKFLEAVEKSFDLIGYDVTHRVINSSDFGVPQHRRRLVAIATR--KDVREHPFDGFEL 139
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
P + GV+ D I DLP V E E Y T RT
Sbjct: 140 --------------------NPVET-PGVM--DGIGDLPEVGPGEEITE--YDTEPRTLL 174
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
QK +R N S L H + D E + IP G N +P
Sbjct: 175 QKDLR-------NGSDE--------LSHHIAASHSQDMVEMISHIP--DGGNRTAIP--- 214
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQP 744
+ + SG H S + RL DE + + ++P
Sbjct: 215 -------------DELQPSSGY-----------HNS----YSRLKSDEPAVAITSNMSKP 246
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ +HP QDR LT RE ARLQ FPD Y+ G
Sbjct: 247 SSARCIHPFQDRGLTPREGARLQTFPDTYRFDG 279
>gi|67922668|ref|ZP_00516173.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
gi|67855516|gb|EAM50770.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
Length = 282
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 121/295 (41%), Gaps = 66/295 (22%)
Query: 407 YGPSEDTWEPIKGLSKCKEKLKEF-----VTKGYRSNIL---------PLPGDVDFICGG 452
YG + +E I G+ K+ L F ++G ++ + +D I GG
Sbjct: 21 YGFQQAGFEVIAGIDNWKDALATFQKNHPTSQGILMDLAVASSSKISQQINKSIDVIVGG 80
Query: 453 PPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLAR 512
PPCQG S + RNP +D +N F+ VI+Y +PK ++MENV +++ + G +
Sbjct: 81 PPCQGFSISGK-RNP----DDPRNLLYKSFLRVIDYFQPKAIVMENVPNMVSMAQGRIRE 135
Query: 513 YAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIP 572
+ L + YQ + I+ A YG+PQ R RV G +P +
Sbjct: 136 QILTDLGRLGYQVQYKILLASDYGVPQNRRRVIFVG-----------VPKNY-------- 176
Query: 573 NEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLR 632
EF I + N+ + S A++DLP D Y + +QK +R+
Sbjct: 177 -EFNFPIGDFTENK-------ITCSQAMNDLP---EESMTDGEPYPINPLSSYQKLMRIG 225
Query: 633 RHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVG 687
V Y+H+ + + + +P G N++DLP L G
Sbjct: 226 SDQV---------------YNHQITKHSQKTINTIAMVP--DGGNYKDLPKHLQG 263
>gi|294776807|ref|ZP_06742270.1| DNA (cytosine-5-)-methyltransferase [Bacteroides vulgatus PC510]
gi|294449283|gb|EFG17820.1| DNA (cytosine-5-)-methyltransferase [Bacteroides vulgatus PC510]
Length = 334
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 148/359 (41%), Gaps = 88/359 (24%)
Query: 435 YRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYV 494
Y+ + L G VD + GGPPCQG S + EDI+N + ++ I+ ++PK +
Sbjct: 5 YKIELKGLRGKVDLVAGGPPCQGFSMAGK-----RVEEDIRNNLVFSYIKFIDLVRPKII 59
Query: 495 LMENVVDILKFSGGF----------LARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRV 544
L ENV F+ F ++ + L + Y + I+ +G+PQ R R
Sbjct: 60 LFENVKG---FTYAFDKKKNEEAIPYSQKVIDGLKMLGYNVKSNIIDFSKFGIPQRRNRF 116
Query: 545 FLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANN--QPCQLEKGVLLSDAISD 602
L G + K L P++F+E++ ++ N + L L +AISD
Sbjct: 117 ILIGIQ--KSLGS--------------PDQFEEMLESHKNKFLKSKGLTTSTTLKEAISD 160
Query: 603 LPLVTNNE--SEDERKYGT----VARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRP 656
L L +N E + D + + + +++QK +R ++ N+ + ++ S
Sbjct: 161 L-LQSNGEIPTPDRKGFKSGIYGAEESDYQKLLRTDYAEIHNIPDSHSFAKHS------- 212
Query: 657 FQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMK 716
E++ C K+ AN + G + D + +W+ + +
Sbjct: 213 -------SEKLECF-KKLLANC-GVRGKRIDGDERKKWNIKQRSITI------------- 250
Query: 717 FEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
L D I T+ H LH + R++T+RE AR+Q FPD Y++
Sbjct: 251 ------------LDADSISPTITG----HPDDYLHYCEPRIMTVRECARIQSFPDWYEI 293
>gi|429190201|ref|YP_007175879.1| DNA-methyltransferase Dcm [Natronobacterium gregoryi SP2]
gi|429134419|gb|AFZ71430.1| DNA-methyltransferase Dcm [Natronobacterium gregoryi SP2]
Length = 403
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 126/333 (37%), Gaps = 81/333 (24%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQ GF+ +P + D +N F+ + L+PK L ENV I
Sbjct: 76 IDLVAGGPPCQ---GFSEVVSPDGS--DDRNHLFTNFISWVNELEPKAALFENVRGIQNT 130
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
+GG + Y ++ + +G+PQ R R+ R K + ++P E+
Sbjct: 131 AGGKFLEAVEKSFDLIGYDVTHRVINSSDFGVPQHRRRLVAIATR--KDVREHPFDGFEL 188
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
P + GV+ D I DLP V E E Y T RT
Sbjct: 189 --------------------NPVET-PGVM--DGIGDLPEVGPGEEITE--YDTEPRTLL 223
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
QK +R N S L H + D E + IP G N +P L
Sbjct: 224 QKDLR-------NGSDE--------LSHHIAASHSQDMVEMISHIP--DGGNRTAIPDEL 266
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDE-IVNTVVTRAQP 744
PS SG H S + RL DE V ++P
Sbjct: 267 ---------QPS-------SGY-----------HNS----YSRLKSDEPAVAITSNMSKP 295
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ +HP QDR LT RE ARLQ FPD Y+ G
Sbjct: 296 SSARCIHPFQDRGLTPREGARLQTFPDTYRFDG 328
>gi|330991509|ref|ZP_08315460.1| Modification methylase DdeI [Gluconacetobacter sp. SXCC-1]
gi|329761528|gb|EGG78021.1| Modification methylase DdeI [Gluconacetobacter sp. SXCC-1]
Length = 449
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 148/376 (39%), Gaps = 111/376 (29%)
Query: 431 VTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLK 490
+ Y S + + G VD + GGPPCQG S R R+P +D ++R + ++D++ ++
Sbjct: 97 LAANYTSQLAAMAGSVDLLAGGPPCQGFSTNGR-RDP----DDPRSRMVEAYLDIVALVR 151
Query: 491 PKYVLMENVVDILKF---SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFR------ 541
P+ VL+ENV GG A RL S+ Y + ++ A S+G+PQ R
Sbjct: 152 PRLVLLENVRGFQSMPHAGGGTYATATRERLSSLGYDSWADVLIASSWGVPQRRPRYICI 211
Query: 542 --LRVFLWGARPFKKLPQYPLPTHEIVA-RGVIPNEFQEIIVAYANNQPCQLEKGVLLSD 598
LR G P ++L E +A RG+ P E ++D
Sbjct: 212 AALRGSFPGINPLERLKTG---RREFLARRGLGPGETS-------------------VAD 249
Query: 599 AISDLPLVTNNESEDER----KYGTVAR------TEFQKYIRLRRHDVVNLSSAQMASRP 648
A+SDL +V N S D + Y + R T +Q+ +RRH + S ++A
Sbjct: 250 ALSDL-IVDPNVSRDTKWEAPGYPGIMRVDPESPTAYQQL--MRRHSMHQPSDRRLARHN 306
Query: 649 SLLYDHRPFQVNN------DDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVM 702
QV N + ER CI + +R+
Sbjct: 307 Q--------QVTNRMKRILESCERGRCISQ-------------------------ADRLR 333
Query: 703 LKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRE 762
L GK ST P V T+ P + L+H R +++RE
Sbjct: 334 LGIGK-------------RSTTPLSARLPAPTVTTL-----PDD--LIHYRDPRTMSVRE 373
Query: 763 NARLQGFPDCYQLFGP 778
AR+Q FPD + GP
Sbjct: 374 LARIQSFPDWFSFKGP 389
>gi|192292294|ref|YP_001992899.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris TIE-1]
gi|192286043|gb|ACF02424.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris TIE-1]
Length = 500
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 171/436 (39%), Gaps = 65/436 (14%)
Query: 382 LIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILP 441
++A DP+ K G+ F + S EP S L + + G+ S
Sbjct: 43 IVAAVEHDPDAAKSHGLNF------HAGSPVHMEPRDISSTPPANLTKALGLGHHSLAF- 95
Query: 442 LPGDVDFICGGPPCQGVSGFNRFR------NPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
D + GGPPCQ + R + +P+A D + R + ++D +E P VL
Sbjct: 96 -----DVVIGGPPCQAFARVGRSKLREVADHPEAFRHDPRARLYIEYLDYVEECAPLAVL 150
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP-FKK 554
MENV D+L G +A L S Y+ ++ A YG+PQ R R+FL R ++
Sbjct: 151 MENVPDVLNHGGHNIAEEISEVLESRGYRCGYTLLNAARYGVPQMRERMFLIAYRKELQQ 210
Query: 555 LPQYPLPTHEI-----------VARGVIPNEFQEIIVAY--ANNQPCQLEKGVLLSDAIS 601
++P PTH + VA ++ + Y A + L+ V AI
Sbjct: 211 TVEFPKPTHWVDLPAGYEGSRAVALKLLSRDLFSESGHYVPAPDAGRNLKPAVTAKQAIG 270
Query: 602 DLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSL-----LYDH-- 654
DLP + + + AR F I R ++ + +M S P LYDH
Sbjct: 271 DLPTIYARKLLADGLLTRGAR-RFNVPIAFNRPRSISRYAEEMRSWPGFPAKAALYDHVI 329
Query: 655 ----RPFQV-----NNDDYERVC-CIPKRKGANFRDLPGVLVGPDN-KVRWDPSMERVML 703
R +++ D Y + C K L P++ W+ + ++
Sbjct: 330 RYLPRDYELFSRLRPGDQYPQAYQCALKMFEEKLAQLRKKKAAPESGTAAWNRLRDSIV- 388
Query: 704 KSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR--AQPHNRILLHPSQDRVLTIR 761
P PD KF ++ + ++ D T++ ++ I Q R +++R
Sbjct: 389 ---PPYDPD---KFPNK-----WRKMEEDWPARTLMAHLGKDSYSHIHYDSDQARTISVR 437
Query: 762 ENARLQGFPDCYQLFG 777
E ARLQ FPD + G
Sbjct: 438 EAARLQSFPDGFVFSG 453
>gi|428211715|ref|YP_007084859.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
gi|428000096|gb|AFY80939.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
Length = 434
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
++D +CGGPPCQG S + AL+D +N + F+ ++ L+PKY +MENV +
Sbjct: 76 EIDVVCGGPPCQGFSLMGK-----RALDDPRNSLVFHFIRIVTELQPKYFVMENVRGLTI 130
Query: 505 FSGGFLARYAVGRLVSMDYQ--TRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLP 561
L + + YQ T ++ + YG+PQ R R+FL G R LP YP P
Sbjct: 131 GPHKQLLDEVIDKFHDSGYQVLTPYQVLNSAHYGVPQNRERLFLIGCREGLSLPDYPTP 189
>gi|325678040|ref|ZP_08157677.1| putative modification methylase BspRI [Ruminococcus albus 8]
gi|324110257|gb|EGC04436.1| putative modification methylase BspRI [Ruminococcus albus 8]
Length = 358
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 130/337 (38%), Gaps = 84/337 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+VD I GGPPCQG S + + ++D +N F+ ++ ++PK +MENV ++K
Sbjct: 70 EVDVIIGGPPCQGFS-----LSGKRMIDDPRNILYKSFVRMVSDIQPKIFVMENVPGLVK 124
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR--PFKKLPQYPLPT 562
G + + ++ Y+ LG + A YG+PQ R RVF G K ++ PT
Sbjct: 125 LFKGKVKDQVIEDFSNLGYEVTLGQLTACDYGVPQARKRVFFVGVNKSKIKHTEKFVFPT 184
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER-KYGTVA 621
P +I AY V DAISDL + + E Y A
Sbjct: 185 ---------PTHGDKI--AY-----------VTCKDAISDLDFIGDTTLLQEHDAYQISA 222
Query: 622 RTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDL 681
+ E+Q +R +++N + + + + +P G N++ L
Sbjct: 223 QNEYQVMMRKNAKELLNHVTTIHTEKTRSI---------------IALVP--DGGNYKSL 265
Query: 682 PGVLVGPDN-KVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVT 740
P L + W + S KP T+ T
Sbjct: 266 PEELQQTRKVNIAW------TRMDSQKPCF--------------------------TIDT 293
Query: 741 RAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
H H +RV T+RE+AR+Q FPD ++ G
Sbjct: 294 GHNHH----FHYRANRVPTVRESARIQSFPDDFEFIG 326
>gi|113474395|ref|YP_720456.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
gi|110165443|gb|ABG49983.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
Length = 421
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 7/117 (5%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
++D I GGPPCQG S + AL+D +N + F+ ++ LKPKY ++ENV +
Sbjct: 73 EIDVIFGGPPCQGFSQIGK-----RALDDPRNALISHFLRIVLELKPKYFVIENVKGLTV 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRL--GIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ +L YQ +L ++ A +YG+PQ R R+F+ G + KLP YP
Sbjct: 128 GKHQIFLEEVINKLSKNSYQLQLPYQVLNAANYGVPQHRERLFILGCKKGLKLPNYP 184
>gi|157164649|ref|YP_001466261.1| two-component sensor [Campylobacter concisus 13826]
gi|112801493|gb|EAT98837.1| modification methylase HphIA (Cytosine-specificmethyltransferase
HphIA) (M.HphIA) (M.Hphi(C)) [Campylobacter concisus
13826]
Length = 489
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 147/338 (43%), Gaps = 66/338 (19%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VD I GGPPCQ S N+ Q ++D +N F+ + LKPK+++MENV +LK
Sbjct: 185 VDMIIGGPPCQSFSSANQ----QRVIDDPRNVLYKYFVKFVNDLKPKFIIMENVRGMLK- 239
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYPLPTHE 564
+A V + Y + + A ++ +PQ R+R+ G + + K ++ L +
Sbjct: 240 ----VANQVVEDFDKIGYTAKYRLYDATNFSVPQKRIRLIYIGINKEYSK--KHNLDVDK 293
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVT----NNESEDERKYGTV 620
I++ I NE ++ K +L DA+ ++ + N++E + + G
Sbjct: 294 IMSD--IENETKK-------------NKKFILKDALDNIENLVCPSKQNQTESDDESG-- 336
Query: 621 ARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRD 680
++ KY + L+ + SL Y+H+ A F++
Sbjct: 337 SKISINKY-----KNNEYLNLINNNNIYSLTYNHK--------------------ARFQN 371
Query: 681 LPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVT 740
+ + K D + E + K ++P Y+ + H K F +L +E T+
Sbjct: 372 ETNLKIYSLLKQGEDSTTETI-----KDIMP-YSHR-NHIFKDKYF-KLVENEPSRTITA 423
Query: 741 RAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGP 778
+ +HP+Q R +T RE AR+Q FPD Y FGP
Sbjct: 424 HLKMDCHSHIHPAQIRAITPREAARIQSFPDNYLFFGP 461
>gi|119493084|ref|ZP_01624009.1| C-5 cytosine-specific DNA methylase [Lyngbya sp. PCC 8106]
gi|119452829|gb|EAW34004.1| C-5 cytosine-specific DNA methylase [Lyngbya sp. PCC 8106]
Length = 441
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 136/341 (39%), Gaps = 74/341 (21%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
D+D + GGPPCQG S + LED +N + F+ ++ LKPK+ + ENV +
Sbjct: 83 DIDVVFGGPPCQGFSLMGK-----RLLEDPRNLLVFHFVRIVAELKPKFFVFENVKGMAS 137
Query: 505 FSGGFLARYAVGRLVSMDYQTR--LGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
+ + + YQ + ++ A YG+PQ R R+FL G R LP YP PT
Sbjct: 138 GKHQNFIQELINKFEYYGYQVQQPYQVLNAAYYGVPQKRERLFLLGCREDLALPNYPEPT 197
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVAR 622
+ + ++ Y++ P + +A+ DLP + N ++ + V
Sbjct: 198 FQ--------PPYSQVAKRYSHLPPTP-----TVREALQDLPKIENYPELTQQDWADVCF 244
Query: 623 TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLP 682
+ Y ++ R N VN+ Y R N R L
Sbjct: 245 DKPSFYGKILRGIAKN--------------------VNDYSYPR--------QYNSRRL- 275
Query: 683 GVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKP---FGRLWWDEIVNTV- 738
+ +R + S+E + + P T+P F +L D + NT+
Sbjct: 276 ------TSSLRTEHSIESIERFAATP-----------PGKTEPISRFHKLDPDGLCNTLR 318
Query: 739 ----VTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
+R + +HP R +T+RE ARL +PD ++
Sbjct: 319 AGTPSSRGAYTSPRPIHPFIPRCITVREAARLHSYPDWFRF 359
>gi|226293429|gb|EEH48849.1| DNA methyltransferase Dim-2 [Paracoccidioides brasiliensis Pb18]
Length = 1311
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 76/144 (52%), Gaps = 5/144 (3%)
Query: 427 LKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVI 486
L+ F K +N++ GDV+FI G PCQG S N + + ++ + + + +
Sbjct: 795 LRAFQGKSEDNNLVAKLGDVEFISAGSPCQGYSSVNSCKENEVSMRN--SSMIASVASYV 852
Query: 487 EYLKPKYVLMENVVDILKFSG--GFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRV 544
++ +PKY ++ENV+ + S L + V M YQ R+ + A S+G PQ R R+
Sbjct: 853 DFFRPKYAILENVIMMSNRSNKKNPLCQLLCA-FVGMGYQLRILNLDAWSFGAPQSRSRL 911
Query: 545 FLWGARPFKKLPQYPLPTHEIVAR 568
F++ A P +LP +P TH +++
Sbjct: 912 FIFIAVPGLQLPAHPPLTHSHLSK 935
>gi|418967793|ref|ZP_13519431.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis SK616]
gi|383342252|gb|EID20480.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis SK616]
Length = 393
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 140/353 (39%), Gaps = 90/353 (25%)
Query: 442 LPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVD 501
L G VD + GGPPCQG S + +N +DI+N+ + +++ I+ ++P + ENV
Sbjct: 76 LNGSVDLVVGGPPCQGFSMAGKRKN-----DDIRNQLMHSYIEFIKLVQPTMLFFENVQG 130
Query: 502 ILKFSGGF--------LARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFK 553
F+ GF + V L + Y I+ YG+PQ R R L+ ++
Sbjct: 131 ---FTVGFKDHKDKQKYSDILVSELRELGYNLDYKIVTMSEYGVPQNRKRFILFASK--- 184
Query: 554 KLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQL-EKG----VLLSDAISDLPLVTN 608
G F E++ N+ C L ++G + +S AI+DL
Sbjct: 185 --------------NGAYEIFFDELL----KNKDCFLRDRGLKIPITISQAINDLKKSHG 226
Query: 609 N-ESEDERKY--GTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
+S+D + + G R Y +L R+++ R + HR
Sbjct: 227 EVDSKDTKAFKNGKYGRAT-SAYQKLMRNNI---------ERGAFPDSHR---------- 266
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKP 725
K K ++ + +R PSM V + + P
Sbjct: 267 ----FAKHKSETIDLFKRLMTASEKSIRITPSMNLVEGLKKRGVTP-------------- 308
Query: 726 FGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGP 778
L + I NT+ + + +H + R++T+RE+AR+Q FPD Y+ GP
Sbjct: 309 ---LKKNSICNTITSIPDDY----IHYDEPRIMTVREHARIQSFPDDYEFKGP 354
>gi|333024773|ref|ZP_08452837.1| putative DNA-cytosine methyltransferase [Streptomyces sp. Tu6071]
gi|332744625|gb|EGJ75066.1| putative DNA-cytosine methyltransferase [Streptomyces sp. Tu6071]
Length = 386
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 135/341 (39%), Gaps = 63/341 (18%)
Query: 446 VDFICGGPPCQGVSGFNR--FRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
VD I GGPPCQG SG NR + ED +N+ ++ ++ +KPK ++ENV L
Sbjct: 68 VDVIMGGPPCQGFSGLNRDDLKKKPPKSEDPRNKLWREYVRAVQVIKPKIFVIENVDRFL 127
Query: 504 K---FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP-QYP 559
+ ++ A A G L DY ++ A YG+PQ R R + R P ++P
Sbjct: 128 RSPEYAALCAATEADGPLA--DYHLTEKVLNAADYGVPQARRRAIVIATRRDLGEPLRHP 185
Query: 560 LPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGT 619
+P+H R F+E + E L DLPL T GT
Sbjct: 186 IPSHR---RATDQLTFEEGRAPWLGVWDAVFEH-TLRVRLKEDLPLRTGA------PLGT 235
Query: 620 VARTEFQ-KYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANF 678
F K + +RR + LS A+ A+ P G N
Sbjct: 236 DLPGAFSGKELHIRR-NPTPLSLARYAAIPP-------------------------GGNR 269
Query: 679 RDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQS-STKPFGRLWWDEIVNT 737
DL +R + +G P+ H S S GRL D T
Sbjct: 270 YDL----------------TDRTSVINGVPVYLSTESWDNHTSGSGDVMGRLHKDRPSVT 313
Query: 738 VVTR-AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ T +P LHP++DR +T E A +QGFPD ++ +G
Sbjct: 314 IRTEFYKPEKGRYLHPTKDRPITHWEAALIQGFPDTFKWYG 354
>gi|407928299|gb|EKG21159.1| hypothetical protein MPH_01515 [Macrophomina phaseolina MS6]
Length = 1010
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 143/354 (40%), Gaps = 71/354 (20%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
G +DFI G PCQG S R ++ +++L +I + I++ +PKY L+ENVV +
Sbjct: 589 GSIDFIAAGSPCQGFSVLQRDKSSESSLRNIS--MIASVAAFIDFYRPKYALLENVVAMA 646
Query: 504 KFSGGFLARYA--VGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLP 561
L + + LV + YQ + A S+G PQ R R+F+
Sbjct: 647 HRGREQLGIFPQLLCTLVGLGYQVSQHYLDAWSFGDPQRRSRLFV--------------- 691
Query: 562 THEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVA 621
I A G+ P I ++ P A++ + NN ER++G
Sbjct: 692 --AIAAPGLTPMPPPTITHSHPRGTP-----------AVALGRNLANNLRFGERRFGP-- 736
Query: 622 RTEFQKYIRLRRH-----DVVNLSSAQMASRPSLLYDHRPFQVNNDDYER-----VCCIP 671
T F+ YI + + DV + S P DHR N + R + P
Sbjct: 737 -TPFE-YISVEQSMGDLPDVGDSHSQTCIPYP----DHRTV-ANEAAWVREMMRHIPIYP 789
Query: 672 KRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWW 731
+GA L V+ GP + L SG A+K + ++ + R+
Sbjct: 790 SGQGAMRAILDQVMPGP---------LADRYLTSGS------ALKIS--AGSQSWSRVCG 832
Query: 732 DEIVNTVVTRAQPHNRI---LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
D + NT+ T I +LH Q R LTIRE R QGF D + G KE+
Sbjct: 833 DGLTNTITTAPVASCAINGRVLHWRQHRALTIREARRAQGFDDGDVITGTSKEQ 886
>gi|448332895|ref|ZP_21522115.1| DNA-cytosine methyltransferase [Natrinema pellirubrum DSM 15624]
gi|445624739|gb|ELY78114.1| DNA-cytosine methyltransferase [Natrinema pellirubrum DSM 15624]
Length = 432
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 143/370 (38%), Gaps = 78/370 (21%)
Query: 443 PGDVDFICGGPPCQGVS--GFNRFRNPQAALEDIKNRQLLV--FMDVIEYLKPKYVLMEN 498
PG++D I GGPPC S G ++ R+ + +R L F+ +E L P+ LMEN
Sbjct: 72 PGELDLIAGGPPCPTFSMIGRSKIRSLDDKSPESDDRHQLYEDFLRFVESLSPRAFLMEN 131
Query: 499 VVDILKFSGG---FLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFK-- 553
V +L +G + ++ + Y + + A ++G+PQ R R+F G R
Sbjct: 132 VTGMLSSTGANGDSIVDIICNQMEELGYTVDVQKVDAANFGVPQHRTRLFFIGQREDTDR 191
Query: 554 --------------------KLPQYPLPTHE-----IVARGVIPNEFQEIIVAYANNQPC 588
KL P H+ I GV EF+ P
Sbjct: 192 IDLENWETHREPKNEKERNMKLRTEPDAFHDTTQSTITDFGVEIEEFEHDF----QEHPA 247
Query: 589 QLEKGVLLSDAISDLPLVTNNES---EDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMA 645
+ + V ++DAI DLP ++ + ++ Y A T +Q++ R D+ + + A
Sbjct: 248 EKQPYVTVADAIMDLPPLSPSGGMPPKESTDYTVPALTRYQEWAR----DLPEGTDWKDA 303
Query: 646 SRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKS 705
+ L +H N D + + G N D+ L P + + S
Sbjct: 304 N----LTNHSSRGHNLKDLTLYKILGEGVGWNIGDVASTL---------QPYRDDIFTDS 350
Query: 706 GKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENAR 765
K P +E +T+V Q + +HP + R L++RE AR
Sbjct: 351 YKKQHP--------------------NEPASTIVAHLQKDGHMFIHPREARSLSVREAAR 390
Query: 766 LQGFPDCYQL 775
LQ F D ++
Sbjct: 391 LQSFRDSFEF 400
>gi|225684039|gb|EEH22323.1| DNA methyltransferase Dim-2 [Paracoccidioides brasiliensis Pb03]
Length = 1336
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 76/144 (52%), Gaps = 5/144 (3%)
Query: 427 LKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVI 486
L+ F K +N++ GDV+FI G PCQG S N + + ++ + + + +
Sbjct: 820 LRAFQGKSEDNNLVAKLGDVEFISAGSPCQGYSSVNSCKENEVSMRN--SSMIASVASYV 877
Query: 487 EYLKPKYVLMENVVDILKFSG--GFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRV 544
++ +PKY ++ENV+ + S L + V M YQ R+ + A S+G PQ R R+
Sbjct: 878 DFFRPKYAILENVIMMSNRSNKKNPLCQLLCA-FVGMGYQLRILNLDAWSFGAPQSRSRL 936
Query: 545 FLWGARPFKKLPQYPLPTHEIVAR 568
F++ A P +LP +P TH +++
Sbjct: 937 FIFIAVPGLQLPAHPPLTHSHLSK 960
>gi|433591427|ref|YP_007280923.1| DNA-methyltransferase Dcm [Natrinema pellirubrum DSM 15624]
gi|433306207|gb|AGB32019.1| DNA-methyltransferase Dcm [Natrinema pellirubrum DSM 15624]
Length = 438
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 143/370 (38%), Gaps = 78/370 (21%)
Query: 443 PGDVDFICGGPPCQGVS--GFNRFRNPQAALEDIKNRQLLV--FMDVIEYLKPKYVLMEN 498
PG++D I GGPPC S G ++ R+ + +R L F+ +E L P+ LMEN
Sbjct: 78 PGELDLIAGGPPCPTFSMIGRSKIRSLDDKSPESDDRHQLYEDFLRFVESLSPRAFLMEN 137
Query: 499 VVDILKFSGG---FLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFK-- 553
V +L +G + ++ + Y + + A ++G+PQ R R+F G R
Sbjct: 138 VTGMLSSTGANGDSIVDIICNQMEELGYTVDVQKVDAANFGVPQHRTRLFFIGQREDTDR 197
Query: 554 --------------------KLPQYPLPTHE-----IVARGVIPNEFQEIIVAYANNQPC 588
KL P H+ I GV EF+ P
Sbjct: 198 IDLENWETHREPKNEKERNMKLRTEPDAFHDTTQSTITDFGVEIEEFEHDF----QEHPA 253
Query: 589 QLEKGVLLSDAISDLPLVTNNES---EDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMA 645
+ + V ++DAI DLP ++ + ++ Y A T +Q++ R D+ + + A
Sbjct: 254 EKQPYVTVADAIMDLPPLSPSGGMPPKESTDYTVPALTRYQEWAR----DLPEGTDWKDA 309
Query: 646 SRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKS 705
+ L +H N D + + G N D+ L P + + S
Sbjct: 310 N----LTNHSSRGHNLKDLTLYKILGEGVGWNIGDVASTL---------QPYRDDIFTDS 356
Query: 706 GKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENAR 765
K P +E +T+V Q + +HP + R L++RE AR
Sbjct: 357 YKKQHP--------------------NEPASTIVAHLQKDGHMFIHPREARSLSVREAAR 396
Query: 766 LQGFPDCYQL 775
LQ F D ++
Sbjct: 397 LQSFRDSFEF 406
>gi|327308782|ref|XP_003239082.1| hypothetical protein TERG_01066 [Trichophyton rubrum CBS 118892]
gi|326459338|gb|EGD84791.1| hypothetical protein TERG_01066 [Trichophyton rubrum CBS 118892]
Length = 1079
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 148/351 (42%), Gaps = 76/351 (21%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
GD FI G PCQG S N +++ + ++ + + + I+ +P+Y ++ENV
Sbjct: 701 GDAHFISAGSPCQGYSSANAYKDNEVSMRN--SSMIASVASYIDLYRPQYAILENVT--- 755
Query: 504 KFSGGFLARYAVGR--------LVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
G +R V V M YQ R+ + A S+G PQ R R+F+ P +
Sbjct: 756 ----GMASRTHVQNPLSQLLCTFVGMGYQARVFNLDAWSFGAPQSRSRLFIAITAPGLHV 811
Query: 556 PQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
++P TH + P + S A+ D P N + ER
Sbjct: 812 LEHPALTH---------------------SHPPGTK-----SRALGDNP---NGSTFGER 842
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVC-CIPKRK 674
++ T EF D+ ++ +A++ S P DHRP +V +++ + + IPK
Sbjct: 843 RWDTPV-FEFVS-AHSATQDLPSIDTARIMSIP--WPDHRPSRVESEEKQTLIQNIPKYP 898
Query: 675 GANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEI 734
A L+G + DP +K+ +++K + R+ +++
Sbjct: 899 RAQ------GLIGAIARGWVDPLEHSARMKA---------------ATSKAWSRIHPEKL 937
Query: 735 VNTVVTRAQP---HNRILLHPSQDRVLTIRENARLQGFPDCYQLFG-PVKE 781
TV T P LH +DR++T++E R QG+PD L G PV++
Sbjct: 938 FPTVTTGVCPFCIFTGSWLHWQEDRLVTVQEVRRAQGYPDNEVLIGSPVQQ 988
>gi|227112465|ref|ZP_03826121.1| putative C-5 cytosine-specific DNA methylase [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 390
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 147/373 (39%), Gaps = 79/373 (21%)
Query: 422 KCKEKLKEFVTKGYRSNILPLP---------GDVDFICGGPPCQGVSGFNRFRNPQAALE 472
K K +L+ KG +NI PL G++D I GGPPCQG F+ R A ++
Sbjct: 49 KRKIELRSGPQKGDINNITPLELRQSLELERGELDIILGGPPCQG---FSTHRIKNAGVD 105
Query: 473 DIKNRQLLVFMDVIEYLKPKYVLMENVVDIL-KFSGGFLARYAVGRLVSMDYQTRLG-IM 530
D +N LL + + + +PK L+ENV +L K + ++ + + Y + I+
Sbjct: 106 DPRNALLLKYFEFVHEFQPKAFLVENVTGLLWKRHEKYFHQF-IDLAQNSHYTLKFSNII 164
Query: 531 AAGSYGLPQFRLRVFLWGAR-----PFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANN 585
A YG+PQ R RVF++G K P P PTH GV P
Sbjct: 165 NAVDYGVPQNRKRVFIFGIHEDLNNSTIKFP--PKPTHHSPNSGVEP------------- 209
Query: 586 QPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMA 645
+ S D+P DE G +E + Y L NL +
Sbjct: 210 ------FWIPASSVFEDIPSNIKKRYIDEYFVGKFNLSEEEGYNILN-----NLPIGEPV 258
Query: 646 SRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKS 705
S + + P V ER F D P N R D + E+ +LK
Sbjct: 259 SENEIFMNPTPKLV-----ER-----------FMDT------PLNGSRVD-AGEKHLLKC 295
Query: 706 GKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QPHNRILLHPSQDRVLTIRENA 764
++ +E +GR+ NT+ T P +HP ++ +T+R A
Sbjct: 296 -------HSNGYEGHKDV--YGRIMIHRPSNTITTGCNNPSKGRFVHPWKNHGITLRHAA 346
Query: 765 RLQGFPDCYQLFG 777
RLQ FPD ++ G
Sbjct: 347 RLQTFPDWFEFTG 359
>gi|385266921|ref|ZP_10045008.1| DNA (cytosine-5-)-methyltransferase [Bacillus sp. 5B6]
gi|385151417|gb|EIF15354.1| DNA (cytosine-5-)-methyltransferase [Bacillus sp. 5B6]
Length = 377
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 120/334 (35%), Gaps = 84/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VD + GGPPCQG S + D +N L + + KPK L+ENV I
Sbjct: 75 VDIVIGGPPCQGFS-----LTGSRDINDTRNTLYLAVVKAVRRFKPKAFLIENVPGIATL 129
Query: 506 SGGFLARYAVGRLVSMDYQTRLGI--MAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
G + + + M Y + + A YG+PQ R R+F G ++P PTH
Sbjct: 130 YNGIVKQQIINTFEDMGYNVSVSPKPLLAADYGVPQMRKRMFFVGIEKGYGSFEFPEPTH 189
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVART 623
E+ V S+AISDLP E+ Y ++
Sbjct: 190 -------------------------TPERYVTCSEAISDLPSRDEEFGEEVDNYEKKPQS 224
Query: 624 EFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPG 683
+Q+++R + H N+ ++ + +G N +DLP
Sbjct: 225 LYQEFMRQNSKKL-----------------HNHVATNHTEHVKWVISQVPEGGNHKDLP- 266
Query: 684 VLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQ 743
G + +++ + R S KP T+ T +
Sbjct: 267 --PGIGDSRKFNEAWTRY-------------------HSKKP---------SRTIDTGHR 296
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
H H +RV T+RENARLQ F D + G
Sbjct: 297 NH----FHYKYNRVPTVRENARLQSFRDDFVFIG 326
>gi|449106429|ref|ZP_21743095.1| DNA (cytosine-5-)-methyltransferase [Treponema denticola ASLM]
gi|449117489|ref|ZP_21753906.1| DNA (cytosine-5-)-methyltransferase [Treponema denticola H-22]
gi|451968138|ref|ZP_21921367.1| DNA (cytosine-5-)-methyltransferase [Treponema denticola US-Trep]
gi|448950690|gb|EMB31511.1| DNA (cytosine-5-)-methyltransferase [Treponema denticola H-22]
gi|448964942|gb|EMB45608.1| DNA (cytosine-5-)-methyltransferase [Treponema denticola ASLM]
gi|451703095|gb|EMD57477.1| DNA (cytosine-5-)-methyltransferase [Treponema denticola US-Trep]
Length = 413
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 150/369 (40%), Gaps = 100/369 (27%)
Query: 431 VTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLK 490
+ K Y++ + G +D + GGPPCQG S + ED++N + +++ I+ ++
Sbjct: 71 ILKNYKNQLNEFRGKIDLVVGGPPCQGFSTAGK-----RVKEDVRNNLVFSYIEFIKLIE 125
Query: 491 PKYVLMENVVDILKFSGGF----------LARYAVGRLVSMDYQTRLGIMAAGSYGLPQF 540
PK +L ENV F+ F ++ + L+ ++Y+ I+ YG+PQ
Sbjct: 126 PKMILFENVKG---FTYAFEKKIDEASIPYSKKVIDALIDLNYKIEAYIIDFSEYGIPQR 182
Query: 541 RLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKG----VLL 596
R R L G++ K + F+E++ + L+KG + +
Sbjct: 183 RNRFILIGSKAIKN----------------TQSNFKELL--ESKKSEFLLKKGIPANITV 224
Query: 597 SDAISDLPLVTNNE--SEDER-----KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPS 649
+AISDL L +N + + D + KYG V + +QK +R N+ + ++ S
Sbjct: 225 KEAISDL-LRSNGQIPTPDRKGFMSGKYGKV-ESGYQKLLRGNYAQEHNIPDSHSFAKHS 282
Query: 650 LLYDH---RPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSG 706
LL + + N +RV I K K N + ++ P+ S
Sbjct: 283 LLKEECFKKLLNSNQHRGKRVDEIIKSK-LNIKQRSLTILDPN---------------SA 326
Query: 707 KPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARL 766
P + + + LH S+ R++T+RE AR+
Sbjct: 327 SPTITSHPDDY--------------------------------LHYSEPRIMTVRECARI 354
Query: 767 QGFPDCYQL 775
Q FPD Y++
Sbjct: 355 QSFPDWYEI 363
>gi|417751299|ref|ZP_12399616.1| putative modification methylase BspRI [Streptococcus dysgalactiae
subsp. equisimilis SK1249]
gi|333772922|gb|EGL49718.1| putative modification methylase BspRI [Streptococcus dysgalactiae
subsp. equisimilis SK1249]
Length = 366
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 142/341 (41%), Gaps = 81/341 (23%)
Query: 449 ICGGPPCQGVSGFNRFRNPQAALEDIK-NRQLLV--FMDVIEYLKPKYVLMENVVDILKF 505
+ GGPPCQ S + D+ NR LV ++++I +++P+Y + ENVV LK
Sbjct: 67 VIGGPPCQSFSLVGK--------RDVHDNRSDLVWRYLEIINHVQPEYFVFENVVG-LKS 117
Query: 506 SGGFLARYAVGRLVS----MDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLP 561
+ + L S + Y + + A YG+PQ R RV + G+R + +P P
Sbjct: 118 AKTPKGTKVIEDLASAFERIGYTINIETLNAADYGVPQRRKRVIIVGSRYGLRF-NFPKP 176
Query: 562 THEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVA 621
TH NE + L K V +AI DL T + KY T
Sbjct: 177 TH---------NE----------DGSLGLSKWVSAQEAIGDLGEAT---VDGITKYCTAI 214
Query: 622 RTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDL 681
+Q+ +R + +L S P Q+++ D + + + + G N+ D+
Sbjct: 215 ENSYQELMREK-----SLESVSQHYYP---------QMSDLDKQIISFV--KPGGNYMDV 258
Query: 682 PGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKF-EHQSSTKPFGRLWWDEIVNTVVT 740
P + P N+++ KF E T +GRL + T+ T
Sbjct: 259 PDFV--PSNRIK----------------------KFKETGGRTTCYGRLLPSKPAYTINT 294
Query: 741 R-AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVK 780
+P+ +H QDR++T+RE R Q FPD Y++ K
Sbjct: 295 HFNRPNVGCNIHYKQDRLITVREALRFQSFPDTYKIISKTK 335
>gi|309789600|ref|ZP_07684181.1| BsaWI methylase [Oscillochloris trichoides DG-6]
gi|308228336|gb|EFO81983.1| BsaWI methylase [Oscillochloris trichoides DG6]
Length = 436
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 139/345 (40%), Gaps = 65/345 (18%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEY---LKPKYVLMENVVDI 502
VD + GGPPC+ F + ++ + ++F ++I LK KY+L+EN+ +
Sbjct: 86 VDLVAGGPPCE------TFSTAGPGIRKNRDYRDMLFQELIRIACVLKAKYILIENIPGL 139
Query: 503 LKFSG-----GFLARYAVGRLVSMDY-QTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP 556
G ++ + L Y + ++ A +YG+PQFR R+F+
Sbjct: 140 QTKKGPNGEKAWIFNEILKLLHDSGYVYYKWAVLNAANYGVPQFRERLFIIATSDSSLPI 199
Query: 557 QYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERK 616
+P PTH Y P + DAI DLP + N E++
Sbjct: 200 IFPTPTH-----------------GYTKLLPWN-----TVEDAIGDLPPLDN--GEEKNF 235
Query: 617 YGTVARTEFQKYIRLRR--HDVVNLSSAQMASRPSLLYD-HRPFQVNNDDYERVCCIPKR 673
Y + +Q +R R DV +S A + S+ + + HR ER I R
Sbjct: 236 YLSPPMKPYQYLMRGLRLEEDVFTMSEASLISQENYALNLHRAPNHRPGTIERFKLI--R 293
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDE 733
G RD+ R DP + K K ++P ++ R+ +E
Sbjct: 294 PGEGLRDI---------MTRLDPDTVADLQK--KKILPKSWYIQRNR-------RILLNE 335
Query: 734 IVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGP 778
TV + LLHP Q+R +T RE ARLQ FPD Y + GP
Sbjct: 336 PSPTVTSHCLSE---LLHPLQNRHITPREAARLQSFPDWYYIEGP 377
>gi|171679563|ref|XP_001904728.1| hypothetical protein [Podospora anserina S mat+]
gi|170939407|emb|CAP64635.1| unnamed protein product [Podospora anserina S mat+]
Length = 1287
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 12/161 (7%)
Query: 408 GPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNP 467
P +D P G + L +G S+ +P PGDV+ I G PC GF+
Sbjct: 849 APDQDIVHPFYG---SVDDLLRLALEGKFSDNVPRPGDVEVISAGSPC---PGFSLLTID 902
Query: 468 QAALEDIKNRQLLV-FMDVIEYLKPKYVLMENVVDILKF----SGGFLARYAVGRLVSMD 522
+ L+ KN+ ++ F I++ +PKY ++ENV I++ S L++ ++ +
Sbjct: 903 KKDLKQTKNQSMVASFAAFIDFYRPKYAVLENVASIVQAHQNRSQDTLSQLFCA-VIGLG 961
Query: 523 YQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
YQ +L A ++G PQ R RVFL A P +LP+ P P+H
Sbjct: 962 YQAQLVNGDAWTHGAPQSRNRVFLLIATPDVRLPEAPAPSH 1002
>gi|381402080|ref|ZP_09926961.1| site-specific DNA-methyltransferase [Kingella kingae PYKK081]
gi|380832889|gb|EIC12776.1| site-specific DNA-methyltransferase [Kingella kingae PYKK081]
Length = 395
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 130/336 (38%), Gaps = 72/336 (21%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL- 503
++ I GGPPCQG S + R+P+ D +N + +M + P + +MENV IL
Sbjct: 67 NISGIIGGPPCQGFS-LSGSRDPK----DPRNSLFMDYMRFVGDFNPSFFVMENVPGILS 121
Query: 504 -KFSGGFLARYAVGRL-VSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLP 561
K G L + + + +S Y + + A +YG+PQ R R+F G R
Sbjct: 122 AKTKNGQLVKEVISSVALSHGYNVHILHLNAANYGVPQARNRIFFIGIR----------- 170
Query: 562 THEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVA 621
+ I+ Y + +K + L DAISDLP + + + Y +
Sbjct: 171 ------------QDYSFIMRYLQPEKITTDKPITLWDAISDLPQIEAGQGVEVVDYADLP 218
Query: 622 RTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDL 681
+ +Q + R + + N S + R ER CI G + D+
Sbjct: 219 KNTYQAWCREHSNAIHNHISMKHTQRL---------------IERFKCI--EWGQSVADV 261
Query: 682 PGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR 741
P E K G + + K Q++ +P D+ T+
Sbjct: 262 P---------------EEHKQRKRGD--ATEISGKTYSQNNMRPRP----DKPAPTLPAS 300
Query: 742 AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
Q + +HP R T RE ARLQ FPD Y G
Sbjct: 301 FQSN---FIHPYLHRNFTAREGARLQSFPDNYIFKG 333
>gi|318042684|ref|ZP_07974640.1| DNA-cytosine methyltransferase [Synechococcus sp. CB0101]
Length = 361
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 126/338 (37%), Gaps = 98/338 (28%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
GD+D GGPPCQG S R A L D +N +L ++ +++ LKPK L ENV
Sbjct: 71 GDLDLFSGGPPCQGFSKQRR----GAHLGDDRNLLVLEYLRLVQELKPKSFLFENVAIFG 126
Query: 504 KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
+ G LA A + Y+ + +GL Q R R L G R
Sbjct: 127 QKRG--LAFLAAMKEALSAYRLYPNFFNSADFGLAQTRHRFMLVGIR------------R 172
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVART 623
+I R + P P ++K + D I D+P ++ SE
Sbjct: 173 DIGFRFLSP--------------PPTVQKWATVRDVIGDMPPPPSDCSEHPD-------- 210
Query: 624 EFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPG 683
++H ++ + ER +P +G ++D+P
Sbjct: 211 ---------------------------FFNHAQTKITKRNIERFSYVP--QGGGWQDIP- 240
Query: 684 VLVGPDNKVRWDPSME---RVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVT 740
WD ++ +KSG PD +GRL WD T+
Sbjct: 241 ----------WDLRLDCHKTADIKSGG--WPDV------------YGRLSWDGQCPTITG 276
Query: 741 RAQPHNRILL-HPSQDRVLTIRENARLQGFPDCYQLFG 777
R HP Q+R LT RE ARLQGFPD + L G
Sbjct: 277 GFDSFTRGRYGHPEQNRALTPREAARLQGFPDNFILTG 314
>gi|430894893|ref|ZP_19484642.1| Alw26I/Eco31I/Esp3I family type II restriction m6 adenine DNA
methyltransferase [Enterococcus faecium E1575]
gi|430555189|gb|ELA94738.1| Alw26I/Eco31I/Esp3I family type II restriction m6 adenine DNA
methyltransferase [Enterococcus faecium E1575]
Length = 940
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 18/183 (9%)
Query: 431 VTKGYRSNIL---PLPGDVDFICGGPPCQGVS--GFNRFRNPQAALEDIKNRQLLVFMDV 485
VT Y I+ + +VD ICGGPPCQG S GF + +P +N+ +L F D+
Sbjct: 748 VTNEYTKEIIIDTAIQNNVDIICGGPPCQGFSLAGFRKSDDP-------RNKLVLDFADI 800
Query: 486 IEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVF 545
I+ ++PK + ENVV +L ++ G +++ Y+ + YG+PQ R RV
Sbjct: 801 IKNVEPKVFVFENVVGLLSYNKGETFNEIKKMFLALGYKLHAETLDFSDYGVPQRRRRVI 860
Query: 546 LWGAR------PFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDA 599
+ G R P K P +I I + I +Y N++ L K + D
Sbjct: 861 IIGVRNNINIEPSKLFPDKITKNKKISVMETIGDLDININSSYMNSKFISLMKNEISYDY 920
Query: 600 ISD 602
D
Sbjct: 921 YLD 923
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 27/137 (19%)
Query: 643 QMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVM 702
++ S+ +L D + + ++ D E + +P+ G N++++P D ++E+
Sbjct: 554 KVLSKKGILND-KQYTLSELDLEIIKSVPQ--GGNWKNIP------------DKTIEK-- 596
Query: 703 LKSGKPLVPDYAMKF-EHQSSTKPFGRLWWDEIVNTVVTR-AQPHNRILLHPSQDRVLTI 760
K L MK E T +GR+ + T+ T +P N +HP+QDRVLT
Sbjct: 597 ---SKRL-----MKIRETGGRTTLYGRIDYTNPSYTITTYFNRPGNGCYIHPTQDRVLTT 648
Query: 761 RENARLQGFPDCYQLFG 777
RE AR+Q FPD Y +G
Sbjct: 649 REGARIQCFPDDYYFYG 665
>gi|458402|gb|AAA50432.1| M-XorII [Xanthomonas oryzae]
Length = 424
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 131/351 (37%), Gaps = 110/351 (31%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL- 503
D+D + GG PCQG S + AL+D +N+ + ++ V+ LKPKY + ENV +
Sbjct: 73 DIDIVIGGAPCQGFSLIGK-----RALDDSRNQLVHHYVRVVMELKPKYFVFENVKGLTV 127
Query: 504 ----KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+F + + G D T ++ A YG+PQ R R+ L GAR LP YP
Sbjct: 128 GKHRQFLKEVIEAFQNG---GYDVVTDYRVLNAADYGVPQDRRRLILMGARKGLPLPAYP 184
Query: 560 LPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER---- 615
PT + DAI D+P + ER
Sbjct: 185 EPTGRTT-----------------------------VGDAIGDIPDAESFPELWERDWVK 215
Query: 616 -KYGTVARTEFQKYIRLRRHDVVNLSSAQ----MASRPSLLYDH------RPFQVNNDDY 664
KYG + + Y+R ++ D + + M SLL DH R + DD
Sbjct: 216 AKYGKP--STYAAYLRGKKDDPTDFGYRRQFDPMLLTGSLLTDHTELSRQRFAAIAPDDV 273
Query: 665 ERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTK 724
E V + F+ L L G N +R + +R S +P
Sbjct: 274 EPV--------SRFKKL--ALNGICNTLRAGTASDRGAFTSPRP---------------- 307
Query: 725 PFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
+HP+ RV+T+RE ARL +PD ++
Sbjct: 308 -------------------------IHPTVPRVITVREAARLHSYPDWFRF 333
>gi|157164246|ref|YP_001466260.1| modification methylase HaeIII (cytosine-specificmethyltransferase
HaeIII; M.HaeIII) [Campylobacter concisus 13826]
gi|112801543|gb|EAT98887.1| modification methylase HaeIII (Cytosine-specificmethyltransferase
HaeIII) (M.HaeIII) [Campylobacter concisus 13826]
Length = 388
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 134/335 (40%), Gaps = 68/335 (20%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
D+D I GGPPCQ S + R+P + +D +N +++++ Y KPK+ + ENV IL
Sbjct: 80 SDIDVIIGGPPCQSFSSHGKARDPFSMKKDPRNYLYENYLNILNYFKPKFFVFENVSGIL 139
Query: 504 --KFSGGFLAR---YAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQY 558
K G + + + + ++ + ++ A +G+PQ R R+ + G R K L
Sbjct: 140 STKIKGKSIIKDIFDGMKKNYNIIENKDMILLNAVDFGVPQDRKRIIIIGTR--KDLSIN 197
Query: 559 PLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYG 618
P I +E + I + K + DAISDLP + +E +
Sbjct: 198 P---------KSIYDELKNI---------TKKLKKTTVRDAISDLPKLKPSEGMQTVNFN 239
Query: 619 TVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANF 678
++ + K IR ++ LL+ H N D +R + K K
Sbjct: 240 PTNKSSYLKLIRQNNYN--------------LLHGHIARNHNELDRKRYRLMAKNK---- 281
Query: 679 RDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTV 738
WD S + K+ L+ F + + +D T+
Sbjct: 282 ---------------WDLS---DLYKNEPSLIHIKKRLFNNSYCVQN-----YDAPSKTI 318
Query: 739 VTRAQPHNRILLHP--SQDRVLTIRENARLQGFPD 771
+ +HP +Q+R +T RE ARLQ FPD
Sbjct: 319 IAHLYKDGNQFIHPDYTQERSITPREAARLQSFPD 353
>gi|62297515|sp|P52311.2|MTX2_XANOR RecName: Full=Modification methylase XorII; Short=M.XorII; AltName:
Full=Cytosine-specific methyltransferase XorII
Length = 424
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 131/351 (37%), Gaps = 110/351 (31%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL- 503
D+D + GG PCQG S + AL+D +N+ + ++ V+ LKPKY + ENV +
Sbjct: 73 DIDIVIGGAPCQGFSLIGK-----RALDDSRNQLVHHYVRVVMELKPKYFVFENVKGLTV 127
Query: 504 ----KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+F + + G D T ++ A YG+PQ R R+ L GAR LP YP
Sbjct: 128 GKHRQFLKEVIEAFQNG---GYDVVTDYRVLNAADYGVPQDRRRLILMGARKGLPLPAYP 184
Query: 560 LPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER---- 615
PT + DAI D+P + ER
Sbjct: 185 EPTGRTT-----------------------------VGDAIGDIPDAESFPELWERDWVK 215
Query: 616 -KYGTVARTEFQKYIRLRRHDVVNLSSAQ----MASRPSLLYDH------RPFQVNNDDY 664
KYG + + Y+R ++ D + + M SLL DH R + DD
Sbjct: 216 AKYGKP--STYAAYLRGKKDDPTDFGYRRQFDPMLLTGSLLTDHTELSRQRFAAIAPDDV 273
Query: 665 ERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTK 724
E V + F+ L L G N +R + +R S +P
Sbjct: 274 EPV--------SRFKKL--ALNGICNTLRAGTASDRGAFTSPRP---------------- 307
Query: 725 PFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
+HP+ RV+T+RE ARL +PD ++
Sbjct: 308 -------------------------IHPTVPRVITVREAARLHSYPDWFRF 333
>gi|58580230|ref|YP_199246.1| modification methylase XorII [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|58424824|gb|AAW73861.1| Modification methylase XorII [Xanthomonas oryzae pv. oryzae KACC
10331]
Length = 442
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 131/351 (37%), Gaps = 110/351 (31%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL- 503
D+D + GG PCQG S + AL+D +N+ + ++ V+ LKPKY + ENV +
Sbjct: 91 DIDIVIGGAPCQGFSLIGK-----RALDDSRNQLVHHYVRVVMELKPKYFVFENVKGLTV 145
Query: 504 ----KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+F + + G D T ++ A YG+PQ R R+ L GAR LP YP
Sbjct: 146 GKHRQFLKEVIEAFQNG---GYDVVTDYRVLNAADYGVPQDRRRLILMGARKGLPLPAYP 202
Query: 560 LPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER---- 615
PT + DAI D+P + ER
Sbjct: 203 EPTGRTT-----------------------------VGDAIGDIPDAESFPELWERDWVK 233
Query: 616 -KYGTVARTEFQKYIRLRRHDVVNLSSAQ----MASRPSLLYDH------RPFQVNNDDY 664
KYG + + Y+R ++ D + + M SLL DH R + DD
Sbjct: 234 AKYGKP--STYAAYLRGKKDDPTDFGYRRQFDPMLLTGSLLTDHTELSRQRFAAIAPDDV 291
Query: 665 ERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTK 724
E V + F+ L L G N +R + +R S +P
Sbjct: 292 EPV--------SRFKKL--ALNGICNTLRAGTASDRGAFTSPRP---------------- 325
Query: 725 PFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
+HP+ RV+T+RE ARL +PD ++
Sbjct: 326 -------------------------IHPTVPRVITVREAARLHSYPDWFRF 351
>gi|409422062|ref|ZP_11259177.1| modification methylase XorII [Pseudomonas sp. HYS]
Length = 428
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 134/340 (39%), Gaps = 87/340 (25%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
D+D + GG PCQG S + AL+D +N+ + ++ ++ LKPKY + ENV +
Sbjct: 80 DIDVVFGGAPCQGFSMIGK-----RALDDSRNQLVFHYVRIVAELKPKYCVFENVKGLTL 134
Query: 505 FSGGFLARYAVGRLVSMDYQTRL--GIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
+ + L Y L ++ A YG+PQ R R+FL G R P+YP P
Sbjct: 135 GKHAEFLKELIAALGEAGYDVTLPYRVLNAADYGVPQDRKRLFLIGTRRGLNTPEYPEP- 193
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVAR 622
QL++ V + +AISDLP
Sbjct: 194 --------------------------QLKR-VNVGEAISDLP------------------ 208
Query: 623 TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDD--YERVCCIPKRKGANFRD 680
+ + LR +D V + A AS L R +V+ +D YER RD
Sbjct: 209 -DANTFEELRENDQVVVQWATHASYARRL---RGLEVDANDFGYER---------DFLRD 255
Query: 681 LPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTV-- 738
+ + E L + L + K E S F +L D + NT+
Sbjct: 256 I----------LTSSTRTEHTALSQSRFLATEPG-KTEEVSR---FRKLPMDGLCNTLRA 301
Query: 739 ---VTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
R + +HP+ RV+T+RE ARL FPD ++
Sbjct: 302 GTDSARGAFTSPRPIHPNLPRVITVREAARLHSFPDWFRF 341
>gi|389684676|ref|ZP_10176003.1| DNA (cytosine-5-)-methyltransferase [Pseudomonas chlororaphis O6]
gi|388551413|gb|EIM14679.1| DNA (cytosine-5-)-methyltransferase [Pseudomonas chlororaphis O6]
Length = 554
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 143/386 (37%), Gaps = 79/386 (20%)
Query: 446 VDFICGGPPCQGVS--GFNRFRNPQAALEDIKNRQLLV----------FMDVIEYLKPKY 493
+D + GGPPCQ + G + R E++ Q + ++ I KP
Sbjct: 138 IDVLVGGPPCQAFARVGRAKLREQARLREEVTADQAFLVDGRVSLWERYVAFIRATKPVA 197
Query: 494 VLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWG-ARPF 552
+LMENV DIL G +A L Y ++ + YG+PQ R R+ L G R
Sbjct: 198 LLMENVPDILNHGGTNVAELVSKSLAEEGYDVAYTLLNSVWYGVPQMRERMILVGFHRST 257
Query: 553 KKLPQYPLPTHEIV-----------ARGVIPNE---FQEIIVAYANNQPCQLEKGVLLSD 598
P++P+PTH ++ AR VI E I A P SD
Sbjct: 258 GIKPRFPVPTHHLILPSGYTSSKSAARRVIKAEGSAHHRWIPDPAPESPAATSA----SD 313
Query: 599 AISDLPLVTNNE---SEDERKYGT--------VARTEFQKYIRLRR--HDVVNLSSAQMA 645
A++DLP + E S R+ A Y RL R H S+
Sbjct: 314 ALADLPHLYAEEMLLSGAIRRGAKDPSEPVEYTAEKPSTAYSRLMREWHGFATRSTTGHV 373
Query: 646 SRPSLLYDHRPFQVNND-----DYERVCCIPKRKGANF---RDLPGVLVGPDNKVRWDPS 697
R Y R +++ + +Y +V ++K AN+ R G+ P N
Sbjct: 374 FR----YLPRDYKIFAEIQPGWEYPQVHAYVEQKIANWLADRRRLGLPTDPRNAD----- 424
Query: 698 MERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWW----DEIVNTVVTR--AQPHNRILLH 751
V Y M + F WW D V T++ ++ I
Sbjct: 425 ------------VSTYIMSWRIPYDPGKFPNKWWKLRADAPVRTLMAHLGKDSYSHIHFD 472
Query: 752 PSQDRVLTIRENARLQGFPDCYQLFG 777
Q R +T+RE ARLQ FPD + G
Sbjct: 473 SKQARTITVREAARLQSFPDGFVFKG 498
>gi|302415627|ref|XP_003005645.1| DNA methyltransferase Dim-2 [Verticillium albo-atrum VaMs.102]
gi|261355061|gb|EEY17489.1| DNA methyltransferase Dim-2 [Verticillium albo-atrum VaMs.102]
Length = 1373
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 129/336 (38%), Gaps = 96/336 (28%)
Query: 475 KNRQLLV-FMDVIEYLKPKYVLMENVVDILKFSGGFLAR------YAVGRLVSMDYQTRL 527
KN+ L+ F I+ +PKY L+ENVV++++ G R + +V M YQT
Sbjct: 851 KNQSLVAAFASFIDIYRPKYGLLENVVEMIQ---GRKTREEDVFCQLICAIVGMGYQTHF 907
Query: 528 GIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQP 587
++ A ++G PQ R R+F A P +LP+ P+ +H +P + + +N
Sbjct: 908 FLLDAWTFGSPQSRSRIFFAFAAPGLRLPEVPMQSH-------LPLAMRSRSLGLLSNGE 960
Query: 588 CQLEK--------GVLLSDAISDLPLVTNNESE------DERKYGTVARTEFQKYIRLRR 633
L K V A++DLP + + +++ D R+ V R
Sbjct: 961 PMLRKTFMPTAFASVTARQALTDLPDIADAKADCCIPFPDHRQSIGVTRL---------- 1010
Query: 634 HDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVR 693
RP L C+P R
Sbjct: 1011 ------------LRPQL-----------------SCMPTRP------------------- 1022
Query: 694 WDPSMERVMLKSGKPLVPD----YAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQP---HN 746
W ++ K P+ Y S+K FGRL D+++ T+ T P +
Sbjct: 1023 WGLNLSTAYNKGHGPITAAEMSLYPQAKRQGPSSKAFGRLHPDKLMGTITTTPSPSDGYG 1082
Query: 747 RILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
R +LH Q+R+LT+ E R QGF D + G E+
Sbjct: 1083 RAVLHWEQNRILTVMEARRAQGFRDHEVILGTPAEQ 1118
>gi|428305832|ref|YP_007142657.1| DNA-cytosine methyltransferase [Crinalium epipsammum PCC 9333]
gi|428247367|gb|AFZ13147.1| DNA-cytosine methyltransferase [Crinalium epipsammum PCC 9333]
Length = 435
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 70/136 (51%), Gaps = 17/136 (12%)
Query: 432 TKGYRSNILPLPGD--VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYL 489
T G I+P G+ +D + GGPPCQG S + L+D +N F+ +I L
Sbjct: 62 TTGKDIRIIPAIGNKEIDIVFGGPPCQGFSLMGK-----RMLDDPRNSLAFHFIRLIGEL 116
Query: 490 KPKYVLMENVVDIL-----KFSGGFLARY-AVGRLVSMDYQTRLGIMAAGSYGLPQFRLR 543
+PKY ++ENV + KF + + +G L DYQ I+ A YG+PQ R R
Sbjct: 117 QPKYFVLENVRGMAIGKHKKFIAEIIEEFQKIGYLTKSDYQ----ILNAAEYGVPQNRER 172
Query: 544 VFLWGARPFKKLPQYP 559
+FL G R +LP+YP
Sbjct: 173 LFLIGCRQDMQLPKYP 188
>gi|400975521|ref|ZP_10802752.1| DNA-methyltransferase Dcm [Salinibacterium sp. PAMC 21357]
Length = 458
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 144/354 (40%), Gaps = 48/354 (13%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL-K 504
+D + GGPPCQG S R RNP +D++N +++ ++ PK V++ENVV + K
Sbjct: 92 IDVVVGGPPCQGFSLAGR-RNP----DDVRNTLPWEYLEFVKRTAPKMVVIENVVGMSHK 146
Query: 505 FS----GGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPL 560
FS F+ R Y+ + + A YG PQ R R+ + G R +
Sbjct: 147 FSPDEEAPFVQLQQALRETEPGYEVQGVAVNAVHYGAPQNRPRLMIIGMRSDVAQQRGIK 206
Query: 561 PTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISD----LPLVTNNESEDERK 616
T + +E E A A N ++ ++DAI D LP + S K
Sbjct: 207 ATGRLWKSAFTDDEKFEPAPALAPNPTVSSKESPTIADAIGDLQDVLPAPKSRRSTAFHK 266
Query: 617 YGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGA 676
+ ++RR + N S + + S R +Q D+ G
Sbjct: 267 STSTRTLWGLPKSKVRREHLPNQSPRKHSE--STTQRFRLYQWLRDN-----------GL 313
Query: 677 NFRDLPGVLVGPDNKVRWDPSMERVMLKSGK--PLVPDYAMKFEHQSS---------TKP 725
R L + GP S R+ L K + PD A+ + S TK
Sbjct: 314 QPRLLSQLSSGPAEAA----SHVRLQLADAKYPAIAPDGALLADSAESMFDLMVELKTKK 369
Query: 726 FGR--LWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ L W + TVVT + +HPS+ R+ T+RE AR QGFPD ++ G
Sbjct: 370 HSQKALDWSQPARTVVTLPDDY----VHPSEPRIFTVREMARFQGFPDDFEFRG 419
>gi|11138959|gb|AAG31558.1| SgrAIM methylase [Streptomyces griseus]
Length = 429
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 134/333 (40%), Gaps = 62/333 (18%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
G++D + GGPPCQG S L+D +N+ ++ V++ L+P+ LMENV ++L
Sbjct: 99 GNIDLLFGGPPCQGYSQIG-----TRILDDPRNQLYAEYVRVLKTLRPRVFLMENVPNML 153
Query: 504 KFSGGFLARYAVGRLVSMDYQT-RLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
G R + Y + ++AA +G+PQ R R +G R + L
Sbjct: 154 LMDKGRFKREVLAAFAEAGYSNCGVTVVAASDHGVPQLRRRAIFFGVRDGENL------- 206
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVAR 622
GV + + + V + AI DLP VT + E R T A+
Sbjct: 207 ------GV------DAHAFLEAALAAERKPEVSVRQAIGDLPEVTASHYEPVRYPVTRAK 254
Query: 623 TEFQKYIRLRRHDVVNLSSAQMASRPS--LLYDHRPFQVNNDDYERVCCIPKRKGANFRD 680
F +RL R D S A+ + + + +L++H ++ +RK
Sbjct: 255 NPFLDEMRLNR-DGQWYSRAEKSKKSTAKVLHNHHTKEIQ----------ARRKALIALL 303
Query: 681 LPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVT 740
PG K W+ + L+ + L PD KP T++
Sbjct: 304 APGAKADSLPKEIWNGA----RLEKWRRLHPD-----------KP---------AYTILA 339
Query: 741 RAQPHNRILLHPSQDRVLTIRENARLQGFPDCY 773
+ +HP +R +T+RE ARLQ F D +
Sbjct: 340 QMHRDMSEWVHPDYERWITVREAARLQSFHDGF 372
>gi|410647642|ref|ZP_11358062.1| DNA (cytosine-5-)-methyltransferase [Glaciecola agarilytica NO2]
gi|410132738|dbj|GAC06461.1| DNA (cytosine-5-)-methyltransferase [Glaciecola agarilytica NO2]
Length = 418
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 151/369 (40%), Gaps = 91/369 (24%)
Query: 431 VTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLK 490
+ K Y + L G VD I GGPPCQG S R RN + D +N+ ++++++ +
Sbjct: 77 ILKNYSEQLSNLKGKVDLIAGGPPCQGFSLAGR-RNAK----DPRNKLSDEYINMVKLIS 131
Query: 491 PKYVLMENVVDI---LKFSGGFLAR--YAV---GRLVSMDYQTRLGIMAAGSYGLPQFRL 542
PKY+++ENV K S G + Y++ RL + Y+ + + +YG+PQ R
Sbjct: 132 PKYLVLENVRGFNSTFKDSEGNKEKQPYSMVVKARLEKLGYKVFTDYVHSENYGVPQKRT 191
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVA-YANNQPCQLEKGVLLSDAIS 601
R + G R ++V + V P E E + + + N+ L K V + AI
Sbjct: 192 RFIMVGIR------------KDLVTKVVNPFELLESLRSDFLGNKKLPL-KPVSVKQAIG 238
Query: 602 DLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQM-----ASRPSLL--YDH 654
DL S+ E Y + + K I+ + +N QM S+P+ L H
Sbjct: 239 DL-----ETSKSELIYHSGSEKSGFKQIQYKPPAYLNAYQKQMRKGLNGSQPNSLRIARH 293
Query: 655 RPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYA 714
+P + + C P G D
Sbjct: 294 KPVTIAKFKLVQSLCEP---GKGLSD---------------------------------- 316
Query: 715 MKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI------LLHPSQDRVLTIRENARLQG 768
EH+++ L + V +V+ +P + LLH S+ R+LT+RENAR+Q
Sbjct: 317 ---EHKAT------LGTKKQVISVLNSKEPSRTLTTLPDDLLHYSEPRILTVRENARIQS 367
Query: 769 FPDCYQLFG 777
FPD + G
Sbjct: 368 FPDDFVFRG 376
>gi|392331194|ref|ZP_10275809.1| DNA-cytosine methyltransferase [Streptococcus canis FSL Z3-227]
gi|391418873|gb|EIQ81685.1| DNA-cytosine methyltransferase [Streptococcus canis FSL Z3-227]
Length = 411
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 137/334 (41%), Gaps = 75/334 (22%)
Query: 449 ICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYL---KPKYVLMENVVDILKF 505
I GGPPCQ S R N + +D NR + ++ IE+L +P++ + ENV +L F
Sbjct: 109 IIGGPPCQAYSTIGRAAN--RSKKDTDNR-IYLYRYYIEFLRKYRPRFFVFENVKGLLSF 165
Query: 506 ---SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
+G L + Y ++ YG+PQ R R+ ++G
Sbjct: 166 RDTNGHLLFPMMQEEFREIGYSIDYRLVNTADYGIPQRRERIIIFG-------------- 211
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVAR 622
+PN+ E+I + + + E+ + + A+SDLP ++ + +++ ++
Sbjct: 212 --------VPNDSSELIEKFFDALQSKKEQPISVRTALSDLPQLSQGQEKNQYQHNP--- 260
Query: 623 TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCI-PKRKGANFRDL 681
Y+R ++ Q +RP HR +++ Y+ V K K + +L
Sbjct: 261 ---NDYVRKHFRKNPSILLTQNVARP-----HR--EIDLKIYKEVALARSKGKRLKYNEL 310
Query: 682 PGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR 741
L+ + D ++R F L W++ +TVV
Sbjct: 311 DRSLITHKHT---DKFLDR-------------------------FKALDWNQPAHTVVAH 342
Query: 742 AQPHNRILLHP--SQDRVLTIRENARLQGFPDCY 773
+HP Q+R +T+RE ARLQGFPD +
Sbjct: 343 IAKDGHHYIHPDIKQNRSITVREAARLQGFPDDF 376
>gi|158321055|ref|YP_001513562.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs]
gi|158141254|gb|ABW19566.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs]
Length = 448
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 132/348 (37%), Gaps = 78/348 (22%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
D I GGPPCQ S R R A D +N + +++++ KP+ + ENV IL
Sbjct: 127 TDLIIGGPPCQAYSLVGRGRMKDKAETDKRNYLFRYYKEIVKHFKPRMFIFENVPGILNA 186
Query: 506 SGGFLARYAVGRLVSMDYQTRLG--------IMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
G + + V + Y G I+ A +G+ Q R R+ L+G R Q
Sbjct: 187 KKGEVFKSIVDEFKEIGYILLAGTNDDPKECILHASDFGVHQSRKRMILFGFRDDLNY-Q 245
Query: 558 YPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKY 617
YP +F++ ++ N + +AI DLP + + + D
Sbjct: 246 YP--------------DFKKYAYSFEN---------MTTKNAIGDLPKLKSGQGSDFDTL 282
Query: 618 GTVAR-----TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPK 672
V+ + FQ+ +R V+N S R +Y
Sbjct: 283 NYVSNEGESLSAFQRLMRADSIGVINHKSRSNQERDLRIY-------------------- 322
Query: 673 RKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWD 732
+K F + L+ D P +R K+ K + + + + +
Sbjct: 323 KKAIEFAESGKRLMYTD-----IPEEDRTH-KNEKAFLDRFKVHMK-------------N 363
Query: 733 EIVNTVVTRAQPHNRILLHP--SQDRVLTIRENARLQGFPDCYQLFGP 778
EI +T+V +HP +Q R LT+RE AR+Q FPD Y GP
Sbjct: 364 EIPHTIVAHISKDGHYNIHPDINQCRSLTVREAARIQSFPDNYIFEGP 411
>gi|164510148|emb|CAJ40945.1| putative DNA cytosine methyltransferase [Sordaria macrospora]
Length = 1536
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 19/137 (13%)
Query: 425 EKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FM 483
+ L +G S+ +P PG+VDFI G PC GF+ + L +KN+ L+ F
Sbjct: 914 DDLLRLALEGKFSDNVPRPGEVDFIAAGSPC---PGFSLLTQDKKVLNQVKNQSLVASFA 970
Query: 484 DVIEYLKPKYVLMENVVDILK---------FSGGFLARYAVGRLVSMDYQTRLGIMAAGS 534
+++ +PKY ++ENV I++ S F A L+ M YQ +L + A +
Sbjct: 971 SFVDFYRPKYGVLENVSGIVQTFVNRKQDVLSQLFCA------LIGMGYQAQLTLGDAWA 1024
Query: 535 YGLPQFRLRVFLWGARP 551
+G PQ R RVFL+ A P
Sbjct: 1025 HGAPQSRERVFLYFAAP 1041
>gi|336273254|ref|XP_003351382.1| hypothetical protein SMAC_03688 [Sordaria macrospora k-hell]
gi|380092903|emb|CCC09656.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1536
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 19/137 (13%)
Query: 425 EKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FM 483
+ L +G S+ +P PG+VDFI G PC GF+ + L +KN+ L+ F
Sbjct: 914 DDLLRLALEGKFSDNVPRPGEVDFIAAGSPC---PGFSLLTQDKKVLNQVKNQSLVASFA 970
Query: 484 DVIEYLKPKYVLMENVVDILK---------FSGGFLARYAVGRLVSMDYQTRLGIMAAGS 534
+++ +PKY ++ENV I++ S F A L+ M YQ +L + A +
Sbjct: 971 SFVDFYRPKYGVLENVSGIVQTFVNRKQDVLSQLFCA------LIGMGYQAQLTLGDAWA 1024
Query: 535 YGLPQFRLRVFLWGARP 551
+G PQ R RVFL+ A P
Sbjct: 1025 HGAPQSRERVFLYFAAP 1041
>gi|347726868|gb|AEP19812.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L +++++ LKP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVRALKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPF 552
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGASRF 175
>gi|46019826|emb|CAE52348.1| putative cytosine-specific methyltransferase [Streptococcus
thermophilus]
Length = 365
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 135/339 (39%), Gaps = 92/339 (27%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D I GPPCQG S + D +N+ + + +++ KPK L+ENV +
Sbjct: 74 IDVIIAGPPCQGFS-----LTGSRDINDSRNKLYVAVVHAVKHFKPKAFLIENVPGMATL 128
Query: 506 SGGFLARYAVGRLVSMDYQTRLG--IMAAGSYGLPQFRLRVFLWGARPFKKLP----QYP 559
G + + + Y + + A YG+PQ R R+F G R K L ++P
Sbjct: 129 YKGKVKEQIINTFEDLGYAVSVTDKPLLAADYGVPQIRKRMFFVGYR--KDLNYEYFKFP 186
Query: 560 LPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGT 619
PT + P +K + +DAISDLP + + E+ Y
Sbjct: 187 EPT-------LTP------------------DKHIGTADAISDLPALVDELGEENVPYHM 221
Query: 620 VARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCC-IPKRKGANF 678
++E+Q+ +R + SL+ + + D+ + V +P +G N
Sbjct: 222 EPQSEYQRLMR----------------KNSLVIHNHIGTRHTDEVKWVISQVP--EGGNH 263
Query: 679 RDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTV 738
+DLP G + +++ + R + Q +K T+
Sbjct: 264 KDLP---PGVGDSRKFNEAWTR----------------YHSQKPSK------------TI 292
Query: 739 VTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
T + H H +RV T+RENARLQ FPD ++ G
Sbjct: 293 DTGHRNH----FHYKWNRVPTVRENARLQSFPDDFEFLG 327
>gi|260890952|ref|ZP_05902215.1| modification methylase NgoFVII [Leptotrichia hofstadii F0254]
gi|260859505|gb|EEX74005.1| modification methylase NgoFVII [Leptotrichia hofstadii F0254]
Length = 452
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 150/359 (41%), Gaps = 55/359 (15%)
Query: 440 LPLP-GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMEN 498
+PL G+VD I GG PCQG S N+ R ++ED +N + +I+ KPK+ + EN
Sbjct: 67 IPLKKGEVDLIIGGFPCQGFSIANKNR----SMEDKRNFLYKEMLRIIKDKKPKFFIAEN 122
Query: 499 VVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQY 558
V IL G + + + + Y+ + ++ A YG+PQ R RV + G R K P Y
Sbjct: 123 VKGILSLHNGEVIKMILKDFEDLGYKVDVKLLNAADYGVPQQRERVIIMGNRLGLKNP-Y 181
Query: 559 PLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL--VTNNESED--- 613
P TH + P E + ++ + L+ + + I L V N++ D
Sbjct: 182 PKKTHA----DLFPGE-ENYLLFDEKLKGTNLKPYITVEQTIGFLSEIDVQNDKLNDFVK 236
Query: 614 --ERK-YGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNN-DDYERVCC 669
+RK Y +A T + R+H+V + A + D + D+Y
Sbjct: 237 VGKRKIYNHIANTSVKDTFWGRKHEV---NQADICDYLRYYRDKSEWTTKKIDNY----- 288
Query: 670 IPKRKGANFRDLPGVLVGPDNKVRWDP------SMERVMLKSGK--PLVPDYA---MKFE 718
++ G DNK P +++++ K +V ++ +KFE
Sbjct: 289 ------FGYKHTAGHWFRKDNKSGSIPKPSDWWKLKKILKFDDKYDKVVTEFIEKPIKFE 342
Query: 719 HQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ R V+ +T P +H ++ R L+ RE A LQ FPD + G
Sbjct: 343 QSLRITNWNR------VSDTITATSPE----IHVNKKRRLSARECAMLQTFPDSFVFSG 391
>gi|67924379|ref|ZP_00517809.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
gi|67853772|gb|EAM49101.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
Length = 435
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 124/340 (36%), Gaps = 78/340 (22%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQG S + +LED +N + F+ ++ L+P Y ++ENV ++
Sbjct: 76 IDVVFGGPPCQGFSLMGK-----RSLEDDRNTLVKHFIRLVLELQPNYFVIENVPGMVIG 130
Query: 506 SGGFLARYAVGRLVSMDYQTR--LGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
+YQ + I+ + +YG+PQ R R+FL G++ LP YP
Sbjct: 131 KQQMFLEEIFAEFAQNNYQVKPDYKILNSANYGVPQLRERLFLLGSKKGLNLPNYP---- 186
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVART 623
I Y + L + +AI DLP V + R +
Sbjct: 187 -------------SFITDYTHINDSNLPSTPTVKEAIQDLPEVNQYPELNRRDWVITDYG 233
Query: 624 EFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPG 683
+ YI+ NL A DDY P+
Sbjct: 234 KPSNYIK-------NLRIVSNAI---------------DDY----SYPRHYNKK------ 261
Query: 684 VLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKP---FGRLWWDEIVNTV-- 738
+L S+ER K HQ +P F RL D NT+
Sbjct: 262 LLTSSLRTKHQQKSIER--------------FKETHQGKIEPISRFFRLHPDGFCNTLRA 307
Query: 739 ---VTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
+ R + +HP R +T+RE ARL +PD ++
Sbjct: 308 GTPINRGAHTSPRPIHPFTPRCITVREAARLHSYPDWFRF 347
>gi|399088671|ref|ZP_10753609.1| DNA-methyltransferase Dcm [Caulobacter sp. AP07]
gi|398030459|gb|EJL23871.1| DNA-methyltransferase Dcm [Caulobacter sp. AP07]
Length = 498
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 149/375 (39%), Gaps = 65/375 (17%)
Query: 442 LPGDVDFICGGPPCQGVSGFNRFR------NPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
L VD + GGPPCQ + R + +PQA D + L ++ + +P +L
Sbjct: 103 LENSVDVLVGGPPCQAYARVGRAKLREVADHPQAFKVDPRGNLYLRYLTYVRAFRPLALL 162
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV DIL ++ +A V L ++ Y ++ A +G+PQ R RVF+ R L
Sbjct: 163 IENVPDILHYAHHNVAEEIVEALEALGYVANYSLINAAFHGVPQMRDRVFIVAYRKELGL 222
Query: 556 P-QYPLPTHEIVARGVIPNEF---QEIIVAYANNQPC-----------QLEKGVLLSDAI 600
P ++P TH +P + + + + Y N + L V +DA+
Sbjct: 223 PIRFPKATHHF----DLPVGYAGTRAVALRYVNREGSAGYVAPDLGDESLPFPVTATDAL 278
Query: 601 SDL-PLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSL-----LYDH 654
SDL P++ ++ R++ +F+ Y R D + + M P + DH
Sbjct: 279 SDLPPILGSSVRRGPRRF-----DQFESY---RSSDSLGGYAQTMRQWPGFESAEGVSDH 330
Query: 655 RPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSG------KP 708
+ D + R GA + P R E V + +
Sbjct: 331 VIRALPRD---HLVFAEMRPGAEY---PEAHATGMKIARRRAEAEGVAEGTTAFDEIVRQ 384
Query: 709 LVPDYAMKFEHQSSTKPFGRLWW----DEIVNTVVTR--AQPHNRILLHPSQDRVLTIRE 762
+VP Y T F WW D V T++ ++ I Q R +++RE
Sbjct: 385 IVPPY--------DTTKFPNRWWKLRPDFPVRTLMAHLGKDTYSHIHYDADQARTISVRE 436
Query: 763 NARLQGFPDCYQLFG 777
ARLQ FPD ++ G
Sbjct: 437 AARLQSFPDGFKFSG 451
>gi|336406404|ref|ZP_08587059.1| hypothetical protein HMPREF0127_04372 [Bacteroides sp. 1_1_30]
gi|335934608|gb|EGM96593.1| hypothetical protein HMPREF0127_04372 [Bacteroides sp. 1_1_30]
Length = 419
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 131/343 (38%), Gaps = 81/343 (23%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VDFI GGPPCQ S R R+P+ +D +N ++ ++ +PK + ENV IL
Sbjct: 114 VDFIIGGPPCQAYSIVGRARDPKNMKKDPRNFLYKYYLQFLKRYEPKMFVFENVPGILSA 173
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
G + + Y+ L + A YG+ Q R RV + G R L +YP E
Sbjct: 174 QNGIHLENILKGIDKAGYKIELKKLKASDYGVLQNRERVIIVGWRKELNL-KYPELEKEE 232
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
++P D SDLP ER+ G + T+
Sbjct: 233 NPYKILP-------------------------DLFSDLP---------ERQQGEGSLTDI 258
Query: 626 QKYIR-----LRRHDVVNL--SSAQMASRPSLLYDHRPFQVNNDDYERVC--CIPKRKGA 676
+Y+ L++ V N + Q +RP L D + Y+R + K+
Sbjct: 259 VQYVAPATGYLQQSKVRNSLDFTTQHIARPHNLIDL-------EIYKRAIKLWLEKKARL 311
Query: 677 NFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVN 736
N+ DLP L +NK Q+ F + + +
Sbjct: 312 NYADLPPELQKHNNK----------------------------QAFLNRFQVVNHEGCCH 343
Query: 737 TVVTRAQPHNRILLHPS--QDRVLTIRENARLQGFPDCYQLFG 777
TVV ++PS Q R +T+RE AR+Q FPD Y G
Sbjct: 344 TVVAHIAMDGHYYIYPSLKQIRSITVREAARIQSFPDDYYFEG 386
>gi|444424849|ref|ZP_21220301.1| modification methylase DdeI [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444241972|gb|ELU53490.1| modification methylase DdeI [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 418
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 149/359 (41%), Gaps = 78/359 (21%)
Query: 435 YRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYV 494
Y + L G VD I GGPPCQG S R RN + D +N+ ++ ++E + PKY+
Sbjct: 80 YPEQLTALKGKVDLIAGGPPCQGFSLAGR-RNAK----DPRNKLSDEYIKMVEIVSPKYL 134
Query: 495 LMENVVDILKFSGGFLA-----------RYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLR 543
L+ENV F+ F A +L + Y+ + + +G+PQ R R
Sbjct: 135 LLENVRG---FNASFKALEGKKAKKPHSMIVKAKLEKLGYKVFTDFLCSADFGVPQKRTR 191
Query: 544 VFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVA---YANNQPCQLEKGVLLSDAI 600
+ G + ++V + N F+ I + + N + L + V +SDAI
Sbjct: 192 FIMIGVK------------DDLVDKN-FENPFEVISHSRRDFLNRKKLPL-RPVKVSDAI 237
Query: 601 SDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVN 660
DL + TN + ++ F+K ++ S+PS
Sbjct: 238 GDLLVQTNGLVH----HSGNDKSGFKKV------------DYKLPSKPS----------- 270
Query: 661 NDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERV--MLKSGKPLVPDYAMKFE 718
Y RV RKG+ + P L +K+ ++ + K G L + M+ E
Sbjct: 271 --RYLRVI----RKGSG-KSKPNSLRLARHKLSTIEKFTKIQEICKPGVSL--NDQMRLE 321
Query: 719 HQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ + L DE T+ T LLH S+ R+LT+RE AR+Q FPD + + G
Sbjct: 322 IGTKKQAITVLNADEPSKTLTTLPDD----LLHYSEPRILTVREMARIQSFPDSFDILG 376
>gi|394989956|ref|ZP_10382788.1| hypothetical protein SCD_02381 [Sulfuricella denitrificans skB26]
gi|393790221|dbj|GAB72427.1| hypothetical protein SCD_02381 [Sulfuricella denitrificans skB26]
Length = 397
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 147/360 (40%), Gaps = 62/360 (17%)
Query: 437 SNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLM 496
+ ILP + + G PCQG S + R L+D +N L + + L PK ++
Sbjct: 62 TGILPAYDKCEIVLAGSPCQGFSTAGKRR-----LDDPRNHLLYSAVTIAIRLAPKVMVF 116
Query: 497 ENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFL--WGAR---- 550
ENV +L+ + A L + Y T+ ++ A G+PQ R RV L W ++
Sbjct: 117 ENVPGLLQGAHKKHFDKACAELQAAGYDTKTIVLDARDTGIPQSRRRVILLAWNSKAHFA 176
Query: 551 PFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNE 610
P K + H I + AN++P +L+ D SD+ +
Sbjct: 177 PSIKRRESVSLEHTIAG-----------VDGLANHEP------ILMQDGSSDVKIAARIA 219
Query: 611 SEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCI 670
+ QK +R D +S P + R Q + E V +
Sbjct: 220 AG-------------QKLCNVRGSD----ASVHTWQIPEVF--GRVSQREQELLEAVMRL 260
Query: 671 PKRKGA-NFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVP-------DYAMKFEHQSS 722
+R +F D P ++ + + R + K + LV D+A+ H +
Sbjct: 261 RRRLRLRDFGD-----ADPVSRQALEKELGRTLKKEIRQLVDKGYLREIDFAIDLTHTFN 315
Query: 723 TKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
K + R + TV TR H R LHP ++R T+RE AR+QGFPD Y+ GP+KE+
Sbjct: 316 GK-YRRAHPCGVSYTVDTRFGDH-RYFLHPYENRGFTVREAARIQGFPDSYKFHGPLKEQ 373
>gi|444301295|gb|AGD98763.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+++ I GGPPCQG S N+ +N L+D +N L +++++ LKP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKN--LGLKDPRNFLFLEYIEIVRALKPEIFIIENVKNLIS 127
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPF 552
+ G+ RL ++ YQ I+ A YG+PQ R R F+ GA F
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQDRERAFIVGASRF 175
>gi|448532943|ref|ZP_21621363.1| DNA-cytosine methyltransferase [Halorubrum hochstenium ATCC 700873]
gi|445706177|gb|ELZ58062.1| DNA-cytosine methyltransferase [Halorubrum hochstenium ATCC 700873]
Length = 396
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 91/211 (43%), Gaps = 41/211 (19%)
Query: 412 DTWEPIKGLSKCKEKLKEFVTKGYRSNILPL-----------PGDVDFICGGPPCQGVSG 460
D WEP + EFV + R P PG +D + GGPPCQ G
Sbjct: 54 DQWEPAAETYRRNFPDVEFVEEDVRELDAPAIRESVERAGYDPGGIDVVIGGPPCQ---G 110
Query: 461 FNRFRNPQAALE----DIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGG---FLARY 513
F+R N Q L+ D +N F+ V+ L+P+ VLMENV D++ ++
Sbjct: 111 FSRLNNEQIELDEMEKDRRNTLFEEFLRVVSVLEPQLVLMENVRDLINRQTSDDRYVKDL 170
Query: 514 AVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP-QYPLPT---------H 563
V + Y+ ++ A YG+PQ R R+F G + +P ++P PT
Sbjct: 171 IVDEFAAHGYKCEYRVLEAEQYGVPQKRRRIFFMGTD--RDVPIRFPEPTTPEGSWRTAG 228
Query: 564 EIVARGV--IPNEFQEIIVAYANNQPCQLEK 592
E +A +PN + YAN Q LE+
Sbjct: 229 EALADATDDLPN------MTYANTQEKTLER 253
>gi|288929280|ref|ZP_06423125.1| modification methylase HphIA (Cytosine-specific methyltransferase
HphIA) [Prevotella sp. oral taxon 317 str. F0108]
gi|288329382|gb|EFC67968.1| modification methylase HphIA (Cytosine-specific methyltransferase
HphIA) [Prevotella sp. oral taxon 317 str. F0108]
Length = 370
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 138/349 (39%), Gaps = 93/349 (26%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
G+ + I GGPPCQG S ++D +N +++V++ ++PK + ENV IL
Sbjct: 67 GEAEVIVGGPPCQGFSMAGARIRKNGFIDDPRNYLFKHYLNVVKIVRPKVFVFENVKGIL 126
Query: 504 KFSGGFLARYAV----------GRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWG----A 549
G + R V G ++Y+T + A +G+P+ R R+F+ G +
Sbjct: 127 SMKKGEIFREIVSAFSNPANFDGNHYFINYKT----VKAIEFGVPEKRERLFVIGTLNKS 182
Query: 550 RPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNN 609
+KL Q L +I+A P+ F ++ V DAI+ LP+
Sbjct: 183 IELEKLEQ--LTRTQILAEN--PSFFDDVTVG----------------DAIAGLPM---- 218
Query: 610 ESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCC 669
SED +Q+Y + S+ L +H+ R+
Sbjct: 219 PSEDGMIENPRPCNRYQEY---------------LCSKNDTLTNHKATIHTETAVGRMRQ 263
Query: 670 IPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRL 729
I +KG N+ L + ++ H S +GR+
Sbjct: 264 I--QKGQNWTSL------------------------------EEEIRSVHSGS---YGRM 288
Query: 730 WWDEIVNTVVTRA-QPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
WDE T+ TR P HP ++R +T RE AR+Q FPD + +G
Sbjct: 289 SWDEPSATITTRFDTPSGGRFTHPEENRTITPREAARIQSFPDDFVFYG 337
>gi|288919493|ref|ZP_06413824.1| DNA-cytosine methyltransferase [Frankia sp. EUN1f]
gi|288349096|gb|EFC83342.1| DNA-cytosine methyltransferase [Frankia sp. EUN1f]
Length = 640
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 129/338 (38%), Gaps = 78/338 (23%)
Query: 446 VDFICGGPPCQGVS--GFNRFRNPQA----ALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
+D + GGPPCQ S G ++ R+ A + D + + F+ V+ LKP+ VLMENV
Sbjct: 109 IDLVAGGPPCQPYSRAGASKIRSLVAQGTRSRVDPRRELWMAFLSVVFELKPRAVLMENV 168
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
D+ R VG L Y T I+ + +PQ R R+ L R + +P
Sbjct: 169 PDMGLGDDFQTVRRIVGDLEECGYATEARIIDTWKFRVPQHRRRLILLARRDGDRF-TWP 227
Query: 560 LPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGT 619
P HE P V ++DAI DLP + E +Y
Sbjct: 228 -PAHE--------------------GPP------VTVADAIRDLPTLGLTTGSRELEYKG 260
Query: 620 VARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFR 679
+EF + +R + ++DH V +DD RK
Sbjct: 261 AELSEFARAMR-------------HGAPEGCIHDHFTRPVRDDD---------RKAFEL- 297
Query: 680 DLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVV 739
M+ L S +P+ ++ S + RL W+E+ T+
Sbjct: 298 ------------------MDEATLYSK---LPEEMKRYRSDSFDDKYNRLGWNELSRTIT 336
Query: 740 TRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+HP + R LT+RE AR+Q FPD ++ G
Sbjct: 337 AHIAKDGYWYIHPEELRTLTVREAARIQTFPDWFRFAG 374
>gi|116627564|ref|YP_820183.1| site-specific DNA methylase [Streptococcus thermophilus LMD-9]
gi|116100841|gb|ABJ65987.1| Site-specific DNA methylase [Streptococcus thermophilus LMD-9]
Length = 406
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 152/357 (42%), Gaps = 59/357 (16%)
Query: 442 LPG-DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVV 500
+PG D+D + GG PCQG S N RN +ED +N L + VI+ +PK+ + ENV
Sbjct: 62 IPGTDIDVVIGGFPCQGFSIANVKRN----MEDHRNFLYLELLRVIKDKQPKFFVAENVK 117
Query: 501 DILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPL 560
+L G + V S+ Y+ ++ A YG+PQ R RV + G R P +P
Sbjct: 118 GLLSMQKGKVINMIVKDFESLGYKVDYQLLNAAEYGVPQARERVIIIGNRIGIDNP-FPK 176
Query: 561 PTHEIVARGVIPNE-----FQEIIVAYANNQPCQLEKGVLLSDA-ISDLPLVTNNESEDE 614
PTH+ IP+E F E+ A + V L + I+D +V D
Sbjct: 177 PTHK------IPDENELDLFPELPDAITTEEAIGFLADVELQNGKIADHIVV------DG 224
Query: 615 RK-YGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDD----YERVCC 669
RK Y +A T+ + R++ V + ++ D + D Y+
Sbjct: 225 RKIYNHIASTKVEDTFFGRKYQV---NQHEICDYLRYYRDKSDWTTKKIDDYFGYKHTAG 281
Query: 670 IPKRKGANFRDLPGVLVGPDN------KVRWDPSMERVMLK-SGKPLVPDYAMKFEHQSS 722
RK N +P P + +++D ++V+ KP+ + +++ +
Sbjct: 282 HWFRKDNNSGSIP----KPSDWWKLKEILKFDDKYDKVVTTFVEKPIRFEQSLRITN--- 334
Query: 723 TKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
WD +T +T P +H ++ R L+ RE A LQ FPD + +G +
Sbjct: 335 --------WDRPSDT-ITATSPE----IHVNKTRRLSARECAILQTFPDDFVFYGSL 378
>gi|448434340|ref|ZP_21586150.1| DNA-cytosine methyltransferase [Halorubrum tebenquichense DSM
14210]
gi|445685256|gb|ELZ37611.1| DNA-cytosine methyltransferase [Halorubrum tebenquichense DSM
14210]
Length = 392
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 24/170 (14%)
Query: 412 DTWEP--------IKGLSKCKEKLKEFVTKGYRSNILPL---PGDVDFICGGPPCQGVSG 460
D WEP + +E ++E R ++ PG VD + GGPPCQ G
Sbjct: 50 DQWEPAAETYRRNFSDVGFVEEDVRELDAAAIRESVERAGYDPGGVDVVIGGPPCQ---G 106
Query: 461 FNRFRNPQAALE----DIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGG---FLARY 513
F+R N Q L+ D +N F+ V+ L+P+ VLMENV D++ ++
Sbjct: 107 FSRLNNEQIELDEMEKDRRNTLFEEFLRVVSVLEPQLVLMENVRDLINRQTSDDRYVKDL 166
Query: 514 AVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP-QYPLPT 562
V + Y+ ++ A YG+PQ R R+F G + +P ++P PT
Sbjct: 167 IVDEFAAHGYKCEYRVLEAEQYGVPQKRRRIFFMGTD--RDVPIRFPEPT 214
>gi|416403376|ref|ZP_11687522.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 0003]
gi|357261713|gb|EHJ10948.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 0003]
Length = 435
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 124/340 (36%), Gaps = 78/340 (22%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQG S + +LED +N + F+ ++ L+P Y ++ENV ++
Sbjct: 76 IDVVFGGPPCQGFSLMGK-----RSLEDDRNTLVKHFIRLVLELQPNYFVIENVPGMVIG 130
Query: 506 SGGFLARYAVGRLVSMDYQTR--LGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
+YQ + I+ + +YG+PQ R R+FL G++ LP YP
Sbjct: 131 KQQMFLEEIFAEFAQNNYQVKPDYKILNSANYGVPQLRERLFLLGSKKGLNLPNYP---- 186
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVART 623
I Y + L + +AI DLP V + R +
Sbjct: 187 -------------SFITDYTHINDSNLPSTPTVKEAIQDLPEVNQYPELNRRDWVITDYG 233
Query: 624 EFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPG 683
+ Y++ NL A DDY P+
Sbjct: 234 KPSNYVK-------NLRIVSNAI---------------DDY----SYPRHYNKK------ 261
Query: 684 VLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKP---FGRLWWDEIVNTV-- 738
+L S+ER K HQ +P F RL D NT+
Sbjct: 262 LLTSSLRTKHQQKSIER--------------FKETHQGKIEPISRFFRLHPDGFCNTLRA 307
Query: 739 ---VTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
+ R + +HP R +T+RE ARL +PD ++
Sbjct: 308 GTPINRGAHTSPRPIHPFTPRCITVREAARLHSYPDWFRF 347
>gi|111185554|gb|AAI19484.1| Dnmt1 protein [Mus musculus]
Length = 197
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 108 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 165
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLG 528
+ + + + + + LV M YQ G
Sbjct: 166 RNFVSYRRSMVLKLTLRCLVRMGYQCTFG 194
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 255 SPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
+ I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 29 AAIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTV 83
Query: 315 RNEAADDFLSLL 326
E + L L+
Sbjct: 84 FTEDCNVLLKLV 95
>gi|315917412|ref|ZP_07913652.1| cytosine specific DNA methyltransferase [Fusobacterium
gonidiaformans ATCC 25563]
gi|313691287|gb|EFS28122.1| cytosine specific DNA methyltransferase [Fusobacterium
gonidiaformans ATCC 25563]
Length = 358
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 135/337 (40%), Gaps = 82/337 (24%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQG S + +D +N + + E +KP+ V++ENV +L
Sbjct: 80 LDVLVGGPPCQGFSLAGKREE-----DDKRNMLYKAMVKLAERMKPRAVVLENVPGMLTL 134
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
G + + Y+ + ++ A YG+PQ R R F G K+ +P P
Sbjct: 135 YDGAGKKRIFNDFEKLGYKMSVKVLYAPEYGVPQIRKRAFFVGLLNSKEGFTFPEP---- 190
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
I++ N C+ DAI DLP + ++ ++Y +T++
Sbjct: 191 -------------ILSSENFVTCE--------DAIGDLPSLEGIYGDEIQEYECSPQTKY 229
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
Q A+M + LY++ ++ + + +P +G N++ LP
Sbjct: 230 Q---------------AEMRKNSTKLYNNIGTIHSSKTVKMISLVP--EGKNYKALPEEY 272
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPH 745
N +++ ++ R S KP + T+ T + H
Sbjct: 273 ---RNMYKYNEALTRY--HSKKPSL--------------------------TINTGHRSH 301
Query: 746 NRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
H +R+ T+RE+ARLQ FPD + +G E+
Sbjct: 302 ----FHYKYNRIPTVRESARLQSFPDDFIFYGNKSEQ 334
>gi|300866085|ref|ZP_07110814.1| site-specific DNA-methyltransferase [Oscillatoria sp. PCC 6506]
gi|300335911|emb|CBN55972.1| site-specific DNA-methyltransferase [Oscillatoria sp. PCC 6506]
Length = 436
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 132/350 (37%), Gaps = 91/350 (26%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDI-L 503
++D + GGPPCQG S + +LED +N + F+ ++ L PKY ++ENV + +
Sbjct: 79 EIDVVFGGPPCQGFSLIGK-----RSLEDPRNSLVFEFIRLVIELNPKYFVIENVGGMAI 133
Query: 504 KFSGGFLARYAV-----GRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQY 558
F+A G + +YQ I+ A YG+PQ R R+FL G R LP Y
Sbjct: 134 GHHKNFIAEIINEFRENGYQIEENYQ----ILNAAQYGVPQKRERLFLLGCRQDLTLPTY 189
Query: 559 PLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYG 618
P +R +L + DA+ DLP V N
Sbjct: 190 PQAFTHPASR---------------KTSHSELPDSPNVWDALRDLPQVEN---------- 224
Query: 619 TVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANF 678
YI L D V +S DDY + G
Sbjct: 225 ---------YIELLEKDWVEISE--------------------DDYGKA----SDYGKIL 251
Query: 679 RDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKP--------FGRLW 730
R + V DN + + +L S + K E ++TKP F +L
Sbjct: 252 RGISSV----DNDYSYKRIYNKRVLTSSLRTKHNAESK-ERFAATKPGKVEPISRFHKLD 306
Query: 731 WDEIVNTVVTRAQPHNRIL-----LHPSQDRVLTIRENARLQGFPDCYQL 775
+D + NT+ + +HP R +T+RE ARL +PD ++
Sbjct: 307 FDGVCNTLRAGTASNRGAFTSPRPIHPYTPRCITVREAARLHSYPDWFRF 356
>gi|448585611|ref|ZP_21648004.1| DNA-cytosine methyltransferase [Haloferax gibbonsii ATCC 33959]
gi|445726311|gb|ELZ77928.1| DNA-cytosine methyltransferase [Haloferax gibbonsii ATCC 33959]
Length = 404
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 129/334 (38%), Gaps = 83/334 (24%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VD + GGPPCQG F+ +P + D +N + F+D ++ L+P+ L ENV I
Sbjct: 76 VDLVAGGPPCQG---FSEVVSPDGS--DERNHLFVNFIDWVDELEPQAALFENVRGIQNT 130
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
+ G ++ Y ++ + +G+PQ R RV L + L PL E+
Sbjct: 131 AEGKFLDAVNDSFANIGYNVTHRVVTSSDFGVPQHRRRVVLLATK--DSLKHQPLGGFEL 188
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
P + GV+ D I DLP V E E Y +T
Sbjct: 189 --------------------NPVKT-PGVI--DGIGDLPEVGPGEEITE--YDQSPQTVL 223
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
Q + R D L++ Q A + D E + IP G N +P L
Sbjct: 224 QNDL---RGDSDELTAHQAARH------------DADMVEMISHIP--DGGNRTAIPDEL 266
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR--AQ 743
PS SG H S + RL DE +TR ++
Sbjct: 267 ---------QPS-------SGY-----------HNS----YSRLKSDEPA-VAITRNMSK 294
Query: 744 PHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P + +HP Q R LT RE ARLQ FPD Y+ G
Sbjct: 295 PSSARCIHPFQHRGLTPREGARLQTFPDSYRFEG 328
>gi|325270471|ref|ZP_08137073.1| modification methylase DdeI [Prevotella multiformis DSM 16608]
gi|324987194|gb|EGC19175.1| modification methylase DdeI [Prevotella multiformis DSM 16608]
Length = 398
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 121/332 (36%), Gaps = 88/332 (26%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VD I GGPPCQG S + ++D +N+ F+ ++ PK +MENV +IL
Sbjct: 123 VDVIIGGPPCQGFSVAGK-----RIVDDDRNKLYKGFVRMVSCFHPKAFVMENVPNILTI 177
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
G + + + Y+ ++ A YG+PQ R R G + +P PT
Sbjct: 178 GNGVIKESIIKDFSELGYKVSYKVLLASDYGVPQNRRRAIFVGMLDGTEF-VFPSPT--- 233
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
LE V +AISDLP + + +Y ++E+
Sbjct: 234 ------------------------LETPVTCKEAISDLP---EDSLPEGGEYPADPQSEY 266
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
QK +R V Y+H N E + +P G N++DLP L
Sbjct: 267 QKLMREGSDGV---------------YNHEITVHNERTKEIIAMVP--DGGNYKDLPIEL 309
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPH 745
N + + R L S +P + F H
Sbjct: 310 ---QNTRKVHIAWTR--LNSMRPSLTIDTGHFHH-------------------------- 338
Query: 746 NRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
H +RV T RE+AR+Q FPD + G
Sbjct: 339 ----FHYEYNRVPTARESARIQSFPDTFVFIG 366
>gi|384254282|gb|EIE27756.1| S-adenosyl-L-methionine-dependent methyltransferase [Coccomyxa
subellipsoidea C-169]
Length = 788
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 443 PGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV--FMDVIEYLKPKYVLMENVV 500
PG+V + PPCQG++ N RN ++ LL + +E L+P + +E V
Sbjct: 332 PGEVGCMHASPPCQGITVLNNRRNSESLSAPDGLFPLLAEYLVKTVELLQPAFFTLEEVP 391
Query: 501 DILKFS-----GGF-LARYA---VGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
L S GG+ +AR V L+ + YQ + +M A +YG PQ RLRV L+ A+P
Sbjct: 392 SFLAISAKSTDGGWEIARCVWAIVLPLLDLGYQLDVRVMNAANYGTPQSRLRVILFAAKP 451
Query: 552 FKKLPQYPLP-THEIVARGVIP-------------NEFQEIIVAYANNQPCQLEKGVLLS 597
+L P P H +P N ++ I + +++Q +L +
Sbjct: 452 GYRLCHPPKPWNHHTWTYKGLPSLGEDAALLNCQDNRWRHIALT-SDDQAEKLPPALSAK 510
Query: 598 DAISDLPL-VTNNESEDERKYGTVARTEFQKYIR 630
DAI DLP VT + Y + + +F +++R
Sbjct: 511 DAIDDLPADVTAGSKDRVMAYPSGSAGDFARFLR 544
>gi|357458739|ref|XP_003599650.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|357491291|ref|XP_003615933.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355488698|gb|AES69901.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355517268|gb|AES98891.1| Cytosine-specific methyltransferase [Medicago truncatula]
Length = 145
Score = 72.0 bits (175), Expect = 1e-09, Method: Composition-based stats.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 45/177 (25%)
Query: 126 AEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNP 185
E+G YI +I+E+FESVDGE F+RA I ++ VD + F + +
Sbjct: 11 GEKGGESYICKIIEMFESVDGE------LFFRAYICKIIEMFKSVDGELFFRAQWQY-RA 63
Query: 186 LNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNINNESNRRDSDASS 245
+ I +K ++E+++ + K +F+N N + ++
Sbjct: 64 KDTIKNKDILSEISSTVSSHPKVNG----------------KSFMNTNMVNTKK------ 101
Query: 246 TISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHAC 302
PE+ LLDLYSGCG MST LC G LS K+ RWA+++N H C
Sbjct: 102 --------------PELKLLDLYSGCGGMSTDLCQGGLLSSSKM--RWAVNMNEHEC 142
>gi|342732841|ref|YP_004771680.1| cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|342330296|dbj|BAK56938.1| cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
Length = 375
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 122/335 (36%), Gaps = 82/335 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+VD I GPPCQG S + D +N+ + + +++ +PK ++ENV +
Sbjct: 74 EVDVIIAGPPCQGFS-----LTGSRDINDSRNKLYVAVVHAVQHFRPKAFMIENVPGMAT 128
Query: 505 FSGGFLARYAVGRLVSMDYQTRL--GIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
G + + + M Y + + A YG+PQFR R+F G R + P
Sbjct: 129 LYKGAVKQQIINTFEDMGYAVTVTDSPLLAADYGVPQFRKRMFFVGYRKNLGYDYFKFPE 188
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVAR 622
+ A E + +DAISDLP + + + Y +
Sbjct: 189 PLLDA-----------------------EHYIGTADAISDLPSLVDELGSEIMDYINEPQ 225
Query: 623 TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLP 682
+++QK +R+ + N + P +G N +DLP
Sbjct: 226 SDYQKLMRIDSDVIFNHVGTNHTKEVKWVISQVP-----------------EGGNHKDLP 268
Query: 683 GVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA 742
G +++ + R S +P T+ T
Sbjct: 269 ---PGVGESRKFNEAWTRY-------------------HSKRP---------SKTIDTGH 297
Query: 743 QPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ H H +RV T+RENARLQ FPD ++ G
Sbjct: 298 RNH----FHYKWNRVPTVRENARLQSFPDRFKFLG 328
>gi|170739778|ref|YP_001768433.1| DNA-cytosine methyltransferase [Methylobacterium sp. 4-46]
gi|168194052|gb|ACA15999.1| DNA-cytosine methyltransferase [Methylobacterium sp. 4-46]
Length = 423
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 146/376 (38%), Gaps = 101/376 (26%)
Query: 429 EFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEY 488
E + + + ++ L G +D + GGPPCQG S R R+P D +N+ + +++ ++
Sbjct: 70 EALMEAHPDELVNLRGKIDLLAGGPPCQGFSSAGR-RHPG----DPRNQLVERYLEFVDA 124
Query: 489 LKPKYVLMENVVDIL-KFSGGFLARYAVGRLVSMDYQTRLG--------IMAAGSYGLPQ 539
++PK VL+ENV I F+GG A R + D RLG + YG+PQ
Sbjct: 125 IRPKMVLIENVRGITYDFAGGNEAEGR--RNFANDIMCRLGENYHVYADTIRCSEYGVPQ 182
Query: 540 FRLRVFLWGAR------------PFKKLPQYP---LPTHEIVARGVIPNEFQEIIVAYAN 584
R R FL G PF KL L + +R ++ ++A
Sbjct: 183 QRPRFFLVGLLKFEGWEPSRAEDPFAKLQASKVKFLAKRGLCSRMTCKEAISDLERSHAG 242
Query: 585 NQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQM 644
PC KG L +I P RT+FQ+ +R +
Sbjct: 243 TGPCLDSKGYL---SIRTKP----------------PRTDFQRLLR---------DGFEG 274
Query: 645 ASRPSLLYDHRPFQVNNDDYERV---CCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERV 701
+ L HRP + + + R+ C R G + ++R M ++
Sbjct: 275 EISDTRLAQHRPHII--ERFSRIIQECREAGRLGVQL----------NREMRERHGMNKI 322
Query: 702 MLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIR 761
+ P D + T+ + P + LLH S+ R LT+R
Sbjct: 323 ATRVLDP-----------------------DNVAPTITS--MPDD--LLHYSEPRTLTVR 355
Query: 762 ENARLQGFPDCYQLFG 777
ENARLQ FPD + G
Sbjct: 356 ENARLQTFPDWFVFKG 371
>gi|424875357|ref|ZP_18299019.1| DNA-methyltransferase Dcm [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393171058|gb|EJC71105.1| DNA-methyltransferase Dcm [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 499
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 152/379 (40%), Gaps = 57/379 (15%)
Query: 441 PLPGDVDFICGGPPCQGVSGFNRFR------NPQAALEDIKNRQLLVFMDVIEYLKPKYV 494
P+ VD I GGPPCQ + R + +PQA D + R ++ ++ +P V
Sbjct: 89 PVADAVDVIVGGPPCQAFARVGRPKLREIDAHPQAFRHDPRARLYQEYLRYVDAFQPLAV 148
Query: 495 LMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWG-ARPFK 553
L+ENV D+L G +A L Y ++ A +G+PQ R R+FL R
Sbjct: 149 LVENVPDVLNHGGQNIAEEICEVLEDKGYVCGYTLLNAAFFGVPQMRERMFLVAYRREIA 208
Query: 554 KLPQYPLPTHEI-----------VARGVIPNEFQEIIVAYANNQP----CQLEKGVLLSD 598
+P PT+ + VA V+ +E A+ ++P +L V
Sbjct: 209 DRVSFPEPTNWLVLPPGYEGSRAVALKVLNGHLRE---AHDYHEPPTASPELPPAVTAEQ 265
Query: 599 AISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSL------LY 652
A+ DLPL+ E AR F + I R ++ + M S P L
Sbjct: 266 ALGDLPLILAREQLAAGDLRRGAR-RFDQIIPYDRRRKISAYARLMRSWPGFEAPEEGLR 324
Query: 653 DH------RPFQV-----NNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERV 701
DH R + + D Y + + N + KV + S E
Sbjct: 325 DHVIRYLPRDYALFARLNPGDQYPQAW----QHAMNMLSEKIAELQSKGKVVREGSAEYE 380
Query: 702 MLKSGKPLVPDY-AMKFEHQSSTKPFGRLWWDEIVNTVVTR--AQPHNRILLHPSQDRVL 758
L++ +VP Y A KF ++ + ++W D+ T++ ++ I Q R +
Sbjct: 381 RLRAA--IVPPYDATKFPNK-----WRKMWRDQPARTLMAHLGKDSYSHIHYDSEQSRTI 433
Query: 759 TIRENARLQGFPDCYQLFG 777
++RE ARLQ FPD + G
Sbjct: 434 SVREAARLQSFPDGFVFCG 452
>gi|228474527|ref|ZP_04059258.1| site-specific DNA methylase [Staphylococcus hominis SK119]
gi|228271190|gb|EEK12558.1| site-specific DNA methylase [Staphylococcus hominis SK119]
Length = 414
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 161/380 (42%), Gaps = 80/380 (21%)
Query: 431 VTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLK 490
+TK N LP ++D + GG PCQG S N RN ++D +N L + VIE K
Sbjct: 54 ITKIDIKNELPNEEEIDLVIGGFPCQGFSVNNIKRN----MKDKRNFLYLELLKVIELKK 109
Query: 491 PKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR 550
PK+ + ENV +L G + V ++ Y+ ++ A YG+PQ R RV + G R
Sbjct: 110 PKFFVAENVKGLLSMEKGKVIDMIVKDFENLGYEVDYQLLNAADYGVPQARERVIIIGNR 169
Query: 551 PFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNE 610
+ P +P+ +H V P++ Y +++ +L+ V + +AI L
Sbjct: 170 IGVENP-FPVISH------VAPDDNLSFF-DYKSDE--ELKTHVTVEEAIGFL------- 212
Query: 611 SEDERKYGTVARTEFQKYIRLRRHDVVN-LSSAQMASRPSLLYDHRPFQVNNDDYERVCC 669
+ E + G V YI++ + N ++S ++ + + R + VN D +C
Sbjct: 213 GDIEIQNGKV-----NDYIKVNDRKIYNHVASTKVGDK----FFGRKYSVNQHD---ICD 260
Query: 670 IPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRL 729
+ +RD K W + +++ G + + ++ S + P +
Sbjct: 261 YLRF----YRD----------KSEW--TTKKIDEHFGYKHTAGHWFRKDNNSGSIPKPKD 304
Query: 730 WW------------DEIVNTVVTR-------------AQPHNRIL-----LHPSQDRVLT 759
WW D++V T V + +P + I +H ++ R L+
Sbjct: 305 WWELKKILKFDDKYDKVVTTFVEKDIKFEQSLRITNWDRPSDTITATMPEIHVNKTRRLS 364
Query: 760 IRENARLQGFPDCYQLFGPV 779
RE A LQ FPD + +G +
Sbjct: 365 ARECAILQTFPDDFVFYGAL 384
>gi|254456253|ref|ZP_05069682.1| Cytosine-specific methyltransferase HphIA [Candidatus Pelagibacter
sp. HTCC7211]
gi|207083255|gb|EDZ60681.1| Cytosine-specific methyltransferase HphIA [Candidatus Pelagibacter
sp. HTCC7211]
Length = 342
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 132/332 (39%), Gaps = 85/332 (25%)
Query: 447 DFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFS 506
D I GPPCQG S P+ ++D +N+ L + ++ PK ++ENV +
Sbjct: 66 DIIIAGPPCQGFS----ITGPRN-IDDPRNKLYLSVFETLKLTNPKAFVVENVRGLKTMW 120
Query: 507 GGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP-FKKLPQYPLPTHEI 565
GG + + + + S Y ++ + YG+PQ R RVF+ G + K ++P P
Sbjct: 121 GGNVFKEIIKKFESAGYIVTESLLNSADYGVPQIRHRVFIVGIKKELNKKFEFPKP---- 176
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
EF + + + +AI +LP + N E + Y T +
Sbjct: 177 --------EFDK-------------DDYITCGEAIGNLPSLENGELK-SNDYNEKPTTNY 214
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
Q Y+ + S ++ + + L H+ F + + +P +G N++DLP
Sbjct: 215 QMYV---------MDSNKIYNHEATL--HKQFV-----KDTIALVP--EGGNYKDLPK-- 254
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPH 745
G +++ + R S KP T+ T + H
Sbjct: 255 -GVGESRKFNEAWTRY-------------------HSKKP---------SRTIDTGHRNH 285
Query: 746 NRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
H +RV TIRENARLQ F D ++ G
Sbjct: 286 ----FHYKWNRVPTIRENARLQSFKDSFEFLG 313
>gi|295664785|ref|XP_002792944.1| DNA methyltransferase Dim-2 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278465|gb|EEH34031.1| DNA methyltransferase Dim-2 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1371
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 78/149 (52%), Gaps = 10/149 (6%)
Query: 427 LKEFVTKGYRSN-----ILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV 481
+ +F+ + ++ N ++ GDV+FI G PCQG S N + + ++ + + +
Sbjct: 850 VNDFLLRAFQGNTEANDLVAKLGDVEFISAGSPCQGYSSVNSCKENEVSMRN--SSMIAS 907
Query: 482 FMDVIEYLKPKYVLMENVVDILKFSG--GFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQ 539
+++ +PKY ++ENV+ + S L + V M YQ R+ + A S+G PQ
Sbjct: 908 VASYVDFFRPKYAILENVIMMSNRSNKKNPLCQLLCA-FVGMGYQLRILNLDAWSFGAPQ 966
Query: 540 FRLRVFLWGARPFKKLPQYPLPTHEIVAR 568
R R+F++ A P +LP +P TH +++
Sbjct: 967 SRSRLFIFIAAPGLQLPAHPPLTHSHLSK 995
>gi|423486158|ref|ZP_17462840.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus BtB2-4]
gi|423491882|ref|ZP_17468526.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus CER057]
gi|423501326|ref|ZP_17477943.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus CER074]
gi|401153950|gb|EJQ61371.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus CER074]
gi|401158020|gb|EJQ65415.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus CER057]
gi|402439994|gb|EJV71991.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus BtB2-4]
Length = 357
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 129/337 (38%), Gaps = 83/337 (24%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D I GGPPCQG S + RN D +N ++ + + +PK ++ENV +
Sbjct: 75 IDLIIGGPPCQGFSLTGK-RNEN----DERNTLFEAMVNAVAFFQPKAFVLENVPGLATL 129
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
G + ++ Y ++ A YG+PQ R R+F G + ++P P
Sbjct: 130 YQGKAKEAIMKEFETLGYTITYKVLYAPDYGIPQIRKRLFFVGLSNGMEF-EFPEPA--- 185
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
+IP + V DAI DL ++ D +Y + +T +
Sbjct: 186 ----LIPENY------------------VTCEDAIGDLHDFEHDLGTDISEYLNLPKTVY 223
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
QK +R ++ N + H P +N + +P +G N +DLP
Sbjct: 224 QKKMRKYAKNLYNHVGTK----------HTPEVIN-----VISQVP--EGGNHKDLP--- 263
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPH 745
G +++ + R S KP T+ T + H
Sbjct: 264 PGVGESRKFNEAWTRY-------------------HSKKP---------SKTIDTGHRNH 295
Query: 746 NRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
H +RV T+RENARLQ FPD ++ G E+
Sbjct: 296 ----FHYKYNRVPTVRENARLQSFPDDFKFLGNKTEQ 328
>gi|325069024|ref|ZP_08127697.1| modification methylase XorII [Actinomyces oris K20]
Length = 201
Score = 72.0 bits (175), Expect = 1e-09, Method: Composition-based stats.
Identities = 48/133 (36%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 442 LPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVD 501
+P VD + GGPPCQG S + R+ ED +NR + VI+ +PKY ++ENV
Sbjct: 68 IPTGVDVVVGGPPCQGFSTLGK-RDA----EDARNRLWEQYAQVIQRARPKYFVVENVPA 122
Query: 502 ILKFSG--GFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
K FLA G + DY ++ A YG PQ R R L G R +P +P
Sbjct: 123 FGKSPQYRDFLAATGPGEFLE-DYSFDFRVLNAADYGAPQARRRAVLIGHRYDMAVPGFP 181
Query: 560 LPTHEIVARGVIP 572
PTH G +P
Sbjct: 182 EPTHSPDGGGDLP 194
>gi|145593130|ref|YP_001157427.1| DNA-cytosine methyltransferase [Salinispora tropica CNB-440]
gi|145302467|gb|ABP53049.1| DNA-cytosine methyltransferase [Salinispora tropica CNB-440]
Length = 652
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 122/343 (35%), Gaps = 80/343 (23%)
Query: 446 VDFICGGPPCQGVSGFNR------FRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
++ + GGPPCQ S R R+ D + F++VI+ P V+MENV
Sbjct: 119 IELLTGGPPCQPFSRAGRSLIRHQVRHGLRPAHDERRDLWHSFLEVIQLATPAAVIMENV 178
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
D+ F+ R V L S+ Y ++ YG+PQFR R+ L R
Sbjct: 179 PDMALDREMFILRTMVHELESIGYAVEEQVVDTLRYGVPQFRQRLILVALRD-------- 230
Query: 560 LPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYG- 618
A + P ++ V + +AI DLP V + G
Sbjct: 231 ---------------------GVAFDWPPEVPDRVSVWNAIGDLPEVEGGWRPEGGADGW 269
Query: 619 ---TVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
T + FQ+ + R V + + + ++DH V DD + G
Sbjct: 270 SDYTGPASAFQRQM---RQGVAPVDTGK-------VFDHITRPVREDDQRAFDMMD--AG 317
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIV 735
+ +L P+ ++ + RL D
Sbjct: 318 TRYSEL-----------------------------PEDVKRYRDDIFDDKYKRLSEDTYS 348
Query: 736 NTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGP 778
T+ +HP QDR LT+RE ARLQ FPD ++ GP
Sbjct: 349 RTITAHIAKDGYWYIHPRQDRTLTVREAARLQTFPDWFRFAGP 391
>gi|406700893|gb|EKD04053.1| cytosine-specific methyltransferase [Trichosporon asahii var.
asahii CBS 8904]
Length = 513
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 98/231 (42%), Gaps = 25/231 (10%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
G+V + GPPCQ + N R D + + + +I P+ VL+ENV I
Sbjct: 291 GEVSLLVAGPPCQAFTRANHNRK-----VDARGHEPARLLRLISQTLPQLVLIENVPGIK 345
Query: 504 KFSGG-----FLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQY 558
G A V L+ + YQ R ++ A SYG PQ+R R+F+ GA LP++
Sbjct: 346 DRCGSDDVAWNAAEDVVRSLLGLGYQVRWAVLDAASYGAPQYRKRLFVLGAMTGTPLPRF 405
Query: 559 PLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYG 618
P PTH AR E+ ++++ V A+ DLP E K G
Sbjct: 406 PEPTHA-NARPASTIFLGEV---FSSHDGTGAFPPVTAEQAVGDLPAW-------EYKLG 454
Query: 619 TVARTEFQKYIRLRRHDVVNLSS--AQMASRPS-LLYDHRPFQVNNDDYER 666
V + + +RR DV S A+ RP +H + DDYER
Sbjct: 455 GVY-DPLKTEVGMRRCDVGPPRSRYAERLQRPDRRAREHLTVGCSADDYER 504
>gi|60202518|gb|AAX14650.1| BbvCI methyltransferase 1 [Brevibacillus brevis]
Length = 429
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 138/347 (39%), Gaps = 86/347 (24%)
Query: 449 ICGGPPCQGVSGFN-RFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSG 507
+ GGPPCQG S N ++P+ D +N +M + L+PK ++ENV +L
Sbjct: 89 VIGGPPCQGFSHSNVNNKDPK----DPRNSLFQEYMRFVAQLRPKVCMIENVKGLLT--- 141
Query: 508 GFLARYAVGRLV---------SMDYQTRLGIMAAGSYGLPQFRLRVFLWG-----ARPFK 553
+ A G LV S+ Y ++ A ++G+PQFR R+ + A F
Sbjct: 142 ---TKTAKGELVIDIILREFESLGYNADFRVLNAANFGVPQFRERLIIAAVCKSEANNFF 198
Query: 554 KLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
+P PTHE+ I + F+E++ P Q + L +AI D+ +T+
Sbjct: 199 ----WPEPTHEL-GNSNITSLFEELM-------PTQ--PPLTLWEAIGDIQQITHESYTG 244
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCI--- 670
+ Y EFQ +R + P L +H P + ER I
Sbjct: 245 KEGYECSPLNEFQSIMR--------------RNAPEFLLNHEPMKHTKRVVERYATIGFG 290
Query: 671 PKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLW 730
+ + LP K ++ + ++G+ PD +P
Sbjct: 291 ESEGDVSEKHLP-------RKRSESSTISKAYDQNGRRQRPD-----------RP----- 327
Query: 731 WDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+T+V + + +HP R T+RE AR+Q FPD Y+ G
Sbjct: 328 ----CSTIVASSHSN---FIHPFLHRNFTVRELARIQSFPDDYEFRG 367
>gi|398876925|ref|ZP_10632075.1| DNA-methyltransferase Dcm [Pseudomonas sp. GM67]
gi|398203383|gb|EJM90205.1| DNA-methyltransferase Dcm [Pseudomonas sp. GM67]
Length = 501
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 152/380 (40%), Gaps = 72/380 (18%)
Query: 447 DFICGGPPCQGVSGFNRFR------NPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVV 500
D + GGPPCQ + R + +P+A + D + + +++ ++ +P VLMENV
Sbjct: 95 DIVVGGPPCQAFARVGRSKLREIEEHPEAFMHDPRAQLYKKYLEYVDAFQPLAVLMENVP 154
Query: 501 DILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWG-ARPFKKLPQYP 559
DIL G +A L + Y ++ A YG+PQ R R+FL R +P
Sbjct: 155 DILNHGGQNIAEETCEVLEAKGYICGYTLLNAAFYGVPQMRERMFLIAYRRELGASVSFP 214
Query: 560 LPTHEIV-------ARGVIPNEFQEII-VAYANNQPCQ----LEKGVLLSDAISDLPLVT 607
P++ ++ +R V + + A++ +P L V DA+ DLP +
Sbjct: 215 SPSNWLILPPGYEGSRSVALKSLRNLTDQAHSYIEPPAATPDLPPAVTAEDALGDLPAIN 274
Query: 608 NNE-------SEDERKYG---TVARTEFQKYIRLRR----HDVVNLSSAQMASRPSLLYD 653
E + R++ + +R + Y L R H+ R L D
Sbjct: 275 ARELLAAGKITRGARRFDNPVSYSRRKPSAYAELIRTWPGHEAPQNGLVDHVIR-YLPRD 333
Query: 654 HRPFQVNN-------------DDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMER 700
+ F N D ++ + + G N D D S +
Sbjct: 334 YELFARMNPGDQYPEAYAHAMDMFQEHLAVARASGENLAD--------------DSSEYK 379
Query: 701 VMLKSGKPLVPDY-AMKFEHQSSTKPFGRLWWDEIVNTVVTR--AQPHNRILLHPSQDRV 757
+ S +VP Y A KF ++ + ++W D+ T++ ++ I Q R
Sbjct: 380 ALKDS---IVPPYDASKFPNK-----WRKMWRDQPARTLLAHLGKDGYSHIHYDSKQART 431
Query: 758 LTIRENARLQGFPDCYQLFG 777
+++RE ARLQ FPD ++ G
Sbjct: 432 ISVREAARLQSFPDGFRFSG 451
>gi|338812669|ref|ZP_08624837.1| BsaWI methylase [Acetonema longum DSM 6540]
gi|337275331|gb|EGO63800.1| BsaWI methylase [Acetonema longum DSM 6540]
Length = 414
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 141/360 (39%), Gaps = 86/360 (23%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVS-GFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYV 494
R ++L L G +D +CGGPPCQG S G R N D +N + +++ + +KP+ +
Sbjct: 79 RRHLLDLQGKIDIVCGGPPCQGFSVGGMRDGN------DSRNNLPIKYLEFVSLVKPRVI 132
Query: 495 LMENVVDILK--------FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFL 546
+ ENV + + F G FL + V +L + Y I+ A +G+PQ R R+ +
Sbjct: 133 IFENVDGMARPFLSKPSSFKGAFL-DWLVNKLGELGYVAAYKIIDASKFGVPQIRKRLII 191
Query: 547 WGARPFKKLPQYPLPTHEIVARGVIPNEF----QEIIVAYANNQPCQLEKGVLLSDAISD 602
+G + E++ +EF +E+ + + LE V + +A+ D
Sbjct: 192 FGVQ------------KELLDGSKTVSEFFDLMEELRPEFLKEKGLSLEHPVTVFEALED 239
Query: 603 LPLVTNNESEDERKY-GTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNN 661
L D K+ T +T + L R + +L+ HR F +
Sbjct: 240 LNNANRIPCPDSSKFLSTTYKTPQSVFSALMRTGIPDLTVPD---------SHR-FSFHG 289
Query: 662 DDYERVCCIPKRKGANFRDLPGVLV----GPDNKVRWDPSMERVMLKSGKPLVPDYAMKF 717
+ + K R VL+ D KV DP M +
Sbjct: 290 NKTIEFYKMVHEKQMYGRLPKSVLIEYGTKKDKKVLLDPGMPASTI-------------- 335
Query: 718 EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+T P DE V H S+ R++T+RE ARLQ FPD + G
Sbjct: 336 ----TTHP------DEFV---------------HYSEPRIITVREMARLQSFPDNFVFRG 370
>gi|313677760|ref|YP_004055756.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
gi|312944458|gb|ADR23648.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
Length = 346
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 129/333 (38%), Gaps = 87/333 (26%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+VD I GGPPCQG S + ++D +N+ F+ ++Y KPK +MENV +IL
Sbjct: 72 NVDLIVGGPPCQGFSIAGK-----RIIDDERNQLYKSFLRFVDYFKPKGFVMENVPNILS 126
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
G + + + Y+ + A + +PQ R R F G K ++ P
Sbjct: 127 MGNGAVKSQILKDFKDIGYKINYNKLLASDFAVPQNRRRAFFVG---LKNSLEFEFP--- 180
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+P + + +AISDLP + ED +Y ++
Sbjct: 181 ---------------------KPITTDNKITSEEAISDLP---KDSLEDGCQYTINPKSV 216
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
FQ+ +M + ++++H+ + E + +P G N++DLP
Sbjct: 217 FQR---------------EMRNGNKVVFNHQITNHSEKTVEIIGMVP--DGGNYKDLPKE 259
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQP 744
L ++ R ++ L S KP T+ T +
Sbjct: 260 L----HETR-KVNIAWTRLNSKKPSF--------------------------TIDTGHRH 288
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
H H +RV T+RE+AR+Q F D + G
Sbjct: 289 H----FHYEFNRVPTVRESARIQSFRDEFIFCG 317
>gi|119489697|ref|ZP_01622456.1| putative 5-methylcytosine methyltransferase [Lyngbya sp. PCC 8106]
gi|119454434|gb|EAW35583.1| putative 5-methylcytosine methyltransferase [Lyngbya sp. PCC 8106]
Length = 384
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 408 GPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGD-----------------VDFIC 450
G + +E I G+ + K L+ F + +NI+ GD VD IC
Sbjct: 18 GLEQAGFECILGIDQDKASLETFQANHHHANIIC--GDLREITLEDIYEQIDNQTVDLIC 75
Query: 451 GGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFL 510
GGPPCQG S N D +N F+ ++ KP Y++MENV +L +
Sbjct: 76 GGPPCQGFSTIGANDN-----RDKRNFLFFEFLRIVTAFKPDYLIMENVTGLLSRNNEPT 130
Query: 511 ARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR 550
+ + Y + ++AA YG+PQ R R G R
Sbjct: 131 LSLILNSFAELGYTIEVRVLAAHHYGVPQARRRTIFLGNR 170
>gi|156050777|ref|XP_001591350.1| hypothetical protein SS1G_07976 [Sclerotinia sclerotiorum 1980]
gi|154692376|gb|EDN92114.1| hypothetical protein SS1G_07976 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1392
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 149/363 (41%), Gaps = 75/363 (20%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDV-IEYLKPKYVLMEN 498
+P PGDVD I G PCQ GF+R + + ++N+ L+ + I++ +PKY L+EN
Sbjct: 725 IPSPGDVDVILAGSPCQ---GFSRMNMNKGNDQSLRNQSLVASVAAYIDFYRPKYGLLEN 781
Query: 499 VVDILKFSGGF---LARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
V+ + + G + + +V + YQ +L ++ + S+G Q R R+F+ A P
Sbjct: 782 VLTMAQKGLGREEDILSQLICTIVGLGYQVQLFLLDSWSFGSSQARSRIFVSFAAPGFVP 841
Query: 556 PQYPLPTHEIVARGVIPNEFQEIIVAYANNQP------CQLEKGVLLS-DAISDLPLVTN 608
++P +H P+ + + AN Q C L + D+I+DLP + +
Sbjct: 842 LKHPELSHSHP-----PHVGERGLGKLANGQSFGSRIHCPTPFNYLTAEDSIADLPYIGD 896
Query: 609 NESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE-RV 667
+ KY DH Q + Y +V
Sbjct: 897 GATSQCTKYP----------------------------------DHVTPQTLSKMYRFQV 922
Query: 668 CCIPKR-KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYA----MKFEHQSS 722
CIP +G NF W+ + +M K+ + + P + ++ S+
Sbjct: 923 ACIPTHPRGMNFSKT------------WN-NGNGIMTKAERNIFPYFTKSGKVRESVTSN 969
Query: 723 TKPFGRLWWDEIVNTVVTRAQPHNRIL---LHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
++ +GR+ + T++ + + LH Q R LTI E R Q FPD L G
Sbjct: 970 SRAWGRVKPRGLFPTILVTINLEDSRMGNSLHWDQQRRLTIMELRRAQSFPDDEVLVGTR 1029
Query: 780 KER 782
E+
Sbjct: 1030 GEQ 1032
>gi|332710686|ref|ZP_08430629.1| DNA-methyltransferase [Moorea producens 3L]
gi|332350562|gb|EGJ30159.1| DNA-methyltransferase [Moorea producens 3L]
Length = 450
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 137/352 (38%), Gaps = 99/352 (28%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQG S + + ++D++N + F +++ L+P+Y +MENV + +
Sbjct: 98 IDLVIGGPPCQGFSLIGKRQ-----VDDVRNNLVFEFCRLVKELQPRYFVMENVPGLAQN 152
Query: 506 SGGFLARYAVGRLVSMDYQTR--LGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
L + + Y + ++ A +G+PQ R R+FL G+R
Sbjct: 153 KYQHLFEQLISEFKAAGYTITEPVQVLNAADFGVPQKRRRLFLLGSR------------- 199
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVART 623
E VAY +++ + V + DAI+DLP
Sbjct: 200 -----------LGEAPVAYPSSE-LSSHQWVTVKDAIADLP------------------- 228
Query: 624 EFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDL-- 681
+ L++ D V L+ Q+ D + +P + RDL
Sbjct: 229 NLDDFPELQKSDCVELTPEQL------------------DLLQALAMPYVE--KLRDLIT 268
Query: 682 -PGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQ-----SSTKPFGRLWWDEIV 735
PG P +W P + L++ +F + +T RL WD+
Sbjct: 269 DPGNFAYPR---QWHPQLLTSSLQTHH--TEGSIERFRNTPMGEVETTSRLRRLHWDKPC 323
Query: 736 NTV----------VTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+T+ T +P +HP RV+++RE ARL FPD ++ G
Sbjct: 324 HTLRAGTGYKNGRYTSPRP-----IHPDYPRVISVREAARLHSFPDWFRFHG 370
>gi|222149028|ref|YP_002549985.1| DNA methylase [Agrobacterium vitis S4]
gi|221736013|gb|ACM36976.1| DNA methylase [Agrobacterium vitis S4]
Length = 492
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 148/370 (40%), Gaps = 56/370 (15%)
Query: 444 GDVDFICGGPPCQGVSGFNRFR------NPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
G D + G PCQ + R + + A D + R F++ + ++P +++E
Sbjct: 96 GAFDVLAAGLPCQAFARIGRSKLRSVAGDDDAYRNDPRARLYRRFLEYVTAVQPVVIVIE 155
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLP 556
NV DIL F G + L + Y+T ++ + YG+PQ R R+FL R P
Sbjct: 156 NVPDILNFGGHNVPEEICETLDGLGYETSYTLLNSAFYGVPQMRERLFLIAYDRSLGVTP 215
Query: 557 QYPLPTH-----------EIVARGVIP---NEFQEIIVAYANNQPCQLEKGVLLSDAISD 602
+P P+H VA IP + F I V + L V A+SD
Sbjct: 216 TFPHPSHAAELPSGYDGARAVALKFIPETGSHFHPIPVPAED-----LPGAVSTRAALSD 270
Query: 603 LPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNND 662
LP + SE R G++ R + + + R SA+++ + + F+
Sbjct: 271 LPFI----SEHFRDPGSMRRRKLGEQLSYR--------SAEISGYARRMREWPGFESPET 318
Query: 663 DYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLK-SGKPLVPDYA-----MK 716
+ + R FR +P P + E +LK + +P P+ + ++
Sbjct: 319 TDGHLVRLTPRDFPIFRRMPSGADYPRALGIAEQIFEEALLKIAVRP--PNGSEEWNDLR 376
Query: 717 FEHQSSTKP--FGRLWWDEIVNTVVTRA-------QPHNRILLHPSQDRVLTIRENARLQ 767
H P F WW ++ T +R ++ I Q R +++RE ARLQ
Sbjct: 377 ARHVPPYDPGKFPNKWW-KLEPTSPSRTLTAHLGKDSYSHIHWDSRQQRTISVREAARLQ 435
Query: 768 GFPDCYQLFG 777
FPD ++ G
Sbjct: 436 SFPDGFRFAG 445
>gi|334346028|ref|YP_004554580.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1]
gi|334102650|gb|AEG50074.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1]
Length = 418
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 135/346 (39%), Gaps = 76/346 (21%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
D+D + GGPPCQG S P+ L+D +N F VI +KP+ LMENV ++L
Sbjct: 70 DLDLVFGGPPCQGFSQI----GPRDLLDD-RNVLYREFARVIRKIKPRMFLMENVPNLLL 124
Query: 505 FSGGFLARYAVGRLVSMDYQ-TRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
G + + Y T ++A +G+PQ R RVF +G R K P
Sbjct: 125 MQKGHFRDAIMAHFSELGYSNTTYLKVSAADFGVPQTRERVFFFGTRDDIKFP------- 177
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVAR- 622
F+ A A + ++++ V + AI DLP + E Y T+ +
Sbjct: 178 -----------FELQAFAEAFLKGLKVKQPVTVWQAIGDLPANVVHSGETA-AYPTLPKG 225
Query: 623 -TEFQKYIRLRRHDVVNLSSAQMASRPS--------LLYDHRPFQVNNDDYERVCCIPKR 673
T+F K +RL D + A R +L++H ++ + + + +
Sbjct: 226 ATQFLKAMRL---DTAGGPYTKAAKRRRGVGKKDELILHNHHTKEMQAKRAKLISYL--K 280
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDE 733
GA LP + +W + P +P Y +
Sbjct: 281 PGAKADSLPKHIWNGARPEKW---------RRLHPDLPSYTI------------------ 313
Query: 734 IVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFG 777
AQ H + +HP +R +++RE ARLQ F D + G
Sbjct: 314 -------LAQMHRDLSEWVHPKLERWISVREAARLQSFHDGFVFKG 352
>gi|110643908|ref|YP_671638.1| type II 5-cytosoine methyltransferase [Escherichia coli 536]
gi|110345500|gb|ABG71737.1| putative type II 5-cytosoine methyltransferase [Escherichia coli
536]
Length = 315
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
D D + GG PCQG S N RN +D +N+ L F+ V+ KPK+ ENV IL
Sbjct: 62 DCDVVIGGFPCQGFSQANLLRNK----DDERNQLYLEFLRVVNAKKPKFFFAENVRGILS 117
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ-YPLPTH 563
G S+ Y+ + + YG+PQ R RV + G R K+ YP PTH
Sbjct: 118 LDNGTAIEKIESDFKSLGYKVKKQLFNVADYGVPQMRYRVIIVGVRDDIKVEYIYPQPTH 177
Query: 564 E 564
Sbjct: 178 S 178
>gi|433615137|ref|YP_007191934.1| Site-specific DNA methylase [Sinorhizobium meliloti GR4]
gi|429553336|gb|AGA08335.1| Site-specific DNA methylase [Sinorhizobium meliloti GR4]
Length = 504
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 11/134 (8%)
Query: 441 PLPGDVDFICGGPPCQGVSGFNRFR------NPQAALEDIKNRQLLVFMDVIEYLKPKYV 494
P G D I GGPPCQ + R + +P+A D + R + ++ +E P V
Sbjct: 91 PAAGAFDVIVGGPPCQAFARVGRSKLREIAEHPEAFRHDPRARLYIEYLAYVEACAPLAV 150
Query: 495 LMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKK 554
++ENV D+L G LA L S DY R ++ A YG+PQ R R+ L R K+
Sbjct: 151 VIENVPDMLNHGGHNLAAEIGEILASKDYVVRYTLLNAAFYGVPQMRERMILIAIR--KE 208
Query: 555 LP---QYPLPTHEI 565
L ++P PTH I
Sbjct: 209 LADDVEFPAPTHWI 222
>gi|401882061|gb|EJT46335.1| cytosine-specific methyltransferase [Trichosporon asahii var.
asahii CBS 2479]
Length = 569
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 105/247 (42%), Gaps = 27/247 (10%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
G+V + GPPCQ + N R D + + + +I P+ VL+ENV I
Sbjct: 299 GEVSLLVAGPPCQAFTRANHNRK-----VDARGHEPARLLRLISQTLPQLVLIENVPGIK 353
Query: 504 KFSGG-----FLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQY 558
G A V L+ + YQ R ++ A SYG PQ+R R+F+ GA LP++
Sbjct: 354 DRCGSDDVAWNAAEDVVRSLLGLGYQVRWAVLDAASYGAPQYRKRLFVLGAMTGTPLPRF 413
Query: 559 PLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYG 618
P PTH AR E+ ++++ V A+ DLP E K G
Sbjct: 414 PEPTHA-NARPASTIFLGEV---FSSHDGTGAFPPVTAEQAVGDLPAW-------EYKLG 462
Query: 619 TVARTEFQKYIRLRRHDVVNLSS--AQMASRPS-LLYDHRPFQVNNDDYERVCCIPKRKG 675
V + + +RR DV S A+ RP +H + DDYER + +R+
Sbjct: 463 GVY-DPLKTEVGMRRCDVGPPRSRYAERLQRPDRRAREHLTVGCSADDYERQLSLLERR- 520
Query: 676 ANFRDLP 682
F+ P
Sbjct: 521 -RFQGFP 526
>gi|398808843|ref|ZP_10567701.1| DNA-methyltransferase Dcm [Variovorax sp. CF313]
gi|398086852|gb|EJL77459.1| DNA-methyltransferase Dcm [Variovorax sp. CF313]
Length = 429
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 131/338 (38%), Gaps = 64/338 (18%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VD + GGPPCQG S R L+D +N + ++ LKP+ LMENV ++
Sbjct: 92 VDLVFGGPPCQGFSQIGMRR-----LDDERNELYQQYTRIVAKLKPRVFLMENVPNLALM 146
Query: 506 SGGFLARYAVGRLVSMDYQTRLGI-MAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G + + Y + + ++A YG+PQ R RV G R ++L E
Sbjct: 147 NKGHFKHLILKEFADLGYSNTVMLRVSADDYGVPQTRQRVIFVGTRDEEQLNVDLGSLCE 206
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
V G+ ++ + V +++AISDLP + + T T
Sbjct: 207 WVLEGL------------------KVARPVTVAEAISDLPAKIVDSGDVMPYPKTTKLTP 248
Query: 625 FQKYIRLRRHDVVNLSSA-----QMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFR 679
FQK +RL HD + + A + + +L++H ++ + + + G
Sbjct: 249 FQKDMRL-DHDGTHYTKAGKRKRGLGNEQVVLHNHHTKEMQAKRAHLISFL--KPGMKAD 305
Query: 680 DLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVV 739
LP + +W + P +P Y T++
Sbjct: 306 SLPKHIWNGARPEKW---------RRLHPDLPSY-----------------------TIL 333
Query: 740 TRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ +HP +R +T+RE ARLQ F D + G
Sbjct: 334 AQMHRDMSEWVHPHLERWITVREAARLQSFHDGFVFKG 371
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 250 ETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNH 309
E G P P +L L+SGCG G C G SG ++ R A++++ +AC++ + N
Sbjct: 11 EPGKTVPRESPPTAL-SLFSGCG----GFCEGIESSGFEV--RAAVELDKYACETYRHNF 63
Query: 310 PETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKV 344
P TK+ D S L E + F + D V
Sbjct: 64 PRTKLFE---GDVQSFLTEGTDHVESFRVKGVDLV 95
>gi|390961650|ref|YP_006425484.1| hypothetical protein CL1_1491 [Thermococcus sp. CL1]
gi|390519958|gb|AFL95690.1| hypothetical protein CL1_1491 [Thermococcus sp. CL1]
Length = 400
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 138/358 (38%), Gaps = 111/358 (31%)
Query: 423 CKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
K KL+E KG+ +L + GGPPCQG S + R+P D +N + F
Sbjct: 78 IKNKLRE---KGFDDPVL--------VIGGPPCQGFSYAGK-RDPN----DERNNLVWHF 121
Query: 483 MDVIEYLKPKYVLMENVVDILKFS---GGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQ 539
+ ++ L Y +MENV +L G + + R Y+T + ++ A ++ +PQ
Sbjct: 122 LRLVHELDVDYFVMENVSGLLTMKTPEGDSVPEKVLERAEEYGYKTNIKLLNAVNFWVPQ 181
Query: 540 FRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDA 599
R RV + G+ K P + P +I + + D
Sbjct: 182 HRRRVIILGSS--LKAPSHLKPLTKI---------------------------PLTVRDG 212
Query: 600 ISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQV 659
ISDLP T D + Y +Q+ +R+ SR +Y+H P +
Sbjct: 213 ISDLPTPT---PADPQSYAHPPERPYQEVMRV-------------GSR--FIYNHIPTRH 254
Query: 660 NNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEH 719
+ + E++ P PG V P KF+H
Sbjct: 255 SPEMIEKIKNTP----------PGQSVYP---------------------------KFKH 277
Query: 720 QSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ RL W+E + + HN +HP + RV+T RE ARLQ FPD ++ G
Sbjct: 278 S-----WYRLKWNEPAPVM---KENHNAPAVHPEEHRVITPREMARLQSFPDAFRFLG 327
>gi|307153788|ref|YP_003889172.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
gi|306984016|gb|ADN15897.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
Length = 424
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 79/175 (45%), Gaps = 26/175 (14%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
D+D + GGPPCQG S + L+D +N + F+ ++ L PKY ++ENV +
Sbjct: 78 DIDVVFGGPPCQGFSLIGK-----RLLDDPRNDLIYHFLRLVLELNPKYFILENVPGMAL 132
Query: 505 FSGGFLARYAVGRLVSMDYQT--RLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
L + + +Y + I+ A YG+PQ R R+FL G++ LPQYP P
Sbjct: 133 GKHKKLIEEIINKFQENNYNVEENIKILNAAHYGVPQNRERLFLLGSQKGLVLPQYPEPI 192
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKY 617
PN FQ L K + +A+ DLP V + + R +
Sbjct: 193 -------TAPNPFQ------------NLSKTPTVWEALQDLPEVNHYPELETRDW 228
>gi|218895987|ref|YP_002444398.1| modification methylase DdeI [Bacillus cereus G9842]
gi|423371042|ref|ZP_17348382.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus AND1407]
gi|218542827|gb|ACK95221.1| modification methylase DdeI [Bacillus cereus G9842]
gi|401102868|gb|EJQ10853.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus AND1407]
Length = 468
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 139/338 (41%), Gaps = 74/338 (21%)
Query: 449 ICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGG 508
I GGPPCQG S NR Q +D +N F+ ++ + ++ENV +LK
Sbjct: 159 IVGGPPCQGFSNANR----QRLSDDPRNILYKDFIQCVQKSEANLCVIENVPGMLKVENQ 214
Query: 509 FLARYA-VGRLVS-MDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIV 566
+ +A +G ++ + T+ +G PQ R RVF G + T I+
Sbjct: 215 VIQDFADIGFMIKPFPFNTK-------DFGYPQNRNRVFWLGIK-----------TTNII 256
Query: 567 ARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLP-----LVTNNESEDERKYG-TV 620
I N F+ ++ + LE DAI DLP + N+ + + K+G T+
Sbjct: 257 LFNQICNLFESVLYERMYSSDFNLE------DAICDLPPLEAKTLKNSTNIENEKWGYTI 310
Query: 621 ARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRD 680
A Q+ +++N + S L++HR N+ D E I +R
Sbjct: 311 AE---QRIFDSSYSNLLNNGRLE-----SFLFNHRTKYNNDRDIE----IYRR------- 351
Query: 681 LPGVLVGPDNKVRWDPSMERVM-LKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVV 739
+L G + + S++ +M KS + D K E Q +K T+
Sbjct: 352 ---LLPGEKSDAK---SIQDIMPYKSRNEIFKDKFYKLEPQKPSK------------TIT 393
Query: 740 TRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ +HP Q R LT RE AR+QGFPD Y G
Sbjct: 394 AHMYYDCHMYIHPYQARGLTPREAARIQGFPDNYYFLG 431
>gi|341868931|gb|AEK98589.1| domain rearranged methyltransferase 1 [Vitis amurensis]
Length = 137
Score = 71.2 bits (173), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/88 (42%), Positives = 52/88 (59%), Gaps = 7/88 (7%)
Query: 421 SKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLL 480
++ EKL E K R+ LP PG VDFI GGPPCQG SG NRF Q ++ +L
Sbjct: 46 TELAEKLDE---KDIRN--LPRPGQVDFINGGPPCQGFSGMNRFN--QGKWSKMQCEMIL 98
Query: 481 VFMDVIEYLKPKYVLMENVVDILKFSGG 508
F+ +Y +P++ L+ENV + + F+ G
Sbjct: 99 AFLSFADYFRPRFFLLENVRNFVTFNKG 126
>gi|302876802|ref|YP_003845435.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
gi|307687485|ref|ZP_07629931.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
gi|302579659|gb|ADL53671.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
Length = 363
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 131/342 (38%), Gaps = 87/342 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQG S P+ + D +N + + + E L+P+ V++ENV +++
Sbjct: 76 LDVLVGGPPCQGFS----IAGPRD-MNDKRNSLYVAMVKLAERLQPQAVVLENVPGMIQT 130
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
+GG A+ + + Y+ ++ A YG+PQ R RVF G R
Sbjct: 131 NGGIGAKRIIEDFKEIGYRMTPKLLYAPDYGIPQIRKRVFFVGLR--------------- 175
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTN-----NESEDERKYGTV 620
EF E V E V DAI DLP + E+E+ Y +
Sbjct: 176 --NSDTEFEFPEAFV--------DKENYVTSEDAIGDLPSLQTAEGEIIYGEEEQSYISE 225
Query: 621 ARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRD 680
+ +Q+ +R H V N + S P + +P +G N++
Sbjct: 226 PQNAYQRLMRKNSHTVRN----HIGSIPI-----------EKTKRMISLVP--EGKNYKA 268
Query: 681 LPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVT 740
LP G + Y S KP NT+ T
Sbjct: 269 LPEEYQG----------------------IYKYHEALTRYHSKKP---------SNTINT 297
Query: 741 RAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+ H H +R+ T+RE+ARLQ FPD + +G E+
Sbjct: 298 GHRSH----FHYKWNRIPTVRESARLQSFPDDFIFYGNKSEQ 335
>gi|357458741|ref|XP_003599651.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|357491293|ref|XP_003615934.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355488699|gb|AES69902.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355517269|gb|AES98892.1| Cytosine-specific methyltransferase [Medicago truncatula]
Length = 502
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 58/105 (55%), Gaps = 15/105 (14%)
Query: 201 NMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNINNESNRRDSDASSTISSETGSNSPIGQP 260
++D +AK++ IPPCD Y D Y L + LN + + +++ ++T E
Sbjct: 413 DLDFDAKKETIPPCDYYCDTLYLLSYSHLLNFD----QLNTNIANTEKLELKLLDL---- 464
Query: 261 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSL 305
YSGCG MSTGLC G LS K+VTRWA+D+N HAC L
Sbjct: 465 -------YSGCGGMSTGLCQGGMLSISKMVTRWAVDMNEHACMIL 502
>gi|238922582|ref|YP_002936095.1| cytosine-specific methyltransferase [Eubacterium rectale ATCC
33656]
gi|238874254|gb|ACR73961.1| cytosine-specific methyltransferase [Eubacterium rectale ATCC
33656]
Length = 443
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 141/364 (38%), Gaps = 77/364 (21%)
Query: 449 ICGGPPCQGVS--GFNRFRNPQAALEDIKNRQLLVFMDVIEY---LKPKYVLMENVVDIL 503
+ GGPPCQ S G + R+ +IK+ + ++ D + + L+ + V+MENV +
Sbjct: 78 VIGGPPCQAYSMAGRGKLRSLGEDRVNIKDARGYLYQDFLRFVFELEARAVVMENVPEST 137
Query: 504 KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFK-KLPQYPLPT 562
F G + L Y+ I+ + YG+PQ R RVF+ + + K + P PT
Sbjct: 138 NFGGKNIPEIVCTELTKKGYKAYWTILNSADYGVPQVRERVFVVAIKGDEGKEIKLPNPT 197
Query: 563 HEIVARGVIPNEFQEIIVAYA--------NNQPCQLEKGVLLSDAISDLPLVTNNESED- 613
H + + Q+ Y N +L+ V + DA SDLP V
Sbjct: 198 HRNEVD--VLTQHQKRFEGYKQCQFFVEPNGTTDELKPWVTVGDAFSDLPEVFPTADSKY 255
Query: 614 -------ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYER 666
E Y T A+ E+Q+ +R Y F V+ + + R
Sbjct: 256 KLVSLNIEYPYKTEAQNEYQELMR-------------------TWYGKEGFGVSANAFRR 296
Query: 667 VCCIPKRKGANFRDLPGV--LVGPDNKVRWDPSMERVMLKSGK----------------P 708
N RD P + DN + E + + K
Sbjct: 297 ----------NTRDFPIFERMQQGDNYIAATKIAEELFYEEAKLFGYEKDSEEYISLYNK 346
Query: 709 LVPDYAM-KFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQ 767
+VP Y KFE++ + RL + +T+V +HP + R +T+RE ARLQ
Sbjct: 347 MVPQYDKDKFENK-----WKRLDETKPSHTLVAHLAKDTYSHIHPIEPRGITVREAARLQ 401
Query: 768 GFPD 771
FPD
Sbjct: 402 SFPD 405
>gi|428205227|ref|YP_007089580.1| DNA-cytosine methyltransferase [Chroococcidiopsis thermalis PCC
7203]
gi|428007148|gb|AFY85711.1| DNA-cytosine methyltransferase [Chroococcidiopsis thermalis PCC
7203]
Length = 434
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 85/168 (50%), Gaps = 25/168 (14%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL- 503
D+D + GG PCQG S + AL+D +N + F+ ++ LKPKY + ENV +
Sbjct: 77 DIDVVFGGSPCQGFSLIGK-----RALDDPRNALVHHFLRLVLELKPKYFVFENVPGLTI 131
Query: 504 ----KFSGGFLARYAVGRL-VSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQY 558
+F +A + G V DY+ ++ A +YG+PQ R R+FL G R LP+Y
Sbjct: 132 GNHRQFLSELIAAFGAGGYEVKTDYR----VLNAANYGVPQDRARLFLLGCRYGLPLPEY 187
Query: 559 PLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLV 606
P P + + + + + I+ N P L+ + DA+ DLP+V
Sbjct: 188 PQP----ITKPSLSRKSKYIL-----NLP-HLKPTPTIWDALCDLPVV 225
>gi|85094494|ref|XP_959891.1| hypothetical protein NCU02247 [Neurospora crassa OR74A]
gi|13936826|gb|AAK49954.1|AF348971_1 DNA methyltransferase Dim-2 [Neurospora crassa]
gi|28921348|gb|EAA30655.1| predicted protein [Neurospora crassa OR74A]
Length = 1454
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 19/135 (14%)
Query: 425 EKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FM 483
+ L +G S+ +P PG+VDFI G PC GF+ + L +KN+ L+ F
Sbjct: 896 DDLLRLALEGKFSDNVPRPGEVDFIAAGSPC---PGFSLLTQDKKVLNQVKNQSLVASFA 952
Query: 484 DVIEYLKPKYVLMENVVDILK---------FSGGFLARYAVGRLVSMDYQTRLGIMAAGS 534
+++ +PKY ++ENV I++ S F A LV M YQ +L + A +
Sbjct: 953 SFVDFYRPKYGVLENVSGIVQTFVNRKQDVLSQLFCA------LVGMGYQAQLILGDAWA 1006
Query: 535 YGLPQFRLRVFLWGA 549
+G PQ R RVFL+ A
Sbjct: 1007 HGAPQSRERVFLYFA 1021
>gi|307354298|ref|YP_003895349.1| DNA-cytosine methyltransferase [Methanoplanus petrolearius DSM
11571]
gi|307157531|gb|ADN36911.1| DNA-cytosine methyltransferase [Methanoplanus petrolearius DSM
11571]
Length = 421
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 135/338 (39%), Gaps = 68/338 (20%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
DVD I GGPPCQ S R R+P+ +D +N L ++ I+ +P+ + ENV ++
Sbjct: 115 DVDVIIGGPPCQAYSVIGRSRDPERMEKDPRNHLYLHYLHFIQEYQPEVFVFENVPGLIS 174
Query: 505 FSGGFLARYAVGRLVSMDYQT--RLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
G + + + R+ + Y T I+ A +G+ Q R R+ G +KK + P
Sbjct: 175 AKKGTIHKDFLRRIEEIGYYTPPEPHILNARDFGVLQNRKRIIFIG---WKKEHDFEYPN 231
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLP-LVTNNESEDERKYGTVA 621
+ N+ E G ++ D + DLP L ++ + Y V
Sbjct: 232 -------------------FGNH-----ESGYVVWDVLRDLPELEPGTGTDGPQSYKNVR 267
Query: 622 RTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDL 681
+++ +R D S +R + D +++ + +RK ++ +L
Sbjct: 268 PSDYLSEYGIRNSDK---SVRHHIARSHIERDREIYRIAIKLWN-----SERKRLHYNEL 319
Query: 682 PGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR 741
P L+ +N + ++R + G+ L + VV
Sbjct: 320 PKNLITHNNLSSF---LDRFKVVDGEGL-------------------------SHAVVAH 351
Query: 742 AQPHNRILLHP--SQDRVLTIRENARLQGFPDCYQLFG 777
+HP +Q R LT+RE ARLQ FPD Y G
Sbjct: 352 LSRDGHYFIHPDINQARSLTVREAARLQSFPDDYLFEG 389
>gi|350287792|gb|EGZ69028.1| DNA methyltransferase Dim-2 [Neurospora tetrasperma FGSC 2509]
Length = 1416
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 19/135 (14%)
Query: 425 EKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FM 483
+ L +G S+ +P PG+VDFI G PC GF+ + L +KN+ L+ F
Sbjct: 858 DDLLRLALEGKFSDNVPRPGEVDFIAAGSPC---PGFSLLTQDKKVLNQVKNQSLVASFA 914
Query: 484 DVIEYLKPKYVLMENVVDILK---------FSGGFLARYAVGRLVSMDYQTRLGIMAAGS 534
+++ +PKY ++ENV I++ S F A LV M YQ +L + A +
Sbjct: 915 SFVDFYRPKYGVLENVSGIVQTFVNRKQDVLSQLFCA------LVGMGYQAQLILGDAWA 968
Query: 535 YGLPQFRLRVFLWGA 549
+G PQ R RVFL+ A
Sbjct: 969 HGAPQSRERVFLYFA 983
>gi|336467555|gb|EGO55719.1| hypothetical protein NEUTE1DRAFT_67631 [Neurospora tetrasperma FGSC
2508]
Length = 1452
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 19/135 (14%)
Query: 425 EKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FM 483
+ L +G S+ +P PG+VDFI G PC GF+ + L +KN+ L+ F
Sbjct: 894 DDLLRLALEGKFSDNVPRPGEVDFIAAGSPC---PGFSLLTQDKKVLNQVKNQSLVASFA 950
Query: 484 DVIEYLKPKYVLMENVVDILK---------FSGGFLARYAVGRLVSMDYQTRLGIMAAGS 534
+++ +PKY ++ENV I++ S F A LV M YQ +L + A +
Sbjct: 951 SFVDFYRPKYGVLENVSGIVQTFVNRKQDVLSQLFCA------LVGMGYQAQLILGDAWA 1004
Query: 535 YGLPQFRLRVFLWGA 549
+G PQ R RVFL+ A
Sbjct: 1005 HGAPQSRERVFLYFA 1019
>gi|340750922|ref|ZP_08687751.1| DNA-cytosine methyltransferase [Fusobacterium mortiferum ATCC 9817]
gi|229421173|gb|EEO36220.1| DNA-cytosine methyltransferase [Fusobacterium mortiferum ATCC 9817]
Length = 407
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 132/343 (38%), Gaps = 70/343 (20%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
+ +IL ++D I GGPPCQ S R + + D + ++ +E +PK +
Sbjct: 97 KIDILRGNKEIDIIIGGPPCQAYSLIGRAASKSKMVGDSRKYLYKQYLKFLERYRPKLFV 156
Query: 496 MENVVDILKF---SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPF 552
ENV +L +G + V + + Y I+ A +G+PQ R RV + G +
Sbjct: 157 FENVRGMLSSKDENGNNIFEKIVIEMKEIGYNIDYKILDAKDFGVPQSRKRVIIIG---W 213
Query: 553 KKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESE 612
K + P E + + N+ +DLP + E
Sbjct: 214 KNELNFKYPNFETIKNDITINQL------------------------FADLPKIKAGEKI 249
Query: 613 DERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPK 672
+ +K V + E + L D +S Q SRP+ + D + +++ V +
Sbjct: 250 NFKK--IVPQIEVLSKLNLLDDDFNIIS--QHISRPNNINDLKIYKI------AVNLFSE 299
Query: 673 RKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWD 732
K + DLP L+ N + ++R + +G +
Sbjct: 300 GKTLKYTDLPSSLISHKNLTSF---LDRFKVVNG-------------------------N 331
Query: 733 EIVNTVVTRAQPHNRILLHPS--QDRVLTIRENARLQGFPDCY 773
I +T+V +HP Q+R LT+RE AR+Q FPD Y
Sbjct: 332 GISHTMVAHIAKDGHYYIHPDIRQNRSLTVREAARIQTFPDSY 374
>gi|442321096|ref|YP_007361117.1| DNA-cytosine methyltransferase [Myxococcus stipitatus DSM 14675]
gi|441488738|gb|AGC45433.1| DNA-cytosine methyltransferase [Myxococcus stipitatus DSM 14675]
Length = 470
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 22/161 (13%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VD + GGPPCQG S Q ALED +N +L F+ ++ L+ + + ENV +
Sbjct: 74 VDCVFGGPPCQGFSLMG-----QRALEDPRNALVLEFVRLVAELEARTFVFENVKGLTVG 128
Query: 506 SGGFLARYAVGRLVSMDYQTRL--GIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
+ V + Y+ R+ ++ A SYG+PQ R R+ L G R LP+YP PT
Sbjct: 129 NHRRFLDELVRAFDDVGYEARMPWQVLDAASYGVPQHRERLILLGVRKGGTLPRYPAPT- 187
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLP 604
P +++ +VA + C+ +A+ DLP
Sbjct: 188 ------TTPADWERDLVAPPSGPTCR--------EALGDLP 214
>gi|46580156|ref|YP_010964.1| C-5 cytosine-specific DNA methylase [Desulfovibrio vulgaris str.
Hildenborough]
gi|387153409|ref|YP_005702345.1| DNA-cytosine methyltransferase [Desulfovibrio vulgaris RCH1]
gi|46449573|gb|AAS96223.1| C-5 cytosine-specific DNA methylase family protein [Desulfovibrio
vulgaris str. Hildenborough]
gi|311233853|gb|ADP86707.1| DNA-cytosine methyltransferase [Desulfovibrio vulgaris RCH1]
Length = 369
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 5/123 (4%)
Query: 443 PGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDI 502
PG VD I GGPPCQG F+ R A ++D +N LL + + ++ ++P+Y L+ENV +
Sbjct: 83 PGGVDIIMGGPPCQG---FSTHRIKGAGIDDPRNTLLLRYFEYVQAIRPRYFLVENVPGL 139
Query: 503 L-KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQY-PL 560
L +L R+ + + + ++ A YG+PQ R RVF+ G LP + P
Sbjct: 140 LWPRHEEYLQRFYKLATEAGYHVSPPQVLNARDYGVPQNRKRVFILGTAGGHTLPDWPPR 199
Query: 561 PTH 563
PTH
Sbjct: 200 PTH 202
>gi|218900598|ref|YP_002449009.1| modification methylase HaeIII [Bacillus cereus G9842]
gi|218544695|gb|ACK97089.1| modification methylase HaeIII [Bacillus cereus G9842]
Length = 313
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
D D + GG PCQG S N R +++D +N L + VI+ +PK+ + ENV IL
Sbjct: 64 DGDIVIGGFPCQGFSVANMNR----SVDDERNTLYLEMLRVIQDKQPKFFVAENVKGILS 119
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP-QYPLPTH 563
G + + + Y + ++ A YG+PQ R RVF+ G R L YP PTH
Sbjct: 120 LGKGAVIKMICKDFENAGYNVQYKLLNAADYGVPQTRQRVFIVGVRKDLDLTYSYPTPTH 179
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLP 604
E E + N L+K V + +A+SD+P
Sbjct: 180 E---------ESPTFDLFNLN----ALQKWVTIGEALSDIP 207
>gi|168204994|ref|ZP_02630999.1| modification methylase DdeI [Clostridium perfringens E str.
JGS1987]
gi|168212393|ref|ZP_02638018.1| modification methylase DdeI [Clostridium perfringens CPE str.
F4969]
gi|170663374|gb|EDT16057.1| modification methylase DdeI [Clostridium perfringens E str.
JGS1987]
gi|170716088|gb|EDT28270.1| modification methylase DdeI [Clostridium perfringens CPE str.
F4969]
Length = 436
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 130/352 (36%), Gaps = 88/352 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+ I GGPPCQ S R + +D +N + +++ PK + ENV I+
Sbjct: 127 IGLIIGGPPCQAYSLVGRGVMKEKVEDDKRNYLFRYYKQIVKEFSPKMFVFENVPGIITA 186
Query: 506 SGGFLAR----------YAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
G + + YA+ L + R I+ +PQ R RV L+G FKK
Sbjct: 187 KNGQILKAINEEFNEIGYAL--LSGTNECVRDNIVECDLLNIPQNRKRVILFG---FKK- 240
Query: 556 PQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLE-KGVLLSDAISDLPLVTNNESEDE 614
E+ + Y N +L + AISDLP +
Sbjct: 241 ---------------------ELNLHYPNFYKYKLNINDITTKAAISDLP---------K 270
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASR--PSLLYDHRPFQVNNDDYERV--CCI 670
RK GT E +Y + V LS Q R + H+ N+ D E I
Sbjct: 271 RKSGTGEYGEILEYPK-----NVELSKYQSLMRVDSKFVTLHQTRYHNDLDLENYKDAII 325
Query: 671 PKRKGANF--RDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGR 728
+G NF D+P ER K+ K + Y +
Sbjct: 326 KASRGENFTYTDIP---------------KERRTHKNTKSFIDRYKVH------------ 358
Query: 729 LWWDEIVNTVVTRAQPHNRILLHPSQD--RVLTIRENARLQGFPDCYQLFGP 778
WWD+I +T++ +HP D R LT+RE AR+Q FPD Y GP
Sbjct: 359 -WWDDIPHTILAHLSKDGHYNIHPDIDQCRSLTVREAARIQTFPDNYFFEGP 409
>gi|193071751|ref|ZP_03052649.1| DNA-cytosine methyltransferase [Escherichia coli E110019]
gi|192954951|gb|EDV85456.1| DNA-cytosine methyltransferase [Escherichia coli E110019]
Length = 374
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 138/375 (36%), Gaps = 101/375 (26%)
Query: 412 DTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAAL 471
+T+ GL + ++E+ + SN +P + D + GGPPCQG S N+ R
Sbjct: 48 NTYNANFGLHGVQANIEEWAS----SNTVP---EADVVIGGPPCQGFSLLNKNR-----Y 95
Query: 472 EDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL---KFSGGFLARYAVGRLVSMDYQTRLG 528
D + +MDVIE + +MENV +L +F+ ++G ++
Sbjct: 96 GDHRRALWEPYMDVIERSRACMFVMENVPGLLISDEFADITFRAKSMGFILLNPM----- 150
Query: 529 IMAAGSYGLPQFRLRVFLWGAR----PFKKLPQYP-LPTHEIVARGVIPNEFQEIIVAYA 583
++ YG+PQ R R G + +P +P PTH +
Sbjct: 151 VLNTADYGVPQTRKRTIAIGIKRELFDVHSIPAFPPAPTHR------------------S 192
Query: 584 NNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQ 643
++ L + V DAI DLP GT R E +NL +
Sbjct: 193 PDKDVALPEWVCTRDAIGDLPA----------PVGTDIRNELPP---------LNLHFGR 233
Query: 644 MASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVML 703
+ SL ER +P P R L
Sbjct: 234 NPTPVSL--------------ERYKAVP------------------------PGGNRFDL 255
Query: 704 KSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QPHNRILLHPSQDRVLTIRE 762
+ +P + + T FGRLWWD+ T+ T +P LHP +DR +T RE
Sbjct: 256 QKKRPDITPACWLKKKSGGTDLFGRLWWDKPSVTIRTEFFKPEKGRYLHPEEDRPITHRE 315
Query: 763 NARLQGFPDCYQLFG 777
ARL FPD + G
Sbjct: 316 AARLMSFPDNFIFTG 330
>gi|60202519|gb|AAX14651.1| BbvCI methyltransferase 2 [Brevibacillus brevis]
Length = 396
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 134/337 (39%), Gaps = 77/337 (22%)
Query: 446 VDFICGGPPCQGVSGFNRFRNP-QAALEDIKNRQLLVFMDVIEYLKPKYVLMENV--VDI 502
V+ + GGPPCQG S P Q + +N + ++ VI+ ++P+Y ++ENV
Sbjct: 70 VNLVVGGPPCQGFS----VSGPRQYGVYKKENALVAEYIRVIKAVEPEYFILENVRGFTT 125
Query: 503 LKFSGGFLA-RYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLP 561
G A + + L + Y ++ A YG+PQ R R+F+ G+R P +P
Sbjct: 126 ATIEGRIKALNFLLAELREIGYHVYHDVLQAADYGVPQLRSRLFVVGSRHPIANP-FPNK 184
Query: 562 THEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER-KYGTV 620
TH + N L + + +AI DLP++ E D +Y
Sbjct: 185 THSL-------------------NGTQHLRPYLSIMEAIGDLPIINACEGTDNLVQYSLE 225
Query: 621 ARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRD 680
+ +FQ+ +R N S +Y+H + + ER I + G+ ++
Sbjct: 226 PQNDFQQAMR-------NGSLG--------VYNHEAMKHSARIVERFATI-QPGGSGYK- 268
Query: 681 LPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVT 740
G + G D P+ K +Q RL D+ +
Sbjct: 269 -LGTVKGKD--------------------APETVYKSNNQ-------RLISDQPALCITA 300
Query: 741 RAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
Q +HP +R LT+RE AR+Q FPD Y G
Sbjct: 301 NWQSS---YIHPLLNRNLTVREAARIQTFPDSYVFKG 334
>gi|34451616|gb|AAQ72364.1| methylase fusion protein [Geobacillus stearothermophilus]
Length = 1007
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 66/140 (47%), Gaps = 19/140 (13%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAAL---EDIKNRQLLVFMDVIEYLKPKYVLMENVVD 501
DVD ICGGPPCQG S A L +D +N+ F++++ +KPK ++ ENV
Sbjct: 841 DVDIICGGPPCQGFS--------MAGLRLTDDPRNQLFKEFIEIVSRVKPKVIVFENVEG 892
Query: 502 ILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR---PFKKLPQY 558
IL F G + R + + Y T + + Y +PQ R RVF+ R K +
Sbjct: 893 ILSFQSGKVYRAILEMFSEIGYFTEGRTLMSSDYAVPQKRKRVFIICTRDDMDVKPADLF 952
Query: 559 PLPTHE-----IVARGVIPN 573
P P E I AR I +
Sbjct: 953 PTPITEEPECQITARDTIKD 972
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 32/186 (17%)
Query: 593 GVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLY 652
+ L D++S L ++ ES + + E KY R+ V+ ++ M + +
Sbjct: 587 SITLEDSVSILEGQSSIES-----FILQSGVELDKY---TRNIVLGITDKYMKIKKGEIL 638
Query: 653 DHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPD 712
+H F++++ D E + +P G N++D+P + +R+M +
Sbjct: 639 NHTTFKLSDLDLEMIRSVPP--GGNWKDIP---------IETVKKFKRLMRIT------- 680
Query: 713 YAMKFEHQSSTKPFGRLWWDEIVNTVVTR-AQPHNRILLHPSQDRVLTIRENARLQGFPD 771
E T +GR+ +D+ T+ T +P N +HP DRVL++RE AR Q F D
Sbjct: 681 -----ETGGRTTLYGRIDYDKPSYTITTYFNRPGNGTYVHPVHDRVLSVREAARFQCFKD 735
Query: 772 CYQLFG 777
Y +G
Sbjct: 736 DYYFYG 741
>gi|308275289|emb|CBX31885.1| hypothetical protein N47_O13040 [uncultured Desulfobacterium sp.]
Length = 423
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 133/343 (38%), Gaps = 71/343 (20%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
+IL VD I GGPPCQ S R R+ D +N + + + + KPKY L E
Sbjct: 107 DILLRGEKVDLIIGGPPCQAYSLAGRARDKNGMKGDKRNYLYVYYAEFLRRYKPKYFLFE 166
Query: 498 NVVDILKFSGGFLARY--AVGRLVS-MDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKK 554
NV+ +L A Y + +L Y+T I++A YG+ Q R RV L+G R K
Sbjct: 167 NVMGLLSAKDENCALYLSTMKKLFKEQGYETAEKIISANDYGVLQKRKRVILFGNREGKT 226
Query: 555 LPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE 614
G P P + + G+ + + + DLP +
Sbjct: 227 --------------GFFP-------------MPEEWKPGINVEEILKDLPFLKAGT---- 255
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
G+V+ + + Y +D + + + L+ RP V + + R+
Sbjct: 256 ---GSVSPHKLKIYSGNYLYD----AGIRNGNERVTLHIARPHNVQDLEIYRIAV----- 303
Query: 675 GANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSS-TKPFGRLWWD- 732
+W+ R+ +PD ++Q+S T F + D
Sbjct: 304 -----------------KKWNEHRHRLYYHD----LPDNLKTHKNQTSFTDRFKVVAADL 342
Query: 733 EIVNTVVTRAQPHNRILLHP--SQDRVLTIRENARLQGFPDCY 773
+ +TVV +HP Q+R +T RE AR+Q FPD Y
Sbjct: 343 PVSHTVVAHIAKDGHYYIHPDIDQNRSITPREAARMQTFPDDY 385
>gi|392862764|gb|EAS36569.2| DNA (cytosine-5-)-methyltransferase [Coccidioides immitis RS]
Length = 1117
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
Query: 415 EPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDI 474
E +K + +G RS+++ G V+FI G PCQG S N + + +L
Sbjct: 655 EEVKLFRGSVDDFLAVAIRGQRSDLVAKLGQVEFISAGSPCQGYSLANSRKGNKVSL--- 711
Query: 475 KNRQLLVFMDV-IEYLKPKYVLMENVVDILKFSGGFLARYAVGRL----VSMDYQTRLGI 529
+N ++ + +++ +P+Y ++ENV + + R + +L V + YQ RL
Sbjct: 712 RNSSMIASVAAYVDFYRPQYAILENVPAMASKTH---ERNPLSQLICAFVGLGYQLRLMH 768
Query: 530 MAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
+ A SYG PQ R R+FL A P +LP++P TH
Sbjct: 769 LDAWSYGAPQSRSRLFLLIAAPGLQLPEHPALTH 802
>gi|119194775|ref|XP_001247991.1| hypothetical protein CIMG_01762 [Coccidioides immitis RS]
Length = 1040
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
Query: 415 EPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDI 474
E +K + +G RS+++ G V+FI G PCQG S N + + +L
Sbjct: 578 EEVKLFRGSVDDFLAVAIRGQRSDLVAKLGQVEFISAGSPCQGYSLANSRKGNKVSL--- 634
Query: 475 KNRQLLVFMDV-IEYLKPKYVLMENVVDILKFSGGFLARYAVGRL----VSMDYQTRLGI 529
+N ++ + +++ +P+Y ++ENV + + R + +L V + YQ RL
Sbjct: 635 RNSSMIASVAAYVDFYRPQYAILENVPAMASKTH---ERNPLSQLICAFVGLGYQLRLMH 691
Query: 530 MAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
+ A SYG PQ R R+FL A P +LP++P TH
Sbjct: 692 LDAWSYGAPQSRSRLFLLIAAPGLQLPEHPALTH 725
>gi|225560828|gb|EEH09109.1| DNA methyltransferase Dim-2 [Ajellomyces capsulatus G186AR]
Length = 1236
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 9/131 (6%)
Query: 437 SNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLM 496
SN++ GDV FI G PCQG S N + ++++ + + +++ +P+Y ++
Sbjct: 730 SNLVAKLGDVGFISAGSPCQGYSSVNGRKESAVSMQN--SSMIASVASYVDFYRPQYAIL 787
Query: 497 ENVVDILKFSGGFLARYAVGRL----VSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPF 552
ENV+ + S R + +L V M YQ R+ + A S+G PQ R R+F+ A P
Sbjct: 788 ENVIAM---SNRTHERSPLCQLLCTFVGMGYQVRILNLDAWSFGAPQSRSRLFIVIAAPG 844
Query: 553 KKLPQYPLPTH 563
+LP +P TH
Sbjct: 845 LQLPAHPPLTH 855
>gi|24527985|emb|CAD33712.1| putative DNA methylase [Escherichia coli]
Length = 314
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
D D + GG PCQG S N RN +D +N+ L F+ V+ KPK+ +NV IL
Sbjct: 61 DCDVVIGGFPCQGFSQANLLRNK----DDERNQLYLEFLRVVNAKKPKFFFAQNVRGILS 116
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ-YPLPTH 563
G S+ Y+ + + YG+PQ R RV + G R K+ YP PTH
Sbjct: 117 LDNGTAIEKIESDFKSLGYKVKKQLFNVADYGVPQMRYRVIIVGVRDDIKVEYIYPQPTH 176
Query: 564 E 564
Sbjct: 177 S 177
>gi|448513883|ref|ZP_21616814.1| DNA-cytosine methyltransferase [Halorubrum distributum JCM 9100]
gi|448526607|ref|ZP_21619876.1| DNA-cytosine methyltransferase [Halorubrum distributum JCM 10118]
gi|445693036|gb|ELZ45199.1| DNA-cytosine methyltransferase [Halorubrum distributum JCM 9100]
gi|445698834|gb|ELZ50872.1| DNA-cytosine methyltransferase [Halorubrum distributum JCM 10118]
Length = 400
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 76/170 (44%), Gaps = 24/170 (14%)
Query: 412 DTWEPIKGLSKCKEKLKEFVTKGYRSNILPL-----------PGDVDFICGGPPCQGVSG 460
D WEP + EFV + R P P VD + GGPPCQ G
Sbjct: 58 DQWEPAAETYRRNFPDTEFVEEDVRELDAPAIREAVAGAGYDPDGVDVVIGGPPCQ---G 114
Query: 461 FNRFRNPQAALE----DIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGG---FLARY 513
F+R N Q L+ D +N F+ V+ L+P+ VLMENV D++ ++
Sbjct: 115 FSRLNNEQIELDEMEKDRRNTLFEEFLRVVSVLEPQLVLMENVRDLINRQTSDDRYVKDL 174
Query: 514 AVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP-QYPLPT 562
V + Y+ ++ A YG+PQ R R+F G + +P ++P PT
Sbjct: 175 IVDEFAAHGYKCEYRVLEAEQYGVPQKRRRIFFMGTD--RDVPIRFPEPT 222
>gi|419208896|ref|ZP_13752002.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC8C]
gi|419874476|ref|ZP_14396402.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CVM9534]
gi|420101124|ref|ZP_14612254.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CVM9455]
gi|420107297|ref|ZP_14617649.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CVM9553]
gi|425253383|ref|ZP_18646236.1| cytosine-specific methyltransferase [Escherichia coli CB7326]
gi|378057669|gb|EHW19893.1| DNA-cytosine methyltransferase family protein [Escherichia coli
DEC8C]
gi|388350875|gb|EIL16187.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CVM9534]
gi|394413243|gb|EJE87296.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CVM9553]
gi|394418148|gb|EJE91849.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CVM9455]
gi|408185748|gb|EKI11880.1| cytosine-specific methyltransferase [Escherichia coli CB7326]
Length = 372
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 137/375 (36%), Gaps = 101/375 (26%)
Query: 412 DTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAAL 471
+T+ GL + ++E+ + SN +P + D + GGPPCQG S N+ R
Sbjct: 46 NTYNANFGLHGVQANIEEWAS----SNTVP---EADVVIGGPPCQGFSLLNKNR-----Y 93
Query: 472 EDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL---KFSGGFLARYAVGRLVSMDYQTRLG 528
D + +MDVIE + +MENV +L +F+ ++G ++
Sbjct: 94 GDHRRALWEPYMDVIERSRACMFVMENVPGLLISDEFADITFRAKSMGFILLNPM----- 148
Query: 529 IMAAGSYGLPQFRLRVFLWGAR----PFKKLPQYP-LPTHEIVARGVIPNEFQEIIVAYA 583
++ YG+PQ R R G + +P +P PTH +
Sbjct: 149 VLNTADYGVPQTRKRTIAIGIKRELFDVHSIPAFPPAPTHR------------------S 190
Query: 584 NNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQ 643
++ L + V DAI DLP GT R E +NL +
Sbjct: 191 PDKDVALPEWVCTRDAIGDLPA----------PVGTDIRNELPP---------LNLHFGR 231
Query: 644 MASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVML 703
+ SL ER +P P R L
Sbjct: 232 NPTPVSL--------------ERYKAVP------------------------PGGNRFDL 253
Query: 704 KSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QPHNRILLHPSQDRVLTIRE 762
+ +P + + T FGRLWWD T+ T +P LHP +DR +T RE
Sbjct: 254 QKKRPDITPACWLKKKSGGTDLFGRLWWDRPSVTIRTEFFKPEKGRYLHPEEDRPITHRE 313
Query: 763 NARLQGFPDCYQLFG 777
ARL FPD + G
Sbjct: 314 AARLMSFPDNFIFTG 328
>gi|448427452|ref|ZP_21583767.1| DNA-cytosine methyltransferase [Halorubrum terrestre JCM 10247]
gi|445678139|gb|ELZ30633.1| DNA-cytosine methyltransferase [Halorubrum terrestre JCM 10247]
Length = 426
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 76/170 (44%), Gaps = 24/170 (14%)
Query: 412 DTWEPIKGLSKCKEKLKEFVTKGYRSNILPL-----------PGDVDFICGGPPCQGVSG 460
D WEP + EFV + R P P VD + GGPPCQ G
Sbjct: 84 DQWEPAAETYRRNFPDTEFVEEDVRELDAPAIREAVAGAGYDPDGVDVVIGGPPCQ---G 140
Query: 461 FNRFRNPQAALE----DIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGG---FLARY 513
F+R N Q L+ D +N F+ V+ L+P+ VLMENV D++ ++
Sbjct: 141 FSRLNNEQIELDEMEKDRRNTLFEEFLRVVSVLEPQLVLMENVRDLINRQTSDDRYVKDL 200
Query: 514 AVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP-QYPLPT 562
V + Y+ ++ A YG+PQ R R+F G + +P ++P PT
Sbjct: 201 IVDEFAAHGYKCEYRVLEAEQYGVPQKRRRIFFMGTD--RDVPIRFPEPT 248
>gi|359779128|ref|ZP_09282369.1| putative DNA methyltransferase [Arthrobacter globiformis NBRC
12137]
gi|359303577|dbj|GAB16198.1| putative DNA methyltransferase [Arthrobacter globiformis NBRC
12137]
Length = 484
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 146/359 (40%), Gaps = 62/359 (17%)
Query: 449 ICGGPPCQGVS--GFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFS 506
+ GGPPCQ S G +R + + + D K+ ++ +++ KP +MENV +L
Sbjct: 126 LIGGPPCQAYSLAGRSRRKGDETFVSDHKHFLYREYLHILDKFKPTVFVMENVKGLLSSK 185
Query: 507 GG--FLARYAVGRLVSM----DYQTRL--------------GIMAAGSYGLPQFRLRVFL 546
G + + +G L ++ YQ R I+ A YG+PQ R RV L
Sbjct: 186 NGESSMFQTILGDLANLPGGTHYQIRSLVVDADPANLEPSDFIIRAEEYGVPQKRHRVIL 245
Query: 547 WGARP--FKKLPQYPLPTHE--IVARGVIPNEFQEIIVAYANNQP-CQLEKGVLLSDAIS 601
G R ++P+ L + + R + + A ++ +P +L+ + A++
Sbjct: 246 LGVRSDVAPRVPRRILKKADGAVTVRAAL-QTMPSVRAATSSRRPKIELDWQAVQEQALN 304
Query: 602 DLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNN 661
++ L + K GT+A ++ +I D + Q R ++ D ++V
Sbjct: 305 EVRLTEITNKVEPVKSGTLAIDAYESWISEEALD----TPIQHVPRAHMVSDLARYRVMA 360
Query: 662 DDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQS 721
+ + PK + DLP L P++K + + G P + ++
Sbjct: 361 ELAGLLGKSPK-----YTDLPAAL-HPEHKN---------ITREGTPFTDRFRVQV---- 401
Query: 722 STKPFGRLWWDEIVNTVVTRAQPHNRILLHPS--QDRVLTIRENARLQGFPDCYQLFGP 778
WD TVV+ +HP Q R T+RE ARLQ FPD Y GP
Sbjct: 402 ---------WDAPSTTVVSHISKDGHYYIHPDPEQTRSFTVREAARLQSFPDNYFFEGP 451
>gi|448451310|ref|ZP_21592793.1| DNA-cytosine methyltransferase [Halorubrum litoreum JCM 13561]
gi|445810744|gb|EMA60760.1| DNA-cytosine methyltransferase [Halorubrum litoreum JCM 13561]
Length = 400
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 76/170 (44%), Gaps = 24/170 (14%)
Query: 412 DTWEPIKGLSKCKEKLKEFVTKGYRSNILPL-----------PGDVDFICGGPPCQGVSG 460
D WEP + EFV + R P P VD + GGPPCQ G
Sbjct: 58 DQWEPAAETYRRNFPDTEFVEEDVRELDAPAIREAVAGAGYDPDGVDVVIGGPPCQ---G 114
Query: 461 FNRFRNPQAALE----DIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGG---FLARY 513
F+R N Q L+ D +N F+ V+ L+P+ VLMENV D++ ++
Sbjct: 115 FSRLNNEQIELDEMEKDRRNTLFEEFLRVVSVLEPQLVLMENVRDLINRQTSDDRYVKDL 174
Query: 514 AVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP-QYPLPT 562
V + Y+ ++ A YG+PQ R R+F G + +P ++P PT
Sbjct: 175 IVDEFAAHGYKCEYRVLEAEQYGVPQKRRRIFFMGTD--RDVPIRFPEPT 222
>gi|325564165|gb|ADZ31422.1| M.PsuNI [Pseudomonas stutzeri]
Length = 422
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 30/191 (15%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
DVD + GGPPCQG S + L+D +N + ++E L+P+ LMENV ++
Sbjct: 87 DVDLVFGGPPCQGYSQIGTRK-----LDDERNELYKQYARIVETLRPRVFLMENVPNLAL 141
Query: 505 FSGGFLARYAVGRLVSMDYQ-TRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
+ G + + + Y+ T + +++A + +PQ R RV G R K P Y L T
Sbjct: 142 MNKGHFKKIILKHFAELGYKNTIMLLLSADEFSVPQTRQRVIFIGTRDEDKFP-YDLQT- 199
Query: 564 EIVARGVIPNEFQEIIVAYANNQPC-QLEKGVLLSDAISDLP--LVTNNESEDERKYGTV 620
F E ++ C ++E+ V + +AI DLP +V + E+ D K T
Sbjct: 200 -----------FCETVLD------CYRVERAVTVGEAIGDLPADIVHSGETMDYPK--TR 240
Query: 621 ARTEFQKYIRL 631
++F K +RL
Sbjct: 241 NPSQFMKDMRL 251
>gi|240280627|gb|EER44131.1| DNA methyltransferase [Ajellomyces capsulatus H143]
gi|325089115|gb|EGC42425.1| DNA methyltransferase [Ajellomyces capsulatus H88]
Length = 1234
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 9/131 (6%)
Query: 437 SNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLM 496
SN++ GDV FI G PCQG S N + ++++ + + +++ +P+Y ++
Sbjct: 730 SNLVAKLGDVGFISAGSPCQGYSSVNGRKESAVSMQN--SSMIASVASYVDFYRPQYAIL 787
Query: 497 ENVVDILKFSGGFLARYAVGRL----VSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPF 552
ENV+ + S R + +L V M YQ R+ + A S+G PQ R R+F+ A P
Sbjct: 788 ENVIAM---SNRTHERSPLCQLLCTFVGMGYQVRILNLDAWSFGAPQSRSRLFIVIAAPG 844
Query: 553 KKLPQYPLPTH 563
+LP +P TH
Sbjct: 845 LQLPAHPPLTH 855
>gi|226186551|dbj|BAH34655.1| putative modification methylase [Rhodococcus erythropolis PR4]
Length = 444
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 16/156 (10%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
D+D + GGPPCQG S R +D +N + + E +KPK ++MENV +L
Sbjct: 171 DIDVLAGGPPCQGFSLAGRRDR-----DDPRNHLFRNLLQLAELVKPKVLVMENVRLLLS 225
Query: 505 FS---GGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP--QYP 559
GG + +G + + Y + + A YG+PQFR RVF+ R + ++P
Sbjct: 226 MKDPDGGMVVDRILGEMAACGYDASVNTVNAQDYGVPQFRERVFIVATRRDSSIGPLRFP 285
Query: 560 LPTHEIVARGVIP-NEFQEIIVAYA---NNQPCQLE 591
TH + GV P F++ V A + Q C+ +
Sbjct: 286 PKTHGV--NGVAPLRTFRDATVDLAPLESGQACETD 319
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 712 DYAMKFEHQSSTKPFGRLWWDEIVNTV-VTRAQPHNRILLHPSQDRVLTIRENARLQGFP 770
D AM+ +T + RL WDE +TV T +HP R LT+RE ARLQ FP
Sbjct: 349 DPAMRPSSGYNTT-YKRLRWDEPASTVGTTFGMISASRNVHPKHTRSLTVREAARLQTFP 407
Query: 771 DCYQLFG 777
D Y G
Sbjct: 408 DDYVFEG 414
>gi|240142441|ref|YP_002966951.1| Site-specific DNA-methyltransferase [Methylobacterium extorquens
AM1]
gi|240012385|gb|ACS43610.1| Site-specific DNA-methyltransferase [Methylobacterium extorquens
AM1]
Length = 463
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 146/372 (39%), Gaps = 70/372 (18%)
Query: 449 ICGGPPCQGVSGFNRFRNPQAALEDIKNRQ--------LLVF---MDVIEYLKPKYVLME 497
+ GGPPCQ + R A L + RQ +L+F + +E ++P V ME
Sbjct: 81 LVGGPPCQAYARVGR-----AKLRSVAARQNAHLDDPRVLLFRHWLRFVEAIRPHAVAME 135
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP-FKKLP 556
NV+D L G + LVS+ Y R IM A YG+PQ R R FL R P
Sbjct: 136 NVLDCLSVGGRNVMEETAEALVSLGYVPRYTIMNAVHYGVPQMRDRAFLLAYRQDLGVEP 195
Query: 557 QYPLPT--HEIVARGVIPNEFQEIIVAYAN--------NQPCQ-LEKGVLLSDAISDLPL 605
+P PT H++ +G + + A A P L +AI DLP
Sbjct: 196 VFPEPTRAHDL-PKGYLHSRHVATSGAGAAASRFFVPPRHPLSGLPPATTAGEAIGDLPR 254
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
+ +++ K G + E Y R DV + ++ ASR L P +
Sbjct: 255 LAGSKAAGATK-GRRSTGELAAY----RADV---APSEYASR---LRSGGPDGGTSGHVT 303
Query: 666 R------VCCIPKRKGANF--------RDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVP 711
R V C G+ + R L + G R P E L++G +VP
Sbjct: 304 RAIGRDAVLCGLMPSGSEYPAAHAIAERLLSEEIAGRAAMGRPVPDCELPALRAG--IVP 361
Query: 712 DYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPH------NRILLHPSQDRVLTIRENAR 765
H T P WW + + H ++I +Q RV+++RE AR
Sbjct: 362 ------PHPPHTFP--NRWWKLVADRPTRTLLAHLGKDGYSQIHYDDAQGRVISVREAAR 413
Query: 766 LQGFPDCYQLFG 777
LQ FPD ++ G
Sbjct: 414 LQSFPDGFRFEG 425
>gi|238788388|ref|ZP_04632182.1| DNA-cytosine methyltransferase [Yersinia frederiksenii ATCC 33641]
gi|238723634|gb|EEQ15280.1| DNA-cytosine methyltransferase [Yersinia frederiksenii ATCC 33641]
Length = 380
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 123/341 (36%), Gaps = 94/341 (27%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL-- 503
D + GGPPCQG S N+ R D + +MD+IE +MENV +L
Sbjct: 77 ADIVIGGPPCQGFSLLNKKR-----AGDHRRALWEPYMDIIEQSSASIFVMENVQGLLNS 131
Query: 504 -KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP----FKKLPQY 558
+F+ + +G ++ ++ YG+PQ R R+ G + +LP +
Sbjct: 132 EEFADITARAHELGFIL-----LNPSLLNTADYGVPQTRKRIIAIGVKAELFDINQLPAF 186
Query: 559 P-LPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKY 617
P PTH + ++ L V + DAISDLP E E
Sbjct: 187 PPTPTH------------------CSPDKNSALPAWVTVKDAISDLP-----EPE----- 218
Query: 618 GTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGAN 677
GT R DV + P+ L R
Sbjct: 219 GTEIR------------DVPAPLNLHFGRNPTALSQER---------------------- 244
Query: 678 FRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNT 737
+R +P P R L+ +P + + T FGRLWWD T
Sbjct: 245 YRVVP-------------PGGNRFDLQKHRPDITPACWIKKASGGTDLFGRLWWDRPSVT 291
Query: 738 VVTRA-QPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ T +P LHP + R +T RE ARL FPD + G
Sbjct: 292 IRTEFFKPEKGRYLHPEKHRPITHREAARLMSFPDDFIFIG 332
>gi|424756231|ref|ZP_18184063.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424774160|ref|ZP_18201186.1| DNA-cytosine methyltransferase [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421934668|gb|EKT92421.1| DNA-cytosine methyltransferase [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421949804|gb|EKU06718.1| DNA-cytosine methyltransferase [Escherichia coli O111:H11 str.
CFSAN001630]
Length = 374
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 137/375 (36%), Gaps = 101/375 (26%)
Query: 412 DTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAAL 471
+T+ GL + ++E+ + SN +P + D + GGPPCQG S N+ R
Sbjct: 48 NTYNANFGLHGVQANIEEWAS----SNTVP---EADVVIGGPPCQGFSLLNKNR-----Y 95
Query: 472 EDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL---KFSGGFLARYAVGRLVSMDYQTRLG 528
D + +MDVIE + +MENV +L +F+ ++G ++
Sbjct: 96 GDHRRALWEPYMDVIERSRACMFVMENVPGLLISDEFADITFRAKSMGFILLNPM----- 150
Query: 529 IMAAGSYGLPQFRLRVFLWGAR----PFKKLPQYP-LPTHEIVARGVIPNEFQEIIVAYA 583
++ YG+PQ R R G + +P +P PTH +
Sbjct: 151 VLNTADYGVPQTRKRTIAIGIKRELFDVHSIPAFPPAPTHR------------------S 192
Query: 584 NNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQ 643
++ L + V DAI DLP GT R E +NL +
Sbjct: 193 PDKDVALPEWVCTRDAIGDLPA----------PVGTDIRNELPP---------LNLHFGR 233
Query: 644 MASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVML 703
+ SL ER +P P R L
Sbjct: 234 NPTPVSL--------------ERYKAVP------------------------PGGNRFDL 255
Query: 704 KSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA-QPHNRILLHPSQDRVLTIRE 762
+ +P + + T FGRLWWD T+ T +P LHP +DR +T RE
Sbjct: 256 QKKRPDITPACWLKKKSGGTDLFGRLWWDRPSVTIRTEFFKPEKGRYLHPEEDRPITHRE 315
Query: 763 NARLQGFPDCYQLFG 777
ARL FPD + G
Sbjct: 316 AARLMSFPDNFIFTG 330
>gi|418028739|ref|ZP_12667291.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|354691422|gb|EHE91350.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 498
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 145/346 (41%), Gaps = 78/346 (22%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+VD + GGPPCQG S NR Q ++D +N+ +++ + L+PK +MENV +LK
Sbjct: 188 EVDMVAGGPPCQGFSEANR----QRLIDDPRNKLYKYYVESVTALQPKVFVMENVKGMLK 243
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+G L + + Y I+ A ++G+PQ R R+ G R +
Sbjct: 244 VAGQVLEDFNNS---ASHYDIYYKILNARNFGVPQNRERLIYIGIR------------KD 288
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDL-PL----VTNNESEDERKYGT 619
I R +E++ N Q ++ LS+A++ L PL V NN + K G
Sbjct: 289 IADR--YKTSAEEVMNQILNKSGKQGDRP--LSEALAGLRPLEASRVKNNPQLENEKIGY 344
Query: 620 VARTE----FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+ E KY++L D + SL+++H+ + NND
Sbjct: 345 LIDKEEPVYSSKYLQLINPD----------GQESLIFNHKS-RYNND------------- 380
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEI- 734
RD+ + G R +P +S P + D + S F ++ I
Sbjct: 381 ---RDIE--IYG-----RMEPGD-----RSDSPKIADI---MPYTSRKDIFKDKYFKLIP 422
Query: 735 ---VNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
T+ + + +HPSQ R LT RE AR+Q +PD + G
Sbjct: 423 GVPCKTITAHMKFDCNMYIHPSQARGLTPREAARIQSYPDDFFFQG 468
>gi|117620606|ref|YP_855619.1| modification methylase DdeI [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117562013|gb|ABK38961.1| modification methylase DdeI [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 440
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 150/370 (40%), Gaps = 101/370 (27%)
Query: 435 YRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYV 494
++ N+ L G VD I GGPPCQG S + R+P +D +N+ ++DV+ +KPK +
Sbjct: 80 HKGNLSLLAGKVDLIVGGPPCQGFSLAGK-RDP----DDPRNKLAEQYIDVVRLVKPKLL 134
Query: 495 LMENVVDILKFSGGFLARYAVGR--------------LVSMDYQTRLGIMAAGSYGLPQF 540
L+ENV GF ++ GR L + Y ++ + +G+PQ
Sbjct: 135 LLENVR-------GFNTKFTKGRGEGSEPYSKIVKEKLEELGYGVSYKVITSSDWGVPQR 187
Query: 541 RLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEI---IVAYANNQPCQLEKGVLLS 597
R R L + ++ +P+ + N F++I + + N + V
Sbjct: 188 RPRFIL--------IAKFGVPSD-------LFNPFEDIDAFRLNFLNMKGLNSNSPVSAK 232
Query: 598 DAISDLPLV-TNNESEDERKYGTVARTEF-----------QKYIRLRRHDVVNLSSAQMA 645
DAI DL + + N+ + + +T F YI+L R + N
Sbjct: 233 DAIYDLEIFDSKNKKKKLIENTDSGQTGFFELDYKPPKTINNYIKLLRDGLTN------- 285
Query: 646 SRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKS 705
+P+ L R + ++ +E + I + G + N+ R M++ L
Sbjct: 286 EKPNSLRLPRHTKAVSERFELILKICTK---------GTTIC--NEFRDSLKMKKHSL-- 332
Query: 706 GKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENAR 765
PL PD + + P + +LH S+ R+LT+RENAR
Sbjct: 333 -TPLHPD----------------------LPSATVTTLPDD--ILHYSEPRILTVRENAR 367
Query: 766 LQGFPDCYQL 775
LQ FPD +
Sbjct: 368 LQSFPDWFSF 377
>gi|399524187|ref|ZP_10764756.1| DNA (cytosine-5-)-methyltransferase [Atopobium sp. ICM58]
gi|398374672|gb|EJN52247.1| DNA (cytosine-5-)-methyltransferase [Atopobium sp. ICM58]
Length = 429
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 133/342 (38%), Gaps = 73/342 (21%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
++ + GGPPCQG+S R A++D +N L ++ ++ L+P++ LMENV +
Sbjct: 77 EIALVAGGPPCQGISLIGR-----RAIDDPRNALLKEYVRLVLELQPRHFLMENVAGLTV 131
Query: 505 FSGGFLARYAVGRLVSMDYQ--TRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
L + L YQ T ++ A YG PQ R R+ L GAR LP YP P
Sbjct: 132 GKHRHLLTEVIDLLSDGGYQVLTPYRVLQAADYGTPQSRKRLILLGAREDVPLPHYPEPL 191
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQ----LEKGVLLSDAISDLPLVTNNESEDERKYG 618
P + N+P L G ++DA+SD+P + S +E G
Sbjct: 192 -------FTPRPIR--------NKPLPSDPVLPFGPSVNDALSDIP---DAHSINELLEG 233
Query: 619 TVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANF 678
DVV + + A+ + R DDY P+R +
Sbjct: 234 DTTS------------DVVYNTPSDYAA------ELRGITTAADDYSH----PRRFDHS- 270
Query: 679 RDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTV 738
VL + S+ER + + P F RL + I NT+
Sbjct: 271 -----VLTSSNRTNHTSTSIERFNATTPGDVEP-----------VSRFLRLNPEGICNTL 314
Query: 739 VTRAQPHNRILLHP-----SQDRVLTIRENARLQGFPDCYQL 775
P + RV+T+RE ARL G+PD ++
Sbjct: 315 RAGTASDRGAFTAPRPIHPTYPRVITVREAARLHGYPDWFRF 356
>gi|186683211|ref|YP_001866407.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102]
gi|14594714|gb|AAK68647.1| cytosine-specific DNA methyltransferase [Nostoc punctiforme PCC
73102]
gi|186465663|gb|ACC81464.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102]
Length = 421
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 26/170 (15%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL- 503
++D + G PCQG S + ++D +N + F ++ LKPK+ +MENV I
Sbjct: 79 EIDVVICGSPCQGFSLIGK-----RVVDDPRNSLVFHFHRLVFELKPKFFVMENVRGITV 133
Query: 504 ----KFSGGFLARYAV-GRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQY 558
K ++ + + G V +YQ I+ A +YG+PQ R R+FL GAR +LP+Y
Sbjct: 134 GEHKKILQSLISEFKIYGYKVEENYQ----ILNAANYGVPQSRERLFLIGAREDVELPKY 189
Query: 559 PLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTN 608
P P + + +PN ++ P + DAI DLP + N
Sbjct: 190 PQP----ITKPALPNNLTSKKISNIPLSPT-------VWDAIKDLPEIEN 228
>gi|402553563|ref|YP_006594834.1| site-specific DNA methylase [Bacillus cereus FRI-35]
gi|401794773|gb|AFQ08632.1| site-specific DNA methylase [Bacillus cereus FRI-35]
Length = 430
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 442 LPG-DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVV 500
+PG DVD + GG PCQG S N + ++ED +N L + +++ KPK+ + ENV
Sbjct: 63 IPGEDVDVVIGGFPCQGFS----VANTKRSMEDKRNFLYLELLRIVKDKKPKFFVAENVK 118
Query: 501 DILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPL 560
+L S G + + Y ++ A YG+PQ R RV + G R F YP
Sbjct: 119 GLLSMSKGKVIEMIKNDFEKLGYTVEYRVLNAADYGVPQLRERVIIIGNR-FGIQNPYPE 177
Query: 561 PTHEIV 566
TH+ +
Sbjct: 178 KTHKFM 183
>gi|427738987|ref|YP_007058531.1| DNA-methyltransferase Dcm [Rivularia sp. PCC 7116]
gi|427374028|gb|AFY57984.1| DNA-methyltransferase Dcm [Rivularia sp. PCC 7116]
Length = 429
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
++D + GG PCQG S + AL+D +N + F+ +I L+PKY + ENV +
Sbjct: 72 EIDVVFGGSPCQGFSMMGK-----RALDDPRNSLVFHFLRLILELQPKYFVFENVPGLTV 126
Query: 505 -----FSGGFLARYAV-GRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQY 558
F +A + G V +YQ ++ A +YG+PQ R R+F++G R LP+Y
Sbjct: 127 GEHRIFLSTVIAEFEKNGYRVEANYQ----VLNAANYGVPQDRARLFIFGCRQGLNLPKY 182
Query: 559 PLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER--- 615
P P + A + Y N P L + DAI DLP V N ER
Sbjct: 183 PQP---LTAPKISKKS------KYIVNNP-DLPATPTVWDAICDLPEVENYSELIERDWV 232
Query: 616 --KYG 618
KYG
Sbjct: 233 IAKYG 237
>gi|423257754|ref|ZP_17238677.1| DNA (cytosine-5-)-methyltransferase [Bacteroides fragilis
CL07T00C01]
gi|423265279|ref|ZP_17244282.1| DNA (cytosine-5-)-methyltransferase [Bacteroides fragilis
CL07T12C05]
gi|387778122|gb|EIK40218.1| DNA (cytosine-5-)-methyltransferase [Bacteroides fragilis
CL07T00C01]
gi|392702937|gb|EIY96081.1| DNA (cytosine-5-)-methyltransferase [Bacteroides fragilis
CL07T12C05]
Length = 408
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 144/378 (38%), Gaps = 100/378 (26%)
Query: 420 LSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVS-GFNRFRNPQAALEDIKNRQ 478
LS + E + K Y+ + L G +D + GGPPCQG S R N D +N+
Sbjct: 61 LSISNHDINEVLDK-YQEELKGLQGTIDLVAGGPPCQGFSMAGKRVEN------DTRNQL 113
Query: 479 LLVFMDVIEYLKPKYVLMENVVDILKFSGGF----------LARYAVGRLVSMDYQTRLG 528
+ ++ I+ +KPK +L ENV F+ F + + L + Y +
Sbjct: 114 VFSYIQFIKLVKPKMILFENVKG---FTFAFNKKTNKDAIPYSEVVINELKELGYNVKPH 170
Query: 529 IMAAGSYGLPQFRLRVFLWG-----ARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYA 583
I+ YG+PQ R R L G A F+ L +E+ Y
Sbjct: 171 IIDFSKYGVPQRRKRFILVGIMGGNAENFEAL-------------------LEELKTDYL 211
Query: 584 NNQPCQLEKGVLLSDAISDLPLVTNNESEDERK------YGTVARTEFQKYIRLRRHDVV 637
NN+ +E V L D+ISDL +RK YG + + +Q+ +R +
Sbjct: 212 NNK--GIESFVSLQDSISDLFQQNGEVPTPDRKGFNSGIYGDI-NSNYQRMMR------I 262
Query: 638 NLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPS 697
+ S + S + H F + C P + G + + +W+
Sbjct: 263 GIDSKNIPDSHSFAH-HNSF-TQKVFANLIACYPTK---------GKRITNKEREQWNIK 311
Query: 698 MERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRV 757
+ L +G D++ T+ + H +H ++ R+
Sbjct: 312 KRGLTLLNG-------------------------DDVSPTLTS----HPDDYIHYAEPRI 342
Query: 758 LTIRENARLQGFPDCYQL 775
LT+RE AR+Q FPD YQ
Sbjct: 343 LTVREYARIQSFPDWYQF 360
>gi|427723401|ref|YP_007070678.1| DNA-cytosine methyltransferase [Leptolyngbya sp. PCC 7376]
gi|427355121|gb|AFY37844.1| DNA-cytosine methyltransferase [Leptolyngbya sp. PCC 7376]
Length = 401
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 140/354 (39%), Gaps = 91/354 (25%)
Query: 443 PGDVDFICGGPPCQGVS--GFNRFRNPQAALEDIKNRQLLV--FMDVIEYLKPKYVLMEN 498
P +VD + GGPPCQ S G + ++ + +R L ++ ++Y +P + +MEN
Sbjct: 75 PREVDILIGGPPCQVFSRVGLGKMKHDLKWDIEKDHRNFLYKEYVRFVDYYQPFFFVMEN 134
Query: 499 VVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP-FKKLPQ 557
V ++ + L + L + Y+ ++ + +G+PQ R R+FL G R P
Sbjct: 135 VDNLA--NKKELLSTILDELAACGYKVEYEVLDSSKFGVPQRRRRIFLIGVRSDLLWEPI 192
Query: 558 YPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLP------LVTNNES 611
+P P+ +K + DAISDLP L ++S
Sbjct: 193 FPKPSG---------------------------QKAFSVGDAISDLPELKPIILSLKSKS 225
Query: 612 EDERK------YGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
R+ Y + +Q+ ++RRH+ + R L H N+ D E
Sbjct: 226 RGPRQKDCDLLYRGEPESIYQQ--KMRRHNGDRV-------RNHLCRAH-----NDKDLE 271
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKP 725
+ ++G +RDL P+ M++
Sbjct: 272 IFKTL--KQGGKYRDL-----------------------------PEEMMRYRVDIFDDK 300
Query: 726 FGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
+ RL+WD+ T+ + +HP Q R +++RE AR+Q FPD + P+
Sbjct: 301 YHRLYWDKPSWTLTAHMRKDCLAYIHPLQTRSISVREAARIQSFPDNFVFQAPM 354
>gi|226945654|ref|YP_002800727.1| C-5 cytosine-specific DNA methylase [Azotobacter vinelandii DJ]
gi|226720581|gb|ACO79752.1| C-5 cytosine-specific DNA methylase [Azotobacter vinelandii DJ]
Length = 501
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 155/373 (41%), Gaps = 67/373 (17%)
Query: 447 DFICGGPPCQGVS--GFNRFRNPQAALEDIKN--RQLLV--FMDVIEYLKPKYVLMENVV 500
D + G PCQ + G ++ R+ + KN R L F+++++ +P +L+ENV
Sbjct: 110 DVLAAGLPCQAFARIGRSKLRSVTGDEDAFKNDPRASLYRRFLEIVDETRPLAILVENVP 169
Query: 501 DILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA-RPFKKLPQYP 559
DI+ F G + L Y TR ++ A YG+PQ R R+FL +PQ+P
Sbjct: 170 DIMNFGGHNVPEEIAEGLRVRGYVTRYTLLNAAFYGVPQLRERLFLVAVDATLDVIPQFP 229
Query: 560 LPTHEI-------VARGVIPNEFQEIIVAYA--NNQPCQLEKGVLLSDAISDLPLVTNN- 609
PTH + +R V +++ ++ + L + A++DLP ++++
Sbjct: 230 SPTHFMELPRGYESSRAVALKHVKDVGSHFSPIPSPAGGLPSSIGTESALADLPFISDHL 289
Query: 610 -ESEDERKYGTVARTEFQK------YIRLRRHDVVNLSSAQMASRPSLLYDHRPFQV--- 659
++ RK + +++ Y L R D S+++ S + R F +
Sbjct: 290 RDTAIIRKRKVADKLPYREGITPSTYAHLMR-DWPGFSASENVSGNVVRITTRDFPIFGR 348
Query: 660 --NNDDYERVCCIP------KRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVP 711
DY I K + NF PG +R+ ++E K +P
Sbjct: 349 MPRGADYPVALRIAQQLLEEKLQRENFPPRPGT-------IRYK-ALE-------KATIP 393
Query: 712 DY-AMKFEHQSSTKPFGRLWW----DEIVNTVVTR--AQPHNRILLHPSQDRVLTIRENA 764
Y A KF ++ WW D T+ ++ I Q R++++RE A
Sbjct: 394 PYDASKFPNK---------WWKLDPDAPSRTLTAHLGKDTYSHIHYDGRQKRMISVREAA 444
Query: 765 RLQGFPDCYQLFG 777
RLQ FPD ++ G
Sbjct: 445 RLQSFPDGFEFAG 457
>gi|443476547|ref|ZP_21066447.1| DNA-cytosine methyltransferase [Pseudanabaena biceps PCC 7429]
gi|443018456|gb|ELS32699.1| DNA-cytosine methyltransferase [Pseudanabaena biceps PCC 7429]
Length = 425
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 132/349 (37%), Gaps = 91/349 (26%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL- 503
+VD + GGPPCQG S + A +D +N + FM ++ L KY +MENV +
Sbjct: 75 EVDVVFGGPPCQGFSLMGK-----RAFDDPRNELVSHFMRIVTELNAKYFVMENVKGLTV 129
Query: 504 ----KFSGGFLARYAV-GRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQY 558
KF + + G V +Y+ ++ A +G+PQ R R+FL G R LP Y
Sbjct: 130 GNHRKFLDEVIDSFEQNGYKVLQNYK----VLNAAHFGVPQHRERLFLIGCRQDVHLPNY 185
Query: 559 PLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYG 618
P P + I E ++ N P E AI+DL + + + + +
Sbjct: 186 PAPITKPAKAKRIAKELIDL-----PNSPTVYE-------AIADLQDIAQHPALLNQDFC 233
Query: 619 TVARTEFQKYIRL------------RRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYER 666
T + KY+ L R+H+ N+ ++ + S+ +R + ER
Sbjct: 234 TATISGSSKYVELINDFGKANFGYKRKHN-ANILTSSLMSKHGESSKYRFRNTAQGEVER 292
Query: 667 VCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPF 726
+ K DL G+ N +R R + +P
Sbjct: 293 ISRFYK------LDLNGI----SNTLRAGTPSNRGAFTAPRP------------------ 324
Query: 727 GRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
+HP+ R +T+RE ARL +PD ++
Sbjct: 325 -----------------------IHPNSPRCITVREAARLHSYPDWFRF 350
>gi|456737726|gb|EMF62403.1| Putative DNA (cytosine-5-)-methyltransferase protein
[Stenotrophomonas maltophilia EPM1]
Length = 590
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 21/184 (11%)
Query: 447 DFICGGPPCQGVSGFNRFR------NPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVV 500
D + GGPPCQ + R + +P+A + D + + +++ ++ +P VLMENV
Sbjct: 186 DIVVGGPPCQAFARVGRSKLREIEEHPEAFIHDPRAQLYKKYLEYVDAFQPVAVLMENVP 245
Query: 501 DILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWG-ARPFKKLPQYP 559
D+L G +A L S Y ++ A YG+PQ R R+FL R +P
Sbjct: 246 DMLNHGGQNIAEETCEVLESKGYTCGYTLLNAAFYGVPQMRERMFLMAYRRELNATVSFP 305
Query: 560 LPTHEIV-------ARGVIPNEFQEII------VAYANNQPCQLEKGVLLSDAISDLPLV 606
PTH +V +R V + + +A P L V +DA++D+P +
Sbjct: 306 KPTHYLVLPPGYEGSRSVALKTLRNLFDGAHSYIAPPAASP-DLPPAVTAADALADMPSI 364
Query: 607 TNNE 610
E
Sbjct: 365 NARE 368
>gi|160883583|ref|ZP_02064586.1| hypothetical protein BACOVA_01555 [Bacteroides ovatus ATCC 8483]
gi|423291618|ref|ZP_17270465.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus CL02T12C04]
gi|156110996|gb|EDO12741.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus ATCC 8483]
gi|392662741|gb|EIY56297.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus CL02T12C04]
Length = 417
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 146/380 (38%), Gaps = 83/380 (21%)
Query: 414 WEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALED 473
W PIK + + + Y + L +D + GGPPCQG S R + +D
Sbjct: 62 WLPIKNWEI------DTLLENYSFQLSNLRNKIDLVAGGPPCQGFSMAGRRKE-----DD 110
Query: 474 IKNRQLLVFMDVIEYLKPKYVLMENVVDIL------KFSGGFLARYAVGRLVSMDYQTRL 527
++N + ++ IE + PK + ENV K G + V L + Y+T
Sbjct: 111 VRNHLVHSYIKFIELVHPKMLFFENVKGFTQEFKKNKEKGIAYSHLVVEELEKLGYRTAS 170
Query: 528 GIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQP 587
++ G YG+PQ R R L G L + + + Q + +
Sbjct: 171 QLVNFGDYGVPQKRTRFILVG------LSESFFGASAKCKAELFFTQLQNARFDFLKAK- 223
Query: 588 CQLEKGVLLSDAISDL----PLVTNNESEDER--KYGTVARTEFQKYIRLRRHDVVNLSS 641
L G LS+AISDL +V +NE R KY ++ T +QK++R VN+
Sbjct: 224 -GLRTGTTLSEAISDLLMSKGIVIDNEYTHFRFGKYNSIPLTAYQKFMR----SNVNIKG 278
Query: 642 AQMASRPSLLYDHRPFQVNNDDYERVCCI----PKRKGANFRDLPGVLVGPDNKVRWDPS 697
S HR NN+ +R + KR+ +N D
Sbjct: 279 PHPDS-------HRFANHNNNIIQRFQLLLDLTKKRRCSNI----------------DNE 315
Query: 698 MERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRV 757
++R + ++P L ++ T+ T + +H + R+
Sbjct: 316 IKRHFHINKHTIIP-----------------LDGNQKAPTITTLPDDY----IHYCEPRI 354
Query: 758 LTIRENARLQGFPDCYQLFG 777
LT+RE AR+Q FPD + G
Sbjct: 355 LTVREYARIQSFPDDFIFKG 374
>gi|79835453|gb|ABB52085.1| Mod [Arthrospira platensis]
gi|291569776|dbj|BAI92048.1| type II DNA modification methyltransferase [Arthrospira platensis
NIES-39]
Length = 429
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 126/333 (37%), Gaps = 63/333 (18%)
Query: 448 FICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSG 507
I GG PCQG S N+ + + +D +N + + L+P+ +++ENV +++K
Sbjct: 110 IILGGIPCQGFSICNQNKGDR---QDSRNYMFQDLIRISSLLQPEIIIIENVPNLIKAKT 166
Query: 508 G---FLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ + +L + YQ I+ A YG+PQ R R+F+ R P +P PTH
Sbjct: 167 TNRQLVIDLIMSKLRHLGYQVNYQILNATDYGIPQVRKRLFILAHRCDLTHP-FPQPTHT 225
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+ + + +N L+K L +AISDLP + E +E +Y E
Sbjct: 226 TSNQTEL----------FTHN----LKKCPSLWEAISDLPDIDAGEGAEEMEYNKCPDHE 271
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q+ +R V N + + + R + + + D KR F D
Sbjct: 272 YQQILRNGSDRVFNHKAMKHSQRLVQRFASMGWGDSTSDVPNHLRPLKRNSHQFSD---- 327
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQP 744
+ N R P K + + F H
Sbjct: 328 KIYDQNNRRMSP------YKPCNTIPASFYANFVH------------------------- 356
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P ++R T RE AR+Q FPD Y G
Sbjct: 357 -------PYKNRNFTAREGARIQSFPDWYVFKG 382
>gi|317127845|ref|YP_004094127.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522]
gi|315472793|gb|ADU29396.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522]
Length = 363
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 130/333 (39%), Gaps = 87/333 (26%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
++ I GGPPCQG S + D +N L + V++ + PK+ ++ENV +L
Sbjct: 72 IEGIIGGPPCQGFSTVG-----TRDINDERNHLYLEYFRVVKEVMPKFFVIENVKGLLTL 126
Query: 506 SGGFLARYAVGRLVSMDYQ-TRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ G + R ++ Y+ + ++ A YG+PQ R RVF G ++P +E
Sbjct: 127 NKGMFKEDIMDRFGNLGYRISEPQVLNAADYGVPQHRHRVFFVGV--LDGAFEFPRKKNE 184
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+++ DA+SDLP + E D E
Sbjct: 185 VIST----------------------------KDALSDLPSLEKFEGSD---------VE 207
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
F+ +++ + NL M ++ +H + N+ D G + +DLP
Sbjct: 208 FEYHVKPQ-----NLYQTFMRENSDIILNHN--KTNHTDQTIDIISMVGDGGSIKDLP-- 258
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQP 744
P+ W+ + Y F+ +S P +T+ T
Sbjct: 259 ---PE---YWN--------------IRKYNKAFQRMNSNLP---------SHTIDTG--- 286
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+R H ++RV ++RE AR+Q FPD + G
Sbjct: 287 -HRNYFHYEENRVPSVRECARIQSFPDDFVFLG 318
>gi|381179821|ref|ZP_09888668.1| DNA-cytosine methyltransferase [Treponema saccharophilum DSM 2985]
gi|380768299|gb|EIC02291.1| DNA-cytosine methyltransferase [Treponema saccharophilum DSM 2985]
Length = 415
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 136/350 (38%), Gaps = 80/350 (22%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP D D +CGGPPCQG S NR Q ++D +N+ ++ ++ ++PK+ +MENV
Sbjct: 105 LPRFKDADLVCGGPPCQGFSMANR----QRIIDDPRNQLYKEYLKLLSVVRPKFFIMENV 160
Query: 500 VDILK----FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ K F + S + + L + A +G+PQ R R + G R
Sbjct: 161 RGMSKKWEEIKENFETYLNANQKESYQFSSHL--LYAEDFGVPQHRERFIVVGNR----- 213
Query: 556 PQYPLPTHEIVARGVIPNE-FQEIIVAYANNQPCQLEKGVLLSDAISDLP------LVTN 608
G+ P F EI + +K +L +A+ LP +
Sbjct: 214 ------------LGINPEAVFDEIFKS--------KQKPFVLKNALEGLPKLGTKKIKGK 253
Query: 609 NESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVC 668
N ED T E+ + +D + + + LY+H+ N D E
Sbjct: 254 NNVEDSDTGFTECDFEYTE------NDFYHFINGN--KKLHKLYNHKNRYNNPRDIEIYT 305
Query: 669 CIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVM-LKSGKPLVPDYAMKFEHQSSTKPFG 727
+P +GAN S+ +M KS + D K E
Sbjct: 306 RLP--QGAN---------------SLHESIADIMPYKSRNDIFKDKYFKLEE-------- 340
Query: 728 RLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
D+I T+ + + + +HP R L+ RE AR+Q FPD Y +G
Sbjct: 341 ----DKICKTITSHMRFDCNMYIHPWCSRGLSPREAARIQTFPDDYIFYG 386
>gi|374288615|ref|YP_005035700.1| cytosine-specific DNA methylase [Bacteriovorax marinus SJ]
gi|301167156|emb|CBW26735.1| modification methylase (cytosine-specific DNA methylase)
[Bacteriovorax marinus SJ]
Length = 383
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 132/334 (39%), Gaps = 84/334 (25%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
V + GGPPCQG S NP +D++N L F +++ P +V++ENV +L
Sbjct: 74 VHVVVGGPPCQGFSTVG-LGNP----DDMRNTLFLEFCRIVKTTMPYFVVIENVTGLLAK 128
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
+ + S+ Y+ + +M++ +YG+P+ R R L G+R +
Sbjct: 129 KNEKTLQNIFKKFRSLGYEMDVQVMSSQNYGVPEKRRRTILIGSR--------------V 174
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEF 625
V P + ++A P + + DA+ +L E K G
Sbjct: 175 NCDIVFPKHTHDTVMAKTFRPP------MTVGDALENL----------ETKKG------- 211
Query: 626 QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVL 685
+L HD L A + S+ D +R+ IP+ KG ++
Sbjct: 212 ----KLYNHD---LEQAMIKSKI--------------DLKRLKRIPEGKGIRYQ------ 244
Query: 686 VGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPH 745
D K PS++ L D+ E++ + RL T++T H
Sbjct: 245 --ADEKKYLTPSLK---------LGVDWENLRENRFRQTKYQRLDRSLPSPTIMT----H 289
Query: 746 NRILLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
HP + R LT RE A LQ FP+ ++ GP+
Sbjct: 290 RHSYYHPVEHRYLTQREAAALQSFPNDFEFMGPL 323
>gi|358456222|ref|ZP_09166446.1| DNA-cytosine methyltransferase [Frankia sp. CN3]
gi|357080398|gb|EHI89833.1| DNA-cytosine methyltransferase [Frankia sp. CN3]
Length = 597
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 127/340 (37%), Gaps = 79/340 (23%)
Query: 445 DVDFICGGPPCQGVS--GFNRFRN--PQAALEDIK-NRQL-LVFMDVIEYLKPKYVLMEN 498
++D + GGPPCQ S G ++ R+ Q I RQL + F+ ++ LKP+ VLMEN
Sbjct: 45 EIDLVAGGPPCQPYSRAGSSKIRSLVEQGTRSRIDPRRQLWMAFLSIVLELKPRAVLMEN 104
Query: 499 VVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQY 558
V D+ R VG L Y T++ I+ + +PQ
Sbjct: 105 VPDMGLGDDFQTIRRIVGDLEVSGYVTQVRIIDTWKHRVPQ------------------- 145
Query: 559 PLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEK-GVLLSDAISDLPLVTNNESEDERKY 617
H + + A P + EK + DAI DLP + S R+
Sbjct: 146 ----HRRRLILLARRD------GGAFTWPKEDEKRQTTVCDAIGDLPRLL--LSTGARRL 193
Query: 618 GTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGAN 677
V E ++ R R + + +YDH V +DD RK
Sbjct: 194 PYVENAELSEFAREMRQ----------GADATFVYDHFTRPVRDDD---------RKAFE 234
Query: 678 FRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNT 737
M+ L S +P ++ S + RL W E+ T
Sbjct: 235 L-------------------MDETTLYSD---LPAEMKRYRSDSFDDKYNRLGWKELSRT 272
Query: 738 VVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ +HPS+ R LT+RE AR+Q FPD ++ G
Sbjct: 273 ITAHIAKDGYWYIHPSELRTLTVREAARIQTFPDWFRFAG 312
>gi|409991231|ref|ZP_11274511.1| site-specific DNA-methyltransferase [Arthrospira platensis str.
Paraca]
gi|409937907|gb|EKN79291.1| site-specific DNA-methyltransferase [Arthrospira platensis str.
Paraca]
Length = 388
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 126/333 (37%), Gaps = 63/333 (18%)
Query: 448 FICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSG 507
I GG PCQG S N+ + + +D +N + + L+P+ +++ENV +++K
Sbjct: 69 IILGGIPCQGFSICNQNKGDR---QDSRNYMFQDLIRISSLLQPEIIIIENVPNLIKAKT 125
Query: 508 G---FLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
+ + +L + YQ I+ A YG+PQ R R+F+ R P +P PTH
Sbjct: 126 TNRQLVIDLIMSKLRHLGYQVNYQILNATDYGIPQVRKRLFILAHRCDLTHP-FPQPTHT 184
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTE 624
+ + + +N L+K L +AISDLP + E +E +Y E
Sbjct: 185 TSNQTEL----------FTHN----LKKCPSLWEAISDLPDIDAGEGAEEMEYNKCPDHE 230
Query: 625 FQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGV 684
+Q+ +R V N + + + R + + + D KR F D
Sbjct: 231 YQQILRNGSDRVFNHKAMKHSQRLVQRFASMGWGDSTSDVPNHLRPLKRNSHQFSD---- 286
Query: 685 LVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQP 744
+ N R P K + + F H
Sbjct: 287 KIYDQNNRRMSP------YKPCNTIPASFYANFVH------------------------- 315
Query: 745 HNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
P ++R T RE AR+Q FPD Y G
Sbjct: 316 -------PYKNRNFTAREGARIQSFPDWYVFKG 341
>gi|304407248|ref|ZP_07388901.1| DNA-cytosine methyltransferase [Paenibacillus curdlanolyticus YK9]
gi|304343689|gb|EFM09530.1| DNA-cytosine methyltransferase [Paenibacillus curdlanolyticus YK9]
Length = 401
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 134/356 (37%), Gaps = 89/356 (25%)
Query: 445 DVDFICGGPPCQGVS----------GFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYV 494
+ D I GGPPCQG S GF F ED +N+ F+ + Y +PK
Sbjct: 69 NFDLIIGGPPCQGFSLIGTRLGTGKGFGEFG------EDPRNKLYKEFVRYVRYFQPKMF 122
Query: 495 LMENVVDILKFSGGFLARYAVGRLVSMD--------YQTRLGIMAAGSYGLPQFRLRVFL 546
LMENV + G R + + S D Y I+ A +G+PQ R RV
Sbjct: 123 LMENVPGLFSMHKG-AVRENIEQDFSFDDPEGLFVGYHVVSDIVKAVEFGVPQSRERVIF 181
Query: 547 WGARP-FKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
G R +P++P R V F+E E + DAI DLP
Sbjct: 182 LGVRKDLNIIPEHP--------RAV----FKE-------------EDFFTVQDAIGDLPK 216
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRP-FQVNNDDY 664
+ + E K R E Y++L + + LY+H FQ D
Sbjct: 217 LDIRDGEFSVK--NTPRNE-APYLKLLNTNAKRIKR-DTGFEDGYLYNHTTRFQNERD-- 270
Query: 665 ERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTK 724
R++ +L N DP + + L++G D+ K +++ +
Sbjct: 271 --------------REIFRILEPFQNLKTLDPDLIPIRLRNG---FDDFYRKLDYKKPSP 313
Query: 725 PFGRLWWDEIVNTVVTRAQPHNRILLHP--SQDRVLTIRENARLQGFPDCYQLFGP 778
T++ +HP +Q R +++RE ARLQ FPD + GP
Sbjct: 314 ------------TIIAHLHKDGLAFIHPDGNQARSISVREAARLQSFPDNFVFIGP 357
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 264 LLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
+LDL+SGCG + G +G + +++I+ AC + KFNHPET+V
Sbjct: 4 VLDLFSGCGGLGEGFL----QAGFDIAA--SVEIDEKACATQKFNHPETQV 48
>gi|448671300|ref|ZP_21687239.1| C-5 cytosine-specific DNA methylase [Haloarcula amylolytica JCM
13557]
gi|445765903|gb|EMA17040.1| C-5 cytosine-specific DNA methylase [Haloarcula amylolytica JCM
13557]
Length = 392
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
Query: 443 PGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDI 502
P DVD + GGPPCQG+S R+P +D +N LL F+D ++ P ++ENV ++
Sbjct: 69 PDDVDVVIGGPPCQGLSSAGH-RDP----DDPRNTLLLWFLDYVDATSPDAFVIENVREL 123
Query: 503 LKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR 550
L + R + ++T I+ A +G+PQ R RVF+ G R
Sbjct: 124 TWDRNADLFDALLSRADELGFETEYQILTASDFGVPQKRKRVFVVGVR 171
>gi|119511191|ref|ZP_01630308.1| C-5 cytosine-specific DNA methylase [Nodularia spumigena CCY9414]
gi|119464179|gb|EAW45099.1| C-5 cytosine-specific DNA methylase [Nodularia spumigena CCY9414]
Length = 432
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 132/347 (38%), Gaps = 86/347 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
++D + GGPPCQG S + + ED +N + ++ ++ L PK+ ++ENV +
Sbjct: 75 EIDVVFGGPPCQGFSLIGK-----RSFEDPRNSLVFHYIRLVLELSPKFFVIENVKGMTA 129
Query: 505 FSGGFLARYAVGRLVSMDYQTR--LGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
+ + + S Y+ R ++ A +G+PQ R R+F+ G R +LP YP
Sbjct: 130 GNHQAFIAEIINKFASNGYKVRQKYQVLNAAHFGVPQNRERLFILGCRNDLELPNYP--- 186
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVAR 622
E + + P + + P +L + +A+ DLP
Sbjct: 187 -EAITQRAKPKK---------SGLPHELNLSPTVWEALQDLP------------------ 218
Query: 623 TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDY-------ERVCCIPKRKG 675
E +KY L + D V + ++ LL R N+DY R+ R
Sbjct: 219 -EIEKYSELYQRDWVVTDFGKPSNYGRLL---RGLGSTNNDYSYQRQYDSRILTSSLRTQ 274
Query: 676 ANFRDLPGVLVGPDNKV-------RWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGR 728
N + P K + DP L++G P S+ F
Sbjct: 275 HNLETVTRFAATPYGKTEKISRFHKLDPQGICNTLRAGTP------------SNQGAF-- 320
Query: 729 LWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
T +P +HP R +T+RE ARL +PD ++
Sbjct: 321 -----------TSPRP-----IHPFIPRCITVREAARLHSYPDWFRF 351
>gi|261203805|ref|XP_002629116.1| DNA methyltransferase Dim-2 [Ajellomyces dermatitidis SLH14081]
gi|239586901|gb|EEQ69544.1| DNA methyltransferase Dim-2 [Ajellomyces dermatitidis SLH14081]
gi|239608866|gb|EEQ85853.1| DNA methyltransferase Dim-2 [Ajellomyces dermatitidis ER-3]
Length = 1233
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 427 LKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVI 486
L+ K N++ GDV+ I G PCQG S N +N ++++ + + +
Sbjct: 718 LQALQQKAEAGNLIAKLGDVEVISAGSPCQGYSNVNNRKNNAVSMQN--SSMIASVASYV 775
Query: 487 EYLKPKYVLMENVVDILKFSGGFLARYAVGRL----VSMDYQTRLGIMAAGSYGLPQFRL 542
++ +P+Y ++ENV+ + S R + +L V M YQ R+ + A S+G PQ R
Sbjct: 776 DFYRPQYAILENVIAM---SNRTHKRNPLCQLLCTFVGMGYQARVLNLDAWSFGAPQSRS 832
Query: 543 RVFLWGARPFKKLPQYPLPTH 563
R+F+ A P +LP +P TH
Sbjct: 833 RLFIVIAAPGLQLPAHPPLTH 853
>gi|327356173|gb|EGE85030.1| cytosine-specific methyltransferase [Ajellomyces dermatitidis ATCC
18188]
Length = 1233
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 427 LKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVI 486
L+ K N++ GDV+ I G PCQG S N +N ++++ + + +
Sbjct: 718 LQALQQKAEAGNLIAKLGDVEVISAGSPCQGYSNVNNRKNNAVSMQN--SSMIASVASYV 775
Query: 487 EYLKPKYVLMENVVDILKFSGGFLARYAVGRL----VSMDYQTRLGIMAAGSYGLPQFRL 542
++ +P+Y ++ENV+ + S R + +L V M YQ R+ + A S+G PQ R
Sbjct: 776 DFYRPQYAILENVIAM---SNRTHKRNPLCQLLCTFVGMGYQARVLNLDAWSFGAPQSRS 832
Query: 543 RVFLWGARPFKKLPQYPLPTH 563
R+F+ A P +LP +P TH
Sbjct: 833 RLFIVIAAPGLQLPAHPPLTH 853
>gi|170739771|ref|YP_001768426.1| DNA-cytosine methyltransferase [Methylobacterium sp. 4-46]
gi|168194045|gb|ACA15992.1| DNA-cytosine methyltransferase [Methylobacterium sp. 4-46]
Length = 434
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 12/151 (7%)
Query: 409 PSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQ 468
P + W L K + +E T +R+ ++ L G VD + GGPPCQG S N R+P
Sbjct: 49 PDQHVWP--SWLEKRAWRAEELFTT-HRAELVGLRGKVDLLAGGPPCQGFST-NGLRHP- 103
Query: 469 AALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF---SGGFLARYAVGRLVSMDYQT 525
+D ++ + V++ + ++P+ VL+ENVV +GG + Y L + YQ
Sbjct: 104 ---DDPRSAMVDVYLQYVAAVQPRLVLLENVVGFRSMKHRTGGSYSDYVTRELDRLGYQA 160
Query: 526 RLGIMAAGSYGLPQFRLRVFLWGARPFKKLP 556
++ A +G+PQ R R L A P LP
Sbjct: 161 WSDVLRAADWGVPQRRPRFVLLAA-PKGTLP 190
>gi|229490017|ref|ZP_04383870.1| modification methylase DdeI [Rhodococcus erythropolis SK121]
gi|229323118|gb|EEN88886.1| modification methylase DdeI [Rhodococcus erythropolis SK121]
Length = 431
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 16/156 (10%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
D+D + GGPPCQG S R D +N +++ E +KPK ++MENV +L
Sbjct: 158 DIDVLAGGPPCQGFSLAGRRDR-----ADPRNHLFRNLLELAELVKPKVLVMENVRLLLS 212
Query: 505 FS---GGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP--QYP 559
GG + +G + + Y + + A YG+PQFR RVF+ R + ++P
Sbjct: 213 MKDPDGGMVVDRILGEMAACGYDASVNTVNAQDYGVPQFRERVFIVATRRDSGIGPLRFP 272
Query: 560 LPTHEIVARGVIP-NEFQEIIVAYA---NNQPCQLE 591
TH + GV P F++ V A + Q C+ +
Sbjct: 273 PKTHGV--NGVAPLRTFRDATVDLAPLESGQACETD 306
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 712 DYAMKFEHQSSTKPFGRLWWDEIVNTV-VTRAQPHNRILLHPSQDRVLTIRENARLQGFP 770
D AM+ +T + RL WDE +TV T +HP R LT+RE ARLQ FP
Sbjct: 336 DPAMRPSSGYNTT-YKRLRWDEPASTVGTTFGMISASRNVHPKHTRSLTVREAARLQTFP 394
Query: 771 DCYQLFG 777
D Y G
Sbjct: 395 DDYVFEG 401
>gi|209523295|ref|ZP_03271851.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|209496446|gb|EDZ96745.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
Length = 387
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 138/358 (38%), Gaps = 88/358 (24%)
Query: 427 LKEFVTKGYRSNILPLPGD--VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMD 484
L+E T+ R L GD ++ ICGGPPCQG S N D +N L F+
Sbjct: 59 LREISTEQIRE----LIGDRHINLICGGPPCQGFSTIGSNNN-----LDKRNFLFLEFLR 109
Query: 485 VIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRV 544
+E LKP Y+++ENV +L + L ++ Y + +++A YG+P+ R R
Sbjct: 110 FVEQLKPDYIIIENVTGLLSRKNENTLTSILTCLQNIGYTVDVRVLSAHHYGVPEKRRRT 169
Query: 545 FLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLP 604
G R F YP P +FQ+ N+P + LP
Sbjct: 170 IFLGNR-FGVPNLYPSP------------QFQD-------NEP-----------DLDFLP 198
Query: 605 LVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDY 664
+ G + + HD LS+AQ+ N+ +
Sbjct: 199 AA--------KTVGFAWENWLEYQGKTYNHD---LSTAQIP--------------NHLER 233
Query: 665 ERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTK 724
+R+ IP+ KG ++ PD + P + + D+ E +
Sbjct: 234 QRIQHIPEGKGVRYQ--------PDQQAYLPPELWYDI---------DWEKLRESRFRET 276
Query: 725 PFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
RL D T+ T + HP+++R LT RE A +Q FP + +G V ++
Sbjct: 277 KLKRLARDSYSPTINTSRTTY----YHPTENRYLTPREAAAIQSFPPNFIFYGTVTQQ 330
>gi|23100791|ref|NP_694258.1| cytosine-specific methyltransferase [Oceanobacillus iheyensis
HTE831]
gi|50897489|sp|Q8EL95.1|MT36_OCEIH RecName: Full=Putative modification methylase OB3336; AltName:
Full=Cytosine-specific methyltransferase; AltName:
Full=M.OihORF3336P
gi|22779025|dbj|BAC15292.1| cytosine-specific methyltransferase [Oceanobacillus iheyensis
HTE831]
Length = 460
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 145/350 (41%), Gaps = 41/350 (11%)
Query: 448 FICGGPPCQGVSGFNRFRNPQAALE-----DIKNRQLLVFMDVIEYLKPKYVLMENVVDI 502
+ GGPPCQ S R + E D + + F+D ++ ++MENV +
Sbjct: 90 IVIGGPPCQAYSKIGRAKLKSLGEERRQENDARGKLYENFLDYALHVDANVIVMENVPEA 149
Query: 503 LKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP-FKKLPQYPLP 561
+ + G + L++ Y ++ A +G+PQ R+R+F+ + K+ P P
Sbjct: 150 VNYGGVNIPDTVCDILINKGYDAIWTVLNAADFGVPQTRVRLFVMAIKKDIGKIKFIPEP 209
Query: 562 THE---IVARGVIPNEF--QEIIVAYANNQPC----QLEKGVLLSDAISDLPLV------ 606
TH+ V R + + EI + QP L V + DAI DLP +
Sbjct: 210 THKPHINVKRQSVNVRWMQSEIRNSKYYKQPNIPDETLSDWVTVGDAIGDLPNLFPVYNQ 269
Query: 607 --TNNESEDERKYGTVARTEFQKYIRL-RRHDVVNLSSAQMASRPSLLYDHRPFQVNNDD 663
N + ++Y + + FQK +R+ + D V + + R ++D N D
Sbjct: 270 KYKNYKPMMMKEYKSPPQNTFQKLMRINNKVDKVTGNMFRNTKRDFSIFDKMEEGDNYLD 329
Query: 664 YERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSST 723
+ RK ++ + +N+ + +R+ VP Y+ +
Sbjct: 330 AHNIAMSLLRK-----EMRKSGITKENEFEYRLLKDRI--------VPPYST----EKFV 372
Query: 724 KPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCY 773
+ + +L D+ +T+V LHP + R +++RE ARLQ FPD +
Sbjct: 373 EKWRKLSSDKPSHTLVAHLSTDTYSHLHPREPRGISVREAARLQSFPDDF 422
>gi|336400726|ref|ZP_08581499.1| hypothetical protein HMPREF0404_00790 [Fusobacterium sp. 21_1A]
gi|336161751|gb|EGN64742.1| hypothetical protein HMPREF0404_00790 [Fusobacterium sp. 21_1A]
Length = 433
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 152/354 (42%), Gaps = 70/354 (19%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDI-- 502
++D I GGPPCQG S R + + DI+N ++ V+ +KPKY++ ENV I
Sbjct: 87 EIDAIFGGPPCQGFS-----RAGKQEVNDIRNLLFKEYLRVVSEIKPKYLVFENVPGIVD 141
Query: 503 LKFSG--------GFLARYAVGRLVSMDYQTRLG-------IMAAGSYGLPQFRLRVFLW 547
+KF + + A+ + + ++G I+ A +YG+PQ R R+ L
Sbjct: 142 IKFKNFISDFNNESYKNKNAID--IIRNELKKIGYNLLEPRILNASNYGVPQNRHRLILI 199
Query: 548 GARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLP--L 605
G R K P+Y P EF++ V L +A+SDL
Sbjct: 200 GFRNDMKEPKY-------------PKEFKQ---------------KVTLREALSDLTNYQ 231
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSA--QMASRPSLLYDHRPFQVNNDD 663
+ N + ++ K G K I ++ +LS + R SLL + + N+
Sbjct: 232 LDNKKYQNSSKKGRTKNIVTNKTILEKKKYNNDLSKHYNYIEERFSLLNEG---ESNSQL 288
Query: 664 YERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSST 723
+R+ + G P +L N++ S ++K K L + + +
Sbjct: 289 RKRLI----KNGLEITKYPNLLEYLSNRLIISKSE---IVKKCKNLSKENKLLDLIVTKK 341
Query: 724 KPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+L+ D+ NTV+T P + IL P +R+ ++RE ARLQ F D + +G
Sbjct: 342 NSRIKLYLDKPSNTVLT--LPDDLIL--PICNRICSVREFARLQSFDDSFVFYG 391
>gi|453084864|gb|EMF12908.1| S-adenosyl-L-methionine-dependent methyltransferase [Mycosphaerella
populorum SO2202]
Length = 1034
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 148/367 (40%), Gaps = 75/367 (20%)
Query: 434 GYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYL---K 490
G S+I+ PG + I G PCQG S ++++ D R + VI Y+
Sbjct: 679 GESSDIVAEPGSIHVISAGSPCQGFSNLQQYKD-----SDRSKRNASMVASVISYVDLYA 733
Query: 491 PKYVLMENVV----DILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFL 546
P+Y+++ENV+ I + G + + LV + YQ + +M A YG Q R RVF+
Sbjct: 734 PRYLILENVIAMTTSIKEHGGQNVFSQMIAALVGLGYQVQQFLMDAYYYGSSQARSRVFI 793
Query: 547 WGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLV 606
+ P ++ E Q+ Y + +P +LE+ + L + P
Sbjct: 794 LASAPICEVL-----------------EQQD----YTHARPTELERMLHLGKCSNGKPF- 831
Query: 607 TNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQ----VNND 662
S E Y A+ ++ + D+ + Q P DHR +N D
Sbjct: 832 ---GSRQEEAYFPFAQVSAEESV----GDLPVVFDGQPLLCPQFP-DHRTATEETVINRD 883
Query: 663 DYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKS---GKPL-VPDYAMKFE 718
R+ +PKR + S++R L G+PL + +
Sbjct: 884 ---RIAAVPKRP-------------------FGMSLKRAALAGLVRGEPLDFSNGHNQIR 921
Query: 719 HQSSTKPFGRLWWDEIVNTVVTRAQPHNRI---LLHPSQDRVLTIRENARLQGFPDCYQL 775
++ + R++ + T++T + I ++H ++DRVLTI E R QG PD L
Sbjct: 922 CGPNSNSYRRIFPNRPFPTIITMISVTDGIAGQVVHWNEDRVLTIMETRRAQGLPDDEVL 981
Query: 776 FGPVKER 782
G ER
Sbjct: 982 VGLPAER 988
>gi|418630145|ref|ZP_13192633.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
VCU127]
gi|374831827|gb|EHR95553.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
VCU127]
Length = 329
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 32/165 (19%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VD I GGPPCQG S +F + ++D +N+ ++ + LKPK ++ENV ++
Sbjct: 71 VDVIIGGPPCQGFSLAGKF--GRTFIDDPRNQLFKEYLRFVSILKPKIFIIENVARLVSH 128
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
+ G R + + YQ + I+ Y +PQ R RVF+ G +
Sbjct: 129 NKGKTIREIQDSIKKLGYQVKYEILQTSDYNIPQKRQRVFIVGYKNI------------- 175
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNE 610
EF N P +L++ V + +AISDLP + + E
Sbjct: 176 --------EF---------NYPEKLKRKVTIKEAISDLPPLNSGE 203
>gi|302656192|ref|XP_003019852.1| hypothetical protein TRV_06140 [Trichophyton verrucosum HKI 0517]
gi|291183624|gb|EFE39228.1| hypothetical protein TRV_06140 [Trichophyton verrucosum HKI 0517]
Length = 1085
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 147/352 (41%), Gaps = 78/352 (22%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
GD FI G PCQG S N ++ + ++ + + + I+ +P+Y ++ENV
Sbjct: 707 GDAHFISAGSPCQGYSSANAHKDNEVSMRN--SSMIASVASYIDLYRPQYAILENV---- 760
Query: 504 KFSGGFLARYA--------VGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
G +R + V M YQTR+ + A S+G PQ R R+F+ P +
Sbjct: 761 ---AGMASRTHEQNPLSQLLCTFVGMGYQTRVFNLDAWSFGAPQSRSRLFIAITAPGLHI 817
Query: 556 PQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
++P TH + P + S A+ D P N + ER
Sbjct: 818 LEHPALTH---------------------SHPPGTK-----SRALGDNP---NGSTFGER 848
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVC-CIPKR- 673
++ T EF R D+ + +A++ S P DHR +V +++ + + IPK
Sbjct: 849 RWDTPV-FEFVS-ARSATQDLPPIDTARIMSIP--WPDHRSSRVESEEKQALIQNIPKYP 904
Query: 674 KGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDE 733
KG LVG + DP +K+ +++K + R++ ++
Sbjct: 905 KGQG-------LVGAIARGWVDPLEHSARMKA---------------ATSKAWSRIYPEK 942
Query: 734 IVNTVVTRAQP---HNRILLHPSQDRVLTIRENARLQGFPDCYQLFG-PVKE 781
V T P LH +DR++T++E R QG+PD L G PV++
Sbjct: 943 PFPAVTTGVCPFCIFTGRWLHWQEDRLVTVQEVRRAQGYPDNEVLIGSPVQQ 994
>gi|374704182|ref|ZP_09711052.1| cytosine-specific methyltransferase [Pseudomonas sp. S9]
Length = 449
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 149/380 (39%), Gaps = 92/380 (24%)
Query: 444 GDVDFICGGPPCQGVSGFNR-----------FRNPQAALEDIKNRQLLVFMDVIEYLKPK 492
G++D + GGPPCQG S R F D +N +L +++V E LKPK
Sbjct: 82 GELDCMIGGPPCQGFSQLRRSEQLNKGKIVKFSGYSQLAHDPRNDLVLRYLEVAEALKPK 141
Query: 493 YVLMENVVDILK--FSG--GFLARYAVGRL-VSMDYQTRLGIMAAGSYGLPQFRLR-VFL 546
++++ENV +L F G G L+ + L + Y + I+ YG+PQ R R VF+
Sbjct: 142 FLVIENVPQMLNHGFDGRLGKLSETVINILERDLGYNVEVAILNCADYGVPQLRERAVFI 201
Query: 547 WGARPFKKLP--QYPLPTHEI-VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDL 603
+ LP + P +EI +A+G+ P V + AI+DL
Sbjct: 202 ASSIGPASLPTKTHTSPQNEILIAQGLKP--------------------WVTVEQAIADL 241
Query: 604 PLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDD 663
P + N + ++ Y R R++D L M S+ + ++H
Sbjct: 242 PPPSTNGID------SLGGKSINIY-RGRKNDYTQL----MRSQSTFPHNHITRHYKQSV 290
Query: 664 YERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSST 723
+ + + PG WD ER M K + ++ ++++ S
Sbjct: 291 LDTIKEMQ----------PG--------QTWDAESER-MQKKYQEIIKNHSLSLNITSEE 331
Query: 724 ---------------------KPFGRLWWDEIVNTVVTRAQ-PHNRILLHPSQDRVLTIR 761
+ RL W+ T+ A + HPS+ R +T+R
Sbjct: 332 AMQQLIEMKIINPVFFKRYYWSAYSRLAWNAPALTITANANFLGSGRFSHPSEQRGITMR 391
Query: 762 ENARLQGFPDCYQLFGPVKE 781
E ARLQ F D ++ + E
Sbjct: 392 EAARLQSFDDDFRFVTSMDE 411
>gi|354614138|ref|ZP_09032022.1| DNA-cytosine methyltransferase [Saccharomonospora paurometabolica
YIM 90007]
gi|353221514|gb|EHB85868.1| DNA-cytosine methyltransferase [Saccharomonospora paurometabolica
YIM 90007]
Length = 653
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 123/344 (35%), Gaps = 80/344 (23%)
Query: 445 DVDFICGGPPCQGVSGF------NRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMEN 498
++D + GGPPCQ S +R RN D + +++VI +P V+MEN
Sbjct: 117 EIDVLAGGPPCQPFSKAGRSMIRHRVRNELRDPHDERRDLWRSYLEVIRLARPAAVVMEN 176
Query: 499 VVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQY 558
V D+ F+ R V L + Y ++ A Y +PQFR R+ L R
Sbjct: 177 VPDMALDREMFILRTMVEELEQLGYSVEERVVDAWRYRVPQFRQRLILVAMRD------- 229
Query: 559 PLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYG 618
A + P + + + +AI DLP V + G
Sbjct: 230 ----------------------GLAFDWPDDATEQINVGNAIGDLPEVAGGWRPEGGADG 267
Query: 619 TV----ARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
T+FQ+ + RH V + ++DH V DD
Sbjct: 268 WADYDRPLTDFQRTM---RHGVPEQDIGK-------VFDHITRPVREDDAR--------- 308
Query: 675 GANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEI 734
+ E + K+ +P+ ++ + RL + +
Sbjct: 309 ----------------------AFEVMTHKTRYSELPEEFKRYREDIFDDKYKRLDENNL 346
Query: 735 VNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGP 778
T+ +HP Q+R LT+RE ARLQ FPD ++ GP
Sbjct: 347 SRTITAHIAKDGYWYIHPYQNRTLTVREAARLQTFPDWFRFAGP 390
>gi|442321299|ref|YP_007361320.1| DNA-cytosine methyltransferase [Myxococcus stipitatus DSM 14675]
gi|441488941|gb|AGC45636.1| DNA-cytosine methyltransferase [Myxococcus stipitatus DSM 14675]
Length = 559
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 76/183 (41%), Gaps = 25/183 (13%)
Query: 446 VDFICGGPPCQGVSGFNRFR------------NPQAALEDIKNRQLLVFMDVIEYLKPKY 493
+D + GGPPCQ + R + QA L D + ++ I KP
Sbjct: 143 IDVLVGGPPCQAFARVGRAKLREQAHRRQEATADQAFLVDGRVSLWQRYVHFIRATKPVA 202
Query: 494 VLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWG-ARPF 552
+LMENV DIL G +A LV Y ++ A YG+PQ R R+ L G R
Sbjct: 203 LLMENVPDILNHGGSNVAELVSKSLVEEGYSVAYTLLNAAWYGVPQTRERMILIGFHRAT 262
Query: 553 KKLPQYPLPTHEI-----------VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAIS 601
+P++P PTH + AR VI E E A+ L S A++
Sbjct: 263 GIMPRFPSPTHHVDLPSGYTSSKNTARRVIHEEGSEYHRWMADPT-RSLSPATTASQALT 321
Query: 602 DLP 604
DLP
Sbjct: 322 DLP 324
>gi|212639806|ref|YP_002316326.1| Site-specific DNA methylase [Anoxybacillus flavithermus WK1]
gi|212561286|gb|ACJ34341.1| Site-specific DNA methylase [Anoxybacillus flavithermus WK1]
Length = 469
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 137/354 (38%), Gaps = 79/354 (22%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VD + GG PC+ S + A D ++ L + + ++K K VL ENV
Sbjct: 122 VDIVTGGAPCESFS-----MAGKRADGDERDDLFLNILRIARHVKSKMVLFENV------ 170
Query: 506 SGGFLARYAVGRLV---------SMDYQTRLGI---------MAAGSYGLPQFRLRVFLW 547
G ++ + G+ V S Y T + + A YG+PQ R R+FL
Sbjct: 171 -KGLFSKRSNGKSVFENICDEFESTAYDTSFYLASRDPHQILLKASDYGVPQHRERIFLI 229
Query: 548 GA-RPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLV 606
G R + +YPLPTH P + V + DA+ DLP V
Sbjct: 230 GINRDYDATFRYPLPTH----------------------GPDRTFPYVTVGDALFDLPEV 267
Query: 607 TNNESEDERKYGTV--ARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDY 664
+ E E + + TE ++ L+ + +A P+ L H+
Sbjct: 268 HSGEEAIEYTFNFLDDTLTEQRRDFLLKMRGITLGFPEHLAFHPNTLTSHKAVNHREKMI 327
Query: 665 ERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTK 724
R+ I R+G N + + ER++L++ + L + F ++
Sbjct: 328 RRMELI--RQGENMK----------------TAAERLILENREDLRKEL---FPNKLYGA 366
Query: 725 PFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGP 778
RL D TV + ++HP Q R LT RE ARLQ FPD Y GP
Sbjct: 367 RNRRLREDIPSFTVTSHCLDE---MIHPIQHRGLTPREAARLQSFPDWYIFEGP 417
>gi|295110825|emb|CBL24778.1| DNA-methyltransferase (dcm) [Ruminococcus obeum A2-162]
Length = 311
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLME 497
NI LP + D + GG PCQG S NR R LED +N+ F I+ +PK+ + E
Sbjct: 55 NIYDLP-EADVVVGGFPCQGFSLANRKR----TLEDERNQLYKFFYSTIKIKQPKFFIAE 109
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP---FKK 554
NV IL G + + V Y T + ++ +YG+PQ R RV + G R +
Sbjct: 110 NVRGILSLGKGEVIKQIVSDFEEAGYITTVNLVNMANYGVPQTRQRVLIIGQRKDYGEEM 169
Query: 555 LPQYPLPT 562
L Q+P PT
Sbjct: 170 LFQFPQPT 177
>gi|302873652|ref|YP_003842285.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
gi|307686624|ref|ZP_07629070.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
gi|302576509|gb|ADL50521.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
Length = 445
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 148/370 (40%), Gaps = 85/370 (22%)
Query: 442 LPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVD 501
+P D+D I GGPPCQG S R ++ +D +N ++ VI + PKYV+MENVV
Sbjct: 84 VPEDIDAIFGGPPCQGFSRAGRRKS-----DDPRNLLFKEYLRVIREVNPKYVVMENVVG 138
Query: 502 IL--KFSG--GFLARYAVGRLVS----------MDYQT-RLGIMAAGSYGLPQFRLRVFL 546
L KF G G + +V+ + Y T +M A +YG+PQ R RV
Sbjct: 139 FLDTKFYGFVGVTGQLYDDGMVAPEILRNEFQLIGYNTLEPQVMDAANYGVPQRRNRVIF 198
Query: 547 WGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLV 606
R PQYP PT E + + DAI+D L+
Sbjct: 199 IAYRDDVVAPQYPEPT-------------------------VTEETKLTIEDAITD--LI 231
Query: 607 TNNESEDERKYGTVARTEFQKYIRLRRHDV----VN----LSSAQMASRPSLLYDHRPFQ 658
+ G +++ + Q I R D+ +N + + +++S ++ +
Sbjct: 232 RERRVRNRIFNGRLSQFQ-QDSINGRTPDINGNTINSNGVIYNNEVSSHTPIIKERFSLF 290
Query: 659 VNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSM-----ERVMLKSGKPLVPDY 713
+D ++ KG N R G DN + + M + V+ K K V D
Sbjct: 291 KEGEDGGQLRNRIATKGINLR-------GKDNLILYCSQMLSMEEDEVVKKFKKADVNDE 343
Query: 714 AMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRIL------LHPSQDRVLTIRENARLQ 767
+ L + + T + RA+P ++ + P + R T+RE ARLQ
Sbjct: 344 MLDV-----------LLTKKNIRTRLDRAKPAATVMTIADDYISPFEARTFTVRELARLQ 392
Query: 768 GFPDCYQLFG 777
F D + G
Sbjct: 393 SFDDSFVFLG 402
>gi|421654595|ref|ZP_16094922.1| putative modification methylase HaeIII [Acinetobacter baumannii
Naval-72]
gi|408510366|gb|EKK12028.1| putative modification methylase HaeIII [Acinetobacter baumannii
Naval-72]
Length = 309
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 27/187 (14%)
Query: 423 CK---EKLKEFVTKGYRSNILP--LPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNR 477
CK + E + G S+I +P + D + GG PCQG S N R + +D +N+
Sbjct: 35 CKTYAHNIGEHIVHGNISSIFSDTIP-ECDVVIGGFPCQGFSQANLKR----SNDDDRNQ 89
Query: 478 QLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGL 537
L F+ ++ KPKY + ENV IL GG + + + Y+ + + YG+
Sbjct: 90 LYLEFLRIVTDKKPKYFVAENVRGILSLDGGNAIKKIIDDFKNAGYRIQYQLFNTADYGV 149
Query: 538 PQFRLRVFLWGAR-PFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLL 596
PQ R RV + G R +P PTH ++ + N P L+ V +
Sbjct: 150 PQTRYRVIIIGIRNDLNHEYIFPTPTH----------------ISPSKNNPLGLKPWVSI 193
Query: 597 SDAISDL 603
S+A+ D+
Sbjct: 194 SEALKDI 200
>gi|347836057|emb|CCD50629.1| hypothetical protein [Botryotinia fuckeliana]
Length = 1459
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 69/117 (58%), Gaps = 9/117 (7%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDV-IEYLKPKYVLMEN 498
+PLPGDVD I G PCQ GF+R + + + ++N+ L+ + I++ +PKY L+EN
Sbjct: 773 IPLPGDVDVIMAGSPCQ---GFSRMNSNKGNDQSLRNQSLIASVAAYIDFYRPKYGLLEN 829
Query: 499 VVDI----LKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
V+++ L+ L++ + +V + YQ +L ++ + S+G Q R R+F+ A P
Sbjct: 830 VLNMAQKGLRRDEDVLSQL-ICTIVGLGYQVQLFLLDSWSFGSSQSRSRIFVSFAAP 885
>gi|86360841|ref|YP_472728.1| DNA (cytosine-5-)-methyltransferase [Rhizobium etli CFN 42]
gi|86284943|gb|ABC94001.1| probable DNA (cytosine-5-)-methyltransferase protein [Rhizobium
etli CFN 42]
Length = 504
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 447 DFICGGPPCQGVSGFNRFR------NPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVV 500
D I GGPPCQ + R + +P+A D + R + ++ +E P V++ENV
Sbjct: 97 DVIVGGPPCQAFARVGRSKLREIAEHPEAFRHDSRARLYIEYLAYVEACAPLAVVIENVP 156
Query: 501 DILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP---Q 557
D+L G LA L S DY R ++ A YG+PQ R R+ L R K+L +
Sbjct: 157 DMLNHGGHNLAAEIGEILASKDYVVRYTLLNAAFYGVPQMRERMILIAIR--KELADDVE 214
Query: 558 YPLPTHEI 565
+P PTH I
Sbjct: 215 FPAPTHWI 222
>gi|160873497|ref|YP_001552813.1| DNA-cytosine methyltransferase [Shewanella baltica OS195]
gi|378706736|ref|YP_005271630.1| DNA-cytosine methyltransferase [Shewanella baltica OS678]
gi|160859019|gb|ABX47553.1| DNA-cytosine methyltransferase [Shewanella baltica OS195]
gi|315265725|gb|ADT92578.1| DNA-cytosine methyltransferase [Shewanella baltica OS678]
Length = 385
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 68/120 (56%), Gaps = 8/120 (6%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
G+++ + GGPPCQG F+ R A ++D +N+ LL + D ++ L+PK L+ENV +L
Sbjct: 74 GELELLLGGPPCQG---FSTHRINNAGIDDPRNQLLLKYFDFVDGLQPKAFLIENVAGLL 130
Query: 504 -KFSGGFLARYAVGRLVSMDYQTRL-GIMAAGSYGLPQFRLRVFLWGARPFKKL--PQYP 559
K +L + + + Y GI+ A YG+PQ R RVF++G R K+ P +P
Sbjct: 131 WKRHENYLNQL-LALAETHGYTIHFCGILNAKDYGVPQNRKRVFIFGTRNDLKINNPAFP 189
>gi|330997448|ref|ZP_08321299.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT
11841]
gi|329570822|gb|EGG52538.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT
11841]
Length = 417
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 139/343 (40%), Gaps = 73/343 (21%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VD I GGPPCQ S R R+ D +N ++ +++Y KPK+ + ENVV +L
Sbjct: 97 VDVIIGGPPCQAYSLAGRIRDEHGMRNDYRNYLFECYVKIVKYFKPKFFVFENVVGLLSA 156
Query: 506 S--GGFL------ARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQ 557
+ G + A G +V+ +++T L +A YG+PQ R RV + G
Sbjct: 157 APDGTLITSRISEAFNGAGYVVTPNFKTALFDVA--DYGIPQHRKRVIILG--------- 205
Query: 558 YPLPTHEIVARGVIPNEFQEIIVA-YANNQPCQLEKGVLLSDAISDLPLVTNNESEDERK 616
+++G+ ++ +++ + Y P K + DAISDLP + E +K
Sbjct: 206 --------ISKGLFGDKCGKMLDSFYTCILPSLKGKARNVHDAISDLPALY--PLEFPKK 255
Query: 617 YGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGA 676
G + Q+ R + + +A+ + LL + + + E V
Sbjct: 256 EGKSKMSHMQRDTRYFTNHIPRFHNARDIAVFKLLAE----DIKSGKREYV--------- 302
Query: 677 NFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVN 736
S+ER+ K L + K S+ + L +E N
Sbjct: 303 --------------------SIERL-----KKLYTEVTGKV---SNIHKYYVLRENEPSN 334
Query: 737 TVVTRAQPHNRILLHPS--QDRVLTIRENARLQGFPDCYQLFG 777
T+ +HP Q R +T RE ARLQ FPD ++ G
Sbjct: 335 TIPAHLFKDGMRHIHPDPEQARSITPREAARLQTFPDDFEFLG 377
>gi|428779548|ref|YP_007171334.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
gi|428693827|gb|AFZ49977.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
Length = 392
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D +CGGPPCQG S Q +D +N F+ +I+ LKP YV+MENV +L
Sbjct: 71 IDLVCGGPPCQGFSTIG-----QNNHQDQRNFLFWEFLRIIKSLKPDYVIMENVTGLLSR 125
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP--LPTH 563
+ + Y+ + +++A YG+P+ R R L R F+ YP L ++
Sbjct: 126 KNEVTLNVILESFTQIGYKVDIKVLSAHHYGVPEKRRRTILLANR-FQVKNLYPEILFSN 184
Query: 564 EIVARGV 570
E AR V
Sbjct: 185 EEEARTV 191
>gi|297618103|ref|YP_003703262.1| DNA-cytosine methyltransferase [Syntrophothermus lipocalidus DSM
12680]
gi|297145940|gb|ADI02697.1| DNA-cytosine methyltransferase [Syntrophothermus lipocalidus DSM
12680]
Length = 388
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 10/131 (7%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
G V + GGPPCQ S F R + ++D + L F+ VI ++P+ + ENV +L
Sbjct: 85 GKVSLVIGGPPCQSFSVFGR----RKGMDDPRGTLLWDFIRVIREVQPEVFIFENVAGLL 140
Query: 504 KFSGG-----FLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQY 558
G F+ + DY ++ +YG+PQFR R+ ++G+R K+ +
Sbjct: 141 TIDDGKVFERFMEEVGKNEFGTQDYTLTHYLLDTANYGVPQFRSRLIVFGSRSGIKISK- 199
Query: 559 PLPTHEIVARG 569
P PTH A G
Sbjct: 200 PQPTHSPEANG 210
>gi|434393274|ref|YP_007128221.1| DNA-cytosine methyltransferase [Gloeocapsa sp. PCC 7428]
gi|428265115|gb|AFZ31061.1| DNA-cytosine methyltransferase [Gloeocapsa sp. PCC 7428]
Length = 427
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 136/364 (37%), Gaps = 91/364 (25%)
Query: 427 LKEFVTKGYRSN----ILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
++E T YRS+ I G +D + GGPPCQG S + +L+D +N + F
Sbjct: 74 IREAATCAYRSHYPQAISSWDGRIDLVFGGPPCQGFSIMGK-----RSLDDERNNLVFHF 128
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
++ L P Y +MENV + + YQ + I+ A +G+PQ R
Sbjct: 129 YRLVTELSPSYFVMENVPGMAIGQYKLWCAQLKTQFEQAGYQVEVQILNAADFGVPQRRR 188
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISD 602
R+F G++ +GV P P + + DAI+D
Sbjct: 189 RLFFLGSQ-----------------QGVTPVSL-----------PKPYSTLITVKDAIAD 220
Query: 603 LP-------LVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLS-SAQMASRPSLLYDH 654
LP L+ +E ++ + + Y +L R ++ + S + A P LL
Sbjct: 221 LPDVEEFPELLFTDEVLLSDRHLLELQQKASDYTKLLRGEISSTDFSYRRAWNPQLLTSS 280
Query: 655 RPFQVNNDDYERVCC-IPKRKG--ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVP 711
Q + R +P ++ ++ R L L G + +R ER S +P
Sbjct: 281 MRTQHTANSIARFASMLPNQREPISHLRRLD--LNGLSHTLRAGTGAERGSYTSPRP--- 335
Query: 712 DYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPD 771
+HP++ RV+++RE ARL FPD
Sbjct: 336 --------------------------------------IHPTRSRVISVREAARLHSFPD 357
Query: 772 CYQL 775
++
Sbjct: 358 WFRF 361
>gi|409197559|ref|ZP_11226222.1| DNA-cytosine methyltransferase [Marinilabilia salmonicolor JCM
21150]
Length = 416
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 147/356 (41%), Gaps = 80/356 (22%)
Query: 439 ILPLPGD--VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLM 496
I L GD +DFI GGPPCQ S R R+ D +N + +EY +P+Y +
Sbjct: 98 IDSLKGDKSIDFIIGGPPCQAYSIVGRSRDGNRMQGDSRNYLFREYAKFLEYYQPRYFVF 157
Query: 497 ENVVDILKF---SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFK 553
ENV+ + +G + Y T I+ A +G+ Q R R+ L G + K
Sbjct: 158 ENVIGLKSAKTKNGDSYLEMMRELFLEKGYYTEYKILEAKDFGVLQNRKRIILIGKKNGK 217
Query: 554 KLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESE- 612
+ G P +F+++ + GV +S+ DLP + E
Sbjct: 218 E--------------GFYP-KFEKV------------QSGVTVSEIFKDLPSLRAGAGEY 250
Query: 613 ---DERKY-GTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVC 668
+ + Y GT F+ +IR + ++ ++ Q SRP+ D +++ + +E
Sbjct: 251 YKTNYKPYNGTYL---FESHIR----NGLDFTT-QHISRPNTEQDKGIYKLAVEKWE--- 299
Query: 669 CIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGR 728
++ N+ D+P + W K+ K V +F+ ++ P+ +
Sbjct: 300 --DGQQRLNYNDIP---------LHWQTH------KNTKSFVD----RFKVVAADLPYSQ 338
Query: 729 LWWDEIVNTVVTRAQPHNRILLHP--SQDRVLTIRENARLQGFPDCYQLFGPVKER 782
TVV +HP SQ+R LT RE ARLQ FPD + F + E+
Sbjct: 339 --------TVVAHICKDGHYYIHPDKSQNRSLTPREAARLQTFPDDF-FFEGISEK 385
>gi|240979618|ref|XP_002403217.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
gi|215491328|gb|EEC00969.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
Length = 230
Score = 68.6 bits (166), Expect = 1e-08, Method: Composition-based stats.
Identities = 58/215 (26%), Positives = 89/215 (41%), Gaps = 51/215 (23%)
Query: 602 DLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNN 661
DLP + N +E YG A T FQ+ +R ++L DH ++
Sbjct: 3 DLPEIRNGAKREEIPYGAEALTPFQRTLR---------------GGGAVLRDHVCKEMAP 47
Query: 662 DDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVM--LKSGKP----------- 708
R+ IP G+++RDLP +V + V + + K+GK
Sbjct: 48 LVEARMRHIPLEPGSDWRDLPNAVVRLSDGVTFTRKLRYTHHDRKNGKSSTGALRGVCPC 107
Query: 709 -------------------LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI- 748
+P + H + +GRL WD +T VT +P +
Sbjct: 108 AEDAPCDPVCRQDNTLIPWCLPHTGNRHNHWAGL--YGRLDWDGFFSTTVTNPEPMGKQG 165
Query: 749 -LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+LHP Q RV+++RE AR QGFPD Y+ FG + +R
Sbjct: 166 RVLHPEQHRVVSVRECARSQGFPDTYRFFGTILDR 200
>gi|448482863|ref|ZP_21605634.1| DNA-cytosine methyltransferase [Halorubrum arcis JCM 13916]
gi|445821149|gb|EMA70945.1| DNA-cytosine methyltransferase [Halorubrum arcis JCM 13916]
Length = 400
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 75/170 (44%), Gaps = 24/170 (14%)
Query: 412 DTWEPIKGLSKCKEKLKEFVTKGYRSNILPL-----------PGDVDFICGGPPCQGVSG 460
D WEP + EF+ R P P VD + GGPPCQ G
Sbjct: 58 DQWEPAAETYRRNFADTEFLEGDVRELDAPAIREAVAGAGYDPDGVDVVIGGPPCQ---G 114
Query: 461 FNRFRNPQAALE----DIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGG---FLARY 513
F+R N Q L+ D +N F+ V+ L+P+ VLMENV D++ ++
Sbjct: 115 FSRLNNEQIELDEMEKDRRNTLFEEFLRVVSVLEPQLVLMENVRDLINRQTSDDRYVKDL 174
Query: 514 AVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP-QYPLPT 562
V + Y+ ++ A YG+PQ R R+F G + +P ++P PT
Sbjct: 175 IVDEFAAHGYKCEYRVLEAEQYGVPQKRRRIFFMGTD--RDVPIRFPEPT 222
>gi|357487681|ref|XP_003614128.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
gi|355515463|gb|AES97086.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
Length = 692
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 14/69 (20%)
Query: 714 AMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCY 773
AM F +S K FGRLWWDE+V+T+ Q V ++REN RLQGFPDCY
Sbjct: 636 AMTFVRGTSFKLFGRLWWDEVVSTL--------------WQQGVHSLRENVRLQGFPDCY 681
Query: 774 QLFGPVKER 782
+L P+K+R
Sbjct: 682 KLCSPIKQR 690
>gi|270293678|ref|ZP_06199880.1| cytosine-specific methyltransferase [Bacteroides sp. D20]
gi|270275145|gb|EFA21005.1| cytosine-specific methyltransferase [Bacteroides sp. D20]
Length = 361
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 139/338 (41%), Gaps = 82/338 (24%)
Query: 445 DVDFICGGPPCQGVSGFNRF-RNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
+V I GGPPCQG S N RN +++ N F+ ++ +KP++ ++ENV +
Sbjct: 68 EVFIIMGGPPCQGFSMSNTMSRN----MDNPNNLLFKEFVRLVSEIKPRWFVLENVWGMT 123
Query: 504 KFSGGFLARYAVGRLVSMD--YQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLP 561
K + G ++ Y+ + ++ A YG+PQ R+R+F+ G
Sbjct: 124 KMNNGETIEMIKHCFEEIEPGYKVKWKVLWADEYGVPQRRMRMFMVGNN----------- 172
Query: 562 THEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVA 621
+G I EF P + V + +AI DLP++ N + D Y T +
Sbjct: 173 ------QG-IDFEF-----------PKPFDYKVSVEEAIGDLPVLHNGDMIDSLPY-TKS 213
Query: 622 RTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDL 681
E Y + R + S S+ + L R Y+ + +G N+R +
Sbjct: 214 IKESSPYAQQMRKGSIE-SKQNFVSKSNDLVMQR--------YKYIG-----QGENWRAI 259
Query: 682 PGVLV-GPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVT 740
P L+ +K R + + LK+ P V V++
Sbjct: 260 PESLMRNYSDKTRCHSGIYK-RLKANCPSV---------------------------VIS 291
Query: 741 RAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGP 778
+ +L+HP QDR L++RE ARLQ FPD + GP
Sbjct: 292 NYR--KSMLIHPYQDRGLSVREAARLQSFPDTFIFQGP 327
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 12/68 (17%)
Query: 284 LSGVKLVTRWAIDINPHACKSLKFNHPETKV-----RNEAADDFLSLLKEWAKL-----C 333
++G+K+ R+AI++NPHA KS + NH KV R+ A DFL+ +E + C
Sbjct: 21 MAGIKV--RYAIEVNPHAAKSFELNHKGAKVICGDIRDVKATDFLNKDEEVFIIMGGPPC 78
Query: 334 QYFSIYDT 341
Q FS+ +T
Sbjct: 79 QGFSMSNT 86
>gi|296414683|ref|XP_002837027.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295632876|emb|CAZ81218.1| unnamed protein product [Tuber melanosporum]
Length = 939
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
Query: 429 EFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FMDVIE 487
E +G S+++ P +VDFI G PCQG S N+ +N L +N L+ ++
Sbjct: 593 EDAIRGKYSHLVAHPDEVDFISAGSPCQGFSNANQLKNNDTGL---RNCSLVASVATAVD 649
Query: 488 YLKPKYVLMENVVDIL---KFSGGF---LARYAVGRLVSMDYQTRLGIMAAGSYGLPQFR 541
+P+Y L+ENV + K S G + V +V M YQT+ + + S+G Q R
Sbjct: 650 VFRPRYALLENVGGLASTRKLSTGVEVNVFAQLVCCVVGMGYQTQQFTLDSWSFGSAQSR 709
Query: 542 LRVFLWGARPFKKLPQYPLPTHE 564
R+FL A P LP P +H+
Sbjct: 710 TRLFLSIAAPGTGLPPRPTRSHD 732
>gi|251811836|ref|ZP_04826309.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|282875124|ref|ZP_06283997.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
SK135]
gi|417914581|ref|ZP_12558225.1| putative modification methylase HaeIII [Staphylococcus epidermidis
VCU109]
gi|421608173|ref|ZP_16049400.1| DNA-cytosine methyltransferase [Staphylococcus epidermidis AU12-03]
gi|251804633|gb|EES57290.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295889|gb|EFA88410.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
SK135]
gi|341652137|gb|EGS75927.1| putative modification methylase HaeIII [Staphylococcus epidermidis
VCU109]
gi|406656171|gb|EKC82583.1| DNA-cytosine methyltransferase [Staphylococcus epidermidis AU12-03]
Length = 329
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 32/165 (19%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VD I GGPPCQG S +F + ++D +N+ ++ + LKPK ++ENV ++
Sbjct: 71 VDVIIGGPPCQGFSLAGKF--GRTFIDDPRNQLFKEYLRFVSILKPKIFIIENVARLVSH 128
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
+ G R + + Y+ + I+ Y +PQ R RVF+ G +
Sbjct: 129 NKGKTIREIQESIEKLGYKVKYEILQTSDYNIPQKRQRVFIVGYKNI------------- 175
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNE 610
EF N P +L++ V + +AISDLP + N E
Sbjct: 176 --------EF---------NYPEKLKRKVTIKEAISDLPPLKNGE 203
>gi|423330032|ref|ZP_17307832.1| DNA (cytosine-5-)-methyltransferase [Myroides odoratimimus CCUG
3837]
gi|404602504|gb|EKB02200.1| DNA (cytosine-5-)-methyltransferase [Myroides odoratimimus CCUG
3837]
Length = 423
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 135/344 (39%), Gaps = 77/344 (22%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+VD + GGPPCQ S R R+P+ +D +N +++ ++ KPK + ENV IL
Sbjct: 110 EVDVVIGGPPCQAYSVAGRARDPEKMKKDPRNFLYKYYVEFLKRYKPKMFVFENVPGILS 169
Query: 505 FSGGFLARYAVGRLVSMDY-----QTRLGIMAAGSYGLPQFRLRVFLWGAR---PFKKLP 556
G + + Y Q ++ + +G+ Q R RV + G R PFK
Sbjct: 170 AKNGIHLENIIKAIEKAGYKWDMPQNDKKVLNSKDFGVLQDRKRVIIIGWREDLPFK--- 226
Query: 557 QYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNE-SEDER 615
YP +F +Y +L D DLP+++ + + +
Sbjct: 227 -YP--------------DFDSNEYSYE-----------VLKDLFQDLPIMSQGKGTMNAV 260
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
KY + A T++ + ++R + L+ + RP+ D +Q V K K
Sbjct: 261 KYKSEA-TDYLHWAKIRNKEWDILTHHLV--RPNNKIDLEIYQT------AVSLWNKGKR 311
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIV 735
N+ +LP L+ N +S T F + I
Sbjct: 312 LNYTELPERLITHKNL----------------------------KSFTNRFQVVNGKGIS 343
Query: 736 NTVVTRAQPHNRILLHP--SQDRVLTIRENARLQGFPDCYQLFG 777
+TVV +HP Q+R L++RE AR+Q FPD Y G
Sbjct: 344 HTVVAHIAMDGHYYIHPDIKQNRSLSVREAARIQSFPDDYFFEG 387
>gi|225862883|ref|YP_002748261.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
gi|225787129|gb|ACO27346.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
Length = 367
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 129/335 (38%), Gaps = 89/335 (26%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
D++ I GGPPCQG S + D +N L + V++ + PK+ ++ENV +L
Sbjct: 71 DIEGIIGGPPCQGFSTVG-----TRDINDERNHLYLEYYRVVKEIMPKFFVIENVKGLLT 125
Query: 505 FSGGFLARYAVGRLVSMDYQ-TRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
+ G + R + Y+ + ++ A YG+PQ R RVF
Sbjct: 126 LNNGMFKEDILNRFGELGYKISDPQVLNAADYGVPQNRQRVFFV---------------- 169
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDE-RKYGTVAR 622
GV+ F+ P E V +A+SDLP++ E +E Y +
Sbjct: 170 -----GVLDGHFE---------YPELDENKVSTLEALSDLPVLDKIEQYNEVYNYSCDPQ 215
Query: 623 TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLP 682
+Q +R ++++N H + + +P G + +DLP
Sbjct: 216 NSYQSIMRKNSNEILN---------------HNQTNHTQQTIDIISMVP--DGGSIKDLP 258
Query: 683 GVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA 742
P+Y ++ + K F R+ +T+ T
Sbjct: 259 ----------------------------PEY---WQVRKYNKAFQRMNSQLPSHTIDTG- 286
Query: 743 QPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+R H S++RV ++RE AR+Q FPD + G
Sbjct: 287 ---HRNYFHYSENRVPSVRECARIQSFPDDFVFIG 318
>gi|420417788|ref|ZP_14916883.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
gi|393030969|gb|EJB32042.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
Length = 362
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 17/173 (9%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VD + GG PCQ S + LED + ++ V+ +KPK + ENV +L+
Sbjct: 101 VDILVGGSPCQSFSSIGN----KLGLEDTRGTLFYDYIRVLNEIKPKVFIFENVYGMLRH 156
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
G S+DY + GI+ A +YG+PQ R R+FL G + +K + P+
Sbjct: 157 DKGKTFEVIQKAFESLDYHYKYGILDARNYGIPQGRRRLFLVGFKEQEKCANFTFPS--- 213
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLS-DAISDLPLVTNNESEDERKY 617
P +E+ + + +++G LLS +AI D E DE+ +
Sbjct: 214 ------P---KELTITMQDLLQDNIKEGNLLSKNAILDTKSFLGGELVDEKYF 257
>gi|288559285|ref|YP_003422771.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1]
gi|288541995|gb|ADC45879.1| DNA-cytosine methyltransferase [Methanobrevibacter ruminantium M1]
Length = 342
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 132/340 (38%), Gaps = 105/340 (30%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VD I GPPCQG S + + D +N + ++ + PK V++ENVV +L
Sbjct: 70 VDVIIAGPPCQGFSMCGK-----REVGDKRNELFQEVVRAVKIINPKIVIIENVVGLLSM 124
Query: 506 ---SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
G + V + Y+T I+ A +G+PQ R RV G+R ++P P
Sbjct: 125 ENVDGEDVKGLIVSEFEKLGYETNYKILDASEHGVPQKRKRVIFIGSRIGD--VEFPKPK 182
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVAR 622
+K V + +A+ ++P TN E DE
Sbjct: 183 ----------------------------DKKVSVMEALGNIP-DTNFEYYDE------PT 207
Query: 623 TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLP 682
FQ+ MA +Y+H + N +R+ +P +G N++D+P
Sbjct: 208 NSFQEL---------------MADGEKKIYNHDAMKHNEKVLKRIENVP--QGGNWQDIP 250
Query: 683 GVL--VG---PDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNT 737
+ VG +N R DP+ + +K +A+K
Sbjct: 251 PEIYDVGGTHSNNYRRLDPNKPSITIK--------HAIK--------------------- 281
Query: 738 VVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+++HP+ +RV+T RE ARLQ PD + + G
Sbjct: 282 ---------SMIIHPTFNRVITAREAARLQSIPDSFIIKG 312
>gi|444912168|ref|ZP_21232333.1| DNA-cytosine methyltransferase [Cystobacter fuscus DSM 2262]
gi|444717076|gb|ELW57911.1| DNA-cytosine methyltransferase [Cystobacter fuscus DSM 2262]
Length = 522
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 149/371 (40%), Gaps = 52/371 (14%)
Query: 446 VDFICGGPPCQGVSGFNR------FRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
+D I GGPPC + R + +P+A D + + ++ + LKP ++MENV
Sbjct: 110 IDLIVGGPPCPAFTRVGRAKLREVYNHPEAFKHDERATLYIEYLKYVRELKPVALVMENV 169
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL-PQY 558
DIL + G + L + Y+ ++ A +YG+PQ R R FL + P +
Sbjct: 170 PDILNWGGHNVGDEICKSLDELGYRCAYTLLNAANYGVPQMRERFFLVAIHKQAGIEPAF 229
Query: 559 PLPTHE-------IVARGVIPNEFQEIIVAYAN---NQPCQ----LEKGVLLSDAISDLP 604
P PT + +R V + A A+ P Q V A++DLP
Sbjct: 230 PTPTRRYEFPLGYLSSRKVALKKVHSPGNAAAHLWYRPPPQSRLDAPPPVSAEQALADLP 289
Query: 605 LVTNNESEDERK----------YGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDH 654
+ + + +R+ YG R ++ + +R + +R + D+
Sbjct: 290 ELKGHLNGMDRRGRRSLDGNLPYGDEPRNDYAQLMRTWPGYMGVGYLRDHVTRCLTMRDY 349
Query: 655 RPFQVNNDD------YERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKP 708
R F+ D YE + A G ++ P+ S E L++
Sbjct: 350 RLFERMRADQDYPKAYELAEQLFTDALAQHEQRTGEVLRPN-------SSEYKKLRA--- 399
Query: 709 LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR--AQPHNRILLHPSQDRVLTIRENARL 766
+Y ++H+ + ++ D T++ ++ I +Q RV+++RE ARL
Sbjct: 400 ---EYVPPYDHKKFPNKWRKMAADAPARTLMAHLGKDTYSHIHYDSNQARVISVREAARL 456
Query: 767 QGFPDCYQLFG 777
Q FPD ++ G
Sbjct: 457 QSFPDGFRFSG 467
>gi|308185228|ref|YP_003929361.1| DNA-cytosine methyltransferase [Helicobacter pylori SJM180]
gi|308061148|gb|ADO03044.1| DNA-cytosine methyltransferase [Helicobacter pylori SJM180]
Length = 368
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 17/173 (9%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VD + GG PCQ S + LED + ++ V+ +KPK + ENV +L+
Sbjct: 107 VDILVGGSPCQSFSSIGN----KLGLEDTRGTLFYDYIRVLNEIKPKVFIFENVYGMLRH 162
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
G S+DY + GI+ A +YG+PQ R R+FL G + +K + P+
Sbjct: 163 DKGKTFEIIQKAFESLDYHYKYGILDARNYGIPQGRRRLFLVGFKEQEKCANFTFPS--- 219
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLS-DAISDLPLVTNNESEDERKY 617
P +E+ + + +++G LLS +AI D E DE+ +
Sbjct: 220 ------P---KELTITMQDLLQDNIKEGNLLSKNAILDTKSFLGGELVDEKYF 263
>gi|419588920|ref|ZP_14124735.1| DNA-cytosine methyltransferase [Campylobacter coli 317/04]
gi|380569022|gb|EIA91476.1| DNA-cytosine methyltransferase [Campylobacter coli 317/04]
Length = 418
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 131/362 (36%), Gaps = 70/362 (19%)
Query: 420 LSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQL 479
+SK K LK+ ++K ++D I GGPPCQ S R R + D +N
Sbjct: 95 VSKIKNNLKKTLSK-----------NIDVIIGGPPCQAYSIIGRARMKNSIENDHRNYLY 143
Query: 480 LVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQ 539
++ + KPK + ENV I G + + Y ++ + A +G+ Q
Sbjct: 144 KYYVKFLNIFKPKIFVFENVPGIKSAGNGKYFDDLKKSIEDIGYSIQIKELIASDFGVLQ 203
Query: 540 FRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDA 599
R R+ + G + KK +Y P E + K + D
Sbjct: 204 NRKRIIIVGFK-IKKNKKYSYPIFEKIE-----------------------NKNYFVKDV 239
Query: 600 ISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQV 659
+SDLP + E + T + K +R + L+ Q +RP
Sbjct: 240 LSDLPKINPGEKIEGLNKYTKKTNSYLKMANIRDANFNILT--QHETRPH---------- 287
Query: 660 NNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEH 719
N+ D E + + + W+ ER+ K P+
Sbjct: 288 NDRDRE--------------------IYKEAILAWNTKRERLCYKKLALTRPELISHKNT 327
Query: 720 QSSTKPFGRLWWD-EIVNTVVTRAQPHNRILLHP--SQDRVLTIRENARLQGFPDCYQLF 776
S T F + + +T++ +HP +Q R L+IRE ARLQ FPD +
Sbjct: 328 NSFTNRFNVIKENTNASHTILAHMAMDGHYYIHPDITQLRSLSIREAARLQSFPDDFYFE 387
Query: 777 GP 778
GP
Sbjct: 388 GP 389
>gi|448497515|ref|ZP_21610468.1| DNA-cytosine methyltransferase [Halorubrum coriense DSM 10284]
gi|445699746|gb|ELZ51766.1| DNA-cytosine methyltransferase [Halorubrum coriense DSM 10284]
Length = 399
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 13/128 (10%)
Query: 443 PGDVDFICGGPPCQGVSGFNRFRNPQAALE----DIKNRQLLVFMDVIEYLKPKYVLMEN 498
P VD + GGPPCQ GF+R N Q L+ D +N F+ V+ L+P+ VLMEN
Sbjct: 99 PDGVDVVIGGPPCQ---GFSRLNNEQIELDEMEKDRRNTLFEEFLRVVSVLEPRLVLMEN 155
Query: 499 VVDILKFSGG---FLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
V D++ ++ V + Y+ ++ A YG+PQ R R+F G + +
Sbjct: 156 VRDLINRQTSDDRYVKDLIVDEFAAHGYKCEYRVLEAEQYGVPQKRRRIFFIGTD--RDV 213
Query: 556 P-QYPLPT 562
P ++P PT
Sbjct: 214 PIRFPEPT 221
>gi|332665156|ref|YP_004447944.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM
1100]
gi|332333970|gb|AEE51071.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM
1100]
Length = 416
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 132/330 (40%), Gaps = 80/330 (24%)
Query: 443 PGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLV-FMDVIEYLKPKYVLMENVVD 501
PG V + GG PCQ S + + D KN L + F+ +++ ++P+ + ENV
Sbjct: 109 PGKVALVVGGAPCQPFSNIGK----KEGENDAKNGDLFLEFVRMVKGIQPEAFIFENVAG 164
Query: 502 ILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLP 561
I++ + +Y + Y ++ A +YG+PQ R R L G + K+ P +PLP
Sbjct: 165 IIQSKHSKVLQYMFEQFQGSGYGLSYALLNAANYGVPQRRERFILIGMKGIKE-PAFPLP 223
Query: 562 THEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVA 621
TH + F + + N P +K V + DA S LP + +S ++
Sbjct: 224 TH--MKDQAAWQNFVKELDQVPNFIP---QKWVSVKDAFSRLP--KDYKSRND------- 269
Query: 622 RTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDL 681
Y+ + DVV HR ++ +G NF+ L
Sbjct: 270 ------YVVMNISDVVK---------------HRMTFIS-------------QGKNFKVL 295
Query: 682 PGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR 741
P ME L P+ +HQ + FGRL D T+ T
Sbjct: 296 P---------------ME---------LRPNCWKSGKHQGNDT-FGRLVADLPSVTIRTA 330
Query: 742 A-QPHNRILLHPSQDRVLTIRENARLQGFP 770
A P + +HP +DR L I E A LQ FP
Sbjct: 331 AYNPAKGMYIHPFEDRGLDIIEMAILQDFP 360
>gi|344942873|ref|ZP_08782160.1| DNA-cytosine methyltransferase [Methylobacter tundripaludum SV96]
gi|344260160|gb|EGW20432.1| DNA-cytosine methyltransferase [Methylobacter tundripaludum SV96]
Length = 359
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 70/137 (51%), Gaps = 26/137 (18%)
Query: 432 TKGYRSNILPL-PGDV-----------DFICGGPPCQGVSGFNRFRNPQAALEDIKNRQL 479
TK Y+ NIL L P ++ D + GGPPCQG F+ R A ++D +N+ +
Sbjct: 53 TKLYQKNILELAPEEIKHAHFMDGAVCDIVLGGPPCQG---FSVHRIKDAGIDDPRNKLI 109
Query: 480 LVFMDVIEYLKPKYVLMENVVDIL-----KFSGGFLARYAVGRLVSMDYQTRLGI-MAAG 533
L + + + LKPK LMENV IL KF F YA G+ YQ + + A
Sbjct: 110 LRYFEYVAVLKPKVFLMENVPGILWSRHKKFLDAF---YAEGK--KAGYQLMQPVTLDAR 164
Query: 534 SYGLPQFRLRVFLWGAR 550
YGLPQ R RVF+ G R
Sbjct: 165 DYGLPQRRKRVFILGIR 181
>gi|420414315|ref|ZP_14913435.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|420419420|ref|ZP_14918510.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
gi|393026649|gb|EJB27746.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|393031326|gb|EJB32398.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
Length = 369
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VD + GG PCQ S + LED + ++ V+ +KPK + ENV +L+
Sbjct: 108 VDILVGGSPCQSFSSIGN----KLGLEDTRGTLFYDYIRVLNEIKPKVFIFENVYGMLRH 163
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
G S+DY + GI+ A +YG+PQ R R+FL G + +K + P+
Sbjct: 164 DKGKTFEIIQKAFESLDYHYKYGILDARNYGIPQGRRRLFLVGFKEQEKCANFTFPS 220
>gi|312200730|ref|YP_004020791.1| DNA-cytosine methyltransferase [Frankia sp. EuI1c]
gi|311232066|gb|ADP84921.1| DNA-cytosine methyltransferase [Frankia sp. EuI1c]
Length = 464
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 140/359 (38%), Gaps = 60/359 (16%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
R ++ L D I GGPPCQ +++ RN ++D +N F+ + ++P L
Sbjct: 90 RERLVDLAAGADMIVGGPPCQ---AYSQVRNHARLIDDPRNSLYREFVRTVREVRPVAFL 146
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
MENV + + G + + +Y ++ A ++G+PQ R R+ G R + +
Sbjct: 147 MENVPGLAQM--GVQDQVVADLSLDGEYDVTAQLVDAANFGVPQTRERLLFLGVRRRRGI 204
Query: 556 PQYPLPTHEIVARGVIPNEFQEIIVAY---------ANNQPCQLE-----KGVLLSDAIS 601
L + +E +AY A+ QL + V ++ AIS
Sbjct: 205 SVPVLDGSGATGLVRLERAKEERALAYKVGVAGGAEADELAAQLADWSSLQAVTVAQAIS 264
Query: 602 DLPLVTNNESEDERKYGTVARTEF----QKYIRLRRHDVVNLSSAQMASRPSLLYDHRPF 657
DL + + +D + RTE Y RL R +V PSL P
Sbjct: 265 DLEGLASGRRDD-----AIERTELGSPGSAYQRLMRRGLVA---------PSLTNVSVP- 309
Query: 658 QVNNDDYERVCCIPKRKGANFRDLPGVLVGPD-NKVRWDPSMERVMLKSGKPLVPDYAMK 716
++ D R+ IP G N RDLP +W +G+ ++
Sbjct: 310 RIREDTVLRLNEIP--AGGNHRDLPDEFRARYLTDAKWGQHS-----GTGR-------LE 355
Query: 717 FEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
H S+ + W +NT A H + R L++RE ARLQ FPD ++
Sbjct: 356 RRHYSAYRRLHPDLWAWTINTKADCA-------YHYRESRSLSVREFARLQSFPDYFEF 407
>gi|328956110|ref|YP_004373443.1| DNA-cytosine methyltransferase [Coriobacterium glomerans PW2]
gi|328456434|gb|AEB07628.1| DNA-cytosine methyltransferase [Coriobacterium glomerans PW2]
Length = 513
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 142/374 (37%), Gaps = 72/374 (19%)
Query: 445 DVDFICGGPPCQGVSGFNRFR---NPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVD 501
D + GGPPCQ S R R + Q +D K ++ IE L P +MENV
Sbjct: 125 DSFILIGGPPCQAYSLVGRSRRTHDRQGLQKDEKQTLYRCYLRFIERLNPDIFVMENVSG 184
Query: 502 ILKFSGGFLARYAVGRLVSMDYQT----------------RLGIMAAGSYGLPQFRLRVF 545
IL LAR V ++ D ++ R I+ A YG+PQ R RV
Sbjct: 185 ILSAK---LARKGVFHMILRDMESAGYRIRSLSKLRAVEPRDYIVDAERYGIPQARHRVV 241
Query: 546 LWGARPFKKL------PQYPLPTHEIVARGVIP------------NEFQEIIVAYANNQP 587
L G R L P++ T G+ P E + +A+A +
Sbjct: 242 LLGLRSHSSLTPSILTPRFAEKTVRDALTGIPPVRSGFSKRSGNMRESWQRYIAHAAKRL 301
Query: 588 CQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASR 647
+G L +S L E++ +R V RT + R R + L + + +R
Sbjct: 302 AGTAEGRALRAELSALSDARFPETQAKRSIVRVQRTPLISWYRARLDGISVLPNHE--AR 359
Query: 648 PSLLYDHRPFQVNNDDYERVCCIPKRKGAN--FRDLPGVLVGPDNKVRWDPSMERVMLKS 705
L D D Y +R G + +D P L+ P++K D + + ++
Sbjct: 360 NHLASDL-------DRYLFCAVFGQRYGYSPKLQDFPASLL-PNHKNALDAKVNKDVI-- 409
Query: 706 GKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPS--QDRVLTIREN 763
++ +F Q +D TV + +HP Q R LT+RE
Sbjct: 410 -------FSDRFRVQ---------IFDRRSMTVTSHISKDGHYYIHPDPVQCRSLTVREA 453
Query: 764 ARLQGFPDCYQLFG 777
ARLQ FPD Y G
Sbjct: 454 ARLQTFPDDYYFEG 467
>gi|197105892|ref|YP_002131269.1| DNA (cytosine-5-)-methyltransferase [Phenylobacterium zucineum
HLK1]
gi|196479312|gb|ACG78840.1| DNA (cytosine-5-)-methyltransferase protein [Phenylobacterium
zucineum HLK1]
Length = 508
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 25/186 (13%)
Query: 438 NILPLPGDVDFICGGPPCQGVSGFNRFR------NPQAALEDIKNRQLLVFMDVIEYLKP 491
++ P+ VD + GGPPCQ + R + +P+A D + R L ++ ++ P
Sbjct: 100 DLGPVEQAVDVLVGGPPCQAFARVGRSKLREIAEHPEAFRLDARARLYLEYLRYVQAFLP 159
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
V+MENV D+L G +A L + Y + ++ A YG+PQ R R+ L R
Sbjct: 160 LAVVMENVPDVLNHGGQNVAEETRTFLEELGYDVKYSLLNAAFYGVPQMRERMILIATR- 218
Query: 552 FKKLP---QYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLE---KGVLLSDAISDLPL 605
++L ++P PTH I E+ YA ++ L+ +G LL A P
Sbjct: 219 -RELGVEIRFPAPTHHI-----------ELPPGYAGSRQVALKLLNQGALLDTAPGYQPA 266
Query: 606 VTNNES 611
++ + S
Sbjct: 267 LSPDRS 272
>gi|448445995|ref|ZP_21590564.1| site-specific DNA-methyltransferase (cytosine-specific) [Halorubrum
saccharovorum DSM 1137]
gi|71361889|gb|AAZ30053.1| C5-cytosine methyltransferase [Halorubrum saccharovorum]
gi|445684605|gb|ELZ36979.1| site-specific DNA-methyltransferase (cytosine-specific) [Halorubrum
saccharovorum DSM 1137]
Length = 408
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 141/357 (39%), Gaps = 103/357 (28%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
GD+D ICG PPCQ SG R +P + + K+ L +++ IE P V ENV +I+
Sbjct: 97 GDIDVICGCPPCQNFSGL-RDTDPWPSGKP-KDNLLRAYVEFIEEEIPDVVFFENVSNIM 154
Query: 504 KFSGGFLARYA---VGRLVSM----------DYQTRLGIMAAGSYGLPQFRLR---VFLW 547
Y V R+ +M Y L ++ A +YG+PQ R R +F++
Sbjct: 155 NAGEEVPTDYIDWLVRRMATMTRSEDTLDNGGYGYELDVVNAANYGVPQKRNRTIGMFVY 214
Query: 548 GARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVT 607
GA + P PTH ++ P
Sbjct: 215 GAEDSDI--ELPEPTH-------------------------------------AESP--- 232
Query: 608 NNESEDERKYGTVARTEFQKYIRLRRHDV---VNLSSAQMA-----SRPSLLYDHRPFQV 659
+ ED RK+ TV T +RR D+ ++L Q+ P+ HR +
Sbjct: 233 -GDDEDLRKWTTVRDT-------IRRDDLKEDLDLGQKQVGIDGYPDDPA----HRAHRH 280
Query: 660 NNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEH 719
+ + + I +R G ++RDL G E ++ + + L +
Sbjct: 281 QDSTVKMIRAI-RRHGGSWRDLRGT------------EDENLIKECHQNL---------N 318
Query: 720 QSSTKPFGRLWWDEIVNTVVTR-AQPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
++ +G + WDE T+ TR + HPS+DR +T RE A L FP Y+L
Sbjct: 319 SGASSAYGIMNWDEPAPTMTTRCTNVSSGRFTHPSEDRGITFREAALLMDFPIWYEL 375
>gi|428299006|ref|YP_007137312.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
gi|428235550|gb|AFZ01340.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
Length = 438
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 142/342 (41%), Gaps = 86/342 (25%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV--VD 501
G++ + GGPPCQG S + + L+D +N+ +L F++++ L P +MENV ++
Sbjct: 79 GEIAAVIGGPPCQGFSVAGKQK-----LDDDRNQLVLKFINLVIELNPSMFVMENVPAIE 133
Query: 502 ILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLP 561
KF+G + A+ L+ Y ++ A YG+PQ R R +W
Sbjct: 134 WKKFAG--ITGNAIA-LIEEQYILSKWLLTASDYGVPQKRQRA-IW-------------- 175
Query: 562 THEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVA 621
I ++F E+I P + +K V + DAISDL + N D + G
Sbjct: 176 ---------IGSKFGEVI------PPLESDKKVTVGDAISDLSYIPINSQTDTWELG--E 218
Query: 622 RTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDL 681
+ E+ +Y+ D + S+ + R L DH C+ K D+
Sbjct: 219 KGEYAEYL-----DKIFTSTLRRRLRAGRLSDHP-------------CVSKS-----LDI 255
Query: 682 PGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR 741
G + + + KP E +S+T + RL D T+ R
Sbjct: 256 SGF------QATVHTAATQQKYTDTKP--------GEKESTTWAY-RLVSDGFSPTL--R 298
Query: 742 AQPHNRIL---LHPSQDRVLTIRENARLQGFPDCYQLFGPVK 780
A NR +H RV+T+RE ARL FPD + FG K
Sbjct: 299 AGSGNRTAARPIHYEHARVITVREAARLHSFPDWFD-FGTSK 339
>gi|423349093|ref|ZP_17326749.1| DNA (cytosine-5-)-methyltransferase [Scardovia wiggsiae F0424]
gi|393703322|gb|EJD65523.1| DNA (cytosine-5-)-methyltransferase [Scardovia wiggsiae F0424]
Length = 417
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 127/335 (37%), Gaps = 70/335 (20%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL-- 503
+D I GGPPCQ S R R+ + D +N +++ + ++ +PKY + ENV+ +L
Sbjct: 108 LDLIIGGPPCQAYSLVGRARDENSMTGDKRNYLYVLYAEFLKRYRPKYFVFENVIGLLSA 167
Query: 504 KFSGGFLARYAVGRLV-SMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
K G L + L S+ Y ++ A YG+ Q R R+ L G L
Sbjct: 168 KDIDGKLHFIKMQDLFSSIGYSIEYDVLNAKDYGVLQNRKRIILIG----------KLGN 217
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVAR 622
H + F L+ + +DLP V + E E +
Sbjct: 218 HSKFYPNIPKGHFD-----------------CLVREIFTDLPKVKSGEGEWFAVKTSHYY 260
Query: 623 TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCI--PKRKGANFRD 680
E+ ++ +D S Q SRP+ D + Y RV +RK + D
Sbjct: 261 GEYLYAAGIKSYD--RESVTQQCSRPNTEQDL-------EIYNRVVMSWNKERKRLRYND 311
Query: 681 LPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVT 740
LP L N + + +F+ + P+ + TVV
Sbjct: 312 LPDRLRSQKN-------------------ITSFCDRFKVVADNLPYSQ--------TVVA 344
Query: 741 RAQPHNRILLHP--SQDRVLTIRENARLQGFPDCY 773
+HP +Q+R LT RE ARLQ FPD Y
Sbjct: 345 HMSKDGHYFIHPDINQNRSLTPREAARLQTFPDNY 379
>gi|197124335|ref|YP_002136286.1| DNA-cytosine methyltransferase [Anaeromyxobacter sp. K]
gi|196174184|gb|ACG75157.1| DNA-cytosine methyltransferase [Anaeromyxobacter sp. K]
Length = 508
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 87/215 (40%), Gaps = 30/215 (13%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAA----LEDIKNRQLLVFMDVIEYLKPKYVLMENVVD 501
+D + GGPPCQG S R + A D +N FM+ + +PK +++ENV
Sbjct: 80 LDILIGGPPCQGFSRIGRGKLASLAGSRTAHDPRNTLYFAFMEAADRWQPKAIVIENVPG 139
Query: 502 ILKFSGGF---------LARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP- 551
+L A A LV+ Y+ ++ A YG+PQ R R+F G R
Sbjct: 140 MLSVDVNSSSHPEEDLSFAEKAASDLVARGYRAGFAVLNAAMYGVPQLRERIFFIGIRKD 199
Query: 552 FKKLPQYPLPTHEIVARG--VIPNE-----FQEIIVAYANNQPCQLEKGVLLSDAISDLP 604
P P TH I +P+ F +I + + + + DAI DLP
Sbjct: 200 LAVRPSVPPSTHLIGTPSGYTVPSAELFLPFDDIHHDLSVDTSKASSRATTVRDAIGDLP 259
Query: 605 LVTNNES---------EDERKYGTVARTEFQKYIR 630
+ + + +R Y A +EF + +R
Sbjct: 260 PIEEHLTPGSSSRPAFRTKRSYAGPAASEFAQLMR 294
>gi|421875759|ref|ZP_16307343.1| DNA-cytosine methyltransferase family protein [Brevibacillus
laterosporus GI-9]
gi|372455266|emb|CCF16892.1| DNA-cytosine methyltransferase family protein [Brevibacillus
laterosporus GI-9]
Length = 405
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 145/366 (39%), Gaps = 95/366 (25%)
Query: 436 RSNILPLPGD--VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKY 493
RS + GD +D I GGPPCQG S + D +N+ L ++ +++ +KPKY
Sbjct: 63 RSTLNEFLGDTRIDVIVGGPPCQGFS-----LTGKRDENDPRNKLFLDYLKIVKMVKPKY 117
Query: 494 VLMENVVDILKF--------SGGFLARYAVGRLVS-----MDYQTRLGIMAAGSYGLPQF 540
++ENV IL + SG V ++ Y ++ A YG+PQ
Sbjct: 118 FVIENVEGILSYKVKKLKGISGTIYEDELVPNIIQKETEKFGYFVEHKLLNAKDYGVPQN 177
Query: 541 RLRVFLWGARPFK------KLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGV 594
R RV +G R K + P++P E Q ++V
Sbjct: 178 RPRVIFFGTRIIKNRKNKLQKPKFP--------------EKQNLVVT------------- 210
Query: 595 LLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSL-LYD 653
+ DAISDL + N + R Y +L R+ + SA PS+ L++
Sbjct: 211 -VEDAISDLRFLKNGQESANYN----VRYNVTAYQQLLRNGIT--PSANGEPIPSIELHN 263
Query: 654 HRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDY 713
H+ + + +R K++ S+ +++ + L P+
Sbjct: 264 HKASKHQDKTVKRF----------------------EKLKSGESVGQLLER----LTPEE 297
Query: 714 AMKFEHQSSTKPF--GRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPD 771
F +TK + +L + TV+T P + + R+LT+RE ARLQ F D
Sbjct: 298 LEYF----NTKKYRCAKLEGSSVSPTVLT--LPDDIVHYDKGNPRILTVREFARLQSFDD 351
Query: 772 CYQLFG 777
+ +G
Sbjct: 352 SFVFYG 357
>gi|296329951|ref|ZP_06872435.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305676676|ref|YP_003868348.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296152990|gb|EFG93855.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305414920|gb|ADM40039.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 488
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 144/383 (37%), Gaps = 69/383 (18%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAAL-EDIKN--RQLLV--FMDVIEYLKPKYVLMEN 498
GD+D + GGPPCQ S R+ + E +KN R L F++++ YLKP +V+ EN
Sbjct: 75 GDIDVVIGGPPCQTFSLAGPARSGTKEMREKLKNDPRNTLYKHFIEIVNYLKPIFVVFEN 134
Query: 499 V-----------------VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFR 541
V V +++ L V R ++ A +G+PQ R
Sbjct: 135 VEGMLSKKVDHEGVENKQVQVIELICDELESKGYSTKVENSLSERFQVLNAADFGVPQHR 194
Query: 542 LRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAIS 601
R+F+ R P+ PTH P F V + P +L K + +S+ +
Sbjct: 195 RRIFIIANRLGIDSPRLK-PTHG-------PEGFPYKTVGEIQHLPVRLPK-ISISEKLK 245
Query: 602 DLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQ--------MASRPSLLYD 653
++ ++T+N + + + F K I+ + S Q + L+ D
Sbjct: 246 NIDVITDNYKK--------SLSLFIKNIKELADTDNHFGSRQGLKKLYHKLNKEYKLIKD 297
Query: 654 HRPFQVNN--------DDYERVCCI-----------PKRKGANFRDLPGVLVGPDNKVRW 694
+ + NN +D C I + + NFRD+ + VG
Sbjct: 298 KKTHKFNNLLSFLEKYNDLVNECGINTFGDNKFLANHQSREHNFRDIV-IFVGTKQGSNS 356
Query: 695 DPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQ 754
M R + L D + + + W++ NT++ + +HP Q
Sbjct: 357 SRFMNRDSEDYNEFL--DTLYPYNRSKHRDTYVKQSWNKPSNTILAHMEKDGLKFIHPEQ 414
Query: 755 DRVLTIRENARLQGFPDCYQLFG 777
R LT E LQ FP Y G
Sbjct: 415 PRTLTPYEAQLLQSFPSDYTFCG 437
>gi|404491989|ref|YP_006716095.1| DNA cytosine C5-methyltransferase, M.Sac I family [Pelobacter
carbinolicus DSM 2380]
gi|77544117|gb|ABA87679.1| DNA cytosine C5-methyltransferase, M.Sac I family [Pelobacter
carbinolicus DSM 2380]
Length = 405
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 68/129 (52%), Gaps = 10/129 (7%)
Query: 444 GDVDFICGGPPCQGVSGFNRF-RNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDI 502
G+ + GGPPCQ S + + L+D + L ++ V++ L PK LMENV I
Sbjct: 70 GEASLLIGGPPCQPFSKAAYWVKGDTKRLDDPRADTLTAYLRVLKDLTPKAFLMENVFGI 129
Query: 503 LKFSGGFLARYAVGRLVS-------MDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ G A + R+V+ Y LG++ A +YG+PQ R RVF+ G+R K+
Sbjct: 130 -TYKGKDEAIQLLRRIVNEINREKGTKYTFSLGVLNAANYGVPQVRERVFIVGSRDGKEF 188
Query: 556 PQYPLPTHE 564
Q+P PTH+
Sbjct: 189 -QFPEPTHQ 196
>gi|376001427|ref|ZP_09779297.1| DNA (cytosine-5-)-methyltransferase [Arthrospira sp. PCC 8005]
gi|375330256|emb|CCE15050.1| DNA (cytosine-5-)-methyltransferase [Arthrospira sp. PCC 8005]
Length = 387
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 138/358 (38%), Gaps = 88/358 (24%)
Query: 427 LKEFVTKGYRSNILPLPGD--VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMD 484
L+E T+ R L GD ++ ICGGPPCQG S N D +N L F+
Sbjct: 59 LREISTEQIRE----LIGDRHINLICGGPPCQGFSTIGSNNN-----LDKRNFLFLEFLR 109
Query: 485 VIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRV 544
+E L+P Y+++ENV +L + L ++ Y + +++A YG+P+ R R
Sbjct: 110 FVEQLQPDYIIIENVTGLLSRKNENTLTSILTCLQNIGYTVDVRVLSAHHYGVPEKRRRT 169
Query: 545 FLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLP 604
G R F YP P +FQ+ N+P + LP
Sbjct: 170 IFLGNR-FGVPNLYPSP------------QFQD-------NEP-----------DLDFLP 198
Query: 605 LVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDY 664
+ G + + HD LS+AQ+ N+ +
Sbjct: 199 AA--------KTVGFAWENWLEYQGKTYNHD---LSTAQIP--------------NHLER 233
Query: 665 ERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTK 724
+R+ IP+ KG ++ PD + P + + D+ E +
Sbjct: 234 QRIQHIPEGKGVRYQ--------PDQQAYLPPELWYDI---------DWEKLRESRFRET 276
Query: 725 PFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
RL D T+ T + HP+++R LT RE A +Q FP + +G V ++
Sbjct: 277 KLKRLARDSYSPTINTSRTTY----YHPTENRYLTPREAAAIQSFPPNFIFYGTVTQQ 330
>gi|418062114|ref|ZP_12699924.1| DNA-cytosine methyltransferase [Methylobacterium extorquens DSM
13060]
gi|373564331|gb|EHP90450.1| DNA-cytosine methyltransferase [Methylobacterium extorquens DSM
13060]
Length = 483
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 145/372 (38%), Gaps = 70/372 (18%)
Query: 449 ICGGPPCQGVSGFNRFRNPQAALEDIKNRQ--------LLVF---MDVIEYLKPKYVLME 497
+ GGPPCQ + R A L + RQ +L+F + +E ++P V ME
Sbjct: 101 LVGGPPCQAYARVGR-----AKLRSVAARQDAHLDDPRVLLFRHWLRFVEAIRPHAVAME 155
Query: 498 NVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP-FKKLP 556
NV+D L G + LVS+ Y R IM A YG+PQ R R FL R P
Sbjct: 156 NVLDCLSVGGRNVMEETAEALVSLGYVPRYTIMNAVHYGVPQMRDRAFLLAYRQDLGVEP 215
Query: 557 QYPLPT--HEIVARGVIPNEFQEIIVAYAN--------NQPCQ-LEKGVLLSDAISDLPL 605
+P PT H++ +G + + A A P L +AI DLP
Sbjct: 216 VFPEPTRAHDL-PKGYLHSRHVATSGAGAAASRFFVPPRHPLSGLPPATTAGEAIGDLPR 274
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
+++ K G + + Y R DV + ++ ASR L P +
Sbjct: 275 FAGSKAAGATK-GRRSTGDLAAY----RADV---APSEYASR---LRSGAPDGGTSGHVT 323
Query: 666 R------VCCIPKRKGANF--------RDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVP 711
R V C G+ + R L + G R P E L++G +VP
Sbjct: 324 RAIGRDAVLCGLMPPGSEYPAAHAIAERLLSEEIAGRAAMGRPVPDCELPALRAG--IVP 381
Query: 712 DYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPH------NRILLHPSQDRVLTIRENAR 765
H T P WW + + H ++I +Q RV+++RE AR
Sbjct: 382 ------PHPPHTFP--NRWWKLVADRPTRTLLAHLGKDGYSQIHYDDAQGRVISVREAAR 433
Query: 766 LQGFPDCYQLFG 777
LQ FPD ++ G
Sbjct: 434 LQSFPDGFRFEG 445
>gi|126657178|ref|ZP_01728344.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. CCY0110]
gi|126621449|gb|EAZ92160.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. CCY0110]
Length = 433
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 130/333 (39%), Gaps = 64/333 (19%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQG S + +LED +N + F+ ++ L+PKY ++ENV +
Sbjct: 76 IDVVFGGPPCQGFSLMGK-----RSLEDGRNSLVKHFIRLVIELQPKYFIIENVPGMTIG 130
Query: 506 SGGFLARYAVGRLVSMDYQTRLGI--MAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
+YQ + + A +YG+PQ R R+FL GA+ LP YP
Sbjct: 131 KHKIFLEEIFNEFAKNNYQVKTDYQNLNAANYGVPQLRERLFLLGAKQGLILPNYP---- 186
Query: 564 EIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVART 623
+ Y L + DAI DLP V + + R +
Sbjct: 187 -------------NFVTQYNQQDNLFLPTTPNVKDAIQDLPEVNHYPELNYRDWVIADYG 233
Query: 624 EFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPG 683
+ Y++ R D+ N+ SR +Y+ + + I + F + P
Sbjct: 234 KPSGYVKNLR-DLSNVIDDYSYSR---IYNKQLLTASLRTKHTQKSIDR-----FNNTPQ 284
Query: 684 VLVGPDNK-VRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRA 742
+ P ++ ++ P L++G P + + H +S +P
Sbjct: 285 GKIEPISRFLKLHPDGFCNTLRAGTP-----SNRGAH-TSPRP----------------- 321
Query: 743 QPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
+HP R +T+RE ARL +PD ++
Sbjct: 322 -------IHPFTPRCITVREAARLHSYPDWFRF 347
>gi|420489567|ref|ZP_14988159.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-11]
gi|420523508|ref|ZP_15021926.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-11b]
gi|393104988|gb|EJC05539.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-11]
gi|393125857|gb|EJC26309.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-11b]
Length = 368
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 17/173 (9%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VD + GG PCQ S + LED + ++ V+ +KPK + ENV +L+
Sbjct: 107 VDILVGGSPCQSFSSIGN----KLGLEDTRGTLFYDYIRVLNEIKPKVFIFENVYGMLRH 162
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
G S+DY + GI+ A +YG+PQ R R+FL G + +K + P+
Sbjct: 163 DKGKTFEIIQKAFESLDYHYKYGILDARNYGIPQGRRRLFLVGFQEQEKCANFTFPS--- 219
Query: 566 VARGVIPNEFQEIIVAYANNQPCQLEKGVLLS-DAISDLPLVTNNESEDERKY 617
P +E+ + + +++G LLS +AI D E DE+ +
Sbjct: 220 ------P---KELTITMQDLLQDNIKEGNLLSKNAILDTKSFLGGELVDEKYF 263
>gi|385800071|ref|YP_005836475.1| DNA-cytosine methyltransferase [Halanaerobium praevalens DSM 2228]
gi|309389435|gb|ADO77315.1| DNA-cytosine methyltransferase [Halanaerobium praevalens DSM 2228]
Length = 328
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 23/188 (12%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
DVD I GGPPCQG S R + +ED +N F+ ++ +KP+ ++ENV + +
Sbjct: 69 DVDVIVGGPPCQGFSLAGRI--GRTFIEDDRNYLFNEFVRIVSIVKPEMFILENVARMAR 126
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFK-KLPQY----- 558
+ G + +DY + ++ YG+PQ R R+ + G + + + P+
Sbjct: 127 HNNGNTIIEIINEFKKIDYDVKYEVLQTSDYGIPQRRKRIIIVGTKDYTFEFPKKNNSVI 186
Query: 559 -------PLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAIS--DLPLVTNN 609
LPT + IPN N+ LEK + D D+P
Sbjct: 187 TVKDAIDDLPTLKSAEESNIPNH------NAMNHSDQMLEKMSYIKDGGDRYDIPEKLRP 240
Query: 610 ESEDERKY 617
E+ D RKY
Sbjct: 241 ETGDARKY 248
>gi|440683449|ref|YP_007158244.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
gi|428680568|gb|AFZ59334.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
Length = 449
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 130/348 (37%), Gaps = 89/348 (25%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVD--- 501
++D + GGPPCQG S + L+D +N + ++ ++ L+PK+V++ENV
Sbjct: 100 EIDVLFGGPPCQGFSLIGK-----RLLDDPRNSLVFHYIRLVLELQPKFVVLENVKGMTV 154
Query: 502 ------ILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
IL+ F A + V DYQ ++ A +YG+PQ R R+FL R L
Sbjct: 155 GKHREFILEVISAFAA---INYKVYQDYQ----VLNAANYGVPQNRERLFLLACRQDLDL 207
Query: 556 PQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P YP P + + N QL + A+ DLP++ N
Sbjct: 208 PNYPQPITTYIKKKKAINN--------------QLLLTPSVKKALQDLPIIEN------- 246
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
Y L D + L+ +SR + + NN Y+R+
Sbjct: 247 ------------YPELYEQDWI-LADFGKSSRYVQRLNGFNSKFNNYSYKRI-------- 285
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLW---WD 732
+DP + L++ V +P R + +
Sbjct: 286 ------------------YDPKILTSSLRTKHTEVSIQRFAETLPGKIEPISRFYKLDYK 327
Query: 733 EIVNTVVTRAQPHNRIL-----LHPSQDRVLTIRENARLQGFPDCYQL 775
I NT+ + +HP R +T+RE ARL +PD ++
Sbjct: 328 GICNTLRAGTASNKGAFTSPRPIHPFIPRCITVREAARLHSYPDWFRF 375
>gi|237742048|ref|ZP_04572529.1| site-specific DNA-methyltransferase [Fusobacterium sp. 4_1_13]
gi|229429696|gb|EEO39908.1| site-specific DNA-methyltransferase [Fusobacterium sp. 4_1_13]
Length = 440
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 153/358 (42%), Gaps = 78/358 (21%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDI-- 502
++D I GGPPCQG S R + + DI+N ++ V+ +KPKY++ ENV I
Sbjct: 94 EIDAIFGGPPCQGFS-----RAGKQEVNDIRNLLFKEYLRVVSEIKPKYLVFENVPGIVD 148
Query: 503 LKFSG--------GFLARYAVGRLVSMDYQTRLG-------IMAAGSYGLPQFRLRVFLW 547
+KF + + A+ + + ++G I+ A +YG+PQ R R+ L
Sbjct: 149 IKFKNFISDFNNESYKNKNAID--IIRNELKKIGYNLLEPRILNASNYGVPQNRHRLILI 206
Query: 548 GARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVT 607
G R K P+Y P EF++ V L +A+SDL
Sbjct: 207 GFRNDMKEPKY-------------PKEFKQ---------------KVTLREALSDLT--- 235
Query: 608 NNESEDERKYGTVARTEFQKYI--------RLRRHDVVNLSSAQMASRPSLLYDHRPFQV 659
N D +KY ++ K I + + ++ ++ + R SLL + +
Sbjct: 236 -NYELDNKKYQNSSKKGRTKNIVTNETILEKKKYNNDLSKHYNYIEERFSLLNEG---ES 291
Query: 660 NNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEH 719
N+ +R+ + G P +L N++ S ++K K L + +
Sbjct: 292 NSQLRKRLI----KNGLEITKYPNLLEYLSNRLIISKSE---IVKKCKNLSKENKLLDLI 344
Query: 720 QSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+ +L+ D+ NTV+T P + IL P +R+ ++RE ARLQ F D + +G
Sbjct: 345 VTKKNSRIKLYLDKPSNTVLT--LPDDLIL--PICNRICSVREFARLQSFDDSFVFYG 398
>gi|399521929|ref|ZP_10762594.1| Site-specific DNA-methyltransferase [Pseudomonas pseudoalcaligenes
CECT 5344]
gi|399109964|emb|CCH39154.1| Site-specific DNA-methyltransferase [Pseudomonas pseudoalcaligenes
CECT 5344]
Length = 544
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 124/357 (34%), Gaps = 119/357 (33%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL- 503
++D I GGPPCQ S + + A D + L F+D+ ++P Y+++ENV +L
Sbjct: 216 EIDVIIGGPPCQAFSTAGK----RKAFNDERGNAFLKFIDLALEIRPPYIVIENVRGLLS 271
Query: 504 ---------------------KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ GG L + + +L + Y + + + ++G PQ R
Sbjct: 272 CPMDHRPHDQRGPDFPDLSLDEMKGGAL-NFVLSKLSNAGYASSFNLYNSANFGTPQIRE 330
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISD 602
RV II+ + +P
Sbjct: 331 RV---------------------------------IIICSRDGKPA-------------- 343
Query: 603 LPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNND 662
P +T SED + RT Q L H+ +N ++
Sbjct: 344 -PFLTPTHSEDGAQGLPAWRTVRQALEGLNNHNHLNFPEKRL------------------ 384
Query: 663 DYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSS 722
+ R+ + G N+R+LP + + KS F
Sbjct: 385 RFYRLL----KAGQNWRNLP------------EDQQREALGKS----------YFAGGGK 418
Query: 723 TKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPV 779
T RL WD+ T+VT L HP DR L+I E R+Q FPD +QL GP+
Sbjct: 419 TGFLRRLAWDKPSPTLVTHPAMPATDLAHPEADRPLSIEEYKRIQEFPDDWQLAGPL 475
>gi|448382790|ref|ZP_21562285.1| modification methylase XorII [Haloterrigena thermotolerans DSM
11522]
gi|445661259|gb|ELZ14050.1| modification methylase XorII [Haloterrigena thermotolerans DSM
11522]
Length = 361
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+VD + GGPPCQG S + R+P +D +N LL + + I L P Y +MENV ++
Sbjct: 73 EVDIVTGGPPCQGFSVMGK-RDP----DDERNNLLLKYAEHISGLSPDYFVMENVKGLMS 127
Query: 505 FSGGFLARYAVGRLVSMDYQT--RLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
+ + S Y + ++ A +G+PQ+R RV + G R P YP P
Sbjct: 128 GDKREFLEEFLNEIRSAGYNIVEPIQVLDAAEFGVPQYRERVIVLGYRDTCPKPSYPTPD 187
Query: 563 HEIV----ARGVIPNEFQEI 578
V A G +PN ++
Sbjct: 188 DSNVNSWDAIGDLPNNLDDV 207
>gi|303310981|ref|XP_003065502.1| DNA (cytosine-5)-methyltransferase, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240105164|gb|EER23357.1| DNA (cytosine-5)-methyltransferase, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 1117
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 415 EPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDI 474
E +K + +G S+++ G V+FI G PCQG S N + + +L +
Sbjct: 655 EDVKLFRGSVDDFLAVAIRGQGSDLVAKLGQVEFISAGSPCQGYSLANSRKGNKVSLRN- 713
Query: 475 KNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRL----VSMDYQTRLGIM 530
+ + +++ +P+Y ++ENV + + R + +L V + YQ RL +
Sbjct: 714 -SSMIASVAAYVDFYRPQYAILENVPAMASKTH---ERNPLSQLICAFVGLGYQLRLMHL 769
Query: 531 AAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
A SYG PQ R R+FL A P +LP++P TH
Sbjct: 770 DAWSYGAPQSRSRLFLLIAAPGLQLPEHPALTH 802
>gi|434387116|ref|YP_007097727.1| DNA-methyltransferase Dcm [Chamaesiphon minutus PCC 6605]
gi|428018106|gb|AFY94200.1| DNA-methyltransferase Dcm [Chamaesiphon minutus PCC 6605]
Length = 426
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
D+D + GG PCQG S + ED +N+ + ++ ++ L PKY + ENV +
Sbjct: 73 DIDVVFGGAPCQGFSLMGK-----RVFEDPRNQLVFHYVRLVRELNPKYCVFENVKGLTL 127
Query: 505 FSGGFLARYAVGRLVSMDYQ--TRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
+ L Y T ++ A YG+PQ R R+FL GAR KLP+YP P
Sbjct: 128 GKHAQFLDELITALGDAGYTVLTPYKVLNAADYGVPQDRRRLFLIGARKDMKLPEYPKPN 187
Query: 563 HEIVA 567
+ V
Sbjct: 188 QDRVT 192
>gi|448494453|ref|ZP_21609440.1| DNA-cytosine methyltransferase [Halorubrum californiensis DSM
19288]
gi|445689288|gb|ELZ41528.1| DNA-cytosine methyltransferase [Halorubrum californiensis DSM
19288]
Length = 389
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 13/128 (10%)
Query: 443 PGDVDFICGGPPCQGVSGFNRFRNPQAALE----DIKNRQLLVFMDVIEYLKPKYVLMEN 498
P VD + GGPPCQ GF+R N Q L+ D +N F+ V+ L+P+ VLMEN
Sbjct: 89 PDGVDVVIGGPPCQ---GFSRLNNEQIELDEMEKDRRNTLFEEFLRVVSVLEPQLVLMEN 145
Query: 499 VVDILKFSGG---FLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
V D++ ++ V + Y+ ++ A YG+PQ R R+F G + +
Sbjct: 146 VRDLINRQTSDDRYVKDLIVDEFAAHGYKCEYRVLEAEQYGVPQKRRRIFFMGTD--RDV 203
Query: 556 P-QYPLPT 562
P ++P PT
Sbjct: 204 PIRFPEPT 211
>gi|261381417|ref|ZP_05985990.1| DNA (cytosine-5-)-methyltransferase [Neisseria subflava NJ9703]
gi|284795594|gb|EFC50941.1| DNA (cytosine-5-)-methyltransferase [Neisseria subflava NJ9703]
Length = 420
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 130/341 (38%), Gaps = 75/341 (21%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK- 504
+D I GGPPCQ S R + L D +N + + ++ +PKY + ENV+ +L
Sbjct: 110 LDLIVGGPPCQAYSLVGRSCDSNKMLGDKRNYLYKFYGEFLQRYQPKYFVFENVLGLLSA 169
Query: 505 --FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
+G + + + Y+T I+ A YG Q R R+ L G R +
Sbjct: 170 KDANGNYYFQEMRNLFKKLGYETEYRILNANDYGALQARKRIILVGRRGHQT-------- 221
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEK-GVLLSDAISDLPLVTNNESEDERKYGTVA 621
G P +++K VL+++ +DLP + E G+V
Sbjct: 222 ------GFYPQ--------------LEIDKPNVLVNEIFTDLPAIHAGE-------GSVR 254
Query: 622 RTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPF-QVNNDDYERVCCIPKRKG--ANF 678
+ +KY HD S + P + RP Q ++ Y V + R+G +
Sbjct: 255 PCKMKKYTGKWLHD----SGIKNNDIPVTWHIARPLNQQDSKIYRLVTDLWSREGKRMEY 310
Query: 679 RDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTV 738
DLP L N+ + +R + +G + H TV
Sbjct: 311 NDLPENLKTHKNRTAF---ADRFKVVAGN-------LSASH-----------------TV 343
Query: 739 VTRAQPHNRILLHPS--QDRVLTIRENARLQGFPDCYQLFG 777
+ +HP Q+R +T RE ARLQ FPD Y G
Sbjct: 344 LAHLAKDGHYYIHPDSYQNRSITPREAARLQTFPDDYYFEG 384
>gi|220903553|ref|YP_002478865.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219867852|gb|ACL48187.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 308
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
D D I GG PCQG S N RN + D +N + V+ +PK+ L ENV IL
Sbjct: 61 DSDIIIGGFPCQGFSVANIKRN----ISDERNTLYKHLLRVVSAKQPKFFLAENVKGILS 116
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP-FKKLPQYPLPTH 563
G + + + ++ Y +L ++ A YG+PQ R RVF+ G R + YP TH
Sbjct: 117 LGKGHVIQMILNDFENIGYTMQLKLLNAADYGVPQTRQRVFIAGVRKDLDVIFTYPDATH 176
Query: 564 EIVARG 569
G
Sbjct: 177 SCEGTG 182
>gi|334117372|ref|ZP_08491463.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
gi|333460481|gb|EGK89089.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
Length = 420
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 134/339 (39%), Gaps = 68/339 (20%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
++D + G PCQG S + ++D +N + F ++ LKPK+ +MENV I
Sbjct: 78 EIDVVISGSPCQGFSMMGK-----RDVDDPRNSLIFHFQRLVLELKPKFFVMENVPGIAS 132
Query: 505 FSGGFLARYAVGRLVSMDYQTR--LGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
L + + Y+ ++ A YG+PQ R R+FL G + +LP+YP T
Sbjct: 133 GEHKELLNILISSFMEAGYKVEENYQVLNAVHYGVPQARKRLFLIGCKKDYELPKYPQQT 192
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVAR 622
I+ R +P ++++ L + DAI DLP
Sbjct: 193 -TILPRIKVPKRYKKV----------NLPAVPTVWDAIGDLP------------------ 223
Query: 623 TEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLP 682
E +KY L D V + ++ S++ R +DDY + R+
Sbjct: 224 -EVEKYSELLHRDWVIAEYGKSSTYASIM---RGIDGLDDDY-----------SYDREYD 268
Query: 683 GVLVGPDNKVRWD-PSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTV--- 738
++ + + MER +A K + F +L + + NT+
Sbjct: 269 RQILSCSLRTKHSLECMERF-----------HAAKHGEKEPISRFYKLHPEGVCNTLRAG 317
Query: 739 --VTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
R + +HP R +T+RE ARL +PD ++
Sbjct: 318 TDRARGAYTSPRPIHPIAPRCITVREAARLHSYPDWFRF 356
>gi|237703954|ref|ZP_04534435.1| DNA-cytosine methyltransferase [Escherichia sp. 3_2_53FAA]
gi|226901866|gb|EEH88125.1| DNA-cytosine methyltransferase [Escherichia sp. 3_2_53FAA]
Length = 367
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 8/110 (7%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
G++D I GGPPCQG F+ R A ++D +N+ LL + D + KPK L+ENV +L
Sbjct: 44 GELDMILGGPPCQG---FSSHRINDAGVDDPRNKLLLRYFDFVCEFKPKAFLVENVSGLL 100
Query: 504 -KFSGGFLARYAVGRLVSMDYQTRLG--IMAAGSYGLPQFRLRVFLWGAR 550
K L R+ L S + T + ++ A YG+PQ R RVF+ G R
Sbjct: 101 WKRHEAHLKRFKF--LASKNGYTLIHCDVLNARDYGVPQNRKRVFIAGVR 148
>gi|284928852|ref|YP_003421374.1| DNA-methyltransferase Dcm [cyanobacterium UCYN-A]
gi|284809311|gb|ADB95016.1| DNA-methyltransferase Dcm [cyanobacterium UCYN-A]
Length = 422
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 7/117 (5%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
++D + GGPPCQG S + RNP+ D +N + F+ ++ L+PKY ++ENV +
Sbjct: 75 EIDVVFGGPPCQGFSLIGK-RNPK----DNRNNLIKHFIRLVIELQPKYFVIENVPGMAT 129
Query: 505 FSGGFLARYAVGRLVSMDY--QTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ ++ +Y +T I+ A +YG+PQ R R+F+ G + LP YP
Sbjct: 130 KNNQAFLEEIFDEFIANNYRIETNYKILNAANYGVPQIRKRLFIMGGKSDLPLPDYP 186
>gi|421717992|ref|ZP_16157293.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
gi|407222784|gb|EKE92582.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
Length = 439
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
+ L D ICGGPPCQG S FR A D +N+ F+DVI+ +KPK ++ ENV
Sbjct: 263 IALEQGADIICGGPPCQGFS-MAGFR----ADNDPRNQLFRDFIDVIKKVKPKIIVFENV 317
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR 550
+L + G + + + Y T +M+A +G+ Q R RV + AR
Sbjct: 318 EGLLSYQKGKIYKEIHQLFSELGYNTNGRVMSANEFGVSQKRKRVIIICAR 368
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 723 TKPFGRLWWDEIVNTVVT-RAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKE 781
T +GR+ +++ T+ T +P N +HP +RV+++RE AR Q F D Y +G KE
Sbjct: 113 TTLYGRIDYNKPSYTITTCFNRPGNGTYVHPIHNRVISVREAARFQTFQDDYYFYGNKKE 172
>gi|320031459|gb|EFW13422.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 1040
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 11/154 (7%)
Query: 415 EPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDI 474
E +K + +G S+++ G V+FI G PCQG S N + + +L
Sbjct: 578 EDVKLFRGSVDDFLAVAIRGQGSDLVAKLGQVEFISAGSPCQGYSLANSRKGNKVSL--- 634
Query: 475 KNRQLLVFMDV-IEYLKPKYVLMENVVDILKFSGGFLARYAVGRL----VSMDYQTRLGI 529
+N ++ + +++ +P+Y ++ENV + + R + +L V + YQ RL
Sbjct: 635 RNSSMIASVAAYVDFYRPQYAILENVPAMASKTH---ERNPLSQLICAFVGLGYQLRLMH 691
Query: 530 MAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
+ A SYG PQ R R+FL A P +LP++P TH
Sbjct: 692 LDAWSYGAPQSRSRLFLLIAAPGLQLPEHPALTH 725
>gi|443326789|ref|ZP_21055431.1| DNA-methyltransferase Dcm [Xenococcus sp. PCC 7305]
gi|442793582|gb|ELS03027.1| DNA-methyltransferase Dcm [Xenococcus sp. PCC 7305]
Length = 422
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 64/143 (44%), Gaps = 14/143 (9%)
Query: 423 CKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
C+E L KG+++ D+D I GGPPCQG S LED +N+ + +
Sbjct: 61 CEELLAAIQNKGFKT-------DIDVITGGPPCQGYSYMG-----DRILEDPRNQLIFEY 108
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTR--LGIMAAGSYGLPQF 540
+I ++PKY + ENV I + +Y + I+ + YG PQ
Sbjct: 109 ARIISTIRPKYFIFENVPGIASGKHRQFLTELIKNFNQNNYSIVEPIQILDSSLYGAPQK 168
Query: 541 RLRVFLWGARPFKKLPQYPLPTH 563
R R+ L G R P YP PTH
Sbjct: 169 RKRLILIGYRNDMPKPNYPQPTH 191
>gi|218245850|ref|YP_002371221.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|257058898|ref|YP_003136786.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
gi|218166328|gb|ACK65065.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|256589064|gb|ACU99950.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
Length = 418
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D + GGPPCQG S + LED +N + F+ ++ L+PKY ++ENV +
Sbjct: 76 IDVVFGGPPCQGFSLMGK-----RVLEDERNALIAHFIRLVLELQPKYFVLENVPGMAIG 130
Query: 506 SGGFLARYAVGRLVSMDYQ--TRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
S L + + Y+ T I+ A +YG+PQ R R+FL G + LP YP
Sbjct: 131 SHQQLLQEIFDKFSYHGYEVETNYQILNAANYGVPQNRERLFLLGCQKGLILPNYP---- 186
Query: 564 EIVARGVIPNEFQEIIVAYAN----NQPCQLEKGVLLSDAISDLPLVTN 608
Q I + N N L K + +AI DLP V N
Sbjct: 187 ------------QAISYNFTNKSEPNNQLNLPKCPTVWEAIKDLPEVEN 223
>gi|448504090|ref|ZP_21613717.1| DNA-cytosine methyltransferase [Halorubrum coriense DSM 10284]
gi|445691180|gb|ELZ43372.1| DNA-cytosine methyltransferase [Halorubrum coriense DSM 10284]
Length = 403
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 118/338 (34%), Gaps = 91/338 (26%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VD + GGPPCQ GF+ +P + D +N + F+ + L PK L ENV +
Sbjct: 76 VDLVAGGPPCQ---GFSEVVSPDGS--DDRNHLFVNFISWVNELDPKAALFENVRGMQNT 130
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR------PFKKLPQYP 559
+GG M Y ++ A +G+PQ R R+ + + PF P
Sbjct: 131 AGGKFLDAVEESFGEMGYDVSYRVVEASDFGVPQQRHRLLVLATKRSTTEFPFDGFELDP 190
Query: 560 LPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGT 619
+ T ++A I DLP V+ E + E Y
Sbjct: 191 IETPGVIA-------------------------------GIGDLPEVSPGEEKTE--YDA 217
Query: 620 VARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFR 679
T Q + R D L+ Q A+ D E + I G N
Sbjct: 218 EPATVIQDDL---RGDNTELTHHQAANH------------TEDMVEMISHI--SDGGNRT 260
Query: 680 DLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVV 739
++P + + SG Y + S +P V
Sbjct: 261 EIP----------------DELQPSSG------YHNSYSRLDSQEP--------AVAITS 290
Query: 740 TRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
++P + +HP Q R LT RE ARLQ FPD Y+ G
Sbjct: 291 NMSKPSSARCIHPFQHRGLTPREGARLQTFPDWYRFDG 328
>gi|453067043|ref|ZP_21970333.1| modification methylase [Rhodococcus qingshengii BKS 20-40]
gi|452767430|gb|EME25670.1| modification methylase [Rhodococcus qingshengii BKS 20-40]
Length = 431
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 16/156 (10%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
++D + GGPPCQG S R +D +N +++ + ++PK V+MENV +L
Sbjct: 158 NIDVLAGGPPCQGFSLAGRRDR-----DDPRNHLFRNLLELADLVRPKVVVMENVRLLLS 212
Query: 505 FS---GGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP--QYP 559
GG + +G + + Y + + A YG+PQFR RVF+ R + ++P
Sbjct: 213 MKDPDGGMVVDRILGEMAACGYDASVNTVNAQDYGVPQFRERVFIVATRRDSGIGPLRFP 272
Query: 560 LPTHEIVARGVIP-NEFQEIIVAYA---NNQPCQLE 591
TH + GV P F++ V A + Q C+ +
Sbjct: 273 PKTHGV--NGVAPLRTFRDATVDLAPLESGQACETD 306
Score = 42.4 bits (98), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 712 DYAMKFEHQSSTKPFGRLWWDEIVNTV-VTRAQPHNRILLHPSQDRVLTIRENARLQGFP 770
D AM+ +T + RL WDE +TV T +HP R LT+RE ARLQ FP
Sbjct: 336 DPAMRPSSGYNTT-YKRLRWDEPASTVGTTFGMISASRNVHPKHTRSLTVREAARLQTFP 394
Query: 771 DCYQLFG 777
D Y G
Sbjct: 395 DDYVFEG 401
>gi|269797252|ref|YP_003311152.1| DNA-cytosine methyltransferase [Veillonella parvula DSM 2008]
gi|269093881|gb|ACZ23872.1| DNA-cytosine methyltransferase [Veillonella parvula DSM 2008]
Length = 423
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 128/338 (37%), Gaps = 76/338 (22%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
++D I GGPPCQ S R N + D + ++D KPK+ + ENV +L
Sbjct: 108 ELDGIIGGPPCQAYSIIGRANNKKKKDTDKRIYLYKHYLDFCNRYKPKFFIFENVKGLLS 167
Query: 505 F---SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLP 561
F SG L + S Y ++ A +G+ Q R RV + G R K L
Sbjct: 168 FKDISGDLLLDKMIQEFDSAGYAVNYEVINANDFGVSQNRERVIIVGHR--KDL------ 219
Query: 562 THEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVA 621
+ F + + Y P L + +DLP + +S + V+
Sbjct: 220 --------LFNKSFFDYLYNYVEPSP-------KLKELFADLPNIRAGKSSKKYCCNYVS 264
Query: 622 RTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDH--RPFQVNNDDYERVCCIPKRKGANFR 679
+ QKYIR S +L H RP N+ ++ K+ G N R
Sbjct: 265 KY-VQKYIR---------------SNDDILTQHIARPHSKNDLRIYKLVLKAKKIGENLR 308
Query: 680 --DLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNT 737
D+P L N + ++R + L +D + +T
Sbjct: 309 YNDIPVELQTHSNTTSF---LDR-------------------------YKALDYDSVSHT 340
Query: 738 VVTRAQPHNRILLHPS--QDRVLTIRENARLQGFPDCY 773
VV +HP Q+R +++RE AR+QGFPD +
Sbjct: 341 VVAHISKDGHYYIHPDLRQNRSISVREAARIQGFPDNF 378
>gi|16331413|ref|NP_442141.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803]
gi|383323154|ref|YP_005384007.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383326323|ref|YP_005387176.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383492207|ref|YP_005409883.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384437475|ref|YP_005652199.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803]
gi|451815566|ref|YP_007452018.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803]
gi|1001584|dbj|BAA10211.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803]
gi|339274507|dbj|BAK50994.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803]
gi|359272473|dbj|BAL29992.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275643|dbj|BAL33161.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278813|dbj|BAL36330.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407961204|dbj|BAM54444.1| cytosine-specific methyltransferase [Bacillus subtilis BEST7613]
gi|451781535|gb|AGF52504.1| cytosine-specific methyltransferase [Synechocystis sp. PCC 6803]
Length = 424
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 141/365 (38%), Gaps = 64/365 (17%)
Query: 419 GLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQ 478
L E L++ KGY S D+D I GGPPCQG S + + L+D +N
Sbjct: 56 ALVSAGEILRKLNNKGYSS-------DIDLIAGGPPCQGFSLMGKRQ-----LDDPRNSL 103
Query: 479 LLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTR--LGIMAAGSYG 536
+ ++ +I LKPKY L ENV + V ++ Y + ++ A YG
Sbjct: 104 VFEYVRMIRDLKPKYFLFENVPGMRSGQHKKFLEELVREFETIGYHIEKPILVLDASLYG 163
Query: 537 LPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLL 596
PQ R R+ + G+R K YPLP + VA N ++ + A P G +
Sbjct: 164 APQKRKRLIILGSRKDVKPVTYPLPLYFDVAELKQSNCSEKSVSNIAYKPP--FTCGEAI 221
Query: 597 SDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRP 656
D + P ED+ +E Y LR+ ++ + A SL +
Sbjct: 222 DDLVDHTPYAVG---EDQG-----IPSELLDYSALRKSYAIHANGAF-----SLCHKR-- 266
Query: 657 FQVNNDDYERVCCIPKRKGAN-FRD-LPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYA 714
QVNN Y + K F D +PG + +R + L++G
Sbjct: 267 -QVNNLVYGHIGSQHTEKSMKRFADTVPGTVERTSRFLRLSKTGLCNTLRAG-------- 317
Query: 715 MKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQ 774
+S K T +P +H + R +T+RE ARL +PD +Q
Sbjct: 318 -----TASDK------------GAYTAPRP-----IHYALPRCITVREAARLHTYPDWFQ 355
Query: 775 LFGPV 779
+
Sbjct: 356 FHNTI 360
>gi|383480314|ref|YP_005389208.1| cytosine-specific methyltransferase [Streptococcus pyogenes
MGAS15252]
gi|383494296|ref|YP_005411972.1| cytosine-specific methyltransferase [Streptococcus pyogenes
MGAS1882]
gi|378928304|gb|AFC66510.1| cytosine-specific methyltransferase [Streptococcus pyogenes
MGAS15252]
gi|378930023|gb|AFC68440.1| cytosine-specific methyltransferase [Streptococcus pyogenes
MGAS1882]
Length = 395
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 149/352 (42%), Gaps = 72/352 (20%)
Query: 435 YRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYV 494
+++ ++ L G VD + GGPPCQG S + N DI+N+ + ++++++ + P+ +
Sbjct: 69 HKNELVQLKGKVDLVVGGPPCQGFSIAGKREN-----NDIRNQLMHSYIELVKLVDPQML 123
Query: 495 LMENVVDI-LKF-SGGFLARYA---VGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGA 549
ENV + F G Y+ L + Y+ I+ +G+PQ R R L+ +
Sbjct: 124 FFENVQGFTIDFRENGKRKNYSAILAEDLKKLGYKINSQIVTMSEFGIPQNRKRFILFAS 183
Query: 550 RPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNN 609
+ ++ ++ + N I A+ +N+ L V +S AI DL
Sbjct: 184 KNREE--------SQLFFERLYTN-----IDAFLDNR--NLASKVTISAAIGDLIRSKGF 228
Query: 610 -ESEDERKY--GTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYER 666
ES D + + G E Y RL R ++ S + HR F ++D +
Sbjct: 229 VESPDTKNFHNGLYGDAE-SAYQRLMRQNI--------PSNNKVPDSHR-FANHSDATIK 278
Query: 667 VCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPF 726
+ F++L V D +R P M V + + P
Sbjct: 279 L----------FKELMKV---SDKAIRITPKMNVVEGLKKRGITP--------------- 310
Query: 727 GRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGP 778
L D I NT+ + + +H ++ R++T+RE+AR+Q FPD Y+ GP
Sbjct: 311 --LKADSICNTITSIPDDY----VHYAEPRIMTVREHARIQSFPDDYEFKGP 356
>gi|313667096|gb|ADR72993.1| M1.BspMI [Bacillus sp. M(2010)]
Length = 348
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 7/111 (6%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALE-----DIKNRQLLVFMDVIEYLKPKYVLMENV 499
+VD + GGPPCQG S + + LE D +N + ++ +++ LKPKY++MENV
Sbjct: 70 EVDVLIGGPPCQGFSTIGK--RVSSNLEKRSSPDPRNGLIFQYIRLLKDLKPKYLVMENV 127
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR 550
+L +GG A+ + + Y ++ YG+PQ R RV + G R
Sbjct: 128 KGLLTMNGGGDLANAINLIQELGYNVAYKVLNMADYGVPQIRERVIIIGNR 178
>gi|387832218|ref|YP_003352155.1| cytosine specific DNA methyltransferase [Escherichia coli SE15]
gi|422357827|ref|ZP_16438492.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 110-3]
gi|422840183|ref|ZP_16888154.1| hypothetical protein ESPG_02840 [Escherichia coli H397]
gi|432498116|ref|ZP_19739900.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE216]
gi|432586158|ref|ZP_19822534.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE58]
gi|432689610|ref|ZP_19924867.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE161]
gi|432697197|ref|ZP_19932382.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE162]
gi|432757346|ref|ZP_19991884.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE22]
gi|432776716|ref|ZP_20010976.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE59]
gi|432790417|ref|ZP_20024540.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE65]
gi|432819183|ref|ZP_20052900.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE118]
gi|432825311|ref|ZP_20058971.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE123]
gi|432916554|ref|ZP_20121478.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE173]
gi|432923880|ref|ZP_20126387.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE175]
gi|432979201|ref|ZP_20167994.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE211]
gi|433099167|ref|ZP_20285322.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE139]
gi|433108638|ref|ZP_20294583.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE148]
gi|281181375|dbj|BAI57705.1| cytosine specific DNA methyltransferase [Escherichia coli SE15]
gi|315288374|gb|EFU47772.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 110-3]
gi|371607392|gb|EHN95966.1| hypothetical protein ESPG_02840 [Escherichia coli H397]
gi|431034220|gb|ELD46165.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE216]
gi|431124980|gb|ELE27424.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE58]
gi|431229021|gb|ELF25674.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE162]
gi|431233016|gb|ELF28616.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE161]
gi|431298084|gb|ELF87719.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE22]
gi|431332604|gb|ELG19826.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE59]
gi|431334264|gb|ELG21435.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE65]
gi|431371968|gb|ELG57672.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE118]
gi|431376502|gb|ELG61824.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE123]
gi|431449896|gb|ELH30462.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE173]
gi|431451112|gb|ELH31589.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE175]
gi|431499735|gb|ELH78753.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE211]
gi|431610682|gb|ELI79968.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE139]
gi|431621734|gb|ELI90525.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE148]
Length = 398
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 8/110 (7%)
Query: 444 GDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
G++D I GGPPCQG F+ R A ++D +N+ LL + D + KPK L+ENV +L
Sbjct: 75 GELDMILGGPPCQG---FSSHRINDAGVDDPRNKLLLRYFDFVCEFKPKAFLVENVSGLL 131
Query: 504 -KFSGGFLARYAVGRLVSMDYQTRLG--IMAAGSYGLPQFRLRVFLWGAR 550
K L R+ L S + T + ++ A YG+PQ R RVF+ G R
Sbjct: 132 WKRHEAHLKRFKF--LASKNGYTLIHCDVLNARDYGVPQNRKRVFIAGVR 179
>gi|428312828|ref|YP_007123805.1| DNA-methyltransferase Dcm [Microcoleus sp. PCC 7113]
gi|428254440|gb|AFZ20399.1| DNA-methyltransferase Dcm [Microcoleus sp. PCC 7113]
Length = 666
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VDFI GGPPCQ S R + A D + ++ +++ L+PK L ENV I
Sbjct: 124 VDFIIGGPPCQTFSAAGRRASGVAGTSDARGTLFQEYVRILKTLQPKGFLFENVYGITGA 183
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
G + Y ++ A YG+PQ R R+F+ G R + Q+P PTH
Sbjct: 184 QNGEAWKEIQAAFQEAGYTIHFRVLDAADYGVPQHRERLFIVGLR--EGSYQFPYPTH 239
>gi|159899163|ref|YP_001545410.1| C-5 cytosine-specific DNA methylase [Herpetosiphon aurantiacus DSM
785]
gi|159892202|gb|ABX05282.1| C-5 cytosine-specific DNA methylase [Herpetosiphon aurantiacus DSM
785]
Length = 362
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+D GGPPCQ S + Q L D + + F+ + L P Y L+ENV +
Sbjct: 216 LDLSYGGPPCQSFSQAGK----QKGLSDPRGNLIYEFIRFLSDLNPNYFLLENVKGLQGI 271
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
+ G L + + + Y G++ A YG PQ R R+ + G + PLPTH
Sbjct: 272 NNGQLLHLIIDDIRKLGYNVTFGVVNAADYGTPQLRKRIIILGCKQDLGFVNLPLPTH 329
>gi|423314738|ref|ZP_17292671.1| DNA (cytosine-5-)-methyltransferase [Bacteroides vulgatus
CL09T03C04]
gi|392681485|gb|EIY74843.1| DNA (cytosine-5-)-methyltransferase [Bacteroides vulgatus
CL09T03C04]
Length = 388
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 24/173 (13%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VD I GGPPCQG S + +R+P D +N+ F+D++ LKPK+ +MENV IL
Sbjct: 210 VDVILGGPPCQGFS-YAGWRDPN----DQRNQLFRDFVDIVTTLKPKFFVMENVPGILTM 264
Query: 506 SGGFLARYAVGRLVSMDYQTRLGI-MAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHE 564
G + + Y + + A YG+PQ R RV L G ++ Q P P
Sbjct: 265 RKGEAIKEIIQAFADAGYHVGTPLKLTAADYGVPQKRKRVILIGCSENIEIYQ-PEPLFT 323
Query: 565 IVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKY 617
G+ P L + + + +AI P + + +DE ++
Sbjct: 324 DKPNGLFP-----------------LPQYITVREAIGSFPAIPDGGGDDEMEF 359
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 30/131 (22%)
Query: 650 LLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL 709
+LY+H +++ + + IP+ G N++D+P + DN++
Sbjct: 2 ILYNHIAYKMCQHEMDMAQHIPE--GGNWKDIPEKIT--DNRL----------------- 40
Query: 710 VPDYAMKFEHQSSTKPFGRLWWDE---IVNTVVTRAQPHNRILLHPSQDRVLTIRENARL 766
A + T +GRL WD+ +NT R N LHP Q RV++ RE AR
Sbjct: 41 ----ANIRDSGGRTTYYGRLRWDKPSYTINTFFNRVP--NGCNLHPEQMRVMSTREAARF 94
Query: 767 QGFPDCYQLFG 777
Q FPD + G
Sbjct: 95 QSFPDDFIFVG 105
>gi|426411086|ref|YP_007031185.1| cytosine-specific methyltransferase [Pseudomonas sp. UW4]
gi|426269303|gb|AFY21380.1| cytosine-specific methyltransferase [Pseudomonas sp. UW4]
Length = 424
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 25/148 (16%)
Query: 413 TWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALE 472
+W PI+ +S C+ L+ Y+S++L L G +D + GGPPCQG S R RNP E
Sbjct: 54 SWLPIEAMS-CEAFLEN-----YKSHLLKLAGTIDLMVGGPPCQGFSTAGR-RNP----E 102
Query: 473 DIKNRQLLVFMDVIEYLKPKYVLMENVVDI----------LKFSGGFL----ARYAVGRL 518
D +N+ ++++++ ++P ++++ENV + G ++ A + L
Sbjct: 103 DPRNKMAEQYLELVKIIRPNFIVIENVSGFNSRFTRKNSDAEVDGKYITQSYADFICESL 162
Query: 519 VSMDYQTRLGIMAAGSYGLPQFRLRVFL 546
S+ Y G + +G+PQ R R +
Sbjct: 163 SSLGYAVSRGKINCADFGVPQNRHRYLI 190
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Query: 737 TVVTRAQPHNRI------LLHPSQDRVLTIRENARLQGFPDCYQLFG 777
TV+T +P I ++H S++R+LT RE+AR+Q FPD ++ G
Sbjct: 321 TVLTSGEPSPTITTLPDDIIHYSENRILTARESARIQSFPDWFEFTG 367
>gi|220903552|ref|YP_002478864.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219867851|gb|ACL48186.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 310
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 11/122 (9%)
Query: 447 DFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFS 506
+ + GG PCQG S N R+ D +N + F+ ++ L+P+Y L ENV IL
Sbjct: 63 EVVVGGFPCQGFSQANLLRSGN----DERNSLYIEFLRIVSSLQPRYFLAENVRGILSLE 118
Query: 507 GGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP-----QYPLP 561
GG + +G + Y+ + + +G+PQ R RV + G R K +P +YP
Sbjct: 119 GGSAIKKILGDFNNAGYRLKYKLFNVADFGVPQSRFRVIIAGTR--KDIPKRLDYEYPAA 176
Query: 562 TH 563
TH
Sbjct: 177 TH 178
>gi|108805045|ref|YP_644982.1| DNA (cytosine-5-)-methyltransferase [Rubrobacter xylanophilus DSM
9941]
gi|108766288|gb|ABG05170.1| DNA (cytosine-5-)-methyltransferase [Rubrobacter xylanophilus DSM
9941]
Length = 405
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 80/187 (42%), Gaps = 27/187 (14%)
Query: 448 FICGGPPCQGVS--GFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
F+ GGPPCQG S G RF + D +N + V+E L+P + ENV +L
Sbjct: 226 FVLGGPPCQGFSTAGNRRF------VGDERNWLFRQYKAVLERLQPDGFVFENVPGLLNM 279
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEI 565
GG + R L S Q + + A YG+PQ R RV L G
Sbjct: 280 EGGSVFRAIRDELASTTKQLVVWRLRAEEYGVPQRRTRVILVGD---------------- 323
Query: 566 VARGVIPNEFQEIIVAYANNQPC--QLEKGVLLSDAISDLPLVTNNESEDERKYGTVART 623
+ G + +E + + NN +L V + DA+SDLP + E + Y
Sbjct: 324 -SSGDVESEPPKTVTQLGNNMSLFNELPAAVSVRDALSDLPALRPGEDGSHKDYTHDPEH 382
Query: 624 EFQKYIR 630
+Q+++R
Sbjct: 383 PYQEFVR 389
>gi|194698662|gb|ACF83415.1| unknown [Zea mays]
Length = 163
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 69/141 (48%), Gaps = 25/141 (17%)
Query: 650 LLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKP- 708
+L DH ++N + R IPKR G ++ DLP E+V L +G+
Sbjct: 3 VLNDHISKEMNELNLIRCQHIPKRPGCDWHDLPD---------------EKVKLSNGQMA 47
Query: 709 -----LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIR 761
+P+ A + H +GRL W+ T VT QP ++ HP QDR++T+R
Sbjct: 48 DLIPWCLPNTAKR--HNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPDQDRIITVR 105
Query: 762 ENARLQGFPDCYQLFGPVKER 782
E AR QGFPD Y+ G ++ +
Sbjct: 106 ECARSQGFPDSYEFAGNIQNK 126
>gi|434405034|ref|YP_007147919.1| DNA-methyltransferase Dcm [Cylindrospermum stagnale PCC 7417]
gi|428259289|gb|AFZ25239.1| DNA-methyltransferase Dcm [Cylindrospermum stagnale PCC 7417]
Length = 466
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 21/166 (12%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
++D + GGPPCQG S + RN L+D +N + ++ ++ L+PK+V++ENV +
Sbjct: 107 EIDVVFGGPPCQGFSLIGK-RN----LDDPRNGLVDHYIRLVLELQPKFVVLENVKGMTV 161
Query: 505 FSGGFLARYAVGRLVSMDYQT--RLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
+ + YQ I+ A YG+PQ R R+FL R +LP YPLPT
Sbjct: 162 GKHQEFILEIIYKFEENGYQVLKNYKILNAAEYGVPQNRERLFLLACRQDLELPNYPLPT 221
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTN 608
+ + +A +NN P +S A LP++ N
Sbjct: 222 SKPAKKK----------IAKSNNLPLS----PTVSKAFQGLPVIEN 253
>gi|209809294|ref|YP_002264832.1| putative C-5 cytosine-specific DNA methylase [Aliivibrio
salmonicida LFI1238]
gi|208010856|emb|CAQ81257.1| putative C-5 cytosine-specific DNA methylase [Aliivibrio
salmonicida LFI1238]
Length = 387
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Query: 434 GYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKY 493
G R ++ G++D I GGPPCQ GF+ R A + D +N LL + + + +PK
Sbjct: 66 GLRESLNLKAGELDLILGGPPCQ---GFSTHRINNAGVNDPRNALLLRYFEFVHEFQPKA 122
Query: 494 VLMENVVDIL-KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR 550
L+ENV +L K FL ++ T GI+ A +G+PQ R RVF+ G R
Sbjct: 123 FLVENVAGLLWKRHEDFLNKFLQLAAKEGYEITFCGILNAKDFGVPQNRKRVFIHGVR 180
>gi|389576210|ref|ZP_10166238.1| DNA-methyltransferase Dcm [Eubacterium cellulosolvens 6]
gi|389311695|gb|EIM56628.1| DNA-methyltransferase Dcm [Eubacterium cellulosolvens 6]
Length = 427
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 133/339 (39%), Gaps = 68/339 (20%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAAL---EDIKNRQLLVFMDVIEYLKPKYVLMENVVDI 502
VD I GGPPCQ S R ++ + ED +N ++ ++ +P+ + ENV+ I
Sbjct: 119 VDVIIGGPPCQAYSLVGRAQSSHMKVPMNEDPRNDLYKLYARFLKKYQPEMFVFENVMGI 178
Query: 503 LKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPT 562
+GG + +L + Y+ A ++G+ Q R R+ + G +KK Y P
Sbjct: 179 ESANGGETWKKIKAQLKRVGYEIEPQERNARTFGVLQNRRRMIIVG---WKKGTNYSYP- 234
Query: 563 HEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVAR 622
EFQ+ ++ D ++DLP + +D +Y +
Sbjct: 235 -----------EFQDKT------------SDAIVEDLLNDLPKLVPGAGKDVSEYRSGEY 271
Query: 623 TEFQKYIRLRR-HDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDL 681
+++ K ++LR DV+ L A+ + R + +D K N+ L
Sbjct: 272 SDYLKTMKLRSDDDVLTLHKARPNKDRDIEIYKRAIEAWDDG--------KGSRLNYNSL 323
Query: 682 PGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTR 741
P L N+ + ++R + GK D +T++
Sbjct: 324 PEELKTHKNRHSF---VDRFKVVEGK------------------------DHYCHTMLAH 356
Query: 742 AQPHNRILLHP--SQDRVLTIRENARLQGFPDCYQLFGP 778
+HP Q R +T+RE AR+Q FPD Y GP
Sbjct: 357 ISKDGHYFIHPDIKQHRSITVREAARIQSFPDNYFFEGP 395
>gi|75906326|ref|YP_320622.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC
29413]
gi|75700051|gb|ABA19727.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC
29413]
Length = 431
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
D+D I G PCQG S + +D +N + F ++ L+PK+ +MENV I
Sbjct: 86 DIDVIICGSPCQGFSLMGK-----RIFDDPRNSLVFHFHRLVLELQPKFFVMENVRGITL 140
Query: 505 FSGGFLARYAVGRLVSMDYQTR--LGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLP 561
+ + + S YQ ++ A YG+PQ R R+FL GAR KLP+YP P
Sbjct: 141 GEHKQILQALIHEFKSHGYQVEENYQVLNAAHYGVPQARERLFLIGAREDVKLPKYPKP 199
>gi|427720675|ref|YP_007068669.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 7507]
gi|427353111|gb|AFY35835.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 7507]
Length = 657
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VDF+ GGPPCQ S R D + ++ +++ L+PK L ENV I
Sbjct: 122 VDFVIGGPPCQTFSAAGRRAAGVLGTTDARGTLFQEYVRILKILQPKGFLFENVYGITGA 181
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
+GG + + Y+ I+ A YG+PQ R R+F+ G + + L +P PTH
Sbjct: 182 NGGEAWQEIQAAFQEVGYKIYFRILDAADYGVPQHRERLFIVGLKEGEYL--FPYPTH 237
>gi|24527986|emb|CAD33713.1| putative DNA methylase [Escherichia coli]
Length = 310
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 17/149 (11%)
Query: 424 KEKLKEFVTKGYRSNI----LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQL 479
K + E + G +NI +P + D + GG PCQG S N R ED +N+
Sbjct: 39 KRNIGEHIVLGDIANINSSDIP---NCDVVVGGFPCQGFSVANMNRKS----EDPRNKLY 91
Query: 480 LVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQ 539
L + +I +P Y + ENV IL G + + S+ Y + ++ YG+PQ
Sbjct: 92 LEMVRIIRDKRPAYFIAENVKGILSLDKGLVIQKITSDFESLGYNVKYSLLNCADYGVPQ 151
Query: 540 FRLRVFLWGARPFKKLP---QYPLP-THE 564
R+RV + G R K LP +P P THE
Sbjct: 152 TRMRVIILGVR--KDLPDIENFPPPKTHE 178
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,843,036,841
Number of Sequences: 23463169
Number of extensions: 580770738
Number of successful extensions: 4482852
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1878
Number of HSP's successfully gapped in prelim test: 3468
Number of HSP's that attempted gapping in prelim test: 4448691
Number of HSP's gapped (non-prelim): 27548
length of query: 782
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 631
effective length of database: 8,816,256,848
effective search space: 5563058071088
effective search space used: 5563058071088
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 81 (35.8 bits)