BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003974
(782 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9AXT8|CMT1_MAIZE DNA (cytosine-5)-methyltransferase 1 OS=Zea mays GN=MET2A PE=1 SV=1
Length = 912
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/728 (56%), Positives = 517/728 (71%), Gaps = 36/728 (4%)
Query: 72 FVSPPVSADEALKRYPDRYKALN-----EEEEVLQARCHYTQASVDGCLYNLGDDAYVKA 126
F+ PV+ADEA +P RY +EEE L+ARCHY A VD +Y LGDD YVKA
Sbjct: 137 FIGSPVAADEARSNWPKRYGRSTAAKKPDEEEELKARCHYRSAKVDNVVYCLGDDVYVKA 196
Query: 127 EEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACLV------DRKRVFLSDV 180
E DYI RI E FE D YF RWF+RAEDTVI L + D +RVFLS+
Sbjct: 197 GENEADYIGRITEFFEGTDQCHYFTCRWFFRAEDTVINSLVSISVDGHKHDPRRVFLSEE 256
Query: 181 EDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTLPHLTFLNINNESNRRD 240
++DN L+CI+SK KI V NMD +AK + I CDLYYDM Y++ + TF NI++E+ +
Sbjct: 257 KNDNVLDCIISKVKIVHVDPNMDPKAKAQLIESCDLYYDMSYSVAYSTFANISSENGQSG 316
Query: 241 SDASSTISS-----ETGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAI 295
SD +S ISS ET S+ P +LLDLYSGCG MSTGLC+GA+LSG+KL TRWA+
Sbjct: 317 SDTASGISSDDVDLETSSSMPTRT--ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAV 374
Query: 296 DINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPEQSLNFMSEE 355
D N AC+SLK+NHP+T+VRNE AD+FL+LLKEWA LC+ + + D D N S E
Sbjct: 375 DFNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCKKY-VQDVDS------NLASSE 427
Query: 356 EEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWE 415
++ D+D+ + +EF VE+L+ +CYG ++ G+YFKV+W+GYGP EDTWE
Sbjct: 428 DQA--------DEDSPLDKDEFVVEKLVGICYGGSDREN--GIYFKVQWEGYGPEEDTWE 477
Query: 416 PIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIK 475
PI LS C +K++EFV +G++ ILPLPGDVD ICGGPPCQG+SGFNR+RN L+D K
Sbjct: 478 PIDNLSDCPQKIREFVQEGHKRKILPLPGDVDVICGGPPCQGISGFNRYRNRDEPLKDEK 537
Query: 476 NRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSY 535
N+Q++ FMD++ YLKPKYVLMENVVDILKF+ G+L +YA+ LV+M YQ RLG+M AG Y
Sbjct: 538 NKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAGCY 597
Query: 536 GLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVL 595
GLPQFR+RVFLWGA LP+YPLPT+++V RG PN F + +VAY Q L+K +L
Sbjct: 598 GLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMVAYDETQKPSLKKALL 657
Query: 596 LSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMAS-RPSLLYDH 654
L DAISDLP V N++ D +YG +TEFQ+YIRL R D+++ S + A L DH
Sbjct: 658 LGDAISDLPKVQNHQPNDVMEYGGSPKTEFQRYIRLSRKDMLDWSFGEGAGPDEGKLLDH 717
Query: 655 RPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYA 714
+P ++NNDDYERV IP +KGANFRDL GV VG +N V WDP +ERV L SGKPLVPDYA
Sbjct: 718 QPLRLNNDDYERVQQIPVKKGANFRDLKGVRVGANNIVEWDPEIERVKLSSGKPLVPDYA 777
Query: 715 MKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQ 774
M F S KPFGRLWWDE V TVVTRA+PHN++++HP+Q RVLTIRENARLQGFPD Y+
Sbjct: 778 MSFIKGKSLKPFGRLWWDETVPTVVTRAEPHNQVIIHPTQARVLTIRENARLQGFPDYYR 837
Query: 775 LFGPVKER 782
LFGP+KE+
Sbjct: 838 LFGPIKEK 845
>sp|Q8LPU5|CMT3_MAIZE DNA (cytosine-5)-methyltransferase 3 OS=Zea mays GN=DMT105 PE=2
SV=1
Length = 915
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/744 (55%), Positives = 519/744 (69%), Gaps = 36/744 (4%)
Query: 56 RVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRYK---ALN--EEEEVLQARCHYTQAS 110
RV +++ D F+ PV+A EA +P RY+ A N EE++ L+ARCHY A
Sbjct: 125 RVGRRSAAASGDHVPEFIGSPVAAAEAHSNWPKRYERSTAANKPEEDDELKARCHYRSAK 184
Query: 111 VDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACL- 169
VD +Y LGDD YVKA E DYI RI E FE D YF RWF+RAEDTVI L +
Sbjct: 185 VDNIVYCLGDDVYVKAGENEADYIGRITEFFEGTDRCHYFTCRWFFRAEDTVINSLVSIN 244
Query: 170 -----VDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTL 224
D +RVFLS+ ++DN L+CI+SK KI V NMD +AK + I CDLYYDM Y++
Sbjct: 245 VDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKAQLIEHCDLYYDMSYSV 304
Query: 225 PHLTFLNINNESNRRDSDASSTISS-----ETGSNSPIGQPEMSLLDLYSGCGAMSTGLC 279
+ TF NI++E+ + S+ +S ISS ET SN P + +LLDLYSGCG MSTGLC
Sbjct: 305 AYSTFANISSENGQSGSETASGISSDDAGLETSSNMP--ERTATLLDLYSGCGGMSTGLC 362
Query: 280 IGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIY 339
+GA+LSG+KL TRWA+D+N AC+SLK+NHP+T+VRNE AD+FL+LLKEWA LC+ +
Sbjct: 363 LGAALSGLKLETRWAVDLNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCEKYVHQ 422
Query: 340 DTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVY 399
D D N E++E+ + + +EF V++LI + Y + K GVY
Sbjct: 423 DVDS------NLAGSEDQEDAD---------TLDKDEFVVQKLIGIRYDGTGRKK--GVY 465
Query: 400 FKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVS 459
FKV+W+GYGP EDTWEPI LS C K++EFV +G + ILPLPGDVD ICGGPPCQG+S
Sbjct: 466 FKVQWEGYGPEEDTWEPIDNLSDCPLKIREFVQEGRKRKILPLPGDVDVICGGPPCQGIS 525
Query: 460 GFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLV 519
GFNRFRN L+D KN+Q++ FMD++ YLKPKYVLMENVVDILKF+ G+L +YA+ LV
Sbjct: 526 GFNRFRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLV 585
Query: 520 SMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEII 579
+M YQ RLG+M AG YGLPQFR+RVFLWGA LP+YPLPT+++V RG PN F + +
Sbjct: 586 AMKYQARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCM 645
Query: 580 VAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNL 639
VAY Q L+K +LL DA SDLP V N++ D +YG +TEFQ+YIRL R D+++
Sbjct: 646 VAYDETQRPSLKKALLLGDAFSDLPKVENHQPNDVMEYGGSPKTEFQRYIRLGRKDMLDW 705
Query: 640 SSAQMAS-RPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSM 698
S + A L DH+P ++NNDDYERV IP +KGANFRDL GV VG +N V WDP +
Sbjct: 706 SFGEEAGPDEGKLLDHQPLRLNNDDYERVKQIPVKKGANFRDLKGVKVGANNVVEWDPEV 765
Query: 699 ERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVL 758
ERV L SGKPLVPDYAM F S KPFGRLWWDE V TVVTRA+PHN+++LHP+Q RVL
Sbjct: 766 ERVYLSSGKPLVPDYAMSFIKGKSLKPFGRLWWDETVPTVVTRAEPHNQVILHPTQARVL 825
Query: 759 TIRENARLQGFPDCYQLFGPVKER 782
TIRENARLQGFPD Y+LFGP+KE+
Sbjct: 826 TIRENARLQGFPDYYRLFGPIKEK 849
>sp|Q9ARI6|CMT2_MAIZE DNA (cytosine-5)-methyltransferase 2 OS=Zea mays GN=ZMET5 PE=2 SV=1
Length = 915
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/744 (55%), Positives = 517/744 (69%), Gaps = 36/744 (4%)
Query: 56 RVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRYK---ALN--EEEEVLQARCHYTQAS 110
RV +++ D F+ PV A EA +P RY+ A N EE++ L+ARCHY A
Sbjct: 125 RVGRRSAAASGDHVPEFIGSPVGAAEAHSNWPKRYERSTAANKPEEDDELKARCHYRSAK 184
Query: 111 VDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAEDTVIKDLACL- 169
VD +Y LGDD YVKA E DYI RI E FE D YF RWF+RAEDTVI L +
Sbjct: 185 VDNIVYCLGDDVYVKAGENEADYIGRITEFFEGTDRCHYFTCRWFFRAEDTVINSLVSIN 244
Query: 170 -----VDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDMKYTL 224
D +RVFLS+ ++DN L+CI+SK KI V NMD +AK + I CDLYYDM Y++
Sbjct: 245 VDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKAQLIEHCDLYYDMSYSV 304
Query: 225 PHLTFLNINNESNRRDSDASSTISS-----ETGSNSPIGQPEMSLLDLYSGCGAMSTGLC 279
+ TF NI++E+ + S+ +S ISS ET SN P + +LLDLYSGCG MSTGLC
Sbjct: 305 AYSTFANISSENGQSGSETASGISSDDAGLETSSNMP--ERTATLLDLYSGCGGMSTGLC 362
Query: 280 IGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIY 339
+GA+LSG+KL TRWA+D+N AC+SLK+NHP+T+VRNE AD+FL+LLKEWA LC+ +
Sbjct: 363 LGAALSGLKLETRWAVDLNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCEKYVHQ 422
Query: 340 DTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVY 399
D D N E++E+ + + +EF V++LI + Y + K GVY
Sbjct: 423 DVDS------NLAGSEDQEDAD---------TLDKDEFVVQKLIGIRYDGTGRKK--GVY 465
Query: 400 FKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVS 459
FKV+W+ YGP EDTWEPI LS C K++EFV +G + ILPLPGDVD ICGGPPCQG+S
Sbjct: 466 FKVQWEEYGPEEDTWEPIDNLSDCPLKIREFVQEGRKRKILPLPGDVDVICGGPPCQGIS 525
Query: 460 GFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLV 519
GFNRFRN L+D KN+Q++ FMD++ YLKPKYVLMENVVDILKF+ G+L +YA+ LV
Sbjct: 526 GFNRFRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLV 585
Query: 520 SMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEII 579
+M YQ RLG+M AG YGLPQFR+RVFLWGA LP+YPLPT+++V RG PN F + +
Sbjct: 586 AMKYQARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCM 645
Query: 580 VAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNL 639
VAY Q L+K +LL DA SDLP V N++ D +YG +TEFQ+YIRL R D+++
Sbjct: 646 VAYDETQRPSLKKALLLGDAFSDLPKVENHQPNDVMEYGGSPKTEFQRYIRLGRKDMLDW 705
Query: 640 SSAQMAS-RPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSM 698
S + A L DH+P ++NNDDYERV IP +KGANFRDL GV VG +N V WDP +
Sbjct: 706 SFGEEAGPDEGKLLDHQPLRLNNDDYERVKQIPVKKGANFRDLKGVKVGANNVVEWDPEV 765
Query: 699 ERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVL 758
ERV L SGKPLVPDYAM F S KPFGRLWWD+ V TVVTRA+PHN+++LHP+Q RVL
Sbjct: 766 ERVYLSSGKPLVPDYAMSFIKGKSLKPFGRLWWDQTVPTVVTRAEPHNQVILHPTQARVL 825
Query: 759 TIRENARLQGFPDCYQLFGPVKER 782
TIRENARLQGFPD Y+LFGP+KE+
Sbjct: 826 TIRENARLQGFPDYYRLFGPIKEK 849
>sp|Q94F88|CMT3_ARATH DNA (cytosine-5)-methyltransferase CMT3 OS=Arabidopsis thaliana
GN=CMT3 PE=1 SV=2
Length = 839
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/774 (52%), Positives = 520/774 (67%), Gaps = 56/774 (7%)
Query: 46 VKEEPVELVTRVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKAL------------ 93
VKEEPV +V +K + F+ P+ EA +PDRYK +
Sbjct: 32 VKEEPVTVVEEGEKHVAR--------FLDEPIPESEAKSTWPDRYKPIEVQPPKASSRKK 83
Query: 94 ---NEEEEVLQARCHYTQASVDG-CLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPY 149
+E+ E+++ARCHY +A VD +Y L DDAYV++ EG +I +I+E+FE +G+ Y
Sbjct: 84 TKDDEKVEIIRARCHYRRAIVDERQIYELNDDAYVQSGEGKDPFICKIIEMFEGANGKLY 143
Query: 150 FKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQK 209
F ARWFYR DTV+K+ L+ +KRVF S+++D N L + K I + N E ++
Sbjct: 144 FTARWFYRPSDTVMKEFEILIKKKRVFFSEIQDTNELGLLEKKLNILMIPLN---ENTKE 200
Query: 210 NIPP---CDLYYDMKYTLPHLTFLNINNESNRRDSDASSTISSETG-------------- 252
IP CD + DM Y LP+ TF I E+ S+ SSTISS+T
Sbjct: 201 TIPATENCDFFCDMNYFLPYDTFEAIQQETMMAISE-SSTISSDTDIREGAAAISEIGEC 259
Query: 253 SNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPET 312
S G + +LLDLYSGCGAMSTGLC+GA LSG+ LVT+WA+D+N HACKSL+ NHPET
Sbjct: 260 SQETEGHKKATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHPET 319
Query: 313 KVRNEAADDFLSLLKEWAKLCQYFSIYDTDKVPE----QSLNFMSEEEEEEEEEEEENDD 368
VRN A+DFL LLKEW KLC +FS+ ++ E LN + E+ E+ EE EN+D
Sbjct: 320 NVRNMTAEDFLFLLKEWEKLCIHFSLRNSPNSEEYANLHGLN--NVEDNEDVSEESENED 377
Query: 369 DANVPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLK 428
D V F V++++ + +G P K K G+Y KVRW Y S DTWEPI+GLS C+ K++
Sbjct: 378 DGEV----FTVDKIVGISFGVPKKLLKRGLYLKVRWLNYDDSHDTWEPIEGLSNCRGKIE 433
Query: 429 EFVTKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEY 488
EFV GY+S ILPLPG VD +CGGPPCQG+SG NRFRN LED KN+QLLV+M+++EY
Sbjct: 434 EFVKLGYKSGILPLPGGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIVEY 493
Query: 489 LKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWG 548
LKPK+VLMENVVD+LK + G+LAR+AVGRL+ M+YQ R G+MAAG+YGL QFRLR FLWG
Sbjct: 494 LKPKFVLMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAYGLAQFRLRFFLWG 553
Query: 549 ARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTN 608
A P + +PQ+PLPTH++V RG I EFQ IVAY +L +LL D ISDLP V N
Sbjct: 554 ALPSEIIPQFPLPTHDLVHRGNIVKEFQGNIVAYDEGHTVKLADKLLLKDVISDLPAVAN 613
Query: 609 NESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVC 668
+E DE Y T FQK+IRLR+ D + S ++ S+ +LYDH P +N +DYERVC
Sbjct: 614 SEKRDEITYDKDPTTPFQKFIRLRK-DEASGSQSKSKSKKHVLYDHHPLNLNINDYERVC 672
Query: 669 CIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGR 728
+PKRKGANFRD PGV+VGP N V+ + ERV L+SGK LVPDYA+ + S KPFGR
Sbjct: 673 QVPKRKGANFRDFPGVIVGPGNVVKLEEGKERVKLESGKTLVPDYALTYVDGKSCKPFGR 732
Query: 729 LWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
LWWDEIV TVVTRA+PHN++++HP Q+RVL+IRENARLQGFPD Y+LFGP K++
Sbjct: 733 LWWDEIVPTVVTRAEPHNQVIIHPEQNRVLSIRENARLQGFPDDYKLFGPPKQK 786
>sp|O49139|CMT1_ARATH Putative DNA (cytosine-5)-methyltransferase CMT1 OS=Arabidopsis
thaliana GN=CMT1 PE=5 SV=2
Length = 791
Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/744 (51%), Positives = 519/744 (69%), Gaps = 28/744 (3%)
Query: 59 KKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKALN-----------------EEEEVL- 100
K+ ++ +P+SDL F P+S E+ R+P RY++ E+EE++
Sbjct: 6 KQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQSKKTKLQAPTKKPANKGGKKEDEEIIK 65
Query: 101 QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAED 160
QA+CH+ +A VDG L NL DD YV G + +IA+++ELFE+ DG PY + RW+YR ED
Sbjct: 66 QAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRWYYRPED 125
Query: 161 TVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVAT-NMDLEAKQKNIPPCDLYYD 219
T+I+ + LV KRVFLS+ E+DNPL CI SK IA+V + +Q+ IPPCD YYD
Sbjct: 126 TLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRIEQRVIPPCDYYYD 185
Query: 220 MKYTLPHLTFLNINNESNRRDSDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMSTGLC 279
MKY +P +LN + + D+ +S + S + + E LLDLYSGCGAMSTG C
Sbjct: 186 MKYEVP---YLNFTSADDGSDASSSLSSDSALNCFENLHKDEKFLLDLYSGCGAMSTGFC 242
Query: 280 IGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQYFSIY 339
+GAS+SGVKL+T+W++DIN AC SLK NHPET+VRNEAA+DFL+LLKEW +LC+ FS+
Sbjct: 243 MGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFLALLKEWKRLCEKFSLV 302
Query: 340 DTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKKPGVY 399
+ + P +S++ + +EE EE ++ +E A + EFEVE+ + + +GDP T + +
Sbjct: 303 SSTE-PVESISELEDEEVEENDDIDEASTGAELEPGEFEVEKFLGIMFGDPQGTGEKTLQ 361
Query: 400 FKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPCQGVS 459
VRWKGY S DTWEP GL CKEKLKE+V G++S++LPLPG V +CGGPPCQG+S
Sbjct: 362 LMVRWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLPGTVYTVCGGPPCQGIS 421
Query: 460 GFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLV 519
G+NR+RN +A LED KN+QLLVF+D+I++LKP YVLMENVVD+L+FS GFLAR+AV V
Sbjct: 422 GYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFV 481
Query: 520 SMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEII 579
+M+YQTRLG+MAAGSYGLPQ R RVFLW A+P +KLP YPLPTHE+ + P EF+++
Sbjct: 482 AMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKKFNTPKEFKDLQ 541
Query: 580 VAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVA-RTEFQKYIRLRRHDVVN 638
V + +L+ + L+DAISDLP VTN + D Y A +TEF+ +I L+R + +
Sbjct: 542 VGRIQMEFLKLDNALTLADAISDLPPVTNYVANDVMDYNDAAPKTEFENFISLKRSETLL 601
Query: 639 LSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSM 698
+ +R L+DH+P + +DD ERV IPK+KGAN+RD+PGVLV +NK +P
Sbjct: 602 PAFGGDPTR--RLFDHQPLVLGDDDLERVSYIPKQKGANYRDMPGVLVH-NNKAEINPRF 658
Query: 699 ERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVL 758
R LKSGK +VP YA+ F S KPFGRLW DEIVNTVVTRA+PHN+ ++HP Q+RVL
Sbjct: 659 -RAKLKSGKNVVPAYAISFIKGKSKKPFGRLWGDEIVNTVVTRAEPHNQCVIHPMQNRVL 717
Query: 759 TIRENARLQGFPDCYQLFGPVKER 782
++RENARLQGFPDCY+L G +KE+
Sbjct: 718 SVRENARLQGFPDCYKLCGTIKEK 741
>sp|Q94F87|CMT2_ARATH DNA (cytosine-5)-methyltransferase CMT2 OS=Arabidopsis thaliana
GN=CMT2 PE=2 SV=3
Length = 1295
Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/747 (49%), Positives = 499/747 (66%), Gaps = 30/747 (4%)
Query: 54 VTRVKKKTQKNKPDSDLFFVSPPVSADEALKRYPDRYKAL-------------NEEEEVL 100
VTR + Q + S FF+ P+S +EA +R+ RY+ +E++ V
Sbjct: 507 VTRTAVQEQNKR--SICFFIGEPLSCEEAQERWRWRYELKERKSKSRGQQSEDDEDKIVA 564
Query: 101 QARCHYTQASVDGCLYNLGDDAYVKAEEGAVDYIARIVELFESVDGEPYFKARWFYRAED 160
CHY+QA VDG ++LGD AY+K EE ++ +IVE F++ DGE YF+ +WFYRA D
Sbjct: 565 NVECHYSQAKVDGHTFSLGDFAYIKGEEEET-HVGQIVEFFKTTDGESYFRVQWFYRATD 623
Query: 161 TVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAKQKNIPPCDLYYDM 220
T+++ A D++R+F S V +DNP++C++SK + +V+ + L+ N D Y+DM
Sbjct: 624 TIMERQATNHDKRRLFYSTVMNDNPVDCLISKVTVLQVSPRVGLKP---NSIKSDYYFDM 680
Query: 221 KYTLPHLTFLNINNESNRRD-----SDASSTISSETGSNSPIGQPEMSLLDLYSGCGAMS 275
+Y + + TF + N + +D T S+E+ E+ +LDLYSGCG MS
Sbjct: 681 EYCVEYSTFQTLRNPKTSENKLECCADVVPTESTESILKKKSFSGELPVLDLYSGCGGMS 740
Query: 276 TGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAADDFLSLLKEWAKLCQY 335
TGL +GA +SGV +VT+WA+D N ACKSLK NHP T+VRN+AA DFL LLKEW KLC+
Sbjct: 741 TGLSLGAKISGVDVVTKWAVDQNTAACKSLKLNHPNTQVRNDAAGDFLQLLKEWDKLCKR 800
Query: 336 FSIYDTDKVPEQSLNFMSEEEEEEEEEEEENDDDANVPNEEFEVERLIAVCYGDPNKTKK 395
+ +++ D Q + + +E + D + +EE+EVE+L+ +C+GD +KT K
Sbjct: 801 Y-VFNND----QRTDTLRSVNSTKETSGSSSSSDDDSDSEEYEVEKLVDICFGDHDKTGK 855
Query: 396 PGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTKGYRSNILPLPGDVDFICGGPPC 455
G+ FKV WKGY EDTWE + LS C++ ++EFVT G++S ILPLPG V ICGGPPC
Sbjct: 856 NGLKFKVHWKGYRSDEDTWELAEELSNCQDAIREFVTSGFKSKILPLPGRVGVICGGPPC 915
Query: 456 QGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAV 515
QG+SG+NR RN + L D +N+Q++VFMD++EYLKP YVLMENVVDIL+ G L RYA+
Sbjct: 916 QGISGYNRHRNVDSPLNDERNQQIIVFMDIVEYLKPSYVLMENVVDILRMDKGSLGRYAL 975
Query: 516 GRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEF 575
RLV+M YQ RLGIM AG YGL QFR RVF+WGA P K LP +PLPTH+++ R +P EF
Sbjct: 976 SRLVNMRYQARLGIMTAGCYGLSQFRSRVFMWGAVPNKNLPPFPLPTHDVIVRYGLPLEF 1035
Query: 576 QEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHD 635
+ +VAYA QP +LEK ++L DAISDLP V+N+E ++ Y ++ +T+FQ+YIR + D
Sbjct: 1036 ERNVVAYAEGQPRKLEKALVLKDAISDLPHVSNDEDREKLPYESLPKTDFQRYIRSTKRD 1095
Query: 636 VVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDNKVRWD 695
+ + R LL+DHRPF +N DDY RVC IPKRKGANFRDLPG++V +N V D
Sbjct: 1096 LTGSAIDNCNKRTMLLHDHRPFHINEDDYARVCQIPKRKGANFRDLPGLIV-RNNTVCRD 1154
Query: 696 PSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQD 755
PSME V+L SGKPLVP Y F+ S +PF RLWWDE V TV+T H++ LLHP QD
Sbjct: 1155 PSMEPVILPSGKPLVPGYVFTFQQGKSKRPFARLWWDETVPTVLTVPTCHSQALLHPEQD 1214
Query: 756 RVLTIRENARLQGFPDCYQLFGPVKER 782
RVLTIRE+ARLQGFPD +Q G +KER
Sbjct: 1215 RVLTIRESARLQGFPDYFQFCGTIKER 1241
>sp|Q7Y1I7|DNM1A_ORYSJ DNA (cytosine-5)-methyltransferase 1A OS=Oryza sativa subsp. japonica
GN=MET1A PE=2 SV=1
Length = 1527
Score = 202 bits (513), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 184/355 (51%), Gaps = 49/355 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP+PG+V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +P++ L+ENV
Sbjct: 1182 LPVPGEVEFINGGPPCQGFSGMNRFN--QSPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1239
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R + L+ M YQ R GI+ AG+YG+ Q R R F+W A P + LP++P
Sbjct: 1240 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKRAFIWAAAPGETLPEWP 1299
Query: 560 LPTHEIVA---RGVIPN-EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H + + +P+ +F + + A P + + + D I DLP V N +
Sbjct: 1300 EPMHVFASPELKITLPDGKFYAAVKSTAAGAPF---RSITVRDTIGDLPAVENGAGKPTI 1356
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+YG+ + FQK IR + MAS L DH ++N + R IPKR G
Sbjct: 1357 QYGSGPVSWFQKKIR-----------SDMAS----LNDHISKEMNELNLIRCKHIPKRPG 1401
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRL 729
++ DLP E+V L +G+ + +P+ A + H +GRL
Sbjct: 1402 CDWHDLPD---------------EKVKLSTGQMVDLIPWCLPNTAKR--HNQWKGLYGRL 1444
Query: 730 WWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
W+ T VT QP ++ HP QDR++T+RE AR QGFPD Y+ G ++ +
Sbjct: 1445 DWEGNFPTSVTDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYRFAGNIQNK 1499
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 18/188 (9%)
Query: 151 KARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSK--AKIAEVATNMDLEAKQ 208
K R FYR +D + A D + V+ S+ P+ I K ++ + N DL A
Sbjct: 970 KVRRFYRPDD-ISSTKAYSSDIREVYYSEDIISVPVVMIEGKCEVRLKDDLPNSDLPAVV 1028
Query: 209 KNIPPCDLYYD-----MKYTLPHLTFLNINNE--SNRRDSDASSTISSETGSNSPI-GQP 260
+++ C+ YD +K P++ + + + +++++ GS+ P GQ
Sbjct: 1029 EHVFCCEYLYDPANGALKQLPPNVRLVTLTRKVPASKKNKGKQICDIELGGSDKPKDGQS 1088
Query: 261 E--MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEA 318
E ++ LD+++GCG +S GL SG+ L T+WAI+ A + NHPE V E
Sbjct: 1089 ENCLATLDIFAGCGGLSEGL----QRSGLSL-TKWAIEYEEPAGDAFGENHPEAAVFVEN 1143
Query: 319 ADDFLSLL 326
+ L +
Sbjct: 1144 CNVILKAI 1151
>sp|B1Q3J6|DNM1B_ORYSJ DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica
GN=MET1B PE=2 SV=1
Length = 1529
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 176/355 (49%), Gaps = 49/355 (13%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP+PG+V+FI GGPPCQG SG NRF Q+ ++ +L F+ EY +P++ L+ENV
Sbjct: 1183 LPVPGEVEFINGGPPCQGFSGMNRFN--QSPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1240
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F+ G R V L+ M YQ R GI+ AG++G+ Q R R F+W A P + LP +P
Sbjct: 1241 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGVAQSRKRAFIWAAAPGETLPDWP 1300
Query: 560 LPTHEIVARGVIPN----EFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER 615
P H + + N ++ + A P + + + D I DLP V N S+
Sbjct: 1301 EPMHVFASPELKINLPDGKYYAAAKSTAGGAPF---RAITVRDTIGDLPKVENGASKLLL 1357
Query: 616 KYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRKG 675
+YG + FQK IR L DH ++N + R IPKR G
Sbjct: 1358 EYGGEPISWFQKKIR---------------GNTIALNDHISKEMNELNLIRCQRIPKRPG 1402
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPL------VPDYAMKFEHQSSTKPFGRL 729
++ DLP E+V L SG+ + +P+ A + H +GRL
Sbjct: 1403 CDWHDLPD---------------EKVKLSSGQLVDLIPWCLPNTAKR--HNQWKGLYGRL 1445
Query: 730 WWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
W+ T VT QP ++ HP QDR++T+RE AR QGFPD YQ G ++ +
Sbjct: 1446 DWEGNFPTSVTDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDNYQFAGNIQSK 1500
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 37/184 (20%)
Query: 153 RWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVA--TNMDLEAKQKN 210
R FYR +D + A + D + V+ S+ P++ I K ++ + +N D+ ++
Sbjct: 972 RRFYRPDD-ISSAKAYVSDIREVYYSENIVKVPVDMIEGKCEVKKKIDISNSDVPVMVEH 1030
Query: 211 IPPCDLYYD-----MKYTLPHLTFLNINN---------------ESNRRDSDASSTISSE 250
C+ +YD +K P++ +++ ES++ DSD + +S E
Sbjct: 1031 EFFCEHFYDPATGALKQLPPNVKLMSVQQKATGALKKNKGKQICESDQVDSDKCTKVSKE 1090
Query: 251 TGSNSPIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHP 310
++ LD+++GCG +S GL +GV T+WAI+ A ++ NHP
Sbjct: 1091 N---------RLATLDIFAGCGGLSEGL----QQAGVSF-TKWAIEYEEPAGEAFTKNHP 1136
Query: 311 ETKV 314
E V
Sbjct: 1137 EAAV 1140
>sp|P34881|DNMT1_ARATH DNA (cytosine-5)-methyltransferase 1 OS=Arabidopsis thaliana GN=DMT1
PE=1 SV=1
Length = 1534
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 120/356 (33%), Positives = 172/356 (48%), Gaps = 43/356 (12%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
+ + LPLPG VDFI GGPPCQG SG NRF Q++ ++ +L F+ +Y +P+Y L
Sbjct: 1179 QKSTLPLPGQVDFINGGPPCQGFSGMNRFN--QSSWSKVQCEMILAFLSFADYFRPRYFL 1236
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + F+ G + + L+ M YQ R GI+ AG+YG+ Q R R F+W A P + L
Sbjct: 1237 LENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAAAPEEVL 1296
Query: 556 PQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLE-KGVLLSDAISDLPLVTNNESEDE 614
P++P P H + + Q + A + + + + D I DLP V N +S
Sbjct: 1297 PEWPEPMHVFGVPKLKISLSQGLHYAAVRSTALGAPFRPITVRDTIGDLPSVENGDSRTN 1356
Query: 615 RKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKRK 674
++Y VA + FQK IR L DH +N + R IP R
Sbjct: 1357 KEYKEVAVSWFQKEIR---------------GNTIALTDHICKAMNELNLIRCKLIPTRP 1401
Query: 675 GANFRDLPGVLVGPDNKVRWDPSMERVMLKSGK-----PL-VPDYAMKFEHQSSTKPFGR 728
GA++ DLP +V L G+ P +P+ A + H +GR
Sbjct: 1402 GADWHDLP---------------KRKVTLSDGRVEEMIPFCLPNTAER--HNGWKGLYGR 1444
Query: 729 LWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
L W T VT QP ++ HP Q R+LT+RE AR QGFPD Y+ G + +
Sbjct: 1445 LDWQGNFPTSVTDPQPMGKVGMCFHPEQHRILTVRECARSQGFPDSYEFAGNINHK 1500
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 25/180 (13%)
Query: 151 KARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKIAEVATNMDLEAK--- 207
K R FYR ED V + A D + ++ S P + K ++ + ++M L +
Sbjct: 970 KVRRFYRPED-VSAEKAYASDIQELYFSQDTVVLPPGALEGKCEVRK-KSDMPLSREYPI 1027
Query: 208 QKNIPPCDLYYDM-KYTLPHL------TFLNINNES---NRRDSDASSTISSETGSNSPI 257
+I CDL++D K +L L F I +++ ++ S I SE P+
Sbjct: 1028 SDHIFFCDLFFDTSKGSLKQLPANMKPKFSTIKDDTLLRKKKGKGVESEIESEI--VKPV 1085
Query: 258 GQPE---MSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKV 314
P+ ++ LD+++GCG +S GL A +S K WAI+ A ++ K NHPE+ V
Sbjct: 1086 EPPKEIRLATLDIFAGCGGLSHGL-KKAGVSDAK----WAIEYEEPAGQAFKQNHPESTV 1140
>sp|Q27746|DNMT1_PARLI DNA (cytosine-5)-methyltransferase PliMCI OS=Paracentrotus lividus
GN=DNMT PE=2 SV=1
Length = 1612
Score = 174 bits (441), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 191/400 (47%), Gaps = 59/400 (14%)
Query: 423 CKEKLKEFVTKGYRSN----ILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQ 478
C E L+ V +G +++ LP GDV+ +CGGPPCQG SG NRF + + + KN
Sbjct: 1183 CNELLR-LVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYS--KFKNSL 1239
Query: 479 LLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLP 538
+ ++ +Y +P++ L+ENV + + + + + A+ L+ M YQ GI+ AG YG+P
Sbjct: 1240 ISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGVP 1299
Query: 539 QFRLRVFLWGARPFKKLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLE--KGVLL 596
Q R R + A P +KLP YP P H +R + +NNQ C + + +
Sbjct: 1300 QTRRRAIILAAAPGEKLPFYPEPLHVFSSRACSLSVMIGEKKIESNNQWCLSAPYRTITV 1359
Query: 597 SDAISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRP 656
D +SDLP + N + E Y +++FQK IR ++ +L DH
Sbjct: 1360 RDTMSDLPTINNGAQKLEISYDGEPQSDFQKKIRGNQYQ-------------PILRDHIC 1406
Query: 657 FQVNNDDYERVCCIPKRKGANFRDLPGVLVGPDN-----KVRW----------------- 694
+++ R+ IP G+++RDLP + V + K+R+
Sbjct: 1407 KDMSSLVAARMKHIPLAPGSDWRDLPNIPVTLKDGTTCRKLRYTHKDKKNGKSSTGALRG 1466
Query: 695 ----------DPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQP 744
DPS +R +P + H + +GRL WD +T VT +P
Sbjct: 1467 VCSCAEGDACDPS-DRQFSTLIPWCLPHTGNR--HNNWAGLYGRLEWDGFFSTTVTNPEP 1523
Query: 745 HNRI--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+ +LHP Q RV+++RE AR QGFPD Y+ FG + ++
Sbjct: 1524 MGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGSILDK 1563
Score = 41.2 bits (95), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 93 LNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFK 151
L+E EV + R +Y A +D +GD + ++ ++AR++ +++ GE F
Sbjct: 722 LDEPTEVTEERAYYKAAMLDDEKIEIGDCVLIHPDDPTKPLFMARVIYMWQESQGEMMFH 781
Query: 152 ARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
A+WF +TV+ + + D VF D D L + +K +
Sbjct: 782 AQWFVYGSETVLGETS---DPLEVFPIDECQDTYLGSVNAKCTV 822
Score = 35.8 bits (81), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 261 EMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAAD 320
++ LD+++GCG +S G +G+ + WAI+ A ++ + N+P + V ++ +
Sbjct: 1130 KLKCLDVFAGCGGLSEGF----HQAGI-CESSWAIEKEEPAAQAYRLNNPGSTVFSDDCN 1184
Query: 321 DFLSLLKEWAK 331
+ L L+ + K
Sbjct: 1185 ELLRLVMQGEK 1195
>sp|Q24K09|DNMT1_BOVIN DNA (cytosine-5)-methyltransferase 1 OS=Bos taurus GN=DNMT1 PE=2 SV=1
Length = 1611
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 176/382 (46%), Gaps = 58/382 (15%)
Query: 436 RSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVL 495
R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P+Y L
Sbjct: 1204 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1261
Query: 496 MENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKL 555
+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P + L
Sbjct: 1262 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEPL 1321
Query: 556 PQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNN 609
P +P P H R V +F I ++ + + + D +SDLP + N
Sbjct: 1322 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIRNG 1377
Query: 610 ESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCC 669
S E Y ++ FQ+ +R ++ + L DH ++ R+
Sbjct: 1378 ASALEISYNGEPQSWFQRQLRGSQYQPI-------------LRDHICKDMSALVAARMRH 1424
Query: 670 IPKRKGANFRDLPGVLVGPDN-----KVRWDPSMERVMLKS------------GKPLVPD 712
IP G+++RDLP + V + K+R++ ++ S GKP P
Sbjct: 1425 IPLAPGSDWRDLPNIEVRLSDGTLARKLRYNYHDKKNGCSSSGALRGVCSCVEGKPCEP- 1483
Query: 713 YAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRV 757
A +F H +GRL WD +T VT +P + +LHP Q RV
Sbjct: 1484 AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRV 1543
Query: 758 LTIRENARLQGFPDCYQLFGPV 779
+++RE AR QGFPD Y+LFG +
Sbjct: 1544 VSVRECARSQGFPDTYRLFGNI 1565
Score = 40.4 bits (93), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P + V
Sbjct: 1131 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGSTVFT 1185
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 1186 EDCNVLLKLV 1195
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 741 KSYYKKVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 800
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK ++
Sbjct: 801 V---LGATSDPLELFLVDECEDMQLSYIHSKVQV 831
>sp|Q92072|DNMT1_CHICK DNA (cytosine-5)-methyltransferase 1 OS=Gallus gallus GN=DNMT1 PE=1
SV=1
Length = 1537
Score = 166 bits (419), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 184/397 (46%), Gaps = 60/397 (15%)
Query: 427 LKEFVTKGYRSNIL----PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVF 482
L + V G ++N L P GDV+ +CGGPPCQG SG NRF + KN ++ F
Sbjct: 1109 LLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSF 1166
Query: 483 MDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRL 542
+ +Y +P++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R
Sbjct: 1167 LSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRR 1226
Query: 543 RVFLWGARPFKKLPQYPLPTHEIVARG----VIPNEFQEIIVAYANNQPCQLEKGVLLSD 598
R + A P +KLP +P P H R V+ ++ + V+ + + + D
Sbjct: 1227 RAIVLAAAPGEKLPMFPEPLHVFAPRACQLSVVVDDKK--FVSNITRTYSGPFRTITVRD 1284
Query: 599 AISDLPLVTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQ 658
+SDLP + N S E Y ++ FQ+ IR ++ +L DH
Sbjct: 1285 TMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQ-------------PILRDHICKD 1331
Query: 659 VNNDDYERVCCIPKRKGANFRDLPGVLV-----GPDNKVRWDPSMERVMLKS-------- 705
++ R+ IP G+++RDLP + V K+R+ ++ S
Sbjct: 1332 MSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTSTRKLRYTHHEKKNGRSSSGALRGVC 1391
Query: 706 ----GKP--------------LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNR 747
GKP +P + H + +GRL WD +T VT +P +
Sbjct: 1392 SCAEGKPCDPADRQFNTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGK 1449
Query: 748 I--LLHPSQDRVLTIRENARLQGFPDCYQLFGPVKER 782
+LHP Q RV+++RE AR QGFPD Y+LFG + ++
Sbjct: 1450 QGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDK 1486
Score = 42.0 bits (97), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 260 PEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRNEAA 319
P++ LD++SGCG +S G +GV T WAI++ A ++ + N+P T V E
Sbjct: 1052 PKLRTLDVFSGCGGLSEGF----HQAGVS-ETLWAIEMWEPAAQAFRLNNPGTTVFTEDC 1106
Query: 320 DDFLSLL 326
+ L L+
Sbjct: 1107 NVLLKLV 1113
>sp|P26358|DNMT1_HUMAN DNA (cytosine-5)-methyltransferase 1 OS=Homo sapiens GN=DNMT1 PE=1
SV=2
Length = 1616
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 177/387 (45%), Gaps = 59/387 (15%)
Query: 432 TKGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKP 491
T R LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P
Sbjct: 1203 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRP 1260
Query: 492 KYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP 551
++ L+ENV + + F + + + LV M YQ G++ AG YG+ Q R R + A P
Sbjct: 1261 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1320
Query: 552 FKKLPQYPLPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPL 605
+KLP +P P H R V +F I ++ + + + D +SDLP
Sbjct: 1321 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1376
Query: 606 VTNNESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYE 665
V N S E Y ++ FQ+ +R ++ + L DH ++
Sbjct: 1377 VRNGASALEISYNGEPQSWFQRQLRGAQYQPI-------------LRDHICKDMSALVAA 1423
Query: 666 RVCCIPKRKGANFRDLPGVLVGPDN-----KVRWDPSMER-------------VMLKSGK 707
R+ IP G+++RDLP + V + K+R+ + +++GK
Sbjct: 1424 RMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGK 1483
Query: 708 PLVPDYAMKF-------------EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHP 752
P A +F H +GRL WD +T VT +P + +LHP
Sbjct: 1484 ACDP-AARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHP 1542
Query: 753 SQDRVLTIRENARLQGFPDCYQLFGPV 779
Q RV+++RE AR QGFPD Y+LFG +
Sbjct: 1543 EQHRVVSVRECARSQGFPDTYRLFGNI 1569
Score = 41.2 bits (95), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 103 RCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDGEPYFKARWFYRAEDT 161
+ +Y + +D +GD V ++ + Y+AR+ L+E F A WF DT
Sbjct: 744 KSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDT 803
Query: 162 VIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
V L D +FL D +D L+ I SK K+
Sbjct: 804 V---LGATSDPLELFLVDECEDMQLSYIHSKVKV 834
Score = 40.4 bits (93), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P + V
Sbjct: 1134 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQAFRLNNPGSTVFT 1188
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 1189 EDCNILLKLV 1198
>sp|P13864|DNMT1_MOUSE DNA (cytosine-5)-methyltransferase 1 OS=Mus musculus GN=Dnmt1 PE=1
SV=5
Length = 1620
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/376 (31%), Positives = 172/376 (45%), Gaps = 48/376 (12%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 1214 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1271
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + + + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1272 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1331
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
P H R V +F I ++ + + + D +SDLP + N S
Sbjct: 1332 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1387
Query: 614 ERKYGTVARTEFQKYIR-------LRRH---DVVNLSSAQMASRP----SLLYDHRPFQV 659
E Y + FQ+ +R LR H D+ L +A+M P S D QV
Sbjct: 1388 EIPYNGEPLSWFQRQLRGSHYQPILRDHICKDMSPLVAARMRHIPLFPGSDWRDLPNIQV 1447
Query: 660 NNDDYERVCCIPKRKGANFRD----------LPGVLVGPDNKVRWDPSMERVMLKSGKP- 708
D I + F D L GV + K DP E + P
Sbjct: 1448 RLGD----GVIAHKLQYTFHDVKNGYSSTGALRGVCSCAEGKA-CDP--ESRQFSTLIPW 1500
Query: 709 LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTIRENARL 766
+P + H + +GRL WD +T VT +P + +LHP Q RV+++RE AR
Sbjct: 1501 CLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARS 1558
Query: 767 QGFPDCYQLFGPVKER 782
QGFPD Y+ FG + +R
Sbjct: 1559 QGFPDSYRFFGNILDR 1574
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 88 DRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIARIVELFESVDG 146
DR L + ++ + R +Y + S+D + +GD V ++ + Y+AR+ L+E +G
Sbjct: 732 DRISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNG 791
Query: 147 EPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
+ F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 792 QMMFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 837
Score = 41.6 bits (96), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG +S G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1137 IKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFT 1191
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 1192 EDCNVLLKLV 1201
>sp|Q9Z330|DNMT1_RAT DNA (cytosine-5)-methyltransferase 1 OS=Rattus norvegicus GN=Dnmt1
PE=1 SV=2
Length = 1622
Score = 155 bits (393), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 170/382 (44%), Gaps = 60/382 (15%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
LP GDV+ +CGGPPCQG SG NRF + KN ++ F+ +Y +P++ L+ENV
Sbjct: 1216 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1273
Query: 500 VDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+ + F + + + LV M YQ G++ AG YG+ Q R R + A P +KLP +P
Sbjct: 1274 RNFVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1333
Query: 560 LPTHEIVARG------VIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESED 613
P H R V +F I ++ + + + D +SDLP + N S
Sbjct: 1334 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITMRDTMSDLPEIQNGASAP 1389
Query: 614 ERKYGTVARTEFQKYIRLRRHDVVNLSSAQMASRPSLLYDHRPFQVNNDDYERVCCIPKR 673
E Y K+ R V+ +A + P+ P R+ IP
Sbjct: 1390 EISY---------KW----RATVLVPEAAARVALPAHPQGPYPQVHERAGGCRMRHIPLS 1436
Query: 674 KGANFRDLPGVLVG-----PDNKVRWDPSMERVMLKSGKPL------------------- 709
G+++RDLP + V NK+R+ + S L
Sbjct: 1437 PGSDWRDLPNIQVRLRDGVITNKLRYTFHDTKNGCSSTGALRGVCSCAEGKTCDPASRQF 1496
Query: 710 -------VPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPHNRI--LLHPSQDRVLTI 760
+P + H + +GRL WD +T VT +P + +LHP Q RV+++
Sbjct: 1497 NTLIPWCLPHTGNRHNHWAGL--YGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSV 1554
Query: 761 RENARLQGFPDCYQLFGPVKER 782
RE AR QGFPD Y+LFG + +R
Sbjct: 1555 RECARSQGFPDTYRLFGNILDR 1576
Score = 41.2 bits (95), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 257 IGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPETKVRN 316
I P++ LD++SGCG GL G +G+ T WAI++ A ++ + N+P T V
Sbjct: 1139 IKLPKLRTLDVFSGCG----GLTEGFHQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFT 1193
Query: 317 EAADDFLSLL 326
E + L L+
Sbjct: 1194 EDCNVLLKLV 1203
Score = 33.5 bits (75), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 29/180 (16%)
Query: 17 SNHSKARRRKLNLAEQQHQQQEEQREDEEVKEEPVELVTRVKKKTQKNKPDSDLFFVSPP 76
S + +RR NLA ++ + EE D+++ E P KK ++NK
Sbjct: 686 SKQACLKRRCPNLAVKEADEDEEA--DDDIPELPSPKKLHQGKKKKQNK----------- 732
Query: 77 VSADEALKRYPDRYKALNEEEEVLQARCHYTQASVDGCLYNLGDDAYVKAEEGAVD-YIA 135
DR L E ++ + R +Y + S+D +GD V ++ + Y+A
Sbjct: 733 -----------DRISWLGEPVKIEENRTYYWKVSIDEETLEVGDCVSVIPDDPSKPLYLA 781
Query: 136 RIVELFESVDGEPYFKARWFYRAEDTVIKDLACLVDRKRVFLSDVEDDNPLNCIVSKAKI 195
R+ L+E +G+ F A WF DTV L D +FL ++ L+ I SK K+
Sbjct: 782 RVTALWEDKNGQ-MFHAHWFCAGTDTV---LGATSDPLELFLVGECENMQLSYIHSKVKV 837
>sp|P94147|MTA1_RUEGE Modification methylase AgeI OS=Ruegeria gelatinovora GN=ageIM PE=3
SV=1
Length = 429
Score = 130 bits (326), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 169/361 (46%), Gaps = 35/361 (9%)
Query: 433 KGYRSNILPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPK 492
K R ++ PG VD + GGPPCQG S + + R+ +D +N+ + + +E +PK
Sbjct: 58 KKIREDLGVAPGQVDVVMGGPPCQGFSTYGQRRD-----DDARNQLYVPYFGFVEEFRPK 112
Query: 493 YVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPF 552
L+ENVV +L SGG + V R ++ Y + + A YG+PQ R RVF++GA
Sbjct: 113 AFLIENVVGLLSMSGGAVLADMVARAEALGYAADVVTLDACEYGVPQHRRRVFIFGAADG 172
Query: 553 KKLPQYPLPTHEIVAR-GVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLP--LVTNN 609
+++ P P+H R GV+ N+ + + QP + + DAISDLP ++
Sbjct: 173 QRI-DPPQPSHVNGKRSGVVLNDQPSLFFDGPSIQPA-----LTVRDAISDLPDEVLVPR 226
Query: 610 ESEDERKYGTVARTEFQKYIRLRRHDVVNLSSAQMAS----RPSLLYDHRPFQVNNDDYE 665
+++ +Y +TE+Q+ +R ++ + S+ +M R ++L+ P E
Sbjct: 227 DTQKPMEYPEPPKTEYQRLMRGNSTELTHHSAKRMLGIRRLRLAMLH---PGDYGTKIEE 283
Query: 666 RVC--------CIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKF 717
R+ GA RD + R + R +LK G P M+F
Sbjct: 284 RLADGGLNDELIDLMMGGAGMRDAAEC----RTQDREKEAALREVLKGGH-TTPAKVMEF 338
Query: 718 -EHQSSTKPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLF 776
+ Q + RL WD +TVV +HP DR +++RE AR Q FPD Y+
Sbjct: 339 LDSQGFANKYRRLRWDAPSHTVVAHMARDCSDFVHPGIDRFVSVREAARFQSFPDTYRFP 398
Query: 777 G 777
G
Sbjct: 399 G 399
>sp|P05302|MTD1_DESNO Modification methylase DdeI OS=Desulfomicrobium norvegicum (strain
DSM 1741 / NCIMB 8310) GN=ddeIM PE=3 SV=1
Length = 415
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 136/342 (39%), Gaps = 83/342 (24%)
Query: 445 DVDFICGGPPCQGVS-GFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL 503
DVD I GGPPCQG S NR + +D +N + F+ +++ PK+ +MENV+ IL
Sbjct: 66 DVDGIIGGPPCQGFSLSGNRDQ------KDPRNSLFVDFVRFVKFFSPKFFVMENVLGIL 119
Query: 504 KF---SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPL 560
S ++ ++ Y+ + I+ A YG+PQ R RVF G + + L Q L
Sbjct: 120 SMKTKSRQYVKDIIAEEFSNVGYKVCVIILNACDYGVPQSRQRVFFIGLKSDRPLNQQIL 179
Query: 561 PTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDERKYGTV 620
VI +E+ L +AISDLP++ E + + Y
Sbjct: 180 TP----PSKVIESEYTS------------------LEEAISDLPVIEAGEGGEVQDYPVA 217
Query: 621 ARTEFQKYIRLRRHDVVNLSSAQMASR-----PSLLYDHRPFQVNNDDYERVCCIPKRKG 675
R ++Q+ +R V N + + R ++ + V+ + +R KR
Sbjct: 218 PRNKYQENMRKGSTCVYNHVAMRHTQRLVDRFAAIKFGQSVKHVSEEHSQR-----KRGD 272
Query: 676 ANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTKPFGRLWWDEIV 735
AN + G + +N +R P KP P A F+
Sbjct: 273 AN--SISGKVFSQNN-MRPYPY---------KP-CPTVAASFQSN--------------- 304
Query: 736 NTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+HP +R T RE AR+Q FPD Y G
Sbjct: 305 -------------FIHPFYNRNFTAREGARIQSFPDTYIFQG 333
>sp|P52311|MTX2_XANOR Modification methylase XorII OS=Xanthomonas oryzae pv. oryzae
(strain KACC10331 / KXO85) GN=xorIIM PE=3 SV=2
Length = 424
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 131/351 (37%), Gaps = 110/351 (31%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDIL- 503
D+D + GG PCQG S + AL+D +N+ + ++ V+ LKPKY + ENV +
Sbjct: 73 DIDIVIGGAPCQGFSLIGK-----RALDDSRNQLVHHYVRVVMELKPKYFVFENVKGLTV 127
Query: 504 ----KFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYP 559
+F + + G D T ++ A YG+PQ R R+ L GAR LP YP
Sbjct: 128 GKHRQFLKEVIEAFQNG---GYDVVTDYRVLNAADYGVPQDRRRLILMGARKGLPLPAYP 184
Query: 560 LPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVTNNESEDER---- 615
PT + DAI D+P + ER
Sbjct: 185 EPTGRTT-----------------------------VGDAIGDIPDAESFPELWERDWVK 215
Query: 616 -KYGTVARTEFQKYIRLRRHDVVNLSSAQ----MASRPSLLYDH------RPFQVNNDDY 664
KYG + + Y+R ++ D + + M SLL DH R + DD
Sbjct: 216 AKYGKP--STYAAYLRGKKDDPTDFGYRRQFDPMLLTGSLLTDHTELSRQRFAAIAPDDV 273
Query: 665 ERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSSTK 724
E V + F+ L L G N +R + +R S +P
Sbjct: 274 EPV--------SRFKKL--ALNGICNTLRAGTASDRGAFTSPRP---------------- 307
Query: 725 PFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQL 775
+HP+ RV+T+RE ARL +PD ++
Sbjct: 308 -------------------------IHPTVPRVITVREAARLHSYPDWFRF 333
Score = 36.6 bits (83), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 12/56 (21%)
Query: 256 PIGQPEMSLLDLYSGCGAMSTGLCIGASLSGVKLVTRWAIDINPHACKSLKFNHPE 311
PIG +DL++G G GL +G +G LV A+DI+P C + KFN P+
Sbjct: 4 PIG------IDLFAGAG----GLSLGFEQAGFDLVA--AVDIDPIHCAAHKFNFPK 47
>sp|Q8EL95|MT36_OCEIH Putative modification methylase OB3336 OS=Oceanobacillus iheyensis
(strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831)
GN=OB3336 PE=3 SV=1
Length = 460
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 145/350 (41%), Gaps = 41/350 (11%)
Query: 448 FICGGPPCQGVSGFNRFRNPQAALE-----DIKNRQLLVFMDVIEYLKPKYVLMENVVDI 502
+ GGPPCQ S R + E D + + F+D ++ ++MENV +
Sbjct: 90 IVIGGPPCQAYSKIGRAKLKSLGEERRQENDARGKLYENFLDYALHVDANVIVMENVPEA 149
Query: 503 LKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP-FKKLPQYPLP 561
+ + G + L++ Y ++ A +G+PQ R+R+F+ + K+ P P
Sbjct: 150 VNYGGVNIPDTVCDILINKGYDAIWTVLNAADFGVPQTRVRLFVMAIKKDIGKIKFIPEP 209
Query: 562 THE---IVARGVIPNEF--QEIIVAYANNQPC----QLEKGVLLSDAISDLPLV------ 606
TH+ V R + + EI + QP L V + DAI DLP +
Sbjct: 210 THKPHINVKRQSVNVRWMQSEIRNSKYYKQPNIPDETLSDWVTVGDAIGDLPNLFPVYNQ 269
Query: 607 --TNNESEDERKYGTVARTEFQKYIRL-RRHDVVNLSSAQMASRPSLLYDHRPFQVNNDD 663
N + ++Y + + FQK +R+ + D V + + R ++D N D
Sbjct: 270 KYKNYKPMMMKEYKSPPQNTFQKLMRINNKVDKVTGNMFRNTKRDFSIFDKMEEGDNYLD 329
Query: 664 YERVCCIPKRKGANFRDLPGVLVGPDNKVRWDPSMERVMLKSGKPLVPDYAMKFEHQSST 723
+ RK ++ + +N+ + +R+ VP Y+ +
Sbjct: 330 AHNIAMSLLRK-----EMRKSGITKENEFEYRLLKDRI--------VPPYST----EKFV 372
Query: 724 KPFGRLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCY 773
+ + +L D+ +T+V LHP + R +++RE ARLQ FPD +
Sbjct: 373 EKWRKLSSDKPSHTLVAHLSTDTYSHLHPREPRGISVREAARLQSFPDDF 422
>sp|O52702|MTA1_ACEPA Modification methylase ApaLI OS=Acetobacter pasteurianus GN=apaLIM
PE=3 SV=1
Length = 429
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 58/107 (54%), Gaps = 15/107 (14%)
Query: 449 ICGGPPCQGVS--GFNRFRNPQAALEDIKNRQLLVF--MDVIEYLKPKYVLMENVVDILK 504
+ GGPPCQG S G F +P R LL+F ++++E L P++++ ENV +L
Sbjct: 75 VIGGPPCQGFSTAGPRNFADP---------RNLLIFNYLNIVERLSPRWLIFENVEGLLT 125
Query: 505 FSGGF-LARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR 550
GG LAR V V M Y RL + +YG+PQ R RV + G R
Sbjct: 126 SGGGRDLARL-VREFVDMGYSVRLQKVNLAAYGVPQTRKRVLIIGNR 171
Score = 41.2 bits (95), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 739 VTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFG 777
+T P R +HP++ R LTIRE AR+Q FPD Y+ G
Sbjct: 313 LTITGPAAREFIHPTEHRPLTIRECARIQTFPDKYRWVG 351
>sp|P34882|MTAA_SYNP2 Modification methylase AquI subunit alpha OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6) GN=aquIMA PE=3
SV=1
Length = 248
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 78/174 (44%), Gaps = 26/174 (14%)
Query: 443 PGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDI 502
P ++D + GGPPCQ S + ++D + +L F+ V+ PK +MENV +
Sbjct: 70 PLEIDLVIGGPPCQSFS----LAGKRMGMDDPRGMLVLEFLRVVREALPKCFVMENVKGM 125
Query: 503 LKFSGGFLARYAVGRLVSM---------DYQTRLGIMAAGSYGLPQFRLRVFLWGARPFK 553
+ +S G A A+ S Y ++ A +G+PQFR RVF+ G R
Sbjct: 126 INWSKG-KALEAIMTEASQPIKYAGKEYKYAVSYHVLNAADFGVPQFRERVFIVGNR-LG 183
Query: 554 KLPQYPLPTHEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLPLVT 607
K Q+P PTH P+ I + QL+ + DAIS LP T
Sbjct: 184 KTFQFPEPTHG-------PSNQARQIDLFGK----QLKPYKTVQDAISTLPPAT 226
>sp|P50192|MTHA_HAEPH Modification methylase HphIA OS=Haemophilus parahaemolyticus
GN=hphIAM PE=3 SV=1
Length = 372
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
VD + GGPPCQG S + A +D +N F+ V++ +PK+ +MENV +
Sbjct: 113 VDVVIGGPPCQGFSMAGKIGRTFA--DDPRNHLFKEFVRVVKLTQPKFFVMENVARLFTH 170
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
+ G + + Y+ + ++ A +G+PQ R R+ G + ++ +P P+H
Sbjct: 171 NSGKTRAEITEQFERLGYKVKCKVLNAADFGVPQLRSRIVFIGRKDGGEI-TFPEPSH 227
>sp|P25282|MTG1_HAEGA Modification methylase HgaIA OS=Haemophilus gallinarum GN=hgaIAM
PE=3 SV=2
Length = 357
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 15/117 (12%)
Query: 440 LPLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENV 499
+ L VDF+ PPCQG+S + R+ D +N ++ + +I+ LKP Y+L+ENV
Sbjct: 68 IALTNQVDFLIASPPCQGMSVAGKNRDVSNMANDNRNYLIMYVIAMIKKLKPAYILIENV 127
Query: 500 VDILKFSGGFLARYAVGRLVSM----------DYQTRLGIMAAGSYGLPQFRLRVFL 546
+LK L Y +L + +Y I+ A YG PQ R R +
Sbjct: 128 PFLLK-----LELYIDNKLTPIKNILEDEFGSEYHIHFDILDAADYGTPQRRKRAII 179
>sp|P09795|MTS1_SALIN Modification methylase SinI OS=Salmonella infantis GN=sinIM PE=3
SV=1
Length = 461
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 33/153 (21%)
Query: 438 NILPLPG-----DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPK 492
+IL L G ++D I GGPPCQ S + + LED + + ++DV ++PK
Sbjct: 132 DILKLAGVSSGNEIDLIMGGPPCQAFSTAGK----RLGLEDERGNVFIKYLDVALDIRPK 187
Query: 493 YVLMENVVDILKF----------------------SGGFLARYAVGRLVSMDYQTRLGIM 530
Y+++ENV +L GG L Y + + S Y +
Sbjct: 188 YIVIENVRGLLSAPMKHRPHNERGEGLPPLKSEEQPGGVL-HYIIRIIKSAGYSVSFNLY 246
Query: 531 AAGSYGLPQFRLRVFLWGARPFKKLPQYPLPTH 563
+ ++G+PQ R RV + +R ++P + PTH
Sbjct: 247 NSANFGVPQIRERVIIICSRDGSRVP-FLQPTH 278
>sp|P34877|MTSA_LACLC Modification methylase ScrFIA OS=Lactococcus lactis subsp. cremoris
GN=scrFIAM PE=3 SV=1
Length = 389
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 18/150 (12%)
Query: 427 LKEFVTKGYRSNILPLP-GDV-----------DFICGGPPCQGVSGFNRFRNPQAALEDI 474
+ +F K Y++N P GD+ D + GG PCQ S + + +D
Sbjct: 109 IDKFAIKTYKANFGDEPHGDITKIDEKDIPDHDILVGGFPCQAFSQAGK----KLGFDDT 164
Query: 475 KNRQLLVFMDVIEYLKPKYVLMENVVDILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGS 534
+ +I+ +PK L+ENV ++ G + + L +DY+ + A
Sbjct: 165 RGTLFFEIARIIKEKRPKAFLLENVKNLKTHDKGRTFKTILNTLEELDYEVHTALFKARD 224
Query: 535 YGLPQFRLRVFLWG--ARPFKKLPQYPLPT 562
+GLPQ R R+++ G + + +PT
Sbjct: 225 FGLPQNRERIYIVGFDRKSISNYSDFQMPT 254
>sp|P29567|MTHT_METTF Modification methylase MthTI OS=Methanobacterium thermoformicicum
GN=mthTIM PE=3 SV=1
Length = 330
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 32/163 (19%)
Query: 442 LPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVD 501
+P V FI GGPPCQ S +D + + ++D+++ P + L ENV
Sbjct: 61 IPDVVGFI-GGPPCQSWS----LAGSMCGADDPRGKTFYAYVDLVKEKDPLFFLAENVPG 115
Query: 502 ILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLP 561
I+ + + V + + Y ++ A YG+PQ R RVF+ G R
Sbjct: 116 IVSRTHLPEFKRLVNSFIDIGYNVEYKVLNAKDYGVPQDRKRVFIVGYR----------- 164
Query: 562 THEIVARGVIPNEFQEIIVAYANNQPCQLEKGVLLSDAISDLP 604
+++ + + +P L K V L DAI DLP
Sbjct: 165 --------------EDLNLKFEFPKP--LNKKVTLRDAIGDLP 191
>sp|O34939|YDIO_BACSU Probable BsuMI modification methylase subunit YdiO OS=Bacillus
subtilis (strain 168) GN=ydiO PE=2 SV=1
Length = 427
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 6/113 (5%)
Query: 446 VDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKF 505
+DFI GPPCQG S N +D +N L+ VIE +P VL+ENV I+
Sbjct: 167 IDFILAGPPCQGHSDLNN----HTRRKDPRNALLMRVSRVIELFQPSSVLVENVPGIIHD 222
Query: 506 SGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR-PFKKLPQ 557
G + L + Y ++ A G+ Q R R F++ ++ P L Q
Sbjct: 223 KSGSFKEFK-NHLKTQGYYFDEIVLNAEKLGVSQARRRYFIFASKTPVSSLNQ 274
>sp|Q58600|MT52_METJA Probable modification methylase MJ1200 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1200 PE=3 SV=1
Length = 366
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Query: 446 VDFICGGPPCQGVSGFN--RFRNPQAAL-EDIKNRQLLVFMDVIEYLKPKYVLMENVVDI 502
VD I GGPPC+G +G N R +NP L +D R +L ++ ++ L+PK +MENV I
Sbjct: 124 VDVIIGGPPCEGYTGANPKREKNPYDRLYKDETGRLVLEYIRIVGDLQPKIFVMENVPGI 183
Query: 503 LKFSGGFLARYAVGRLVSMDYQ-TRLGIMAAGSYGLPQFRLRVFL 546
+ G + + + Y+ + A YG P R RVF+
Sbjct: 184 KEVRGAIIKEFR-----EIGYEDVYFNTLRAEDYGNPSVRRRVFV 223
Score = 38.5 bits (88), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 747 RILLHPSQDRVLTIRENARLQGFPDCYQLF 776
R +HP +DR+LT RE ARL +PD Y LF
Sbjct: 306 RFFIHPYEDRLLTPREQARLMSYPD-YHLF 334
>sp|Q3TYA6|MPP8_MOUSE M-phase phosphoprotein 8 OS=Mus musculus GN=Mphosph8 PE=1 SV=1
Length = 858
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 8/58 (13%)
Query: 377 FEVERLIAV-CYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTK 433
FEVER++ + C G N +KVRWKGY +DTWEP L CKE L EF K
Sbjct: 59 FEVERILDMKCEGGKN-------LYKVRWKGYTSEDDTWEPEVHLEDCKEVLLEFRKK 109
>sp|P08455|MTP2_NEIGO Modification methylase NgoPII OS=Neisseria gonorrhoeae GN=ngoPIIM
PE=3 SV=2
Length = 330
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 53/118 (44%), Gaps = 22/118 (18%)
Query: 442 LPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLK---PKYVLMEN 498
P ++D I GGPPCQ S AL I + + +F D I LK PK+ L EN
Sbjct: 60 FPEEIDGIIGGPPCQSWS-------EAGALRGIDDARGQLFFDYIRILKSKQPKFFLAEN 112
Query: 499 VVDILKFSGGFLARY--AVGRLVSM----DYQTRLGIMAAGSYGLPQFRLRVFLWGAR 550
V SG R+ AV L+ M Y L + A YG+ Q R RVF G R
Sbjct: 113 V------SGMLANRHNGAVQNLLKMFDGCGYDVTLTMANAKDYGVAQERKRVFYIGFR 164
>sp|Q99549|MPP8_HUMAN M-phase phosphoprotein 8 OS=Homo sapiens GN=MPHOSPH8 PE=1 SV=2
Length = 860
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Query: 377 FEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTK 433
FEVE+++ + KT+ V +KVRWKGY +DTWEP L CKE L EF K
Sbjct: 59 FEVEKILDM------KTEGGKVLYKVRWKGYTSDDDTWEPEIHLEDCKEVLLEFRKK 109
>sp|G3V8T1|MPP8_RAT M-phase phosphoprotein 8 OS=Rattus norvegicus GN=Mphosph8 PE=2 SV=1
Length = 851
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 8/58 (13%)
Query: 377 FEVERLIAV-CYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEFVTK 433
FEVER++ + C G N +KVRWKGY +DTWEP L CKE L EF K
Sbjct: 59 FEVERILDMKCEGGKN-------LYKVRWKGYTSDDDTWEPEVHLEDCKEVLLEFRKK 109
>sp|Q8N8U2|CDYL2_HUMAN Chromodomain Y-like protein 2 OS=Homo sapiens GN=CDYL2 PE=1 SV=2
Length = 506
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 377 FEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEF 430
+EVER++ D K KK + +RWKGYG +EDTWEP L C+E + EF
Sbjct: 7 YEVERIV-----DKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEF 55
>sp|P05102|MTH1_HAEPH Modification methylase HhaI OS=Haemophilus parahaemolyticus
GN=hhaIM PE=1 SV=1
Length = 327
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 46/117 (39%), Gaps = 4/117 (3%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
D D +C G PCQ S Q ED + ++ KPK V MENV +
Sbjct: 71 DHDILCAGFPCQAFS----ISGKQKGFEDSRGTLFFDIARIVREKKPKVVFMENVKNFAS 126
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLP 561
G + +DY ++ A YG+PQ R R+++ R + + P
Sbjct: 127 HDNGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRNDLNIQNFQFP 183
>sp|P06530|MTBR_BACIU Modification methylase BsuRI OS=Bacillus subtilis GN=hsdRM PE=3
SV=1
Length = 436
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Query: 447 DFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFS 506
+ I GG PC G S P+ ++D +N L F+ + +P+ + ENV ++
Sbjct: 149 NLILGGFPCPGFSE----AGPRL-IDDDRNFLYLHFIRSLIQAQPEIFVAENVKGMMTLG 203
Query: 507 GGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP-QYPLPTH 563
G + + S Y+ + ++ A YG+PQ R RV + G R +YP PTH
Sbjct: 204 KGEVLNQIIEDFASAGYRVQFKLLNARDYGVPQLRERVIIEGVRKDISFNYKYPSPTH 261
>sp|P17044|MTBF_BACIU Modification methylase BsuFI OS=Bacillus subtilis GN=hsdFM PE=3
SV=1
Length = 409
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 10/120 (8%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLK---PKYVLMENVVD 501
D D + G PCQ S + E + + + DV+ LK PK L+ENV
Sbjct: 160 DQDVLLAGFPCQPFSNIGK-------REGFAHERRNIIFDVLRILKKKQPKMFLLENVKG 212
Query: 502 ILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLP 561
+L G R + L S+ Y +M A ++GLPQ R R+ + G P + + P
Sbjct: 213 LLTNDNGNTFRVILDNLKSLGYSVFYEVMDAQNFGLPQRRERIVIVGFHPDLGINDFSFP 272
>sp|P16668|MTS3_STAAU Modification methylase Sau3AI OS=Staphylococcus aureus GN=sau3AIM
PE=3 SV=1
Length = 412
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 10/112 (8%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLK---PKYVLMENVVD 501
+ D I GG PCQ S R N + I+ ++ ++F +I Y++ PKY+L+ENV
Sbjct: 75 EADMIVGGFPCQDYS-VARSLNGELG---IQGKKGVLFWQIIRYIQNTFPKYLLLENVDR 130
Query: 502 ILKFSGGFLAR-YAV--GRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR 550
+LK R +AV L + Y ++ A YG Q R RVF++G +
Sbjct: 131 LLKSPSSQRGRDFAVMLSTLNELGYNVEWRVINAADYGNAQRRRRVFIFGYK 182
>sp|P09915|MTBR_BPRH1 Modification methylase Rho11sI OS=Bacillus phage rho11s PE=3 SV=2
Length = 503
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 445 DVDFICGGPPCQG--VSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDI 502
+ D + GG PCQ V+G+ + ED + ++D ++ +P+Y + ENV +
Sbjct: 68 EFDLLVGGSPCQSFSVAGYRK------GFEDTRGTLFFQYIDTLKEKQPRYFVFENVKGL 121
Query: 503 LKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR 550
+ G + Y+ L ++ + + +PQ R R+++ G R
Sbjct: 122 INHDKGNTLNIMAESFSEVGYRIDLELLNSKFFNVPQNRERIYIIGVR 169
>sp|P34906|MTF1_FUSNU Modification methylase FnuDI OS=Fusobacterium nucleatum GN=fnuDIM
PE=3 SV=1
Length = 344
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 4/115 (3%)
Query: 447 DFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFS 506
D I GGPPCQ S R + D + + ++ +++ ++PK+ L ENV +L
Sbjct: 63 DGIIGGPPCQSWSEAGSLR----GINDPRGKLFYEYIRILKDIQPKFFLAENVKGMLSKR 118
Query: 507 GGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPLP 561
+ + Y + ++ A YG+ Q R RVF G R + + P
Sbjct: 119 NTEAVKDIIKEFEEAGYNVFIKLLNAFDYGVAQDRERVFYVGFRKDLNISNFEFP 173
>sp|P25265|MTD2_HERAU Modification methylase HgiDII OS=Herpetosiphon aurantiacus
GN=hgiDIIM PE=3 SV=1
Length = 354
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 709 LVPDYAMKFEHQSSTKPFGRLWWDEIVNTVVTRAQPH-NRILLHPSQDRVLTIRENARLQ 767
L+ + K +S +GR+ WD++ T+ T+ + N HP QDR +++RE A LQ
Sbjct: 239 LIAECHKKESGESYGSVYGRMEWDKVAPTITTQCNGYGNGRFGHPEQDRAISLREAALLQ 298
Query: 768 GFPDCYQLFGP 778
FP YQ F P
Sbjct: 299 TFPRSYQ-FAP 308
Score = 40.8 bits (94), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 7/126 (5%)
Query: 448 FICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFSG 507
+ G PCQ S + + + K + L F +I ++P + MENV ++ F+
Sbjct: 72 ILVGCAPCQDFSQYTK-----KSRTGTKWQLLTEFSRLIREIEPDIISMENVPEVRTFNR 126
Query: 508 GFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARP--FKKLPQYPLPTHEI 565
G + + L + Y ++ YG+PQ R R+ L+ A+ K +P P +
Sbjct: 127 GEVFNNFIQSLEQLGYHVSHSVVHCPDYGIPQQRDRLVLFAAKQGVIKIIPPTHTPENYR 186
Query: 566 VARGVI 571
R VI
Sbjct: 187 TVRDVI 192
>sp|P34878|MTSB_LACLC Modification methylase ScrFIB OS=Lactococcus lactis subsp. cremoris
GN=scrFIBM PE=3 SV=1
Length = 360
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
D DF PCQ +S ++N A ++ L +IE+ KPKY++MENV +++
Sbjct: 117 DFDFFTYSFPCQDIS-VAGYQNGLVADSGTRSSLLWECCKIIEHKKPKYLMMENVKNLVG 175
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVF 545
+ + L S+ Y I+ A +G+PQ R RVF
Sbjct: 176 KNHKVNFNKFLLYLESLGYTNYWDILNARDFGIPQNRERVF 216
>sp|O33481|MTP1_PSYTA Modification methylase PspPI OS=Psychrobacter sp. (strain TA137)
GN=pspPIM PE=3 SV=1
Length = 416
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 10/151 (6%)
Query: 442 LPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVD 501
L G VD + GG PCQ S + Q ED++ + I+ +KPK L ENV
Sbjct: 136 LNGKVDLLTGGFPCQPFS----YAGKQLGFEDLRGTLVFEMARAIKEIKPKVFLAENVKG 191
Query: 502 ILKFSGGFLARYAVGRLVSMDYQT-RLGIMAAGSYGLPQFRLRVFLWGARP--FKKLP-Q 557
+ + GG + L + Y+ + A Y +PQ R R+ + G R + KL +
Sbjct: 192 LAENDGGRTLSIIIKVLEDLGYKILEKEVYKAIFYKVPQKRERLIIIGVRTDLYDKLAYE 251
Query: 558 YPLPTHEI--VARGVIPNEFQEIIVAYANNQ 586
P P +++ VA + E ++ V + Q
Sbjct: 252 KPSPYYKVLTVADALKAGELYDVDVPESTGQ 282
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 29/54 (53%)
Query: 728 RLWWDEIVNTVVTRAQPHNRILLHPSQDRVLTIRENARLQGFPDCYQLFGPVKE 781
RL WDE T+V HPS+ R LT RE AR+Q FPD ++ G V +
Sbjct: 329 RLSWDEPSLTLVCTPAQKQTERCHPSESRPLTTREYARIQTFPDDWEFKGSVGQ 382
>sp|Q59606|MTF7_NEIGO Modification methylase NgoFVII OS=Neisseria gonorrhoeae GN=ngoFVIIM
PE=3 SV=1
Length = 374
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 5/124 (4%)
Query: 441 PLPGDVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVV 500
P D D I GG PCQ S + Q LE + F+ + KPK + ENV
Sbjct: 74 PTIPDCDIILGGFPCQDFSMIWK----QPGLEGERGNLYKSFLRFVNAKKPKVFVAENVK 129
Query: 501 DILKFSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLP-QYP 559
+L + + + + Y + + +G+PQFR RV + G R ++P
Sbjct: 130 GLLTANKKKAIQQIITDFENCGYYVQANVYNFAEFGVPQFRERVLIVGVRLDTGFDFRHP 189
Query: 560 LPTH 563
PTH
Sbjct: 190 EPTH 193
>sp|P13906|MTB1_LYSSH Modification methylase BspRI OS=Lysinibacillus sphaericus GN=bspRIM
PE=1 SV=3
Length = 424
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 447 DFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILKFS 506
+ + GG PC G S P+ ++D +N + F+ + ++P+ + ENV ++
Sbjct: 148 NLVIGGFPCPGFSE----AGPRL-VDDERNFLYIHFIRCLMQVQPEIFVAENVKGMMTLG 202
Query: 507 GGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWGAR 550
GG + R V + Y+ ++ A YG+PQ R RV + G R
Sbjct: 203 GGEVFRQIVEDFGAAGYRVEARLLNARDYGVPQIRERVIIVGVR 246
>sp|P19888|MTBA_BACAR Modification methylase BanI OS=Bacillus aneurinolyticus GN=banIM
PE=1 SV=1
Length = 428
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 445 DVDFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLKPKYVLMENVVDILK 504
+ DF+ G PCQ S + Q D + V+ +PK L+ENV ++
Sbjct: 66 EFDFLLAGFPCQPFS----YAGKQQGFGDTRGTLFFEVERVLRDNRPKAFLLENVRGLVT 121
Query: 505 FSGGFLARYAVGRLVSMDYQTRLGIMAAGSYGLPQFRLRVFLWG 548
G + + +L + Y ++ + ++G+PQ R+R+++ G
Sbjct: 122 HDKGRTLKTIISKLEELGYGVSYLLLNSSTFGVPQNRVRIYILG 165
>sp|O55055|TRDMT_MOUSE tRNA (cytosine(38)-C(5))-methyltransferase OS=Mus musculus
GN=Trdmt1 PE=2 SV=2
Length = 415
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 61/141 (43%), Gaps = 25/141 (17%)
Query: 447 DFICGGPPCQGVSGFNRFRNPQAALEDIKNRQLLVFMDVIEYLK--PKYVLMENVVDILK 504
+ I PPCQ F R Q + D + L +D++ L+ PKY+L+ENV
Sbjct: 71 NMILMSPPCQP---FTRI-GLQGDMTDPRTTSFLYILDILPRLQKLPKYILLENV----- 121
Query: 505 FSGGFLARYAVGRLV----SMDYQTRLGIMAAGSYGLPQFRLRVFLWGARPFKKLPQYPL 560
GF G L+ + +Q + +++ S G+P RLR FL KL P
Sbjct: 122 --KGFEVSSTRGLLIQTIEACGFQYQEFLLSPSSLGIPNSRLRYFLIA-----KLQSEPF 174
Query: 561 PTHEIVARGVIPNEFQEIIVA 581
P A G I EF +I+
Sbjct: 175 PFQ---APGQILMEFPKIVTV 192
>sp|Q9Y232|CDYL1_HUMAN Chromodomain Y-like protein OS=Homo sapiens GN=CDYL PE=1 SV=2
Length = 598
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 377 FEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEF 430
+VER++ D K KK + VRWKGY +DTWEP + L C+E + +F
Sbjct: 61 LQVERIV-----DKRKNKKGKTEYLVRWKGYDSEDDTWEPEQHLVNCEEYIHDF 109
>sp|Q6AYK9|CDYL_RAT Chromodomain Y-like protein OS=Rattus norvegicus GN=Cdyl PE=2 SV=1
Length = 589
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 372 VPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEF 430
V + E +VE ++ D K KK + VRWKGY +DTWEP + L C+E + +F
Sbjct: 50 VQDAETQVESIV-----DKRKNKKGKTEYLVRWKGYDSEDDTWEPEQHLVNCEEYIHDF 103
>sp|Q9Y6F7|CDY2_HUMAN Testis-specific chromodomain protein Y 2 OS=Homo sapiens GN=CDY2A
PE=1 SV=1
Length = 541
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 372 VPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEF 430
+ ++EFEVE ++ D + K + VRWKGY +DTWEP + L C++ + +F
Sbjct: 1 MASQEFEVEAIV-----DKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDF 54
>sp|Q9Y6F8|CDY1_HUMAN Testis-specific chromodomain protein Y 1 OS=Homo sapiens GN=CDY1
PE=1 SV=1
Length = 540
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 372 VPNEEFEVERLIAVCYGDPNKTKKPGVYFKVRWKGYGPSEDTWEPIKGLSKCKEKLKEF 430
+ ++EFEVE ++ D + K + VRWKGY +DTWEP + L C++ + +F
Sbjct: 1 MASQEFEVEAIV-----DKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDF 54
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 308,038,683
Number of Sequences: 539616
Number of extensions: 14149307
Number of successful extensions: 130178
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 269
Number of HSP's that attempted gapping in prelim test: 114683
Number of HSP's gapped (non-prelim): 11611
length of query: 782
length of database: 191,569,459
effective HSP length: 126
effective length of query: 656
effective length of database: 123,577,843
effective search space: 81067065008
effective search space used: 81067065008
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)