Query 003975
Match_columns 782
No_of_seqs 465 out of 3263
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 10:07:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003975.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003975hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 4E-33 1.4E-37 293.9 28.4 248 24-312 5-273 (284)
2 2r83_A Synaptotagmin-1; C2A-C2 100.0 3E-32 1E-36 287.2 29.6 228 202-477 19-272 (284)
3 1dqv_A Synaptotagmin III; beta 100.0 6.4E-33 2.2E-37 293.6 20.1 250 24-313 6-277 (296)
4 1dqv_A Synaptotagmin III; beta 100.0 2.7E-32 9.1E-37 288.8 18.1 229 201-477 19-275 (296)
5 2ep6_A MCTP2 protein; beta san 99.8 2E-20 6.7E-25 172.9 13.6 126 32-165 5-131 (133)
6 2ep6_A MCTP2 protein; beta san 99.8 3.4E-20 1.2E-24 171.3 13.7 123 363-497 9-132 (133)
7 2fk9_A Protein kinase C, ETA t 99.8 8.4E-20 2.9E-24 171.7 15.0 117 364-495 26-155 (157)
8 3kwu_A MUNC13-1; calcium bindi 99.8 4.5E-19 1.5E-23 167.0 18.7 125 366-496 16-146 (148)
9 2dmh_A Myoferlin; beta-sandwic 99.8 2.9E-19 1E-23 166.6 16.6 124 365-498 5-134 (140)
10 1wfj_A Putative elicitor-respo 99.8 1.3E-19 4.4E-24 168.1 13.9 122 364-498 7-131 (136)
11 2dmh_A Myoferlin; beta-sandwic 99.8 3.1E-19 1.1E-23 166.4 16.5 123 38-167 5-134 (140)
12 3b7y_A E3 ubiquitin-protein li 99.8 5E-19 1.7E-23 167.7 17.5 129 36-165 16-152 (153)
13 3kwu_A MUNC13-1; calcium bindi 99.8 8.5E-19 2.9E-23 165.1 17.0 120 38-165 15-146 (148)
14 3m7f_B E3 ubiquitin-protein li 99.8 1.1E-18 3.6E-23 169.5 16.9 130 37-167 5-142 (176)
15 3b7y_A E3 ubiquitin-protein li 99.8 5.4E-19 1.8E-23 167.5 14.5 124 363-496 16-152 (153)
16 2fk9_A Protein kinase C, ETA t 99.8 3.7E-19 1.3E-23 167.3 12.2 121 35-165 24-156 (157)
17 1wfj_A Putative elicitor-respo 99.8 3.5E-19 1.2E-23 165.2 11.3 125 36-168 6-132 (136)
18 1gmi_A Protein kinase C, epsil 99.8 1.5E-18 5.2E-23 160.8 14.5 118 366-498 5-134 (136)
19 3m7f_B E3 ubiquitin-protein li 99.8 1.9E-18 6.5E-23 167.7 15.7 125 364-498 5-142 (176)
20 1rlw_A Phospholipase A2, CALB 99.8 2E-18 6.7E-23 157.8 13.2 116 366-494 2-122 (126)
21 2nq3_A Itchy homolog E3 ubiqui 99.8 1.8E-18 6.3E-23 166.5 13.3 128 38-167 34-162 (173)
22 1rlw_A Phospholipase A2, CALB 99.8 1.8E-18 6.1E-23 158.1 12.3 115 39-163 2-122 (126)
23 2b3r_A Phosphatidylinositol-4- 99.8 3.1E-18 1E-22 158.2 13.9 116 25-148 7-131 (134)
24 1gmi_A Protein kinase C, epsil 99.8 2E-18 7E-23 159.9 12.0 117 38-166 4-133 (136)
25 2d8k_A Synaptotagmin VII; exoc 99.8 9.1E-18 3.1E-22 156.6 15.8 119 326-478 10-136 (141)
26 1rsy_A Synaptotagmin I; calciu 99.8 7E-18 2.4E-22 159.5 14.0 118 326-477 26-150 (152)
27 3pyc_A E3 ubiquitin-protein li 99.7 1E-17 3.4E-22 154.4 14.2 120 39-164 4-131 (132)
28 2bwq_A Regulating synaptic mem 99.7 4.8E-18 1.6E-22 155.9 12.0 115 24-146 4-129 (129)
29 3f04_A Synaptotagmin-1; C2A, c 99.7 7.2E-18 2.5E-22 157.7 13.1 118 326-477 18-142 (143)
30 3fdw_A Synaptotagmin-like prot 99.7 2.7E-18 9.2E-23 161.6 10.2 123 325-480 6-137 (148)
31 2z0u_A WW domain-containing pr 99.7 3.9E-18 1.3E-22 161.2 10.7 116 327-476 28-154 (155)
32 2bwq_A Regulating synaptic mem 99.7 9.1E-18 3.1E-22 154.0 12.9 115 327-476 3-129 (129)
33 2d8k_A Synaptotagmin VII; exoc 99.7 9.8E-18 3.3E-22 156.4 13.3 120 24-150 12-138 (141)
34 3pyc_A E3 ubiquitin-protein li 99.7 1.7E-17 5.7E-22 153.0 14.2 122 367-495 5-131 (132)
35 1rsy_A Synaptotagmin I; calciu 99.7 1.2E-17 4.1E-22 157.9 13.5 118 24-148 28-151 (152)
36 1rh8_A Piccolo protein; beta-s 99.7 2.4E-18 8.1E-23 160.8 8.3 117 24-149 6-140 (142)
37 1v27_A Regulating synaptic mem 99.7 6.3E-18 2.2E-22 157.7 11.1 120 24-151 7-137 (141)
38 2z0u_A WW domain-containing pr 99.7 3.8E-18 1.3E-22 161.2 9.5 117 24-146 29-154 (155)
39 3f04_A Synaptotagmin-1; C2A, c 99.7 9.4E-18 3.2E-22 156.9 12.1 116 25-147 21-142 (143)
40 2dmg_A KIAA1228 protein; beta- 99.7 1.1E-17 3.9E-22 156.2 11.5 121 325-477 7-135 (142)
41 1v27_A Regulating synaptic mem 99.7 1.9E-17 6.4E-22 154.5 12.9 120 326-478 5-134 (141)
42 2nq3_A Itchy homolog E3 ubiqui 99.7 3.5E-17 1.2E-21 157.5 14.9 123 365-497 34-161 (173)
43 3fbk_A RGS3, RGP3, regulator o 99.7 2.1E-17 7.4E-22 156.3 13.1 117 326-477 11-137 (153)
44 3rdl_A Protein kinase C alpha 99.7 3.9E-17 1.3E-21 151.5 13.9 101 367-477 16-124 (137)
45 3fbk_A RGS3, RGP3, regulator o 99.7 1.8E-17 6.2E-22 156.8 11.7 119 24-150 13-140 (153)
46 1wfm_A Synaptotagmin XIII; C2 99.7 6.5E-17 2.2E-21 150.0 15.1 117 24-150 12-135 (138)
47 1tjx_A Similar to synaptotagmi 99.7 7.1E-17 2.4E-21 153.9 15.4 119 325-477 8-147 (159)
48 2b3r_A Phosphatidylinositol-4- 99.7 4.1E-17 1.4E-21 150.5 13.3 102 366-477 19-130 (134)
49 1ugk_A Synaptotagmin IV, KIAA1 99.7 6.5E-17 2.2E-21 150.2 14.6 120 326-478 6-134 (138)
50 3fdw_A Synaptotagmin-like prot 99.7 1.1E-17 3.9E-22 157.3 9.3 121 24-151 9-138 (148)
51 3n5a_A Synaptotagmin-7; calciu 99.7 6E-17 2.1E-21 150.4 13.8 115 328-476 2-137 (138)
52 1a25_A CALB, protein kinase C 99.7 7.5E-17 2.6E-21 151.9 14.3 101 367-477 31-139 (149)
53 2q3x_A Regulating synaptic mem 99.7 4.4E-17 1.5E-21 157.1 12.9 104 367-478 30-140 (171)
54 1wfm_A Synaptotagmin XIII; C2 99.7 1.2E-16 3.9E-21 148.4 15.0 115 326-477 10-132 (138)
55 3rdl_A Protein kinase C alpha 99.7 3.2E-17 1.1E-21 152.1 11.2 115 25-149 5-126 (137)
56 2chd_A Rabphilin-3A, exophilin 99.7 3.7E-17 1.3E-21 152.7 11.6 118 24-148 15-141 (142)
57 2chd_A Rabphilin-3A, exophilin 99.7 5.3E-17 1.8E-21 151.6 12.6 118 326-477 13-140 (142)
58 2enp_A B/K protein; C2 type 1, 99.7 4.8E-17 1.6E-21 152.9 11.7 121 326-477 10-141 (147)
59 1a25_A CALB, protein kinase C 99.7 5.9E-17 2E-21 152.6 12.3 114 25-148 20-140 (149)
60 2dmg_A KIAA1228 protein; beta- 99.7 3.5E-17 1.2E-21 152.8 10.3 120 24-151 10-139 (142)
61 1rh8_A Piccolo protein; beta-s 99.7 1.9E-17 6.4E-22 154.7 8.3 115 327-477 5-138 (142)
62 2q3x_A Regulating synaptic mem 99.7 4.6E-17 1.6E-21 156.9 11.1 115 25-149 19-141 (171)
63 2cm5_A Rabphilin-3A; protein t 99.7 1.8E-16 6.2E-21 152.2 15.2 118 326-477 21-159 (166)
64 1ugk_A Synaptotagmin IV, KIAA1 99.7 1.1E-16 3.6E-21 148.8 12.6 120 24-149 8-135 (138)
65 1tjx_A Similar to synaptotagmi 99.7 1.5E-16 5.2E-21 151.5 13.0 121 24-149 11-149 (159)
66 2cm5_A Rabphilin-3A; protein t 99.7 3.2E-16 1.1E-20 150.4 13.8 103 25-129 24-134 (166)
67 2enp_A B/K protein; C2 type 1, 99.7 1.3E-16 4.5E-21 149.8 11.0 119 24-149 12-143 (147)
68 1w15_A Synaptotagmin IV; metal 99.7 5.3E-16 1.8E-20 146.8 14.9 115 326-476 14-137 (153)
69 1w15_A Synaptotagmin IV; metal 99.7 2.4E-16 8.2E-21 149.1 12.5 102 24-127 16-125 (153)
70 3n5a_A Synaptotagmin-7; calciu 99.7 2.1E-16 7E-21 146.8 11.0 103 25-129 3-113 (138)
71 2cjt_A UNC-13 homolog A, MUNC1 99.6 2.3E-15 7.7E-20 137.9 11.9 115 366-495 4-130 (131)
72 2cjt_A UNC-13 homolog A, MUNC1 99.6 1.2E-15 4.3E-20 139.6 10.0 87 38-131 3-91 (131)
73 3l9b_A Otoferlin; C2-domain, b 99.6 2.4E-15 8.3E-20 135.0 11.4 116 41-167 22-141 (144)
74 3l9b_A Otoferlin; C2-domain, b 99.6 1E-14 3.5E-19 131.0 12.9 117 367-499 21-142 (144)
75 2cjs_A UNC-13 homolog A, MUNC1 99.6 7.1E-15 2.4E-19 140.2 11.5 120 38-165 12-140 (167)
76 2cjs_A UNC-13 homolog A, MUNC1 99.6 1.3E-14 4.4E-19 138.4 12.7 117 365-496 12-140 (167)
77 3nsj_A Perforin-1; pore formin 99.6 2E-14 6.9E-19 161.3 16.4 112 364-498 391-505 (540)
78 3jzy_A Intersectin 2; C2 domai 99.6 1.4E-14 4.7E-19 165.2 14.3 118 364-496 384-507 (510)
79 3jzy_A Intersectin 2; C2 domai 99.5 1.3E-14 4.6E-19 165.3 12.8 123 37-165 384-507 (510)
80 3nsj_A Perforin-1; pore formin 99.5 2.6E-14 8.7E-19 160.5 14.5 111 37-165 391-503 (540)
81 1djx_A PLC-D1, phosphoinositid 99.5 1.3E-13 4.3E-18 158.5 15.6 120 38-165 495-623 (624)
82 3bxj_A RAS GTPase-activating p 99.5 3.9E-15 1.3E-19 166.9 -0.4 122 365-499 9-159 (483)
83 1djx_A PLC-D1, phosphoinositid 99.4 4.5E-13 1.5E-17 153.9 15.2 119 365-495 495-622 (624)
84 1cjy_A CPLA2, protein (cytosol 99.4 1.4E-13 4.6E-18 159.2 10.2 107 37-148 15-127 (749)
85 1cjy_A CPLA2, protein (cytosol 99.4 4.1E-13 1.4E-17 155.2 9.7 104 364-477 15-126 (749)
86 3bxj_A RAS GTPase-activating p 99.3 3.2E-13 1.1E-17 151.4 -0.8 117 39-166 10-157 (483)
87 3ohm_B 1-phosphatidylinositol- 99.2 9.9E-11 3.4E-15 137.5 13.1 112 40-166 725-845 (885)
88 3qr0_A Phospholipase C-beta (P 99.2 1.6E-10 5.5E-15 135.0 14.6 113 39-166 649-771 (816)
89 3pfq_A PKC-B, PKC-beta, protei 99.1 6E-11 2E-15 139.2 9.8 105 39-149 171-282 (674)
90 3pfq_A PKC-B, PKC-beta, protei 99.1 1.3E-10 4.4E-15 136.4 12.0 101 367-477 172-280 (674)
91 2zkm_X 1-phosphatidylinositol- 99.1 2.9E-10 1E-14 133.7 13.9 112 38-164 676-797 (799)
92 3qr0_A Phospholipase C-beta (P 99.0 8.6E-10 3E-14 128.9 14.1 110 366-496 649-770 (816)
93 3ohm_B 1-phosphatidylinositol- 99.0 7.2E-10 2.4E-14 130.2 11.6 109 367-496 725-844 (885)
94 2zkm_X 1-phosphatidylinositol- 99.0 1.4E-09 4.8E-14 128.0 13.1 111 365-495 676-797 (799)
95 1yrk_A NPKC-delta, protein kin 98.9 5E-09 1.7E-13 91.1 11.0 114 40-165 6-124 (126)
96 1yrk_A NPKC-delta, protein kin 98.9 2.1E-08 7.3E-13 87.2 13.8 107 367-495 6-123 (126)
97 2enj_A NPKC-theta, protein kin 98.9 1.5E-08 5.1E-13 89.3 11.9 109 366-495 9-128 (138)
98 2enj_A NPKC-theta, protein kin 98.9 5.1E-09 1.7E-13 92.2 8.8 115 39-165 9-129 (138)
99 2yrb_A Protein fantom; beta sa 88.1 1.6 5.6E-05 39.6 8.1 129 33-166 11-150 (156)
100 3l4c_A Dedicator of cytokinesi 88.0 6.1 0.00021 38.1 12.5 40 73-112 78-119 (220)
101 2wxf_A Phosphatidylinositol-4, 84.0 4.2 0.00015 48.3 11.1 92 367-463 217-324 (940)
102 2yrb_A Protein fantom; beta sa 82.8 4.8 0.00016 36.5 8.5 125 364-497 15-150 (156)
103 3hhm_A Phosphatidylinositol-4, 80.7 5.3 0.00018 47.9 10.3 91 366-463 354-455 (1091)
104 2wxf_A Phosphatidylinositol-4, 79.8 5.5 0.00019 47.3 10.0 87 203-293 218-325 (940)
105 3l4c_A Dedicator of cytokinesi 72.1 11 0.00037 36.3 7.9 59 401-461 77-138 (220)
106 3hhm_A Phosphatidylinositol-4, 71.8 8.3 0.00028 46.2 8.6 88 203-293 356-456 (1091)
107 2y3a_A Phosphatidylinositol-4, 68.9 5.1 0.00018 48.2 6.0 93 366-463 352-470 (1092)
108 1e7u_A Phosphatidylinositol 3- 61.8 27 0.00093 41.6 10.3 70 41-111 219-296 (961)
109 2y3a_A Phosphatidylinositol-4, 61.7 6.4 0.00022 47.4 5.0 69 40-111 353-430 (1092)
110 1e7u_A Phosphatidylinositol 3- 61.3 20 0.00067 42.7 9.0 88 203-292 219-330 (961)
111 1gk7_A Vimentin; intermediate 28.3 41 0.0014 22.6 2.6 19 696-714 7-25 (39)
112 3hd7_A Vesicle-associated memb 24.0 1.3E+02 0.0044 24.3 5.5 38 686-723 34-71 (91)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=4e-33 Score=293.93 Aligned_cols=248 Identities=27% Similarity=0.396 Sum_probs=205.6
Q ss_pred cCCCceeeeeccccceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC---eEeeeccccCCCCCccccEEEEEecc--C
Q 003975 24 RGGDKTASTYDLVELMHYLCVNVVKARNLPVMDVSGSLDPYVEVKLGN---YKGITKHLEKNQNPVWNQIFAFSKER--L 98 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~---~~~kT~~i~~t~nP~Wne~f~f~~~~--~ 98 (782)
.|...+++.|+. ..+.|.|+|++|++|+.+|..|.+||||++++++ ++++|+++++|+||+|||+|.|.+.. .
T Consensus 5 ~G~l~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~ 82 (284)
T 2r83_A 5 LGKLQYSLDYDF--QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSEL 82 (284)
T ss_dssp CCEEEEEEEEET--TTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGC
T ss_pred eeEEEEEEEEEC--CCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHh
Confidence 456677777775 5689999999999999999999999999999964 57899999999999999999999863 3
Q ss_pred CCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCEEEEeccCCCC-cccceEEEEEEEecccCCccccccc
Q 003975 99 QSSLLEVTVKDKDIG-KDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKKGD-QTTKGEIMLAVWMGTQADESFAEAW 176 (782)
Q Consensus 99 ~~~~L~i~V~d~d~~-~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~g~-~~~~G~l~l~~~~~~~~d~~~~~~~ 176 (782)
....|.|+|||++.+ +|++||++.++|.++..+. ...+|++|....+. ....|+|.+++.|.+
T Consensus 83 ~~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~-----~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p---------- 147 (284)
T 2r83_A 83 AGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGH-----VTEEWRDLQSAEKEEQEKLGDICFSLRYVP---------- 147 (284)
T ss_dssp TTCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCSS-----CEEEEEECBCCSSCCCCCCCEEEEEEEEET----------
T ss_pred CcCEEEEEEEECCCCCCCceeEEEEEcchhcccCC-----cceeEEEeeccccccccccccEEEEEEecC----------
Confidence 467999999999988 8999999999999997653 36789999876532 235799999886652
Q ss_pred cCCccccccccccccccccccCCceEEEEEEEEEeecCCCCCCCCCCCcEEEEEEC--C---eEeeeecccCCCCCCccc
Q 003975 177 HSDAHNISQKNLANTRSKVYFSPKLYYLRVFVFEAQDLVPSDKGRAPDACVRIQLG--N---QLRVTRPSHVRSVNPVWN 251 (782)
Q Consensus 177 ~~~~~~~~~~~~~~~rs~~~~~p~~~~L~V~V~~a~~L~~~~~~~~~dpyv~v~l~--~---~~~~T~~~~~~t~nP~wn 251 (782)
..+.|.|+|++|++|+..+.++.+||||++++. + .+++|+++++ +.||.||
T Consensus 148 -----------------------~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wn 203 (284)
T 2r83_A 148 -----------------------TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKN-TLNPYYN 203 (284)
T ss_dssp -----------------------TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCS-CSSCEEE
T ss_pred -----------------------cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecC-CCCCEEc
Confidence 234699999999999999999999999999994 2 4678888886 9999999
Q ss_pred ceeEEEecCCC--CCeEEEEEEEccCCCCCceeEEEEEeCCCccccc-------CCCCCCCCceEEccCC
Q 003975 252 EEHMFVASEPF--EDLIIVTVEDRIRPGKDEILGRELIPVRNVPQRH-------ETTKLPDPRWFNLHKP 312 (782)
Q Consensus 252 e~f~f~v~~~~--~~~l~i~V~d~~~~~~d~~iG~~~i~l~~l~~~~-------~~~~~~~~~w~~L~~~ 312 (782)
|.|.|.+.... ...|.|+|||++..+++++||++.++++.+.... ...+....+||.|...
T Consensus 204 e~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 204 ESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp EEEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred eeEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 99999986543 4479999999999999999999999998743110 0234456799999865
No 2
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=3e-32 Score=287.22 Aligned_cols=228 Identities=25% Similarity=0.312 Sum_probs=190.4
Q ss_pred EEEEEEEEEeecCCCCCCCCCCCcEEEEEECC---eEeeeecccCCCCCCcccceeEEEecCC--CCCeEEEEEEEccCC
Q 003975 202 YYLRVFVFEAQDLVPSDKGRAPDACVRIQLGN---QLRVTRPSHVRSVNPVWNEEHMFVASEP--FEDLIIVTVEDRIRP 276 (782)
Q Consensus 202 ~~L~V~V~~a~~L~~~~~~~~~dpyv~v~l~~---~~~~T~~~~~~t~nP~wne~f~f~v~~~--~~~~l~i~V~d~~~~ 276 (782)
+.|+|+|++|++|+.++.++.+||||++++++ +.++|+++++ +.||.|||+|.|.+... ....|.|+|||++..
T Consensus 19 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~-~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~~ 97 (284)
T 2r83_A 19 NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRK-TLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRF 97 (284)
T ss_dssp TEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCS-CSSCEEEEEEEECCCGGGCTTCEEEEEEEECCSS
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccC-CCCCeeCceEEEEechHHhCcCEEEEEEEECCCC
Confidence 56999999999999999999999999999963 5788999987 99999999999998643 357999999999999
Q ss_pred CCCceeEEEEEeCCCcccccCCCCCCCCceEEccCCCcccccccccccccccceEEEEEEeccCccccCCCcccCCCCCc
Q 003975 277 GKDEILGRELIPVRNVPQRHETTKLPDPRWFNLHKPSLSAEEGAEKNKEKFSSKILISFCLEAGYHVFDESTHFSSDLQT 356 (782)
Q Consensus 277 ~~d~~iG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~g~~~~~~~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~ 356 (782)
+++++||++.++|.++.. ......|++|..... ......|.|.+.+.+
T Consensus 98 ~~~~~lG~~~i~l~~l~~-----~~~~~~w~~L~~~~~--------~~~~~~G~i~l~l~~------------------- 145 (284)
T 2r83_A 98 SKHDIIGEFKVPMNTVDF-----GHVTEEWRDLQSAEK--------EEQEKLGDICFSLRY------------------- 145 (284)
T ss_dssp SCCCEEEEEEEEGGGCCC-----SSCEEEEEECBCCSS--------CCCCCCCEEEEEEEE-------------------
T ss_pred CCCceeEEEEEcchhccc-----CCcceeEEEeecccc--------ccccccccEEEEEEe-------------------
Confidence 999999999999999873 234678999986531 012345888887765
Q ss_pred cccccccCceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEEC--C---EEEeecccCCCCCCeeccEEEEEeeCC---
Q 003975 357 SSKSLRKGSIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYG--N---KWIRTRTILDTLAPRWNEQYTWDVYDP--- 427 (782)
Q Consensus 357 ~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~--~---~~~rT~~~~~t~~P~wne~~~f~v~~~--- 427 (782)
.+..|.|.|.|++|+||+.+|.. |. ||||++++. + ...||+++++|+||+|||.|.|.+..+
T Consensus 146 ------~p~~~~l~v~v~~a~~L~~~d~~---~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~ 216 (284)
T 2r83_A 146 ------VPTAGKLTVVILEAKNLKKMDVG---GLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQ 216 (284)
T ss_dssp ------ETTTTEEEEEEEEEESCCCCSTT---SCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGG
T ss_pred ------cCcCCceEEEEEEeECCCCcCCC---CCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhC
Confidence 23357999999999999988643 66 999999983 3 468999999999999999999999754
Q ss_pred CceEEEEEEeCCcCCCCCCCCCCCccEEEEEEcccc------------cCCceEEEEEeeee
Q 003975 428 CTVITIGVFDNCYVNGSKDDAKDQRIGKVRIRLSTL------------ETDRIYTHYYPLLL 477 (782)
Q Consensus 428 ~~~l~i~v~d~~~~~~~~~~~~d~~lG~~~i~l~~l------------~~~~~~~~w~~L~~ 477 (782)
...|.|+|||++.++ +|++||++.|+++.+ ..+....+||+|..
T Consensus 217 ~~~l~i~V~d~d~~~------~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~ 272 (284)
T 2r83_A 217 KVQVVVTVLDYDKIG------KNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 272 (284)
T ss_dssp GEEEEEEEEECCSSS------CCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBC
T ss_pred ceEEEEEEEeCCCCC------CCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCC
Confidence 347999999999876 899999999999863 34567789999975
No 3
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=100.00 E-value=6.4e-33 Score=293.58 Aligned_cols=250 Identities=26% Similarity=0.337 Sum_probs=203.3
Q ss_pred cCCCceeeeeccccceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEE---CCeEeeeccccCCCCCccccEEEEEec--cC
Q 003975 24 RGGDKTASTYDLVELMHYLCVNVVKARNLPVMDVSGSLDPYVEVKL---GNYKGITKHLEKNQNPVWNQIFAFSKE--RL 98 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~---~~~~~kT~~i~~t~nP~Wne~f~f~~~--~~ 98 (782)
.|...+++.|+. ..+.|.|+|++|++|+.+|..|.+||||++++ ++++++|+++++|+||+|||+|.|.+. +.
T Consensus 6 ~G~l~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l 83 (296)
T 1dqv_A 6 CGRISFALRYLY--GSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAEL 83 (296)
T ss_dssp SCEEEEEEECCS--SSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGG
T ss_pred eeEEEEEEEEeC--CCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHh
Confidence 465666666665 56899999999999999999999999999999 457889999999999999999999985 33
Q ss_pred CCCeEEEEEEeCCCC-CCceeEEEEEE-ccccCCCCCCCCCCCCEEEEeccCCCCcccceEEEEEEEecccCCccccccc
Q 003975 99 QSSLLEVTVKDKDIG-KDDFVGRVSLD-LSQVPLRVPPDSPLAPQWYRLEDKKGDQTTKGEIMLAVWMGTQADESFAEAW 176 (782)
Q Consensus 99 ~~~~L~i~V~d~d~~-~d~~lG~~~v~-l~~l~~~~~~~~~~~~~w~~L~~~~g~~~~~G~l~l~~~~~~~~d~~~~~~~ 176 (782)
....|.|+|||+|.+ +|++||++.++ +.++.... .....|++|....+.....|+|.+++.|.+
T Consensus 84 ~~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~----~~~~~w~~L~~~~~~~~~~G~i~vsl~y~~---------- 149 (296)
T 1dqv_A 84 AQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQP----PDRPLWRDILEGGSEKADLGELNFSLCYLP---------- 149 (296)
T ss_dssp SSCCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSC----SSCCCCEECBCCSSCCSCCCEEEEEEEEET----------
T ss_pred cCCEEEEEEEEcCCCCCCceEEEEEeccccccccCC----ccceeeeccccccccccccceEEEEEEecc----------
Confidence 356899999999998 89999999995 55554321 125679999876544335799999987752
Q ss_pred cCCccccccccccccccccccCCceEEEEEEEEEeecCCCCCCCCCCCcEEEEEEC--C---eEeeeecccCCCCCCccc
Q 003975 177 HSDAHNISQKNLANTRSKVYFSPKLYYLRVFVFEAQDLVPSDKGRAPDACVRIQLG--N---QLRVTRPSHVRSVNPVWN 251 (782)
Q Consensus 177 ~~~~~~~~~~~~~~~rs~~~~~p~~~~L~V~V~~a~~L~~~~~~~~~dpyv~v~l~--~---~~~~T~~~~~~t~nP~wn 251 (782)
..+.|.|+|++|++|+.++.+|.+||||++++. + ++++|+++++ +.||.||
T Consensus 150 -----------------------~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wn 205 (296)
T 1dqv_A 150 -----------------------TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKN-TLNPTYN 205 (296)
T ss_dssp -----------------------TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCS-CSSCEEE
T ss_pred -----------------------ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecC-CCCCeEC
Confidence 235699999999999999999999999999996 2 5688999886 9999999
Q ss_pred ceeEEEecCCC--CCeEEEEEEEccCCCCCceeEEEEEeCCCccccc--------CCCCCCCCceEEccCCC
Q 003975 252 EEHMFVASEPF--EDLIIVTVEDRIRPGKDEILGRELIPVRNVPQRH--------ETTKLPDPRWFNLHKPS 313 (782)
Q Consensus 252 e~f~f~v~~~~--~~~l~i~V~d~~~~~~d~~iG~~~i~l~~l~~~~--------~~~~~~~~~w~~L~~~~ 313 (782)
|.|.|.+.... ...|.|+|||++..+++++||++.++++.+.... ...+....+|+.|....
T Consensus 206 e~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~~~ 277 (296)
T 1dqv_A 206 EALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVEEK 277 (296)
T ss_dssp ECCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBBCC
T ss_pred ceEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccCcc
Confidence 99999886542 4579999999999999999999999998764200 01345678899887653
No 4
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.98 E-value=2.7e-32 Score=288.83 Aligned_cols=229 Identities=22% Similarity=0.305 Sum_probs=187.3
Q ss_pred eEEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeEeeeecccCCCCCCcccceeEEEecCC--CCCeEEEEEEEccC
Q 003975 201 LYYLRVFVFEAQDLVPSDKGRAPDACVRIQL---GNQLRVTRPSHVRSVNPVWNEEHMFVASEP--FEDLIIVTVEDRIR 275 (782)
Q Consensus 201 ~~~L~V~V~~a~~L~~~~~~~~~dpyv~v~l---~~~~~~T~~~~~~t~nP~wne~f~f~v~~~--~~~~l~i~V~d~~~ 275 (782)
.+.|.|+|++|++|+.++.++.+||||++++ +.+.++|+++++ +.||.|||+|.|.+... ....|.|+|||++.
T Consensus 19 ~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~ 97 (296)
T 1dqv_A 19 SDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRK-TLNPIFNETFQFSVPLAELAQRKLHFSVYDFDR 97 (296)
T ss_dssp SCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCS-CSSCEEEEEEEEECCGGGGSSCCCEEEEEECCS
T ss_pred CCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCC-CCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCC
Confidence 3569999999999999999999999999999 567899999986 99999999999998543 24589999999999
Q ss_pred CCCCceeEEEEEe-CCCcccccCCCCCCCCceEEccCCCcccccccccccccccceEEEEEEeccCccccCCCcccCCCC
Q 003975 276 PGKDEILGRELIP-VRNVPQRHETTKLPDPRWFNLHKPSLSAEEGAEKNKEKFSSKILISFCLEAGYHVFDESTHFSSDL 354 (782)
Q Consensus 276 ~~~d~~iG~~~i~-l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~g~~~~~~~~~G~i~l~i~~~~~~~~~d~~~~~~~d~ 354 (782)
.+++++||++.++ +..+.. .......|+.|..... .....|.|.+.+++
T Consensus 98 ~~~~~~iG~~~i~~l~~~~~----~~~~~~~w~~L~~~~~---------~~~~~G~i~vsl~y----------------- 147 (296)
T 1dqv_A 98 FSRHDLIGQVVLDNLLELAE----QPPDRPLWRDILEGGS---------EKADLGELNFSLCY----------------- 147 (296)
T ss_dssp SSCCCEEEEEECCCTTGGGS----SCSSCCCCEECBCCSS---------CCSCCCEEEEEEEE-----------------
T ss_pred CCCCceEEEEEecccccccc----CCccceeeeccccccc---------cccccceEEEEEEe-----------------
Confidence 9999999999996 444442 2234678999976531 22346899888875
Q ss_pred CccccccccCceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEEC--C---EEEeecccCCCCCCeeccEEEEEeeCC-
Q 003975 355 QTSSKSLRKGSIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYG--N---KWIRTRTILDTLAPRWNEQYTWDVYDP- 427 (782)
Q Consensus 355 ~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~--~---~~~rT~~~~~t~~P~wne~~~f~v~~~- 427 (782)
.+..|.|+|.|++|+||+++|.. |. ||||++++. + .++||+++++++||+|||.|.|.+...
T Consensus 148 --------~~~~~~l~v~v~~a~~L~~~d~~---g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 216 (296)
T 1dqv_A 148 --------LPTAGLLTVTIIKASNLKAMDLT---GFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPES 216 (296)
T ss_dssp --------ETTTTEEEEEEEEEESCCCCSSS---SCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGG
T ss_pred --------ccccceeEEEEEEeecCCccCCC---CCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHH
Confidence 23458999999999999988643 66 999999995 3 568999999999999999999998754
Q ss_pred --CceEEEEEEeCCcCCCCCCCCCCCccEEEEEEccccc-------------CCceEEEEEeeee
Q 003975 428 --CTVITIGVFDNCYVNGSKDDAKDQRIGKVRIRLSTLE-------------TDRIYTHYYPLLL 477 (782)
Q Consensus 428 --~~~l~i~v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~-------------~~~~~~~w~~L~~ 477 (782)
...|.|+|||++.++ +|++||.+.|+++.+. .++...+|++|..
T Consensus 217 l~~~~L~i~V~d~d~~~------~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~ 275 (296)
T 1dqv_A 217 VENVGLSIAVVDYDCIG------HNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVE 275 (296)
T ss_dssp GGSCCCCCEEEECCSSS------CCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBB
T ss_pred ccCcEEEEEEEeCCCCC------CCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccC
Confidence 348999999999876 8999999999999763 2445566777764
No 5
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.83 E-value=2e-20 Score=172.91 Aligned_cols=126 Identities=36% Similarity=0.507 Sum_probs=112.2
Q ss_pred eeccccceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECCeEeeeccccCCCCCccccEEEEEeccCCCCeEEEEEEeCC
Q 003975 32 TYDLVELMHYLCVNVVKARNLPVMDVSGSLDPYVEVKLGNYKGITKHLEKNQNPVWNQIFAFSKERLQSSLLEVTVKDKD 111 (782)
Q Consensus 32 ~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~kT~~i~~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~d 111 (782)
..++.++.+.|.|+|++|++|+..|..|.+||||++++++++.+|+++++|.||+|||+|.|.+.+. ...|.|+|||++
T Consensus 5 s~~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~-~~~l~i~V~d~d 83 (133)
T 2ep6_A 5 SSGDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDI-HDVLEVTVFDED 83 (133)
T ss_dssp CCCSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCT-TCEEEEEEEEEE
T ss_pred cccccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCC-CCEEEEEEEECC
Confidence 3456788999999999999999999999999999999999999999999999999999999999864 578999999999
Q ss_pred CC-CCceeEEEEEEccccCCCCCCCCCCCCEEEEeccCCCCcccceEEEEEEEec
Q 003975 112 IG-KDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKKGDQTTKGEIMLAVWMG 165 (782)
Q Consensus 112 ~~-~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~g~~~~~G~l~l~~~~~ 165 (782)
.. +|++||++.+++.++..+ ..+|++|.+..+.....|+|++++.|.
T Consensus 84 ~~~~~~~lG~~~i~l~~l~~~-------~~~w~~L~~~~~~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 84 GDKPPDFLGKVAIPLLSIRDG-------QPNCYVLKNKDLEQAFKGVIYLEMDLI 131 (133)
T ss_dssp TTEEEEECCBCEEEGGGCCSS-------CCEECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred CCCCCCeeEEEEEEHHHccCC-------CceEEEeecCCCCCccceEEEEEEEEE
Confidence 98 899999999999999653 358999998765444689999998774
No 6
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.83 E-value=3.4e-20 Score=171.27 Aligned_cols=123 Identities=24% Similarity=0.437 Sum_probs=108.0
Q ss_pred cCceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEECCEEEeecccCCCCCCeeccEEEEEeeCCCceEEEEEEeCCcC
Q 003975 363 KGSIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYGNKWIRTRTILDTLAPRWNEQYTWDVYDPCTVITIGVFDNCYV 441 (782)
Q Consensus 363 ~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~~~~rT~~~~~t~~P~wne~~~f~v~~~~~~l~i~v~d~~~~ 441 (782)
.+..|.|+|+|++|+||++++.. |. ||||+++++++.+||+++++++||+|||.|.|.+.++...|.|+|||++.+
T Consensus 9 ~~~~~~L~v~v~~a~~L~~~d~~---g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~ 85 (133)
T 2ep6_A 9 VKDVGILQVKVLKAADLLAADFS---GKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGD 85 (133)
T ss_dssp CCCSEEEEEEEEEEESCCCSSSS---SCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETT
T ss_pred cCCceEEEEEEEeeECCCCCCCC---CCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCCC
Confidence 45679999999999999988643 66 999999999999999999999999999999999998888999999999987
Q ss_pred CCCCCCCCCCccEEEEEEcccccCCceEEEEEeeeecCCCCCCcCcEEEEEEEEEE
Q 003975 442 NGSKDDAKDQRIGKVRIRLSTLETDRIYTHYYPLLLLTPSGLKNNGELHLALRFTC 497 (782)
Q Consensus 442 ~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~g~~~~G~i~l~~~~~~ 497 (782)
+ +|++||++.|+|.++..+. .+||+|......+ ...|+|+|+++|.+
T Consensus 86 ~------~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~-~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 86 K------PPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQ-AFKGVIYLEMDLIY 132 (133)
T ss_dssp E------EEEECCBCEEEGGGCCSSC--CEECCCBCSCTTS-CCSSEEEEEEEEEE
T ss_pred C------CCCeeEEEEEEHHHccCCC--ceEEEeecCCCCC-ccceEEEEEEEEEe
Confidence 5 7999999999999998766 5899998644332 45799999998844
No 7
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.82 E-value=8.4e-20 Score=171.71 Aligned_cols=117 Identities=19% Similarity=0.248 Sum_probs=101.6
Q ss_pred CceeEEEEEEEEeecCCCCccCC-------CCCC-CcEEEEEECCEE-EeecccCCCCCCeeccEEEEEeeCCCceEEEE
Q 003975 364 GSIGTLELGILSAKNLMQMKSKD-------GKLT-DAYCVAKYGNKW-IRTRTILDTLAPRWNEQYTWDVYDPCTVITIG 434 (782)
Q Consensus 364 ~~~g~l~v~v~~a~~L~~~~~~~-------~~~~-dpyv~v~~~~~~-~rT~~~~~t~~P~wne~~~f~v~~~~~~l~i~ 434 (782)
...|.|+|+|++|+||+++|... +.|. ||||+|.++++. .||+++++|+||+|||.|.|.+.+. ..|.|+
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~~-~~L~~~ 104 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTDG-GHLELA 104 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCCC-CEEEEE
Confidence 56799999999999999887310 1255 999999998865 7999999999999999999999764 699999
Q ss_pred EEeCCcCCCCCCCCCCCccEEEEEEcccccCC----ceEEEEEeeeecCCCCCCcCcEEEEEEEE
Q 003975 435 VFDNCYVNGSKDDAKDQRIGKVRIRLSTLETD----RIYTHYYPLLLLTPSGLKNNGELHLALRF 495 (782)
Q Consensus 435 v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~----~~~~~w~~L~~~~~~g~~~~G~i~l~~~~ 495 (782)
|||++.++ +|++||++.|+|.++..+ ...+.||+|.. .|+|+|+++|
T Consensus 105 V~D~d~~~------~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~--------~G~i~l~l~~ 155 (157)
T 2fk9_A 105 VFHETPLG------YDHFVANCTLQFQELLRTTGASDTFEGWVDLEP--------EGKVFVVITL 155 (157)
T ss_dssp EEECCSSS------SCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS--------SCEEEEEEEE
T ss_pred EEECCCCC------CCCEEEEEEEEHHHhhcccCCCCcccEEEECCC--------CcEEEEEEEE
Confidence 99999876 899999999999999754 77899999963 5999999887
No 8
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.82 E-value=4.5e-19 Score=167.04 Aligned_cols=125 Identities=21% Similarity=0.327 Sum_probs=104.1
Q ss_pred eeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEECCEEEeecccCCCCCCeeccEEEEEeeCCCceEEEEEEeCCcCC--
Q 003975 366 IGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYGNKWIRTRTILDTLAPRWNEQYTWDVYDPCTVITIGVFDNCYVN-- 442 (782)
Q Consensus 366 ~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~~~~rT~~~~~t~~P~wne~~~f~v~~~~~~l~i~v~d~~~~~-- 442 (782)
.|.|+|+|++|+||+++|.. |. ||||++.++++.+||+++++++||.|||.|.|.+..+...|.|+|||++...
T Consensus 16 ~~~L~V~v~~a~~L~~~d~~---g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~~~ 92 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAKDKT---GSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDIKS 92 (148)
T ss_dssp CEEEEEEEEEEESCCCCSTT---SCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSHHH
T ss_pred ccEEEEEEEeeeCCCCCCCC---CCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCccc
Confidence 58999999999999988643 56 9999999999999999999999999999999999988889999999999740
Q ss_pred ---CCCCCCCCCccEEEEEEcccccCCceEEEEEeeeecCCCCCCcCcEEEEEEEEE
Q 003975 443 ---GSKDDAKDQRIGKVRIRLSTLETDRIYTHYYPLLLLTPSGLKNNGELHLALRFT 496 (782)
Q Consensus 443 ---~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~g~~~~G~i~l~~~~~ 496 (782)
.....++|++||++.|+|+++. ....+||+|...... ....|+|+|++.|+
T Consensus 93 ~~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~~~-~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 93 RVKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDKRTDK-SAVSGAIRLHISVE 146 (148)
T ss_dssp HHHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBCSSTT-CCCCCEEEEEEEEE
T ss_pred cccccccCCCCccEEEEEEEHHHCc--CCCCEEEEcccCCCC-CCCceEEEEEEEEE
Confidence 0000028999999999999993 456899999854332 23469999999875
No 9
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=2.9e-19 Score=166.61 Aligned_cols=124 Identities=23% Similarity=0.316 Sum_probs=106.1
Q ss_pred ceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEECCEEEeecccCCCCCCeeccEEEEEeeCC----CceEEEEEEeCC
Q 003975 365 SIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYGNKWIRTRTILDTLAPRWNEQYTWDVYDP----CTVITIGVFDNC 439 (782)
Q Consensus 365 ~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~~~~rT~~~~~t~~P~wne~~~f~v~~~----~~~l~i~v~d~~ 439 (782)
..|.|.|+|++|+||+.++ . +. ||||+++++++.+||+++++++||+|||.|.|.+..+ ...|.|+|||++
T Consensus 5 ~~g~L~v~v~~a~~L~~~~---~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d 80 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTK---F-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFE 80 (140)
T ss_dssp BCCEEEEEEEEEESCCCCS---S-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETT
T ss_pred CCcEEEEEEEEeeCCCCCC---C-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECC
Confidence 4589999999999999875 2 56 9999999999999999999999999999999999753 579999999999
Q ss_pred cCCCCCCCCCCCccEEEEEEcccccCCceEEEEEeeeec-CCCCCCcCcEEEEEEEEEEc
Q 003975 440 YVNGSKDDAKDQRIGKVRIRLSTLETDRIYTHYYPLLLL-TPSGLKNNGELHLALRFTCT 498 (782)
Q Consensus 440 ~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~-~~~g~~~~G~i~l~~~~~~~ 498 (782)
.++ +|++||++.|+|.++..+.....||+|... ...+....|+|+|++.|.+.
T Consensus 81 ~~~------~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 81 TIG------QNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDPP 134 (140)
T ss_dssp CSS------SCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECCC
T ss_pred CCC------CCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEECC
Confidence 876 899999999999999988888999993322 22333456999999998653
No 10
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.81 E-value=1.3e-19 Score=168.11 Aligned_cols=122 Identities=25% Similarity=0.363 Sum_probs=107.5
Q ss_pred CceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEECCEEEeecccC-CCCCCeeccEEEEEeeCCCceEEEEEEeCCcC
Q 003975 364 GSIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYGNKWIRTRTIL-DTLAPRWNEQYTWDVYDPCTVITIGVFDNCYV 441 (782)
Q Consensus 364 ~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~~~~rT~~~~-~t~~P~wne~~~f~v~~~~~~l~i~v~d~~~~ 441 (782)
.+.|.|+|+|++|+||+..+.. +. ||||+++++++.+||++++ ++.||+|||.|.|.+.+....|.|+|||++.+
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d~~---g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~ 83 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDADFL---NNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVG 83 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCCSS---CSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSC
T ss_pred CCcEEEEEEEEeccCCCCcccC---CCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCC
Confidence 4579999999999999988643 66 9999999999999999998 89999999999999998778999999999987
Q ss_pred CCCCCCCCCCccEEEEEEcccc-cCCceEEEEEeeeecCCCCCCcCcEEEEEEEEEEc
Q 003975 442 NGSKDDAKDQRIGKVRIRLSTL-ETDRIYTHYYPLLLLTPSGLKNNGELHLALRFTCT 498 (782)
Q Consensus 442 ~~~~~~~~d~~lG~~~i~l~~l-~~~~~~~~w~~L~~~~~~g~~~~G~i~l~~~~~~~ 498 (782)
+ +|++||++.|+|+++ ..+.....||+|.. +.+..|+|+|++.|.+.
T Consensus 84 ~------~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~----~~~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 84 T------EDDAVGEATIPLEPVFVEGSIPPTAYNVVK----DEEYKGEIWVALSFKPS 131 (136)
T ss_dssp T------TTCCSEEEEEESHHHHHHSEEEEEEEEEEE----TTEEEEEEEEEEEEEEC
T ss_pred C------CCceEEEEEEEHHHhccCCCCCcEEEEeec----CCccCEEEEEEEEEEeC
Confidence 6 899999999999999 55666789999982 23456999999999764
No 11
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=3.1e-19 Score=166.44 Aligned_cols=123 Identities=29% Similarity=0.402 Sum_probs=108.1
Q ss_pred ceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECCeEeeeccccCCCCCccccEEEEEeccC---CCCeEEEEEEeCCCC-
Q 003975 38 LMHYLCVNVVKARNLPVMDVSGSLDPYVEVKLGNYKGITKHLEKNQNPVWNQIFAFSKERL---QSSLLEVTVKDKDIG- 113 (782)
Q Consensus 38 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~kT~~i~~t~nP~Wne~f~f~~~~~---~~~~L~i~V~d~d~~- 113 (782)
..+.|.|+|++|++|+..|. |.+||||++++++++++|++++++.||+|||+|.|.+... ....|.|+|||++..
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~~ 83 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIG 83 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCSS
T ss_pred CCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCCC
Confidence 45799999999999999998 9999999999999999999999999999999999998643 468899999999998
Q ss_pred CCceeEEEEEEccccCCCCCCCCCCCCEEEE---eccCCCCcccceEEEEEEEeccc
Q 003975 114 KDDFVGRVSLDLSQVPLRVPPDSPLAPQWYR---LEDKKGDQTTKGEIMLAVWMGTQ 167 (782)
Q Consensus 114 ~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~---L~~~~g~~~~~G~l~l~~~~~~~ 167 (782)
+|++||++.++|.++..+. ....|++ |.+..+.. ..|+|.+++.|.+.
T Consensus 84 ~~~~lG~~~i~l~~l~~~~-----~~~~w~~l~~l~~~~~~~-~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 84 QNKLIGTATVALKDLTGDQ-----SRSLPYKLISLLNEKGQD-TGATIDLVIGYDPP 134 (140)
T ss_dssp SCCCCEEEEEEGGGTCSSS-----CEEEEEEEEEEECTTCCE-EEEEEEEEEEECCC
T ss_pred CCceEEEEEEEHHHhccCC-----CceeEEeeeeccCCCCCC-CCCEEEEEEEEECC
Confidence 8999999999999997653 2568988 77665543 57999999999864
No 12
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.81 E-value=5e-19 Score=167.69 Aligned_cols=129 Identities=28% Similarity=0.367 Sum_probs=103.4
Q ss_pred ccceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC------eEeeeccccCCCCCccccEEEEEeccCCCCeEEEEEEe
Q 003975 36 VELMHYLCVNVVKARNLPVMDVSGSLDPYVEVKLGN------YKGITKHLEKNQNPVWNQIFAFSKERLQSSLLEVTVKD 109 (782)
Q Consensus 36 ~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~------~~~kT~~i~~t~nP~Wne~f~f~~~~~~~~~L~i~V~d 109 (782)
.+..+.|.|+|++|++|+..|..|.+||||++++++ .+++|+++++|.||+|||+|.|.+... ...|.|+|||
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~l~~~V~d 94 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ-QHRLLFEVFD 94 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT-TCEEEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC-CCEEEEEEEE
Confidence 456789999999999999999899999999999974 578999999999999999999999763 5789999999
Q ss_pred CCCC-CCceeEEEEEEccccCCCCCCC-CCCCCEEEEeccCCCCcccceEEEEEEEec
Q 003975 110 KDIG-KDDFVGRVSLDLSQVPLRVPPD-SPLAPQWYRLEDKKGDQTTKGEIMLAVWMG 165 (782)
Q Consensus 110 ~d~~-~d~~lG~~~v~l~~l~~~~~~~-~~~~~~w~~L~~~~g~~~~~G~l~l~~~~~ 165 (782)
++.. +|++||++.++|.++....... .....+||+|....+.....|+|.+++.|.
T Consensus 95 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~ 152 (153)
T 3b7y_A 95 ENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYL 152 (153)
T ss_dssp CCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEEC
T ss_pred CCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEe
Confidence 9998 8999999999999998754321 233469999987654334689999999885
No 13
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.80 E-value=8.5e-19 Score=165.11 Aligned_cols=120 Identities=32% Similarity=0.525 Sum_probs=106.2
Q ss_pred ceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECCeEeeeccccCCCCCccccEEEEEeccCCCCeEEEEEEeCCC-----
Q 003975 38 LMHYLCVNVVKARNLPVMDVSGSLDPYVEVKLGNYKGITKHLEKNQNPVWNQIFAFSKERLQSSLLEVTVKDKDI----- 112 (782)
Q Consensus 38 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~kT~~i~~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~d~----- 112 (782)
..+.|.|+|++|++|+..|..|.+||||++++++++++|+++++|.||+|||+|.|.+... ...|.|+|||++.
T Consensus 15 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~-~~~l~~~v~d~d~~~~~~ 93 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNS-SDRIKVRVLDEDDDIKSR 93 (148)
T ss_dssp CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECST-TCEEEEEEEECCCSHHHH
T ss_pred cccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCC-CCEEEEEEEECCCCcccc
Confidence 3689999999999999999999999999999999999999999999999999999999764 4789999999997
Q ss_pred -------CCCceeEEEEEEccccCCCCCCCCCCCCEEEEeccCCCCcccceEEEEEEEec
Q 003975 113 -------GKDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKKGDQTTKGEIMLAVWMG 165 (782)
Q Consensus 113 -------~~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~g~~~~~G~l~l~~~~~ 165 (782)
.+|++||++.++|.++.. ...+||+|....+.....|+|.+++.|.
T Consensus 94 ~~~~~~~~~~~~lG~~~i~l~~l~~-------~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 94 VKQRFKRESDDFLGQTIIEVRTLSG-------EMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHTTTSSCSSEEEEEEEEEGGGCCS-------EEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred ccccccCCCCccEEEEEEEHHHCcC-------CCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 389999999999999932 2569999997655444689999999874
No 14
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.79 E-value=1.1e-18 Score=169.48 Aligned_cols=130 Identities=26% Similarity=0.375 Sum_probs=103.9
Q ss_pred cceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC------eEeeeccccCCCCCccccEEEEEeccCCCCeEEEEEEeC
Q 003975 37 ELMHYLCVNVVKARNLPVMDVSGSLDPYVEVKLGN------YKGITKHLEKNQNPVWNQIFAFSKERLQSSLLEVTVKDK 110 (782)
Q Consensus 37 ~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~------~~~kT~~i~~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~ 110 (782)
...|.|.|+|++|++|+..+..|.+||||+|++++ .+++|++++++.||+|||+|.|.+... ...|.|+|||+
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~-~~~L~~~V~d~ 83 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ-RHRILFEVFDE 83 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT-TCEEEEEEEEC
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC-CCEEEEEEEEC
Confidence 45789999999999999999999999999999975 578999999999999999999999753 57899999999
Q ss_pred CCC-CCceeEEEEEEccccCCCCCC-CCCCCCEEEEeccCCCCcccceEEEEEEEeccc
Q 003975 111 DIG-KDDFVGRVSLDLSQVPLRVPP-DSPLAPQWYRLEDKKGDQTTKGEIMLAVWMGTQ 167 (782)
Q Consensus 111 d~~-~d~~lG~~~v~l~~l~~~~~~-~~~~~~~w~~L~~~~g~~~~~G~l~l~~~~~~~ 167 (782)
+.+ +|++||++.++|.++...... +.....+||+|....+.....|+|.+++.|.+.
T Consensus 84 d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 84 NRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp C----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred CCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 998 999999999999999875432 122344899999865544468999999999875
No 15
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.79 E-value=5.4e-19 Score=167.50 Aligned_cols=124 Identities=20% Similarity=0.320 Sum_probs=100.7
Q ss_pred cCceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEECC------EEEeecccCCCCCCeeccEEEEEeeCCCceEEEEE
Q 003975 363 KGSIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYGN------KWIRTRTILDTLAPRWNEQYTWDVYDPCTVITIGV 435 (782)
Q Consensus 363 ~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~------~~~rT~~~~~t~~P~wne~~~f~v~~~~~~l~i~v 435 (782)
.+..|.|+|+|++|+||+.++.. |. ||||++++++ +.+||+++++++||+|||.|.|.+......|.|+|
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~---g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V 92 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDIL---GASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEV 92 (153)
T ss_dssp CTTCEEEEEEEEEEESCC----------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCCCCC---CCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEE
Confidence 34568999999999999987643 56 9999999963 57999999999999999999999988778999999
Q ss_pred EeCCcCCCCCCCCCCCccEEEEEEcccccCCce------EEEEEeeeecCCCCCCcCcEEEEEEEEE
Q 003975 436 FDNCYVNGSKDDAKDQRIGKVRIRLSTLETDRI------YTHYYPLLLLTPSGLKNNGELHLALRFT 496 (782)
Q Consensus 436 ~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~------~~~w~~L~~~~~~g~~~~G~i~l~~~~~ 496 (782)
||++.++ +|++||++.|+|.++..+.. ..+||+|.....+ .+..|+|+|++.|.
T Consensus 93 ~d~d~~~------~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~-~~~~G~i~l~l~~~ 152 (153)
T 3b7y_A 93 FDENRLT------RDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHK-SRVKGYLRLKMTYL 152 (153)
T ss_dssp EECCSSS------CCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTT-CCCCSEEEEEEEEC
T ss_pred EECCCCc------CCCeeEEEEEEHHHcccCCCcccccccccccccccccCC-CCcceEEEEEEEEe
Confidence 9999876 89999999999999976543 2589999864432 24569999999874
No 16
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.79 E-value=3.7e-19 Score=167.27 Aligned_cols=121 Identities=23% Similarity=0.360 Sum_probs=102.1
Q ss_pred cccceeEEEEEEEEeeCCCCCCC----------CCCCCcEEEEEECCeE-eeeccccCCCCCccccEEEEEeccCCCCeE
Q 003975 35 LVELMHYLCVNVVKARNLPVMDV----------SGSLDPYVEVKLGNYK-GITKHLEKNQNPVWNQIFAFSKERLQSSLL 103 (782)
Q Consensus 35 ~~~~~~~L~V~v~~a~~L~~~d~----------~g~~dPyv~v~~~~~~-~kT~~i~~t~nP~Wne~f~f~~~~~~~~~L 103 (782)
.+...|.|.|+|++|++|+++|. .|.+||||++++++++ .+|+++++|+||+|||+|.|.+.+ ...|
T Consensus 24 ~~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~--~~~L 101 (157)
T 2fk9_A 24 TMKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD--GGHL 101 (157)
T ss_dssp CCCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE--ECEE
T ss_pred hccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC--CCEE
Confidence 34567999999999999998873 3679999999999865 799999999999999999999975 4689
Q ss_pred EEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCEEEEeccCCCCcccceEEEEEEEec
Q 003975 104 EVTVKDKDIG-KDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKKGDQTTKGEIMLAVWMG 165 (782)
Q Consensus 104 ~i~V~d~d~~-~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~g~~~~~G~l~l~~~~~ 165 (782)
.|+|||+|.+ +|++||++.|++.++..+.+ +....+.||+|+. .|+|++.+.+.
T Consensus 102 ~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~-~~~~~~~W~~L~~-------~G~i~l~l~~~ 156 (157)
T 2fk9_A 102 ELAVFHETPLGYDHFVANCTLQFQELLRTTG-ASDTFEGWVDLEP-------EGKVFVVITLT 156 (157)
T ss_dssp EEEEEECCSSSSCEEEEEEEEEHHHHHHHHT-TCSEEEEEEECBS-------SCEEEEEEEEC
T ss_pred EEEEEECCCCCCCCEEEEEEEEHHHhhcccC-CCCcccEEEECCC-------CcEEEEEEEEE
Confidence 9999999988 89999999999999975410 1124679999974 58999988763
No 17
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.79 E-value=3.5e-19 Score=165.20 Aligned_cols=125 Identities=28% Similarity=0.437 Sum_probs=109.1
Q ss_pred ccceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECCeEeeecccc-CCCCCccccEEEEEeccCCCCeEEEEEEeCCCC-
Q 003975 36 VELMHYLCVNVVKARNLPVMDVSGSLDPYVEVKLGNYKGITKHLE-KNQNPVWNQIFAFSKERLQSSLLEVTVKDKDIG- 113 (782)
Q Consensus 36 ~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~kT~~i~-~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~d~~- 113 (782)
..+.+.|.|+|++|++|+..|..|.+||||++++++++.+|++++ ++.||+|||+|.|.+.+ ....|.|+|||++..
T Consensus 6 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d~~~~~ 84 (136)
T 1wfj_A 6 SGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFDKDVGT 84 (136)
T ss_dssp CCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECCSSSCT
T ss_pred CCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEECCCCC
Confidence 447799999999999999999899999999999999999999998 89999999999999987 578999999999988
Q ss_pred CCceeEEEEEEccccCCCCCCCCCCCCEEEEeccCCCCcccceEEEEEEEecccC
Q 003975 114 KDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKKGDQTTKGEIMLAVWMGTQA 168 (782)
Q Consensus 114 ~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~g~~~~~G~l~l~~~~~~~~ 168 (782)
+|++||++.++|.++.... ....+||+|. ..+. ..|+|.+++.|.+..
T Consensus 85 ~d~~lG~~~i~l~~l~~~~----~~~~~w~~L~-~~~~--~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 85 EDDAVGEATIPLEPVFVEG----SIPPTAYNVV-KDEE--YKGEIWVALSFKPSG 132 (136)
T ss_dssp TTCCSEEEEEESHHHHHHS----EEEEEEEEEE-ETTE--EEEEEEEEEEEEECC
T ss_pred CCceEEEEEEEHHHhccCC----CCCcEEEEee-cCCc--cCEEEEEEEEEEeCC
Confidence 8999999999999995421 1356899998 3333 589999999998653
No 18
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.78 E-value=1.5e-18 Score=160.80 Aligned_cols=118 Identities=19% Similarity=0.321 Sum_probs=101.0
Q ss_pred eeEEEEEEEEeecCCCCccCCC--------CC-CCcEEEEEECCEE-EeecccCCCCCCeeccEEEEEeeCCCceEEEEE
Q 003975 366 IGTLELGILSAKNLMQMKSKDG--------KL-TDAYCVAKYGNKW-IRTRTILDTLAPRWNEQYTWDVYDPCTVITIGV 435 (782)
Q Consensus 366 ~g~l~v~v~~a~~L~~~~~~~~--------~~-~dpyv~v~~~~~~-~rT~~~~~t~~P~wne~~~f~v~~~~~~l~i~v 435 (782)
.|.|+|+|++|+||+++|.... .+ +||||++++++.. .+|+++++|+||+|||.|.|.+.++ ..|.|+|
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~~V 83 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKIELAV 83 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEEEEE
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEEEEEE
Confidence 5899999999999998774211 12 4999999998865 7999999999999999999999876 8999999
Q ss_pred EeCCcCCCCCCCCCCCccEEEEEEcccccCC--ceEEEEEeeeecCCCCCCcCcEEEEEEEEEEc
Q 003975 436 FDNCYVNGSKDDAKDQRIGKVRIRLSTLETD--RIYTHYYPLLLLTPSGLKNNGELHLALRFTCT 498 (782)
Q Consensus 436 ~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~--~~~~~w~~L~~~~~~g~~~~G~i~l~~~~~~~ 498 (782)
||++.++ +|++||++.|+|+++..+ ...+.|++|.. .|+|+|+++|...
T Consensus 84 ~d~d~~~------~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~--------~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 84 FHDAPIG------YDDFVANCTIQFEELLQNGSRHFEDWIDLEP--------EGKVYVIIDLSGS 134 (136)
T ss_dssp EECCSSS------SCEEEEEEEEEHHHHTSTTCSEEEEEEECBS--------SCEEEEEEEEEEE
T ss_pred EeCCCCC------CCCEEEEEEEEHHHhcccCCCCccEEEEcCC--------CeEEEEEEEEEec
Confidence 9999876 899999999999999864 45689999863 5999999998653
No 19
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.78 E-value=1.9e-18 Score=167.66 Aligned_cols=125 Identities=21% Similarity=0.334 Sum_probs=98.9
Q ss_pred CceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEECC------EEEeecccCCCCCCeeccEEEEEeeCCCceEEEEEE
Q 003975 364 GSIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYGN------KWIRTRTILDTLAPRWNEQYTWDVYDPCTVITIGVF 436 (782)
Q Consensus 364 ~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~------~~~rT~~~~~t~~P~wne~~~f~v~~~~~~l~i~v~ 436 (782)
...|.|+|+|++|+||+.++.. |. ||||++++++ +.+||+++++++||.|||.|.|.+......|.|+||
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~---g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~ 81 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDIL---GASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVF 81 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CC---CCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEE
T ss_pred CCcEEEEEEEEEeeCCCCcCCC---CCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEE
Confidence 4568999999999999988643 66 9999999975 679999999999999999999999977789999999
Q ss_pred eCCcCCCCCCCCCCCccEEEEEEcccccCCceE-E-----EEEeeeecCCCCCCcCcEEEEEEEEEEc
Q 003975 437 DNCYVNGSKDDAKDQRIGKVRIRLSTLETDRIY-T-----HYYPLLLLTPSGLKNNGELHLALRFTCT 498 (782)
Q Consensus 437 d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~-~-----~w~~L~~~~~~g~~~~G~i~l~~~~~~~ 498 (782)
|++.++ +|++||++.|+|.++..+... . .||+|.....++ +..|+|+|++.|.+.
T Consensus 82 d~d~~~------~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~-~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 82 DENRLT------RDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKS-RVKGYLRLKMTYLPK 142 (176)
T ss_dssp ECC----------CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTC-CCCSEEEEEEEECC-
T ss_pred ECCCCC------CCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCC-ccCEEEEEEEEEEeC
Confidence 999876 899999999999999876443 2 799998654433 346999999998543
No 20
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.77 E-value=2e-18 Score=157.83 Aligned_cols=116 Identities=20% Similarity=0.269 Sum_probs=96.5
Q ss_pred eeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEECC---EEEeecccCCCCCCeeccEEEEEeeCC-CceEEEEEEeCCc
Q 003975 366 IGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYGN---KWIRTRTILDTLAPRWNEQYTWDVYDP-CTVITIGVFDNCY 440 (782)
Q Consensus 366 ~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~---~~~rT~~~~~t~~P~wne~~~f~v~~~-~~~l~i~v~d~~~ 440 (782)
.|.|.|+|++|+||++++..+..|. ||||++++++ +.+||+++++++||+|||.|.|.+..+ ...|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 4799999999999998521122356 9999999985 789999999999999999999999643 6799999999986
Q ss_pred CCCCCCCCCCCccEEEEEEcccccCCceEEEEEeeeecCCCCCCcCcEEEEEEE
Q 003975 441 VNGSKDDAKDQRIGKVRIRLSTLETDRIYTHYYPLLLLTPSGLKNNGELHLALR 494 (782)
Q Consensus 441 ~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~g~~~~G~i~l~~~ 494 (782)
+ +|++||++.|+|+++..+.....|++|.. ...|.|+++++
T Consensus 82 ~-------~~~~iG~~~i~l~~l~~~~~~~~~~~L~~------~~~g~i~~~le 122 (126)
T 1rlw_A 82 V-------MDETLGTATFTVSSMKVGEKKEVPFIFNQ------VTEMVLEMSLE 122 (126)
T ss_dssp S-------CCEEEEEEEEEGGGSCTTCEEEEEEEETT------TEEEEEEEEEE
T ss_pred C-------CCceeEEEEEEHHHccCCCcEEEEEEcCC------CceEEEEEEEE
Confidence 4 58899999999999999999999999963 22356666544
No 21
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.77 E-value=1.8e-18 Score=166.45 Aligned_cols=128 Identities=18% Similarity=0.149 Sum_probs=105.2
Q ss_pred ceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECCeEeeeccccCCCCCccccEEEEEeccCCCCeEEEEEEeCCCC-CCc
Q 003975 38 LMHYLCVNVVKARNLPVMDVSGSLDPYVEVKLGNYKGITKHLEKNQNPVWNQIFAFSKERLQSSLLEVTVKDKDIG-KDD 116 (782)
Q Consensus 38 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~kT~~i~~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~d~~-~d~ 116 (782)
..+.|.|+|++|++|+..+..+.+||||+|++++++++|+++++|+||+|||+|.|.+.. ...|.|+|||++.+ +|+
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~--~~~L~~~V~D~d~~~~dd 111 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRVWSHQTLKSDV 111 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEEEECCSSSCCE
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCC--CCEEEEEEEECCCCCCCc
Confidence 467899999999999944444559999999999999999999999999999999999864 78899999999998 999
Q ss_pred eeEEEEEEccccCCCCCCCCCCCCEEEEeccCCCCcccceEEEEEEEeccc
Q 003975 117 FVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKKGDQTTKGEIMLAVWMGTQ 167 (782)
Q Consensus 117 ~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~g~~~~~G~l~l~~~~~~~ 167 (782)
+||++.++|.++.............|++|....+.....|+|.+++.+...
T Consensus 112 ~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 112 LLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQL 162 (173)
T ss_dssp EEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEEC
T ss_pred eEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeeec
Confidence 999999999999754322111236799999875433468999999987643
No 22
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.77 E-value=1.8e-18 Score=158.09 Aligned_cols=115 Identities=24% Similarity=0.401 Sum_probs=99.4
Q ss_pred eeEEEEEEEEeeCCCCC---CCCCCCCcEEEEEECC---eEeeeccccCCCCCccccEEEEEeccCCCCeEEEEEEeCCC
Q 003975 39 MHYLCVNVVKARNLPVM---DVSGSLDPYVEVKLGN---YKGITKHLEKNQNPVWNQIFAFSKERLQSSLLEVTVKDKDI 112 (782)
Q Consensus 39 ~~~L~V~v~~a~~L~~~---d~~g~~dPyv~v~~~~---~~~kT~~i~~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~d~ 112 (782)
.+.|.|+|++|++|+.+ |..|.+||||++++++ ++++|+++++|.||+|||+|.|.+.......|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 47899999999999984 5678999999999986 68899999999999999999999976567899999999998
Q ss_pred CCCceeEEEEEEccccCCCCCCCCCCCCEEEEeccCCCCcccceEEEEEEE
Q 003975 113 GKDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKKGDQTTKGEIMLAVW 163 (782)
Q Consensus 113 ~~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~g~~~~~G~l~l~~~ 163 (782)
.+|++||++.++|.++..+. ....|++|.+. ..|+|.+++.
T Consensus 82 ~~~~~iG~~~i~l~~l~~~~-----~~~~~~~L~~~-----~~g~i~~~le 122 (126)
T 1rlw_A 82 VMDETLGTATFTVSSMKVGE-----KKEVPFIFNQV-----TEMVLEMSLE 122 (126)
T ss_dssp SCCEEEEEEEEEGGGSCTTC-----EEEEEEEETTT-----EEEEEEEEEE
T ss_pred CCCceeEEEEEEHHHccCCC-----cEEEEEEcCCC-----ceEEEEEEEE
Confidence 88999999999999997643 36789999862 2577777764
No 23
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.77 E-value=3.1e-18 Score=158.16 Aligned_cols=116 Identities=23% Similarity=0.382 Sum_probs=98.9
Q ss_pred CCCceeeeeccccceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEE-----CCeEeeeccccCCCCCccccEEEEE-ec--
Q 003975 25 GGDKTASTYDLVELMHYLCVNVVKARNLPVMDVSGSLDPYVEVKL-----GNYKGITKHLEKNQNPVWNQIFAFS-KE-- 96 (782)
Q Consensus 25 ~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~-----~~~~~kT~~i~~t~nP~Wne~f~f~-~~-- 96 (782)
|+..+.+.|++ ..+.|.|+|++|++|+. +..|.+||||++++ +..+++|+++++|.||+|||+|.|. +.
T Consensus 7 ~~~~~~~~~~~--~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~ 83 (134)
T 2b3r_A 7 GSGAVKLSVSY--RNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKE 83 (134)
T ss_dssp CCCEEEEEEEE--ETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHH
T ss_pred ccEEEEEEEee--cCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHH
Confidence 45566777777 56899999999999997 77899999999999 3467899999999999999999999 65
Q ss_pred cCCCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCEEEEeccC
Q 003975 97 RLQSSLLEVTVKDKDIG-KDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDK 148 (782)
Q Consensus 97 ~~~~~~L~i~V~d~d~~-~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~ 148 (782)
++....|.|+|||++.. ++++||++.++|.++..+. ...+||+|.+.
T Consensus 84 ~l~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~-----~~~~W~~L~~~ 131 (134)
T 2b3r_A 84 TLRQRELQLSVLSAESLRENFFLGGITLPLKDFNLSK-----ETVKWYQLTAA 131 (134)
T ss_dssp HHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGSCTTS-----CEEEEEECBC-
T ss_pred HhCcCEEEEEEEECCCCCCCcEEEEEEEEhhhccCCC-----CcceeEECCCc
Confidence 33567999999999998 8999999999999997643 36799999874
No 24
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.76 E-value=2e-18 Score=159.91 Aligned_cols=117 Identities=21% Similarity=0.344 Sum_probs=100.2
Q ss_pred ceeEEEEEEEEeeCCCCCCCCCC-----------CCcEEEEEECCeE-eeeccccCCCCCccccEEEEEeccCCCCeEEE
Q 003975 38 LMHYLCVNVVKARNLPVMDVSGS-----------LDPYVEVKLGNYK-GITKHLEKNQNPVWNQIFAFSKERLQSSLLEV 105 (782)
Q Consensus 38 ~~~~L~V~v~~a~~L~~~d~~g~-----------~dPyv~v~~~~~~-~kT~~i~~t~nP~Wne~f~f~~~~~~~~~L~i 105 (782)
..|.|.|+|++|++|++.|..+. +||||++.++++. .+|+++.+|.||+|||+|.|.+.+. ..|.|
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L~~ 81 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG--RKIEL 81 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE--CEEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC--CEEEE
Confidence 35899999999999998875443 9999999998864 7999999999999999999999764 78999
Q ss_pred EEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCEEEEeccCCCCcccceEEEEEEEecc
Q 003975 106 TVKDKDIG-KDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKKGDQTTKGEIMLAVWMGT 166 (782)
Q Consensus 106 ~V~d~d~~-~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~g~~~~~G~l~l~~~~~~ 166 (782)
+|||+|.. +|++||++.+++.++..+.. .....|++|+. .|+|++.+.|.+
T Consensus 82 ~V~d~d~~~~dd~iG~~~i~l~~l~~~~~---~~~~~w~~L~~-------~G~i~l~l~~~~ 133 (136)
T 1gmi_A 82 AVFHDAPIGYDDFVANCTIQFEELLQNGS---RHFEDWIDLEP-------EGKVYVIIDLSG 133 (136)
T ss_dssp EEEECCSSSSCEEEEEEEEEHHHHTSTTC---SEEEEEEECBS-------SCEEEEEEEEEE
T ss_pred EEEeCCCCCCCCEEEEEEEEHHHhcccCC---CCccEEEEcCC-------CeEEEEEEEEEe
Confidence 99999988 89999999999999987532 12478999864 689999998864
No 25
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=9.1e-18 Score=156.60 Aligned_cols=119 Identities=20% Similarity=0.284 Sum_probs=102.4
Q ss_pred cccceEEEEEEeccCccccCCCcccCCCCCccccccccCceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEEC---CE
Q 003975 326 KFSSKILISFCLEAGYHVFDESTHFSSDLQTSSKSLRKGSIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYG---NK 401 (782)
Q Consensus 326 ~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~---~~ 401 (782)
...|+|.+++.+. +..+.|+|+|++|+||+.++.. +. ||||++++. .+
T Consensus 10 ~~~G~l~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~d~~---g~~dpyv~v~~~~~~~~ 61 (141)
T 2d8k_A 10 ENLGRIQFSVGYN-------------------------FQESTLTVKIMKAQELPAKDFS---GTSDPFVKIYLLPDKKH 61 (141)
T ss_dssp CCCCEEEEEEEEC-------------------------SSSCCEEEEEEEEESCCCCSSS---SCCCEEEEEEEESCCSS
T ss_pred ceeeEEEEEEEEe-------------------------CCCCEEEEEEEEeECCCCCCCC---CCCCcEEEEEEECCCCc
Confidence 3469999998862 3357999999999999988643 66 999999993 46
Q ss_pred EEeecccCCCCCCeeccEEEEEeeC----CCceEEEEEEeCCcCCCCCCCCCCCccEEEEEEcccccCCceEEEEEeeee
Q 003975 402 WIRTRTILDTLAPRWNEQYTWDVYD----PCTVITIGVFDNCYVNGSKDDAKDQRIGKVRIRLSTLETDRIYTHYYPLLL 477 (782)
Q Consensus 402 ~~rT~~~~~t~~P~wne~~~f~v~~----~~~~l~i~v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~ 477 (782)
.+||++++++.||+|||.|.|.+.. ....|.|+|||++.++ +|++||++.|+|.++..+.....||+|..
T Consensus 62 ~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~------~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 135 (141)
T 2d8k_A 62 KLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDRFS------RNDPIGEVSIPLNKVDLTQMQTFWKDLKP 135 (141)
T ss_dssp EEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCSSS------SCEEEEEEEEETTTSCTTSCEEEEECCEE
T ss_pred cEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCCCC------CCcEEEEEEEEhhhhcCCCCccEEEECcC
Confidence 8999999999999999999998643 2578999999999876 89999999999999998888899999986
Q ss_pred c
Q 003975 478 L 478 (782)
Q Consensus 478 ~ 478 (782)
.
T Consensus 136 ~ 136 (141)
T 2d8k_A 136 S 136 (141)
T ss_dssp C
T ss_pred C
Confidence 3
No 26
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.75 E-value=7e-18 Score=159.52 Aligned_cols=118 Identities=23% Similarity=0.286 Sum_probs=102.2
Q ss_pred cccceEEEEEEeccCccccCCCcccCCCCCccccccccCceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEE---CCE
Q 003975 326 KFSSKILISFCLEAGYHVFDESTHFSSDLQTSSKSLRKGSIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKY---GNK 401 (782)
Q Consensus 326 ~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~---~~~ 401 (782)
...|+|.+++.+. +..+.|+|+|++|+||+.++.. +. ||||++++ +.+
T Consensus 26 ~~~G~l~~~l~y~-------------------------~~~~~L~V~v~~a~~L~~~d~~---g~~dpyv~v~~~~~~~~ 77 (152)
T 1rsy_A 26 EKLGKLQYSLDYD-------------------------FQNNQLLVGIIQAAELPALDMG---GTSDPYVKVFLLPDKKK 77 (152)
T ss_dssp CCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCCSTT---SCCCEEEEEEEETTCCS
T ss_pred CCceEEEEEEEEe-------------------------CCCCEEEEEEEEeECCCCccCC---CCcCeEEEEEEEcCCCc
Confidence 3468999998763 3347999999999999988643 66 99999999 456
Q ss_pred EEeecccCCCCCCeeccEEEEEeeC---CCceEEEEEEeCCcCCCCCCCCCCCccEEEEEEcccccCCceEEEEEeeee
Q 003975 402 WIRTRTILDTLAPRWNEQYTWDVYD---PCTVITIGVFDNCYVNGSKDDAKDQRIGKVRIRLSTLETDRIYTHYYPLLL 477 (782)
Q Consensus 402 ~~rT~~~~~t~~P~wne~~~f~v~~---~~~~l~i~v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~ 477 (782)
.+||+++++++||+|||.|.|.+.. ....|.|+|||++.++ +|++||++.|+|+++..+....+||+|..
T Consensus 78 ~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~------~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 78 KFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFS------KHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp CEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSSS------CCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred eEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCCCC------CCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 7999999999999999999998864 2579999999999876 89999999999999998888999999974
No 27
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.75 E-value=1e-17 Score=154.44 Aligned_cols=120 Identities=18% Similarity=0.258 Sum_probs=100.7
Q ss_pred eeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC--eEeeeccccCCCCCccccEEEEEeccCCCCeEEEEEEeCCCC-C-
Q 003975 39 MHYLCVNVVKARNLPVMDVSGSLDPYVEVKLGN--YKGITKHLEKNQNPVWNQIFAFSKERLQSSLLEVTVKDKDIG-K- 114 (782)
Q Consensus 39 ~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~--~~~kT~~i~~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~d~~-~- 114 (782)
...|.|+|++|++|+..|..|.+||||++++++ ++++|+++++|+||+|||+|.|.+... ..|.|+|||++.. +
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~l~~~v~d~d~~~~~ 81 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT--DSITISVWNHKKIHKK 81 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT--CCEEEEEEEGGGTTSS
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC--CEEEEEEEECCCCCCC
Confidence 467999999999999999999999999999975 789999999999999999999999764 3499999999987 4
Q ss_pred --CceeEEEEEEccccCCCCCCCCCCCCEEEEeccCCCC--cccceEEEEEEEe
Q 003975 115 --DDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKKGD--QTTKGEIMLAVWM 164 (782)
Q Consensus 115 --d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~g~--~~~~G~l~l~~~~ 164 (782)
|++||++.+++.++..... ...+|++|....+. ....|+|.+++..
T Consensus 82 ~~d~~lG~~~i~l~~l~~~~~----~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 82 QGAGFLGCVRLLSNAISRLKD----TGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp TTTTEEEEEEECHHHHHHHTT----SCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CCCCceEEEEEeHHHhhcccc----cCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 8999999999998843221 14589999876432 2368999998854
No 28
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.75 E-value=4.8e-18 Score=155.91 Aligned_cols=115 Identities=29% Similarity=0.550 Sum_probs=95.2
Q ss_pred cCCCceeeeeccccceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEE-----CCeEeeeccccCCCCCccccEEEEEec--
Q 003975 24 RGGDKTASTYDLVELMHYLCVNVVKARNLPVMDVSGSLDPYVEVKL-----GNYKGITKHLEKNQNPVWNQIFAFSKE-- 96 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~-----~~~~~kT~~i~~t~nP~Wne~f~f~~~-- 96 (782)
.|...++..|+. ..+.|.|+|++|++|+..|..|.+||||++++ +..+++|+++++|.||+|||+|.|.+.
T Consensus 4 ~G~l~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~ 81 (129)
T 2bwq_A 4 SGQLSIKLWFDK--VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHR 81 (129)
T ss_dssp CCEEEEEEEEET--TTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCG
T ss_pred eEEEEEEEEEcc--CCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCH
Confidence 455667777665 56899999999999999999999999999999 346899999999999999999999952
Q ss_pred -cCCCCeEEEEEEeCCCC-C--CceeEEEEEEccccCCCCCCCCCCCCEEEEec
Q 003975 97 -RLQSSLLEVTVKDKDIG-K--DDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLE 146 (782)
Q Consensus 97 -~~~~~~L~i~V~d~d~~-~--d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~ 146 (782)
+.....|.|+|||++.. + +++||++.++|.++.... .++||+|+
T Consensus 82 ~~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~------~~~W~~Lq 129 (129)
T 2bwq_A 82 REFRERMLEITLWDQARVREEESEFLGEILIELETALLDD------EPHWYKLQ 129 (129)
T ss_dssp GGGGGCEEEEEEEEC-------CEEEEEEEEEGGGCCCSS------CEEEEECC
T ss_pred HHhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCc------CCccEECc
Confidence 33467899999999988 5 999999999999997642 67999985
No 29
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.75 E-value=7.2e-18 Score=157.72 Aligned_cols=118 Identities=23% Similarity=0.291 Sum_probs=102.8
Q ss_pred cccceEEEEEEeccCccccCCCcccCCCCCccccccccCceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEE---CCE
Q 003975 326 KFSSKILISFCLEAGYHVFDESTHFSSDLQTSSKSLRKGSIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKY---GNK 401 (782)
Q Consensus 326 ~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~---~~~ 401 (782)
...|+|.+++++. +..+.|.|+|++|+||+.++.. +. ||||++++ +.+
T Consensus 18 ~~~G~l~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~d~~---g~~dpyv~v~l~~~~~~ 69 (143)
T 3f04_A 18 EKLGKLQYSLDYD-------------------------FQNNQLLVGIIQAAELPALDMG---GTSDPYVKVFLLPDKKK 69 (143)
T ss_dssp CCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEECCCCBGGG---BCCCEEEEEEEESCCSC
T ss_pred cCeEEEEEEEEEe-------------------------CCCCEEEEEEEEecCCCCCCCC---CCcCcEEEEEEECCCCc
Confidence 4569999998863 3457999999999999988643 56 99999999 456
Q ss_pred EEeecccCCCCCCeeccEEEEEeeCC---CceEEEEEEeCCcCCCCCCCCCCCccEEEEEEcccccCCceEEEEEeeee
Q 003975 402 WIRTRTILDTLAPRWNEQYTWDVYDP---CTVITIGVFDNCYVNGSKDDAKDQRIGKVRIRLSTLETDRIYTHYYPLLL 477 (782)
Q Consensus 402 ~~rT~~~~~t~~P~wne~~~f~v~~~---~~~l~i~v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~ 477 (782)
.+||+++++|.||+|||.|.|.+... ...|.|+|||++.++ +|++||++.|+|+++..+....+||+|..
T Consensus 70 ~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~------~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 70 KFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFS------KHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp CEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSSS------CCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred cEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCCCC------CCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 89999999999999999999998643 479999999999876 89999999999999999988999999974
No 30
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.75 E-value=2.7e-18 Score=161.64 Aligned_cols=123 Identities=15% Similarity=0.241 Sum_probs=102.7
Q ss_pred ccccceEEEEEEeccCccccCCCcccCCCCCccccccccCceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEEC----
Q 003975 325 EKFSSKILISFCLEAGYHVFDESTHFSSDLQTSSKSLRKGSIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYG---- 399 (782)
Q Consensus 325 ~~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~---- 399 (782)
....|+|.+++++. +..|.|.|.|++|+||+.++. ..+. ||||+++++
T Consensus 6 ~~~~G~l~~sl~y~-------------------------~~~~~L~V~v~~a~~L~~~d~--~~~~~dpyv~v~l~~~~~ 58 (148)
T 3fdw_A 6 IFVTGRIAFSLKYE-------------------------QQTQSLVVHVKECHQLAYADE--AKKRSNPYVKTYLLPDKS 58 (148)
T ss_dssp CCCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCSBT--TTTBCCEEEEEEEETCCS
T ss_pred CccceEEEEEEEEe-------------------------CCCCEEEEEEEEecCCCCccc--CCCCCCeEEEEEEEcCCc
Confidence 34569999999873 345799999999999998762 2355 999999995
Q ss_pred -CEEEeecccCCCCCCeeccEEEEEeeCC---CceEEEEEEeCCcCCCCCCCCCCCccEEEEEEcccccCCceEEEEEee
Q 003975 400 -NKWIRTRTILDTLAPRWNEQYTWDVYDP---CTVITIGVFDNCYVNGSKDDAKDQRIGKVRIRLSTLETDRIYTHYYPL 475 (782)
Q Consensus 400 -~~~~rT~~~~~t~~P~wne~~~f~v~~~---~~~l~i~v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L 475 (782)
...+||+++++|+||+|||.|.|.+... ...|.|+|||++.++ +|++||++.|+|+++..+....+||+|
T Consensus 59 ~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d~~~------~~~~iG~~~i~l~~l~~~~~~~~W~~L 132 (148)
T 3fdw_A 59 RQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGRFG------RNTFLGEAEIQMDSWKLDKKLDHCLPL 132 (148)
T ss_dssp GGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEECGGG------CEEEEEEEEEEHHHHHHHCCSEEEEEC
T ss_pred ccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEECCCCc------CCcEEEEEEEEcccccccCCccceEEC
Confidence 3479999999999999999999998753 347999999999876 899999999999999877777899999
Q ss_pred eecCC
Q 003975 476 LLLTP 480 (782)
Q Consensus 476 ~~~~~ 480 (782)
.....
T Consensus 133 ~~~~~ 137 (148)
T 3fdw_A 133 HGKIS 137 (148)
T ss_dssp BCC--
T ss_pred cCccc
Confidence 86443
No 31
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.74 E-value=3.9e-18 Score=161.16 Aligned_cols=116 Identities=16% Similarity=0.180 Sum_probs=99.3
Q ss_pred ccceEEEEEEeccCccccCCCcccCCCCCccccccccCceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEECC-----
Q 003975 327 FSSKILISFCLEAGYHVFDESTHFSSDLQTSSKSLRKGSIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYGN----- 400 (782)
Q Consensus 327 ~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~----- 400 (782)
..|+|++++.+. +..+.|+|.|++|+||+++|. .|. ||||++++.+
T Consensus 28 ~~G~l~~sl~y~-------------------------~~~~~L~V~Vi~a~~L~~~d~---~g~sDPyVkv~l~~~~~~~ 79 (155)
T 2z0u_A 28 GATRIQIALKYD-------------------------EKNKQFAILIIQLSNLSALLQ---QQDQKVNIRVAVLPCSEST 79 (155)
T ss_dssp CCEEEEEEEEEE-------------------------TTTTEEEEEEEEEECGGGTCC---SCCSEEEEEEEEESCSCHH
T ss_pred CcEEEEEEEEEc-------------------------CCCCEEEEEEEEccCcCCccc---CCCCCEEEEEEEecCCCCC
Confidence 458898888763 335799999999999999864 366 9999999954
Q ss_pred -EEEeecccCCCCCCeeccEEEEEeeCC---CceEEEEEEeCCcCCCCCCCCCCCccEEEEEEccccc-CCceEEEEEee
Q 003975 401 -KWIRTRTILDTLAPRWNEQYTWDVYDP---CTVITIGVFDNCYVNGSKDDAKDQRIGKVRIRLSTLE-TDRIYTHYYPL 475 (782)
Q Consensus 401 -~~~rT~~~~~t~~P~wne~~~f~v~~~---~~~l~i~v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~-~~~~~~~w~~L 475 (782)
.++||+++++|+||+|||.|.|.+... ...|.|+|||++.++ +|++||.+.|+|+++. .+....+||+|
T Consensus 80 ~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~d~~~------~~d~iG~~~i~l~~l~~~~~~~~~W~~L 153 (155)
T 2z0u_A 80 TCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTDRSH------LEECLGGAQISLAEVCRSGERSTRWYNL 153 (155)
T ss_dssp HHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEECTTS------CEEEEEEEEEECTTSCTTCCCEEEEEEE
T ss_pred ccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEECCCCC------CCcEEEEEEEEHHHccCCCCccccceEc
Confidence 279999999999999999999998642 468999999999876 8999999999999996 46778999998
Q ss_pred e
Q 003975 476 L 476 (782)
Q Consensus 476 ~ 476 (782)
.
T Consensus 154 ~ 154 (155)
T 2z0u_A 154 L 154 (155)
T ss_dssp B
T ss_pred c
Confidence 5
No 32
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.74 E-value=9.1e-18 Score=154.05 Aligned_cols=115 Identities=24% Similarity=0.419 Sum_probs=93.9
Q ss_pred ccceEEEEEEeccCccccCCCcccCCCCCccccccccCceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEE-----CC
Q 003975 327 FSSKILISFCLEAGYHVFDESTHFSSDLQTSSKSLRKGSIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKY-----GN 400 (782)
Q Consensus 327 ~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~-----~~ 400 (782)
..|+|.+++.+. +..|.|.|+|++|+||++++.. |. ||||++++ +.
T Consensus 3 ~~G~l~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~d~~---~~~dpyv~v~~~~~~~~~ 54 (129)
T 2bwq_A 3 LSGQLSIKLWFD-------------------------KVGHQLIVTILGAKDLPSREDG---RPRNPYVKIYFLPDRSDK 54 (129)
T ss_dssp CCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCCTTS---CCBCEEEEEEEESSCSGG
T ss_pred eeEEEEEEEEEc-------------------------cCCCEEEEEEEEeeCCCCCCCC---CCCCCEEEEEEecCCCCC
Confidence 358999998863 3347999999999999988643 66 99999999 45
Q ss_pred EEEeecccCCCCCCeeccEEEEEeeC----CCceEEEEEEeCCcCCCCCCCCC--CCccEEEEEEcccccCCceEEEEEe
Q 003975 401 KWIRTRTILDTLAPRWNEQYTWDVYD----PCTVITIGVFDNCYVNGSKDDAK--DQRIGKVRIRLSTLETDRIYTHYYP 474 (782)
Q Consensus 401 ~~~rT~~~~~t~~P~wne~~~f~v~~----~~~~l~i~v~d~~~~~~~~~~~~--d~~lG~~~i~l~~l~~~~~~~~w~~ 474 (782)
...||+++++|.||+|||.|.|.+.. ....|.|+|||++.++ + |++||++.|+|.++.... ..+||+
T Consensus 55 ~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~d~~~------~~~~~~lG~~~i~l~~l~~~~-~~~W~~ 127 (129)
T 2bwq_A 55 NKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVR------EEESEFLGEILIELETALLDD-EPHWYK 127 (129)
T ss_dssp GEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC-------------CEEEEEEEEEGGGCCCSS-CEEEEE
T ss_pred cceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEECCcCc------CcCCceeEEEEEEccccCCCc-CCccEE
Confidence 78999999999999999999999643 2469999999999875 5 999999999999987655 789999
Q ss_pred ee
Q 003975 475 LL 476 (782)
Q Consensus 475 L~ 476 (782)
|.
T Consensus 128 Lq 129 (129)
T 2bwq_A 128 LQ 129 (129)
T ss_dssp CC
T ss_pred Cc
Confidence 84
No 33
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=9.8e-18 Score=156.40 Aligned_cols=120 Identities=33% Similarity=0.451 Sum_probs=101.6
Q ss_pred cCCCceeeeeccccceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEEC---CeEeeeccccCCCCCccccEEEEEec---c
Q 003975 24 RGGDKTASTYDLVELMHYLCVNVVKARNLPVMDVSGSLDPYVEVKLG---NYKGITKHLEKNQNPVWNQIFAFSKE---R 97 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~---~~~~kT~~i~~t~nP~Wne~f~f~~~---~ 97 (782)
.|...+++.|. +..+.|.|+|++|++|+..|..|.+||||++++. .++++|+++++|.||+|||+|.|.+. +
T Consensus 12 ~G~l~~~l~y~--~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~ 89 (141)
T 2d8k_A 12 LGRIQFSVGYN--FQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEK 89 (141)
T ss_dssp CCEEEEEEEEC--SSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHH
T ss_pred eeEEEEEEEEe--CCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHH
Confidence 35455666655 4678999999999999999999999999999994 36789999999999999999999852 2
Q ss_pred CCCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCEEEEeccCCC
Q 003975 98 LQSSLLEVTVKDKDIG-KDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKKG 150 (782)
Q Consensus 98 ~~~~~L~i~V~d~d~~-~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~g 150 (782)
.....|.|+|||++.. +|++||++.++|.++..+. ...+||+|.....
T Consensus 90 ~~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~~~ 138 (141)
T 2d8k_A 90 VVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQ-----MQTFWKDLKPSGP 138 (141)
T ss_dssp HTTSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTS-----CEEEEECCEECCC
T ss_pred cccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCC-----CccEEEECcCCCC
Confidence 3467899999999998 8999999999999997653 3678999998653
No 34
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.74 E-value=1.7e-17 Score=152.95 Aligned_cols=122 Identities=24% Similarity=0.296 Sum_probs=97.8
Q ss_pred eEEEEEEEEeecCCCCccCCCCCC-CcEEEEEECC--EEEeecccCCCCCCeeccEEEEEeeCCCceEEEEEEeCCcCCC
Q 003975 367 GTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYGN--KWIRTRTILDTLAPRWNEQYTWDVYDPCTVITIGVFDNCYVNG 443 (782)
Q Consensus 367 g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~--~~~rT~~~~~t~~P~wne~~~f~v~~~~~~l~i~v~d~~~~~~ 443 (782)
..|+|+|++|+||+++|.. |. ||||++++++ +.++|+++++|+||+|||.|.|.+.++. .|.|+|||++.++.
T Consensus 5 ~~L~V~v~~a~~L~~~d~~---g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~l~~~v~d~d~~~~ 80 (132)
T 3pyc_A 5 IKIRLTVLCAKNLAKKDFF---RLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTD-SITISVWNHKKIHK 80 (132)
T ss_dssp EEEEEEEEEEESCCCCSTT---CCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTC-CEEEEEEEGGGTTS
T ss_pred EEEEEEEEEeECCCCCCCC---CCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCC-EEEEEEEECCCCCC
Confidence 5899999999999988653 66 9999999964 7899999999999999999999998764 59999999998750
Q ss_pred CCCCCCCCccEEEEEEcccc-cCCceEEEEEeeeecCCC-CCCcCcEEEEEEEE
Q 003975 444 SKDDAKDQRIGKVRIRLSTL-ETDRIYTHYYPLLLLTPS-GLKNNGELHLALRF 495 (782)
Q Consensus 444 ~~~~~~d~~lG~~~i~l~~l-~~~~~~~~w~~L~~~~~~-g~~~~G~i~l~~~~ 495 (782)
...|++||.+.|++..+ ........|++|....+. ..+..|+|++++..
T Consensus 81 ---~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 81 ---KQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp ---STTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred ---CCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 11289999999999998 222223588999875432 23447999998753
No 35
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.74 E-value=1.2e-17 Score=157.87 Aligned_cols=118 Identities=31% Similarity=0.457 Sum_probs=100.9
Q ss_pred cCCCceeeeeccccceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEEC---CeEeeeccccCCCCCccccEEEEEecc--C
Q 003975 24 RGGDKTASTYDLVELMHYLCVNVVKARNLPVMDVSGSLDPYVEVKLG---NYKGITKHLEKNQNPVWNQIFAFSKER--L 98 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~---~~~~kT~~i~~t~nP~Wne~f~f~~~~--~ 98 (782)
.|...+++.|+. ..+.|.|+|++|++|+..|..|.+||||++++. .++++|+++++|.||+|||+|.|.+.. .
T Consensus 28 ~G~l~~~l~y~~--~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l 105 (152)
T 1rsy_A 28 LGKLQYSLDYDF--QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSEL 105 (152)
T ss_dssp CCEEEEEEEEET--TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHH
T ss_pred ceEEEEEEEEeC--CCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHc
Confidence 355566666654 668999999999999999999999999999994 467899999999999999999998853 2
Q ss_pred CCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCEEEEeccC
Q 003975 99 QSSLLEVTVKDKDIG-KDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDK 148 (782)
Q Consensus 99 ~~~~L~i~V~d~d~~-~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~ 148 (782)
....|.|+|||++.. +|++||++.++|.++..+. ...+||+|.+.
T Consensus 106 ~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~ 151 (152)
T 1rsy_A 106 GGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGH-----VTEEWRDLQSA 151 (152)
T ss_dssp TTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSS-----CEEEEEECBCC
T ss_pred CCCEEEEEEEECCCCCCCcEEEEEEEEchhccCCC-----CcceEEECCCC
Confidence 468899999999998 8999999999999997643 36799999864
No 36
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.74 E-value=2.4e-18 Score=160.82 Aligned_cols=117 Identities=37% Similarity=0.533 Sum_probs=100.7
Q ss_pred cCCCceeeeeccccceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECCe--------------EeeeccccCCCCCcccc
Q 003975 24 RGGDKTASTYDLVELMHYLCVNVVKARNLPVMDVSGSLDPYVEVKLGNY--------------KGITKHLEKNQNPVWNQ 89 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~--------------~~kT~~i~~t~nP~Wne 89 (782)
.|...+++.|+ .+.|.|+|++|++|+..|..|.+||||++++++. +++|+++++|.||+|||
T Consensus 6 ~G~i~~~l~y~----~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne 81 (142)
T 1rh8_A 6 TGEIQLQINYD----LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQ 81 (142)
T ss_dssp CCEEEEEEEEE----TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEE
T ss_pred ceEEEEEEEEc----CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCC
Confidence 35667788877 5799999999999999999999999999999863 47999999999999999
Q ss_pred EEEEE-ec--cCCCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCEEEEeccCC
Q 003975 90 IFAFS-KE--RLQSSLLEVTVKDKDIG-KDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKK 149 (782)
Q Consensus 90 ~f~f~-~~--~~~~~~L~i~V~d~d~~-~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~ 149 (782)
+|.|. +. ++....|.|+|||++.. ++++||++.++|.++.... ...+||+|.+..
T Consensus 82 ~f~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~-----~~~~W~~L~~~~ 140 (142)
T 1rh8_A 82 TVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLD-----NTPRWYPLKEQT 140 (142)
T ss_dssp EEEECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGT-----TCCEEEECBCCC
T ss_pred EEEECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEeccccccCC-----CCCeEEECCccC
Confidence 99997 53 33467899999999998 8999999999999987543 267999998864
No 37
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.74 E-value=6.3e-18 Score=157.72 Aligned_cols=120 Identities=28% Similarity=0.535 Sum_probs=101.7
Q ss_pred cCCCceeeeeccccceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEE-----CCeEeeeccccCCCCCccccEEEEEe-c-
Q 003975 24 RGGDKTASTYDLVELMHYLCVNVVKARNLPVMDVSGSLDPYVEVKL-----GNYKGITKHLEKNQNPVWNQIFAFSK-E- 96 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~-----~~~~~kT~~i~~t~nP~Wne~f~f~~-~- 96 (782)
.|...++..|+. ..+.|.|+|++|++|+.+|..|.+||||++++ +.++++|+++++|.||+|||+|.|.+ .
T Consensus 7 ~G~i~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~ 84 (141)
T 1v27_A 7 GGQLSIKLWFDK--VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHR 84 (141)
T ss_dssp CCEEEEEEEEET--TTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCT
T ss_pred ccEEEEEEEEeC--CCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCH
Confidence 466667777664 56899999999999999999999999999999 34688999999999999999999994 3
Q ss_pred -cCCCCeEEEEEEeCCCC-C--CceeEEEEEEccccCCCCCCCCCCCCEEEEeccCCCC
Q 003975 97 -RLQSSLLEVTVKDKDIG-K--DDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKKGD 151 (782)
Q Consensus 97 -~~~~~~L~i~V~d~d~~-~--d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~g~ 151 (782)
+.....|.|+|||++.. + +++||++.++|.++.... ..+||+|.+.+..
T Consensus 85 ~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~------~~~W~~L~~~~~g 137 (141)
T 1v27_A 85 REFRERMLEITLWDQARVREEESEFLGEILIELETALLDD------EPHWYKLQTHDSG 137 (141)
T ss_dssp TGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS------EEEEEECBCCSSC
T ss_pred HHhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC------CCceEECcccccC
Confidence 33458999999999998 5 999999999999987531 6799999986543
No 38
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.74 E-value=3.8e-18 Score=161.21 Aligned_cols=117 Identities=20% Similarity=0.252 Sum_probs=99.3
Q ss_pred cCCCceeeeeccccceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC------eEeeeccccCCCCCccccEEEEEecc
Q 003975 24 RGGDKTASTYDLVELMHYLCVNVVKARNLPVMDVSGSLDPYVEVKLGN------YKGITKHLEKNQNPVWNQIFAFSKER 97 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~------~~~kT~~i~~t~nP~Wne~f~f~~~~ 97 (782)
.|...+++.|+. ..+.|.|+|++|++|+++|..|.+||||++++.+ .++||+++++|+||+|||+|.|.+..
T Consensus 29 ~G~l~~sl~y~~--~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~ 106 (155)
T 2z0u_A 29 ATRIQIALKYDE--KNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSY 106 (155)
T ss_dssp CEEEEEEEEEET--TTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCH
T ss_pred cEEEEEEEEEcC--CCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCH
Confidence 345566766665 5689999999999999999999999999999965 27899999999999999999999863
Q ss_pred --CCCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCEEEEec
Q 003975 98 --LQSSLLEVTVKDKDIG-KDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLE 146 (782)
Q Consensus 98 --~~~~~L~i~V~d~d~~-~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~ 146 (782)
+....|.|+|||+|.. ++++||++.++|.++... .....+||+|.
T Consensus 107 ~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~----~~~~~~W~~L~ 154 (155)
T 2z0u_A 107 PALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRS----GERSTRWYNLL 154 (155)
T ss_dssp HHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTT----CCCEEEEEEEB
T ss_pred HHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCC----CCccccceEcc
Confidence 2357899999999998 999999999999999632 12367999986
No 39
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.74 E-value=9.4e-18 Score=156.93 Aligned_cols=116 Identities=32% Similarity=0.471 Sum_probs=99.2
Q ss_pred CCCceeeeeccccceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEE---CCeEeeeccccCCCCCccccEEEEEec--cCC
Q 003975 25 GGDKTASTYDLVELMHYLCVNVVKARNLPVMDVSGSLDPYVEVKL---GNYKGITKHLEKNQNPVWNQIFAFSKE--RLQ 99 (782)
Q Consensus 25 ~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~---~~~~~kT~~i~~t~nP~Wne~f~f~~~--~~~ 99 (782)
|...++..|+ ...+.|.|+|++|++|+..|..|.+||||++++ +.++++|+++++|.||+|||+|.|.+. +..
T Consensus 21 G~l~~~l~y~--~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~ 98 (143)
T 3f04_A 21 GKLQYSLDYD--FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELG 98 (143)
T ss_dssp CEEEEEEEEE--TTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHT
T ss_pred EEEEEEEEEe--CCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcC
Confidence 3444555554 577899999999999999998899999999999 446899999999999999999999986 334
Q ss_pred CCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCEEEEecc
Q 003975 100 SSLLEVTVKDKDIG-KDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLED 147 (782)
Q Consensus 100 ~~~L~i~V~d~d~~-~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~ 147 (782)
...|.|+|||++.. +|++||++.++|.++..+. ...+|++|+.
T Consensus 99 ~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~ 142 (143)
T 3f04_A 99 GKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGH-----VTEEWRDLQS 142 (143)
T ss_dssp TCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTS-----CEEEEEECBC
T ss_pred CCEEEEEEEeCCCCCCCceEEEEEEEHHHccCCC-----CcceEEECcC
Confidence 58899999999998 9999999999999997653 3679999975
No 40
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=1.1e-17 Score=156.18 Aligned_cols=121 Identities=17% Similarity=0.227 Sum_probs=100.4
Q ss_pred ccccceEEEEEEeccCccccCCCcccCCCCCccccccccCceeEEEEEEEEeecCCCCccCCCCCCCcEEEEEECC----
Q 003975 325 EKFSSKILISFCLEAGYHVFDESTHFSSDLQTSSKSLRKGSIGTLELGILSAKNLMQMKSKDGKLTDAYCVAKYGN---- 400 (782)
Q Consensus 325 ~~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~dpyv~v~~~~---- 400 (782)
....|+|.+++.+. +..+.|.|.|++|+||++++.. |.||||++++.+
T Consensus 7 ~~~~G~l~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~d~~---g~dpyv~v~l~~~~~~ 58 (142)
T 2dmg_A 7 GSPLGQIQLTIRHS-------------------------SQRNKLIVVVHACRNLIAFSED---GSDPYVRMYLLPDKRR 58 (142)
T ss_dssp SCSSCEEEEEEEEE-------------------------TTTTEEEEEEEEEECCCCSSTT---CCCEEEEEEEESCCCS
T ss_pred CCCcceEEEEEEEe-------------------------CCCCEEEEEEEEeECCCCCCCC---CCCeeEEEEEEcCCCC
Confidence 34569999998863 3347999999999999998753 289999999932
Q ss_pred -EEEeecccCCCCCCeeccEEEEEeeCC---CceEEEEEEeCCcCCCCCCCCCCCccEEEEEEcccccCCceEEEEEeee
Q 003975 401 -KWIRTRTILDTLAPRWNEQYTWDVYDP---CTVITIGVFDNCYVNGSKDDAKDQRIGKVRIRLSTLETDRIYTHYYPLL 476 (782)
Q Consensus 401 -~~~rT~~~~~t~~P~wne~~~f~v~~~---~~~l~i~v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~ 476 (782)
..+||+++++|+||+|||.|.|.+... ...|.|+|||++.++. ..|++||++.|+|.++..+....+||+|.
T Consensus 59 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~----~~~~~iG~~~i~l~~~~~~~~~~~W~~L~ 134 (142)
T 2dmg_A 59 SGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGFLS----KDKGLLGKVLVALASEELAKGWTQWYDLT 134 (142)
T ss_dssp SSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCCSSC----CSCCCCEEEEEECCCSTTTTCBCCBCCCB
T ss_pred CCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCCccc----cCCcEEEEEEEecccccccccccceeecc
Confidence 579999999999999999999998642 3599999999997640 12579999999999998877889999998
Q ss_pred e
Q 003975 477 L 477 (782)
Q Consensus 477 ~ 477 (782)
.
T Consensus 135 ~ 135 (142)
T 2dmg_A 135 E 135 (142)
T ss_dssp C
T ss_pred C
Confidence 5
No 41
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.73 E-value=1.9e-17 Score=154.50 Aligned_cols=120 Identities=23% Similarity=0.383 Sum_probs=99.7
Q ss_pred cccceEEEEEEeccCccccCCCcccCCCCCccccccccCceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEE-----C
Q 003975 326 KFSSKILISFCLEAGYHVFDESTHFSSDLQTSSKSLRKGSIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKY-----G 399 (782)
Q Consensus 326 ~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~-----~ 399 (782)
...|+|.+++.+. +..+.|.|.|++|+||+.++.. +. ||||++++ +
T Consensus 5 ~~~G~i~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~d~~---g~~dpyv~v~~~~~~~~ 56 (141)
T 1v27_A 5 SSGGQLSIKLWFD-------------------------KVGHQLIVTILGAKDLPSREDG---RPRNPYVKIYFLPDRSD 56 (141)
T ss_dssp CCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCCSSS---CCCCEEEECCCSSCCSS
T ss_pred CcccEEEEEEEEe-------------------------CCCCEEEEEEEEccCCCCcCCC---CCCCCEEEEEEecCCCC
Confidence 4569999999863 3347999999999999988643 66 99999999 4
Q ss_pred CEEEeecccCCCCCCeeccEEEEEeeC----CCceEEEEEEeCCcCCCCCCCCCCCccEEEEEEcccccCCceEEEEEee
Q 003975 400 NKWIRTRTILDTLAPRWNEQYTWDVYD----PCTVITIGVFDNCYVNGSKDDAKDQRIGKVRIRLSTLETDRIYTHYYPL 475 (782)
Q Consensus 400 ~~~~rT~~~~~t~~P~wne~~~f~v~~----~~~~l~i~v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L 475 (782)
.+.+||+++++|+||+|||.|.|.+.. ....|.|+|||++.++ ...|++||++.|+|.++.... ..+||+|
T Consensus 57 ~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~----~~~~~~lG~~~i~l~~l~~~~-~~~W~~L 131 (141)
T 1v27_A 57 KNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVR----EEESEFLGEILIELETALLDD-EPHWYKL 131 (141)
T ss_dssp SSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEBCSSS----SCCBCCCEEEEEEGGGCCCSS-EEEEEEC
T ss_pred CcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEECCCCc----CCCCceEEEEEEEccccCCCC-CCceEEC
Confidence 578999999999999999999999542 2469999999999875 012899999999999987655 7899999
Q ss_pred eec
Q 003975 476 LLL 478 (782)
Q Consensus 476 ~~~ 478 (782)
...
T Consensus 132 ~~~ 134 (141)
T 1v27_A 132 QTH 134 (141)
T ss_dssp BCC
T ss_pred ccc
Confidence 863
No 42
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.73 E-value=3.5e-17 Score=157.51 Aligned_cols=123 Identities=16% Similarity=0.144 Sum_probs=100.6
Q ss_pred ceeEEEEEEEEeecCCCCccCCCCCCCcEEEEEECCEEEeecccCCCCCCeeccEEEEEeeCCCceEEEEEEeCCcCCCC
Q 003975 365 SIGTLELGILSAKNLMQMKSKDGKLTDAYCVAKYGNKWIRTRTILDTLAPRWNEQYTWDVYDPCTVITIGVFDNCYVNGS 444 (782)
Q Consensus 365 ~~g~l~v~v~~a~~L~~~~~~~~~~~dpyv~v~~~~~~~rT~~~~~t~~P~wne~~~f~v~~~~~~l~i~v~d~~~~~~~ 444 (782)
..+.|+|+|++|++|+..+.. .+.||||+|+++++.+||+++++|+||+|||.|.|.+. +...|.|+|||++.++
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~--~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~-~~~~L~~~V~D~d~~~-- 108 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNW--FGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVT-PVSKLHFRVWSHQTLK-- 108 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--C--CCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEEC-TTCEEEEEEEECCSSS--
T ss_pred CceEEEEEEEEeECCCCcccC--CCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeC-CCCEEEEEEEECCCCC--
Confidence 457999999999999944322 22599999999999999999999999999999999985 5789999999999876
Q ss_pred CCCCCCCccEEEEEEcccccCC-----ceEEEEEeeeecCCCCCCcCcEEEEEEEEEE
Q 003975 445 KDDAKDQRIGKVRIRLSTLETD-----RIYTHYYPLLLLTPSGLKNNGELHLALRFTC 497 (782)
Q Consensus 445 ~~~~~d~~lG~~~i~l~~l~~~-----~~~~~w~~L~~~~~~g~~~~G~i~l~~~~~~ 497 (782)
+|++||++.|+|.++..+ .....|++|.... .+.+..|+|.+.+.+..
T Consensus 109 ----~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~-~~~~~~G~L~v~l~~l~ 161 (173)
T 2nq3_A 109 ----SDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDK-EPTETIGDLSICLDGLQ 161 (173)
T ss_dssp ----CCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESS-CTTSEEEEEEEEEESEE
T ss_pred ----CCceEEEEEEEHHHhcccCCCCcceeEEEEECccCC-CCCcccEEEEEEEeeee
Confidence 899999999999998542 1236799998753 23345799999987643
No 43
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.73 E-value=2.1e-17 Score=156.29 Aligned_cols=117 Identities=21% Similarity=0.310 Sum_probs=98.3
Q ss_pred cccceEEEEEEeccCccccCCCcccCCCCCccccccccCceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEE-----C
Q 003975 326 KFSSKILISFCLEAGYHVFDESTHFSSDLQTSSKSLRKGSIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKY-----G 399 (782)
Q Consensus 326 ~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~-----~ 399 (782)
...|++.+++++. +..|.|.|+|++|+||+.++ . |. ||||++.+ .
T Consensus 11 ~~~G~~~lsL~y~-------------------------~~~~~L~V~v~~a~~L~~~d-~---g~~Dpyv~v~l~~~~~~ 61 (153)
T 3fbk_A 11 KVQGAGQLRLSID-------------------------AQDRVLLLHIIEGKGLISKQ-P---GTCDPYVKISLIPEDSR 61 (153)
T ss_dssp --CCCCEEEEEEE-------------------------ESSSEEEEEEEEEESCCCCS-S---SCCCEEEEEEEESCSCC
T ss_pred CCCCEEEEEEEEE-------------------------CCCCEEEEEEEEeeCCCCCC-C---CCCCEEEEEEEEcCCCC
Confidence 4468888888863 34589999999999999876 2 55 99999999 2
Q ss_pred CEEEeecccCCCCCCeeccEEEEEee--CCCceEEEEEEeCCcCCCCCCCCC-CCccEEEEEEcccccC-CceEEEEEee
Q 003975 400 NKWIRTRTILDTLAPRWNEQYTWDVY--DPCTVITIGVFDNCYVNGSKDDAK-DQRIGKVRIRLSTLET-DRIYTHYYPL 475 (782)
Q Consensus 400 ~~~~rT~~~~~t~~P~wne~~~f~v~--~~~~~l~i~v~d~~~~~~~~~~~~-d~~lG~~~i~l~~l~~-~~~~~~w~~L 475 (782)
....+|+++++|+||+|||.|.|.+. +....|.|+|||++.++ + |++||++.|+|+++.. +.....||+|
T Consensus 62 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~~------~~d~~lG~~~i~l~~l~~~~~~~~~W~~L 135 (153)
T 3fbk_A 62 LRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRASQS------RQSGLIGCMSFGVKSLLTPDKEISGWYYL 135 (153)
T ss_dssp TTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECCSSG------GGCEEEEEEEEEHHHHTC--CCEEEEEEC
T ss_pred ccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCCCCC------CCCcEEEEEEEEHHHhcCCCCccccEEEC
Confidence 35799999999999999999999994 44567999999999765 5 8999999999999985 7788999999
Q ss_pred ee
Q 003975 476 LL 477 (782)
Q Consensus 476 ~~ 477 (782)
..
T Consensus 136 ~~ 137 (153)
T 3fbk_A 136 LG 137 (153)
T ss_dssp BC
T ss_pred CC
Confidence 86
No 44
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.72 E-value=3.9e-17 Score=151.48 Aligned_cols=101 Identities=26% Similarity=0.417 Sum_probs=89.9
Q ss_pred eEEEEEEEEeecCCCCccCCCCCC-CcEEEEEE-----CCEEEeecccCCCCCCeeccEEEEEeeCC--CceEEEEEEeC
Q 003975 367 GTLELGILSAKNLMQMKSKDGKLT-DAYCVAKY-----GNKWIRTRTILDTLAPRWNEQYTWDVYDP--CTVITIGVFDN 438 (782)
Q Consensus 367 g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~-----~~~~~rT~~~~~t~~P~wne~~~f~v~~~--~~~l~i~v~d~ 438 (782)
|.|.|+|++|+||+.++.. |. ||||++++ +...++|++++++.||.|||.|.|.+... ...|.|+|||+
T Consensus 16 ~~L~v~v~~a~~L~~~d~~---~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~ 92 (137)
T 3rdl_A 16 EKLHVTVRDAKNLIPMDPN---GLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDW 92 (137)
T ss_dssp TEEEEEEEEEESCCCCSTT---SCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCCCCC---CCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEEC
Confidence 6999999999999988643 66 99999999 56789999999999999999999998753 35899999999
Q ss_pred CcCCCCCCCCCCCccEEEEEEcccccCCceEEEEEeeee
Q 003975 439 CYVNGSKDDAKDQRIGKVRIRLSTLETDRIYTHYYPLLL 477 (782)
Q Consensus 439 ~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~ 477 (782)
+.++ +|++||.+.|+|+++..+. ..+||+|..
T Consensus 93 d~~~------~~~~iG~~~i~l~~l~~~~-~~~W~~L~~ 124 (137)
T 3rdl_A 93 DRTT------RNDFMGSLSFGVSELMKMP-ASGWYKLLN 124 (137)
T ss_dssp CSSS------CCEEEEEEEEEHHHHHHSC-EEEEEECBC
T ss_pred CCCC------CCceEEEEEEeHHHhccCc-cCceEECcC
Confidence 9876 8999999999999997766 799999985
No 45
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.72 E-value=1.8e-17 Score=156.81 Aligned_cols=119 Identities=20% Similarity=0.321 Sum_probs=99.1
Q ss_pred cCCCceeeeeccccceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEEC-----CeEeeeccccCCCCCccccEEEEEe--c
Q 003975 24 RGGDKTASTYDLVELMHYLCVNVVKARNLPVMDVSGSLDPYVEVKLG-----NYKGITKHLEKNQNPVWNQIFAFSK--E 96 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~-----~~~~kT~~i~~t~nP~Wne~f~f~~--~ 96 (782)
.|...+++.|+. ..+.|.|+|++|++|+..| .|.+||||++.+. ..+++|+++++|.||+|||+|.|.+ .
T Consensus 13 ~G~~~lsL~y~~--~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 89 (153)
T 3fbk_A 13 QGAGQLRLSIDA--QDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEE 89 (153)
T ss_dssp CCCCEEEEEEEE--SSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGG
T ss_pred CCEEEEEEEEEC--CCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccH
Confidence 355667777665 6689999999999999999 6999999999993 3578999999999999999999998 4
Q ss_pred cCCCCeEEEEEEeCCCC-C-CceeEEEEEEccccCCCCCCCCCCCCEEEEeccCCC
Q 003975 97 RLQSSLLEVTVKDKDIG-K-DDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKKG 150 (782)
Q Consensus 97 ~~~~~~L~i~V~d~d~~-~-d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~g 150 (782)
+. ...|.|+|||++.. + |++||++.++|.++.... ....+||+|.+...
T Consensus 90 ~~-~~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~----~~~~~W~~L~~~~~ 140 (153)
T 3fbk_A 90 DD-QKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPD----KEISGWYYLLGEHL 140 (153)
T ss_dssp GT-TSEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC------CCEEEEEECBCTTG
T ss_pred Hh-CCEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCC----CccccEEECCChhh
Confidence 44 35699999999997 5 999999999999997511 13678999988653
No 46
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.72 E-value=6.5e-17 Score=150.05 Aligned_cols=117 Identities=19% Similarity=0.250 Sum_probs=97.6
Q ss_pred cCCCceeeeeccccceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEEC---C-eEeeeccccCCCCCccccEEEEEecc--
Q 003975 24 RGGDKTASTYDLVELMHYLCVNVVKARNLPVMDVSGSLDPYVEVKLG---N-YKGITKHLEKNQNPVWNQIFAFSKER-- 97 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~---~-~~~kT~~i~~t~nP~Wne~f~f~~~~-- 97 (782)
.|...+++.|+. ..+.|.|+|++|+ ++|..|.+||||++++. + .+++|+++++|+||+|||+|.|.+..
T Consensus 12 ~G~l~~sl~y~~--~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~ 86 (138)
T 1wfm_A 12 APKLHYCLDYDC--QKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEE 86 (138)
T ss_dssp CCEEEEEEEEET--TTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTS
T ss_pred ceEEEEEEEEeC--CCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHH
Confidence 455667777765 5689999999999 46778999999999994 2 36899999999999999999999853
Q ss_pred CCCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCEEEEeccCCC
Q 003975 98 LQSSLLEVTVKDKDIG-KDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKKG 150 (782)
Q Consensus 98 ~~~~~L~i~V~d~d~~-~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~g 150 (782)
.....|.|+|||+|.+ +|++||++.++|.++.... ...+|++|....+
T Consensus 87 l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~-----~~~~W~~L~~~~~ 135 (138)
T 1wfm_A 87 LPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPL-----GAAQWGELKTSGP 135 (138)
T ss_dssp STTCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCT-----TCCEEEECCCCSC
T ss_pred cCCCEEEEEEEECCCCCCCcEEEEEEEEcccccCcc-----cccceeeCcCCCc
Confidence 3467899999999998 9999999999999996432 3679999988543
No 47
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.72 E-value=7.1e-17 Score=153.85 Aligned_cols=119 Identities=25% Similarity=0.296 Sum_probs=99.7
Q ss_pred ccccceEEEEEEeccCccccCCCcccCCCCCccccccccCceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEECC---
Q 003975 325 EKFSSKILISFCLEAGYHVFDESTHFSSDLQTSSKSLRKGSIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYGN--- 400 (782)
Q Consensus 325 ~~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~--- 400 (782)
....|+|.+++.+ .+..|.|.|+|++|+||+.++.. |. ||||++++++
T Consensus 8 ~~~~G~l~~~l~y-------------------------~~~~~~L~V~v~~a~~L~~~d~~---g~~dpyv~v~l~~~~~ 59 (159)
T 1tjx_A 8 LEKLGDICFSLRY-------------------------VPTAGKLTVVILEAKNLKKMDVG---GLSDPYVKIHLMQNGK 59 (159)
T ss_dssp GGCCCEEEEEEEE-------------------------ETTTTEEEEEEEEEESCCCCSTT---SCCCEEEEEEEEETTE
T ss_pred cCcCCeEEEEEEE-------------------------cCCCCEEEEEEEEeeCCCCccCC---CCCCeEEEEEEEeCCc
Confidence 3456999999986 33457999999999999988643 66 9999999952
Q ss_pred --EEEeecccCCCCCCeeccEEEEEeeCC---CceEEEEEEeCCcCCCCCCCCCCCccEEEEEEcccc------------
Q 003975 401 --KWIRTRTILDTLAPRWNEQYTWDVYDP---CTVITIGVFDNCYVNGSKDDAKDQRIGKVRIRLSTL------------ 463 (782)
Q Consensus 401 --~~~rT~~~~~t~~P~wne~~~f~v~~~---~~~l~i~v~d~~~~~~~~~~~~d~~lG~~~i~l~~l------------ 463 (782)
..+||+++++|+||+|||.|.|.+... ...|.|+|||++.++ +|++||.+.|++..+
T Consensus 60 ~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~------~~~~iG~~~i~l~~~~~~~~~w~~l~~ 133 (159)
T 1tjx_A 60 RLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIG------KNDAIGKVFVGYNSTGAELRHWSDMLA 133 (159)
T ss_dssp EEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSS------CCEEEEEEEEETTCCHHHHHHHHHHHH
T ss_pred eeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECCCCC------CCceEEEEEECCCCCCcHHHHHHHHHH
Confidence 478999999999999999999998753 358999999999876 899999999999953
Q ss_pred cCCceEEEEEeeee
Q 003975 464 ETDRIYTHYYPLLL 477 (782)
Q Consensus 464 ~~~~~~~~w~~L~~ 477 (782)
..+....+||+|..
T Consensus 134 ~~~~~~~~W~~L~~ 147 (159)
T 1tjx_A 134 NPRRPIAQWHTLQV 147 (159)
T ss_dssp STTCCEEEEEECBC
T ss_pred CCCCeeeeEEECcC
Confidence 34567889999975
No 48
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.72 E-value=4.1e-17 Score=150.54 Aligned_cols=102 Identities=16% Similarity=0.254 Sum_probs=90.0
Q ss_pred eeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEE-----CCEEEeecccCCCCCCeeccEEEEE-eeC---CCceEEEEE
Q 003975 366 IGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKY-----GNKWIRTRTILDTLAPRWNEQYTWD-VYD---PCTVITIGV 435 (782)
Q Consensus 366 ~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~-----~~~~~rT~~~~~t~~P~wne~~~f~-v~~---~~~~l~i~v 435 (782)
.|.|.|+|++|+||+. +. .|. ||||++++ +....||+++++|+||+|||.|.|. +.. ....|.|+|
T Consensus 19 ~~~L~V~V~~a~~L~~-~~---~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V 94 (134)
T 2b3r_A 19 NGTLFIMVMHIKDLVT-ED---GADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSV 94 (134)
T ss_dssp TTEEEEEEEEEECCCC-TT---SCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEE
T ss_pred CCEEEEEEEEeeCCCC-CC---CCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEE
Confidence 4799999999999996 42 355 99999999 4567999999999999999999999 753 357999999
Q ss_pred EeCCcCCCCCCCCCCCccEEEEEEcccccCCceEEEEEeeee
Q 003975 436 FDNCYVNGSKDDAKDQRIGKVRIRLSTLETDRIYTHYYPLLL 477 (782)
Q Consensus 436 ~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~ 477 (782)
||++.++ +|++||++.|+|+++..+....+||+|..
T Consensus 95 ~d~d~~~------~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 95 LSAESLR------ENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp EECCSSS------CCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred EECCCCC------CCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 9999876 89999999999999998888999999975
No 49
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.72 E-value=6.5e-17 Score=150.20 Aligned_cols=120 Identities=19% Similarity=0.228 Sum_probs=98.9
Q ss_pred cccceEEEEEEeccCccccCCCcccCCCCCccccccccCceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEEC---CE
Q 003975 326 KFSSKILISFCLEAGYHVFDESTHFSSDLQTSSKSLRKGSIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYG---NK 401 (782)
Q Consensus 326 ~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~---~~ 401 (782)
...|+|.+++.+. +..+.|.|+|++|+||+.++.. .+. ||||++++. .+
T Consensus 6 ~~~G~l~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~d~~--~~~~dpyv~v~~~~~~~~ 58 (138)
T 1ugk_A 6 SGLGTLFFSLEYN-------------------------FERKAFVVNIKEARGLPAMDEQ--SMTSDPYIKMTILPEKKH 58 (138)
T ss_dssp CCCCEEEEEEEEE-------------------------GGGTEEEEEEEEEESCCCCBTT--TTBCEEEEEEEEETTTCS
T ss_pred CccEEEEEEEEEE-------------------------CCCCEEEEEEEEeeCCCCCCCC--CCCCCCEEEEEEecCCCc
Confidence 4469999998762 3457999999999999988641 255 999999995 37
Q ss_pred EEeecccCCCCCCeeccEEEEE-eeCC---CceEEEEEEeCCcCCCCCCCCCCCccEEEEEEcccccCCc-eEEEEEeee
Q 003975 402 WIRTRTILDTLAPRWNEQYTWD-VYDP---CTVITIGVFDNCYVNGSKDDAKDQRIGKVRIRLSTLETDR-IYTHYYPLL 476 (782)
Q Consensus 402 ~~rT~~~~~t~~P~wne~~~f~-v~~~---~~~l~i~v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~-~~~~w~~L~ 476 (782)
.+||+++++|+||+|||.|.|. +... ...|.|+|||++.++ +|++||++.|+|.++..+. ....|++|.
T Consensus 59 ~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d~~~------~~~~lG~~~i~l~~l~~~~~~~~~~~~l~ 132 (138)
T 1ugk_A 59 KVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDRFS------RDDIIGEVLIPLSGIELSEGKMLMNREII 132 (138)
T ss_dssp EEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEECSSC------CCCCCEEEEEECTTCCCTTCCEEEEEECB
T ss_pred eEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECCCCC------CCcEEEEEEEehhHccCCCCcchhhhhhh
Confidence 8999999999999999999996 6532 459999999999876 8999999999999997754 446679987
Q ss_pred ec
Q 003975 477 LL 478 (782)
Q Consensus 477 ~~ 478 (782)
..
T Consensus 133 ~~ 134 (138)
T 1ugk_A 133 SG 134 (138)
T ss_dssp SS
T ss_pred cC
Confidence 53
No 50
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.71 E-value=1.1e-17 Score=157.30 Aligned_cols=121 Identities=18% Similarity=0.235 Sum_probs=100.3
Q ss_pred cCCCceeeeeccccceeEEEEEEEEeeCCCCCC-CCCCCCcEEEEEECC-----eEeeeccccCCCCCccccEEEEEecc
Q 003975 24 RGGDKTASTYDLVELMHYLCVNVVKARNLPVMD-VSGSLDPYVEVKLGN-----YKGITKHLEKNQNPVWNQIFAFSKER 97 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d-~~g~~dPyv~v~~~~-----~~~kT~~i~~t~nP~Wne~f~f~~~~ 97 (782)
.|...++..|+. ..+.|.|+|++|++|+..| ..|.+||||++.+.+ .+++|+++++|.||+|||+|.|.+..
T Consensus 9 ~G~l~~sl~y~~--~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 86 (148)
T 3fdw_A 9 TGRIAFSLKYEQ--QTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPE 86 (148)
T ss_dssp CCEEEEEEEEET--TTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCS
T ss_pred ceEEEEEEEEeC--CCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeCh
Confidence 455566666654 6789999999999999988 579999999999963 47899999999999999999999864
Q ss_pred C--CCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCEEEEeccCCCC
Q 003975 98 L--QSSLLEVTVKDKDIG-KDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKKGD 151 (782)
Q Consensus 98 ~--~~~~L~i~V~d~d~~-~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~g~ 151 (782)
. ....|.|+|||++.. +|++||++.++|.++..+. ...+||+|.+..+.
T Consensus 87 ~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~~~~ 138 (148)
T 3fdw_A 87 SLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDK-----KLDHCLPLHGKISA 138 (148)
T ss_dssp TTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHC-----CSEEEEECBCC---
T ss_pred hHhCceEEEEEEEECCCCcCCcEEEEEEEEcccccccC-----CccceEECcCcccc
Confidence 2 356799999999998 8999999999999997643 25699999987543
No 51
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.71 E-value=6e-17 Score=150.40 Aligned_cols=115 Identities=24% Similarity=0.343 Sum_probs=95.4
Q ss_pred cceEEEEEEeccCccccCCCcccCCCCCccccccccCceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEECC-----E
Q 003975 328 SSKILISFCLEAGYHVFDESTHFSSDLQTSSKSLRKGSIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYGN-----K 401 (782)
Q Consensus 328 ~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~-----~ 401 (782)
.|+|.+++++. +..|.|.|.|++|+||+.++.. |. ||||++++++ .
T Consensus 2 ~G~l~~sl~y~-------------------------~~~~~L~v~v~~a~~L~~~d~~---g~~dpyv~v~~~~~~~~~~ 53 (138)
T 3n5a_A 2 RGELLLSLCYN-------------------------PSANSIIVNIIKARNLKAMDIG---GTSDPYVKVWLMYKDKRVE 53 (138)
T ss_dssp CCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCCBTT---TBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEEc-------------------------CCCCeEEEEEEEeeCCCCcCCC---CCcCeEEEEEEEeCCCccc
Confidence 48899988862 3457999999999999988643 56 9999999953 4
Q ss_pred EEeecccCCCCCCeeccEEEEEeeCCC---ceEEEEEEeCCcCCCCCCCCCCCccEEEEEEccccc------------CC
Q 003975 402 WIRTRTILDTLAPRWNEQYTWDVYDPC---TVITIGVFDNCYVNGSKDDAKDQRIGKVRIRLSTLE------------TD 466 (782)
Q Consensus 402 ~~rT~~~~~t~~P~wne~~~f~v~~~~---~~l~i~v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~------------~~ 466 (782)
..+|++++++.||+|||.|.|.+.... ..|.|+|||++.++ +|++||++.|+|.++. .+
T Consensus 54 ~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~~~~~------~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~ 127 (138)
T 3n5a_A 54 KKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDKLS------RNDVIGKIYLSWKSGPGEVKHWKDMIARPR 127 (138)
T ss_dssp EEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEECCSSS------CCEEEEEEEESSSSCHHHHHHHHHHHHSTT
T ss_pred eEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEECCCCC------CCcEEEEEEEccccCChHHHHHHHHHhCCC
Confidence 799999999999999999999987543 58999999999876 8999999999999753 44
Q ss_pred ceEEEEEeee
Q 003975 467 RIYTHYYPLL 476 (782)
Q Consensus 467 ~~~~~w~~L~ 476 (782)
+...+|++|.
T Consensus 128 ~~~~~Wh~L~ 137 (138)
T 3n5a_A 128 QPVAQWHQLK 137 (138)
T ss_dssp CCEEEEEECB
T ss_pred CeEEEEeecC
Confidence 5566666664
No 52
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.71 E-value=7.5e-17 Score=151.89 Aligned_cols=101 Identities=23% Similarity=0.377 Sum_probs=89.7
Q ss_pred eEEEEEEEEeecCCCCccCCCCCC-CcEEEEEEC-----CEEEeecccCCCCCCeeccEEEEEeeCC--CceEEEEEEeC
Q 003975 367 GTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYG-----NKWIRTRTILDTLAPRWNEQYTWDVYDP--CTVITIGVFDN 438 (782)
Q Consensus 367 g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~-----~~~~rT~~~~~t~~P~wne~~~f~v~~~--~~~l~i~v~d~ 438 (782)
|.|.|+|++|+||+.++.. +. ||||+|+++ ...+||+++++++||+|||.|.|.+... ...|.|+|||+
T Consensus 31 ~~L~v~v~~a~~L~~~d~~---g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~ 107 (149)
T 1a25_A 31 EVLIVVVRDAKNLVPMDPN---GLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDW 107 (149)
T ss_dssp SEEEEEEEEEESCCCCSTT---SCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCCCCC---CCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEEC
Confidence 5899999999999988643 66 999999996 4679999999999999999999999764 46899999999
Q ss_pred CcCCCCCCCCCCCccEEEEEEcccccCCceEEEEEeeee
Q 003975 439 CYVNGSKDDAKDQRIGKVRIRLSTLETDRIYTHYYPLLL 477 (782)
Q Consensus 439 ~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~ 477 (782)
+.++ +|++||++.|+|.++..+ ...+||+|..
T Consensus 108 d~~~------~~~~iG~~~i~l~~l~~~-~~~~W~~L~~ 139 (149)
T 1a25_A 108 DLTS------RNDFMGSLSFGISELQKA-GVDGWFKLLS 139 (149)
T ss_dssp CSSS------CCEEEEEEEEEHHHHTTC-CEEEEEECBC
T ss_pred CCCC------CCCEEEEEEEEHHHhCcC-ccCCeEEccC
Confidence 9876 899999999999999876 4789999985
No 53
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.71 E-value=4.4e-17 Score=157.08 Aligned_cols=104 Identities=23% Similarity=0.322 Sum_probs=91.4
Q ss_pred eEEEEEEEEeecCCCCccCCCCCC-CcEEEEEECC-----EEEeecccCCCCCCeeccEEEEEeeCCCceEEEEEE-eCC
Q 003975 367 GTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYGN-----KWIRTRTILDTLAPRWNEQYTWDVYDPCTVITIGVF-DNC 439 (782)
Q Consensus 367 g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~-----~~~rT~~~~~t~~P~wne~~~f~v~~~~~~l~i~v~-d~~ 439 (782)
|.|.|+|++|+||+++|. ..|. ||||+|++.+ ..+||+++++|+||+|||+|.|.+......|.|+|| |++
T Consensus 30 ~~L~V~v~~a~~L~~~d~--~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d 107 (171)
T 2q3x_A 30 GQLEVEVIRARSLTQKPG--SKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYG 107 (171)
T ss_dssp TEEEEEEEEEESCCCCC-----CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECS
T ss_pred CEEEEEEEEeeCCCCCCc--CCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCC
Confidence 699999999999998863 1356 9999999853 379999999999999999999999766789999999 999
Q ss_pred cCCCCCCCCCCCccEEEEEEcccccCCceEEEEEeeeec
Q 003975 440 YVNGSKDDAKDQRIGKVRIRLSTLETDRIYTHYYPLLLL 478 (782)
Q Consensus 440 ~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~ 478 (782)
.++ +|++||++.|+|+++..+....+||+|...
T Consensus 108 ~~~------~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 108 RMD------HKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp TTC------SSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCC------CCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 876 899999999999999988889999999863
No 54
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.71 E-value=1.2e-16 Score=148.39 Aligned_cols=115 Identities=13% Similarity=0.098 Sum_probs=96.6
Q ss_pred cccceEEEEEEeccCccccCCCcccCCCCCccccccccCceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEEC---C-
Q 003975 326 KFSSKILISFCLEAGYHVFDESTHFSSDLQTSSKSLRKGSIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYG---N- 400 (782)
Q Consensus 326 ~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~---~- 400 (782)
...|+|++++.+. +..+.|.|+|++|++ +| ..|. ||||+|.+. +
T Consensus 10 ~~~G~l~~sl~y~-------------------------~~~~~L~V~v~~a~~---~d---~~g~sDPyv~v~l~~~~~~ 58 (138)
T 1wfm_A 10 NQAPKLHYCLDYD-------------------------CQKAELFVTRLEAVT---SN---HDGGCDCYVQGSVANRTGS 58 (138)
T ss_dssp SSCCEEEEEEEEE-------------------------TTTTEEEEEEEEEEC---CC---CSSCCCEEEEEEEEETTEE
T ss_pred CcceEEEEEEEEe-------------------------CCCCEEEEEEEEEEc---CC---CCCCcceEEEEEEEcCCCc
Confidence 3469999998763 234799999999994 33 3366 999999993 2
Q ss_pred EEEeecccCCCCCCeeccEEEEEeeCC---CceEEEEEEeCCcCCCCCCCCCCCccEEEEEEcccccCCceEEEEEeeee
Q 003975 401 KWIRTRTILDTLAPRWNEQYTWDVYDP---CTVITIGVFDNCYVNGSKDDAKDQRIGKVRIRLSTLETDRIYTHYYPLLL 477 (782)
Q Consensus 401 ~~~rT~~~~~t~~P~wne~~~f~v~~~---~~~l~i~v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~ 477 (782)
..+||+++++|+||+|||.|.|.+... ...|.|+|||++.++ +|++||++.|+|.++..+....+||+|..
T Consensus 59 ~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~~~------~dd~lG~~~i~l~~l~~~~~~~~W~~L~~ 132 (138)
T 1wfm_A 59 VEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRFS------RHSVAGELRLGLDGTSVPLGAAQWGELKT 132 (138)
T ss_dssp EEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCSSC------TTSCSEEEEEESSSSSSCTTCCEEEECCC
T ss_pred ccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCCCC------CCcEEEEEEEEcccccCcccccceeeCcC
Confidence 368999999999999999999998753 468999999999876 89999999999999987777789999986
No 55
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.71 E-value=3.2e-17 Score=152.12 Aligned_cols=115 Identities=33% Similarity=0.496 Sum_probs=99.1
Q ss_pred CCCceeeeeccccceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEE-----CCeEeeeccccCCCCCccccEEEEEeccC-
Q 003975 25 GGDKTASTYDLVELMHYLCVNVVKARNLPVMDVSGSLDPYVEVKL-----GNYKGITKHLEKNQNPVWNQIFAFSKERL- 98 (782)
Q Consensus 25 ~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~-----~~~~~kT~~i~~t~nP~Wne~f~f~~~~~- 98 (782)
|...++..| ..+.|.|+|++|++|+..|..|.+||||++++ +..+++|+++++|.||+|||+|.|.+...
T Consensus 5 G~l~~~l~~----~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~ 80 (137)
T 3rdl_A 5 GRIYLKAEV----TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSD 80 (137)
T ss_dssp CEEEEEEEE----ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGG
T ss_pred eEEEEEEEE----cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchh
Confidence 555666666 35899999999999999999999999999999 45689999999999999999999998642
Q ss_pred CCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCEEEEeccCC
Q 003975 99 QSSLLEVTVKDKDIG-KDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKK 149 (782)
Q Consensus 99 ~~~~L~i~V~d~d~~-~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~ 149 (782)
....|.|+|||++.. +|++||++.++|.++.... ..+||+|.+..
T Consensus 81 ~~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~------~~~W~~L~~~~ 126 (137)
T 3rdl_A 81 KDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP------ASGWYKLLNQE 126 (137)
T ss_dssp GGCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHSC------EEEEEECBCHH
T ss_pred cCCEEEEEEEECCCCCCCceEEEEEEeHHHhccCc------cCceEECcCcc
Confidence 245899999999988 9999999999999997642 57999998754
No 56
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.71 E-value=3.7e-17 Score=152.69 Aligned_cols=118 Identities=28% Similarity=0.413 Sum_probs=99.8
Q ss_pred cCCCceeeeeccccceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC-----eEeeeccccCCCCCccccEEEEE-ecc
Q 003975 24 RGGDKTASTYDLVELMHYLCVNVVKARNLPVMDVSGSLDPYVEVKLGN-----YKGITKHLEKNQNPVWNQIFAFS-KER 97 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~-----~~~kT~~i~~t~nP~Wne~f~f~-~~~ 97 (782)
.|...+++.|+ +..+.|.|+|++|++|+..+..|.+||||++++++ .+++|+++++|.||+|||+|.|. +..
T Consensus 15 ~G~l~~~l~y~--~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~ 92 (142)
T 2chd_A 15 LGALEFSLLYD--QDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITE 92 (142)
T ss_dssp CCEEEEEEEEE--GGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCH
T ss_pred cceEEEEEEEe--CCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCH
Confidence 35566666666 57789999999999999999999999999999975 68899999999999999999998 532
Q ss_pred --CCCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCEEEEeccC
Q 003975 98 --LQSSLLEVTVKDKDIG-KDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDK 148 (782)
Q Consensus 98 --~~~~~L~i~V~d~d~~-~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~ 148 (782)
.....|.|+|||++.. +|++||++.++|.++..+. ....|++|+.+
T Consensus 93 ~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~-----~~~~~~~L~~p 141 (142)
T 2chd_A 93 EDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQ-----RKNFNICLERV 141 (142)
T ss_dssp HHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTC-----CEEEEEECBCC
T ss_pred HHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCC-----ccEEEEecccC
Confidence 2246899999999998 8999999999999998653 35678888764
No 57
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.71 E-value=5.3e-17 Score=151.59 Aligned_cols=118 Identities=23% Similarity=0.301 Sum_probs=100.3
Q ss_pred cccceEEEEEEeccCccccCCCcccCCCCCccccccccCceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEECC----
Q 003975 326 KFSSKILISFCLEAGYHVFDESTHFSSDLQTSSKSLRKGSIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYGN---- 400 (782)
Q Consensus 326 ~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~---- 400 (782)
...|+|.+++.+. +..+.|.|+|++|+||+.++. .|. ||||++++++
T Consensus 13 ~~~G~l~~~l~y~-------------------------~~~~~L~V~v~~a~~L~~~d~---~g~~dpyv~v~~~~~~~~ 64 (142)
T 2chd_A 13 TTLGALEFSLLYD-------------------------QDNSNLQCTIIRAKGLKPMDS---NGLADPYVKLHLLPGASK 64 (142)
T ss_dssp -CCCEEEEEEEEE-------------------------GGGTEEEEEEEEEESCCCCCT---TSCCCEEEEEEEESCCSG
T ss_pred CccceEEEEEEEe-------------------------CCCCEEEEEEEEecCCCCCCC---CCCCCCEEEEEEEcCCCC
Confidence 4569999988763 345799999999999998864 366 9999999965
Q ss_pred -EEEeecccCCCCCCeeccEEEEE-eeCC---CceEEEEEEeCCcCCCCCCCCCCCccEEEEEEcccccCCceEEEEEee
Q 003975 401 -KWIRTRTILDTLAPRWNEQYTWD-VYDP---CTVITIGVFDNCYVNGSKDDAKDQRIGKVRIRLSTLETDRIYTHYYPL 475 (782)
Q Consensus 401 -~~~rT~~~~~t~~P~wne~~~f~-v~~~---~~~l~i~v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L 475 (782)
..+||+++++++||+|||.|.|. +... ...|.|+|||++.++ +|++||++.|+|+++..++....|++|
T Consensus 65 ~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~------~d~~iG~~~i~l~~l~~~~~~~~~~~L 138 (142)
T 2chd_A 65 SNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDKFG------HNEFIGETRFSLKKLKANQRKNFNICL 138 (142)
T ss_dssp GGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEECTTS------CEEEEEEEEEEGGGCCTTCCEEEEEEC
T ss_pred cceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEECCCCC------CCcEEEEEEEEHHHcCCCCccEEEEec
Confidence 68999999999999999999998 5422 368999999999876 789999999999999988888888888
Q ss_pred ee
Q 003975 476 LL 477 (782)
Q Consensus 476 ~~ 477 (782)
..
T Consensus 139 ~~ 140 (142)
T 2chd_A 139 ER 140 (142)
T ss_dssp BC
T ss_pred cc
Confidence 63
No 58
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.70 E-value=4.8e-17 Score=152.85 Aligned_cols=121 Identities=16% Similarity=0.130 Sum_probs=100.6
Q ss_pred cccceEEEEEEeccCccccCCCcccCCCCCccccccccCceeEEEEEEEEeecCCCC-ccC---CCCCC-CcEEEEEEC-
Q 003975 326 KFSSKILISFCLEAGYHVFDESTHFSSDLQTSSKSLRKGSIGTLELGILSAKNLMQM-KSK---DGKLT-DAYCVAKYG- 399 (782)
Q Consensus 326 ~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~-~~~---~~~~~-dpyv~v~~~- 399 (782)
...|+|.+++++. +..|.|.|+|++|+||+.. +.. +..+. ||||+|++.
T Consensus 10 ~~~G~l~~~l~y~-------------------------~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~ 64 (147)
T 2enp_A 10 YQLGMLHFSTQYD-------------------------LLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLP 64 (147)
T ss_dssp CCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEET
T ss_pred CcceEEEEEEEEc-------------------------CCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEe
Confidence 4569999999873 3457999999999999984 431 11245 999999995
Q ss_pred --CEEEeecccCCCCCCeeccEEEEEeeCC---CceEEEEEEeCCcCCCCCCCCCCCccEEEEEEcccccCCceEEEEEe
Q 003975 400 --NKWIRTRTILDTLAPRWNEQYTWDVYDP---CTVITIGVFDNCYVNGSKDDAKDQRIGKVRIRLSTLETDRIYTHYYP 474 (782)
Q Consensus 400 --~~~~rT~~~~~t~~P~wne~~~f~v~~~---~~~l~i~v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~ 474 (782)
.+.+||+++++++||+|||.|.|.+... ...|.|+|||++.++ +|++||++.|+|.++..+.....|++
T Consensus 65 ~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~------~~~~iG~~~i~l~~l~~~~~~~~w~~ 138 (147)
T 2enp_A 65 DQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDKFS------RHCVIGKVSVPLCEVDLVKGGHWWKA 138 (147)
T ss_dssp CCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEEEECCSTTC------CSCCCEEEEEETTTSCTTTCCCEEEC
T ss_pred CCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEEEEECCCCc------CCcEEEEEEEechhcCCCCCccEEEE
Confidence 3578999999999999999999998642 358999999999876 88999999999999987776788999
Q ss_pred eee
Q 003975 475 LLL 477 (782)
Q Consensus 475 L~~ 477 (782)
|..
T Consensus 139 L~~ 141 (147)
T 2enp_A 139 LIP 141 (147)
T ss_dssp CBC
T ss_pred eec
Confidence 985
No 59
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.70 E-value=5.9e-17 Score=152.58 Aligned_cols=114 Identities=32% Similarity=0.498 Sum_probs=97.4
Q ss_pred CCCceeeeeccccceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC-----eEeeeccccCCCCCccccEEEEEeccC-
Q 003975 25 GGDKTASTYDLVELMHYLCVNVVKARNLPVMDVSGSLDPYVEVKLGN-----YKGITKHLEKNQNPVWNQIFAFSKERL- 98 (782)
Q Consensus 25 ~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~-----~~~kT~~i~~t~nP~Wne~f~f~~~~~- 98 (782)
|...++..|. .+.|.|+|++|++|+..|..|.+||||+|++++ .+++|+++++|.||+|||+|.|.+...
T Consensus 20 G~l~~~l~~~----~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 95 (149)
T 1a25_A 20 GRIYIQAHID----REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESD 95 (149)
T ss_dssp CEEEEEEEES----SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGG
T ss_pred eEEEEEEEec----CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEecccc
Confidence 4445555552 478999999999999999999999999999973 578999999999999999999998642
Q ss_pred CCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCEEEEeccC
Q 003975 99 QSSLLEVTVKDKDIG-KDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDK 148 (782)
Q Consensus 99 ~~~~L~i~V~d~d~~-~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~ 148 (782)
....|.|+|||++.. +|++||++.++|.++.... ..+||+|.+.
T Consensus 96 ~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~------~~~W~~L~~~ 140 (149)
T 1a25_A 96 KDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKAG------VDGWFKLLSQ 140 (149)
T ss_dssp GGCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTCC------EEEEEECBCH
T ss_pred CCCEEEEEEEECCCCCCCCEEEEEEEEHHHhCcCc------cCCeEEccCC
Confidence 246899999999998 8999999999999997642 6789999875
No 60
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.70 E-value=3.5e-17 Score=152.80 Aligned_cols=120 Identities=30% Similarity=0.365 Sum_probs=99.1
Q ss_pred cCCCceeeeeccccceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC-----eEeeeccccCCCCCccccEEEEEecc-
Q 003975 24 RGGDKTASTYDLVELMHYLCVNVVKARNLPVMDVSGSLDPYVEVKLGN-----YKGITKHLEKNQNPVWNQIFAFSKER- 97 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~-----~~~kT~~i~~t~nP~Wne~f~f~~~~- 97 (782)
.|...++..|+ +..+.|.|+|++|++|+.+|..| +||||++++.+ .+++|+++++|.||+|||+|.|.+..
T Consensus 10 ~G~l~~~l~y~--~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 86 (142)
T 2dmg_A 10 LGQIQLTIRHS--SQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLP 86 (142)
T ss_dssp SCEEEEEEEEE--TTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHH
T ss_pred cceEEEEEEEe--CCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHH
Confidence 35556666664 46789999999999999999888 99999999942 57899999999999999999999853
Q ss_pred -CCCCeEEEEEEeCCCC-C--CceeEEEEEEccccCCCCCCCCCCCCEEEEeccCCCC
Q 003975 98 -LQSSLLEVTVKDKDIG-K--DDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKKGD 151 (782)
Q Consensus 98 -~~~~~L~i~V~d~d~~-~--d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~g~ 151 (782)
.....|.|+|||++.. + +++||++.++|.++.... ...+||+|.+..+.
T Consensus 87 ~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~-----~~~~W~~L~~~~~~ 139 (142)
T 2dmg_A 87 EVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAK-----GWTQWYDLTEDSGP 139 (142)
T ss_dssp HHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTT-----CBCCBCCCBCSCSC
T ss_pred HhCcCEEEEEEEECCCccccCCcEEEEEEEecccccccc-----cccceeeccCCCCC
Confidence 2346899999999986 3 479999999999987643 36789999986544
No 61
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.70 E-value=1.9e-17 Score=154.69 Aligned_cols=115 Identities=22% Similarity=0.340 Sum_probs=98.7
Q ss_pred ccceEEEEEEeccCccccCCCcccCCCCCccccccccCceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEECCE----
Q 003975 327 FSSKILISFCLEAGYHVFDESTHFSSDLQTSSKSLRKGSIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYGNK---- 401 (782)
Q Consensus 327 ~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~~---- 401 (782)
..|+|.+++.+. .|.|.|+|++|+||+++|.. |. ||||++++++.
T Consensus 5 ~~G~i~~~l~y~---------------------------~~~L~V~v~~a~~L~~~d~~---g~~Dpyv~v~~~~~~~~~ 54 (142)
T 1rh8_A 5 ITGEIQLQINYD---------------------------LGNLIIHILQARNLVPRDNN---GYSDPFVKVYLLPGRGQV 54 (142)
T ss_dssp CCCEEEEEEEEE---------------------------TTEEEEEEEEEESCCCCSSS---SCSCCEEEEEETTSSCCC
T ss_pred cceEEEEEEEEc---------------------------CCEEEEEEEEecCCCCCCCC---CCCCceEEEEEecCCCcc
Confidence 469999998763 26999999999999998643 66 99999999752
Q ss_pred ----------EEeecccCCCCCCeeccEEEEE-eeC---CCceEEEEEEeCCcCCCCCCCCCCCccEEEEEEcccccCCc
Q 003975 402 ----------WIRTRTILDTLAPRWNEQYTWD-VYD---PCTVITIGVFDNCYVNGSKDDAKDQRIGKVRIRLSTLETDR 467 (782)
Q Consensus 402 ----------~~rT~~~~~t~~P~wne~~~f~-v~~---~~~~l~i~v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~ 467 (782)
.+||+++++|+||+|||.|.|. +.. ....|.|+|||++.++ +|++||++.|+|+++..+.
T Consensus 55 ~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~~l~i~V~d~d~~~------~~~~lG~~~i~l~~l~~~~ 128 (142)
T 1rh8_A 55 MVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDRFS------SNDFLGEVLIDLSSTSHLD 128 (142)
T ss_dssp EECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTCEEEEEEEEECSSS------CEEEEEEEEEETTSCGGGT
T ss_pred cccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCCEEEEEEEECCCCC------CCceEEEEEEeccccccCC
Confidence 5899999999999999999997 542 3579999999999876 8999999999999998777
Q ss_pred eEEEEEeeee
Q 003975 468 IYTHYYPLLL 477 (782)
Q Consensus 468 ~~~~w~~L~~ 477 (782)
...+||+|..
T Consensus 129 ~~~~W~~L~~ 138 (142)
T 1rh8_A 129 NTPRWYPLKE 138 (142)
T ss_dssp TCCEEEECBC
T ss_pred CCCeEEECCc
Confidence 7789999985
No 62
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.70 E-value=4.6e-17 Score=156.93 Aligned_cols=115 Identities=26% Similarity=0.340 Sum_probs=98.1
Q ss_pred CCCceeeeeccccceeEEEEEEEEeeCCCCCCC-CCCCCcEEEEEECC-----eEeeeccccCCCCCccccEEEEEeccC
Q 003975 25 GGDKTASTYDLVELMHYLCVNVVKARNLPVMDV-SGSLDPYVEVKLGN-----YKGITKHLEKNQNPVWNQIFAFSKERL 98 (782)
Q Consensus 25 ~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~-~g~~dPyv~v~~~~-----~~~kT~~i~~t~nP~Wne~f~f~~~~~ 98 (782)
|...++..| ..+.|.|+|++|++|+.+|. .|.+||||+|++.+ .+++|+++++|.||+|||+|.|.+..
T Consensus 19 G~l~~~l~y----~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~- 93 (171)
T 2q3x_A 19 GDIQIGMED----KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP- 93 (171)
T ss_dssp CEEEEEEEE----ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC-
T ss_pred cEEEEEEEE----CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC-
Confidence 555666666 46899999999999999996 79999999999964 37899999999999999999999854
Q ss_pred CCCeEEEEEE-eCCCC-CCceeEEEEEEccccCCCCCCCCCCCCEEEEeccCC
Q 003975 99 QSSLLEVTVK-DKDIG-KDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKK 149 (782)
Q Consensus 99 ~~~~L~i~V~-d~d~~-~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~ 149 (782)
....|.|+|| |+|.. +|++||++.++|.++..+. ...+||+|....
T Consensus 94 ~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~~ 141 (171)
T 2q3x_A 94 QGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSS-----MVIGWYKLFPPS 141 (171)
T ss_dssp TTEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTS-----CEEEEEECBCGG
T ss_pred CCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCC-----CcceeEECCCcc
Confidence 4688999999 99998 8999999999999997543 367999998764
No 63
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.70 E-value=1.8e-16 Score=152.15 Aligned_cols=118 Identities=22% Similarity=0.303 Sum_probs=98.6
Q ss_pred cccceEEEEEEeccCccccCCCcccCCCCCccccccccCceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEECC----
Q 003975 326 KFSSKILISFCLEAGYHVFDESTHFSSDLQTSSKSLRKGSIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYGN---- 400 (782)
Q Consensus 326 ~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~---- 400 (782)
...|+|.+++.+. +..|.|.|.|++|+||+.++.. |. ||||++++++
T Consensus 21 ~~~G~l~~~l~y~-------------------------~~~~~L~V~v~~a~~L~~~d~~---g~~DPyv~v~l~~~~~~ 72 (166)
T 2cm5_A 21 EERGKILVSLMYS-------------------------TQQGGLIVGIIRCVHLAAMDAN---GYSDPFVKLWLKPDMGK 72 (166)
T ss_dssp CCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCCSTT---SCCCEEEEEEEETC---
T ss_pred CccceEEEEEEEE-------------------------CCCCEEEEEEEEeECCCCccCC---CCCCcEEEEEEECCCCc
Confidence 4569999998862 3457999999999999988643 66 9999999965
Q ss_pred -EEEeecccCCCCCCeeccEEEEEeeCC---CceEEEEEEeCCcCCCCCCCCCCCccEEEEEEccccc------------
Q 003975 401 -KWIRTRTILDTLAPRWNEQYTWDVYDP---CTVITIGVFDNCYVNGSKDDAKDQRIGKVRIRLSTLE------------ 464 (782)
Q Consensus 401 -~~~rT~~~~~t~~P~wne~~~f~v~~~---~~~l~i~v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~------------ 464 (782)
..+||+++++|+||+|||.|.|.+... ...|.|+|||++.++ +|++||++.|+|.++.
T Consensus 73 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~------~~~~iG~~~i~l~~~~~~~~~W~~l~~~ 146 (166)
T 2cm5_A 73 KAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGK------SNDYIGGCQLGISAKGERLKHWYECLKN 146 (166)
T ss_dssp CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSS------CCEEEEEEEEETTCCHHHHHHHHHHHHC
T ss_pred cceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECCCCC------CCcEEEeEEEecccCCchhHHHHHHHhC
Confidence 689999999999999999999999753 459999999999876 8999999999999852
Q ss_pred CCceEEEEEeeee
Q 003975 465 TDRIYTHYYPLLL 477 (782)
Q Consensus 465 ~~~~~~~w~~L~~ 477 (782)
.++...+|++|..
T Consensus 147 ~~~~~~~Wh~L~~ 159 (166)
T 2cm5_A 147 KDKKIERWHQLQN 159 (166)
T ss_dssp TTCCEEEEEECBC
T ss_pred CCCcceEeeECCC
Confidence 3556677777764
No 64
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.69 E-value=1.1e-16 Score=148.76 Aligned_cols=120 Identities=26% Similarity=0.302 Sum_probs=98.8
Q ss_pred cCCCceeeeeccccceeEEEEEEEEeeCCCCCCCC-CCCCcEEEEEECC---eEeeeccccCCCCCccccEEEEE-ecc-
Q 003975 24 RGGDKTASTYDLVELMHYLCVNVVKARNLPVMDVS-GSLDPYVEVKLGN---YKGITKHLEKNQNPVWNQIFAFS-KER- 97 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~-g~~dPyv~v~~~~---~~~kT~~i~~t~nP~Wne~f~f~-~~~- 97 (782)
.|...++..|+ +..+.|.|+|++|++|+.+|.. |.+||||++++.+ ++++|+++++|.||+|||+|.|. +..
T Consensus 8 ~G~l~~~l~y~--~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~ 85 (138)
T 1ugk_A 8 LGTLFFSLEYN--FERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYT 85 (138)
T ss_dssp CCEEEEEEEEE--GGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCST
T ss_pred cEEEEEEEEEE--CCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHH
Confidence 35555666655 4678999999999999999985 8999999999963 68999999999999999999995 542
Q ss_pred -CCCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCEEEEeccCC
Q 003975 98 -LQSSLLEVTVKDKDIG-KDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKK 149 (782)
Q Consensus 98 -~~~~~L~i~V~d~d~~-~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~ 149 (782)
.....|.|+|||++.+ +|++||++.++|.++..... ....|++|....
T Consensus 86 ~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~----~~~~~~~l~~~~ 135 (138)
T 1ugk_A 86 QIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEG----KMLMNREIISGP 135 (138)
T ss_dssp TGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTC----CEEEEEECBSSS
T ss_pred HhccCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCC----cchhhhhhhcCC
Confidence 2357899999999998 89999999999999976532 235679998754
No 65
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.68 E-value=1.5e-16 Score=151.52 Aligned_cols=121 Identities=30% Similarity=0.360 Sum_probs=97.7
Q ss_pred cCCCceeeeeccccceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC-----eEeeeccccCCCCCccccEEEEEecc-
Q 003975 24 RGGDKTASTYDLVELMHYLCVNVVKARNLPVMDVSGSLDPYVEVKLGN-----YKGITKHLEKNQNPVWNQIFAFSKER- 97 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~-----~~~kT~~i~~t~nP~Wne~f~f~~~~- 97 (782)
.|...+++.|. +..+.|.|+|++|++|+..|..|.+||||++++++ .+++|+++++|.||+|||+|.|.+..
T Consensus 11 ~G~l~~~l~y~--~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 88 (159)
T 1tjx_A 11 LGDICFSLRYV--PTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFE 88 (159)
T ss_dssp CCEEEEEEEEE--TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGG
T ss_pred CCeEEEEEEEc--CCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHH
Confidence 45455555554 46789999999999999999999999999999953 46899999999999999999999853
Q ss_pred -CCCCeEEEEEEeCCCC-CCceeEEEEEEcccc----------CCCCCCCCCCCCEEEEeccCC
Q 003975 98 -LQSSLLEVTVKDKDIG-KDDFVGRVSLDLSQV----------PLRVPPDSPLAPQWYRLEDKK 149 (782)
Q Consensus 98 -~~~~~L~i~V~d~d~~-~d~~lG~~~v~l~~l----------~~~~~~~~~~~~~w~~L~~~~ 149 (782)
.....|.|+|||++.. +|++||++.+++..+ .... .....+||+|....
T Consensus 89 ~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~---~~~~~~W~~L~~~~ 149 (159)
T 1tjx_A 89 QIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANP---RRPIAQWHTLQVEE 149 (159)
T ss_dssp GGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHST---TCCEEEEEECBCHH
T ss_pred HhCCcEEEEEEEECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCC---CCeeeeEEECcCcc
Confidence 2356899999999998 899999999999854 2211 12356899997643
No 66
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.67 E-value=3.2e-16 Score=150.43 Aligned_cols=103 Identities=28% Similarity=0.414 Sum_probs=89.1
Q ss_pred CCCceeeeeccccceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC-----eEeeeccccCCCCCccccEEEEEecc--
Q 003975 25 GGDKTASTYDLVELMHYLCVNVVKARNLPVMDVSGSLDPYVEVKLGN-----YKGITKHLEKNQNPVWNQIFAFSKER-- 97 (782)
Q Consensus 25 ~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~-----~~~kT~~i~~t~nP~Wne~f~f~~~~-- 97 (782)
|...+++. +.+..+.|.|+|++|++|+..|..|.+||||++++++ .+++|+++++|.||+|||+|.|.+..
T Consensus 24 G~l~~~l~--y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 101 (166)
T 2cm5_A 24 GKILVSLM--YSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSD 101 (166)
T ss_dssp CEEEEEEE--EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGG
T ss_pred ceEEEEEE--EECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHh
Confidence 44445544 4557789999999999999999999999999999975 57899999999999999999999853
Q ss_pred CCCCeEEEEEEeCCCC-CCceeEEEEEEccccC
Q 003975 98 LQSSLLEVTVKDKDIG-KDDFVGRVSLDLSQVP 129 (782)
Q Consensus 98 ~~~~~L~i~V~d~d~~-~d~~lG~~~v~l~~l~ 129 (782)
+....|.|+|||++.. ++++||++.+++.++.
T Consensus 102 l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 102 LAKKSLDISVWDYDIGKSNDYIGGCQLGISAKG 134 (166)
T ss_dssp GGGCEEEEEEEECCSSSCCEEEEEEEEETTCCH
T ss_pred cCCCEEEEEEEECCCCCCCcEEEeEEEecccCC
Confidence 2356899999999998 8999999999999863
No 67
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.67 E-value=1.3e-16 Score=149.81 Aligned_cols=119 Identities=30% Similarity=0.348 Sum_probs=98.1
Q ss_pred cCCCceeeeeccccceeEEEEEEEEeeCCCCC-CC------CCCCCcEEEEEECC---eEeeeccccCCCCCccccEEEE
Q 003975 24 RGGDKTASTYDLVELMHYLCVNVVKARNLPVM-DV------SGSLDPYVEVKLGN---YKGITKHLEKNQNPVWNQIFAF 93 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~-d~------~g~~dPyv~v~~~~---~~~kT~~i~~t~nP~Wne~f~f 93 (782)
.|...+++.|+- ..+.|.|+|++|++|+.. |. .|.+||||+|++.+ ++++|+++++|.||+|||+|.|
T Consensus 12 ~G~l~~~l~y~~--~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f 89 (147)
T 2enp_A 12 LGMLHFSTQYDL--LHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTF 89 (147)
T ss_dssp CCEEEEEEEEET--TTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEE
T ss_pred ceEEEEEEEEcC--CCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEE
Confidence 455666666654 668999999999999984 43 35899999999963 5789999999999999999999
Q ss_pred Eecc--CCCCeEEEEEEeCCCC-CCceeEEEEEEccccCCCCCCCCCCCCEEEEeccCC
Q 003975 94 SKER--LQSSLLEVTVKDKDIG-KDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKK 149 (782)
Q Consensus 94 ~~~~--~~~~~L~i~V~d~d~~-~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~ 149 (782)
.+.. .....|.|+|||++.+ ++++||++.++|.++.... ....|+.|....
T Consensus 90 ~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~w~~L~~~~ 143 (147)
T 2enp_A 90 EIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVK-----GGHWWKALIPSG 143 (147)
T ss_dssp CCCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTT-----CCCEEECCBCCC
T ss_pred EeChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCC-----CccEEEEeecCC
Confidence 9853 2346899999999998 8999999999999997643 246899998753
No 68
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.67 E-value=5.3e-16 Score=146.76 Aligned_cols=115 Identities=18% Similarity=0.238 Sum_probs=88.2
Q ss_pred cccceEEEEEEeccCccccCCCcccCCCCCccccccccCceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEE--CCE-
Q 003975 326 KFSSKILISFCLEAGYHVFDESTHFSSDLQTSSKSLRKGSIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKY--GNK- 401 (782)
Q Consensus 326 ~~~G~i~l~i~~~~~~~~~d~~~~~~~d~~~~~~~~~~~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~--~~~- 401 (782)
...|+|.+++.+. +..+.|.|.|++|+||+.++.. |. ||||+|++ ++.
T Consensus 14 ~~~G~l~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~d~~---g~~dpyv~v~~~~~~~~ 65 (153)
T 1w15_A 14 SGRGELLVSLCYQ-------------------------STTNTLTVVVLKARHLPKSDVS---GLSDPYVKVNLYHAKKR 65 (153)
T ss_dssp --CCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCC---------CCCEEEEEEEEETTEE
T ss_pred ccccEEEEEEEEc-------------------------CCCCEEEEEEEEeECCCCcCCC---CCCCeEEEEEEEeCCeE
Confidence 4569999998863 3357999999999999988643 56 99999999 443
Q ss_pred --EEeecccCCCCCCeeccEEEEEeeCC---CceEEEEEEeCCcCCCCCCCCCCCccEEEEEEcccccCCceEEEEEeee
Q 003975 402 --WIRTRTILDTLAPRWNEQYTWDVYDP---CTVITIGVFDNCYVNGSKDDAKDQRIGKVRIRLSTLETDRIYTHYYPLL 476 (782)
Q Consensus 402 --~~rT~~~~~t~~P~wne~~~f~v~~~---~~~l~i~v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~ 476 (782)
.+||+++++|+||+|||.|.|.+... ...|.|+|||++.++ +|++||++.|+|+.. +....+||+|.
T Consensus 66 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d~~~------~~~~lG~~~i~l~~~--~~~~~~W~~l~ 137 (153)
T 1w15_A 66 ISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSERGS------RNEVIGRLVLGATAE--GSGGGHWKEIC 137 (153)
T ss_dssp EEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECCTTS------CCEEEEEEEESTTCC--SHHHHHHHHHH
T ss_pred eceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCCCCC------CCcEEEEEEECCCCC--chHHHHHHHHH
Confidence 68999999999999999999998764 368999999999876 899999999999983 22234444443
No 69
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.67 E-value=2.4e-16 Score=149.13 Aligned_cols=102 Identities=34% Similarity=0.484 Sum_probs=81.7
Q ss_pred cCCCceeeeeccccceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEE--CCe---EeeeccccCCCCCccccEEEEEeccC
Q 003975 24 RGGDKTASTYDLVELMHYLCVNVVKARNLPVMDVSGSLDPYVEVKL--GNY---KGITKHLEKNQNPVWNQIFAFSKERL 98 (782)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~--~~~---~~kT~~i~~t~nP~Wne~f~f~~~~~ 98 (782)
.|...++..| .+..+.|.|+|++|++|+..|..|.+||||+|++ ++. +++|+++++|+||+|||+|.|.+...
T Consensus 16 ~G~l~~~l~y--~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 93 (153)
T 1w15_A 16 RGELLVSLCY--QSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCE 93 (153)
T ss_dssp CCEEEEEEEE--ETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSS
T ss_pred ccEEEEEEEE--cCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHH
Confidence 3444555554 4467899999999999999998999999999999 443 67999999999999999999998643
Q ss_pred --CCCeEEEEEEeCCCC-CCceeEEEEEEccc
Q 003975 99 --QSSLLEVTVKDKDIG-KDDFVGRVSLDLSQ 127 (782)
Q Consensus 99 --~~~~L~i~V~d~d~~-~d~~lG~~~v~l~~ 127 (782)
....|.|+|||++.. ++++||++.+++.+
T Consensus 94 ~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 94 SLEEISVEFLVLDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp SSTTEEEEEEEEECCTTSCCEEEEEEEESTTC
T ss_pred HhCceEEEEEEEeCCCCCCCcEEEEEEECCCC
Confidence 347899999999998 89999999999988
No 70
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.67 E-value=2.1e-16 Score=146.79 Aligned_cols=103 Identities=35% Similarity=0.519 Sum_probs=88.7
Q ss_pred CCCceeeeeccccceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC-----eEeeeccccCCCCCccccEEEEEeccC-
Q 003975 25 GGDKTASTYDLVELMHYLCVNVVKARNLPVMDVSGSLDPYVEVKLGN-----YKGITKHLEKNQNPVWNQIFAFSKERL- 98 (782)
Q Consensus 25 ~~~~~~~~~~~~~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~-----~~~kT~~i~~t~nP~Wne~f~f~~~~~- 98 (782)
|...++..|+ +..+.|.|+|++|++|+..|..|.+||||++++++ .+++|+++++|.||+|||+|.|.+...
T Consensus 3 G~l~~sl~y~--~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~ 80 (138)
T 3n5a_A 3 GELLLSLCYN--PSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEK 80 (138)
T ss_dssp CEEEEEEEEE--TTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGG
T ss_pred cEEEEEEEEc--CCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhh
Confidence 4455666555 46789999999999999999999999999999964 478999999999999999999998642
Q ss_pred -CCCeEEEEEEeCCCC-CCceeEEEEEEccccC
Q 003975 99 -QSSLLEVTVKDKDIG-KDDFVGRVSLDLSQVP 129 (782)
Q Consensus 99 -~~~~L~i~V~d~d~~-~d~~lG~~~v~l~~l~ 129 (782)
....|.|+|||++.. +|++||++.+++.++.
T Consensus 81 l~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 81 LRETTIIITVMDKDKLSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp GGGEEEEEEEEECCSSSCCEEEEEEEESSSSCH
T ss_pred cCceEEEEEEEECCCCCCCcEEEEEEEccccCC
Confidence 346899999999998 9999999999998753
No 71
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.62 E-value=2.3e-15 Score=137.90 Aligned_cols=115 Identities=20% Similarity=0.285 Sum_probs=84.8
Q ss_pred eeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEECCEEEeecccC-CCCCCeeccEEEEEeeCCCceEEEEEEeCCcCCC
Q 003975 366 IGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYGNKWIRTRTIL-DTLAPRWNEQYTWDVYDPCTVITIGVFDNCYVNG 443 (782)
Q Consensus 366 ~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~~~~rT~~~~-~t~~P~wne~~~f~v~~~~~~l~i~v~d~~~~~~ 443 (782)
.|.|.|+|++|++|+. .|. ||||+++ ++..+|++++ ++.||+|||.|.|.+.++...|.|+|||++ ++
T Consensus 4 ~~~L~V~V~~A~~l~~------~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~- 73 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA------QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LI- 73 (131)
T ss_dssp CEEEEEEEEEEECSSC------GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SS-
T ss_pred ceEEEEEEEEeECCCC------CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CC-
Confidence 4799999999998852 255 9999999 3345666665 699999999999999988789999999999 76
Q ss_pred CCCCCCCCccEEEEEEcccccCCc--eEEEEEeeeec----CC--CCCC--cCcEEEEEEEE
Q 003975 444 SKDDAKDQRIGKVRIRLSTLETDR--IYTHYYPLLLL----TP--SGLK--NNGELHLALRF 495 (782)
Q Consensus 444 ~~~~~~d~~lG~~~i~l~~l~~~~--~~~~w~~L~~~----~~--~g~~--~~G~i~l~~~~ 495 (782)
+|++||++.|+|+++.... ....|.++... .. .|.. ..+.+.+.++|
T Consensus 74 -----~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~ 130 (131)
T 2cjt_A 74 -----WDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHF 130 (131)
T ss_dssp -----CEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEE
T ss_pred -----CCCeEEEEEEEHHHhhhcCCCCccccEEcccccccCCCcCcceECCCccEEEEEEEe
Confidence 8999999999999986432 12245555421 11 1211 14557777776
No 72
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.61 E-value=1.2e-15 Score=139.63 Aligned_cols=87 Identities=30% Similarity=0.418 Sum_probs=73.2
Q ss_pred ceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECCeEeeecccc-CCCCCccccEEEEEeccCCCCeEEEEEEeCCCC-CC
Q 003975 38 LMHYLCVNVVKARNLPVMDVSGSLDPYVEVKLGNYKGITKHLE-KNQNPVWNQIFAFSKERLQSSLLEVTVKDKDIG-KD 115 (782)
Q Consensus 38 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~kT~~i~-~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~d~~-~d 115 (782)
.++.|.|+|++|++|+. .|.+||||+++ ++..+|+++. +|.||+|||+|.|.+.+. ...|.|+|||+| . +|
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~~~d 75 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-LIWD 75 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCC-SSEEEEEEEECC-SSCE
T ss_pred cceEEEEEEEEeECCCC---CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCC-CCeEEEEEEECC-CCCC
Confidence 36799999999998853 68899999999 3334455554 799999999999999864 567999999999 7 99
Q ss_pred ceeEEEEEEccccCCC
Q 003975 116 DFVGRVSLDLSQVPLR 131 (782)
Q Consensus 116 ~~lG~~~v~l~~l~~~ 131 (782)
++||++.++|.++...
T Consensus 76 d~iG~~~i~l~~l~~~ 91 (131)
T 2cjt_A 76 TMVGTVWIPLRTIRQS 91 (131)
T ss_dssp EEEEEEEEEGGGSCBC
T ss_pred CeEEEEEEEHHHhhhc
Confidence 9999999999998754
No 73
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.61 E-value=2.4e-15 Score=134.99 Aligned_cols=116 Identities=16% Similarity=0.180 Sum_probs=101.4
Q ss_pred EEEEEEEEeeCCCCCCCCCCCCcEEEEEECCeEeeecccc-CCCCCccccEEEEEecc--CCCCeEEEEEEeCCCC-CCc
Q 003975 41 YLCVNVVKARNLPVMDVSGSLDPYVEVKLGNYKGITKHLE-KNQNPVWNQIFAFSKER--LQSSLLEVTVKDKDIG-KDD 116 (782)
Q Consensus 41 ~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~kT~~i~-~t~nP~Wne~f~f~~~~--~~~~~L~i~V~d~d~~-~d~ 116 (782)
-|+|+|.+|.+|+ |++|||+++.+.+.+++|++++ ++.||+|||.|.|++.. .....|.|.|||++.+ +++
T Consensus 22 sL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~~nr 96 (144)
T 3l9b_A 22 ALIVHLKTVSELR-----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVFSNK 96 (144)
T ss_dssp EEEEEEEEEESCC-----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTSCCE
T ss_pred EEEEEEEEecCCC-----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccccCCC
Confidence 4899999999998 5789999999999999999998 69999999999999863 3578999999999999 999
Q ss_pred eeEEEEEEccccCCCCCCCCCCCCEEEEeccCCCCcccceEEEEEEEeccc
Q 003975 117 FVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKKGDQTTKGEIMLAVWMGTQ 167 (782)
Q Consensus 117 ~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~g~~~~~G~l~l~~~~~~~ 167 (782)
+||++.++|+++..... ...+.+|.+.++.. ..|+|.+++.|.+.
T Consensus 97 lIG~~~i~Lq~lv~~~~-----l~l~~~LvD~n~~~-~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 97 LIGTFRMVLQKVVEENR-----VEVSDTLIDDNNAI-IKTSLSMEVRYQAA 141 (144)
T ss_dssp EEEEEEEESHHHHHHSE-----EEEEEEEECTTSCE-EEEEEEEEEEEEET
T ss_pred EEEEEEEEhHHhccCCe-----EEEeecccCCCCCc-cccEEEEEEEecCC
Confidence 99999999999987542 33567888888776 66999999999863
No 74
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.59 E-value=1e-14 Score=130.95 Aligned_cols=117 Identities=15% Similarity=0.219 Sum_probs=101.4
Q ss_pred eEEEEEEEEeecCCCCccCCCCCC-CcEEEEEECCEEEeecccC-CCCCCeeccEEEEEeeC---CCceEEEEEEeCCcC
Q 003975 367 GTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYGNKWIRTRTIL-DTLAPRWNEQYTWDVYD---PCTVITIGVFDNCYV 441 (782)
Q Consensus 367 g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~~~~rT~~~~-~t~~P~wne~~~f~v~~---~~~~l~i~v~d~~~~ 441 (782)
-.|+|.|.+|.||+ |+ |||+++.+-+.+++|+++. .+.||+|||.|+|++.- .+..|.|.|+|++.+
T Consensus 21 msL~V~l~~a~~Lp--------g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v 92 (144)
T 3l9b_A 21 MALIVHLKTVSELR--------GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKV 92 (144)
T ss_dssp EEEEEEEEEEESCC--------SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTT
T ss_pred EEEEEEEEEecCCC--------CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccc
Confidence 37999999999998 46 9999999999999999998 59999999999999974 467999999999998
Q ss_pred CCCCCCCCCCccEEEEEEcccccCCceEEEEEeeeecCCCCCCcCcEEEEEEEEEEcc
Q 003975 442 NGSKDDAKDQRIGKVRIRLSTLETDRIYTHYYPLLLLTPSGLKNNGELHLALRFTCTA 499 (782)
Q Consensus 442 ~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~g~~~~G~i~l~~~~~~~~ 499 (782)
+ ++.+||++.|+|.++..+.....+-+|.+...+ .-.++|.++++|++..
T Consensus 93 ~------~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~--~~~a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 93 F------SNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNA--IIKTSLSMEVRYQAAD 142 (144)
T ss_dssp S------CCEEEEEEEEESHHHHHHSEEEEEEEEECTTSC--EEEEEEEEEEEEEETT
T ss_pred c------CCCEEEEEEEEhHHhccCCeEEEeecccCCCCC--ccccEEEEEEEecCCC
Confidence 7 899999999999999888877778888764432 2248899999987754
No 75
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.57 E-value=7.1e-15 Score=140.16 Aligned_cols=120 Identities=23% Similarity=0.285 Sum_probs=89.5
Q ss_pred ceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECCeEeeecccc-CCCCCccccEEEEEeccCCCCeEEEEEEeCCCC-CC
Q 003975 38 LMHYLCVNVVKARNLPVMDVSGSLDPYVEVKLGNYKGITKHLE-KNQNPVWNQIFAFSKERLQSSLLEVTVKDKDIG-KD 115 (782)
Q Consensus 38 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~kT~~i~-~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~d~~-~d 115 (782)
.++.|.|+|++|++|+ ..|.+||||+++ ++..+|+++. +|.||+|||+|.|.+.+. ...|.|+|||+| . +|
T Consensus 12 ~~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~~~d 84 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDG---AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-LIWD 84 (167)
T ss_dssp CCCEEEEEEEEEECSS---CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCT-TSEEEEEEEECC-SSCC
T ss_pred ceEEEEEEEEEEECCC---CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCC-CCEEEEEEEECC-CCCC
Confidence 3679999999999884 268899999999 3345666665 689999999999999864 567999999999 6 99
Q ss_pred ceeEEEEEEccccCCCCCCCC--CCCCEEEEeccCCCCc-----ccceEEEEEEEec
Q 003975 116 DFVGRVSLDLSQVPLRVPPDS--PLAPQWYRLEDKKGDQ-----TTKGEIMLAVWMG 165 (782)
Q Consensus 116 ~~lG~~~v~l~~l~~~~~~~~--~~~~~w~~L~~~~g~~-----~~~G~l~l~~~~~ 165 (782)
++||++.|+|.++.... .+. ...+.|+.+....|.. ...|.+++.+++.
T Consensus 85 d~iG~~~i~L~~l~~~~-~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e 140 (167)
T 2cjs_A 85 TMVGTVWIPLRTIRQSN-EEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFE 140 (167)
T ss_dssp EEEEEEEEEGGGSCBCS-SCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEE
T ss_pred ceEEEEEEEHHHhcccC-cCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEee
Confidence 99999999999987543 121 1233455555444431 1345677777764
No 76
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.57 E-value=1.3e-14 Score=138.36 Aligned_cols=117 Identities=19% Similarity=0.272 Sum_probs=88.0
Q ss_pred ceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEECCEEEeecccC-CCCCCeeccEEEEEeeCCCceEEEEEEeCCcCC
Q 003975 365 SIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYGNKWIRTRTIL-DTLAPRWNEQYTWDVYDPCTVITIGVFDNCYVN 442 (782)
Q Consensus 365 ~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~~~~rT~~~~-~t~~P~wne~~~f~v~~~~~~l~i~v~d~~~~~ 442 (782)
..+.|+|+|++|++|+. .++ ||||+++ ++..||++++ ++.||+|||.|.|.+.++...|.|+|||+| ++
T Consensus 12 ~~~~L~V~V~~A~~l~~------~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~ 82 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDGA------QEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LI 82 (167)
T ss_dssp CCCEEEEEEEEEECSSC------GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SS
T ss_pred ceEEEEEEEEEEECCCC------CCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CC
Confidence 46799999999998852 255 9999999 3346777776 699999999999999988789999999999 66
Q ss_pred CCCCCCCCCccEEEEEEcccccCCc------eEEEEEeeeecCCC--CC--CcCcEEEEEEEEE
Q 003975 443 GSKDDAKDQRIGKVRIRLSTLETDR------IYTHYYPLLLLTPS--GL--KNNGELHLALRFT 496 (782)
Q Consensus 443 ~~~~~~~d~~lG~~~i~l~~l~~~~------~~~~w~~L~~~~~~--g~--~~~G~i~l~~~~~ 496 (782)
+|++||++.|+|+++.... ....||++.....+ |. ...|.++++++|.
T Consensus 83 ------~dd~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e 140 (167)
T 2cjs_A 83 ------WDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFE 140 (167)
T ss_dssp ------CCEEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEE
T ss_pred ------CCceEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEee
Confidence 8999999999999985432 34455554432211 11 1245677777763
No 77
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.57 E-value=2e-14 Score=161.27 Aligned_cols=112 Identities=18% Similarity=0.308 Sum_probs=96.7
Q ss_pred CceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEECCEEEeecccCCCCCCeeccEEEEEeeC--CCceEEEEEEeCCc
Q 003975 364 GSIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYGNKWIRTRTILDTLAPRWNEQYTWDVYD--PCTVITIGVFDNCY 440 (782)
Q Consensus 364 ~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~~~~rT~~~~~t~~P~wne~~~f~v~~--~~~~l~i~v~d~~~ 440 (782)
...|.|+|+|++|+||+. |.. |+ ||||+|+++++.+||+++++++||+|||.|.|.+.+ ....|.|+|||+|.
T Consensus 391 ~~~~~L~V~V~~A~~L~~-D~~---g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~ 466 (540)
T 3nsj_A 391 RGLAHLVVSNFRAEHLWG-DYT---TATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADY 466 (540)
T ss_dssp TTEEEEEEEEEEEESCCC-SSC---SCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCS
T ss_pred CcccEEEEEEEEccCCCc-ccC---CCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCC
Confidence 347899999999999997 643 56 999999999999999999999999999999998753 57799999999998
Q ss_pred CCCCCCCCCCCccEEEEEEcccccCCceEEEEEeeeecCCCCCCcCcEEEEEEEEEEc
Q 003975 441 VNGSKDDAKDQRIGKVRIRLSTLETDRIYTHYYPLLLLTPSGLKNNGELHLALRFTCT 498 (782)
Q Consensus 441 ~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~g~~~~G~i~l~~~~~~~ 498 (782)
++ +|++||++.++|.. + ....|.+|. .|.|++++.+++.
T Consensus 467 ~~------~dD~LG~~~~~L~~---g-~~~~~~~l~---------~G~l~~~~~~~c~ 505 (540)
T 3nsj_A 467 GW------DDDLLGSCDRSPHS---G-FHEVTCELN---------HGRVKFSYHAKCL 505 (540)
T ss_dssp SS------CCEEEEEEEECCCS---E-EEEEEEECS---------SSEEEEEEEEEEC
T ss_pred CC------CCCEEEEEEEEeeC---C-cEEEEEEcC---------CeEEEEEEEEEEC
Confidence 76 88999999999983 3 467898875 4999999887764
No 78
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.56 E-value=1.4e-14 Score=165.17 Aligned_cols=118 Identities=26% Similarity=0.439 Sum_probs=102.1
Q ss_pred CceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEECCEEEeecccCCCCCCeeccEEEEEeeCCC-ceEEEEEEeCCcC
Q 003975 364 GSIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYGNKWIRTRTILDTLAPRWNEQYTWDVYDPC-TVITIGVFDNCYV 441 (782)
Q Consensus 364 ~~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~~~~rT~~~~~t~~P~wne~~~f~v~~~~-~~l~i~v~d~~~~ 441 (782)
...|.|+|+|++|+||+++|.. |. ||||++.++++.++|+++++|+||+|||.|.|.+..+. ..|.|+|||+|.+
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~---~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~ 460 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPN---GKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQF 460 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTT---SCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSS
T ss_pred CCCceEEEEeceeecCCCCCCC---CCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCC
Confidence 4578999999999999988643 66 99999999999999999999999999999999998764 6899999999987
Q ss_pred CCCCCCCCCCccEEEEEEcccccCCce----EEEEEeeeecCCCCCCcCcEEEEEEEEE
Q 003975 442 NGSKDDAKDQRIGKVRIRLSTLETDRI----YTHYYPLLLLTPSGLKNNGELHLALRFT 496 (782)
Q Consensus 442 ~~~~~~~~d~~lG~~~i~l~~l~~~~~----~~~w~~L~~~~~~g~~~~G~i~l~~~~~ 496 (782)
+ +|++||++.++|+++..+.. ...|++|.. ...|+|+++++++
T Consensus 461 ~------~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~------~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 461 S------PDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHE------VPTGEVWVRFDLQ 507 (510)
T ss_dssp S------SCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBS------SSSCEEEEEEEEE
T ss_pred C------CCCceEEEEEEHHHhccccCCCCceeeeecCCC------CCCceEEEEEEEE
Confidence 6 89999999999999976543 678999964 2459999998874
No 79
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.55 E-value=1.3e-14 Score=165.29 Aligned_cols=123 Identities=24% Similarity=0.387 Sum_probs=105.4
Q ss_pred cceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECCeEeeeccccCCCCCccccEEEEEeccCCCCeEEEEEEeCCCC-CC
Q 003975 37 ELMHYLCVNVVKARNLPVMDVSGSLDPYVEVKLGNYKGITKHLEKNQNPVWNQIFAFSKERLQSSLLEVTVKDKDIG-KD 115 (782)
Q Consensus 37 ~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~kT~~i~~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~d~~-~d 115 (782)
...+.|.|+|++|++|+..|..|.+||||++.+++++++|+++++|+||+|||+|.|.+.......|.|+|||+|.. +|
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~~ 463 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSPD 463 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSSC
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCCC
Confidence 35689999999999999999999999999999999999999999999999999999999877778899999999998 89
Q ss_pred ceeEEEEEEccccCCCCCCCCCCCCEEEEeccCCCCcccceEEEEEEEec
Q 003975 116 DFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKKGDQTTKGEIMLAVWMG 165 (782)
Q Consensus 116 ~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~g~~~~~G~l~l~~~~~ 165 (782)
++||++.+++.++..+..... ....|++|.+. ..|+|.+.+.+.
T Consensus 464 d~lG~~~~~l~~l~~~~~~~~-~~~~~~~l~~~-----~~G~i~l~~~l~ 507 (510)
T 3jzy_A 464 DFLGRTEIPVAKIRTEQESKG-PMTRRLLLHEV-----PTGEVWVRFDLQ 507 (510)
T ss_dssp CEEEEEEEEHHHHHHHHHHHC-SCCEEEECBSS-----SSCEEEEEEEEE
T ss_pred CceEEEEEEHHHhccccCCCC-ceeeeecCCCC-----CCceEEEEEEEE
Confidence 999999999999975422111 25689999864 268888887653
No 80
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.55 E-value=2.6e-14 Score=160.47 Aligned_cols=111 Identities=23% Similarity=0.299 Sum_probs=95.3
Q ss_pred cceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECCeEeeeccccCCCCCccccEEEEEecc-CCCCeEEEEEEeCCCC-C
Q 003975 37 ELMHYLCVNVVKARNLPVMDVSGSLDPYVEVKLGNYKGITKHLEKNQNPVWNQIFAFSKER-LQSSLLEVTVKDKDIG-K 114 (782)
Q Consensus 37 ~~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~~~kT~~i~~t~nP~Wne~f~f~~~~-~~~~~L~i~V~d~d~~-~ 114 (782)
..++.|.|+|++|++|+. |..|.+||||+|++++++.+|+++++|+||+|||+|.|.+.. .....|+|+|||+|.. +
T Consensus 391 ~~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~ 469 (540)
T 3nsj_A 391 RGLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWD 469 (540)
T ss_dssp TTEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSC
T ss_pred CcccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCC
Confidence 348899999999999998 999999999999999999999999999999999999998643 3578899999999998 8
Q ss_pred CceeEEEEEEccccCCCCCCCCCCCCEEEEeccCCCCcccceEEEEEEEec
Q 003975 115 DDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKKGDQTTKGEIMLAVWMG 165 (782)
Q Consensus 115 d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~g~~~~~G~l~l~~~~~ 165 (782)
||+||++.++|.. + ....|++|. .|+|.+++...
T Consensus 470 dD~LG~~~~~L~~---g------~~~~~~~l~--------~G~l~~~~~~~ 503 (540)
T 3nsj_A 470 DDLLGSCDRSPHS---G------FHEVTCELN--------HGRVKFSYHAK 503 (540)
T ss_dssp CEEEEEEEECCCS---E------EEEEEEECS--------SSEEEEEEEEE
T ss_pred CCEEEEEEEEeeC---C------cEEEEEEcC--------CeEEEEEEEEE
Confidence 9999999999872 2 145788764 37888876654
No 81
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.50 E-value=1.3e-13 Score=158.55 Aligned_cols=120 Identities=23% Similarity=0.383 Sum_probs=104.2
Q ss_pred ceeEEEEEEEEeeCCCCCCC--CCCCCcEEEEEECC-----eEeeeccccCC-CCCccccEEEEEeccCCCCeEEEEEEe
Q 003975 38 LMHYLCVNVVKARNLPVMDV--SGSLDPYVEVKLGN-----YKGITKHLEKN-QNPVWNQIFAFSKERLQSSLLEVTVKD 109 (782)
Q Consensus 38 ~~~~L~V~v~~a~~L~~~d~--~g~~dPyv~v~~~~-----~~~kT~~i~~t-~nP~Wne~f~f~~~~~~~~~L~i~V~d 109 (782)
..+.|.|+|++|++|+..+. .|.+||||+|.+.+ .++||++++++ .||+|||+|.|.+.......|+|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 56799999999999998874 68999999999954 57899999998 999999999999976555789999999
Q ss_pred CCCC-CCceeEEEEEEccccCCCCCCCCCCCCEEEEeccCCCCcccceEEEEEEEec
Q 003975 110 KDIG-KDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKKGDQTTKGEIMLAVWMG 165 (782)
Q Consensus 110 ~d~~-~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~g~~~~~G~l~l~~~~~ 165 (782)
+|.. +|++||++.++|..|..+ -+|++|.+..|.....|.|.+.+.+.
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G--------~r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQG--------YRHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCE--------EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred cCCCCCCceeEEEEEEHHHcCCC--------cEEEeCCCCCcCCCCceEEEEEEEEE
Confidence 9988 999999999999999753 26999999888764568888888663
No 82
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.46 E-value=3.9e-15 Score=166.93 Aligned_cols=122 Identities=20% Similarity=0.340 Sum_probs=22.2
Q ss_pred ceeEEEEEEEEeecCCCCccCCCCCCCcEEEEEECCE-EEeecccCCC---CCCeeccEEEEEeeCCCceEEEEEEeC-C
Q 003975 365 SIGTLELGILSAKNLMQMKSKDGKLTDAYCVAKYGNK-WIRTRTILDT---LAPRWNEQYTWDVYDPCTVITIGVFDN-C 439 (782)
Q Consensus 365 ~~g~l~v~v~~a~~L~~~~~~~~~~~dpyv~v~~~~~-~~rT~~~~~t---~~P~wne~~~f~v~~~~~~l~i~v~d~-~ 439 (782)
..|.|+|+|++|+||+++| ||||++.++++ +.||+++++| +||+|||.|.|.+......|.|+|||+ +
T Consensus 9 ~~~~L~V~VieAk~L~~~d-------dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d 81 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPKK-------RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSD 81 (483)
T ss_dssp EEECC----------------------------------------------------CCEECC-----------------
T ss_pred eccEEEEEEEEcCCcCCCC-------CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCC
Confidence 4579999999999998653 89999999875 6899999999 999999999999765568999999995 4
Q ss_pred c---CCCCCCCCCCCccEEEEEEcccccCCceEEEEEeeeecCC---------------------CCCCcCcEEEEEEEE
Q 003975 440 Y---VNGSKDDAKDQRIGKVRIRLSTLETDRIYTHYYPLLLLTP---------------------SGLKNNGELHLALRF 495 (782)
Q Consensus 440 ~---~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~---------------------~g~~~~G~i~l~~~~ 495 (782)
. .+ +|++||++.|+++++..+....+||+|..... ++.+..|.|+|+++|
T Consensus 82 ~~~~~~------~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~ 155 (483)
T 3bxj_A 82 KKRKKD------KAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARY 155 (483)
T ss_dssp -------------------------------CCEECC--------------------------------------CEEEE
T ss_pred ccccCC------CCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEe
Confidence 2 33 89999999999999998888899999975432 122346999999999
Q ss_pred EEcc
Q 003975 496 TCTA 499 (782)
Q Consensus 496 ~~~~ 499 (782)
+...
T Consensus 156 ~~~~ 159 (483)
T 3bxj_A 156 QTMS 159 (483)
T ss_dssp EECC
T ss_pred eeee
Confidence 7654
No 83
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.45 E-value=4.5e-13 Score=153.92 Aligned_cols=119 Identities=19% Similarity=0.296 Sum_probs=98.6
Q ss_pred ceeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEECC-----EEEeecccCCC-CCCeeccEEEEEeeCCC-ceEEEEEE
Q 003975 365 SIGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYGN-----KWIRTRTILDT-LAPRWNEQYTWDVYDPC-TVITIGVF 436 (782)
Q Consensus 365 ~~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~-----~~~rT~~~~~t-~~P~wne~~~f~v~~~~-~~l~i~v~ 436 (782)
..+.|+|+|++|++|+.++.. ..+. ||||+|.+.+ .+.||++++++ +||+|||.|.|.+..+. ..|.|+||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~-~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~ 573 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKN-KNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVE 573 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSC-SSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEE
T ss_pred cceEEEEEEEEcCCCCccccc-ccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEE
Confidence 458999999999999987631 1356 9999999944 68999999997 99999999999998763 68999999
Q ss_pred eCCcCCCCCCCCCCCccEEEEEEcccccCCceEEEEEeeeecCCCCCC-cCcEEEEEEEE
Q 003975 437 DNCYVNGSKDDAKDQRIGKVRIRLSTLETDRIYTHYYPLLLLTPSGLK-NNGELHLALRF 495 (782)
Q Consensus 437 d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~g~~-~~G~i~l~~~~ 495 (782)
|+|.++ +|++||++.|+|+.|..|. +|++|.+.. |.. ..|.|.+.+.|
T Consensus 574 D~D~~~------~dd~iG~~~ipl~~L~~G~---r~v~L~d~~--g~~~~~~~L~v~i~~ 622 (624)
T 1djx_A 574 DYDSSS------KNDFIGQSTIPWNSLKQGY---RHVHLLSKN--GDQHPSATLFVKISI 622 (624)
T ss_dssp ECCSSS------CCEEEEEEEEEGGGBCCEE---EEEEEECTT--SCEEEEEEEEEEEEE
T ss_pred EcCCCC------CCceeEEEEEEHHHcCCCc---EEEeCCCCC--cCCCCceEEEEEEEE
Confidence 999876 8999999999999998763 599998633 222 24788888776
No 84
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.44 E-value=1.4e-13 Score=159.17 Aligned_cols=107 Identities=25% Similarity=0.435 Sum_probs=95.4
Q ss_pred cceeEEEEEEEEeeCCCC---CCCCCCCCcEEEEEECC---eEeeeccccCCCCCccccEEEEEeccCCCCeEEEEEEeC
Q 003975 37 ELMHYLCVNVVKARNLPV---MDVSGSLDPYVEVKLGN---YKGITKHLEKNQNPVWNQIFAFSKERLQSSLLEVTVKDK 110 (782)
Q Consensus 37 ~~~~~L~V~v~~a~~L~~---~d~~g~~dPyv~v~~~~---~~~kT~~i~~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~ 110 (782)
.+.+.|.|+|++|++|+. +|..|.+||||+|++++ .++||+++++|+||+|||+|.|.+.......|.|+|||+
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 357899999999999998 78889999999999984 678999999999999999999999876678999999999
Q ss_pred CCCCCceeEEEEEEccccCCCCCCCCCCCCEEEEeccC
Q 003975 111 DIGKDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDK 148 (782)
Q Consensus 111 d~~~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~ 148 (782)
|...|++||++.++|.++..+. ...+|++|...
T Consensus 95 D~~~ddfIG~v~I~L~~L~~g~-----~~~~w~~L~~~ 127 (749)
T 1cjy_A 95 NYVMDETLGTATFTVSSMKVGE-----KKEVPFIFNQV 127 (749)
T ss_dssp CSSSCEEEEEECCBSTTSCTTC-----CCCEEEEETTT
T ss_pred CCCCCceeEEEEEEHHHcCCCC-----ceEEEEecCCC
Confidence 9877999999999999997653 25799999764
No 85
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.39 E-value=4.1e-13 Score=155.17 Aligned_cols=104 Identities=19% Similarity=0.275 Sum_probs=92.4
Q ss_pred CceeEEEEEEEEeecCCC---CccCCCCCC-CcEEEEEECC---EEEeecccCCCCCCeeccEEEEEeeCC-CceEEEEE
Q 003975 364 GSIGTLELGILSAKNLMQ---MKSKDGKLT-DAYCVAKYGN---KWIRTRTILDTLAPRWNEQYTWDVYDP-CTVITIGV 435 (782)
Q Consensus 364 ~~~g~l~v~v~~a~~L~~---~~~~~~~~~-dpyv~v~~~~---~~~rT~~~~~t~~P~wne~~~f~v~~~-~~~l~i~v 435 (782)
++.|.|+|+|++|+||+. +|.. |+ ||||+|++++ +++||+++++++||+|||.|.|.+..+ ...|.|+|
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~---g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V 91 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDML---DTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITL 91 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHH---CCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEE
T ss_pred CCccEEEEEEEEEECCCCccccCCC---CCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEE
Confidence 457899999999999998 6543 66 9999999984 689999999999999999999999874 67999999
Q ss_pred EeCCcCCCCCCCCCCCccEEEEEEcccccCCceEEEEEeeee
Q 003975 436 FDNCYVNGSKDDAKDQRIGKVRIRLSTLETDRIYTHYYPLLL 477 (782)
Q Consensus 436 ~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~ 477 (782)
||+|.+ .|++||++.|+|.++..+....+|++|..
T Consensus 92 ~D~D~~-------~ddfIG~v~I~L~~L~~g~~~~~w~~L~~ 126 (749)
T 1cjy_A 92 MDANYV-------MDETLGTATFTVSSMKVGEKKEVPFIFNQ 126 (749)
T ss_dssp EECCSS-------SCEEEEEECCBSTTSCTTCCCCEEEEETT
T ss_pred EECCCC-------CCceeEEEEEEHHHcCCCCceEEEEecCC
Confidence 999975 38999999999999998888899999963
No 86
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.27 E-value=3.2e-13 Score=151.38 Aligned_cols=117 Identities=21% Similarity=0.337 Sum_probs=18.1
Q ss_pred eeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECCe-EeeeccccCC---CCCccccEEEEEeccCCCCeEEEEEEeC-C--
Q 003975 39 MHYLCVNVVKARNLPVMDVSGSLDPYVEVKLGNY-KGITKHLEKN---QNPVWNQIFAFSKERLQSSLLEVTVKDK-D-- 111 (782)
Q Consensus 39 ~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~-~~kT~~i~~t---~nP~Wne~f~f~~~~~~~~~L~i~V~d~-d-- 111 (782)
.+.|.|+|++|++|+++| ||||+++++++ ..||+++++| .||+|||+|.|.+... ...|.|+|||. |
T Consensus 10 ~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d~~d~~ 83 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYRDSDKK 83 (483)
T ss_dssp EECC--------------------------------------------------CCEECC--------------------
T ss_pred ccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEecCCcc
Confidence 467999999999999887 99999999886 6799999999 9999999999986543 57899999994 4
Q ss_pred -CC-CCceeEEEEEEccccCCCCCCCCCCCCEEEEeccCCCC----------------------cccceEEEEEEEecc
Q 003975 112 -IG-KDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKKGD----------------------QTTKGEIMLAVWMGT 166 (782)
Q Consensus 112 -~~-~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~g~----------------------~~~~G~l~l~~~~~~ 166 (782)
.. +|++||++.|++.++..+. ..++||+|.+..+. ....|.|.+++.|..
T Consensus 84 ~~~~~d~~lG~v~i~l~~l~~~~-----~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~ 157 (483)
T 3bxj_A 84 RKKDKAGYVGLVTVPVATLAGRH-----FTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQT 157 (483)
T ss_dssp ----------------------------CCEECC--------------------------------------CEEEEEE
T ss_pred ccCCCCceEEEEEEEHHHhcCCC-----CCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeee
Confidence 24 8999999999999998653 36789999654320 124588888887753
No 87
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.16 E-value=9.9e-11 Score=137.46 Aligned_cols=112 Identities=21% Similarity=0.278 Sum_probs=94.1
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC------eEeeeccccCC-CCCcccc-EEEEE-eccCCCCeEEEEEEeC
Q 003975 40 HYLCVNVVKARNLPVMDVSGSLDPYVEVKLGN------YKGITKHLEKN-QNPVWNQ-IFAFS-KERLQSSLLEVTVKDK 110 (782)
Q Consensus 40 ~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~------~~~kT~~i~~t-~nP~Wne-~f~f~-~~~~~~~~L~i~V~d~ 110 (782)
..|.|+|++|++|+. ..+||||+|.+.+ .+++|+++.++ .||+||| +|.|. +.......|+|+|||+
T Consensus 725 ~~L~V~Visaq~L~~----~~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~ 800 (885)
T 3ohm_B 725 NALRVKVISGQFLSD----RKVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEE 800 (885)
T ss_dssp EEEEEEEEEEESCCS----SCCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEET
T ss_pred eEEEEEEEEeccCcc----cCCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcC
Confidence 479999999999985 3689999999965 35799999865 9999999 69998 6544456899999999
Q ss_pred CCCCCceeEEEEEEccccCCCCCCCCCCCCEEEEeccCCCCcccceEEEEEEEecc
Q 003975 111 DIGKDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKKGDQTTKGEIMLAVWMGT 166 (782)
Q Consensus 111 d~~~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~g~~~~~G~l~l~~~~~~ 166 (782)
| +++||++.++|..|..+ -++++|.+..|.....|.|.+.+.+..
T Consensus 801 d---ddfiG~~~lpL~~L~~G--------yR~vpL~~~~g~~l~~atLfv~i~~~~ 845 (885)
T 3ohm_B 801 G---GKFVGHRILPVSAIRSG--------YHYVCLRNEANQPLCLPALLIYTEASD 845 (885)
T ss_dssp T---TEEEEEEEEETTTCCCE--------EEEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred C---ccEEeeEEEEHHHcCCC--------ceEEEecCCCCCccCceEEEEEEEEEe
Confidence 7 89999999999999754 257899998888656799999998874
No 88
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.16 E-value=1.6e-10 Score=135.03 Aligned_cols=113 Identities=16% Similarity=0.269 Sum_probs=94.9
Q ss_pred eeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC-------eEeeeccccC-CCCCccccE-EEEE-eccCCCCeEEEEEE
Q 003975 39 MHYLCVNVVKARNLPVMDVSGSLDPYVEVKLGN-------YKGITKHLEK-NQNPVWNQI-FAFS-KERLQSSLLEVTVK 108 (782)
Q Consensus 39 ~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~-------~~~kT~~i~~-t~nP~Wne~-f~f~-~~~~~~~~L~i~V~ 108 (782)
.+.|.|+|++|++|+.. .+||||+|.+.+ .+++|+++++ +.||+|||+ |.|. +....-..|+|+||
T Consensus 649 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~ 724 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVS 724 (816)
T ss_dssp CEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEE
Confidence 36899999999999853 689999999965 5679999986 599999998 9998 75544578999999
Q ss_pred eCCCCCCceeEEEEEEccccCCCCCCCCCCCCEEEEeccCCCCcccceEEEEEEEecc
Q 003975 109 DKDIGKDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKKGDQTTKGEIMLAVWMGT 166 (782)
Q Consensus 109 d~d~~~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~g~~~~~G~l~l~~~~~~ 166 (782)
|++ +++||++.++|..|..+ -++++|.+..|.....+.|.+.+.+..
T Consensus 725 D~d---ddfiG~~~ipL~~L~~G--------yR~vpL~~~~g~~~~~atLfv~i~~~~ 771 (816)
T 3qr0_A 725 EEN---GKFIGHRVMPLDGIKPG--------YRHVPLRNESNRPLGLASVFAHIVAKD 771 (816)
T ss_dssp ETT---SCEEEEEEEESTTCCCE--------EEEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred ecC---CCeeeEEEEEHHHcCCc--------ceEEEEeCCCCCCCCceEEEEEEEEEe
Confidence 985 79999999999999764 257899999888645689999888764
No 89
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.14 E-value=6e-11 Score=139.21 Aligned_cols=105 Identities=33% Similarity=0.563 Sum_probs=92.4
Q ss_pred eeEEEEEEEEeeCCCCCCCCCCCCcEEEEEE-----CCeEeeeccccCCCCCccccEEEEEeccC-CCCeEEEEEEeCCC
Q 003975 39 MHYLCVNVVKARNLPVMDVSGSLDPYVEVKL-----GNYKGITKHLEKNQNPVWNQIFAFSKERL-QSSLLEVTVKDKDI 112 (782)
Q Consensus 39 ~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~-----~~~~~kT~~i~~t~nP~Wne~f~f~~~~~-~~~~L~i~V~d~d~ 112 (782)
.+.|.|+|.+|++|+.+|..|.+||||++++ +..+.+|+++++|+||+|||+|.|.+... ....|.|+|||+|.
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~ 250 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 250 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc
Confidence 4789999999999999999999999999999 33578999999999999999999998642 34569999999999
Q ss_pred C-CCceeEEEEEEccccCCCCCCCCCCCCEEEEeccCC
Q 003975 113 G-KDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKK 149 (782)
Q Consensus 113 ~-~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~ 149 (782)
. +|++||++.+++.++.... ...|+.|....
T Consensus 251 ~~~dd~iG~~~i~l~~l~~~~------~~~w~~Lls~~ 282 (674)
T 3pfq_A 251 TSRNDFMGSLSFGISELQKAG------VDGWFKLLSQE 282 (674)
T ss_dssp SSCCEECCBCCCBTTHHHHCC------EEEEEECBCTT
T ss_pred ccccccccccccchhhhccCC------cccceeecccc
Confidence 8 9999999999999997642 46899998754
No 90
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.13 E-value=1.3e-10 Score=136.37 Aligned_cols=101 Identities=23% Similarity=0.413 Sum_probs=89.3
Q ss_pred eEEEEEEEEeecCCCCccCCCCCC-CcEEEEEE-----CCEEEeecccCCCCCCeeccEEEEEeeC--CCceEEEEEEeC
Q 003975 367 GTLELGILSAKNLMQMKSKDGKLT-DAYCVAKY-----GNKWIRTRTILDTLAPRWNEQYTWDVYD--PCTVITIGVFDN 438 (782)
Q Consensus 367 g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~-----~~~~~rT~~~~~t~~P~wne~~~f~v~~--~~~~l~i~v~d~ 438 (782)
+.|.|.|++|+||.++|.. |. ||||++.+ +..+.+|+++++++||+|||.|.|.+.. ....|.|+|||+
T Consensus 172 ~~L~V~v~~a~~L~~~d~~---g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~ 248 (674)
T 3pfq_A 172 EVLIVVVRDAKNLVPMDPN---GLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDW 248 (674)
T ss_dssp SEEEEEEEEEESCCCCSTT---SSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEEC
T ss_pred ceeeeeeecccccCCCCcc---cccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeec
Confidence 6899999999999998754 66 99999999 4467999999999999999999999874 345799999999
Q ss_pred CcCCCCCCCCCCCccEEEEEEcccccCCceEEEEEeeee
Q 003975 439 CYVNGSKDDAKDQRIGKVRIRLSTLETDRIYTHYYPLLL 477 (782)
Q Consensus 439 ~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~ 477 (782)
|.++ +|++||.+.++++++.... ..+|++|..
T Consensus 249 d~~~------~dd~iG~~~i~l~~l~~~~-~~~w~~Lls 280 (674)
T 3pfq_A 249 DLTS------RNDFMGSLSFGISELQKAG-VDGWFKLLS 280 (674)
T ss_dssp CSSS------CCEECCBCCCBTTHHHHCC-EEEEEECBC
T ss_pred cccc------ccccccccccchhhhccCC-cccceeecc
Confidence 9876 8999999999999998765 489999975
No 91
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.11 E-value=2.9e-10 Score=133.70 Aligned_cols=112 Identities=22% Similarity=0.305 Sum_probs=91.7
Q ss_pred ceeEEEEEEEEeeCCCCCCCCCCCCcEEEEEECC------eEeeec-cccC-CCCCcccc-EEEE-EeccCCCCeEEEEE
Q 003975 38 LMHYLCVNVVKARNLPVMDVSGSLDPYVEVKLGN------YKGITK-HLEK-NQNPVWNQ-IFAF-SKERLQSSLLEVTV 107 (782)
Q Consensus 38 ~~~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~------~~~kT~-~i~~-t~nP~Wne-~f~f-~~~~~~~~~L~i~V 107 (782)
..+.|.|+|++|++|+. +.+||||+|.+.+ +++||+ ++++ +.||+||| +|.| .+.......|+|+|
T Consensus 676 ~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V 751 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAV 751 (799)
T ss_dssp TCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEE
T ss_pred eeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEE
Confidence 35789999999999984 4689999999943 357999 8875 58999999 6999 77654456899999
Q ss_pred EeCCCCCCceeEEEEEEccccCCCCCCCCCCCCEEEEeccCCCCcccceEEEEEEEe
Q 003975 108 KDKDIGKDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKKGDQTTKGEIMLAVWM 164 (782)
Q Consensus 108 ~d~d~~~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~g~~~~~G~l~l~~~~ 164 (782)
||++ +++||++.++|..|..+ -+|++|.+..|.....+.|.+.+.+
T Consensus 752 ~D~d---~d~iG~~~ipl~~L~~G--------~r~v~L~~~~g~~~~~~~Lfv~i~~ 797 (799)
T 2zkm_X 752 MEEG---NKFLGHRIIPINALNSG--------YHHLCLHSESNMPLTMPALFIFLEM 797 (799)
T ss_dssp EETT---TEEEEEEEEEGGGBCCE--------EEEEEEECTTCCEEEEEEEEEEEEE
T ss_pred EEeC---CCccceEeeehhhcCCC--------cEEEeccCCCCCCCCceEEEEEEEE
Confidence 9996 89999999999999753 3689999988775446788887765
No 92
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.05 E-value=8.6e-10 Score=128.91 Aligned_cols=110 Identities=21% Similarity=0.283 Sum_probs=88.3
Q ss_pred eeEEEEEEEEeecCCCCccCCCCCCCcEEEEEECC-------EEEeecccCC-CCCCeeccE-EEEE-eeCC-CceEEEE
Q 003975 366 IGTLELGILSAKNLMQMKSKDGKLTDAYCVAKYGN-------KWIRTRTILD-TLAPRWNEQ-YTWD-VYDP-CTVITIG 434 (782)
Q Consensus 366 ~g~l~v~v~~a~~L~~~~~~~~~~~dpyv~v~~~~-------~~~rT~~~~~-t~~P~wne~-~~f~-v~~~-~~~l~i~ 434 (782)
.+.|+|+|++|++|+.. ..||||+|.+.+ +++||+++++ ++||+|||+ |.|. |..| -..|+|.
T Consensus 649 ~~~L~V~Visaq~L~~~------~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~ 722 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK------QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRII 722 (816)
T ss_dssp CEEEEEEEEEEECCCSS------CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEE
T ss_pred ceEEEEEEEEcccCCCC------CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEE
Confidence 47899999999999742 249999999954 6789999986 699999998 9998 7665 3589999
Q ss_pred EEeCCcCCCCCCCCCCCccEEEEEEcccccCCceEEEEEeeeecCCCCCC-cCcEEEEEEEEE
Q 003975 435 VFDNCYVNGSKDDAKDQRIGKVRIRLSTLETDRIYTHYYPLLLLTPSGLK-NNGELHLALRFT 496 (782)
Q Consensus 435 v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~g~~-~~G~i~l~~~~~ 496 (782)
|||++ |++||++.|+|+.|..|. ++++|.+.. |.. ..+.|.+.+.+.
T Consensus 723 V~D~d----------ddfiG~~~ipL~~L~~Gy---R~vpL~~~~--g~~~~~atLfv~i~~~ 770 (816)
T 3qr0_A 723 VSEEN----------GKFIGHRVMPLDGIKPGY---RHVPLRNES--NRPLGLASVFAHIVAK 770 (816)
T ss_dssp EEETT----------SCEEEEEEEESTTCCCEE---EEEEEECTT--SCEEEEEEEEEEEEEE
T ss_pred EEecC----------CCeeeEEEEEHHHcCCcc---eEEEEeCCC--CCCCCceEEEEEEEEE
Confidence 99973 789999999999998873 579998643 222 237788887764
No 93
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.02 E-value=7.2e-10 Score=130.24 Aligned_cols=109 Identities=19% Similarity=0.284 Sum_probs=87.3
Q ss_pred eEEEEEEEEeecCCCCccCCCCCCCcEEEEEECC------EEEeecccCC-CCCCeecc-EEEEE-eeCC-CceEEEEEE
Q 003975 367 GTLELGILSAKNLMQMKSKDGKLTDAYCVAKYGN------KWIRTRTILD-TLAPRWNE-QYTWD-VYDP-CTVITIGVF 436 (782)
Q Consensus 367 g~l~v~v~~a~~L~~~~~~~~~~~dpyv~v~~~~------~~~rT~~~~~-t~~P~wne-~~~f~-v~~~-~~~l~i~v~ 436 (782)
..|.|+|++|++|+.. ..||||+|.+.+ .++||+++++ ++||+||| .|.|. |..| ...|+|+||
T Consensus 725 ~~L~V~Visaq~L~~~------~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~ 798 (885)
T 3ohm_B 725 NALRVKVISGQFLSDR------KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAF 798 (885)
T ss_dssp EEEEEEEEEEESCCSS------CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred eEEEEEEEEeccCccc------CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEE
Confidence 4899999999999841 249999999954 3589999976 59999999 69998 7655 458999999
Q ss_pred eCCcCCCCCCCCCCCccEEEEEEcccccCCceEEEEEeeeecCCCCCC-cCcEEEEEEEEE
Q 003975 437 DNCYVNGSKDDAKDQRIGKVRIRLSTLETDRIYTHYYPLLLLTPSGLK-NNGELHLALRFT 496 (782)
Q Consensus 437 d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~g~~-~~G~i~l~~~~~ 496 (782)
|++ |++||++.|+|+.|..|. ++++|.+.. |.. ..|.|.+.+.+.
T Consensus 799 D~d----------ddfiG~~~lpL~~L~~Gy---R~vpL~~~~--g~~l~~atLfv~i~~~ 844 (885)
T 3ohm_B 799 EEG----------GKFVGHRILPVSAIRSGY---HYVCLRNEA--NQPLCLPALLIYTEAS 844 (885)
T ss_dssp ETT----------TEEEEEEEEETTTCCCEE---EEEEEECTT--SCEEEEEEEEEEEEEE
T ss_pred cCC----------ccEEeeEEEEHHHcCCCc---eEEEecCCC--CCccCceEEEEEEEEE
Confidence 974 689999999999998763 468887643 222 358899988875
No 94
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.00 E-value=1.4e-09 Score=127.99 Aligned_cols=111 Identities=17% Similarity=0.294 Sum_probs=86.2
Q ss_pred ceeEEEEEEEEeecCCCCccCCCCCCCcEEEEEECC------EEEeec-ccCC-CCCCeecc-EEEE-EeeCC-CceEEE
Q 003975 365 SIGTLELGILSAKNLMQMKSKDGKLTDAYCVAKYGN------KWIRTR-TILD-TLAPRWNE-QYTW-DVYDP-CTVITI 433 (782)
Q Consensus 365 ~~g~l~v~v~~a~~L~~~~~~~~~~~dpyv~v~~~~------~~~rT~-~~~~-t~~P~wne-~~~f-~v~~~-~~~l~i 433 (782)
..|.|.|+|++|++|+.. ..||||+|.+.+ +++||+ ++++ ++||+||| .|.| .|..+ -..|+|
T Consensus 676 ~~~~L~V~Visa~~L~~~------~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~ 749 (799)
T 2zkm_X 676 VATTLSITVISGQFLSER------SVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRV 749 (799)
T ss_dssp TCEEEEEEEEEEESCCSS------CCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEE
T ss_pred eeeeEEEEEEeccccCcc------CCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEE
Confidence 467999999999999841 239999999932 358999 8865 69999999 6999 88765 348999
Q ss_pred EEEeCCcCCCCCCCCCCCccEEEEEEcccccCCceEEEEEeeeecCCCCCCcCcEEEEEEEE
Q 003975 434 GVFDNCYVNGSKDDAKDQRIGKVRIRLSTLETDRIYTHYYPLLLLTPSGLKNNGELHLALRF 495 (782)
Q Consensus 434 ~v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~g~~~~G~i~l~~~~ 495 (782)
.|||++ |++||++.|+|+.|..|. +|++|.+..... -..+.|.+.+.+
T Consensus 750 ~V~D~d----------~d~iG~~~ipl~~L~~G~---r~v~L~~~~g~~-~~~~~Lfv~i~~ 797 (799)
T 2zkm_X 750 AVMEEG----------NKFLGHRIIPINALNSGY---HHLCLHSESNMP-LTMPALFIFLEM 797 (799)
T ss_dssp EEEETT----------TEEEEEEEEEGGGBCCEE---EEEEEECTTCCE-EEEEEEEEEEEE
T ss_pred EEEEeC----------CCccceEeeehhhcCCCc---EEEeccCCCCCC-CCceEEEEEEEE
Confidence 999974 689999999999998763 589997533211 124777777765
No 95
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.94 E-value=5e-09 Score=91.13 Aligned_cols=114 Identities=15% Similarity=0.259 Sum_probs=87.4
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCcEEEEEECCe----Eeee-ccccCCCCCccccEEEEEeccCCCCeEEEEEEeCCCCC
Q 003975 40 HYLCVNVVKARNLPVMDVSGSLDPYVEVKLGNY----KGIT-KHLEKNQNPVWNQIFAFSKERLQSSLLEVTVKDKDIGK 114 (782)
Q Consensus 40 ~~L~V~v~~a~~L~~~d~~g~~dPyv~v~~~~~----~~kT-~~i~~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~d~~~ 114 (782)
..|+|.+.++.--+-+......||||.|.+... ..+| .++++|..|+|||.|.-.+++ ...|.|.|++...
T Consensus 6 ~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~-- 81 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAAE-- 81 (126)
T ss_dssp CEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEETT--
T ss_pred ccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCCC--
Confidence 478899877764332223356899999999763 2365 888899999999999999987 6889999997754
Q ss_pred CceeEEEEEEccccCCCCCCCCCCCCEEEEeccCCCCcccceEEEEEEEec
Q 003975 115 DDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKKGDQTTKGEIMLAVWMG 165 (782)
Q Consensus 115 d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~g~~~~~G~l~l~~~~~ 165 (782)
++++.|+|.+.+|..+....+...+.|++|+. .|+|++.+.+.
T Consensus 82 -~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP-------~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 -EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQP-------QAKVLMSVQYF 124 (126)
T ss_dssp -EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBS-------SCEEEEEEEEE
T ss_pred -CeeeEEEEEHHHHHhhhccCCCceEEEEeccc-------CcEEEEEEEEe
Confidence 99999999999998541111224678999986 68899888664
No 96
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.91 E-value=2.1e-08 Score=87.20 Aligned_cols=107 Identities=15% Similarity=0.282 Sum_probs=84.2
Q ss_pred eEEEEEEEEeecCCCCccCCCCCC-CcEEEEEECCEE----Eee-cccCCCCCCeeccEEEEEeeCCCceEEEEEEeCCc
Q 003975 367 GTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYGNKW----IRT-RTILDTLAPRWNEQYTWDVYDPCTVITIGVFDNCY 440 (782)
Q Consensus 367 g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~~~----~rT-~~~~~t~~P~wne~~~f~v~~~~~~l~i~v~d~~~ 440 (782)
+.|+|...++.--+-+. .... ||||.|.+.... .+| .+.++|..|.|||.|.-.|.+ +..|.|.||+..
T Consensus 6 ~flRi~~~~~~~~~~~~---~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~a- 80 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQA---EDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE-GRVIQIVLMRAA- 80 (126)
T ss_dssp CEEEEEEEEEECSSCCC---SSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT-TCEEEEEEEEET-
T ss_pred ccEEeeeccccccccCC---ccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC-CEEEEEEEEcCC-
Confidence 47888887666322111 0123 999999986543 366 778889999999999999886 489999999753
Q ss_pred CCCCCCCCCCCccEEEEEEccccc-----CCceEEEEEeeeecCCCCCCcCcEEEEEEEE
Q 003975 441 VNGSKDDAKDQRIGKVRIRLSTLE-----TDRIYTHYYPLLLLTPSGLKNNGELHLALRF 495 (782)
Q Consensus 441 ~~~~~~~~~d~~lG~~~i~l~~l~-----~~~~~~~w~~L~~~~~~g~~~~G~i~l~~~~ 495 (782)
-++|+.|+|++.+|. .+...+-|++|++ +|+|++.+++
T Consensus 81 ---------~~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP--------~Gkl~~~i~~ 123 (126)
T 1yrk_A 81 ---------EEPVSEVTVGVSVLAERCKKNNGKAEFWLDLQP--------QAKVLMSVQY 123 (126)
T ss_dssp ---------TEEEEEEEEEHHHHHHHHHTTTTEEEEEEECBS--------SCEEEEEEEE
T ss_pred ---------CCeeeEEEEEHHHHHhhhccCCCceEEEEeccc--------CcEEEEEEEE
Confidence 389999999999997 4678899999975 7999999986
No 97
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.88 E-value=1.5e-08 Score=89.30 Aligned_cols=109 Identities=15% Similarity=0.178 Sum_probs=86.0
Q ss_pred eeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEECCE-E---Eee-cccCCCCCCeeccEEEEEeeCCCceEEEEEEeCC
Q 003975 366 IGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKYGNK-W---IRT-RTILDTLAPRWNEQYTWDVYDPCTVITIGVFDNC 439 (782)
Q Consensus 366 ~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~~~~-~---~rT-~~~~~t~~P~wne~~~f~v~~~~~~l~i~v~d~~ 439 (782)
.+.|+|...++.-.+-+.. .... ||||.|.+... . .+| .+.++|..|+|||.|.-.|.+ ...|.|.||+..
T Consensus 9 ~~flRi~l~~~~~~~~~~~--~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~a 85 (138)
T 2enj_A 9 SPFLRIGLSNFDCGSCQSC--QGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK-GRVMQIIVKGKN 85 (138)
T ss_dssp CCCEEEEEEEEECCCCCCS--CCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS-SCEEEEEEECSS
T ss_pred CcceEEEeeccccCCCCCc--ccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC-CeEEEEEEEcCC
Confidence 4578888877764332210 1124 99999998653 3 677 777889999999999999886 489999999753
Q ss_pred cCCCCCCCCCCCccEEEEEEccccc-----CCceEEEEEeeeecCCCCCCcCcEEEEEEEE
Q 003975 440 YVNGSKDDAKDQRIGKVRIRLSTLE-----TDRIYTHYYPLLLLTPSGLKNNGELHLALRF 495 (782)
Q Consensus 440 ~~~~~~~~~~d~~lG~~~i~l~~l~-----~~~~~~~w~~L~~~~~~g~~~~G~i~l~~~~ 495 (782)
-++|+.|+|++.+|. .+...+-|++|+. .|+|++.+++
T Consensus 86 ----------~~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP--------~Gkl~v~i~~ 128 (138)
T 2enj_A 86 ----------VDLISETTVELYSLAERCRKNNGKTEIWLELKP--------QGRMLMNARY 128 (138)
T ss_dssp ----------CSCCEEEEEESHHHHHHHHHTTTCEEEEEECBS--------SCEEEEEEEE
T ss_pred ----------CCeeeEEEEEHHHHHhhhccCCCceEEEEeccc--------CcEEEEEEEE
Confidence 389999999999997 4567899999975 7999999987
No 98
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.87 E-value=5.1e-09 Score=92.25 Aligned_cols=115 Identities=16% Similarity=0.377 Sum_probs=89.4
Q ss_pred eeEEEEEEEEeeCCCCCC-CCCCCCcEEEEEECCe----Eeee-ccccCCCCCccccEEEEEeccCCCCeEEEEEEeCCC
Q 003975 39 MHYLCVNVVKARNLPVMD-VSGSLDPYVEVKLGNY----KGIT-KHLEKNQNPVWNQIFAFSKERLQSSLLEVTVKDKDI 112 (782)
Q Consensus 39 ~~~L~V~v~~a~~L~~~d-~~g~~dPyv~v~~~~~----~~kT-~~i~~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~d~ 112 (782)
.+.|+|.+.++.-.+.+. .....||||.|.+... ..+| .++++|..|+|||.|.-.+.+ ...|.|.|++...
T Consensus 9 ~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~ 86 (138)
T 2enj_A 9 SPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK--GRVMQIIVKGKNV 86 (138)
T ss_dssp CCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS--SCEEEEEEECSSC
T ss_pred CcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC--CeEEEEEEEcCCC
Confidence 357899998887554332 2346899999999763 2677 788889999999999999987 6889999997654
Q ss_pred CCCceeEEEEEEccccCCCCCCCCCCCCEEEEeccCCCCcccceEEEEEEEec
Q 003975 113 GKDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKKGDQTTKGEIMLAVWMG 165 (782)
Q Consensus 113 ~~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~g~~~~~G~l~l~~~~~ 165 (782)
+|++.|+|.+.+|..+........+.|++|+. .|+|++.+.+.
T Consensus 87 ---~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP-------~Gkl~v~i~~~ 129 (138)
T 2enj_A 87 ---DLISETTVELYSLAERCRKNNGKTEIWLELKP-------QGRMLMNARYF 129 (138)
T ss_dssp ---SCCEEEEEESHHHHHHHHHTTTCEEEEEECBS-------SCEEEEEEEEC
T ss_pred ---CeeeEEEEEHHHHHhhhccCCCceEEEEeccc-------CcEEEEEEEEE
Confidence 89999999999998541101124678999986 68999998875
No 99
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=88.10 E-value=1.6 Score=39.63 Aligned_cols=129 Identities=12% Similarity=0.070 Sum_probs=87.1
Q ss_pred eccccceeEEEEEEEEeeCCCCCC-CCCCCCcEEEEEE--CC-eEeeeccccCCCCCccccEEEEEecc-------CCCC
Q 003975 33 YDLVELMHYLCVNVVKARNLPVMD-VSGSLDPYVEVKL--GN-YKGITKHLEKNQNPVWNQIFAFSKER-------LQSS 101 (782)
Q Consensus 33 ~~~~~~~~~L~V~v~~a~~L~~~d-~~g~~dPyv~v~~--~~-~~~kT~~i~~t~nP~Wne~f~f~~~~-------~~~~ 101 (782)
..+.+.-+.+.|+|.++.-=+..- ..+..+|..-+.+ -+ +.+.|.+.. ..+|.+|.+-.+.+.. +.+.
T Consensus 11 ~~l~~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~ 89 (156)
T 2yrb_A 11 IHLERGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKN 89 (156)
T ss_dssp SSCCSSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHC
T ss_pred hhccCCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcC
Confidence 345666678999999987321110 1234577655555 45 456666665 8899999998888742 2356
Q ss_pred eEEEEEEeCCCCCCceeEEEEEEccccCCCCCCCCCCCCEEEEeccCCCCcccceEEEEEEEecc
Q 003975 102 LLEVTVKDKDIGKDDFVGRVSLDLSQVPLRVPPDSPLAPQWYRLEDKKGDQTTKGEIMLAVWMGT 166 (782)
Q Consensus 102 ~L~i~V~d~d~~~d~~lG~~~v~l~~l~~~~~~~~~~~~~w~~L~~~~g~~~~~G~l~l~~~~~~ 166 (782)
.|.++++......-+.||.|.|++.++..+.. ....-.+|.+..|....-|.|.+.+.+..
T Consensus 90 ~l~lELhqa~g~~~~tla~~~I~l~~lLe~~~----~i~g~~~L~g~~g~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 90 TITLEVHQAYSTEYETIAACQLKFHEILEKSG----RIFCTASLIGTKGDIPNFGTVEYWFRLRV 150 (156)
T ss_dssp CEEEEEEEECSSCEEEEEEEEECCSHHHHCCS----CEEEEEEECBSSSCCTTSEEEEEEEEEEE
T ss_pred CEEEEEEEeeCCCceEEEEEEEEhHHhhCcCC----ceEEEEEEEcCCCCcceEEEEEEEEEEec
Confidence 78999988765477799999999999986532 12334578777663124899988887754
No 100
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=87.96 E-value=6.1 Score=38.07 Aligned_cols=40 Identities=13% Similarity=0.181 Sum_probs=33.5
Q ss_pred EeeeccccCCCCCccccEEEEEec--cCCCCeEEEEEEeCCC
Q 003975 73 KGITKHLEKNQNPVWNQIFAFSKE--RLQSSLLEVTVKDKDI 112 (782)
Q Consensus 73 ~~kT~~i~~t~nP~Wne~f~f~~~--~~~~~~L~i~V~d~d~ 112 (782)
.++|.+.+.+.+|.|+|++.+.+. ......|.|+.++...
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~ 119 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSS 119 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCC
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecc
Confidence 468999999999999999999875 4457899999998654
No 101
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=83.99 E-value=4.2 Score=48.29 Aligned_cols=92 Identities=12% Similarity=0.230 Sum_probs=62.6
Q ss_pred eEEEEEEEEeecCCCCccCCCCCCCcEEEEEE--CCEE----EeecccCCCCCCeeccEEEEEeeC---C-CceEEEEEE
Q 003975 367 GTLELGILSAKNLMQMKSKDGKLTDAYCVAKY--GNKW----IRTRTILDTLAPRWNEQYTWDVYD---P-CTVITIGVF 436 (782)
Q Consensus 367 g~l~v~v~~a~~L~~~~~~~~~~~dpyv~v~~--~~~~----~rT~~~~~t~~P~wne~~~f~v~~---~-~~~l~i~v~ 436 (782)
..++|+|..+.++...+ ..+-||.+.+ |++. ..|..+.-..+|.|||.++|++.- | .+.|.|+||
T Consensus 217 ~~f~i~i~~~~~~~~~~-----~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 291 (940)
T 2wxf_A 217 QPFSIELIEGRKVNADE-----RMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALY 291 (940)
T ss_dssp SEEEEEEEEEECCCC--------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred CceEEEEEEecccCCCC-----CceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEE
Confidence 48999999999987521 2378888765 7654 455555557789999999998862 3 679999999
Q ss_pred eCCcC--C---CC-CCCCCCCccEEEEEEcccc
Q 003975 437 DNCYV--N---GS-KDDAKDQRIGKVRIRLSTL 463 (782)
Q Consensus 437 d~~~~--~---~~-~~~~~d~~lG~~~i~l~~l 463 (782)
+...- + .. .....+..||.+.++|-+-
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 292 AVVEKAKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp EEC----------------CEEEEEEEEESBCT
T ss_pred EecCCccCccccccccccccceEEEEeeeEECC
Confidence 95321 1 00 0011345999999999884
No 102
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=82.78 E-value=4.8 Score=36.54 Aligned_cols=125 Identities=13% Similarity=0.152 Sum_probs=79.6
Q ss_pred CceeEEEEEEEEeecCCCCccCCCCCCC--cEEEEEECCEEEeecccCCCCCCeeccEEEEEeeCC--------CceEEE
Q 003975 364 GSIGTLELGILSAKNLMQMKSKDGKLTD--AYCVAKYGNKWIRTRTILDTLAPRWNEQYTWDVYDP--------CTVITI 433 (782)
Q Consensus 364 ~~~g~l~v~v~~a~~L~~~~~~~~~~~d--pyv~v~~~~~~~rT~~~~~t~~P~wne~~~f~v~~~--------~~~l~i 433 (782)
+..+.++|+|.++. +.+.-....+..+ .||.+.+-.....+..+....+|.+|.+-.|.|... ...+.|
T Consensus 15 ~gEnlfEihi~~~~-~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~l 93 (156)
T 2yrb_A 15 RGENLFEIHINKVT-FSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVRGLHPEYNFTSQYLVHVNDLFLQYIQKNTITL 93 (156)
T ss_dssp SSCEEEEEEEEEEC-CCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEESSSCCCCEEEEEEECCSHHHHHHHHHCCEEE
T ss_pred CCCcEEEEEEeEEE-EcHHHHhhccccCCcEEEEEEEeceEeeecccccCCCCCcceEEEEEEEeCHHHHHHHhcCCEEE
Confidence 44568999998887 3221000001124 455555555444444444589999999999988532 237888
Q ss_pred EEEeCCcCCCCCCCCCCCccEEEEEEccccc-CCceEEEEEeeeecCCCCCCcCcEEEEEEEEEE
Q 003975 434 GVFDNCYVNGSKDDAKDQRIGKVRIRLSTLE-TDRIYTHYYPLLLLTPSGLKNNGELHLALRFTC 497 (782)
Q Consensus 434 ~v~d~~~~~~~~~~~~d~~lG~~~i~l~~l~-~~~~~~~w~~L~~~~~~g~~~~G~i~l~~~~~~ 497 (782)
++..... ..-+.||+++|+|.++. ....+..-.+|..... +...-|.|++.+++..
T Consensus 94 ELhqa~g-------~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g-~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 94 EVHQAYS-------TEYETIAACQLKFHEILEKSGRIFCTASLIGTKG-DIPNFGTVEYWFRLRV 150 (156)
T ss_dssp EEEEECS-------SCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSS-CCTTSEEEEEEEEEEE
T ss_pred EEEEeeC-------CCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCC-CcceEEEEEEEEEEec
Confidence 8888541 24578999999999986 3444566667764321 2134699999998854
No 103
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=80.67 E-value=5.3 Score=47.86 Aligned_cols=91 Identities=19% Similarity=0.259 Sum_probs=62.0
Q ss_pred eeEEEEEEEEeecCCCCccCCCCCC-CcEEEEEE--CCEE----EeecccCCCCCCeeccEEEEEeeC---C-CceEEEE
Q 003975 366 IGTLELGILSAKNLMQMKSKDGKLT-DAYCVAKY--GNKW----IRTRTILDTLAPRWNEQYTWDVYD---P-CTVITIG 434 (782)
Q Consensus 366 ~g~l~v~v~~a~~L~~~~~~~~~~~-dpyv~v~~--~~~~----~rT~~~~~t~~P~wne~~~f~v~~---~-~~~l~i~ 434 (782)
...++|+|+.+.++.... ... +-||.+.+ |++. .+|+.+. ..+|.|||.++|++.- | .+.|.|+
T Consensus 354 ~~~f~v~i~~~~~~n~~~----~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~t 428 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNI----RDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLS 428 (1091)
T ss_dssp CSEEEEEEEEESCCCCCC----SSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEE
T ss_pred CCCEEEEEEEecCCCCCc----cccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEE
Confidence 358999999999886422 223 88998877 6542 4444433 5578899999998862 3 7799999
Q ss_pred EEeCCcCCCCCCCCCCCccEEEEEEcccc
Q 003975 435 VFDNCYVNGSKDDAKDQRIGKVRIRLSTL 463 (782)
Q Consensus 435 v~d~~~~~~~~~~~~d~~lG~~~i~l~~l 463 (782)
||+..... +.......||.+.++|-+-
T Consensus 429 l~~~~~~~--~~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 429 ICSVKGRK--GAKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp ECCCCCCC---------CCEEEEEESBCT
T ss_pred EEEecCcc--CcccccceeEEeeeeeEcc
Confidence 99975421 0011356899999999874
No 104
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=79.83 E-value=5.5 Score=47.32 Aligned_cols=87 Identities=15% Similarity=0.201 Sum_probs=58.8
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCeE----eeeecccCCCCCCcccceeEEEec---CCCCCeEEEEEEEc
Q 003975 203 YLRVFVFEAQDLVPSDKGRAPDACVRIQL--GNQL----RVTRPSHVRSVNPVWNEEHMFVAS---EPFEDLIIVTVEDR 273 (782)
Q Consensus 203 ~L~V~V~~a~~L~~~~~~~~~dpyv~v~l--~~~~----~~T~~~~~~t~nP~wne~f~f~v~---~~~~~~l~i~V~d~ 273 (782)
.++|+|.++.++... ...+-||++.+ |++. ..|+.+.. ..+|.|||.+.|++. -|.+..|.|+||+.
T Consensus 218 ~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~-~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 293 (940)
T 2wxf_A 218 PFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNV-CSEPVWKQRLEFDISVCDLPRMARLCFALYAV 293 (940)
T ss_dssp EEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEES-CSSCEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred ceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccC-CCCcccceEEEcccccccCCcccEEEEEEEEe
Confidence 599999999998754 33677877666 5543 34444443 678999999999763 45688999999986
Q ss_pred cCC--C----------CCceeEEEEEeCCCcc
Q 003975 274 IRP--G----------KDEILGRELIPVRNVP 293 (782)
Q Consensus 274 ~~~--~----------~d~~iG~~~i~l~~l~ 293 (782)
... + .+..+|.+.+++-+-.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 294 VEKAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp C----------------CEEEEEEEEESBCTT
T ss_pred cCCccCccccccccccccceEEEEeeeEECCc
Confidence 321 1 2457888888876543
No 105
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=72.10 E-value=11 Score=36.33 Aligned_cols=59 Identities=10% Similarity=0.121 Sum_probs=41.2
Q ss_pred EEEeecccCCCCCCeeccEEEEEeeC---CCceEEEEEEeCCcCCCCCCCCCCCccEEEEEEcc
Q 003975 401 KWIRTRTILDTLAPRWNEQYTWDVYD---PCTVITIGVFDNCYVNGSKDDAKDQRIGKVRIRLS 461 (782)
Q Consensus 401 ~~~rT~~~~~t~~P~wne~~~f~v~~---~~~~l~i~v~d~~~~~~~~~~~~d~~lG~~~i~l~ 461 (782)
..++|.+.+.+.+|.|+|++.+.+.. +..-|.+++++-..-.. +...+..+|.+.+||-
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k--~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDS--KDKSEKIFALAFVKLM 138 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSS--CCCCCCEEEEEEEESB
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEeccccc--ccccCCeeEEEEEEcc
Confidence 35889999999999999999998874 35689999987653110 0112346777666554
No 106
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=71.76 E-value=8.3 Score=46.24 Aligned_cols=88 Identities=17% Similarity=0.109 Sum_probs=59.2
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe----EeeeecccCCCCCCcccceeEEEec---CCCCCeEEEEEEEc
Q 003975 203 YLRVFVFEAQDLVPSDKGRAPDACVRIQL--GNQ----LRVTRPSHVRSVNPVWNEEHMFVAS---EPFEDLIIVTVEDR 273 (782)
Q Consensus 203 ~L~V~V~~a~~L~~~~~~~~~dpyv~v~l--~~~----~~~T~~~~~~t~nP~wne~f~f~v~---~~~~~~l~i~V~d~ 273 (782)
.++|+|..+.++.... ....+-||++.+ |++ ...|+.+. ..+|.|||...|.+. -|....|.|+||+.
T Consensus 356 ~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~~~--~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~ 432 (1091)
T 3hhm_A 356 ALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQRVP--CSNPRWNEWLNYDIYIPDLPRAARLCLSICSV 432 (1091)
T ss_dssp EEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCCCC--TTSCEEEEEEEEEEEGGGCCTTCEEEEEECCC
T ss_pred CEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccccC--CCCCCCCeeEEecCccccCChhcEEEEEEEEe
Confidence 5899999998876432 334677888887 443 23344332 567889999999863 45688999999986
Q ss_pred cCC----CCCceeEEEEEeCCCcc
Q 003975 274 IRP----GKDEILGRELIPVRNVP 293 (782)
Q Consensus 274 ~~~----~~d~~iG~~~i~l~~l~ 293 (782)
... .....||.+.++|-+..
T Consensus 433 ~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 433 KGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCC-------CCEEEEEESBCTT
T ss_pred cCccCcccccceeEEeeeeeEccC
Confidence 542 13457888888876543
No 107
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=68.88 E-value=5.1 Score=48.24 Aligned_cols=93 Identities=14% Similarity=0.178 Sum_probs=60.2
Q ss_pred eeEEEEEEEEeecCCCCccCCCCCCCcEEEEE--ECCEE----EeecccCCCCCCeeccEEEEEeeC---C-CceEEEEE
Q 003975 366 IGTLELGILSAKNLMQMKSKDGKLTDAYCVAK--YGNKW----IRTRTILDTLAPRWNEQYTWDVYD---P-CTVITIGV 435 (782)
Q Consensus 366 ~g~l~v~v~~a~~L~~~~~~~~~~~dpyv~v~--~~~~~----~rT~~~~~t~~P~wne~~~f~v~~---~-~~~l~i~v 435 (782)
...++|+|..+.++...+ ..+-||.+. .|++. ..|..+.-+.+|.|||.+.|++.- | .+.|.|+|
T Consensus 352 ~~~f~i~i~~~~~~~~~~-----~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti 426 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTEE-----TVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAV 426 (1092)
T ss_dssp CSEEEEEECCCCCCCCCS-----SCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEEC
T ss_pred CCCEEEEEEEeccCCCCC-----CceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEE
Confidence 358999999999987531 227777754 47765 445555557789999999998863 3 67999999
Q ss_pred EeCCcCCCCC----------------CCCCCCccEEEEEEcccc
Q 003975 436 FDNCYVNGSK----------------DDAKDQRIGKVRIRLSTL 463 (782)
Q Consensus 436 ~d~~~~~~~~----------------~~~~d~~lG~~~i~l~~l 463 (782)
|+......+. ....+..||.+.++|-+-
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 470 (1092)
T 2y3a_A 427 YAVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDF 470 (1092)
T ss_dssp CCC------------------------------CCEEEEESBCT
T ss_pred EEecCccccccccccccccccccccccccccceeEEEeeeeECC
Confidence 9964211000 011235899999999874
No 108
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=61.81 E-value=27 Score=41.55 Aligned_cols=70 Identities=17% Similarity=0.232 Sum_probs=46.4
Q ss_pred EEEEEEEEeeCCCCCCCCCCCCcEEEEEE--CCe---EeeeccccCCCCCccccEEEEEec--c-CCCCeEEEEEEeCC
Q 003975 41 YLCVNVVKARNLPVMDVSGSLDPYVEVKL--GNY---KGITKHLEKNQNPVWNQIFAFSKE--R-LQSSLLEVTVKDKD 111 (782)
Q Consensus 41 ~L~V~v~~a~~L~~~d~~g~~dPyv~v~~--~~~---~~kT~~i~~t~nP~Wne~f~f~~~--~-~~~~~L~i~V~d~d 111 (782)
.+.|+|.++....... +..++-||++.+ |++ ..+|+.+.-+.+|.|||.+.|++. + +.+..|.|+||+..
T Consensus 219 ~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 219 KFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp EEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred ceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 5788888887522111 234567777655 653 234555555668999999998864 3 45788999999853
No 109
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=61.72 E-value=6.4 Score=47.44 Aligned_cols=69 Identities=14% Similarity=0.223 Sum_probs=49.7
Q ss_pred eEEEEEEEEeeCCCCCCCCCCCCcEEEEE--ECCe----EeeeccccCCCCCccccEEEEEec--c-CCCCeEEEEEEeC
Q 003975 40 HYLCVNVVKARNLPVMDVSGSLDPYVEVK--LGNY----KGITKHLEKNQNPVWNQIFAFSKE--R-LQSSLLEVTVKDK 110 (782)
Q Consensus 40 ~~L~V~v~~a~~L~~~d~~g~~dPyv~v~--~~~~----~~kT~~i~~t~nP~Wne~f~f~~~--~-~~~~~L~i~V~d~ 110 (782)
..+.|+|.++.++... ..++-||.+. -|++ ..+|+.+.-..+|.|||.+.|++. + +.+..|.|+||+.
T Consensus 353 ~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~~ 429 (1092)
T 2y3a_A 353 NPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYAV 429 (1092)
T ss_dssp SEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCCC
T ss_pred CCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEEe
Confidence 4799999999998754 3456676644 4664 245665555678999999998864 3 3478899999996
Q ss_pred C
Q 003975 111 D 111 (782)
Q Consensus 111 d 111 (782)
.
T Consensus 430 ~ 430 (1092)
T 2y3a_A 430 L 430 (1092)
T ss_dssp -
T ss_pred c
Confidence 4
No 110
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=61.32 E-value=20 Score=42.73 Aligned_cols=88 Identities=19% Similarity=0.206 Sum_probs=53.9
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCeE---eeeecccCCCCCCcccceeEEEec---CCCCCeEEEEEEEcc
Q 003975 203 YLRVFVFEAQDLVPSDKGRAPDACVRIQL--GNQL---RVTRPSHVRSVNPVWNEEHMFVAS---EPFEDLIIVTVEDRI 274 (782)
Q Consensus 203 ~L~V~V~~a~~L~~~~~~~~~dpyv~v~l--~~~~---~~T~~~~~~t~nP~wne~f~f~v~---~~~~~~l~i~V~d~~ 274 (782)
.++|.|..+...... .+..++-||++.+ |++. .+|+.+.- +.+|.|||.+.|.+. -|.+..|.|+||+..
T Consensus 219 ~f~i~i~~~~~~~~~-~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~-~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 219 KFRVKIRGIDIPVLP-RTADLTVFVEANIQYGQQVLCQRRTSPKPF-TEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp EEEEEEEEEECSSCC-TTSCEEEEEEEEEEETTEEEEEEECCCEEC-CSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred ceEEEEeeccccccc-CCCCceEEEEEEEEECCEEcccceeecccc-CCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 478888887642211 1234577877655 6543 33444333 668999999988763 456889999999854
Q ss_pred CCC----------------CCceeEEEEEeCCCc
Q 003975 275 RPG----------------KDEILGRELIPVRNV 292 (782)
Q Consensus 275 ~~~----------------~d~~iG~~~i~l~~l 292 (782)
..+ ....+|.+.++|-+.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~ 330 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDH 330 (961)
T ss_dssp C--------------------CEEEEEEEESBCT
T ss_pred cCccccccccccccccccccceeEEEEeeeeecC
Confidence 321 234677777776543
No 111
>1gk7_A Vimentin; intermediate filament, heptad repeat; 1.4A {Homo sapiens} SCOP: h.1.20.1 PDB: 3g1e_A
Probab=28.32 E-value=41 Score=22.59 Aligned_cols=19 Identities=16% Similarity=0.403 Sum_probs=16.7
Q ss_pred hHHHHHHHHhhHHHHHHhc
Q 003975 696 QLQTMVGDLASQVERAQAI 714 (782)
Q Consensus 696 ~vq~~l~~~a~~~e~~~n~ 714 (782)
++|++-+.+|++++|++.+
T Consensus 7 ~mq~LNdrlAsyidkVR~L 25 (39)
T 1gk7_A 7 ELQELNDRFANYIDKVRFL 25 (39)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3889999999999999875
No 112
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=24.04 E-value=1.3e+02 Score=24.33 Aligned_cols=38 Identities=13% Similarity=0.341 Sum_probs=26.8
Q ss_pred HHHHHhhhhhhHHHHHHHHhhHHHHHHhcccccChhhH
Q 003975 686 RYERLRSVGGQLQTMVGDLASQVERAQAILCWRDLRAT 723 (782)
Q Consensus 686 ~~~~~~~~~~~vq~~l~~~a~~~e~~~n~~~w~~p~~s 723 (782)
+++.|.+-+..++..-..+.....+++.-+-|+.-+..
T Consensus 34 kL~~L~~kt~~L~~~s~~F~~~A~~l~rkmwwkn~K~~ 71 (91)
T 3hd7_A 34 KLSELDDRADALQAGASQFETSAAKLKRKYWWKNLKMM 71 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555666777777777777788888889886654
Done!