Your job contains 1 sequence.
>003977
MKAFEGTMMIHQPLPALSNSTKLLLFAPTFSHKLCRSFSAASPAHEMGLRLSKKASSGNT
PRHFNKTSSSVKHTTPSAYNQPTQERVLEEESPRVSETTLPLKTSQGQAFPIGVSEVENG
INFAIFSQHATAVTLCLSLPKREKLDWQDGGMIELPLDPRVNKTGDIWHICIEDLPRSEV
LYGYRVDGPRDWHQGHRFDSSIVLIDPYAKLVEGRRHFGDASAKLSKFLGTYEFESLPFD
WGDNYKLPNIPEKDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKIPHLLELGINAVE
LLPVFEFDEMEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKA
LHGAGIEVILDVVYNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCN
HPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCK
IIAEPWDCRGLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYR
VNKRKPYHSINFIIAHDGFTLYDLVSYNYKHNEANGEGGNDGCNDNFSWNCGFEGETDDA
SIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETK
KNSHYRFFSEVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIY
LAFNAHDFFVKVSLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLSPYSSILLE
AK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003977
(782 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2122343 - symbol:ISA3 "isoamylase 3" species:3... 2958 2.6e-308 1
TAIR|locus:2061216 - symbol:ISA1 "isoamylase 1" species:3... 799 4.4e-154 2
UNIPROTKB|Q8EGU6 - symbol:glgX "Glycogen isoamylase GlgX"... 998 1.3e-100 1
TIGR_CMR|SO_1495 - symbol:SO_1495 "glycogen operon protei... 998 1.3e-100 1
UNIPROTKB|P15067 - symbol:glgX species:83333 "Escherichia... 853 3.0e-85 1
UNIPROTKB|Q9KKS1 - symbol:VC_A1029 "Glycogen operon prote... 747 3.2e-77 2
TIGR_CMR|VC_A1029 - symbol:VC_A1029 "glycogen operon prot... 747 3.2e-77 2
TAIR|locus:2014500 - symbol:DBE1 "debranching enzyme 1" s... 625 4.4e-61 1
TIGR_CMR|BA_2728 - symbol:BA_2728 "pullulanase, putative"... 321 2.2e-32 2
UNIPROTKB|Q81KP1 - symbol:BAS4597 "Putative pullulanase" ... 319 7.9e-31 2
TIGR_CMR|BA_4953 - symbol:BA_4953 "pullulanase, putative"... 319 7.9e-31 2
TAIR|locus:2179919 - symbol:LDA "limit dextrinase" specie... 215 1.2e-23 5
TIGR_CMR|CPS_0996 - symbol:CPS_0996 "alpha amylase family... 198 7.7e-20 4
TIGR_CMR|CPS_1694 - symbol:CPS_1694 "putative pullulanase... 211 1.5e-13 3
UNIPROTKB|G4NAD9 - symbol:MGG_03186 "1,4-alpha-glucan-bra... 176 4.0e-10 2
TAIR|locus:2092349 - symbol:EMB2729 "EMBRYO DEFECTIVE 272... 131 4.0e-10 3
CGD|CAL0000583 - symbol:GLC3 species:5476 "Candida albica... 145 2.7e-09 2
ASPGD|ASPL0000046871 - symbol:AN2314 species:162425 "Emer... 157 2.6e-08 3
TIGR_CMR|BA_4230 - symbol:BA_4230 "alpha-amylase" species... 149 6.1e-08 2
DICTYBASE|DDB_G0274105 - symbol:glgB "branching enzyme" s... 147 1.4e-07 3
ZFIN|ZDB-GENE-110411-171 - symbol:si:ch211-213e17.1 "si:c... 142 5.2e-07 3
TIGR_CMR|GSU_2358 - symbol:GSU_2358 "isoamylase family pr... 135 1.2e-06 2
ZFIN|ZDB-GENE-110914-16 - symbol:si:ch211-247m23.1 "si:ch... 139 1.2e-06 3
UNIPROTKB|Q9KNE8 - symbol:glgB "1,4-alpha-glucan branchin... 102 1.8e-06 4
TIGR_CMR|VC_A0016 - symbol:VC_A0016 "1,4-alpha-glucan bra... 102 1.8e-06 4
UNIPROTKB|F1PX32 - symbol:GBE1 "Uncharacterized protein" ... 140 7.1e-06 3
UNIPROTKB|E1C303 - symbol:GBE1 "Uncharacterized protein" ... 138 7.2e-06 3
MGI|MGI:1921435 - symbol:Gbe1 "glucan (1,4-alpha-), branc... 136 7.6e-06 3
RGD|1309968 - symbol:Gbe1 "glucan (1,4-alpha-), branching... 133 1.1e-05 3
TAIR|locus:2044903 - symbol:SBE2.1 "starch branching enzy... 128 1.1e-05 2
UNIPROTKB|F1SK65 - symbol:F1SK65 "Uncharacterized protein... 133 1.4e-05 1
UNIPROTKB|E9PGM4 - symbol:GBE1 "1,4-alpha-glucan-branchin... 139 1.7e-05 2
TAIR|locus:2144608 - symbol:SBE2.2 "starch branching enzy... 129 2.0e-05 2
UNIPROTKB|Q04446 - symbol:GBE1 "1,4-alpha-glucan-branchin... 139 2.0e-05 2
FB|FBgn0053138 - symbol:AGBE "1,4-Alpha-Glucan Branching ... 124 2.5e-05 3
UNIPROTKB|Q01401 - symbol:SBE1 "1,4-alpha-glucan-branchin... 129 6.6e-05 2
UNIPROTKB|F1MZP0 - symbol:GBE1 "Uncharacterized protein" ... 133 7.2e-05 2
SGD|S000000737 - symbol:GLC3 "Glycogen branching enzyme, ... 131 9.0e-05 1
TIGR_CMR|BA_4231 - symbol:BA_4231 "oligo-1,6-glucosidase"... 85 9.3e-05 4
UNIPROTKB|O07176 - symbol:treS "Trehalose synthase/amylas... 77 0.00012 4
UNIPROTKB|A0R6E0 - symbol:treS "Trehalose synthase/amylas... 80 0.00017 4
UNIPROTKB|Q10625 - symbol:glgB "1,4-alpha-glucan branchin... 121 0.00017 2
UNIPROTKB|Q9KTJ1 - symbol:VC0911 "Trehalose-6-phosphate h... 71 0.00057 4
TIGR_CMR|VC_0911 - symbol:VC_0911 "trehalose-6-phosphate ... 71 0.00057 4
>TAIR|locus:2122343 [details] [associations]
symbol:ISA3 "isoamylase 3" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0004556 "alpha-amylase activity" evidence=ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0043169 "cation
binding" evidence=IEA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009569 "chloroplast starch grain" evidence=IDA]
[GO:0005983 "starch catabolic process" evidence=IMP] [GO:0019156
"isoamylase activity" evidence=IDA] [GO:0000272 "polysaccharide
catabolic process" evidence=RCA] [GO:0005982 "starch metabolic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0019252 "starch biosynthetic
process" evidence=RCA] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02922
UniPathway:UPA00153 InterPro:IPR013780 GO:GO:0009570
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180
PANTHER:PTHR10357 CAZy:CBM48 GO:GO:0005983 InterPro:IPR014756
SUPFAM:SSF81296 EMBL:AL161513 eggNOG:COG1523 HOGENOM:HOG000239197
KO:K02438 HSSP:P10342 GO:GO:0019156 EMBL:AY091058 EMBL:AY133739
EMBL:AK227049 IPI:IPI00519580 PIR:B85091 RefSeq:NP_192641.2
UniGene:At.33717 ProteinModelPortal:Q9M0S5 SMR:Q9M0S5 STRING:Q9M0S5
PaxDb:Q9M0S5 PRIDE:Q9M0S5 EnsemblPlants:AT4G09020.1 GeneID:826481
KEGG:ath:AT4G09020 TAIR:At4g09020 InParanoid:Q8RWW6 OMA:VPTVWPG
PhylomeDB:Q9M0S5 ProtClustDB:CLSN2915032
BioCyc:ARA:AT4G09020-MONOMER BioCyc:MetaCyc:AT4G09020-MONOMER
Genevestigator:Q9M0S5 GO:GO:0009569 Uniprot:Q9M0S5
Length = 764
Score = 2958 (1046.3 bits), Expect = 2.6e-308, P = 2.6e-308
Identities = 547/770 (71%), Positives = 628/770 (81%)
Query: 14 LPALSNSTKLLLFAPTFSHKLCRSFSAASPAHEMGLRLSKKASSGNTPRHFNKTSSSVKH 73
L + S+S+ F+ FS L +FS++ MGL+LS++ + K S++K
Sbjct: 2 LTSPSSSSTYDPFSSNFSPSLTNAFSSSFTI-PMGLKLSRRVTRARIFSRKIKDRSTLKV 60
Query: 74 TTPSAYNQPTQERVLEEESPRVSETTLPLKTSQGQAFPIGVSEVENGINFAIFSQHATAV 133
T A+ ERV+EEE+ ++ET L K S G+ P+GVS+V+ GINFA+FSQ+AT+V
Sbjct: 61 TCRRAH-----ERVVEEEASTMTETKL-FKVSSGEVSPLGVSQVDKGINFALFSQNATSV 114
Query: 134 TLCLSLPKREKLDWQDGGMIELPLDPRVNKTGDIWHICIEDLPRSEVLYGYRVDGPRDWH 193
TLCLSL + K D D GMIEL LDP VNKTGD WHIC+EDLP + VLYGYRVDGP +W
Sbjct: 115 TLCLSLSQSGKDDTDDDGMIELVLDPSVNKTGDTWHICVEDLPLNNVLYGYRVDGPGEWQ 174
Query: 194 QGHRFDSSIVLIDPYAKLVEGRRHFGDASAKLSKFLGTYEFESLPFDWGDNYKLPNIPEK 253
QGHRFD SI+L+DPYAKLV+G FGD+S K ++F GTY+FES PFDWGD+YK PNIPEK
Sbjct: 175 QGHRFDRSILLLDPYAKLVKGHSSFGDSSQKFAQFYGTYDFESSPFDWGDDYKFPNIPEK 234
Query: 254 DLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKIPHLLELGINAVELLPVFEFDEMEFQ 313
DLVIYEMNVRAFT DESSG+DP I GSYLG I+KIPHL +LGINAVELLPVFEFDE+E Q
Sbjct: 235 DLVIYEMNVRAFTADESSGMDPAIGGSYLGFIEKIPHLQDLGINAVELLPVFEFDELELQ 294
Query: 314 RRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVV 373
RR NPRDHMVNTWGYST+NFF+PMSRYA+G G P+KAS EFKEMVKALH AGIEVILDVV
Sbjct: 295 RRSNPRDHMVNTWGYSTVNFFAPMSRYASGEGDPIKASKEFKEMVKALHSAGIEVILDVV 354
Query: 374 YNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLR 433
YNHTNEADD PYTTSFRGIDNKVYYM+D QLLN++GCGNTLNCNHPVVMELILDSLR
Sbjct: 355 YNHTNEADDKYPYTTSFRGIDNKVYYMLDPNNQLLNFSGCGNTLNCNHPVVMELILDSLR 414
Query: 434 HWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDCRGLYL 493
HWV EYHVDGFRFDLASVLCR TDGSPL+APPLIRAIAKD++LSRCKIIAEPWDC GLYL
Sbjct: 415 HWVTEYHVDGFRFDLASVLCRATDGSPLSAPPLIRAIAKDSVLSRCKIIAEPWDCGGLYL 474
Query: 494 VGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFI 553
VGKFPNWDRWAEWNG YRDD+R+FIKGD GMKG ATR+SGSSDLY+VN+RKPYH +NF+
Sbjct: 475 VGKFPNWDRWAEWNGMYRDDVRRFIKGDSGMKGSFATRVSGSSDLYQVNQRKPYHGVNFV 534
Query: 554 IAHDGFTLYDLVSYNYKHXXXXXXXXXXXXXXXFSWNCGFEGETDDASIKALRSRQMKNF 613
IAHDGFTL DLVSYN+KH SWNCGFEGET DA IK+LR+RQMKNF
Sbjct: 535 IAHDGFTLRDLVSYNFKHNEANGEGGNDGCNDNHSWNCGFEGETGDAHIKSLRTRQMKNF 594
Query: 614 HLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIK 673
HLALM+SQGTPMMLMGDEYGHTRYGNNNSYGHDT++NNFQW +L+ KK +H+RFFSEVIK
Sbjct: 595 HLALMISQGTPMMLMGDEYGHTRYGNNNSYGHDTSLNNFQWKELDAKKQNHFRFFSEVIK 654
Query: 674 FRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDN-NGADIYLAFNAHDFFVKV 732
FR S V E+FL ++TWHEDNWDN +SKFLAFTLHD G DIY+AFNAHD+FVK
Sbjct: 655 FRHSHHVLKHENFLTQGEITWHEDNWDNSESKFLAFTLHDGIGGRDIYVAFNAHDYFVKA 714
Query: 733 SLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLSPYSSILLEAK 782
+P PPP +QWFRV DTNLESPDD V EG AG TYN++P+SSILL++K
Sbjct: 715 LIPQPPPGKQWFRVADTNLESPDDFVREGVAGVADTYNVAPFSSILLQSK 764
>TAIR|locus:2061216 [details] [associations]
symbol:ISA1 "isoamylase 1" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0004556 "alpha-amylase activity" evidence=ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0043169 "cation
binding" evidence=IEA] [GO:0010021 "amylopectin biosynthetic
process" evidence=IMP] [GO:0010368 "chloroplast isoamylase complex"
evidence=IDA] [GO:0019156 "isoamylase activity" evidence=IDA;IMP]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0019252
"starch biosynthetic process" evidence=RCA] [GO:0043085 "positive
regulation of catalytic activity" evidence=RCA] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF00128 Pfam:PF02922 UniPathway:UPA00152 InterPro:IPR013780
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180
PANTHER:PTHR10357 CAZy:CBM48 InterPro:IPR014756 SUPFAM:SSF81296
EMBL:AF002109 UniGene:At.20831 UniGene:At.71018 GO:GO:0010021
GO:GO:0019252 eggNOG:COG1523 HOGENOM:HOG000239197 KO:K02438
EMBL:BT000443 EMBL:BT010348 IPI:IPI00520721 PIR:B84823
RefSeq:NP_181522.1 HSSP:P10342 ProteinModelPortal:O04196 SMR:O04196
IntAct:O04196 STRING:O04196 PaxDb:O04196 PRIDE:O04196 ProMEX:O04196
EnsemblPlants:AT2G39930.1 GeneID:818580 KEGG:ath:AT2G39930
TAIR:At2g39930 InParanoid:O04196 OMA:HAFVNDQ PhylomeDB:O04196
ProtClustDB:CLSN2683381 BRENDA:3.2.1.68 Genevestigator:O04196
GO:GO:0010368 GO:GO:0019156 Uniprot:O04196
Length = 783
Score = 799 (286.3 bits), Expect = 4.4e-154, Sum P(2) = 4.4e-154
Identities = 173/381 (45%), Positives = 235/381 (61%)
Query: 91 ESPRVSETTLPLKT-----SQGQAFPIGVSEVENGINFAIFSQHATAVTLCL-SLPKREK 144
E+ ++ PLK+ S G P G + ++G+NF+++S ++ + T+CL SL
Sbjct: 51 EAENIAVVEKPLKSDRFFISDGLPSPFGPTVRDDGVNFSVYSTNSVSATICLISLSDLR- 109
Query: 145 LDWQDGGMIELPLDPRVNKTGDIWHICIEDLPRSEVLYGYRVDGPRDWHQGHRFDSSIVL 204
Q+ E+ LDP N+TG +WH+ + ++LYGYR DG +GH +DSS +L
Sbjct: 110 ---QNKVTEEIQLDPSRNRTGHVWHVFLRG-DFKDMLYGYRFDGKFSPEEGHYYDSSNIL 165
Query: 205 IDPYAKLVEGRRHFG----DASA--KLSKFLGTYEFESLPFDWGDNYKLPNIPEKDLVIY 258
+DPYAK + R FG D + +++ + T E E FDW + L +P+KDLVIY
Sbjct: 166 LDPYAKAIISRDEFGVLGPDDNCWPQMACMVPTREEE---FDWEGDMHL-KLPQKDLVIY 221
Query: 259 EMNVRAFTGDESSGLDPEIRGSYLGLIQKIPHLLELGINAVELLPVFEFDEMEFQRRRNP 318
EM+VR FT ESS + E G+Y G+ +K+ HL ELGIN +EL+P EF+E+E+
Sbjct: 222 EMHVRGFTRHESSKI--EFPGTYQGVAEKLDHLKELGINCIELMPCHEFNELEYYSYNTI 279
Query: 319 R-DHMVNTWGYSTINFFSPMSRYAAGGGGPL--KASWEFKEMVKALHGAGIEVILDVVYN 375
DH VN WGYSTI FFSPM RYA+ +A EFK +VK H GIEVI+DVV N
Sbjct: 280 LGDHRVNFWGYSTIGFFSPMIRYASASSNNFAGRAINEFKILVKEAHKRGIEVIMDVVLN 339
Query: 376 HTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHW 435
HT E ++ P SFRG+DN VYYM+ G+ NY+GCGNT NCNHPVV + ILD LR+W
Sbjct: 340 HTAEGNEKGPIF-SFRGVDNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFILDCLRYW 398
Query: 436 VVEYHVDGFRFDLASVLCRGT 456
V E HVDGFRFDL S++ R +
Sbjct: 399 VTEMHVDGFRFDLGSIMSRSS 419
Score = 725 (260.3 bits), Expect = 4.4e-154, Sum P(2) = 4.4e-154
Identities = 148/311 (47%), Positives = 189/311 (60%)
Query: 456 TDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDCRGLYLVGKFPNWDRWAEWNGKYRDDLR 515
T G+P++ PP+I I+ D IL K+IAE WD GLY VG FP+W W+EWNGK+RD +R
Sbjct: 438 TTGTPISCPPVIDMISNDPILRGVKLIAEAWDAGGLYQVGMFPHWGIWSEWNGKFRDVVR 497
Query: 516 KFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHXXXX 575
+FIKG G G A + GS +LY+ RKP+HSINFI AHDGFTL DLV+YN K+
Sbjct: 498 QFIKGTDGFSGAFAECLCGSPNLYQ-GGRKPWHSINFICAHDGFTLADLVTYNNKNNLAN 556
Query: 576 XXXXXXXXXXXFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHT 635
+SWNCG EG+ S+K LR RQM+NF ++LMVSQG PM+ MGDEYGHT
Sbjct: 557 GEENNDGENHNYSWNCGEEGDFASISVKRLRKRQMRNFFVSLMVSQGVPMIYMGDEYGHT 616
Query: 636 RYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRRVFGREDFLNINDVTWH 695
+ GNNN+Y HD +N F+W + E + +RF +IKFR G DF + WH
Sbjct: 617 KGGNNNTYCHDNYMNYFRWDKKEEAHSDFFRFCRILIKFRDECESLGLNDFPTAKRLQWH 676
Query: 696 E-----DNWDNYDSKFLAFTLHDNNGADIYLAFNAHDFFVKVSLPPPPPKRQWFRVVDTN 750
NW S+F+AF+L D+ +IY+AFN VSLP P R W VDT+
Sbjct: 677 GLAPEIPNWSE-TSRFVAFSLVDSVKKEIYVAFNTSHLATLVSLPNRPGYR-WEPFVDTS 734
Query: 751 LESPDD-IVPE 760
SP D I P+
Sbjct: 735 KPSPYDCITPD 745
Score = 39 (18.8 bits), Expect = 1.2e-81, Sum P(2) = 1.2e-81
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 434 HWVVEYHVDG-FRFDLASVLCRGTDG 458
HW + +G FR D+ +GTDG
Sbjct: 481 HWGIWSEWNGKFR-DVVRQFIKGTDG 505
>UNIPROTKB|Q8EGU6 [details] [associations]
symbol:glgX "Glycogen isoamylase GlgX" species:211586
"Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR011837 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF00128 Pfam:PF02922 InterPro:IPR013780 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GO:GO:0004553 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014756 SUPFAM:SSF81296
GO:GO:0005980 HOGENOM:HOG000239197 KO:K02438 PANTHER:PTHR10357:SF74
TIGRFAMs:TIGR02100 HSSP:P10342 GO:GO:0004133 RefSeq:NP_717112.1
ProteinModelPortal:Q8EGU6 GeneID:1169306 KEGG:son:SO_1495
PATRIC:23522634 OMA:TWDGLGT ProtClustDB:CLSK906290 Uniprot:Q8EGU6
Length = 750
Score = 998 (356.4 bits), Expect = 1.3e-100, P = 1.3e-100
Identities = 245/612 (40%), Positives = 337/612 (55%)
Query: 99 TLPLKTSQGQAFPIGVSEVENGINFAIFSQHATAVTLCLSLPKREKLDWQDGGMIELPLD 158
+LP S G+AFP+G + + G+NFA+FS HAT V LCL D Q G +E+
Sbjct: 12 SLPYSVSAGKAFPLGATVDDGGVNFALFSAHATGVELCL-------FDAQ--GKVEIQRI 62
Query: 159 PRVNKTGDIWHICIEDLPRSEVLYGYRVDGPRDWHQGHRFDSSIVLIDPYAKLVEGRRH- 217
+T IWH+ + L + LYGYRV GP + GHRF+ +L+DPYA+ + GR H
Sbjct: 63 ALTEQTQQIWHLYVHGLCAGQ-LYGYRVYGPYEPQLGHRFNPHKLLLDPYARQLVGRYHH 121
Query: 218 ----FG---------------DASAKLSK--------FLGTYEFESL-PFDWGDNYKLPN 249
FG D +A + K L E +++ P ++ P
Sbjct: 122 HIANFGYELDNPNEDLSFSTLDNAAYMPKCKVVDIRPLLAAAESQAIRPLS---PHRNP- 177
Query: 250 IPEKDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQK--IPHLLELGINAVELLPVFEF 307
+P + +IYEM+++ FT +D +RG++ GL K I +L++LG+N VELLP+ F
Sbjct: 178 LPIEQCIIYEMHLKGFTALHPE-IDVPLRGTFAGLASKAAIDYLVKLGVNCVELLPIQAF 236
Query: 308 DEMEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIE 367
F + + N WGY++I FF+P Y + + EF+ MV ALHGAGIE
Sbjct: 237 FSEPFLLEKQ----LSNYWGYNSIGFFAPEPSYLSS-----EDIIEFRTMVDALHGAGIE 287
Query: 368 VILDVVYNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQ--LLNYAGCGNTLNCNHPVVM 425
VILDVVYNH+ E P T SFRGIDN YY + + +N GCGNTLN NHP ++
Sbjct: 288 VILDVVYNHSAEGSRLGP-TFSFRGIDNLSYYRLHPNDKRFYINDTGCGNTLNLNHPRML 346
Query: 426 ELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEP 485
+L+LDSLR+WV VDGFRFDLA+ L R G + A+ +D +L R K+IAEP
Sbjct: 347 QLVLDSLRYWVKVMGVDGFRFDLAASLGREAYGFDPGSG-FFDALLQDPVLCRVKLIAEP 405
Query: 486 WDCR-GLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKR 544
WD G Y +G FP ++EWN +YRD +R+F +GD GM A R GS D + + R
Sbjct: 406 WDIGPGGYQLGNFPV--AFSEWNDRYRDTMRRFWRGDHGMLPEFARRFHGSGDFFEHSGR 463
Query: 545 KPYHSINFIIAHDGFTLYDLVSYNYKHXXXXXXXXXXXXXXXFSWNCGFEGETDDASIKA 604
P SINF+ +HDGFTL DLVSY +H FS++ G EG ++D S+
Sbjct: 464 PPAASINFLTSHDGFTLKDLVSYCERHNWANGEENRDGHHANFSYHYGVEGASNDVSVLV 523
Query: 605 LRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSH 664
LR+RQ +N L +SQG PM+L GDE G T+ GNNN+Y D +N F W K+
Sbjct: 524 LRARQQRNLLTTLFLSQGVPMLLSGDETGRTQGGNNNAYCQDNPMNWFDWSSEGMDKHL- 582
Query: 665 YRFFSEVIKFRQ 676
F ++I R+
Sbjct: 583 LSFTQQLIALRK 594
>TIGR_CMR|SO_1495 [details] [associations]
symbol:SO_1495 "glycogen operon protein" species:211586
"Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005977 "glycogen metabolic process" evidence=ISS]
InterPro:IPR004193 InterPro:IPR006047 InterPro:IPR011837
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02922
InterPro:IPR013780 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014756 SUPFAM:SSF81296
GO:GO:0005980 HOGENOM:HOG000239197 KO:K02438 PANTHER:PTHR10357:SF74
TIGRFAMs:TIGR02100 HSSP:P10342 GO:GO:0004133 RefSeq:NP_717112.1
ProteinModelPortal:Q8EGU6 GeneID:1169306 KEGG:son:SO_1495
PATRIC:23522634 OMA:TWDGLGT ProtClustDB:CLSK906290 Uniprot:Q8EGU6
Length = 750
Score = 998 (356.4 bits), Expect = 1.3e-100, P = 1.3e-100
Identities = 245/612 (40%), Positives = 337/612 (55%)
Query: 99 TLPLKTSQGQAFPIGVSEVENGINFAIFSQHATAVTLCLSLPKREKLDWQDGGMIELPLD 158
+LP S G+AFP+G + + G+NFA+FS HAT V LCL D Q G +E+
Sbjct: 12 SLPYSVSAGKAFPLGATVDDGGVNFALFSAHATGVELCL-------FDAQ--GKVEIQRI 62
Query: 159 PRVNKTGDIWHICIEDLPRSEVLYGYRVDGPRDWHQGHRFDSSIVLIDPYAKLVEGRRH- 217
+T IWH+ + L + LYGYRV GP + GHRF+ +L+DPYA+ + GR H
Sbjct: 63 ALTEQTQQIWHLYVHGLCAGQ-LYGYRVYGPYEPQLGHRFNPHKLLLDPYARQLVGRYHH 121
Query: 218 ----FG---------------DASAKLSK--------FLGTYEFESL-PFDWGDNYKLPN 249
FG D +A + K L E +++ P ++ P
Sbjct: 122 HIANFGYELDNPNEDLSFSTLDNAAYMPKCKVVDIRPLLAAAESQAIRPLS---PHRNP- 177
Query: 250 IPEKDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQK--IPHLLELGINAVELLPVFEF 307
+P + +IYEM+++ FT +D +RG++ GL K I +L++LG+N VELLP+ F
Sbjct: 178 LPIEQCIIYEMHLKGFTALHPE-IDVPLRGTFAGLASKAAIDYLVKLGVNCVELLPIQAF 236
Query: 308 DEMEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIE 367
F + + N WGY++I FF+P Y + + EF+ MV ALHGAGIE
Sbjct: 237 FSEPFLLEKQ----LSNYWGYNSIGFFAPEPSYLSS-----EDIIEFRTMVDALHGAGIE 287
Query: 368 VILDVVYNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQ--LLNYAGCGNTLNCNHPVVM 425
VILDVVYNH+ E P T SFRGIDN YY + + +N GCGNTLN NHP ++
Sbjct: 288 VILDVVYNHSAEGSRLGP-TFSFRGIDNLSYYRLHPNDKRFYINDTGCGNTLNLNHPRML 346
Query: 426 ELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEP 485
+L+LDSLR+WV VDGFRFDLA+ L R G + A+ +D +L R K+IAEP
Sbjct: 347 QLVLDSLRYWVKVMGVDGFRFDLAASLGREAYGFDPGSG-FFDALLQDPVLCRVKLIAEP 405
Query: 486 WDCR-GLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKR 544
WD G Y +G FP ++EWN +YRD +R+F +GD GM A R GS D + + R
Sbjct: 406 WDIGPGGYQLGNFPV--AFSEWNDRYRDTMRRFWRGDHGMLPEFARRFHGSGDFFEHSGR 463
Query: 545 KPYHSINFIIAHDGFTLYDLVSYNYKHXXXXXXXXXXXXXXXFSWNCGFEGETDDASIKA 604
P SINF+ +HDGFTL DLVSY +H FS++ G EG ++D S+
Sbjct: 464 PPAASINFLTSHDGFTLKDLVSYCERHNWANGEENRDGHHANFSYHYGVEGASNDVSVLV 523
Query: 605 LRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSH 664
LR+RQ +N L +SQG PM+L GDE G T+ GNNN+Y D +N F W K+
Sbjct: 524 LRARQQRNLLTTLFLSQGVPMLLSGDETGRTQGGNNNAYCQDNPMNWFDWSSEGMDKHL- 582
Query: 665 YRFFSEVIKFRQ 676
F ++I R+
Sbjct: 583 LSFTQQLIALRK 594
>UNIPROTKB|P15067 [details] [associations]
symbol:glgX species:83333 "Escherichia coli K-12"
[GO:0006974 "response to DNA damage stimulus" evidence=IEP]
[GO:0043169 "cation binding" evidence=IEA] [GO:0005980 "glycogen
catabolic process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0005977 "glycogen metabolic process"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0004135 "amylo-alpha-1,6-glucosidase activity"
evidence=IDA] [GO:0004133 "glycogen debranching enzyme activity"
evidence=IMP] HAMAP:MF_01248 InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR011837 InterPro:IPR013781 InterPro:IPR015902
InterPro:IPR022844 Pfam:PF00128 Pfam:PF02922 UniPathway:UPA00165
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
PANTHER:PTHR10357 EMBL:U18997 CAZy:CBM48 GO:GO:0006974
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0005980 GO:GO:0004135
EMBL:J01616 PIR:B65139 RefSeq:NP_417889.1 RefSeq:YP_492002.1
PDB:2WSK PDBsum:2WSK ProteinModelPortal:P15067 SMR:P15067
IntAct:P15067 EnsemblBacteria:EBESCT00000000066
EnsemblBacteria:EBESCT00000017349 GeneID:12934523 GeneID:947941
KEGG:ecj:Y75_p3746 KEGG:eco:b3431 PATRIC:32122302 EchoBASE:EB0376
EcoGene:EG10381 eggNOG:COG1523 HOGENOM:HOG000239197 KO:K02438
OMA:HPVMIAY ProtClustDB:PRK03705 BioCyc:EcoCyc:EG10381-MONOMER
BioCyc:ECOL316407:JW3394-MONOMER BioCyc:MetaCyc:EG10381-MONOMER
EvolutionaryTrace:P15067 Genevestigator:P15067
PANTHER:PTHR10357:SF74 TIGRFAMs:TIGR02100 Uniprot:P15067
Length = 657
Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
Identities = 221/568 (38%), Positives = 301/568 (52%)
Query: 107 GQAFPIGVSEVENGINFAIFSQHATAVTLCLSLPKREKLDWQDGGMIELPLDPRVNKTGD 166
G+ P+G G+NF +FS HA V LC+ ++ + +LP +GD
Sbjct: 7 GKPAPLGAHYDGQGVNFTLFSAHAERVELCVFDANGQEHRY------DLP-----GHSGD 55
Query: 167 IWHICIEDLPRSEVLYGYRVDGPRDWHQGHRFDSSIVLIDPYAKLVEGR------RHFG- 219
IWH + D R + YGYRV GP +GHRF+ + +LIDP A+ ++G H G
Sbjct: 56 IWHGYLPDA-RPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQIDGEFKDNPLLHAGH 114
Query: 220 ------DASAKLSKFLGTYEFESLPFDWGDNYKLPNIPEKDLVIYEMNVRAFTGDESSGL 273
D +A K + + +DW D+ P P +IYE +V+ T +
Sbjct: 115 NEPDYRDNAAIAPKCVVVVDH----YDWEDDAP-PRTPWGSTIIYEAHVKGLTYLHPE-I 168
Query: 274 DPEIRGSY--LGLIQKIPHLLELGINAVELLPVFEF-DEMEFQRRRNPRDHMVNTWGYST 330
EIRG+Y LG I +L +LGI A+ELLPV +F E QR + N WGY+
Sbjct: 169 PVEIRGTYKALGHPVMINYLKQLGITALELLPVAQFASEPRLQRMG-----LSNYWGYNP 223
Query: 331 INFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANPYTTSF 390
+ F+ YA P A EF++ +KALH AGIEVILD+V NH+ E D P S
Sbjct: 224 VAMFALHPAYACS---PETALDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPLF-SL 279
Query: 391 RGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLAS 450
RGIDN+ YY + G N+ GCGNTLN +HP V++ LR+WV HVDGFRFDLA+
Sbjct: 280 RGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFRFDLAA 339
Query: 451 VLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDCR-GLYLVGKFPNWDRWAEWNGK 509
V+ R T +AP L AI +LS+ K+IAEPWD G Y VG FP +AEWN
Sbjct: 340 VMGR-TPEFRQDAP-LFTAIQNCPVLSQVKLIAEPWDIAPGGYQVGNFP--PLFAEWNDH 395
Query: 510 YRDDLRKF-IKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYN 568
+RD R+F + D + G A R + SSD+++ N R P +IN + AHDGFTL D V +N
Sbjct: 396 FRDAARRFWLHYDLPL-GAFAGRFAASSDVFKRNGRLPSAAINLVTAHDGFTLRDCVCFN 454
Query: 569 YKHXXXXXXXXXXXXXXXFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLM 628
+KH +S N G EG + R + L++SQGTPM+L
Sbjct: 455 HKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTTLLLSQGTPMLLA 514
Query: 629 GDEYGHTRYGNNNSYGHDTAINNFQWGQ 656
GDE+GH+++GNNN+Y D + W Q
Sbjct: 515 GDEHGHSQHGNNNAYCQDNQLTWLDWSQ 542
>UNIPROTKB|Q9KKS1 [details] [associations]
symbol:VC_A1029 "Glycogen operon protein GlgX"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005977 "glycogen
metabolic process" evidence=ISS] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR011837 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02922 InterPro:IPR013780
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 CAZy:CBM48
GO:GO:0005977 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0005980 HSSP:P07762
KO:K02438 PANTHER:PTHR10357:SF74 TIGRFAMs:TIGR02100 GO:GO:0004133
OMA:TWDGLGT PIR:D82388 RefSeq:NP_233413.1 ProteinModelPortal:Q9KKS1
DNASU:2612208 GeneID:2612208 KEGG:vch:VCA1029 PATRIC:20086574
ProtClustDB:CLSK869885 Uniprot:Q9KKS1
Length = 656
Score = 747 (268.0 bits), Expect = 3.2e-77, Sum P(2) = 3.2e-77
Identities = 197/565 (34%), Positives = 278/565 (49%)
Query: 206 DPYAKLVEGRRHFGDASAKLSKF-LGTYEFESLPFDWGDNYKLPNIPEKDLVIYEMNVRA 264
DPYA+ +EG H+ F L FDW N P I ++V++E +V+
Sbjct: 84 DPYARALEGPLHYAPPFDSHKSFDLPKCVVTDTHFDW-QNVAKPRIARDEMVLFETHVKG 142
Query: 265 FTGDESSGLDPEIRGSYLGLIQK--IPHLLELGINAVELLPVFEFDEMEFQRRRNPRDHM 322
T + ++ +RG YLGL+ + + + IN ++LLP+
Sbjct: 143 LT-QLNPDVEKALRGKYLGLVSQPMLDFYRQQNINTLQLLPIAAC----MHEPHLLESGK 197
Query: 323 VNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADD 382
VN WGY+ F +P RYA+ A E K ++ LH GI+VILDVVYNHT E
Sbjct: 198 VNYWGYNPYVFMAPDPRYASKD-----AVNELKTTIRELHRNGIQVILDVVYNHTAEGGT 252
Query: 383 ANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVD 442
P + + +D YY+ G NY GCGNT++ ++ + L++D+LR WV EY +D
Sbjct: 253 NGP-VFNLKALDPN-YYLHHGD-HYANYTGCGNTVDLSNQAALNLVMDTLRCWVTEYQID 309
Query: 443 GFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDC--RGLYLVGKFPNW 500
GFRFDLA+ L R D A +A+A+D +L K+IAEPWD G Y VG FP
Sbjct: 310 GFRFDLAATLGRRGDEFSKEAA-FFKAVAQDPVLREVKLIAEPWDIGPNG-YQVGNFPFG 367
Query: 501 DRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYH-SINFIIAHDGF 559
W E N K RD R F +GD G ATR+ GS DLY PY ++N+I HDGF
Sbjct: 368 --WNETNDKLRDITRSFWRGDLGFLKEFATRLMGSRDLYSA-ANWPYKLTVNYITYHDGF 424
Query: 560 TLYDLVSYNYKHXXXXXXXXXXXXXXXFSWNCGFEGETDDASIKALRSRQMKNFHLALMV 619
TL DLVSY +KH S N GFEG+TD I+A R RQ +NF +L+
Sbjct: 425 TLQDLVSYKHKHNEANGEQNRDGHGDNRSDNYGFEGDTDSIVIRATRERQKRNFMASLLF 484
Query: 620 SQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSR- 678
+ G P +L D HT+ GNNN+Y D I+ W ETK++ + + ++ RQ+
Sbjct: 485 AFGIPHILTADVLSHTQKGNNNAYCQDNDISWLNWENNETKQDFR-EWLAGMVAARQTYM 543
Query: 679 ----RVFGREDFLNINDVTWHE--------DNWDNYDSKFLAFTLHDNNGADIYLAFNAH 726
R F E+ N N + W D+W+ S L + + +YL N
Sbjct: 544 VPFIRAFSGEN-RNNNRIAWRRVDGKPMEMDDWNRLSSVALHIGIGSDGPEMLYL-INQT 601
Query: 727 DFFVKVSLPPPPPKRQWFRVVDTNL 751
+ + LP ++ W + DTN+
Sbjct: 602 NAPARFVLPKDR-QQDWRLICDTNM 625
Score = 49 (22.3 bits), Expect = 3.2e-77, Sum P(2) = 3.2e-77
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 102 LKTSQGQAFPIGVSEVENGINFAIFSQHATAVTLCL 137
+K + FP+G + G NFAI++ + L L
Sbjct: 1 MKMNLSTPFPLGATLDAEGCNFAIYAPANRDILLAL 36
>TIGR_CMR|VC_A1029 [details] [associations]
symbol:VC_A1029 "glycogen operon protein GlgX" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005977 "glycogen metabolic process" evidence=ISS]
InterPro:IPR004193 InterPro:IPR006047 InterPro:IPR011837
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02922
InterPro:IPR013780 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
CAZy:GH13 Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553
CAZy:CBM48 GO:GO:0005977 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0005980 HSSP:P07762
KO:K02438 PANTHER:PTHR10357:SF74 TIGRFAMs:TIGR02100 GO:GO:0004133
OMA:TWDGLGT PIR:D82388 RefSeq:NP_233413.1 ProteinModelPortal:Q9KKS1
DNASU:2612208 GeneID:2612208 KEGG:vch:VCA1029 PATRIC:20086574
ProtClustDB:CLSK869885 Uniprot:Q9KKS1
Length = 656
Score = 747 (268.0 bits), Expect = 3.2e-77, Sum P(2) = 3.2e-77
Identities = 197/565 (34%), Positives = 278/565 (49%)
Query: 206 DPYAKLVEGRRHFGDASAKLSKF-LGTYEFESLPFDWGDNYKLPNIPEKDLVIYEMNVRA 264
DPYA+ +EG H+ F L FDW N P I ++V++E +V+
Sbjct: 84 DPYARALEGPLHYAPPFDSHKSFDLPKCVVTDTHFDW-QNVAKPRIARDEMVLFETHVKG 142
Query: 265 FTGDESSGLDPEIRGSYLGLIQK--IPHLLELGINAVELLPVFEFDEMEFQRRRNPRDHM 322
T + ++ +RG YLGL+ + + + IN ++LLP+
Sbjct: 143 LT-QLNPDVEKALRGKYLGLVSQPMLDFYRQQNINTLQLLPIAAC----MHEPHLLESGK 197
Query: 323 VNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADD 382
VN WGY+ F +P RYA+ A E K ++ LH GI+VILDVVYNHT E
Sbjct: 198 VNYWGYNPYVFMAPDPRYASKD-----AVNELKTTIRELHRNGIQVILDVVYNHTAEGGT 252
Query: 383 ANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVD 442
P + + +D YY+ G NY GCGNT++ ++ + L++D+LR WV EY +D
Sbjct: 253 NGP-VFNLKALDPN-YYLHHGD-HYANYTGCGNTVDLSNQAALNLVMDTLRCWVTEYQID 309
Query: 443 GFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDC--RGLYLVGKFPNW 500
GFRFDLA+ L R D A +A+A+D +L K+IAEPWD G Y VG FP
Sbjct: 310 GFRFDLAATLGRRGDEFSKEAA-FFKAVAQDPVLREVKLIAEPWDIGPNG-YQVGNFPFG 367
Query: 501 DRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYH-SINFIIAHDGF 559
W E N K RD R F +GD G ATR+ GS DLY PY ++N+I HDGF
Sbjct: 368 --WNETNDKLRDITRSFWRGDLGFLKEFATRLMGSRDLYSA-ANWPYKLTVNYITYHDGF 424
Query: 560 TLYDLVSYNYKHXXXXXXXXXXXXXXXFSWNCGFEGETDDASIKALRSRQMKNFHLALMV 619
TL DLVSY +KH S N GFEG+TD I+A R RQ +NF +L+
Sbjct: 425 TLQDLVSYKHKHNEANGEQNRDGHGDNRSDNYGFEGDTDSIVIRATRERQKRNFMASLLF 484
Query: 620 SQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSR- 678
+ G P +L D HT+ GNNN+Y D I+ W ETK++ + + ++ RQ+
Sbjct: 485 AFGIPHILTADVLSHTQKGNNNAYCQDNDISWLNWENNETKQDFR-EWLAGMVAARQTYM 543
Query: 679 ----RVFGREDFLNINDVTWHE--------DNWDNYDSKFLAFTLHDNNGADIYLAFNAH 726
R F E+ N N + W D+W+ S L + + +YL N
Sbjct: 544 VPFIRAFSGEN-RNNNRIAWRRVDGKPMEMDDWNRLSSVALHIGIGSDGPEMLYL-INQT 601
Query: 727 DFFVKVSLPPPPPKRQWFRVVDTNL 751
+ + LP ++ W + DTN+
Sbjct: 602 NAPARFVLPKDR-QQDWRLICDTNM 625
Score = 49 (22.3 bits), Expect = 3.2e-77, Sum P(2) = 3.2e-77
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 102 LKTSQGQAFPIGVSEVENGINFAIFSQHATAVTLCL 137
+K + FP+G + G NFAI++ + L L
Sbjct: 1 MKMNLSTPFPLGATLDAEGCNFAIYAPANRDILLAL 36
>TAIR|locus:2014500 [details] [associations]
symbol:DBE1 "debranching enzyme 1" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0004556 "alpha-amylase
activity" evidence=ISS] [GO:0005975 "carbohydrate metabolic
process" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0043169 "cation binding" evidence=IEA]
[GO:0019156 "isoamylase activity" evidence=IDA;IMP] [GO:0010021
"amylopectin biosynthetic process" evidence=IMP] [GO:0000023
"maltose metabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0019761 "glucosinolate
biosynthetic process" evidence=RCA] [GO:0043085 "positive
regulation of catalytic activity" evidence=RCA] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF00128 Pfam:PF02922 UniPathway:UPA00152 InterPro:IPR013780
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
Gene3D:2.60.40.1180 PANTHER:PTHR10357 CAZy:CBM48 InterPro:IPR014756
SUPFAM:SSF81296 EMBL:AC005278 GO:GO:0010021 GO:GO:0019252
eggNOG:COG1523 HOGENOM:HOG000239197 BRENDA:3.2.1.68 GO:GO:0019156
EMBL:AY139980 IPI:IPI00531675 PIR:F86164 RefSeq:NP_171830.1
RefSeq:NP_973751.1 UniGene:At.24041 ProteinModelPortal:Q8L735
SMR:Q8L735 STRING:Q8L735 PaxDb:Q8L735 PRIDE:Q8L735
EnsemblPlants:AT1G03310.1 EnsemblPlants:AT1G03310.2 GeneID:839531
KEGG:ath:AT1G03310 TAIR:At1g03310 InParanoid:Q9ZVT2 OMA:LNMGDEC
PhylomeDB:Q8L735 ProtClustDB:CLSN2679656 Genevestigator:Q8L735
Uniprot:Q8L735
Length = 882
Score = 625 (225.1 bits), Expect = 4.4e-61, P = 4.4e-61
Identities = 173/486 (35%), Positives = 246/486 (50%)
Query: 328 YSTINFFSPMSRYAAGGGGPLKASWE-FKEMVKALHGAGIEVILDVVYNHTNEADDANPY 386
Y +FFSPM Y G L+++ K MVK LH GIEV+L+VV+ HT AD
Sbjct: 423 YFPFHFFSPMDIY--GPSNSLESAVNSMKVMVKKLHSEGIEVLLEVVFTHT--ADSG--- 475
Query: 387 TTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRF 446
+ RGID+ YY G+ N + LNCN+PVV +L+L+SLR+WV E+HVDGF F
Sbjct: 476 --ALRGIDDSSYYY---KGRA-NDLDSKSYLNCNYPVVQQLVLESLRYWVTEFHVDGFCF 529
Query: 447 DLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDCRGLYLVGK---FPNWDRW 503
AS L RG G L+ PPL+ AIA D +L+ K+IA+ WD L ++ K FP+W RW
Sbjct: 530 INASSLLRGVHGEQLSRPPLVEAIAFDPLLAETKLIADCWD--PLEMMPKEVRFPHWKRW 587
Query: 504 AEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFIIAHDGFTLYD 563
AE N +Y ++R F++G G+ LATRI GS D++ + R P S N+I + G +L D
Sbjct: 588 AELNTRYCRNVRNFLRGR-GVLSDLATRICGSGDVF-TDGRGPAFSFNYISRNSGLSLVD 645
Query: 564 LVSYNYKHXXXXXXXXXXXXXXXFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQGT 623
+VS++ SWNCG EG T+ +++ R +Q++NF +S G
Sbjct: 646 IVSFSGPELASE-----------LSWNCGEEGATNKSAVLQRRLKQIRNFLFIQYISLGV 694
Query: 624 PMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHY-RFFSEVIKFRQSRR-VF 681
P++ MGDE G + G+ F W L + + +F S + R R VF
Sbjct: 695 PVLNMGDECGISTRGSPLLESRKP----FDWNLLASAFGTQITQFISFMTSVRARRSDVF 750
Query: 682 GREDFLNINDVTWHEDN-----WDNYDSKFLAFTL---------------HDNNGADIYL 721
R DFL ++ W+ ++ W++ SKFLA + ++ D+++
Sbjct: 751 QRRDFLKPENIVWYANDQTTPKWEDPASKFLALEIKSESEEEETASLAEPNEPKSNDLFI 810
Query: 722 AFNAHDFFVKVSLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGS-------TYNLSPY 774
FNA D V LP P +W R+VDT L P EG Y + PY
Sbjct: 811 GFNASDHPESVVLPSLPDGSKWRRLVDTALPFPGFFSVEGETVVAEEPLQQLVVYEMKPY 870
Query: 775 SSILLE 780
S L E
Sbjct: 871 SCTLFE 876
Score = 380 (138.8 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 106/315 (33%), Positives = 165/315 (52%)
Query: 94 RVSETTLPLKTSQGQAFPIGVSEV--ENGINFAIFSQHATAVTLCLSLPKREKLDWQDGG 151
R ++ +P+ + G P+G+S ++ NF+ FS+ +T V LCL D
Sbjct: 217 RDTDFCIPVGFTAGHPLPLGLSSGPDDDSWNFSFFSRSSTNVVLCLYDDSTT-----DKP 271
Query: 152 MIELPLDPRVNKTGDIWHICIEDLPRSEVLYGYRVDGPRDWHQGHRFDSSIVLIDPYAKL 211
+EL LDP VN+TGD+WH +++ V YGYR + + +++DPYA +
Sbjct: 272 ALELDLDPYVNRTGDVWHASVDNT-WDFVRYGYRCKETAHSKEDVDVEGEPIVLDPYATV 330
Query: 212 VEGRRHFGDASAKLSKFLGTYEFESLPFDWGDNYKLPNIPEKDLVIYEMNVRAFTGDESS 271
V G + ++ K+LG+ +S FDWG++ PNIP + L++Y +NV+ FT SS
Sbjct: 331 V------GKSVSQ--KYLGSLS-KSPSFDWGEDVS-PNIPLEKLLVYRLNVKGFTQHRSS 380
Query: 272 GLDPEIRGSYLGLIQKIPHLLELGINAVELLPVFEFDEMEFQRRRNPRDHMVNTWGYSTI 331
L + G++ G+ +K+ HL LG NAV L P+F F E ++ P Y
Sbjct: 381 KLPSNVAGTFSGVAEKVSHLKTLGTNAVLLEPIFSFSE-----QKGP---------YFPF 426
Query: 332 NFFSPMSRYAAGGGGPLKASWE-FKEMVKALHGAGIEVILDVVYNHTNEA------DDAN 384
+FFSPM Y G L+++ K MVK LH GIEV+L+VV+ HT ++ DD++
Sbjct: 427 HFFSPMDIY--GPSNSLESAVNSMKVMVKKLHSEGIEVLLEVVFTHTADSGALRGIDDSS 484
Query: 385 PYTTS-FRGIDNKVY 398
Y +D+K Y
Sbjct: 485 YYYKGRANDLDSKSY 499
>TIGR_CMR|BA_2728 [details] [associations]
symbol:BA_2728 "pullulanase, putative" species:198094
"Bacillus anthracis str. Ames" [GO:0004556 "alpha-amylase activity"
evidence=ISS] [GO:0005975 "carbohydrate metabolic process"
evidence=ISS] InterPro:IPR004193 InterPro:IPR005323
InterPro:IPR006047 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF00128 Pfam:PF02922 Pfam:PF03714 InterPro:IPR013780
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 GO:GO:0005975
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0030246
CAZy:CBM48 CAZy:CBM41 HOGENOM:HOG000059883 KO:K01200
InterPro:IPR011840 TIGRFAMs:TIGR02104 RefSeq:NP_845079.1
RefSeq:YP_019369.1 RefSeq:YP_028802.1 ProteinModelPortal:Q81PS2
DNASU:1087991 EnsemblBacteria:EBBACT00000012098
EnsemblBacteria:EBBACT00000015197 EnsemblBacteria:EBBACT00000019412
GeneID:1087991 GeneID:2817025 GeneID:2849078 KEGG:ban:BA_2728
KEGG:bar:GBAA_2728 KEGG:bat:BAS2542 OMA:MHKLSSS
ProtClustDB:CLSK875993 BioCyc:BANT260799:GJAJ-2607-MONOMER
BioCyc:BANT261594:GJ7F-2700-MONOMER Uniprot:Q81PS2
Length = 852
Score = 321 (118.1 bits), Expect = 2.2e-32, Sum P(2) = 2.2e-32
Identities = 110/390 (28%), Positives = 173/390 (44%)
Query: 205 IDPYAKLVEGRRHFGDASAKLSKFLGTYEFESLPFDWGDNYKLPNI--PEKDLVIYEMNV 262
+DPYA+ GD A + E E+ P W N K P + PE D +IYE++V
Sbjct: 312 VDPYARAASVN---GDKGAVVD-----LE-ETNPKKWNTNKK-PKLKNPE-DAIIYELHV 360
Query: 263 RAFTGDESSGLDPEIRGSYLGLIQK-----------IPHLLELGINAVELLPVFEFDEME 311
R + SG+ +G YLG+ +K + H+ +LG+ V+LLP+F++ +
Sbjct: 361 RDLSIQPESGIKQ--KGKYLGVTEKGTKGPEGVKTGLDHMKDLGVTHVQLLPIFDYASVN 418
Query: 312 FQRRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILD 371
++ P+ + WGY NF P Y+ P E K+M++ LH + V++D
Sbjct: 419 EEKVNEPQYN----WGYDPKNFNVPEGSYSTNPYEPTVRITELKQMIQTLHDNNLRVVMD 474
Query: 372 VVYNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDS 431
VVYNH A ++N F + YY + G N G GN ++ + ++DS
Sbjct: 475 VVYNHMYNAAESN-----FHKLVPGYYYRYNEDGTFANGTGVGNDTASERTMMRKFMIDS 529
Query: 432 LRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDCR-- 489
+ +W EY++DGFRFDL + D +N IR A + I + E WD
Sbjct: 530 VTYWAKEYNLDGFRFDLMGI----HDYETMNE---IRK-AVNQIDPSIILHGEGWDLNTP 581
Query: 490 -GLYLVGKFPNWDRW---AEWNGKYRDDLRK---------FIKGDPGMKGILATRISGSS 536
L N ++ A +N RD L+ F+ G M+ + I+
Sbjct: 582 LAAELKANQKNAEKMKGIAHFNDNIRDGLKGSVFEEKENGFVNGKENMEDRIKKGITAGI 641
Query: 537 DLYRVNK---RKPYHSINFIIAHDGFTLYD 563
D Y N + P + ++ AHD TL+D
Sbjct: 642 D-YDTNSSTYQDPEQVLTYVEAHDNHTLWD 670
Score = 117 (46.2 bits), Expect = 2.2e-32, Sum P(2) = 2.2e-32
Identities = 38/152 (25%), Positives = 66/152 (43%)
Query: 597 TDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQ 656
T+ + +R + K L+ SQG P + G E+ T+YG++NSY +IN W +
Sbjct: 675 TNPGDSEEVRKQIHKLSSSILLTSQGIPFLHAGQEFMRTKYGDHNSYKSPDSINQMDWLR 734
Query: 657 LETKKNSHYRFFSEVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDNNG 716
T N+ + +I+ R+ F + + H D + +T+ N
Sbjct: 735 RATF-NNEVDYMKGLIELRKKYPAFR---MTSAEQIKTHVSFIDA-PKNTVTYTIEGNKH 789
Query: 717 ADIYLAFNAHDFFVKVSLPPPPPKRQWFRVVD 748
+A NA+ V+++LP P W +VD
Sbjct: 790 EYFTVAHNANREAVEITLPSKGP---WKVLVD 818
>UNIPROTKB|Q81KP1 [details] [associations]
symbol:BAS4597 "Putative pullulanase" species:1392
"Bacillus anthracis" [GO:0004556 "alpha-amylase activity"
evidence=ISS] [GO:0005975 "carbohydrate metabolic process"
evidence=ISS] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02922
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 GO:GO:0005975
PANTHER:PTHR10357 CAZy:CBM48 InterPro:IPR014756 SUPFAM:SSF81296
GO:GO:0004556 RefSeq:NP_847150.1 RefSeq:YP_021599.1
RefSeq:YP_030843.1 ProteinModelPortal:Q81KP1 IntAct:Q81KP1
DNASU:1085682 EnsemblBacteria:EBBACT00000009751
EnsemblBacteria:EBBACT00000017737 EnsemblBacteria:EBBACT00000021503
GeneID:1085682 GeneID:2818501 GeneID:2850415 KEGG:ban:BA_4953
KEGG:bar:GBAA_4953 KEGG:bat:BAS4597 HOGENOM:HOG000059883 KO:K01200
OMA:YNRIVEC ProtClustDB:CLSK873560
BioCyc:BANT260799:GJAJ-4653-MONOMER
BioCyc:BANT261594:GJ7F-4811-MONOMER InterPro:IPR011840
TIGRFAMs:TIGR02104 Uniprot:Q81KP1
Length = 713
Score = 319 (117.4 bits), Expect = 7.9e-31, Sum P(2) = 7.9e-31
Identities = 114/390 (29%), Positives = 181/390 (46%)
Query: 205 IDPYAKLVEGRRHFGDASAKLSKFLGTYEFESLPFDWGDNYKLPNIPEKDLVIYEMNVRA 264
+DPYAK V +G L K T + E LP P D ++YE+++R
Sbjct: 177 VDPYAKSVTVNGKYG-VVIDLEKTNVTKQ-EQLP---------PLQAMTDAILYELHIRD 225
Query: 265 FTGDESSGLDPEIRGSYLGLIQK-----------IPHLLELGINAVELLPVFEFDEMEFQ 313
T E SG+ +G+Y GL+++ + H+ +LG+ VELLP++ F ++
Sbjct: 226 ATIHEGSGVSK--KGTYKGLMEEGTTGRNGTLTGLSHIKDLGVTHVELLPLYCFGGVD-- 281
Query: 314 RRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVV 373
NP WGY+ + + +P YA P E K++++ H GI VI+DVV
Sbjct: 282 -EANPSS--AYNWGYNPLYYNAPTGFYATNPSDPYNRILECKQLIETFHEHGIRVIIDVV 338
Query: 374 YNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLR 433
YNH E + +SF + Y+ G N G GN + ++ + I++S+
Sbjct: 339 YNHVYERE-----LSSFEKLVPGYYFRHGENGMPSNGTGVGNDIASERKMMRKFIVESIL 393
Query: 434 HWVVEYHVDGFRFDLASVLCRGTDGSPLNA-PPLIRAIAKDAILSRCKIIAEPWDCRG-L 491
+W+ EY+VDGFRFDL +L D +N +R I +DA+L + E WD + L
Sbjct: 394 YWLTEYNVDGFRFDLMGIL----DVDTINIIEKEVRNIKRDALL-----LGEGWDLQTPL 444
Query: 492 YLVGK--FPNWDRW---AEWNGKYRDDL---------RKFIKGDPGMKGILATRISGSSD 537
L K N ++ A++N ++RD + R F G + L SGS
Sbjct: 445 PLEEKATLNNANKMPHIAQFNDQFRDGIKGSTFHINKRGFAFGGHVDRNHLRYIASGS-- 502
Query: 538 LYRVNKR----KPYHSINFIIAHDGFTLYD 563
L + + +P SIN++ HD T++D
Sbjct: 503 LLSMKETGLFLEPVQSINYVECHDNMTMWD 532
Score = 101 (40.6 bits), Expect = 7.9e-31, Sum P(2) = 7.9e-31
Identities = 47/187 (25%), Positives = 82/187 (43%)
Query: 597 TDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQ 656
+++ S + L+ R + + ++ SQG P + G E+ T+ GN NSY + IN W +
Sbjct: 537 SNEESEEILKKRHVLATAMVIL-SQGIPFLHAGQEFYRTKQGNENSYNANDEINQLDWDR 595
Query: 657 LETKKNSHYRFFSEVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTL-H-DN 714
E K+ + +I R+ F + N + + H + + LA+ L H ++
Sbjct: 596 KE-KEIETVNYIKGLIAIRKEHGAFRLQ---NADLIKKHM-TFLQTSPEVLAYHLEHVES 650
Query: 715 NGA--DIYLAFNAHDFFVKVSLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLS 772
G +I + FN+ V LP + W +V+ E I P + G LS
Sbjct: 651 FGPWKEIVVLFNSSLEAKTVQLPK---EETWHVLVN---EKQAKIEPISSF-RGKELRLS 703
Query: 773 PYSSILL 779
P S+ +L
Sbjct: 704 PISTYIL 710
>TIGR_CMR|BA_4953 [details] [associations]
symbol:BA_4953 "pullulanase, putative" species:198094
"Bacillus anthracis str. Ames" [GO:0004556 "alpha-amylase activity"
evidence=ISS] [GO:0005975 "carbohydrate metabolic process"
evidence=ISS] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02922
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 GO:GO:0005975
PANTHER:PTHR10357 CAZy:CBM48 InterPro:IPR014756 SUPFAM:SSF81296
GO:GO:0004556 RefSeq:NP_847150.1 RefSeq:YP_021599.1
RefSeq:YP_030843.1 ProteinModelPortal:Q81KP1 IntAct:Q81KP1
DNASU:1085682 EnsemblBacteria:EBBACT00000009751
EnsemblBacteria:EBBACT00000017737 EnsemblBacteria:EBBACT00000021503
GeneID:1085682 GeneID:2818501 GeneID:2850415 KEGG:ban:BA_4953
KEGG:bar:GBAA_4953 KEGG:bat:BAS4597 HOGENOM:HOG000059883 KO:K01200
OMA:YNRIVEC ProtClustDB:CLSK873560
BioCyc:BANT260799:GJAJ-4653-MONOMER
BioCyc:BANT261594:GJ7F-4811-MONOMER InterPro:IPR011840
TIGRFAMs:TIGR02104 Uniprot:Q81KP1
Length = 713
Score = 319 (117.4 bits), Expect = 7.9e-31, Sum P(2) = 7.9e-31
Identities = 114/390 (29%), Positives = 181/390 (46%)
Query: 205 IDPYAKLVEGRRHFGDASAKLSKFLGTYEFESLPFDWGDNYKLPNIPEKDLVIYEMNVRA 264
+DPYAK V +G L K T + E LP P D ++YE+++R
Sbjct: 177 VDPYAKSVTVNGKYG-VVIDLEKTNVTKQ-EQLP---------PLQAMTDAILYELHIRD 225
Query: 265 FTGDESSGLDPEIRGSYLGLIQK-----------IPHLLELGINAVELLPVFEFDEMEFQ 313
T E SG+ +G+Y GL+++ + H+ +LG+ VELLP++ F ++
Sbjct: 226 ATIHEGSGVSK--KGTYKGLMEEGTTGRNGTLTGLSHIKDLGVTHVELLPLYCFGGVD-- 281
Query: 314 RRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVV 373
NP WGY+ + + +P YA P E K++++ H GI VI+DVV
Sbjct: 282 -EANPSS--AYNWGYNPLYYNAPTGFYATNPSDPYNRILECKQLIETFHEHGIRVIIDVV 338
Query: 374 YNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLR 433
YNH E + +SF + Y+ G N G GN + ++ + I++S+
Sbjct: 339 YNHVYERE-----LSSFEKLVPGYYFRHGENGMPSNGTGVGNDIASERKMMRKFIVESIL 393
Query: 434 HWVVEYHVDGFRFDLASVLCRGTDGSPLNA-PPLIRAIAKDAILSRCKIIAEPWDCRG-L 491
+W+ EY+VDGFRFDL +L D +N +R I +DA+L + E WD + L
Sbjct: 394 YWLTEYNVDGFRFDLMGIL----DVDTINIIEKEVRNIKRDALL-----LGEGWDLQTPL 444
Query: 492 YLVGK--FPNWDRW---AEWNGKYRDDL---------RKFIKGDPGMKGILATRISGSSD 537
L K N ++ A++N ++RD + R F G + L SGS
Sbjct: 445 PLEEKATLNNANKMPHIAQFNDQFRDGIKGSTFHINKRGFAFGGHVDRNHLRYIASGS-- 502
Query: 538 LYRVNKR----KPYHSINFIIAHDGFTLYD 563
L + + +P SIN++ HD T++D
Sbjct: 503 LLSMKETGLFLEPVQSINYVECHDNMTMWD 532
Score = 101 (40.6 bits), Expect = 7.9e-31, Sum P(2) = 7.9e-31
Identities = 47/187 (25%), Positives = 82/187 (43%)
Query: 597 TDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQ 656
+++ S + L+ R + + ++ SQG P + G E+ T+ GN NSY + IN W +
Sbjct: 537 SNEESEEILKKRHVLATAMVIL-SQGIPFLHAGQEFYRTKQGNENSYNANDEINQLDWDR 595
Query: 657 LETKKNSHYRFFSEVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTL-H-DN 714
E K+ + +I R+ F + N + + H + + LA+ L H ++
Sbjct: 596 KE-KEIETVNYIKGLIAIRKEHGAFRLQ---NADLIKKHM-TFLQTSPEVLAYHLEHVES 650
Query: 715 NGA--DIYLAFNAHDFFVKVSLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLS 772
G +I + FN+ V LP + W +V+ E I P + G LS
Sbjct: 651 FGPWKEIVVLFNSSLEAKTVQLPK---EETWHVLVN---EKQAKIEPISSF-RGKELRLS 703
Query: 773 PYSSILL 779
P S+ +L
Sbjct: 704 PISTYIL 710
>TAIR|locus:2179919 [details] [associations]
symbol:LDA "limit dextrinase" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0004556 "alpha-amylase activity" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0043169
"cation binding" evidence=IEA] [GO:0051060 "pullulanase activity"
evidence=IEA;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0010303 "limit dextrinase activity" evidence=IDA] [GO:0005983
"starch catabolic process" evidence=IMP;TAS] [GO:0019252 "starch
biosynthetic process" evidence=RCA;IMP] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0000272 "polysaccharide catabolic process"
evidence=RCA] [GO:0005982 "starch metabolic process" evidence=RCA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0015996
"chlorophyll catabolic process" evidence=RCA] [GO:0016556 "mRNA
modification" evidence=RCA] [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=RCA]
[GO:0019760 "glucosinolate metabolic process" evidence=RCA]
[GO:0019761 "glucosinolate biosynthetic process" evidence=RCA]
InterPro:IPR004193 InterPro:IPR006047 InterPro:IPR011839
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02922
UniPathway:UPA00152 UniPathway:UPA00153 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009570 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 PANTHER:PTHR10357
CAZy:CBM48 GO:GO:0005983 InterPro:IPR014756 SUPFAM:SSF81296
GO:GO:0019252 eggNOG:COG1523 EMBL:BT002411 IPI:IPI00530984
RefSeq:NP_196056.2 UniGene:At.26109 ProteinModelPortal:Q8GTR4
SMR:Q8GTR4 STRING:Q8GTR4 PaxDb:Q8GTR4 PRIDE:Q8GTR4
EnsemblPlants:AT5G04360.1 GeneID:830315 KEGG:ath:AT5G04360
TAIR:At5g04360 HOGENOM:HOG000251916 InParanoid:Q8GTR4 OMA:ERCRINH
Genevestigator:Q8GTR4 GO:GO:0010303 GO:GO:0051060
InterPro:IPR024561 Pfam:PF11852 TIGRFAMs:TIGR02103 Uniprot:Q8GTR4
Length = 965
Score = 215 (80.7 bits), Expect = 1.2e-23, Sum P(5) = 1.2e-23
Identities = 55/165 (33%), Positives = 86/165 (52%)
Query: 326 WGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANP 385
WGY+ + + P YA+ GP + EF++MV+AL+ G+ V+LDVVYNH + + +
Sbjct: 434 WGYNPVLWGVPKGSYASDPTGPCRII-EFRKMVQALNCTGLNVVLDVVYNHLHASGPHDK 492
Query: 386 YTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFR 445
+ + + YY+ + + + C N H +V LI D L +WVV Y VDGFR
Sbjct: 493 ESVLDKIVPG--YYLRRNSDGFIENSTCVNNTASEHYMVDRLIRDDLLNWVVNYKVDGFR 550
Query: 446 FDLASVLCRGTDGSPLNAPPLIRAIAK--DAIL-SRCKIIAEPWD 487
FDL + + T +NA I ++ K D + SR + E W+
Sbjct: 551 FDLMGHIMKATI---VNAKSAIGSLRKETDGVDGSRIYLYGEGWN 592
Score = 109 (43.4 bits), Expect = 1.2e-23, Sum P(5) = 1.2e-23
Identities = 55/216 (25%), Positives = 95/216 (43%)
Query: 111 PIGVSEVENGINFAIFSQHATAVTLCLSLPKREKLDWQDGGMIELPLDPRVNKTGDIWHI 170
P+G G++ +++ A AV++C+ + LD M PL + +W
Sbjct: 207 PLGAHFTPEGVSLHLWAPTAQAVSVCIY---KNPLD--KSPMEICPL----KEANGVWST 257
Query: 171 CIEDLPR-SEVLYGYRVDGPRDWHQGHRFDSSIVLIDPYAKLVEGRRHFGDASAKLSKFL 229
E Y Y+V +H + DPYA+ G ++ FL
Sbjct: 258 --EGACSWGGCYYVYKVSV---YHPSTMKLETCYANDPYAR--------GLSADGRKTFL 304
Query: 230 GTYEFESL-PFDWGDNY--KLPNIPE-KDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLI 285
+ + L P W DN K P + D+ IYE++VR F+ ++ + ++PE RG YL
Sbjct: 305 VNLDSDDLKPEGW-DNLADKKPCLRSFSDISIYELHVRDFSANDET-VEPENRGGYLAFT 362
Query: 286 QK----IPHLLEL---GINAVELLPVFEFDEMEFQR 314
K + HL +L G+ + LLP F+F +++ ++
Sbjct: 363 SKDSAGVKHLQKLVDAGLTHLHLLPTFQFGDVDDEK 398
Score = 62 (26.9 bits), Expect = 1.2e-23, Sum P(5) = 1.2e-23
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 546 PYHSINFIIAHDGFTLYDLVS 566
P +IN++ AHD TL+D++S
Sbjct: 710 PTETINYVSAHDNETLFDIIS 730
Score = 56 (24.8 bits), Expect = 1.2e-23, Sum P(5) = 1.2e-23
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 12 QPLPALSNSTKLLLFAPTFSHKLCRSFSAASPAHEMGLRLSKKAS 56
+P+ ++SN +L L + T H LC S SA+SP M L +S S
Sbjct: 39 RPVTSISNF-RLRLPSKTSLHCLCSSSSASSP---MSLEVSSPNS 79
Score = 48 (22.0 bits), Expect = 1.2e-23, Sum P(5) = 1.2e-23
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 614 HLA---LMVSQGTPMMLMGDEYGHTRYGNNNSYGH-------DTAINNFQWGQ-LETK-K 661
HLA + +SQG P GDE ++ + +SY D + ++ WG L K K
Sbjct: 747 HLASSMIALSQGIPFFHAGDEILRSKSLDRDSYNSGDWFNRLDFSYSSNNWGVGLPPKGK 806
Query: 662 NSH 664
N H
Sbjct: 807 NEH 809
>TIGR_CMR|CPS_0996 [details] [associations]
symbol:CPS_0996 "alpha amylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004556
"alpha-amylase activity" evidence=ISS] [GO:0016052 "carbohydrate
catabolic process" evidence=ISS] InterPro:IPR004193
InterPro:IPR011839 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF02922 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
GO:GO:0005975 PANTHER:PTHR10357 CAZy:CBM48 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014756 SUPFAM:SSF81296
eggNOG:COG1523 HOGENOM:HOG000251916 GO:GO:0051060
InterPro:IPR024561 Pfam:PF11852 TIGRFAMs:TIGR02103
RefSeq:YP_267745.1 ProteinModelPortal:Q487M0 STRING:Q487M0
GeneID:3521917 KEGG:cps:CPS_0996 PATRIC:21465271 OMA:ANDAWEI
BioCyc:CPSY167879:GI48-1082-MONOMER Uniprot:Q487M0
Length = 998
Score = 198 (74.8 bits), Expect = 7.7e-20, Sum P(4) = 7.7e-20
Identities = 46/124 (37%), Positives = 67/124 (54%)
Query: 326 WGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANP 385
WGY ++ P YA G + EF+EMV++LH G VI+DVVYNHT++A P
Sbjct: 461 WGYDPFHYTVPEGSYAVDAKGVSRLV-EFREMVQSLHAMGFRVIMDVVYNHTHQAG-LEP 518
Query: 386 YTTSFRGIDNKVYYMVDG-TGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGF 444
+ + + Y+ +D TG + C NT ++ +L+ DSL W +Y +DGF
Sbjct: 519 NSVLDKIVPT-YYHRLDPLTGDIEQSTCCDNTAT-ERVMMAKLMTDSLVVWARDYKIDGF 576
Query: 445 RFDL 448
RFDL
Sbjct: 577 RFDL 580
Score = 123 (48.4 bits), Expect = 7.7e-20, Sum P(4) = 7.7e-20
Identities = 54/205 (26%), Positives = 94/205 (45%)
Query: 112 IGVSEVENGINFAI-FSQHA-TAVTLCLSLPKREKLDWQDGGMIELPLDPRVNKTGDIWH 169
I EVE G++ A+ F A TA + + L + L G +E+ D + TG +W
Sbjct: 205 ISNQEVE-GVSTAVSFKLWAPTAQAVSIQLFD-DNLQALSDGKLEMVED---SSTG-VWQ 258
Query: 170 ICIEDLPRSEVLYGYRVDGPRDWHQGHRFDSSIVLIDPYAKLVEGRRHFGDASAKLSKFL 229
+ + D S Y Y+V+ +H + S+ + DPY+ + +++ S+ +
Sbjct: 259 V-LSDSQASYAYYKYQVNV---YHPASKKIESLSVTDPYSLSLS-------VNSEYSQVV 307
Query: 230 GTYEFESLPFDWGDNYKLPNIPE-KDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQK- 287
+ + P DW ++P + +D V YE ++R F+ +E D +G Y +K
Sbjct: 308 DLNDAVTQPKDWLTQ-QIPTVKNVEDNVFYETHIRDFSANEQQLSDSGFKGKYKAFSEKN 366
Query: 288 ---IPHLLEL---GINAVELLPVFE 306
I HL L G+N + LLP F+
Sbjct: 367 SDGIQHLKALQIAGLNNIHLLPTFD 391
Score = 48 (22.0 bits), Expect = 7.7e-20, Sum P(4) = 7.7e-20
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 546 PYHSINFIIAHDGFTLYDLVSY 567
P +IN++ HD TL+D Y
Sbjct: 734 PADTINYVSKHDNQTLWDNSQY 755
Score = 46 (21.3 bits), Expect = 7.7e-20, Sum P(4) = 7.7e-20
Identities = 14/64 (21%), Positives = 28/64 (43%)
Query: 599 DASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLE 658
D S + +++ AL +QG P + MG E+ ++ +SY + N + + +
Sbjct: 760 DVSTEDRVRMHLQSLSFALF-AQGIPFIHMGSEFMRSKSFLRDSYDYGDWFNRVDFSKQD 818
Query: 659 TKKN 662
N
Sbjct: 819 NFYN 822
Score = 38 (18.4 bits), Expect = 5.0e-19, Sum P(4) = 5.0e-19
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 723 FNAHDFFVKVSLPPPPP-KRQW 743
F+ D F V LPP K W
Sbjct: 814 FSKQDNFYNVGLPPAEKDKDNW 835
>TIGR_CMR|CPS_1694 [details] [associations]
symbol:CPS_1694 "putative pullulanase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004135
"amylo-alpha-1,6-glucosidase activity" evidence=ISS] [GO:0005976
"polysaccharide metabolic process" evidence=ISS] InterPro:IPR004193
InterPro:IPR005323 InterPro:IPR006047 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02922 Pfam:PF03714
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
GO:GO:0005975 PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0030246
CAZy:CBM48 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014756 SUPFAM:SSF81296 eggNOG:COG1523
HOGENOM:HOG000251916 InterPro:IPR024561 Pfam:PF11852
RefSeq:YP_268432.1 ProteinModelPortal:Q484T3 STRING:Q484T3
CAZy:CBM41 GeneID:3520234 KEGG:cps:CPS_1694 PATRIC:21466561
OMA:FSAQDES ProtClustDB:CLSK938185
BioCyc:CPSY167879:GI48-1771-MONOMER Uniprot:Q484T3
Length = 1429
Score = 211 (79.3 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 104/352 (29%), Positives = 148/352 (42%)
Query: 189 PRDWHQGHRFDSSIVLIDPY--AKLVEGR-RHFG--DASAKLS---KFLGTYEFESLPFD 240
P W GH ++ I+ Y A + EG R F D S + KFL E S P
Sbjct: 452 PEGW-DGH----AVSTIENYEDAVIYEGHIRDFSAQDESTSVENRGKFLAFTEINSAPMQ 506
Query: 241 WGDNYKLPNIPEKDLVIYEM---NVRAFTGDESSGLDPEIRGSYLGLIQ---KIPHLLEL 294
L + L + M N A T DE + ++ + L L + K P +
Sbjct: 507 -----HLQKLVANGLTHFHMLPANDIA-TIDEDADKIIDLDSTVLALCKVNFKAPPCYQ- 559
Query: 295 GINAVELLPVFE----FDEMEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKA 350
++ L VFE + + RD WGY +F P YA+ G +
Sbjct: 560 NLDDQTLRAVFESYSPYSNEAVKLTEAMRDTDSFNWGYDPKHFNVPDGIYASNPDGVSRI 619
Query: 351 SWEFKEMVKALHGAGIEVILDVVYNHTNEAD--DANPYTTSFRGIDNKVYYMVD-GTGQL 407
E + M+K+LH G+ V+LDVVYNHTN A D N F + Y+ D TG +
Sbjct: 620 K-EMRAMIKSLHDIGLRVVLDVVYNHTNSAGLWD-NSVLDKF--VPG-YYHSRDVTTGAV 674
Query: 408 LNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLI 467
N C +T H ++ +L++DSL+ W +Y DGFRFD+ S +G+ L A I
Sbjct: 675 QNSTCCSDTA-LEHRMMDKLMVDSLKQWTEQYQFDGFRFDIMS---QGSKEQMLAARDAI 730
Query: 468 RAIAKDAILSRCKIIAEPW--DCRGLYLVGKFPNW--DRWAEWNGKYRDDLR 515
+AI D E W D RG + N A +N + RD +R
Sbjct: 731 QAIDPDN-----HFYGEGWYKDSRGFERADQ-ENMAGTEIATYNDRIRDGIR 776
Score = 57 (25.1 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 511 RDDLRKF-IKG---DPGMKGILATRISGSS-DLYRVNKRKPYHSINFIIAHDGFTLYDLV 565
+ D+ KF + G D +K T + GSS +Y + P IN++ HD TL+D++
Sbjct: 793 QQDIVKFGMAGTQTDYVLKTFKGTDVVGSSAGMYA---KDPADIINYVSKHDNETLWDIL 849
Query: 566 SY 567
+
Sbjct: 850 QF 851
Score = 48 (22.0 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 617 LMVSQGTPMMLMGDEYGHTRYGNNNSY 643
+++SQG P + MG ++ ++ + N+Y
Sbjct: 873 VLLSQGIPFLQMGGDFLRSKSLDRNTY 899
Score = 42 (19.8 bits), Expect = 6.0e-13, Sum P(3) = 6.0e-13
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 678 RRVFGREDFLNINDVTWHEDNWD 700
R + D+ N+ D T+ +NW+
Sbjct: 896 RNTYDAGDWYNLVDFTFELNNWN 918
Score = 38 (18.4 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 756 DIVPEGAAGTGSTYNLSPY 774
DIV G AGT + Y L +
Sbjct: 795 DIVKFGMAGTQTDYVLKTF 813
>UNIPROTKB|G4NAD9 [details] [associations]
symbol:MGG_03186 "1,4-alpha-glucan-branching enzyme"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 InterPro:IPR013780 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0005978
InterPro:IPR014756 SUPFAM:SSF81296 EMBL:CM001234 GO:GO:0003844
KO:K00700 RefSeq:XP_003716803.1 ProteinModelPortal:G4NAD9
EnsemblFungi:MGG_03186T0 GeneID:2676993 KEGG:mgr:MGG_03186
Uniprot:G4NAD9
Length = 691
Score = 176 (67.0 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 48/131 (36%), Positives = 69/131 (52%)
Query: 325 TWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHT--NEADD 382
++GY NFF+ SRY G P + KE++ A HG G+ V+LDVV++H N D
Sbjct: 241 SFGYQINNFFAASSRY----GTPE----DLKELIDAAHGMGLTVLLDVVHSHASKNVLDG 292
Query: 383 ANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVD 442
N F G D++ Y+ G G+ + N H V+ +L +LR W+ EY D
Sbjct: 293 IN----EFDGTDHQ-YFHAGGKGRHDQWDS--RLFNYGHHEVLRFLLSNLRFWMDEYQFD 345
Query: 443 GFRFD-LASVL 452
GFRFD + S+L
Sbjct: 346 GFRFDGVTSML 356
Score = 53 (23.7 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 26/95 (27%), Positives = 42/95 (44%)
Query: 248 PNIPEKDLVIYEMNVRAFTGDESSGLDPEIR-GSYLGLIQK-IPHLLELGINAVELLPVF 305
P P K + +YE +V G S PE+R +Y + +P + +LG N ++L+ +
Sbjct: 184 PKKP-KSVRVYEAHV----GISS----PELRVATYKEFTKNMLPRIKKLGYNVIQLMAIM 234
Query: 306 EFDEMEFQRRRNPRDHMVNTWGYSTINFFSPMSRY 340
E ++GY NFF+ SRY
Sbjct: 235 EHAYYA-------------SFGYQINNFFAASSRY 256
>TAIR|locus:2092349 [details] [associations]
symbol:EMB2729 "EMBRYO DEFECTIVE 2729" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004556 "alpha-amylase activity" evidence=ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS;IMP]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=NAS] [GO:0043169
"cation binding" evidence=IEA] [GO:0009536 "plastid" evidence=IDA]
[GO:0009791 "post-embryonic development" evidence=IMP]
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 UniPathway:UPA00152
InterPro:IPR013780 GO:GO:0009507 GO:GO:0009570 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
CAZy:GH13 GO:GO:0005975 Gene3D:2.60.40.1180 PANTHER:PTHR10357
CAZy:CBM48 GO:GO:0009791 GO:GO:0003844 EMBL:AB024036 GO:GO:0009501
eggNOG:COG0296 HOGENOM:HOG000175159 GO:GO:0019252 EMBL:GQ374452
EMBL:AK118785 IPI:IPI00545170 IPI:IPI00657194 IPI:IPI00991739
RefSeq:NP_001154629.1 RefSeq:NP_001189940.1 RefSeq:NP_188679.2
UniGene:At.38239 ProteinModelPortal:D2WL32 SMR:D2WL32 PRIDE:D2WL32
EnsemblPlants:AT3G20440.2 GeneID:821589 KEGG:ath:AT3G20440
TAIR:At3g20440 InParanoid:Q8GWK4 OMA:RSISKRI ProtClustDB:PLN03244
Uniprot:D2WL32
Length = 899
Score = 131 (51.2 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
Identities = 41/129 (31%), Positives = 60/129 (46%)
Query: 325 TWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDAN 384
T GY NFF+ SRY G P +FK +V HG G+ V LD+V H+ A D
Sbjct: 449 TVGYRVTNFFAASSRY----GTPD----DFKRLVDEAHGLGLLVFLDIV--HSYAAADQM 498
Query: 385 PYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGF 444
+ F G N Y+ G ++ V+ ++ +L W+ EY VDG+
Sbjct: 499 VGLSLFDG-SNDCYFHYGKRGHHKHWGT--RMFKYGDLDVLHFLISNLNWWITEYQVDGY 555
Query: 445 RF-DLASVL 452
+F LAS++
Sbjct: 556 QFHSLASMI 564
Score = 86 (35.3 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
Identities = 32/103 (31%), Positives = 49/103 (47%)
Query: 239 FDWGDNYKLPNIPEKDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKI-PHLLELGIN 297
+ W Y P +PE L IYE +V SG +P++ ++ +K+ PH+ G N
Sbjct: 385 YKW--KYSKPKVPES-LRIYECHVGI------SGSEPKV-STFEEFTKKVLPHVKRAGYN 434
Query: 298 AVELLPVFEFDEMEFQRRRNPRDHMVNTWGYSTINFFSPMSRY 340
A++L+ V E +D+ T GY NFF+ SRY
Sbjct: 435 AIQLIGVPEH-----------KDYF--TVGYRVTNFFAASSRY 464
Score = 62 (26.9 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
Identities = 26/116 (22%), Positives = 47/116 (40%)
Query: 611 KNFHLALMVSQGTPMM-LMGDEYGHTRYGN--NNSYGHDTAINNFQWGQLETKKNSH-YR 666
K L S G + MG+E+GH S ++ N +W LE+ + H +
Sbjct: 718 KMIRLITFTSGGRAYLNFMGNEFGHPERVEFPTQSNNFSFSLANRRWDLLESGVHHHLFS 777
Query: 667 FFSEVIKFRQSRRVFGR--EDFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIY 720
F E++ +S+ + R ++ND ++ F+ F H +N + Y
Sbjct: 778 FDKELMDLDKSKGILSRGLPSIHHVNDANM-VISFSRGPFLFI-FNFHPSNSYEKY 831
>CGD|CAL0000583 [details] [associations]
symbol:GLC3 species:5476 "Candida albicans" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005978 "glycogen biosynthetic
process" evidence=IEA] [GO:0003844 "1,4-alpha-glucan branching
enzyme activity" evidence=IEA] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 InterPro:IPR013780 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0005978 InterPro:IPR014756
SUPFAM:SSF81296 EMBL:AACQ01000033 GO:GO:0003844
HOGENOM:HOG000175159 KO:K00700 RefSeq:XP_719298.1
ProteinModelPortal:Q5AC50 STRING:Q5AC50 GeneID:3639129
KEGG:cal:CaO19.13067 CGD:CAL0070583 Uniprot:Q5AC50
Length = 676
Score = 145 (56.1 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 43/131 (32%), Positives = 71/131 (54%)
Query: 325 TWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNE-ADDA 383
++GY +FF+ SRY G P E KE++ HG GI+V+LDVV++H+++ DD
Sbjct: 226 SFGYQVTSFFAISSRY----GTPD----ELKELIDTAHGMGIQVLLDVVHSHSSKNVDDG 277
Query: 384 NPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTL-NCNHPVVMELILDSLRHWVVEYHVD 442
F G D +Y+ G G N+ + L N + + +L +L++++ + D
Sbjct: 278 ---LNMFNGTD---HYLFHG-GSRGNHDLWDSRLFNYTNYETLRFLLSNLKYYIDVFQFD 330
Query: 443 GFRFD-LASVL 452
GFRFD + S+L
Sbjct: 331 GFRFDGVTSML 341
Score = 77 (32.2 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 21/69 (30%), Positives = 36/69 (52%)
Query: 241 WGDNYKLPNI-PEKDLVIYEMNV-RAFTGDESSGLDPEIRGSYLGLIQKI-PHLLELGIN 297
W DNY+ N P+K++ + + A G + +P I GSY Q + P + +LG N
Sbjct: 155 WEDNYQFKNPRPKKNIAAGGIKIYEAHVGISTP--EPTI-GSYKNFTQNVLPIIRDLGYN 211
Query: 298 AVELLPVFE 306
++L+ + E
Sbjct: 212 TIQLMAIME 220
>ASPGD|ASPL0000046871 [details] [associations]
symbol:AN2314 species:162425 "Emericella nidulans"
[GO:0005982 "starch metabolic process" evidence=RCA] [GO:0003844
"1,4-alpha-glucan branching enzyme activity" evidence=IEA;RCA]
[GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0043169 "cation binding" evidence=IEA]
[GO:0005978 "glycogen biosynthetic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 UniPathway:UPA00164
InterPro:IPR013780 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GO:GO:0004553 EMBL:BN001307 CAZy:CBM48
GO:GO:0005978 InterPro:IPR014756 SUPFAM:SSF81296 EMBL:AACD01000038
GO:GO:0003844 eggNOG:COG0296 HOGENOM:HOG000175159 KO:K00700
OMA:EIDPYLK EMBL:AB026630 RefSeq:XP_659918.1
ProteinModelPortal:Q9Y8H3 STRING:Q9Y8H3 GeneID:2875628
KEGG:ani:AN2314.2 OrthoDB:EOG47M562 Uniprot:Q9Y8H3
Length = 684
Score = 157 (60.3 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 45/130 (34%), Positives = 67/130 (51%)
Query: 325 TWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNE-ADDA 383
++GY NFF+ SRY G P + KE+V H G+ V+LDVV++H ++ DD
Sbjct: 231 SFGYQVNNFFAASSRY----GKPE----DLKELVDTAHSMGLVVLLDVVHSHASKNVDDG 282
Query: 384 NPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDG 443
F G D+ +Y+ GQ + N + V+ +L +LR W+ EY DG
Sbjct: 283 ---LNMFDGSDH-LYFHSGSKGQ--HELWDSRLFNYGNHEVLRFLLSNLRFWMEEYGFDG 336
Query: 444 FRFD-LASVL 452
FRFD + S+L
Sbjct: 337 FRFDGVTSML 346
Score = 55 (24.4 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 26/93 (27%), Positives = 37/93 (39%)
Query: 248 PNIPEKDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKIPHLLELGINAVELLPVFEF 307
P PE L IYE +V + D E + L P + LG NA++L+ + E
Sbjct: 174 PKKPES-LRIYEAHVGISSPDTRVATYKEFTANML------PRIKYLGYNAIQLMAIMEH 226
Query: 308 DEMEFQRRRNPRDHMVNTWGYSTINFFSPMSRY 340
++GY NFF+ SRY
Sbjct: 227 AYYA-------------SFGYQVNNFFAASSRY 246
Score = 43 (20.2 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 629 GDEYGHT------RYGNNNSY 643
G+E+GH R GNNNS+
Sbjct: 523 GNEFGHPEWLDFPRAGNNNSF 543
>TIGR_CMR|BA_4230 [details] [associations]
symbol:BA_4230 "alpha-amylase" species:198094 "Bacillus
anthracis str. Ames" [GO:0004556 "alpha-amylase activity"
evidence=ISS] [GO:0009313 "oligosaccharide catabolic process"
evidence=ISS] InterPro:IPR004185 InterPro:IPR006047
InterPro:IPR006589 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF00128 Pfam:PF02903 SMART:SM00642 InterPro:IPR013780
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 GO:GO:0005975
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553
InterPro:IPR014756 SUPFAM:SSF81296 CAZy:CBM34 RefSeq:NP_846465.1
RefSeq:YP_020872.1 RefSeq:YP_030173.1 HSSP:P38940
ProteinModelPortal:Q81ML7 SMR:Q81ML7 DNASU:1089021
EnsemblBacteria:EBBACT00000009332 EnsemblBacteria:EBBACT00000017860
EnsemblBacteria:EBBACT00000021056 GeneID:1089021 GeneID:2818229
GeneID:2850897 KEGG:ban:BA_4230 KEGG:bar:GBAA_4230 KEGG:bat:BAS3923
HOGENOM:HOG000055362 OMA:EIWHDAM ProtClustDB:CLSK873463
BioCyc:BANT260799:GJAJ-3980-MONOMER
BioCyc:BANT261594:GJ7F-4114-MONOMER Uniprot:Q81ML7
Length = 586
Score = 149 (57.5 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 52/183 (28%), Positives = 92/183 (50%)
Query: 279 GSYLGLIQKIPHLLELGINAVELLPVFEFDEMEFQRRRNPRDHMVNTWGYSTINFFSPMS 338
G + G+IQ + +L++LGI+ + P+F+ +H Y TI++
Sbjct: 173 GDFAGIIQNLDYLVKLGISGIYFTPIFKAHS----------NHK-----YDTIDYMEIDP 217
Query: 339 RYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHT----NEADDA--NPYTTSFRG 392
++ K + FKE+V+A H GI+V+LD V+NH+ ++ D N ++++
Sbjct: 218 QFGT------KET--FKELVQACHTHGIKVMLDAVFNHSGYFFDKFQDVLQNGEQSAYKE 269
Query: 393 IDNKVYYMVDGTGQLLNYAGCGNT-----LNCNHPVVMELILDSLRHWVVEYHVDGFRFD 447
+ ++ T L NY T LN HP V E +L+ R+WV E+++DG+R D
Sbjct: 270 WFH-IHEFPIRTEPLPNYDTFAFTPYMPKLNTAHPDVKEYLLEVGRYWVREFNIDGWRLD 328
Query: 448 LAS 450
+A+
Sbjct: 329 VAN 331
Score = 58 (25.5 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 27/117 (23%), Positives = 46/117 (39%)
Query: 613 FHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVI 672
FHL+ + G+P + GDE G G G D E + ++ + +I
Sbjct: 445 FHLSFI---GSPCIYYGDEIGMD--G-----GMDPDCRKCMVWDTEEQDHTLFTHVQTLI 494
Query: 673 KFRQSRRVFGRE---DFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIYLAFNAH 726
R+ + FG F+ ND + Y+ + + F L+ N +DI + H
Sbjct: 495 SLRKQYKAFGGHGTFQFIEANDEYNYISYTKTYEDETIFFVLNPTN-SDITASLPLH 550
>DICTYBASE|DDB_G0274105 [details] [associations]
symbol:glgB "branching enzyme" species:44689
"Dictyostelium discoideum" [GO:0043169 "cation binding"
evidence=IEA] [GO:0005978 "glycogen biosynthetic process"
evidence=IEA;ISS] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0003844 "1,4-alpha-glucan
branching enzyme activity" evidence=IEA;ISS] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006091 "generation of precursor metabolites and
energy" evidence=ISS] [GO:0005977 "glycogen metabolic process"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 UniPathway:UPA00164
InterPro:IPR013780 dictyBase:DDB_G0274105 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553
GenomeReviews:CM000151_GR CAZy:CBM48 GO:GO:0005978
EMBL:AAFI02000012 InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0003844
HSSP:P07762 eggNOG:COG0296 KO:K00700 RefSeq:XP_644004.1
ProteinModelPortal:Q555Q9 STRING:Q555Q9 EnsemblProtists:DDB0214943
GeneID:8619432 KEGG:ddi:DDB_G0274105 OMA:EIDPYLK
ProtClustDB:CLSZ2431015 Uniprot:Q555Q9
Length = 678
Score = 147 (56.8 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 47/126 (37%), Positives = 63/126 (50%)
Query: 325 TWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHT--NEADD 382
++GY NFF+ SR+ G P E KEM+ H G+ V LDVV++H N D
Sbjct: 229 SFGYQVTNFFAISSRF----GTPE----ELKEMIDKAHEMGLLVFLDVVHSHASKNVLDG 280
Query: 383 ANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTL-NCNHPVVMELILDSLRHWVVEYHV 441
N G D+ Y+ G G N+ + L N + VM +L +LR +V EYH
Sbjct: 281 LN----QLDGTDHH-YFHSGGRG---NHELWDSRLFNYGNWEVMRFLLSNLRFYVDEYHF 332
Query: 442 DGFRFD 447
DGFRFD
Sbjct: 333 DGFRFD 338
Score = 51 (23.0 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 30/96 (31%), Positives = 42/96 (43%)
Query: 246 KLPNIPEKDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKI-PHLLELGINAVELLPV 304
K P P +L IYE +V SS L PEI +Y + P + ELG N ++L+ V
Sbjct: 170 KSPMKPT-ELRIYEAHVGM-----SSEL-PEI-STYSKFKDTVLPMVKELGYNCIQLMAV 221
Query: 305 FEFDEMEFQRRRNPRDHMVNTWGYSTINFFSPMSRY 340
E ++GY NFF+ SR+
Sbjct: 222 MEHAYYA-------------SFGYQVTNFFAISSRF 244
Score = 50 (22.7 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 628 MGDEYGHT------RYGNNNSYGH 645
MG+E+GH R GNNNS H
Sbjct: 518 MGNEFGHPEWVDFPREGNNNSLHH 541
>ZFIN|ZDB-GENE-110411-171 [details] [associations]
symbol:si:ch211-213e17.1 "si:ch211-213e17.1"
species:7955 "Danio rerio" [GO:0043169 "cation binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003844 "1,4-alpha-glucan branching enzyme activity"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0005978 "glycogen biosynthetic process"
evidence=IEA] [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 InterPro:IPR013780
ZFIN:ZDB-GENE-110411-171 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0005978
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0003844
GeneTree:ENSGT00390000017040 EMBL:BX537292 EMBL:CU075735
EMBL:CU915763 IPI:IPI01024250 Ensembl:ENSDART00000149265
Uniprot:F8W5I0
Length = 688
Score = 142 (55.0 bits), Expect = 5.2e-07, Sum P(3) = 5.2e-07
Identities = 42/130 (32%), Positives = 66/130 (50%)
Query: 325 TWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNH-TNEADDA 383
++GY NFF+ SR+ G P + K +V H GI V+LDVV++H ++ +D
Sbjct: 232 SFGYQVTNFFAASSRF----GTPD----DLKHLVDTAHSMGIAVLLDVVHSHASSNTEDG 283
Query: 384 NPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDG 443
Y F G D+ ++ G + + N + V+ +L +LR W+ EY DG
Sbjct: 284 LNY---FDGTDSCFFH---GGSRGKHSLWDSRLFNYSSWEVLRFLLSNLRWWMEEYRFDG 337
Query: 444 FRFD-LASVL 452
FRFD + S+L
Sbjct: 338 FRFDGVTSML 347
Score = 55 (24.4 bits), Expect = 5.2e-07, Sum P(3) = 5.2e-07
Identities = 32/125 (25%), Positives = 53/125 (42%)
Query: 226 SKFLGTYEFESLPFDWGD-------NYKLPNIPE-KDLVIYEMNVRAFTGDESSGLDPEI 277
+K++ T +S+ +DW ++ P P L IYE +V G S PE
Sbjct: 145 AKYV-TKTVDSVTYDWTHWDPPQPYQFQHPRPPRPSSLRIYEAHV----GISS----PEE 195
Query: 278 R-GSYLGLIQKI-PHLLELGINAVELLPVFEFDEMEFQRRRNPRDHMVNTWGYSTINFFS 335
+ SY + + P + +LG N V+L+ + E ++GY NFF+
Sbjct: 196 KIASYKNFTRDVLPRIKDLGYNCVQLMAIMEHAYYA-------------SFGYQVTNFFA 242
Query: 336 PMSRY 340
SR+
Sbjct: 243 ASSRF 247
Score = 46 (21.3 bits), Expect = 5.2e-07, Sum P(3) = 5.2e-07
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 628 MGDEYGHT------RYGNNNSY 643
MG+E+GH R GNN SY
Sbjct: 523 MGNEFGHPEWLDFPRKGNNESY 544
>TIGR_CMR|GSU_2358 [details] [associations]
symbol:GSU_2358 "isoamylase family protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0016052 "carbohydrate catabolic
process" evidence=ISS] [GO:0019156 "isoamylase activity"
evidence=ISS] InterPro:IPR006047 InterPro:IPR012768
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128
PIRSF:PIRSF006337 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 PANTHER:PTHR10357 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014756 SUPFAM:SSF81296
GO:GO:0005992 InterPro:IPR022567 Pfam:PF11941 HOGENOM:HOG000155669
KO:K01236 OMA:YAPDSAY GO:GO:0033942 PANTHER:PTHR10357:SF21
TIGRFAMs:TIGR02402 RefSeq:NP_953405.1 ProteinModelPortal:Q74AJ6
GeneID:2686146 KEGG:gsu:GSU2358 PATRIC:22027565
ProtClustDB:CLSK924601 BioCyc:GSUL243231:GH27-2352-MONOMER
Uniprot:Q74AJ6
Length = 630
Score = 135 (52.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 42/122 (34%), Positives = 56/122 (45%)
Query: 326 WGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANP 385
WGY + F+P Y GGP K +V A H G+ VILDVVYNH + N
Sbjct: 161 WGYDGVFPFAPHHAY----GGPDG----LKSLVDACHRRGLAVILDVVYNHLGP--EGN- 209
Query: 386 YTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFR 445
Y +F +Y G +N+ G G+ H V+ + HW+ EYH+DG R
Sbjct: 210 YLHAFAPYFTD-HYRTPW-GDAVNFDGPGSD-GVRHYVIGNAL-----HWISEYHLDGLR 261
Query: 446 FD 447
D
Sbjct: 262 LD 263
Score = 61 (26.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 25/101 (24%), Positives = 47/101 (46%)
Query: 605 LRSRQMKNFHLALMVSQGTPMMLMGDEYGHTR-YGNNNSYGHDTAINNFQWGQLETKKNS 663
L Q+K A+++S P++ MG+EYG T + S+G + + G+ E + +
Sbjct: 409 LSPEQLKLAAGAVILSPYLPLIFMGEEYGETAPFPYFTSHGDPALVEAVRRGRRE--EFA 466
Query: 664 HYRFFSEVIKFRQSRRVFGREDFLN--INDVTWHEDNWDNY 702
+ + +EV Q F R ++ + V WH+ + Y
Sbjct: 467 AFGWEAEVPD-PQDEATF-RSALIDPELRSVGWHQQVFSFY 505
Score = 38 (18.4 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 27/117 (23%), Positives = 47/117 (40%)
Query: 665 YRFFSEVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIYLAFN 724
+ F+ EVI+ R+ F R + I VT E + + + L A++ + F
Sbjct: 502 FSFYREVIRLRRQLPSFRRPEREEIQ-VTGLEAD------RVVVVRLCRGQ-AELVVLFA 553
Query: 725 AHDFFVKVSLPPPPPK-RQWFRVVDTNLESPDDIVPEGAAG--TGSTYNLSPYSSIL 778
+ +V LP + R+ + P + PE G G L+P+S +L
Sbjct: 554 LAETSCRVRLPFRHGRYRKLLDSAEPRWGGPGALAPEALDGGDEGIGITLAPFSVVL 610
>ZFIN|ZDB-GENE-110914-16 [details] [associations]
symbol:si:ch211-247m23.1 "si:ch211-247m23.1"
species:7955 "Danio rerio" [GO:0043169 "cation binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003844 "1,4-alpha-glucan branching enzyme activity"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0005978 "glycogen biosynthetic process"
evidence=IEA] [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 InterPro:IPR013780
ZFIN:ZDB-GENE-110914-16 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0005978
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0003844
GeneTree:ENSGT00390000017040 EMBL:CR753871 EMBL:CR854842
EMBL:CU013513 Ensembl:ENSDART00000150771 Uniprot:H0WF64
Length = 630
Score = 139 (54.0 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 45/132 (34%), Positives = 65/132 (49%)
Query: 325 TWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHT--NEADD 382
++GY +FF+ SRY G P E KE++ H GI V+LDVV++H N D
Sbjct: 233 SFGYQVTSFFAASSRY----GTPE----ELKELIDVAHSLGIIVLLDVVHSHASKNTEDG 284
Query: 383 ANPYTTSFRGIDNKVYYMVD-GTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHV 441
N F G D+ ++ G L + N + V+ +L +LR W+ EY
Sbjct: 285 LN----LFDGSDSCFFHSGPRGEHSLWD----SRLFNYSSWEVLRFLLSNLRWWMEEYKF 336
Query: 442 DGFRFD-LASVL 452
DGFRFD + S+L
Sbjct: 337 DGFRFDGVTSML 348
Score = 52 (23.4 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 34/126 (26%), Positives = 57/126 (45%)
Query: 226 SKFLGTYEFESLPFDW--GDN-----YKLPNIPEK--DLVIYEMNVRAFTGDESSGLDPE 276
+K++ +E +S+ +DW D +K P P+K L IYE +V G S PE
Sbjct: 146 AKYVTRHE-KSVIYDWVHWDPPQPYIHKHPR-PQKPRSLRIYESHV----GIAS----PE 195
Query: 277 IR-GSYLGLIQKI-PHLLELGINAVELLPVFEFDEMEFQRRRNPRDHMVNTWGYSTINFF 334
+ SY + P + +LG N+++L+ + E ++GY +FF
Sbjct: 196 GKIASYSNFTHNVLPRIKDLGYNSIQLMAIMEHAYYA-------------SFGYQVTSFF 242
Query: 335 SPMSRY 340
+ SRY
Sbjct: 243 AASSRY 248
Score = 47 (21.6 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 628 MGDEYGHT------RYGNNNSY 643
MG+E+GH R GNN SY
Sbjct: 524 MGNEFGHPEWLDFPRIGNNESY 545
>UNIPROTKB|Q9KNE8 [details] [associations]
symbol:glgB "1,4-alpha-glucan branching enzyme GlgB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003844 "1,4-alpha-glucan branching enzyme activity"
evidence=ISS] [GO:0005978 "glycogen biosynthetic process"
evidence=ISS] HAMAP:MF_00685 InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 UniPathway:UPA00164 InterPro:IPR013780
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 CAZy:CBM48
GO:GO:0005978 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0003844 eggNOG:COG0296
KO:K00700 ProtClustDB:PRK05402 PANTHER:PTHR10357:SF13
TIGRFAMs:TIGR01515 OMA:YNLGRTE PIR:D82511 RefSeq:NP_232417.1
ProteinModelPortal:Q9KNE8 DNASU:2612506 GeneID:2612506
KEGG:vch:VCA0016 PATRIC:20084623 Uniprot:Q9KNE8
Length = 666
Score = 102 (41.0 bits), Expect = 1.8e-06, Sum P(4) = 1.8e-06
Identities = 39/130 (30%), Positives = 60/130 (46%)
Query: 325 TWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDAN 384
+WGY + F+P SRY G P +FK V H AGI V+LD V H D++
Sbjct: 237 SWGYQPVGLFAPTSRY----GSPD----DFKYFVDLCHQAGIGVVLDWVPAHF--PSDSH 286
Query: 385 PYTTSFRGIDNKVYYMVDGT-GQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDG 443
+F G +++ D G ++ L H V ++ + +W +H+DG
Sbjct: 287 GLA-NFDG--TPLFHDPDPRRGWHQDWNSYIYDLGREH--VRRFLVANALYWFEMFHIDG 341
Query: 444 FRFD-LASVL 452
R D +AS+L
Sbjct: 342 IRVDAVASML 351
Score = 89 (36.4 bits), Expect = 1.8e-06, Sum P(4) = 1.8e-06
Identities = 35/117 (29%), Positives = 54/117 (46%)
Query: 231 TYEFESLPFDWGDN-YKLPNIPEKD---LVIYEMNVRAFTGDESSGLDPEIRGSYLGLI- 285
TY+ + W D ++ + EK L YE++V G G + E +Y L
Sbjct: 158 TYDHRR--YQWQDTAWQQRPVTEKRKQALSFYELHV----GSWKRGENGEFL-NYRELAD 210
Query: 286 QKIPHLLELGINAVELLPVFEFDEMEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAA 342
Q +P+L+E+G VEL+PV E +P +WGY + F+P SRY +
Sbjct: 211 QLVPYLVEMGYTHVELMPVAE----------HP---FYGSWGYQPVGLFAPTSRYGS 254
Score = 50 (22.7 bits), Expect = 1.8e-06, Sum P(4) = 1.8e-06
Identities = 23/81 (28%), Positives = 36/81 (44%)
Query: 119 NGINFAIFSQHATAVTLCLSLPKREKLDWQDGGMIELPLDPRVNKTGDIWHICIEDLPRS 178
+G+ F +++ HA A +L + W DG P+ R++ G IW I I LP
Sbjct: 74 SGVRFLVYAPHAAACSLIGAFNH-----W-DGR--RHPMQ-RLDY-G-IWGIFIPGLPEG 122
Query: 179 EVLYGYRVDGPRDWHQGHRFD 199
Y + + GP H+ D
Sbjct: 123 -TQYKFELKGPHGEGLPHKAD 142
Score = 38 (18.4 bits), Expect = 1.8e-06, Sum P(4) = 1.8e-06
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 505 EWNGKYRDDLRKFIKGDP 522
+WN + D +IK DP
Sbjct: 420 KWNMGWMHDSLSYIKEDP 437
>TIGR_CMR|VC_A0016 [details] [associations]
symbol:VC_A0016 "1,4-alpha-glucan branching enzyme"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0003844
"1,4-alpha-glucan branching enzyme activity" evidence=ISS]
[GO:0005978 "glycogen biosynthetic process" evidence=ISS]
HAMAP:MF_00685 InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 UniPathway:UPA00164 InterPro:IPR013780
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 CAZy:CBM48
GO:GO:0005978 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0003844 eggNOG:COG0296
KO:K00700 ProtClustDB:PRK05402 PANTHER:PTHR10357:SF13
TIGRFAMs:TIGR01515 OMA:YNLGRTE PIR:D82511 RefSeq:NP_232417.1
ProteinModelPortal:Q9KNE8 DNASU:2612506 GeneID:2612506
KEGG:vch:VCA0016 PATRIC:20084623 Uniprot:Q9KNE8
Length = 666
Score = 102 (41.0 bits), Expect = 1.8e-06, Sum P(4) = 1.8e-06
Identities = 39/130 (30%), Positives = 60/130 (46%)
Query: 325 TWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDAN 384
+WGY + F+P SRY G P +FK V H AGI V+LD V H D++
Sbjct: 237 SWGYQPVGLFAPTSRY----GSPD----DFKYFVDLCHQAGIGVVLDWVPAHF--PSDSH 286
Query: 385 PYTTSFRGIDNKVYYMVDGT-GQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDG 443
+F G +++ D G ++ L H V ++ + +W +H+DG
Sbjct: 287 GLA-NFDG--TPLFHDPDPRRGWHQDWNSYIYDLGREH--VRRFLVANALYWFEMFHIDG 341
Query: 444 FRFD-LASVL 452
R D +AS+L
Sbjct: 342 IRVDAVASML 351
Score = 89 (36.4 bits), Expect = 1.8e-06, Sum P(4) = 1.8e-06
Identities = 35/117 (29%), Positives = 54/117 (46%)
Query: 231 TYEFESLPFDWGDN-YKLPNIPEKD---LVIYEMNVRAFTGDESSGLDPEIRGSYLGLI- 285
TY+ + W D ++ + EK L YE++V G G + E +Y L
Sbjct: 158 TYDHRR--YQWQDTAWQQRPVTEKRKQALSFYELHV----GSWKRGENGEFL-NYRELAD 210
Query: 286 QKIPHLLELGINAVELLPVFEFDEMEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAA 342
Q +P+L+E+G VEL+PV E +P +WGY + F+P SRY +
Sbjct: 211 QLVPYLVEMGYTHVELMPVAE----------HP---FYGSWGYQPVGLFAPTSRYGS 254
Score = 50 (22.7 bits), Expect = 1.8e-06, Sum P(4) = 1.8e-06
Identities = 23/81 (28%), Positives = 36/81 (44%)
Query: 119 NGINFAIFSQHATAVTLCLSLPKREKLDWQDGGMIELPLDPRVNKTGDIWHICIEDLPRS 178
+G+ F +++ HA A +L + W DG P+ R++ G IW I I LP
Sbjct: 74 SGVRFLVYAPHAAACSLIGAFNH-----W-DGR--RHPMQ-RLDY-G-IWGIFIPGLPEG 122
Query: 179 EVLYGYRVDGPRDWHQGHRFD 199
Y + + GP H+ D
Sbjct: 123 -TQYKFELKGPHGEGLPHKAD 142
Score = 38 (18.4 bits), Expect = 1.8e-06, Sum P(4) = 1.8e-06
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 505 EWNGKYRDDLRKFIKGDP 522
+WN + D +IK DP
Sbjct: 420 KWNMGWMHDSLSYIKEDP 437
>UNIPROTKB|F1PX32 [details] [associations]
symbol:GBE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043169 "cation binding" evidence=IEA]
[GO:0005978 "glycogen biosynthetic process" evidence=IEA]
[GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0003844 "1,4-alpha-glucan branching enzyme
activity" evidence=IEA] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 InterPro:IPR013780 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0005978 InterPro:IPR014756
SUPFAM:SSF81296 GO:GO:0003844 KO:K00700 OMA:EIDPYLK CTD:2632
GeneTree:ENSGT00390000017040 EMBL:AAEX03016422 EMBL:AAEX03016423
RefSeq:XP_535555.3 Ensembl:ENSCAFT00000012537 GeneID:478380
KEGG:cfa:478380 Uniprot:F1PX32
Length = 699
Score = 140 (54.3 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 44/132 (33%), Positives = 67/132 (50%)
Query: 325 TWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHT--NEADD 382
++GY +FF+ SRY G P E KE++ H GI V+LDVV++H N D
Sbjct: 245 SFGYQITSFFAASSRY----GTPE----ELKELIDTAHSMGITVLLDVVHSHASKNSEDG 296
Query: 383 ANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHP-VVMELILDSLRHWVVEYHV 441
N F G D+ ++ +G N+ + L V+ +L ++R W+ EY+
Sbjct: 297 LN----MFDGTDSCYFH----SGPRGNHDLWDSRLFAYSSWEVLRFLLSNIRWWLEEYYF 348
Query: 442 DGFRFD-LASVL 452
DGFRFD + S+L
Sbjct: 349 DGFRFDGVTSML 360
Score = 46 (21.3 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 628 MGDEYGHT------RYGNNNSY 643
MG+E+GH R GNN SY
Sbjct: 536 MGNEFGHPEWLDFPRKGNNESY 557
Score = 46 (21.3 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 31/124 (25%), Positives = 54/124 (43%)
Query: 226 SKFLGTYEFESLPFDW-----GDNYKLPNI-PEKD--LVIYEMNVRAFTGDESSGLDPEI 277
+K++ T E +++ +DW YK + P+K L IYE +V S + +I
Sbjct: 158 AKYV-TREGDNVNYDWIHWDPEHPYKFKHSKPKKPRGLRIYESHVGI------SSYEGKI 210
Query: 278 RGSYLGLIQKI-PHLLELGINAVELLPVFEFDEMEFQRRRNPRDHMVNTWGYSTINFFSP 336
SY + P + +LG N ++L+ + E ++GY +FF+
Sbjct: 211 -ASYKHFTCNVLPRIKDLGYNCIQLMAIMEHAYYA-------------SFGYQITSFFAA 256
Query: 337 MSRY 340
SRY
Sbjct: 257 SSRY 260
>UNIPROTKB|E1C303 [details] [associations]
symbol:GBE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003844 "1,4-alpha-glucan branching enzyme activity"
evidence=IEA] [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0005978 "glycogen
biosynthetic process" evidence=IEA] [GO:0043169 "cation binding"
evidence=IEA] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006407 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF00128 Pfam:PF02922 PIRSF:PIRSF000463 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 PANTHER:PTHR10357 GO:GO:0004553
GO:GO:0005978 InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0003844
OMA:IAVIMDI GeneTree:ENSGT00390000017040 EMBL:AADN02042252
EMBL:AADN02042253 EMBL:AADN02042254 EMBL:AADN02042255
EMBL:AADN02042256 EMBL:AADN02042257 IPI:IPI00596853
ProteinModelPortal:E1C303 Ensembl:ENSGALT00000025002 Uniprot:E1C303
Length = 588
Score = 138 (53.6 bits), Expect = 7.2e-06, Sum P(3) = 7.2e-06
Identities = 42/132 (31%), Positives = 67/132 (50%)
Query: 325 TWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHT--NEADD 382
++GY +FF+ SRY G P + KE++ H GI V+LDVV++H N D
Sbjct: 234 SFGYQVTSFFAASSRY----GTPD----DLKELIDVAHSMGITVLLDVVHSHASKNSEDG 285
Query: 383 ANPYTTSFRGIDNKVYYMVD-GTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHV 441
N F G D+ ++ GT ++ + + + V+ +L +LR W+ +Y
Sbjct: 286 LN----KFDGTDSCFFHSGPRGTHRIWD----SRLFDYANWEVLRFLLSNLRMWIEDYGF 337
Query: 442 DGFRFD-LASVL 452
DGFRFD + S+L
Sbjct: 338 DGFRFDGVTSML 349
Score = 49 (22.3 bits), Expect = 7.2e-06, Sum P(3) = 7.2e-06
Identities = 26/90 (28%), Positives = 38/90 (42%)
Query: 253 KDLVIYEMNVRAFTGDESSGLDPEIR-GSYLGLIQKI-PHLLELGINAVELLPVFEFDEM 310
K L IYE +V G S PE + SY + P + +LG N ++L+ V E
Sbjct: 181 KSLRIYESHV----GIAS----PEGKIASYKNFTYNVLPRIRDLGYNCIQLMAVMEHAYY 232
Query: 311 EFQRRRNPRDHMVNTWGYSTINFFSPMSRY 340
++GY +FF+ SRY
Sbjct: 233 A-------------SFGYQVTSFFAASSRY 249
Score = 42 (19.8 bits), Expect = 7.2e-06, Sum P(3) = 7.2e-06
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 628 MGDEYGHT------RYGNNNSY 643
MG+E+GH R GNN S+
Sbjct: 525 MGNEFGHPEWLDFPRKGNNESF 546
>MGI|MGI:1921435 [details] [associations]
symbol:Gbe1 "glucan (1,4-alpha-), branching enzyme 1"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003844 "1,4-alpha-glucan branching enzyme
activity" evidence=ISO] [GO:0004553 "hydrolase activity,
hydrolyzing O-glycosyl compounds" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0005978
"glycogen biosynthetic process" evidence=ISO] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016757 "transferase
activity, transferring glycosyl groups" evidence=IEA] [GO:0030246
"carbohydrate binding" evidence=ISO] [GO:0043169 "cation binding"
evidence=IEA] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 UniPathway:UPA00164 InterPro:IPR013780
MGI:MGI:1921435 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 CAZy:CBM48
GO:GO:0005978 InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0003844
eggNOG:COG0296 HOGENOM:HOG000175159 KO:K00700 OMA:EIDPYLK CTD:2632
HOVERGEN:HBG051734 OrthoDB:EOG4F1X2K EMBL:AK009815 EMBL:AK050365
EMBL:BC017541 IPI:IPI00109823 RefSeq:NP_083079.1 UniGene:Mm.396102
ProteinModelPortal:Q9D6Y9 SMR:Q9D6Y9 STRING:Q9D6Y9
PhosphoSite:Q9D6Y9 PaxDb:Q9D6Y9 PRIDE:Q9D6Y9
Ensembl:ENSMUST00000163832 GeneID:74185 KEGG:mmu:74185
UCSC:uc007zqu.1 GeneTree:ENSGT00390000017040 InParanoid:Q9D6Y9
NextBio:340028 Bgee:Q9D6Y9 CleanEx:MM_GBE1 Genevestigator:Q9D6Y9
GermOnline:ENSMUSG00000022707 Uniprot:Q9D6Y9
Length = 702
Score = 136 (52.9 bits), Expect = 7.6e-06, Sum P(3) = 7.6e-06
Identities = 45/132 (34%), Positives = 65/132 (49%)
Query: 325 TWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHT--NEADD 382
++GY +FF+ SRY G P E KE+V H GI V+LDVV++H N D
Sbjct: 248 SFGYQITSFFAASSRY----GTPE----ELKELVDTAHSMGIVVLLDVVHSHASKNSEDG 299
Query: 383 ANPYTTSFRGIDNKVYYMVD-GTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHV 441
N F G D+ ++ GT L + + V+ +L ++R W+ EY
Sbjct: 300 LN----MFDGTDSCYFHSGPRGTHDLWD----SRLFIYSSWEVLRFLLSNIRWWLEEYCF 351
Query: 442 DGFRFD-LASVL 452
DGFRFD + S+L
Sbjct: 352 DGFRFDGVTSML 363
Score = 50 (22.7 bits), Expect = 7.6e-06, Sum P(3) = 7.6e-06
Identities = 31/117 (26%), Positives = 50/117 (42%)
Query: 233 EFESLPFDW-----GDNYKLPNI-PEK--DLVIYEMNVRAFTGDESSGLDPEIRGSYLGL 284
E ++ +DW D YK + P+K L IYE +V G S + +I SY
Sbjct: 167 ENNNVNYDWIHWAPEDPYKFKHSRPKKPRSLRIYESHV----GISSH--EGKI-ASYKHF 219
Query: 285 IQKI-PHLLELGINAVELLPVFEFDEMEFQRRRNPRDHMVNTWGYSTINFFSPMSRY 340
+ P + +LG N ++L+ + E ++GY +FF+ SRY
Sbjct: 220 TSNVLPRIKDLGYNCIQLMAIMEHAYYA-------------SFGYQITSFFAASSRY 263
Score = 46 (21.3 bits), Expect = 7.6e-06, Sum P(3) = 7.6e-06
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 628 MGDEYGHT------RYGNNNSY 643
MG+E+GH R GNN SY
Sbjct: 539 MGNEFGHPEWLDFPRKGNNESY 560
>RGD|1309968 [details] [associations]
symbol:Gbe1 "glucan (1,4-alpha-), branching enzyme 1"
species:10116 "Rattus norvegicus" [GO:0003844 "1,4-alpha-glucan
branching enzyme activity" evidence=IDA] [GO:0005978 "glycogen
biosynthetic process" evidence=IDA] [GO:0030246 "carbohydrate
binding" evidence=IDA] InterPro:IPR006047 InterPro:IPR006048
InterPro:IPR006407 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF00128 Pfam:PF02806 PIRSF:PIRSF000463 InterPro:IPR013780
RGD:1309968 GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853
SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180 PANTHER:PTHR10357
GO:GO:0030246 GO:GO:0005978 GO:GO:0003844 KO:K00700 CTD:2632
HOVERGEN:HBG051734 IPI:IPI00363180 EMBL:BC090037
RefSeq:NP_001093972.1 UniGene:Rn.29938 ProteinModelPortal:Q5EB55
PRIDE:Q5EB55 GeneID:288333 KEGG:rno:288333 UCSC:RGD:1309968
NextBio:627978 Genevestigator:Q5EB55 Uniprot:Q5EB55
Length = 536
Score = 133 (51.9 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 45/132 (34%), Positives = 65/132 (49%)
Query: 325 TWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHT--NEADD 382
++GY +FF+ SRY G P E KE+V H GI V+LDVV++H N D
Sbjct: 82 SFGYQVTSFFAASSRY----GTPE----ELKELVDTAHLMGIVVLLDVVHSHASKNSEDG 133
Query: 383 ANPYTTSFRGIDNKVYYMVD-GTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHV 441
N F G D+ ++ GT L + + V+ +L ++R W+ EY
Sbjct: 134 LN----MFDGTDSCYFHSGPRGTHDLWD----SRLFIYSSWEVLRFLLSNIRWWLEEYCF 185
Query: 442 DGFRFD-LASVL 452
DGFRFD + S+L
Sbjct: 186 DGFRFDGVTSML 197
Score = 47 (21.6 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 31/117 (26%), Positives = 51/117 (43%)
Query: 233 EFESLPFDW----GDN-YKLPNI-PEK--DLVIYEMNVRAFTGDESSGLDPEIRGSYLGL 284
E ++ +DW +N YK + P+K L IYE +V G S + +I SY
Sbjct: 1 ENNNVNYDWIHWDPENPYKFRHSRPKKPRSLRIYESHV----GISSH--EGKI-ASYKHF 53
Query: 285 IQKI-PHLLELGINAVELLPVFEFDEMEFQRRRNPRDHMVNTWGYSTINFFSPMSRY 340
+ P + +LG N ++L+ + E ++GY +FF+ SRY
Sbjct: 54 TSNVLPRIKDLGYNCIQLMAIMEHAYYA-------------SFGYQVTSFFAASSRY 97
Score = 46 (21.3 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 628 MGDEYGHT------RYGNNNSY 643
MG+E+GH R GNN SY
Sbjct: 373 MGNEFGHPEWLDFPRKGNNESY 394
>TAIR|locus:2044903 [details] [associations]
symbol:SBE2.1 "starch branching enzyme 2.1" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0043169 "cation binding" evidence=IEA]
[GO:0003844 "1,4-alpha-glucan branching enzyme activity"
evidence=ISS;IDA] [GO:0005982 "starch metabolic process"
evidence=RCA;IMP] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0000272 "polysaccharide catabolic process" evidence=RCA]
[GO:0009664 "plant-type cell wall organization" evidence=RCA]
[GO:0019252 "starch biosynthetic process" evidence=RCA] [GO:0010021
"amylopectin biosynthetic process" evidence=TAS] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 UniPathway:UPA00152
InterPro:IPR013780 GO:GO:0009570 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071333 GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853
SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180 PANTHER:PTHR10357
GO:GO:0004553 CAZy:CBM48 GO:GO:0005978 EMBL:AC006919
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0071329 GO:GO:0003844
GO:GO:0071482 GO:GO:0009501 GO:GO:0005982 EMBL:AJ000497
EMBL:AY136411 EMBL:AK226896 EMBL:U18817 IPI:IPI00543392 PIR:B84780
PIR:S65045 RefSeq:NP_181180.1 UniGene:At.24317 UniGene:At.67284
HSSP:P07762 ProteinModelPortal:O23647 SMR:O23647 STRING:O23647
PaxDb:O23647 PRIDE:O23647 ProMEX:O23647 EnsemblPlants:AT2G36390.1
GeneID:818212 KEGG:ath:AT2G36390 TAIR:At2g36390 eggNOG:COG0296
HOGENOM:HOG000175159 InParanoid:O23647 KO:K00700 OMA:IAVIMDI
PhylomeDB:O23647 ProtClustDB:PLN02447 Genevestigator:O23647
GO:GO:0010021 GO:GO:0071332 GO:GO:0019252 Uniprot:O23647
Length = 858
Score = 128 (50.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 35/123 (28%), Positives = 59/123 (47%)
Query: 325 TWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDAN 384
++GY NFF+P SR+ G P + K ++ H G+ V++D+V++H ++ +
Sbjct: 377 SFGYHVTNFFAPSSRF----GTPD----DLKSLIDKAHELGLVVLMDIVHSHASK--NTL 426
Query: 385 PYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGF 444
F G D + Y+ G ++ N V+ +L + R W+ EY DGF
Sbjct: 427 DGLDMFDGTDGQ-YFHSGSRGY--HWMWDSRLFNYGSWEVLRYLLSNARWWLEEYKFDGF 483
Query: 445 RFD 447
RFD
Sbjct: 484 RFD 486
Score = 62 (26.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 29/100 (29%), Positives = 49/100 (49%)
Query: 245 YKLPNIPEK--DLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKI-PHLLELGINAVEL 301
+K P P+K L IYE +V G S+ +P+I +Y + P + +LG NAV++
Sbjct: 315 FKHPR-PKKPTSLRIYESHV----GMSST--EPKIN-TYANFRDDVLPRIKKLGYNAVQI 366
Query: 302 LPVFEFDEMEFQRRRNPRDHMVN-TWGYSTINFFSPMSRY 340
+ + ++H ++GY NFF+P SR+
Sbjct: 367 MAI--------------QEHAYYASFGYHVTNFFAPSSRF 392
Score = 43 (20.2 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 42/181 (23%), Positives = 66/181 (36%)
Query: 153 IELPLDPRVNKTGDIWHICIEDLPRSE-VLYGYRVDGPRDWH-----QGHRFDSSIVLID 206
+ P P + K H EDL RS V + R D + DSS +
Sbjct: 8 VRFPHLPSIKKKNSSLHSFNEDLRRSNAVSFSLRKDSRSSGKVFARKPSYDSDSSSLATT 67
Query: 207 PYAKLVEGRRHFGDASAKLSKFLGTYEFESLPFDWGDNYKLPNIPEKDLVIYEMNVRAFT 266
KL R H D+S+ S + + + S D L N+ D+ E T
Sbjct: 68 ASEKL---RGHQSDSSSSASDQVQSRDTVS-----DDTQVLGNV---DVQKTEEAQETET 116
Query: 267 GDESSGLDPEIRGSYLGLIQKIPHLLELGINAVELLP------VFEFDEMEFQRRRNPRD 320
D++S L SY K+ H ++ + ++ P +++ D M RN D
Sbjct: 117 LDQTSALSTSGSISYKEDFAKMSHSVDQEVGQRKIPPPGDGKRIYDIDPM-LNSHRNHLD 175
Query: 321 H 321
+
Sbjct: 176 Y 176
>UNIPROTKB|F1SK65 [details] [associations]
symbol:F1SK65 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043169 "cation binding" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0004553
"hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02922
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 GO:GO:0005975
PANTHER:PTHR10357 GO:GO:0004553 GeneTree:ENSGT00390000017040
EMBL:CU466470 Ensembl:ENSSSCT00000013131 OMA:ALEWAPA
ArrayExpress:F1SK65 Uniprot:F1SK65
Length = 319
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 43/132 (32%), Positives = 65/132 (49%)
Query: 325 TWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHT--NEADD 382
++GY +FF+ SRY G P E KE+V H GI V+LD+V++H N D
Sbjct: 183 SFGYQITSFFAASSRY----GTPE----ELKELVDTAHSMGITVLLDLVHSHASKNSEDG 234
Query: 383 ANPYTTSFRGIDNKVY-YMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHV 441
N F G ++ + Y G L + + + V+ +L ++R W+ EY
Sbjct: 235 LN----MFDGTESCYFHYGPRGNHNLWD----SRLFDYSSWEVLRFLLSNIRWWLEEYGF 286
Query: 442 DGFRFD-LASVL 452
DGFRFD + S+L
Sbjct: 287 DGFRFDGVTSML 298
>UNIPROTKB|E9PGM4 [details] [associations]
symbol:GBE1 "1,4-alpha-glucan-branching enzyme"
species:9606 "Homo sapiens" [GO:0003844 "1,4-alpha-glucan branching
enzyme activity" evidence=IEA] [GO:0004553 "hydrolase activity,
hydrolyzing O-glycosyl compounds" evidence=IEA] [GO:0005978
"glycogen biosynthetic process" evidence=IEA] [GO:0043169 "cation
binding" evidence=IEA] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 InterPro:IPR013780 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0005978 InterPro:IPR014756
SUPFAM:SSF81296 GO:GO:0003844 EMBL:AC017015 EMBL:AC025029
EMBL:AC099049 HGNC:HGNC:4180 ChiTaRS:GBE1 IPI:IPI00789251
ProteinModelPortal:E9PGM4 SMR:E9PGM4 Ensembl:ENST00000489715
UCSC:uc021xax.1 ArrayExpress:E9PGM4 Bgee:E9PGM4 Uniprot:E9PGM4
Length = 661
Score = 139 (54.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 44/132 (33%), Positives = 66/132 (50%)
Query: 325 TWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHT--NEADD 382
++GY +FF+ SRY G P E +E+V H GI V+LDVV++H N AD
Sbjct: 207 SFGYQITSFFAASSRY----GTPE----ELQELVDTAHSMGIIVLLDVVHSHASKNSADG 258
Query: 383 ANPYTTSFRGIDNKVYYMVD-GTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHV 441
N F G D+ ++ GT L + + ++ +L ++R W+ EY
Sbjct: 259 LN----MFDGTDSCYFHSGPRGTHDLWD----SRLFAYSSWEILRFLLSNIRWWLEEYRF 310
Query: 442 DGFRFD-LASVL 452
DGFRFD + S+L
Sbjct: 311 DGFRFDGVTSML 322
Score = 46 (21.3 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 628 MGDEYGHT------RYGNNNSY 643
MG+E+GH R GNN SY
Sbjct: 498 MGNEFGHPEWLDFPRKGNNESY 519
>TAIR|locus:2144608 [details] [associations]
symbol:SBE2.2 "starch branching enzyme 2.2" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0043169 "cation binding"
evidence=IEA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0003844 "1,4-alpha-glucan branching enzyme activity"
evidence=ISS;IDA] [GO:0005982 "starch metabolic process"
evidence=RCA;IMP] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019760 "glucosinolate metabolic process"
evidence=RCA] [GO:0043085 "positive regulation of catalytic
activity" evidence=RCA] [GO:0010021 "amylopectin biosynthetic
process" evidence=TAS] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 UniPathway:UPA00152 InterPro:IPR013780
EMBL:CP002688 GO:GO:0009570 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0071333 GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853
SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180 PANTHER:PTHR10357
GO:GO:0004553 CAZy:CBM48 GO:GO:0005978 InterPro:IPR014756
SUPFAM:SSF81296 GO:GO:0071329 EMBL:AL162506 GO:GO:0003844
GO:GO:0071482 GO:GO:0009501 GO:GO:0005982 UniGene:At.24317
HSSP:P07762 eggNOG:COG0296 HOGENOM:HOG000175159 KO:K00700
ProtClustDB:PLN02447 GO:GO:0010021 GO:GO:0071332 GO:GO:0019252
EMBL:AJ005130 EMBL:U22428 EMBL:AK117729 IPI:IPI00518558 PIR:S65046
PIR:T48392 RefSeq:NP_195985.3 UniGene:At.4765
ProteinModelPortal:Q9LZS3 SMR:Q9LZS3 STRING:Q9LZS3 PRIDE:Q9LZS3
EnsemblPlants:AT5G03650.1 GeneID:831769 KEGG:ath:AT5G03650
TAIR:At5g03650 InParanoid:Q9LZS3 OMA:NDANWIE PhylomeDB:Q9LZS3
Genevestigator:Q9LZS3 Uniprot:Q9LZS3
Length = 805
Score = 129 (50.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 39/125 (31%), Positives = 58/125 (46%)
Query: 325 TWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHT--NEADD 382
++GY NFF+P SR G P E K ++ H G+ V++D+V++H N D
Sbjct: 342 SFGYHVTNFFAPSSRC----GTPE----ELKSLIDRAHELGLVVLMDIVHSHASKNTLDG 393
Query: 383 ANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVD 442
N F G D +Y G + ++ N V+ +L + R W+ EY D
Sbjct: 394 LN----MFDGTD--AHYFHSGP-RGYHWMWDSRLFNYGSWEVLRYLLSNARWWLEEYKFD 446
Query: 443 GFRFD 447
GFRFD
Sbjct: 447 GFRFD 451
Score = 58 (25.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 27/93 (29%), Positives = 42/93 (45%)
Query: 248 PNIPEKDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKI-PHLLELGINAVELLPVFE 306
P P K L IYE +V G S+ +P + +Y + P + +LG NAV+++ + E
Sbjct: 285 PKRP-KSLRIYEAHV----GMSST--EPMVN-TYANFRDDVLPRIKKLGYNAVQIMAIQE 336
Query: 307 FDEMEFQRRRNPRDHMVNTWGYSTINFFSPMSR 339
++GY NFF+P SR
Sbjct: 337 HSYYA-------------SFGYHVTNFFAPSSR 356
>UNIPROTKB|Q04446 [details] [associations]
symbol:GBE1 "1,4-alpha-glucan-branching enzyme"
species:9606 "Homo sapiens" [GO:0004553 "hydrolase activity,
hydrolyzing O-glycosyl compounds" evidence=IEA] [GO:0043169 "cation
binding" evidence=IEA] [GO:0003844 "1,4-alpha-glucan branching
enzyme activity" evidence=IEA] [GO:0005978 "glycogen biosynthetic
process" evidence=IEA;TAS] [GO:0005977 "glycogen metabolic process"
evidence=TAS] [GO:0006091 "generation of precursor metabolites and
energy" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0006006 "glucose metabolic process" evidence=TAS] [GO:0044281
"small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 UniPathway:UPA00164 InterPro:IPR013780
GO:GO:0005829 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0044281
GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
CAZy:GH13 Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553
CAZy:CBM48 GO:GO:0005978 GO:GO:0006006 InterPro:IPR014756
SUPFAM:SSF81296 GO:GO:0003844 eggNOG:COG0296 KO:K00700 EMBL:L07956
EMBL:AK125918 EMBL:AC017015 EMBL:AC025029 EMBL:AC099049
EMBL:BC012098 IPI:IPI00296635 PIR:A46075 RefSeq:NP_000149.3
UniGene:Hs.436062 ProteinModelPortal:Q04446 SMR:Q04446
IntAct:Q04446 MINT:MINT-1415803 STRING:Q04446 PhosphoSite:Q04446
DMDM:67465046 PaxDb:Q04446 PRIDE:Q04446 DNASU:2632
Ensembl:ENST00000429644 GeneID:2632 KEGG:hsa:2632 UCSC:uc021xav.1
CTD:2632 GeneCards:GC03M081621 HGNC:HGNC:4180 HPA:HPA038073
HPA:HPA038074 HPA:HPA038075 MIM:232500 MIM:263570 MIM:607839
neXtProt:NX_Q04446 Orphanet:206583 Orphanet:367 PharmGKB:PA28594
HOVERGEN:HBG051734 InParanoid:Q04446 OrthoDB:EOG4F1X2K
BioCyc:MetaCyc:HS03772-MONOMER ChiTaRS:GBE1 GenomeRNAi:2632
NextBio:10376 ArrayExpress:Q04446 Bgee:Q04446 CleanEx:HS_GBE1
Genevestigator:Q04446 GermOnline:ENSG00000114480 Uniprot:Q04446
Length = 702
Score = 139 (54.0 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 44/132 (33%), Positives = 66/132 (50%)
Query: 325 TWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHT--NEADD 382
++GY +FF+ SRY G P E +E+V H GI V+LDVV++H N AD
Sbjct: 248 SFGYQITSFFAASSRY----GTPE----ELQELVDTAHSMGIIVLLDVVHSHASKNSADG 299
Query: 383 ANPYTTSFRGIDNKVYYMVD-GTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHV 441
N F G D+ ++ GT L + + ++ +L ++R W+ EY
Sbjct: 300 LN----MFDGTDSCYFHSGPRGTHDLWD----SRLFAYSSWEILRFLLSNIRWWLEEYRF 351
Query: 442 DGFRFD-LASVL 452
DGFRFD + S+L
Sbjct: 352 DGFRFDGVTSML 363
Score = 46 (21.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 628 MGDEYGHT------RYGNNNSY 643
MG+E+GH R GNN SY
Sbjct: 539 MGNEFGHPEWLDFPRKGNNESY 560
>FB|FBgn0053138 [details] [associations]
symbol:AGBE "1,4-Alpha-Glucan Branching Enzyme" species:7227
"Drosophila melanogaster" [GO:0003844 "1,4-alpha-glucan branching
enzyme activity" evidence=ISS] [GO:0005978 "glycogen biosynthetic
process" evidence=IEA] [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0043169 "cation binding"
evidence=IEA] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 InterPro:IPR013780 EMBL:AE013599
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553 CAZy:CBM48
GO:GO:0005978 InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0003844
eggNOG:COG0296 KO:K00700 OMA:EIDPYLK GeneTree:ENSGT00390000017040
RefSeq:NP_788342.1 UniGene:Dm.593 ProteinModelPortal:A1Z992
SMR:A1Z992 IntAct:A1Z992 STRING:A1Z992 PaxDb:A1Z992 PRIDE:A1Z992
EnsemblMetazoa:FBtr0087732 EnsemblMetazoa:FBtr0310496 GeneID:326264
KEGG:dme:Dmel_CG33138 UCSC:CG33138-RA FlyBase:FBgn0053138
InParanoid:A1Z992 OrthoDB:EOG4CNP63 PhylomeDB:A1Z992
GenomeRNAi:326264 NextBio:847913 Bgee:A1Z992 Uniprot:A1Z992
Length = 685
Score = 124 (48.7 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 38/130 (29%), Positives = 65/130 (50%)
Query: 325 TWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDAN 384
++GY +F++ SRY G P + K M+ H G+ V+LDVV++H ++ +
Sbjct: 233 SFGYQVTSFYAASSRY----GNPE----QLKRMIDVAHSHGLFVLLDVVHSHASK--NVQ 282
Query: 385 PYTTSFRGIDNKVYYMVDGT-GQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDG 443
F G ++ ++ DG G+ + N V+ +L +LR W EY+ DG
Sbjct: 283 DGLNQFDGTNSCFFH--DGARGE--HSLWDSRLFNYVEYEVLRFLLSNLRWWHDEYNFDG 338
Query: 444 FRFD-LASVL 452
+RFD + S+L
Sbjct: 339 YRFDGVTSML 348
Score = 54 (24.1 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 26/106 (24%), Positives = 46/106 (43%)
Query: 628 MGDEYGHT------RYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIK-FRQSRRV 680
MG+E+GH R GNN+SY + QW ++ Y++ +E + ++
Sbjct: 524 MGNEFGHPEWLDFPRVGNNDSYHYARR----QWNLVDDDLLK-YKYLNEFDRAMNEAEER 578
Query: 681 FGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIYLAFNAH 726
+G +L+ + W +W + K +AF A + FN H
Sbjct: 579 YG---WLH-SGPAWV--SWKHEGDKIIAF-----ERAGLVFVFNFH 613
Score = 49 (22.3 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 248 PNIPE-KDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKI-PHLLELGINAVELLPVF 305
P P K L IYE +V G S +P + GSY +I P + G N ++++ +
Sbjct: 174 PGPPRPKSLRIYECHV----GIASQ--EPRV-GSYDEFADRIVPRIKRQGYNCIQVMAIM 226
Query: 306 E 306
E
Sbjct: 227 E 227
>UNIPROTKB|Q01401 [details] [associations]
symbol:SBE1 "1,4-alpha-glucan-branching enzyme,
chloroplastic/amyloplastic" species:39947 "Oryza sativa Japonica
Group" [GO:0003844 "1,4-alpha-glucan branching enzyme activity"
evidence=ISS] [GO:0005982 "starch metabolic process" evidence=ISS]
[GO:0009501 "amyloplast" evidence=ISS] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 UniPathway:UPA00152
InterPro:IPR013780 GO:GO:0009507 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GO:GO:0004553 CAZy:CBM48 GO:GO:0005978
InterPro:IPR014756 SUPFAM:SSF81296 GO:GO:0003844 EMBL:AP003685
EMBL:AP004685 GO:GO:0009501 GO:GO:0005982 eggNOG:COG0296 KO:K00700
ProtClustDB:PLN02447 GO:GO:0019252 EMBL:D10752 EMBL:D10838
EMBL:D11082 EMBL:AY302112 EMBL:AF136268 EMBL:AK068920 PIR:JX0243
RefSeq:NP_001058629.1 UniGene:Os.22169 PDB:3AMK PDB:3AML
PDBsum:3AMK PDBsum:3AML ProteinModelPortal:Q01401 STRING:Q01401
EnsemblPlants:LOC_Os06g51084.1 GeneID:4342117 KEGG:osa:4342117
Gramene:Q01401 OMA:HFITMAL EvolutionaryTrace:Q01401 Uniprot:Q01401
Length = 820
Score = 129 (50.5 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 48/183 (26%), Positives = 82/183 (44%)
Query: 275 PEIRGSYLGLIQKIPHLLELGINAVELLPVFEFDEMEFQRRRNPRDHMVN-TWGYSTINF 333
P I +++G+ + P + A +LP + + +H ++GY NF
Sbjct: 246 PRIYEAHVGMSGEEPEVSTYREFADNVLPRIRANNYNTVQLMAIMEHSYYASFGYHVTNF 305
Query: 334 FSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHT--NEADDANPYTTSFR 391
F+ SR G P + K +V H G+ V++DVV++H N D N Y +
Sbjct: 306 FAVSSR----SGTPE----DLKYLVDKAHSLGLRVLMDVVHSHASNNVTDGLNGYDVG-Q 356
Query: 392 GIDNKVYYMVD-GTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFD-LA 449
++ D G +L + N + V+ +L +LR+W+ E+ DGFRFD +
Sbjct: 357 NTHESYFHTGDRGYHKLWD----SRLFNYANWEVLRFLLSNLRYWMDEFMFDGFRFDGVT 412
Query: 450 SVL 452
S+L
Sbjct: 413 SML 415
Score = 53 (23.7 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 32/123 (26%), Positives = 49/123 (39%)
Query: 611 KNFHLALMVSQGTPMM-LMGDEYGHT------RYGNNNSYGHDTAINNFQWGQLETKKNS 663
K H M G + MG+E+GH R GNN SY D QW ++T +
Sbjct: 573 KMIHFITMALGGDGYLNFMGNEFGHPEWIDFPREGNNWSY--DKCRR--QWSLVDTD-HL 627
Query: 664 HYRFFSEVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIYLAF 723
Y++ + F Q+ E+F ++ + + D K + F G D+ F
Sbjct: 628 RYKYMNA---FDQAMNAL-EEEFSFLSSSKQIVSDMNEKD-KVIVF----ERG-DLVFVF 677
Query: 724 NAH 726
N H
Sbjct: 678 NFH 680
>UNIPROTKB|F1MZP0 [details] [associations]
symbol:GBE1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043169 "cation binding" evidence=IEA] [GO:0005978
"glycogen biosynthetic process" evidence=IEA] [GO:0004553
"hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0003844 "1,4-alpha-glucan branching enzyme
activity" evidence=IEA] InterPro:IPR004193 InterPro:IPR006047
InterPro:IPR006048 InterPro:IPR006407 InterPro:IPR013781
InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806 Pfam:PF02922
PIRSF:PIRSF000463 InterPro:IPR013780 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GO:GO:0004553 GO:GO:0005978 InterPro:IPR014756
SUPFAM:SSF81296 GO:GO:0003844 OMA:EIDPYLK
GeneTree:ENSGT00390000017040 EMBL:DAAA02000685 EMBL:DAAA02000686
EMBL:DAAA02000687 EMBL:DAAA02000688 EMBL:DAAA02000689
EMBL:DAAA02000690 EMBL:DAAA02000691 EMBL:DAAA02000692
IPI:IPI01027954 Ensembl:ENSBTAT00000050765 Uniprot:F1MZP0
Length = 655
Score = 133 (51.9 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 45/132 (34%), Positives = 64/132 (48%)
Query: 325 TWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHT--NEADD 382
++GY +FF+ SRY G P E KE+V H GI V+LDVV++H N D
Sbjct: 201 SFGYQITSFFAASSRY----GTPE----ELKELVDTAHSMGITVLLDVVHSHASKNSEDG 252
Query: 383 ANPYTTSFRGIDNKVY-YMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHV 441
N F G ++ + Y GT L + V+ +L ++R W+ EY
Sbjct: 253 LN----MFDGTESCYFHYGPRGTHLLWD----SRLFAYASWEVLRFLLSNIRWWLEEYGF 304
Query: 442 DGFRFD-LASVL 452
DGFRFD + S+L
Sbjct: 305 DGFRFDGVTSML 316
Score = 46 (21.3 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 628 MGDEYGHT------RYGNNNSY 643
MG+E+GH R GNN SY
Sbjct: 492 MGNEFGHPEWLDFPRKGNNESY 513
>SGD|S000000737 [details] [associations]
symbol:GLC3 "Glycogen branching enzyme, involved in glycogen
accumulation" species:4932 "Saccharomyces cerevisiae" [GO:0005978
"glycogen biosynthetic process" evidence=IEA;IMP] [GO:0043169
"cation binding" evidence=IEA] [GO:0003844 "1,4-alpha-glucan
branching enzyme activity" evidence=IEA;IGI;IMP] [GO:0004553
"hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016757 "transferase activity, transferring glycosyl groups"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] InterPro:IPR004193
InterPro:IPR006047 InterPro:IPR006048 InterPro:IPR006407
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 Pfam:PF02806
Pfam:PF02922 PIRSF:PIRSF000463 UniPathway:UPA00164 SGD:S000000737
InterPro:IPR013780 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GO:GO:0004553 CAZy:CBM48 GO:GO:0005978
EMBL:BK006939 InterPro:IPR014756 SUPFAM:SSF81296 EMBL:U18530
GO:GO:0003844 eggNOG:COG0296 HOGENOM:HOG000175159 KO:K00700
OrthoDB:EOG47M562 GeneTree:ENSGT00390000017040 EMBL:M76739
PIR:S50448 RefSeq:NP_010905.1 ProteinModelPortal:P32775 SMR:P32775
DIP:DIP-3873N IntAct:P32775 MINT:MINT-573503 STRING:P32775
PaxDb:P32775 PeptideAtlas:P32775 EnsemblFungi:YEL011W GeneID:856705
KEGG:sce:YEL011W CYGD:YEL011w OMA:ALYWFKE NextBio:982774
Genevestigator:P32775 GermOnline:YEL011W Uniprot:P32775
Length = 704
Score = 131 (51.2 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 40/130 (30%), Positives = 64/130 (49%)
Query: 325 TWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDAN 384
++GY NFF+ SR+ G P E KE++ H GI V+LDVV++H ++ +
Sbjct: 245 SFGYQVTNFFAASSRF----GTPE----ELKELIDTAHSMGILVLLDVVHSHASK--NVE 294
Query: 385 PYTTSFRGIDNKVYYMVD-GTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDG 443
F G D++ ++ + G G+ + N V +L +L +V Y DG
Sbjct: 295 DGLNMFDGSDHQYFHSISSGRGE--HPLWDSRLFNYGKFEVQRFLLANLAFYVDVYQFDG 352
Query: 444 FRFD-LASVL 452
FRFD + S+L
Sbjct: 353 FRFDGVTSML 362
>TIGR_CMR|BA_4231 [details] [associations]
symbol:BA_4231 "oligo-1,6-glucosidase" species:198094
"Bacillus anthracis str. Ames" [GO:0004574 "oligo-1,6-glucosidase
activity" evidence=ISS] [GO:0009311 "oligosaccharide metabolic
process" evidence=ISS] InterPro:IPR006047 InterPro:IPR006589
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 SMART:SM00642
InterPro:IPR013780 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 GO:GO:0005975
Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004574
HOGENOM:HOG000220641 HSSP:P21332 OMA:DVYEMMK RefSeq:NP_846466.1
RefSeq:YP_020873.1 RefSeq:YP_030174.1 ProteinModelPortal:Q81ML6
SMR:Q81ML6 DNASU:1089023 EnsemblBacteria:EBBACT00000010585
EnsemblBacteria:EBBACT00000014290 EnsemblBacteria:EBBACT00000020178
GeneID:1089023 GeneID:2818230 GeneID:2850895 KEGG:ban:BA_4231
KEGG:bar:GBAA_4231 KEGG:bat:BAS3924 KO:K01182
ProtClustDB:CLSK873454 BioCyc:BANT260799:GJAJ-3981-MONOMER
BioCyc:BANT261594:GJ7F-4115-MONOMER Uniprot:Q81ML6
Length = 558
Score = 85 (35.0 bits), Expect = 9.3e-05, Sum P(4) = 9.3e-05
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 253 KDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKIPHLLELGINAVELLPVFE 306
K+ V+Y++ R+F G+ G G+I K+ +L ELGI+ + L PV+E
Sbjct: 7 KESVVYQIYPRSFMDSNGDGI-----GDLRGIISKLDYLKELGIDVIWLSPVYE 55
Score = 69 (29.3 bits), Expect = 9.3e-05, Sum P(4) = 9.3e-05
Identities = 15/50 (30%), Positives = 31/50 (62%)
Query: 353 EFKEMVKALHGAGIEVILDVVYNHTNEADDANPYTTSFRGIDNKV--YYM 400
++ E++ +H +++++D+V NHT+ D+ N + S + DNK YY+
Sbjct: 80 DWDELLHEMHERNMKLMMDLVVNHTS--DEHNWFIESRKSKDNKYRDYYI 127
Score = 53 (23.7 bits), Expect = 9.3e-05, Sum P(4) = 9.3e-05
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 417 LNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSP 460
LN ++ V + + ++ W+ E +DGFR D+ + + + +G P
Sbjct: 170 LNWDNEKVRQDVYGMMKFWL-EKGIDGFRMDVINFISK-EEGLP 211
Score = 52 (23.4 bits), Expect = 9.3e-05, Sum P(4) = 9.3e-05
Identities = 19/76 (25%), Positives = 33/76 (43%)
Query: 606 RSRQMKNFHLALMVSQGTPMMLMGDEYGHT--RYGNNNSYGHDTAINNFQWGQLETKKNS 663
R K L + +GTP + G+E G T R+ + + Y +N ++ +E ++
Sbjct: 344 RIESAKMLATVLHMMKGTPYIYQGEEIGMTNVRFESIDEYRDIETLNMYKEKVMERGEDI 403
Query: 664 HYRFFSEVIKFRQSRR 679
S IK R + R
Sbjct: 404 EKVMQSIYIKGRDNAR 419
>UNIPROTKB|O07176 [details] [associations]
symbol:treS "Trehalose synthase/amylase TreS" species:1773
"Mycobacterium tuberculosis" [GO:0000023 "maltose metabolic
process" evidence=ISS] [GO:0004556 "alpha-amylase activity"
evidence=ISS] [GO:0005509 "calcium ion binding" evidence=ISS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005977 "glycogen metabolic process"
evidence=ISS] [GO:0005978 "glycogen biosynthetic process"
evidence=IMP] [GO:0005991 "trehalose metabolic process"
evidence=ISS] [GO:0005992 "trehalose biosynthetic process"
evidence=IMP;TAS] [GO:0016161 "beta-amylase activity" evidence=IDA]
[GO:0047471 "maltose alpha-D-glucosyltransferase activity"
evidence=IDA] InterPro:IPR006047 InterPro:IPR006589
InterPro:IPR012810 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF00128 SMART:SM00642 UniPathway:UPA00164 InterPro:IPR013780
GO:GO:0005829 GO:GO:0005886 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR Gene3D:3.20.20.80 InterPro:IPR017853
SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180 PANTHER:PTHR10357
GO:GO:0000272 GO:GO:0005509 EMBL:BX842572 GO:GO:0005978
GO:GO:0004556 Reactome:REACT_27295 GO:GO:0016161 GO:GO:0005992
GO:GO:0000023 InterPro:IPR022567 Pfam:PF11941 HOGENOM:HOG000220639
KO:K05343 OMA:HEWFQQS ProtClustDB:CLSK871760 GO:GO:0047471
TIGRFAMs:TIGR02456 PIR:G70983 RefSeq:NP_214640.1 RefSeq:NP_334544.1
RefSeq:YP_006513445.1 HSSP:Q8KR84 ProteinModelPortal:O07176
SMR:O07176 PRIDE:O07176 EnsemblBacteria:EBMYCT00000003283
EnsemblBacteria:EBMYCT00000071099 GeneID:13316109 GeneID:886881
GeneID:922997 KEGG:mtc:MT0134 KEGG:mtu:Rv0126 KEGG:mtv:RVBD_0126
PATRIC:18122020 TubercuList:Rv0126 Uniprot:O07176
Length = 601
Score = 77 (32.2 bits), Expect = 0.00012, Sum P(4) = 0.00012
Identities = 24/69 (34%), Positives = 34/69 (49%)
Query: 240 DWGDNYKLPNIPE--KDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKIPHLLELGIN 297
D+G LP P K V YE+ VRAF + G G GLI ++ +L LGI+
Sbjct: 30 DFGSAAALPADPTWFKHAVFYEVLVRAFFDASADG-----SGDLRGLIDRLDYLQWLGID 84
Query: 298 AVELLPVFE 306
+ L P ++
Sbjct: 85 CIWLPPFYD 93
Score = 70 (29.7 bits), Expect = 0.00012, Sum P(4) = 0.00012
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 353 EFKEMVKALHGAGIEVILDVVYNHTNEA 380
+F +V A H GI +I D+V NHT+E+
Sbjct: 118 DFVALVDAAHRRGIRIITDLVMNHTSES 145
Score = 69 (29.3 bits), Expect = 0.00012, Sum P(4) = 0.00012
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 417 LNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVL 452
LN ++P V E ++D +R W+ +DGFR D L
Sbjct: 209 LNYDNPAVQEAMIDVIRFWL-GLGIDGFRLDAVPYL 243
Score = 44 (20.5 bits), Expect = 0.00012, Sum P(4) = 0.00012
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 609 QMKNFHLALMVSQGTPMMLMGDEYG 633
Q++ F L+ G+P++ GDE G
Sbjct: 395 QIELFTALLLSLPGSPVLYYGDEIG 419
>UNIPROTKB|A0R6E0 [details] [associations]
symbol:treS "Trehalose synthase/amylase TreS"
species:246196 "Mycobacterium smegmatis str. MC2 155" [GO:0000023
"maltose metabolic process" evidence=IDA] [GO:0004556
"alpha-amylase activity" evidence=IDA] [GO:0005509 "calcium ion
binding" evidence=IDA] [GO:0005977 "glycogen metabolic process"
evidence=IDA] [GO:0005991 "trehalose metabolic process"
evidence=IDA] [GO:0047471 "maltose alpha-D-glucosyltransferase
activity" evidence=IDA] InterPro:IPR006047 InterPro:IPR006589
InterPro:IPR012810 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF00128 SMART:SM00642 UniPathway:UPA00164 InterPro:IPR013780
EMBL:CP000480 EMBL:CP001663 GenomeReviews:CP000480_GR
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13
eggNOG:COG0366 Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0000272
GO:GO:0005509 GO:GO:0005977 GO:GO:0005978 GO:GO:0004556
GO:GO:0000023 GO:GO:0005991 RefSeq:YP_006571064.1
RefSeq:YP_890728.1 ProteinModelPortal:A0R6E0 STRING:A0R6E0
EnsemblBacteria:EBMYCT00000041419 GeneID:13425467 GeneID:4533171
KEGG:msg:MSMEI_6343 KEGG:msm:MSMEG_6515 PATRIC:18085253
HOGENOM:HOG000220639 KO:K05343 OMA:HEWFQQS ProtClustDB:CLSK871760
BioCyc:MSME246196:GJ4Y-6514-MONOMER GO:GO:0047471
TIGRFAMs:TIGR02456 Uniprot:A0R6E0
Length = 593
Score = 80 (33.2 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 27/85 (31%), Positives = 38/85 (44%)
Query: 417 LNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAIL 476
LN ++P V E +LD LR W+ + +DGFR D L + N P A L
Sbjct: 201 LNYDNPAVQEAMLDVLRFWL-DLGIDGFRLDAVPYLFEREGTNCENLPET------HAFL 253
Query: 477 SRC-KIIAEPWDCRGLYLVGKFPNW 500
RC K I + + G L+ + W
Sbjct: 254 KRCRKAIDDEYP--GRVLLAEANQW 276
Score = 71 (30.1 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 240 DWGDNYKLPNIPE--KDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKIPHLLELGIN 297
D+G LP K V YE+ VRAF + G+ G GL +K+ ++ LG++
Sbjct: 22 DFGHARTLPTDTNWFKHAVFYEVLVRAFYDSNADGI-----GDLRGLTEKLDYIKWLGVD 76
Query: 298 AVELLPVFE 306
+ L P ++
Sbjct: 77 CLWLPPFYD 85
Score = 63 (27.2 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 353 EFKEMVKALHGAGIEVILDVVYNHTNE 379
+F ++ A H GI +I D+V NHT++
Sbjct: 110 DFVTLLDAAHRRGIRIITDLVMNHTSD 136
Score = 44 (20.5 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 609 QMKNFHLALMVSQGTPMMLMGDEYG 633
Q++ F L+ G+P++ GDE G
Sbjct: 387 QIELFTALLLSLPGSPVLYYGDEIG 411
>UNIPROTKB|Q10625 [details] [associations]
symbol:glgB "1,4-alpha-glucan branching enzyme GlgB"
species:1773 "Mycobacterium tuberculosis" [GO:0003844
"1,4-alpha-glucan branching enzyme activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005978 "glycogen biosynthetic process"
evidence=IMP] [GO:0009250 "glucan biosynthetic process"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] HAMAP:MF_00685
InterPro:IPR004193 InterPro:IPR006047 InterPro:IPR006048
InterPro:IPR006407 InterPro:IPR013781 InterPro:IPR015902
Pfam:PF00128 Pfam:PF02806 Pfam:PF02922 PIRSF:PIRSF000463
UniPathway:UPA00164 UniPathway:UPA00934 InterPro:IPR013780
GO:GO:0005886 GO:GO:0040007 Gene3D:2.60.40.10 InterPro:IPR013783
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
CAZy:GH13 Gene3D:2.60.40.1180 PANTHER:PTHR10357 GO:GO:0004553
EMBL:BX842576 CAZy:CBM48 GO:GO:0005978 InterPro:IPR014756
SUPFAM:SSF81296 GO:GO:0045227 GO:GO:0003844 BRENDA:2.4.1.18
eggNOG:COG0296 KO:K00700 HOGENOM:HOG000283037 OMA:YSREDGQ
ProtClustDB:PRK05402 PANTHER:PTHR10357:SF13 TIGRFAMs:TIGR01515
PIR:B70770 RefSeq:NP_215842.1 RefSeq:NP_335818.1
RefSeq:YP_006514704.1 PDB:3K1D PDBsum:3K1D
ProteinModelPortal:Q10625 SMR:Q10625 PRIDE:Q10625
EnsemblBacteria:EBMYCT00000003773 EnsemblBacteria:EBMYCT00000071870
GeneID:13319912 GeneID:886893 GeneID:924686 KEGG:mtc:MT1368
KEGG:mtu:Rv1326c KEGG:mtv:RVBD_1326c PATRIC:18124782
TubercuList:Rv1326c EvolutionaryTrace:Q10625 Uniprot:Q10625
Length = 731
Score = 121 (47.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 42/136 (30%), Positives = 68/136 (50%)
Query: 320 DH-MVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTN 378
+H +WGY ++++P SR+ G P +F+ +V ALH AGI VI+D V H
Sbjct: 297 EHPFAGSWGYQVTSYYAPTSRF----GTPD----DFRALVDALHQAGIGVIVDWVPAHFP 348
Query: 379 EADDANPYTTSFRGIDNKVYYMVDGT-GQLLNYAGCGNTLNCNHPVVMELILDSLRHWVV 437
+ DA F G +Y D G+ L++ + P V ++ + +W+
Sbjct: 349 K--DAWALGR-FDG--TPLYEHSDPKRGEQLDWGTY--VFDFGRPEVRNFLVANALYWLQ 401
Query: 438 EYHVDGFRFD-LASVL 452
E+H+DG R D +AS+L
Sbjct: 402 EFHIDGLRVDAVASML 417
Score = 56 (24.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 22/72 (30%), Positives = 36/72 (50%)
Query: 117 VENGINFAIFSQHATAVTLCLSLPKREKLDWQDGGMIELPLDPRVNKTGDIWHICIEDLP 176
V +G++FA+++ +A V+L E W +G E P+ RV +W + D P
Sbjct: 143 VVSGVSFAVWAPNAKGVSLI-----GEFNGW-NGH--EAPM--RVLGPSGVWELFWPDFP 192
Query: 177 RSEVLYGYRVDG 188
+ LY +RV G
Sbjct: 193 -CDGLYKFRVHG 203
>UNIPROTKB|Q9KTJ1 [details] [associations]
symbol:VC0911 "Trehalose-6-phosphate hydrolase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0005993 "trehalose catabolic process" evidence=ISS] [GO:0008788
"alpha,alpha-phosphotrehalase activity" evidence=ISS]
InterPro:IPR006047 InterPro:IPR006589 InterPro:IPR012769
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 SMART:SM00642
InterPro:IPR013780 GO:GO:0005737 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GenomeReviews:AE003852_GR GO:GO:0005993
OMA:VRNIEIM HSSP:P21332 KO:K01226 GO:GO:0008788 TIGRFAMs:TIGR02403
EMBL:AE004175 PIR:C82263 RefSeq:NP_230558.1
ProteinModelPortal:Q9KTJ1 DNASU:2614202 GeneID:2614202
KEGG:vch:VC0911 PATRIC:20080920 ProtClustDB:CLSK874149
Uniprot:Q9KTJ1
Length = 562
Score = 71 (30.1 bits), Expect = 0.00057, Sum P(4) = 0.00057
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 253 KDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKIPHLLELGINAVELLPVFE 306
K IY++ ++F + G+ G G+I K+ +L +LGI A+ L P+++
Sbjct: 12 KTAAIYQIYPKSFCDSGAKGV-----GDLQGIISKLDYLQKLGIEAIWLTPIYQ 60
Score = 70 (29.7 bits), Expect = 0.00057, Sum P(4) = 0.00057
Identities = 10/26 (38%), Positives = 20/26 (76%)
Query: 353 EFKEMVKALHGAGIEVILDVVYNHTN 378
+F++++K H G+ +I+D+V NHT+
Sbjct: 85 DFEQLLKEAHRRGMRIIMDIVVNHTS 110
Score = 62 (26.9 bits), Expect = 0.00057, Sum P(4) = 0.00057
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 417 LNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTD 457
LN +P V E + + + W E VDGFR D+ +++ + D
Sbjct: 175 LNWENPQVREEVKNIIGFWA-EKGVDGFRLDVINLISKQQD 214
Score = 49 (22.3 bits), Expect = 0.00057, Sum P(4) = 0.00057
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 598 DDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYG 638
DD + + S +M + LM QGTP + G+E G T G
Sbjct: 339 DDQQYR-VESAKMLAATIHLM--QGTPYIYQGEEIGMTNPG 376
>TIGR_CMR|VC_0911 [details] [associations]
symbol:VC_0911 "trehalose-6-phosphate hydrolase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0005993
"trehalose catabolic process" evidence=ISS] [GO:0008788
"alpha,alpha-phosphotrehalase activity" evidence=ISS]
InterPro:IPR006047 InterPro:IPR006589 InterPro:IPR012769
InterPro:IPR013781 InterPro:IPR015902 Pfam:PF00128 SMART:SM00642
InterPro:IPR013780 GO:GO:0005737 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 CAZy:GH13 Gene3D:2.60.40.1180
PANTHER:PTHR10357 GenomeReviews:AE003852_GR GO:GO:0005993
OMA:VRNIEIM HSSP:P21332 KO:K01226 GO:GO:0008788 TIGRFAMs:TIGR02403
EMBL:AE004175 PIR:C82263 RefSeq:NP_230558.1
ProteinModelPortal:Q9KTJ1 DNASU:2614202 GeneID:2614202
KEGG:vch:VC0911 PATRIC:20080920 ProtClustDB:CLSK874149
Uniprot:Q9KTJ1
Length = 562
Score = 71 (30.1 bits), Expect = 0.00057, Sum P(4) = 0.00057
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 253 KDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKIPHLLELGINAVELLPVFE 306
K IY++ ++F + G+ G G+I K+ +L +LGI A+ L P+++
Sbjct: 12 KTAAIYQIYPKSFCDSGAKGV-----GDLQGIISKLDYLQKLGIEAIWLTPIYQ 60
Score = 70 (29.7 bits), Expect = 0.00057, Sum P(4) = 0.00057
Identities = 10/26 (38%), Positives = 20/26 (76%)
Query: 353 EFKEMVKALHGAGIEVILDVVYNHTN 378
+F++++K H G+ +I+D+V NHT+
Sbjct: 85 DFEQLLKEAHRRGMRIIMDIVVNHTS 110
Score = 62 (26.9 bits), Expect = 0.00057, Sum P(4) = 0.00057
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 417 LNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTD 457
LN +P V E + + + W E VDGFR D+ +++ + D
Sbjct: 175 LNWENPQVREEVKNIIGFWA-EKGVDGFRLDVINLISKQQD 214
Score = 49 (22.3 bits), Expect = 0.00057, Sum P(4) = 0.00057
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 598 DDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYG 638
DD + + S +M + LM QGTP + G+E G T G
Sbjct: 339 DDQQYR-VESAKMLAATIHLM--QGTPYIYQGEEIGMTNPG 376
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.430 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 782 767 0.00092 121 3 11 22 0.39 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 44
No. of states in DFA: 633 (67 KB)
Total size of DFA: 453 KB (2212 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 64.68u 0.18s 64.86t Elapsed: 00:00:03
Total cpu time: 64.70u 0.18s 64.88t Elapsed: 00:00:03
Start: Fri May 10 13:09:57 2013 End: Fri May 10 13:10:00 2013