Query 003978
Match_columns 782
No_of_seqs 519 out of 3703
Neff 7.6
Searched_HMMs 46136
Date Thu Mar 28 15:22:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003978.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003978hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0581 Mitogen-activated prot 100.0 1.5E-49 3.3E-54 416.2 27.2 260 500-772 74-343 (364)
2 KOG0575 Polo-like serine/threo 100.0 3.6E-48 7.7E-53 426.7 24.6 254 505-769 18-274 (592)
3 KOG0192 Tyrosine kinase specif 100.0 1.4E-47 3E-52 419.2 28.5 275 498-773 34-314 (362)
4 KOG0598 Ribosomal protein S6 k 100.0 4.5E-48 9.8E-53 405.0 22.4 258 503-770 23-287 (357)
5 KOG0615 Serine/threonine prote 100.0 1.1E-48 2.3E-53 411.8 15.5 260 502-771 169-444 (475)
6 KOG0595 Serine/threonine-prote 100.0 1.2E-46 2.7E-51 397.1 23.7 258 504-771 9-275 (429)
7 KOG0591 NIMA (never in mitosis 100.0 1.7E-47 3.6E-52 384.8 12.0 256 502-758 16-281 (375)
8 KOG0592 3-phosphoinositide-dep 100.0 2.2E-45 4.8E-50 398.1 24.0 257 502-769 70-343 (604)
9 KOG0593 Predicted protein kina 100.0 7.4E-46 1.6E-50 376.3 16.5 254 505-767 2-287 (396)
10 KOG0616 cAMP-dependent protein 100.0 1.9E-45 4.2E-50 372.9 18.7 254 502-769 41-302 (355)
11 KOG0583 Serine/threonine prote 100.0 1.8E-44 4E-49 397.7 27.2 257 502-769 14-280 (370)
12 KOG0597 Serine-threonine prote 100.0 2.6E-45 5.5E-50 396.9 17.1 256 505-772 2-259 (808)
13 KOG0198 MEKK and related serin 100.0 1.7E-44 3.7E-49 384.1 20.4 257 505-771 17-283 (313)
14 KOG0694 Serine/threonine prote 100.0 1.6E-43 3.5E-48 393.8 26.6 259 501-771 364-631 (694)
15 KOG0197 Tyrosine kinases [Sign 100.0 4.4E-44 9.6E-49 391.0 20.9 262 497-764 198-463 (468)
16 KOG0582 Ste20-like serine/thre 100.0 2.1E-43 4.5E-48 375.0 25.2 264 499-773 20-302 (516)
17 KOG0588 Serine/threonine prote 100.0 3.5E-44 7.5E-49 395.7 19.6 256 505-772 12-271 (786)
18 KOG0659 Cdk activating kinase 100.0 2.5E-43 5.5E-48 352.9 20.2 262 505-775 2-292 (318)
19 KOG0605 NDR and related serine 100.0 1.7E-43 3.6E-48 384.2 20.4 258 503-770 139-451 (550)
20 KOG0610 Putative serine/threon 100.0 8.5E-43 1.9E-47 367.9 25.0 264 500-771 72-399 (459)
21 KOG0578 p21-activated serine/t 100.0 8.9E-43 1.9E-47 381.3 25.7 258 503-772 271-531 (550)
22 KOG0600 Cdc2-related protein k 100.0 1E-43 2.2E-48 382.5 17.8 266 503-777 115-413 (560)
23 KOG0661 MAPK related serine/th 100.0 6.2E-44 1.3E-48 381.6 14.2 261 502-773 7-300 (538)
24 KOG0193 Serine/threonine prote 100.0 2.7E-42 5.8E-47 378.2 25.2 265 498-766 385-657 (678)
25 KOG0580 Serine/threonine prote 100.0 5.9E-43 1.3E-47 345.7 14.8 256 502-769 19-278 (281)
26 cd05102 PTKc_VEGFR3 Catalytic 100.0 9.9E-42 2.1E-46 373.9 25.9 262 500-764 2-336 (338)
27 KOG0201 Serine/threonine prote 100.0 1.4E-43 3.1E-48 376.3 10.9 255 505-770 13-269 (467)
28 KOG4721 Serine/threonine prote 100.0 2.5E-43 5.4E-48 380.8 12.3 260 498-770 117-384 (904)
29 cd05612 STKc_PRKX_like Catalyt 100.0 8.9E-42 1.9E-46 366.7 22.8 251 505-769 1-259 (291)
30 cd05571 STKc_PKB Catalytic dom 100.0 8.9E-42 1.9E-46 372.4 21.4 248 511-769 1-256 (323)
31 KOG0585 Ca2+/calmodulin-depend 100.0 6.6E-42 1.4E-46 365.4 19.7 250 501-756 93-370 (576)
32 KOG4717 Serine/threonine prote 100.0 4.4E-42 9.5E-47 367.4 17.8 258 503-771 16-277 (864)
33 PTZ00263 protein kinase A cata 100.0 1.5E-41 3.2E-46 371.7 22.5 253 503-769 16-276 (329)
34 KOG0589 Serine/threonine prote 100.0 6.1E-42 1.3E-46 373.3 17.1 252 504-758 3-258 (426)
35 KOG0611 Predicted serine/threo 100.0 7E-42 1.5E-46 357.3 16.8 251 501-758 49-303 (668)
36 PLN00034 mitogen-activated pro 100.0 4.2E-40 9.1E-45 363.7 30.5 258 502-773 71-337 (353)
37 PHA02988 hypothetical protein; 100.0 2.3E-40 5E-45 354.6 26.3 248 511-764 26-281 (283)
38 PTZ00426 cAMP-dependent protei 100.0 6.7E-41 1.5E-45 368.4 22.8 257 500-770 25-290 (340)
39 KOG0690 Serine/threonine prote 100.0 7.2E-42 1.6E-46 349.0 13.7 259 501-770 164-430 (516)
40 cd05631 STKc_GRK4 Catalytic do 100.0 2E-40 4.4E-45 354.9 25.4 257 506-771 1-268 (285)
41 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 9.9E-41 2.1E-45 365.5 23.1 254 505-770 1-263 (333)
42 cd05595 STKc_PKB_beta Catalyti 100.0 9.2E-41 2E-45 364.5 22.5 248 511-769 1-256 (323)
43 KOG0663 Protein kinase PITSLRE 100.0 2.6E-41 5.7E-46 347.4 16.9 264 504-776 75-373 (419)
44 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.6E-40 3.5E-45 356.2 23.4 254 504-767 4-288 (288)
45 cd05573 STKc_ROCK_NDR_like Cat 100.0 6.1E-41 1.3E-45 369.1 20.3 255 505-769 1-290 (350)
46 cd05585 STKc_YPK1_like Catalyt 100.0 1.1E-40 2.4E-45 361.9 22.0 246 513-769 1-252 (312)
47 cd05593 STKc_PKB_gamma Catalyt 100.0 1.3E-40 2.8E-45 364.2 22.3 248 511-769 1-256 (328)
48 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.6E-40 5.6E-45 357.1 24.1 261 505-775 5-299 (303)
49 cd05589 STKc_PKN Catalytic dom 100.0 1.9E-40 4.2E-45 361.9 23.2 251 507-769 1-262 (324)
50 KOG0033 Ca2+/calmodulin-depend 100.0 3.3E-42 7.2E-47 340.3 7.6 256 504-769 10-272 (355)
51 cd07848 STKc_CDKL5 Catalytic d 100.0 4.1E-40 8.9E-45 351.9 23.7 254 505-767 1-287 (287)
52 cd05628 STKc_NDR1 Catalytic do 100.0 4.8E-40 1E-44 364.7 25.1 255 505-769 1-298 (363)
53 cd05584 STKc_p70S6K Catalytic 100.0 2.4E-40 5.2E-45 361.2 22.1 248 511-769 2-261 (323)
54 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.5E-39 3.2E-44 344.4 27.5 256 503-762 3-265 (266)
55 cd05599 STKc_NDR_like Catalyti 100.0 2.3E-40 5E-45 366.9 22.2 256 505-770 1-302 (364)
56 cd05587 STKc_cPKC Catalytic do 100.0 4.8E-40 1.1E-44 358.8 24.1 253 506-769 1-262 (324)
57 cd05594 STKc_PKB_alpha Catalyt 100.0 1.4E-40 3.1E-45 363.1 19.7 248 511-769 1-257 (325)
58 cd06649 PKc_MEK2 Catalytic dom 100.0 2.1E-39 4.6E-44 354.9 28.9 256 503-770 3-307 (331)
59 cd05590 STKc_nPKC_eta Catalyti 100.0 3E-40 6.6E-45 360.0 21.6 255 511-770 1-259 (320)
60 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.2E-39 2.7E-44 356.5 26.2 258 506-773 1-299 (338)
61 cd05626 STKc_LATS2 Catalytic d 100.0 7.1E-40 1.5E-44 365.8 24.5 255 506-769 2-310 (381)
62 KOG0579 Ste20-like serine/thre 100.0 2E-41 4.3E-46 368.8 11.2 258 505-772 32-297 (1187)
63 cd05629 STKc_NDR_like_fungal C 100.0 4E-40 8.6E-45 367.1 22.0 255 505-769 1-310 (377)
64 cd05616 STKc_cPKC_beta Catalyt 100.0 8.9E-40 1.9E-44 356.6 23.4 253 506-769 1-262 (323)
65 cd05582 STKc_RSK_N N-terminal 100.0 1.9E-40 4.1E-45 361.0 18.0 239 511-754 2-245 (318)
66 cd05601 STKc_CRIK Catalytic do 100.0 3.1E-40 6.7E-45 361.0 19.6 256 505-769 1-268 (330)
67 cd05106 PTKc_CSF-1R Catalytic 100.0 1.5E-39 3.2E-44 362.4 25.1 262 499-763 32-373 (374)
68 KOG0032 Ca2+/calmodulin-depend 100.0 1.6E-39 3.5E-44 358.5 24.8 259 501-770 31-299 (382)
69 cd05592 STKc_nPKC_theta_delta 100.0 8.3E-40 1.8E-44 355.9 22.3 248 511-769 1-253 (316)
70 cd05591 STKc_nPKC_epsilon Cata 100.0 7.1E-40 1.5E-44 357.0 21.7 248 511-769 1-259 (321)
71 KOG1989 ARK protein kinase fam 100.0 1.5E-39 3.1E-44 373.0 25.2 259 498-764 30-313 (738)
72 PTZ00036 glycogen synthase kin 100.0 4.8E-39 1E-43 365.6 29.2 255 503-773 64-360 (440)
73 cd05596 STKc_ROCK Catalytic do 100.0 9.7E-40 2.1E-44 363.3 22.8 259 501-769 39-309 (370)
74 cd05096 PTKc_DDR1 Catalytic do 100.0 4.6E-39 1E-43 347.3 27.4 255 503-760 3-303 (304)
75 cd05598 STKc_LATS Catalytic do 100.0 5.3E-40 1.2E-44 365.9 20.5 255 505-769 1-306 (376)
76 cd07862 STKc_CDK6 Catalytic do 100.0 1.4E-39 3.1E-44 348.3 22.8 253 505-767 1-290 (290)
77 cd05625 STKc_LATS1 Catalytic d 100.0 9.9E-40 2.1E-44 364.6 22.4 254 506-769 2-310 (382)
78 KOG0194 Protein tyrosine kinas 100.0 6.3E-40 1.4E-44 363.8 20.4 268 497-767 149-425 (474)
79 cd05620 STKc_nPKC_delta Cataly 100.0 1.1E-39 2.4E-44 354.9 21.6 249 511-770 1-254 (316)
80 cd05570 STKc_PKC Catalytic dom 100.0 1.4E-39 3E-44 354.4 22.2 249 511-770 1-258 (318)
81 cd05104 PTKc_Kit Catalytic dom 100.0 3E-39 6.6E-44 360.0 25.4 261 499-762 29-374 (375)
82 cd05614 STKc_MSK2_N N-terminal 100.0 1.5E-39 3.3E-44 355.8 22.4 253 506-769 1-272 (332)
83 cd06650 PKc_MEK1 Catalytic dom 100.0 8.2E-39 1.8E-43 350.7 28.1 259 502-772 2-307 (333)
84 cd05048 PTKc_Ror Catalytic Dom 100.0 4.6E-39 9.9E-44 342.9 25.3 255 503-761 3-282 (283)
85 cd05588 STKc_aPKC Catalytic do 100.0 1.5E-39 3.2E-44 355.9 22.0 248 511-769 1-267 (329)
86 cd05621 STKc_ROCK2 Catalytic d 100.0 1.9E-39 4.1E-44 361.0 22.8 260 501-770 39-310 (370)
87 KOG0574 STE20-like serine/thre 100.0 9.2E-42 2E-46 344.9 3.8 256 505-772 33-291 (502)
88 cd05619 STKc_nPKC_theta Cataly 100.0 2.2E-39 4.8E-44 352.6 22.7 248 511-769 1-253 (316)
89 cd05575 STKc_SGK Catalytic dom 100.0 1.5E-39 3.2E-44 354.8 21.0 252 511-769 1-256 (323)
90 KOG0594 Protein kinase PCTAIRE 100.0 1.2E-39 2.5E-44 341.7 19.2 261 504-773 10-311 (323)
91 PTZ00283 serine/threonine prot 100.0 1.4E-38 3.1E-43 366.5 29.9 254 502-758 29-297 (496)
92 cd05615 STKc_cPKC_alpha Cataly 100.0 3.7E-39 7.9E-44 351.9 23.8 254 506-770 1-263 (323)
93 cd05627 STKc_NDR2 Catalytic do 100.0 1.6E-39 3.5E-44 360.0 21.2 256 505-770 1-299 (360)
94 cd05608 STKc_GRK1 Catalytic do 100.0 6.1E-39 1.3E-43 342.6 24.6 251 513-771 1-264 (280)
95 KOG1026 Nerve growth factor re 100.0 2.4E-39 5.2E-44 369.5 22.4 265 496-764 477-764 (774)
96 cd07872 STKc_PCTAIRE2 Catalyti 100.0 8.3E-39 1.8E-43 346.3 25.5 260 504-773 5-295 (309)
97 KOG0660 Mitogen-activated prot 100.0 1.7E-39 3.7E-44 339.3 18.9 256 504-769 21-315 (359)
98 cd05618 STKc_aPKC_iota Catalyt 100.0 3.3E-39 7.2E-44 353.2 21.8 250 511-770 1-268 (329)
99 cd05072 PTKc_Lyn Catalytic dom 100.0 1.8E-38 4E-43 334.2 26.2 257 500-762 1-261 (261)
100 cd08228 STKc_Nek6 Catalytic do 100.0 2.6E-38 5.6E-43 333.9 27.3 257 505-763 2-266 (267)
101 cd05033 PTKc_EphR Catalytic do 100.0 2.9E-38 6.3E-43 333.8 27.6 255 504-762 3-265 (266)
102 cd06625 STKc_MEKK3_like Cataly 100.0 2.4E-38 5.1E-43 333.2 26.8 250 505-757 2-259 (263)
103 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.9E-38 4.2E-43 355.9 27.6 263 498-763 30-398 (400)
104 cd07876 STKc_JNK2 Catalytic do 100.0 1.9E-38 4E-43 351.3 27.1 254 503-769 19-320 (359)
105 PF07714 Pkinase_Tyr: Protein 100.0 8.8E-39 1.9E-43 337.6 23.0 248 508-759 2-259 (259)
106 cd05061 PTKc_InsR Catalytic do 100.0 2.6E-38 5.7E-43 338.7 26.6 267 500-770 1-286 (288)
107 cd05622 STKc_ROCK1 Catalytic d 100.0 9.1E-39 2E-43 355.6 23.8 260 500-769 38-309 (371)
108 cd05054 PTKc_VEGFR Catalytic d 100.0 1.3E-38 2.8E-43 349.9 24.6 262 500-764 2-335 (337)
109 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.1E-38 2.5E-43 335.5 23.1 257 501-762 2-261 (261)
110 cd05052 PTKc_Abl Catalytic dom 100.0 4.5E-38 9.7E-43 332.1 27.6 257 500-762 1-262 (263)
111 cd05114 PTKc_Tec_Rlk Catalytic 100.0 4E-38 8.7E-43 330.8 27.1 249 505-759 4-255 (256)
112 PTZ00267 NIMA-related protein 100.0 3.7E-38 7.9E-43 362.2 29.1 248 505-757 67-322 (478)
113 cd05597 STKc_DMPK_like Catalyt 100.0 1.1E-38 2.5E-43 349.2 23.7 257 505-769 1-271 (331)
114 cd05605 STKc_GRK4_like Catalyt 100.0 1.3E-38 2.9E-43 340.9 23.6 255 506-769 1-266 (285)
115 PTZ00284 protein kinase; Provi 100.0 7.3E-38 1.6E-42 358.9 31.0 254 503-772 127-446 (467)
116 cd05603 STKc_SGK2 Catalytic do 100.0 5.1E-39 1.1E-43 350.2 20.4 238 511-753 1-242 (321)
117 cd08529 STKc_FA2-like Catalyti 100.0 4.9E-38 1.1E-42 329.1 27.0 249 506-757 1-252 (256)
118 cd05604 STKc_SGK3 Catalytic do 100.0 4E-39 8.7E-44 351.7 19.4 252 511-769 1-256 (325)
119 cd05098 PTKc_FGFR1 Catalytic d 100.0 6.1E-38 1.3E-42 339.2 28.4 264 499-766 12-303 (307)
120 cd05602 STKc_SGK1 Catalytic do 100.0 6.1E-39 1.3E-43 350.3 20.7 250 511-767 1-254 (325)
121 cd05617 STKc_aPKC_zeta Catalyt 100.0 5.5E-39 1.2E-43 351.1 20.4 256 511-770 1-266 (327)
122 cd07853 STKc_NLK Catalytic dom 100.0 1.9E-38 4.1E-43 353.0 24.6 256 506-771 1-295 (372)
123 PF00069 Pkinase: Protein kina 100.0 7E-39 1.5E-43 336.0 20.0 252 507-767 1-260 (260)
124 cd05062 PTKc_IGF-1R Catalytic 100.0 4.8E-38 1E-42 334.4 26.5 256 501-760 2-276 (277)
125 PHA03212 serine/threonine kina 100.0 2.6E-38 5.6E-43 354.2 25.4 254 502-773 89-385 (391)
126 cd05068 PTKc_Frk_like Catalyti 100.0 6.3E-38 1.4E-42 330.3 26.9 257 500-762 1-261 (261)
127 cd05108 PTKc_EGFR Catalytic do 100.0 6.2E-38 1.4E-42 340.7 27.7 258 504-766 6-272 (316)
128 cd05623 STKc_MRCK_alpha Cataly 100.0 1.3E-38 2.9E-43 348.7 22.5 257 505-769 1-271 (332)
129 cd05624 STKc_MRCK_beta Catalyt 100.0 1.4E-38 2.9E-43 348.6 22.0 257 505-769 1-271 (331)
130 cd05113 PTKc_Btk_Bmx Catalytic 100.0 7.2E-38 1.6E-42 329.5 26.6 250 504-759 3-255 (256)
131 KOG0596 Dual specificity; seri 100.0 1.3E-38 2.9E-43 345.2 21.4 260 501-770 357-633 (677)
132 KOG0658 Glycogen synthase kina 100.0 3E-39 6.6E-44 338.0 15.8 254 505-774 24-316 (364)
133 cd05032 PTKc_InsR_like Catalyt 100.0 6.8E-38 1.5E-42 332.5 26.3 257 500-760 1-276 (277)
134 cd05090 PTKc_Ror1 Catalytic do 100.0 1E-37 2.2E-42 333.0 27.7 255 503-761 3-282 (283)
135 cd05049 PTKc_Trk Catalytic dom 100.0 4.4E-38 9.6E-43 334.5 24.7 253 504-760 4-279 (280)
136 cd05089 PTKc_Tie1 Catalytic do 100.0 1.1E-37 2.4E-42 335.7 28.0 258 504-766 1-279 (297)
137 cd05039 PTKc_Csk_like Catalyti 100.0 1E-37 2.2E-42 327.5 27.1 251 502-761 3-255 (256)
138 PHA03207 serine/threonine kina 100.0 8.2E-38 1.8E-42 350.5 28.1 255 502-773 89-384 (392)
139 cd08223 STKc_Nek4 Catalytic do 100.0 1E-37 2.3E-42 327.1 27.1 249 506-757 1-253 (257)
140 cd05067 PTKc_Lck_Blk Catalytic 100.0 8.7E-38 1.9E-42 329.1 26.4 255 500-761 1-259 (260)
141 cd05607 STKc_GRK7 Catalytic do 100.0 3.9E-38 8.4E-43 335.9 23.9 253 513-770 1-260 (277)
142 cd05082 PTKc_Csk Catalytic dom 100.0 9.2E-38 2E-42 328.1 26.4 251 502-762 3-256 (256)
143 cd07875 STKc_JNK1 Catalytic do 100.0 5E-38 1.1E-42 348.5 25.6 254 503-769 22-323 (364)
144 cd07873 STKc_PCTAIRE1 Catalyti 100.0 4.3E-38 9.3E-43 339.3 24.4 257 504-770 5-292 (301)
145 PTZ00266 NIMA-related protein 100.0 8.4E-38 1.8E-42 372.5 29.1 266 499-773 7-304 (1021)
146 cd06644 STKc_STK10_LOK Catalyt 100.0 9E-38 1.9E-42 335.1 26.4 258 504-771 11-276 (292)
147 cd07874 STKc_JNK3 Catalytic do 100.0 4E-38 8.8E-43 347.9 24.4 253 503-768 15-315 (355)
148 KOG4279 Serine/threonine prote 100.0 2E-39 4.4E-44 356.5 13.8 250 511-770 581-838 (1226)
149 cd05035 PTKc_Axl_like Catalyti 100.0 1.2E-37 2.5E-42 329.4 26.9 253 507-762 1-272 (273)
150 cd05075 PTKc_Axl Catalytic dom 100.0 1.4E-37 3E-42 329.2 27.5 253 507-762 1-271 (272)
151 cd05059 PTKc_Tec_like Catalyti 100.0 9.3E-38 2E-42 328.3 25.8 250 504-759 3-255 (256)
152 cd05084 PTKc_Fes Catalytic dom 100.0 1E-37 2.2E-42 326.7 25.9 246 511-760 1-251 (252)
153 KOG1095 Protein tyrosine kinas 100.0 2.8E-38 6.1E-43 372.6 23.9 263 502-768 689-967 (1025)
154 cd05116 PTKc_Syk Catalytic dom 100.0 1.4E-37 3.1E-42 327.1 26.7 245 512-761 2-254 (257)
155 cd05053 PTKc_FGFR Catalytic do 100.0 1E-37 2.2E-42 334.5 25.9 261 499-763 6-292 (293)
156 cd08219 STKc_Nek3 Catalytic do 100.0 1.4E-37 3E-42 326.3 26.4 249 506-758 1-252 (255)
157 cd07863 STKc_CDK4 Catalytic do 100.0 4.1E-38 8.9E-43 336.4 22.7 252 506-767 1-288 (288)
158 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.2E-37 2.5E-42 349.6 27.4 263 498-763 30-400 (401)
159 KOG2345 Serine/threonine prote 100.0 8.3E-39 1.8E-43 317.6 15.9 261 501-763 17-301 (302)
160 KOG0667 Dual-specificity tyros 100.0 2E-38 4.3E-43 353.5 20.9 250 504-768 185-506 (586)
161 cd00192 PTKc Catalytic domain 100.0 1.3E-37 2.7E-42 325.8 25.7 246 511-760 1-262 (262)
162 cd08229 STKc_Nek7 Catalytic do 100.0 7.9E-38 1.7E-42 330.2 24.2 257 505-763 2-266 (267)
163 cd05094 PTKc_TrkC Catalytic do 100.0 2.3E-37 4.9E-42 332.0 28.1 257 503-764 3-284 (291)
164 cd05066 PTKc_EphR_A Catalytic 100.0 1.9E-37 4.1E-42 328.0 26.9 255 504-762 3-266 (267)
165 cd05093 PTKc_TrkB Catalytic do 100.0 3.3E-37 7.1E-42 330.3 28.9 257 503-764 3-281 (288)
166 cd05088 PTKc_Tie2 Catalytic do 100.0 1.6E-37 3.5E-42 335.6 26.7 265 503-772 5-290 (303)
167 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.7E-37 5.8E-42 325.6 27.7 256 505-763 2-266 (267)
168 cd05101 PTKc_FGFR2 Catalytic d 100.0 2E-37 4.4E-42 334.5 27.4 262 499-764 9-298 (304)
169 cd05630 STKc_GRK6 Catalytic do 100.0 1.1E-37 2.3E-42 334.0 25.1 255 506-770 1-267 (285)
170 cd05109 PTKc_HER2 Catalytic do 100.0 2.2E-37 4.8E-42 329.6 27.3 258 504-766 6-272 (279)
171 cd05056 PTKc_FAK Catalytic dom 100.0 2.8E-37 6.1E-42 327.1 27.8 259 501-764 2-267 (270)
172 cd05045 PTKc_RET Catalytic dom 100.0 2.2E-37 4.7E-42 331.8 27.1 255 506-764 1-288 (290)
173 KOG4257 Focal adhesion tyrosin 100.0 1.5E-38 3.3E-43 346.9 18.3 262 498-764 382-651 (974)
174 cd06611 STKc_SLK_like Catalyti 100.0 7.5E-38 1.6E-42 333.2 23.3 257 504-770 4-268 (280)
175 cd05071 PTKc_Src Catalytic dom 100.0 2.8E-37 6E-42 326.2 27.5 255 501-762 2-260 (262)
176 cd07861 STKc_CDK1_euk Catalyti 100.0 9.8E-38 2.1E-42 332.7 24.2 248 506-756 1-280 (285)
177 cd05099 PTKc_FGFR4 Catalytic d 100.0 3.2E-37 6.9E-42 334.8 28.5 263 499-765 6-296 (314)
178 cd05034 PTKc_Src_like Catalyti 100.0 2.8E-37 6.1E-42 324.9 27.2 256 500-761 1-260 (261)
179 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.4E-37 3E-42 342.3 25.9 262 500-764 2-341 (343)
180 cd05055 PTKc_PDGFR Catalytic d 100.0 2.5E-37 5.4E-42 334.1 27.4 261 499-762 29-301 (302)
181 cd05091 PTKc_Ror2 Catalytic do 100.0 1E-37 2.2E-42 332.8 23.8 255 503-761 3-282 (283)
182 cd05580 STKc_PKA Catalytic dom 100.0 1.9E-37 4.2E-42 332.4 25.6 252 505-770 1-260 (290)
183 cd05586 STKc_Sck1_like Catalyt 100.0 1.8E-38 4E-43 347.1 18.1 246 513-769 1-258 (330)
184 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.4E-37 5.1E-42 325.7 25.8 255 500-761 1-259 (260)
185 cd07878 STKc_p38beta_MAPK11 Ca 100.0 7.1E-38 1.5E-42 344.2 22.7 256 503-772 13-306 (343)
186 cd06655 STKc_PAK2 Catalytic do 100.0 4.1E-37 8.8E-42 331.5 28.0 261 500-772 14-277 (296)
187 cd08218 STKc_Nek1 Catalytic do 100.0 2.5E-37 5.5E-42 324.3 25.7 249 506-757 1-252 (256)
188 cd05111 PTK_HER3 Pseudokinase 100.0 4.6E-37 9.9E-42 327.8 28.1 256 504-764 6-270 (279)
189 KOG0584 Serine/threonine prote 100.0 9E-39 2E-43 352.9 15.3 256 506-772 41-304 (632)
190 cd05069 PTKc_Yes Catalytic dom 100.0 4.6E-37 1E-41 323.8 27.7 254 501-761 2-259 (260)
191 cd05115 PTKc_Zap-70 Catalytic 100.0 4E-37 8.8E-42 324.2 27.3 246 512-762 2-255 (257)
192 cd07839 STKc_CDK5 Catalytic do 100.0 7.2E-38 1.6E-42 333.8 21.8 253 506-767 1-284 (284)
193 cd05036 PTKc_ALK_LTK Catalytic 100.0 4E-37 8.7E-42 327.5 27.3 254 503-760 4-276 (277)
194 KOG0586 Serine/threonine prote 100.0 5.7E-38 1.2E-42 346.4 21.3 251 501-757 52-305 (596)
195 cd06637 STKc_TNIK Catalytic do 100.0 1.3E-37 2.8E-42 329.5 23.2 253 504-767 5-272 (272)
196 cd05632 STKc_GRK5 Catalytic do 100.0 3.3E-37 7.1E-42 330.1 26.6 256 506-770 1-267 (285)
197 KOG0599 Phosphorylase kinase g 100.0 9.7E-39 2.1E-43 319.8 13.5 258 502-769 14-288 (411)
198 cd06643 STKc_SLK Catalytic dom 100.0 2E-37 4.3E-42 330.5 24.6 255 506-770 6-268 (282)
199 cd08221 STKc_Nek9 Catalytic do 100.0 4.8E-37 1E-41 322.2 27.1 250 506-758 1-253 (256)
200 cd06654 STKc_PAK1 Catalytic do 100.0 3.9E-37 8.4E-42 331.5 27.1 262 499-772 14-278 (296)
201 cd05574 STKc_phototropin_like 100.0 3.6E-37 7.9E-42 334.2 27.0 259 505-771 1-296 (316)
202 KOG0577 Serine/threonine prote 100.0 5.6E-39 1.2E-43 348.4 12.6 245 506-757 27-277 (948)
203 cd05065 PTKc_EphR_B Catalytic 100.0 4.9E-37 1.1E-41 325.0 27.3 255 504-762 3-268 (269)
204 cd08227 PK_STRAD_alpha Pseudok 100.0 1.9E-37 4.1E-42 338.7 24.8 254 509-770 2-313 (327)
205 PHA03211 serine/threonine kina 100.0 2.2E-36 4.7E-41 344.0 34.4 249 504-769 168-460 (461)
206 cd05051 PTKc_DDR Catalytic dom 100.0 2.5E-37 5.4E-42 331.6 25.2 254 504-760 4-295 (296)
207 cd05060 PTKc_Syk_like Catalyti 100.0 5E-37 1.1E-41 322.7 26.8 246 511-762 1-255 (257)
208 cd06619 PKc_MKK5 Catalytic dom 100.0 3.6E-37 7.7E-42 328.5 25.7 250 505-770 1-259 (279)
209 cd06628 STKc_MAPKKK_Byr2_like 100.0 3.3E-37 7.2E-42 325.4 25.0 248 506-757 1-263 (267)
210 cd06615 PKc_MEK Catalytic doma 100.0 5E-37 1.1E-41 332.5 27.0 256 505-772 1-295 (308)
211 cd06609 STKc_MST3_like Catalyt 100.0 2.9E-37 6.3E-42 327.6 24.6 255 505-771 1-258 (274)
212 cd06612 STKc_MST1_2 Catalytic 100.0 2E-37 4.4E-42 324.4 23.0 246 505-756 3-251 (256)
213 cd05063 PTKc_EphR_A2 Catalytic 100.0 8.5E-37 1.8E-41 322.8 27.9 256 503-762 3-267 (268)
214 cd06613 STKc_MAP4K3_like Catal 100.0 4.1E-37 8.8E-42 323.3 25.2 250 504-757 2-259 (262)
215 cd06646 STKc_MAP4K5 Catalytic 100.0 2E-37 4.3E-42 327.4 22.8 251 504-759 8-266 (267)
216 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 6.1E-37 1.3E-41 327.0 26.6 254 505-763 3-282 (283)
217 PHA03209 serine/threonine kina 100.0 3.9E-37 8.5E-42 340.7 25.7 248 504-769 65-356 (357)
218 cd06651 STKc_MEKK3 Catalytic d 100.0 4.9E-37 1.1E-41 324.7 25.3 254 505-768 2-265 (266)
219 cd05092 PTKc_TrkA Catalytic do 100.0 5.2E-37 1.1E-41 327.4 25.8 253 503-760 3-279 (280)
220 KOG1187 Serine/threonine prote 100.0 1.4E-37 3E-42 342.4 21.8 258 503-763 73-353 (361)
221 cd05097 PTKc_DDR_like Catalyti 100.0 4.4E-37 9.6E-42 330.4 25.3 255 503-760 3-294 (295)
222 cd07847 STKc_CDKL1_4 Catalytic 100.0 3.3E-37 7.1E-42 328.6 24.0 254 505-767 1-286 (286)
223 cd06631 STKc_YSK4 Catalytic do 100.0 5.2E-37 1.1E-41 323.9 25.1 253 506-767 1-265 (265)
224 cd05040 PTKc_Ack_like Catalyti 100.0 4.5E-37 9.7E-42 322.6 24.5 246 511-760 1-256 (257)
225 cd06656 STKc_PAK3 Catalytic do 100.0 3.5E-37 7.6E-42 332.0 24.2 260 502-773 16-278 (297)
226 cd05073 PTKc_Hck Catalytic dom 100.0 9.9E-37 2.1E-41 321.2 27.0 255 500-761 1-259 (260)
227 cd05100 PTKc_FGFR3 Catalytic d 100.0 9E-37 2E-41 334.3 27.6 263 498-764 5-295 (334)
228 cd05085 PTKc_Fer Catalytic dom 100.0 1.3E-36 2.8E-41 317.7 27.3 246 511-760 1-249 (250)
229 cd05043 PTK_Ryk Pseudokinase d 100.0 1.3E-36 2.8E-41 323.7 27.8 259 503-765 4-279 (280)
230 cd08217 STKc_Nek2 Catalytic do 100.0 1.1E-36 2.4E-41 319.5 26.8 249 506-757 1-261 (265)
231 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.2E-37 9.1E-42 328.5 23.9 258 505-773 1-271 (286)
232 cd05050 PTKc_Musk Catalytic do 100.0 7.8E-37 1.7E-41 327.0 26.0 254 503-760 3-287 (288)
233 cd07845 STKc_CDK10 Catalytic d 100.0 5.1E-37 1.1E-41 332.2 24.6 263 504-775 6-301 (309)
234 cd05057 PTKc_EGFR_like Catalyt 100.0 1.5E-36 3.2E-41 323.3 27.7 256 504-764 6-270 (279)
235 cd06605 PKc_MAPKK Catalytic do 100.0 3.1E-37 6.7E-42 325.0 22.1 253 505-769 1-262 (265)
236 cd05095 PTKc_DDR2 Catalytic do 100.0 9.8E-37 2.1E-41 327.9 26.4 254 504-760 4-295 (296)
237 cd05112 PTKc_Itk Catalytic dom 100.0 1.7E-36 3.7E-41 317.9 27.3 249 505-759 4-255 (256)
238 cd05041 PTKc_Fes_like Catalyti 100.0 1.4E-36 3E-41 317.7 26.2 246 511-760 1-250 (251)
239 cd06645 STKc_MAP4K3 Catalytic 100.0 4.2E-37 9.1E-42 324.9 22.3 249 504-757 8-264 (267)
240 cd07832 STKc_CCRK Catalytic do 100.0 9.5E-37 2.1E-41 325.0 24.9 253 506-767 1-285 (286)
241 cd05083 PTKc_Chk Catalytic dom 100.0 1.2E-36 2.5E-41 319.4 25.1 247 503-760 4-252 (254)
242 KOG0983 Mitogen-activated prot 100.0 2.2E-37 4.7E-42 310.5 18.4 255 499-758 86-349 (391)
243 cd05047 PTKc_Tie Catalytic dom 100.0 1.8E-36 4E-41 321.2 26.7 248 511-763 1-269 (270)
244 cd05572 STKc_cGK_PKG Catalytic 100.0 1.3E-36 2.8E-41 320.3 25.3 247 513-769 1-257 (262)
245 cd05058 PTKc_Met_Ron Catalytic 100.0 1.9E-36 4.2E-41 318.7 26.5 249 511-763 1-260 (262)
246 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.4E-36 5.1E-41 322.4 27.4 254 505-762 4-283 (284)
247 cd06652 STKc_MEKK2 Catalytic d 100.0 1.9E-36 4.1E-41 319.8 26.4 248 505-756 2-259 (265)
248 cd06632 STKc_MEKK1_plant Catal 100.0 1.2E-36 2.5E-41 318.8 24.5 248 506-757 1-254 (258)
249 cd06638 STKc_myosinIIIA Cataly 100.0 1.4E-36 3.1E-41 324.1 25.2 253 501-758 14-283 (286)
250 cd06642 STKc_STK25-YSK1 Cataly 100.0 6.8E-37 1.5E-41 325.5 22.4 252 505-768 4-257 (277)
251 cd08220 STKc_Nek8 Catalytic do 100.0 1.7E-36 3.7E-41 317.4 25.0 248 506-757 1-252 (256)
252 KOG4645 MAPKKK (MAP kinase kin 100.0 6.2E-39 1.4E-43 375.1 7.2 258 506-773 1236-1503(1509)
253 PRK13184 pknD serine/threonine 100.0 1.9E-36 4.1E-41 359.7 28.5 257 505-764 2-292 (932)
254 cd06624 STKc_ASK Catalytic dom 100.0 2.3E-36 4.9E-41 319.7 26.1 248 505-756 8-263 (268)
255 cd06636 STKc_MAP4K4_6 Catalyti 100.0 9.4E-37 2E-41 325.1 23.3 248 504-756 15-277 (282)
256 cd06640 STKc_MST4 Catalytic do 100.0 1.6E-36 3.4E-41 322.9 24.8 256 505-772 4-261 (277)
257 cd07841 STKc_CDK7 Catalytic do 100.0 1.6E-36 3.4E-41 326.0 25.0 261 506-775 1-293 (298)
258 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.7E-36 3.6E-41 319.2 24.6 253 505-767 1-267 (267)
259 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.1E-36 4.4E-41 323.3 25.5 255 505-762 4-283 (284)
260 cd07868 STKc_CDK8 Catalytic do 100.0 1.1E-36 2.3E-41 330.6 23.7 245 510-767 6-317 (317)
261 cd05046 PTK_CCK4 Pseudokinase 100.0 2.4E-36 5.2E-41 320.6 25.8 254 504-760 4-274 (275)
262 cd06639 STKc_myosinIIIB Cataly 100.0 3E-36 6.5E-41 322.9 26.7 255 503-768 20-291 (291)
263 cd07846 STKc_CDKL2_3 Catalytic 100.0 6.9E-37 1.5E-41 326.3 21.6 254 505-767 1-286 (286)
264 PHA03210 serine/threonine kina 100.0 1.2E-36 2.7E-41 351.1 25.4 258 503-769 146-459 (501)
265 cd06617 PKc_MKK3_6 Catalytic d 100.0 2.3E-36 5E-41 321.8 25.5 256 505-772 1-269 (283)
266 cd06623 PKc_MAPKK_plant_like C 100.0 3.5E-36 7.6E-41 316.2 26.5 255 505-770 1-262 (264)
267 cd05578 STKc_Yank1 Catalytic d 100.0 4.8E-37 1E-41 322.8 19.8 244 506-755 1-252 (258)
268 smart00219 TyrKc Tyrosine kina 100.0 3E-36 6.5E-41 315.4 25.7 249 507-759 1-258 (258)
269 cd06630 STKc_MEKK1 Catalytic d 100.0 1.5E-36 3.2E-41 320.4 23.3 254 506-768 1-268 (268)
270 cd08225 STKc_Nek5 Catalytic do 100.0 1.8E-36 3.9E-41 317.5 23.3 249 506-757 1-253 (257)
271 cd05110 PTKc_HER4 Catalytic do 100.0 4.1E-36 9E-41 324.5 26.7 259 504-767 6-273 (303)
272 cd06606 STKc_MAPKKK Catalytic 100.0 4.2E-36 9.1E-41 313.2 25.7 253 506-767 1-260 (260)
273 cd06641 STKc_MST3 Catalytic do 100.0 5.8E-36 1.3E-40 318.6 27.3 256 505-772 4-261 (277)
274 cd07860 STKc_CDK2_3 Catalytic 100.0 1.6E-36 3.4E-41 323.5 22.8 253 506-767 1-284 (284)
275 cd06626 STKc_MEKK4 Catalytic d 100.0 3.3E-36 7E-41 316.8 24.9 247 506-756 1-259 (264)
276 KOG1094 Discoidin domain recep 100.0 2.8E-36 6.1E-41 327.9 24.9 260 500-762 533-804 (807)
277 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.7E-36 5.9E-41 320.8 24.1 255 505-762 4-283 (284)
278 cd05609 STKc_MAST Catalytic do 100.0 5.4E-36 1.2E-40 323.7 26.6 259 505-769 1-278 (305)
279 cd07843 STKc_CDC2L1 Catalytic 100.0 1.9E-36 4.1E-41 324.8 22.8 254 505-767 5-293 (293)
280 cd08215 STKc_Nek Catalytic dom 100.0 4.4E-36 9.5E-41 313.4 24.8 249 506-757 1-254 (258)
281 cd07833 STKc_CDKL Catalytic do 100.0 2.6E-36 5.6E-41 322.0 23.5 249 505-756 1-283 (288)
282 cd06629 STKc_MAPKKK_Bck1_like 100.0 4.2E-36 9.1E-41 318.2 24.5 249 506-757 2-268 (272)
283 cd06647 STKc_PAK_I Catalytic d 100.0 4.2E-36 9.2E-41 322.9 24.7 258 503-772 17-277 (293)
284 cd06627 STKc_Cdc7_like Catalyt 100.0 7.5E-36 1.6E-40 311.6 25.9 247 506-756 1-249 (254)
285 cd07844 STKc_PCTAIRE_like Cata 100.0 3.2E-36 6.9E-41 322.5 23.6 254 504-767 4-291 (291)
286 cd06607 STKc_TAO Catalytic dom 100.0 8.1E-36 1.8E-40 322.6 26.8 256 503-771 13-274 (307)
287 KOG0612 Rho-associated, coiled 100.0 7.9E-38 1.7E-42 361.8 11.6 257 502-768 72-342 (1317)
288 cd06608 STKc_myosinIII_like Ca 100.0 3.2E-36 7E-41 318.2 23.0 249 504-757 5-271 (275)
289 cd06658 STKc_PAK5 Catalytic do 100.0 2.2E-36 4.8E-41 325.1 22.1 257 504-772 21-280 (292)
290 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2.9E-36 6.3E-41 322.1 22.8 253 504-769 4-271 (284)
291 cd07837 STKc_CdkB_plant Cataly 100.0 3.5E-36 7.7E-41 322.6 23.5 255 505-768 1-295 (295)
292 cd07850 STKc_JNK Catalytic dom 100.0 4.9E-36 1.1E-40 331.1 25.2 253 503-768 14-315 (353)
293 cd06917 STKc_NAK1_like Catalyt 100.0 5.3E-36 1.1E-40 318.3 24.3 255 506-772 2-263 (277)
294 cd06614 STKc_PAK Catalytic dom 100.0 6.7E-36 1.5E-40 319.4 25.0 256 503-769 17-275 (286)
295 cd05044 PTKc_c-ros Catalytic d 100.0 4.5E-36 9.8E-41 317.1 23.1 245 512-760 2-268 (269)
296 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.2E-35 2.5E-40 314.7 26.1 253 507-762 1-272 (273)
297 cd08528 STKc_Nek10 Catalytic d 100.0 1.2E-35 2.6E-40 314.2 26.1 252 506-760 1-268 (269)
298 cd05042 PTKc_Aatyk Catalytic d 100.0 1.3E-35 2.9E-40 314.0 26.4 245 511-759 1-267 (269)
299 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 6.7E-36 1.5E-40 316.0 24.1 238 511-759 1-261 (262)
300 cd07870 STKc_PFTAIRE2 Catalyti 100.0 6.5E-36 1.4E-40 320.3 24.3 253 505-767 5-291 (291)
301 PLN00009 cyclin-dependent kina 100.0 1.1E-35 2.3E-40 319.2 25.8 258 505-771 2-291 (294)
302 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.7E-35 3.7E-40 313.4 26.4 245 511-759 1-267 (269)
303 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 7E-36 1.5E-40 313.3 23.1 236 511-759 1-258 (259)
304 cd07867 STKc_CDC2L6 Catalytic 100.0 4.3E-36 9.4E-41 325.5 22.1 245 510-767 6-317 (317)
305 KOG4236 Serine/threonine prote 100.0 2.5E-37 5.3E-42 331.7 12.0 244 510-756 569-817 (888)
306 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 3E-36 6.5E-41 317.4 20.2 238 511-759 1-257 (258)
307 cd06659 STKc_PAK6 Catalytic do 100.0 7.3E-36 1.6E-40 321.9 23.5 255 505-771 21-278 (297)
308 cd06648 STKc_PAK_II Catalytic 100.0 1.5E-35 3.2E-40 317.3 25.4 255 506-772 20-277 (285)
309 cd07865 STKc_CDK9 Catalytic do 100.0 9.5E-36 2.1E-40 321.1 24.0 259 500-767 7-310 (310)
310 cd07835 STKc_CDK1_like Catalyt 100.0 7.1E-36 1.5E-40 318.3 22.6 247 507-756 1-278 (283)
311 cd05577 STKc_GRK Catalytic dom 100.0 1.1E-35 2.5E-40 316.3 24.1 249 513-770 1-260 (277)
312 cd05122 PKc_STE Catalytic doma 100.0 3.2E-35 6.9E-40 305.3 26.4 246 506-757 1-250 (253)
313 cd05633 STKc_GRK3 Catalytic do 100.0 9.6E-36 2.1E-40 317.9 23.1 248 512-771 1-262 (279)
314 cd05581 STKc_PDK1 Catalytic do 100.0 7.2E-36 1.6E-40 316.6 21.8 247 505-756 1-275 (280)
315 cd07858 STKc_TEY_MAPK_plant Ca 100.0 9.4E-36 2E-40 326.8 23.4 262 504-775 4-302 (337)
316 KOG0986 G protein-coupled rece 100.0 4E-37 8.7E-42 326.7 11.9 260 503-771 183-453 (591)
317 cd07834 STKc_MAPK Catalytic do 100.0 9.5E-36 2.1E-40 325.1 23.1 262 506-777 1-302 (330)
318 cd07836 STKc_Pho85 Catalytic d 100.0 9.8E-36 2.1E-40 317.1 22.6 252 506-767 1-284 (284)
319 cd07831 STKc_MOK Catalytic dom 100.0 1.7E-35 3.6E-40 314.7 24.3 249 507-767 1-282 (282)
320 cd05579 STKc_MAST_like Catalyt 100.0 8.8E-36 1.9E-40 312.7 21.9 250 513-770 1-263 (265)
321 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.9E-35 4.1E-40 314.8 24.4 237 512-759 2-273 (274)
322 cd06616 PKc_MKK4 Catalytic dom 100.0 1.5E-35 3.2E-40 316.8 22.8 254 505-770 4-273 (288)
323 cd06653 STKc_MEKK3_like_1 Cata 100.0 5.6E-35 1.2E-39 308.6 26.9 249 505-757 2-260 (264)
324 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 5.9E-35 1.3E-39 312.6 27.3 256 505-772 1-274 (287)
325 cd06635 STKc_TAO1 Catalytic do 100.0 4.8E-35 1E-39 318.3 27.0 248 504-758 24-277 (317)
326 cd08530 STKc_CNK2-like Catalyt 100.0 4E-35 8.6E-40 306.8 24.8 247 506-757 1-252 (256)
327 cd05611 STKc_Rim15_like Cataly 100.0 3.9E-35 8.5E-40 308.6 24.7 250 511-770 2-257 (260)
328 KOG0614 cGMP-dependent protein 100.0 3.5E-37 7.5E-42 330.2 9.1 256 502-767 417-680 (732)
329 cd05118 STKc_CMGC Catalytic do 100.0 1.7E-35 3.7E-40 314.5 22.0 247 507-756 1-278 (283)
330 KOG0696 Serine/threonine prote 100.0 2.9E-36 6.3E-41 315.9 15.4 244 502-750 346-593 (683)
331 cd07842 STKc_CDK8_like Catalyt 100.0 1.8E-35 4E-40 320.0 22.2 253 506-767 1-316 (316)
332 cd06633 STKc_TAO3 Catalytic do 100.0 9E-35 1.9E-39 315.7 26.8 254 505-771 21-280 (313)
333 cd07864 STKc_CDK12 Catalytic d 100.0 2.7E-35 5.8E-40 316.9 22.5 253 502-757 4-298 (302)
334 cd05606 STKc_beta_ARK Catalyti 100.0 6.1E-35 1.3E-39 311.4 24.5 249 512-771 1-262 (278)
335 cd07880 STKc_p38gamma_MAPK12 C 100.0 7.8E-35 1.7E-39 320.5 26.0 256 503-772 13-306 (343)
336 cd06618 PKc_MKK7 Catalytic dom 100.0 7E-35 1.5E-39 313.5 24.9 261 499-771 9-280 (296)
337 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.1E-34 2.4E-39 307.5 26.0 244 512-759 2-266 (268)
338 cd08226 PK_STRAD_beta Pseudoki 100.0 4.2E-35 9E-40 320.4 23.4 255 511-773 4-317 (328)
339 KOG0196 Tyrosine kinase, EPH ( 100.0 3.3E-36 7.3E-41 336.8 14.9 264 498-765 622-894 (996)
340 PHA03390 pk1 serine/threonine- 100.0 5.3E-35 1.1E-39 310.2 23.4 244 505-768 14-266 (267)
341 KOG4278 Protein tyrosine kinas 100.0 1.5E-35 3.3E-40 322.5 19.3 261 498-764 260-525 (1157)
342 cd07855 STKc_ERK5 Catalytic do 100.0 3E-35 6.5E-40 322.3 22.0 259 505-773 5-303 (334)
343 cd07866 STKc_BUR1 Catalytic do 100.0 4.3E-35 9.4E-40 316.1 22.1 255 504-767 7-311 (311)
344 cd08216 PK_STRAD Pseudokinase 100.0 4.3E-35 9.4E-40 317.4 22.1 257 507-771 4-302 (314)
345 PHA02882 putative serine/threo 100.0 1.4E-34 3E-39 311.4 25.5 255 501-759 8-293 (294)
346 cd07849 STKc_ERK1_2_like Catal 100.0 7.3E-35 1.6E-39 319.5 23.4 257 504-772 4-300 (336)
347 KOG0199 ACK and related non-re 100.0 1.6E-35 3.4E-40 327.0 17.6 253 502-759 107-369 (1039)
348 cd05613 STKc_MSK1_N N-terminal 100.0 1.3E-34 2.7E-39 310.2 24.1 257 506-771 1-275 (290)
349 cd08222 STKc_Nek11 Catalytic d 100.0 7.1E-35 1.5E-39 306.7 21.4 247 506-756 1-255 (260)
350 cd05123 STKc_AGC Catalytic dom 100.0 1.2E-34 2.5E-39 302.4 22.8 238 513-755 1-244 (250)
351 KOG0662 Cyclin-dependent kinas 100.0 7.8E-36 1.7E-40 282.7 12.5 255 506-769 3-288 (292)
352 PTZ00024 cyclin-dependent prot 100.0 1.3E-34 2.9E-39 317.0 24.2 263 505-777 8-326 (335)
353 cd07879 STKc_p38delta_MAPK13 C 100.0 9.9E-35 2.2E-39 319.4 23.2 254 504-772 14-305 (342)
354 cd07840 STKc_CDK9_like Catalyt 100.0 1.5E-34 3.3E-39 307.7 23.8 247 507-756 1-282 (287)
355 cd07838 STKc_CDK4_6_like Catal 100.0 1.9E-34 4.1E-39 307.2 23.8 251 507-767 1-287 (287)
356 cd06657 STKc_PAK4 Catalytic do 100.0 1.6E-34 3.5E-39 310.7 23.5 250 510-771 25-277 (292)
357 cd07877 STKc_p38alpha_MAPK14 C 100.0 3.7E-34 7.9E-39 315.4 26.5 259 502-774 14-310 (345)
358 cd05583 STKc_MSK_N N-terminal 100.0 1.4E-34 3.1E-39 309.5 22.5 259 506-772 1-274 (288)
359 KOG0671 LAMMER dual specificit 100.0 1.8E-35 3.9E-40 309.9 15.1 256 501-771 85-413 (415)
360 cd07852 STKc_MAPK15 Catalytic 100.0 1.5E-34 3.3E-39 316.9 22.9 257 503-770 5-301 (337)
361 cd06634 STKc_TAO2 Catalytic do 100.0 2.2E-34 4.8E-39 311.8 23.7 253 504-769 14-272 (308)
362 cd07829 STKc_CDK_like Catalyti 100.0 1.2E-34 2.7E-39 307.8 21.1 252 507-767 1-282 (282)
363 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 4.2E-34 9.1E-39 312.8 25.6 260 503-776 8-300 (328)
364 cd07851 STKc_p38 Catalytic dom 100.0 1.6E-34 3.5E-39 317.9 22.3 257 503-773 13-307 (343)
365 cd07857 STKc_MPK1 Catalytic do 100.0 4.3E-34 9.3E-39 312.9 25.5 256 506-771 1-299 (332)
366 cd05610 STKc_MASTL Catalytic d 100.0 6.2E-34 1.3E-38 338.9 28.3 147 504-653 3-152 (669)
367 cd07854 STKc_MAPK4_6 Catalytic 100.0 2.8E-34 6.1E-39 315.8 22.6 254 504-770 4-306 (342)
368 KOG0666 Cyclin C-dependent kin 100.0 2.2E-35 4.8E-40 300.7 11.5 258 504-770 23-343 (438)
369 KOG0695 Serine/threonine prote 100.0 1.6E-34 3.4E-39 296.0 17.2 249 498-750 243-502 (593)
370 KOG0587 Traf2- and Nck-interac 100.0 2.8E-34 6E-39 326.1 19.3 253 505-768 19-286 (953)
371 cd07830 STKc_MAK_like Catalyti 100.0 1.2E-33 2.5E-38 301.0 23.0 245 507-756 1-278 (283)
372 KOG4250 TANK binding protein k 100.0 1.5E-34 3.2E-39 323.0 15.8 255 507-765 15-313 (732)
373 KOG0607 MAP kinase-interacting 100.0 1.2E-34 2.6E-39 296.0 13.5 250 511-773 84-370 (463)
374 KOG1006 Mitogen-activated prot 100.0 3.1E-35 6.8E-40 294.2 8.5 255 499-757 58-326 (361)
375 KOG1151 Tousled-like protein k 100.0 7.1E-35 1.5E-39 307.5 11.1 260 501-767 459-744 (775)
376 KOG0604 MAP kinase-activated p 100.0 3.7E-34 8.1E-39 290.7 15.3 251 503-771 59-329 (400)
377 KOG0603 Ribosomal protein S6 k 100.0 1E-33 2.2E-38 314.3 18.0 242 503-767 320-566 (612)
378 KOG1035 eIF-2alpha kinase GCN2 100.0 9E-34 1.9E-38 330.8 17.0 244 504-757 478-870 (1351)
379 cd05576 STKc_RPK118_like Catal 100.0 4.5E-33 9.7E-38 290.0 19.0 227 516-767 4-237 (237)
380 KOG0200 Fibroblast/platelet-de 100.0 1.8E-32 3.8E-37 322.2 25.7 262 499-764 290-581 (609)
381 KOG0608 Warts/lats-like serine 100.0 1.7E-33 3.6E-38 307.8 15.4 257 504-770 628-934 (1034)
382 KOG0669 Cyclin T-dependent kin 100.0 7.6E-35 1.6E-39 289.1 3.8 264 502-774 14-325 (376)
383 KOG2052 Activin A type IB rece 100.0 4.6E-32 9.9E-37 288.6 20.7 260 498-764 204-505 (513)
384 KOG3653 Transforming growth fa 100.0 3.4E-32 7.3E-37 291.5 15.5 256 505-767 210-508 (534)
385 smart00220 S_TKc Serine/Threon 100.0 3E-31 6.5E-36 273.2 22.0 236 517-757 1-240 (244)
386 PLN00113 leucine-rich repeat r 100.0 1.4E-31 3.1E-36 333.1 20.2 247 504-765 689-954 (968)
387 KOG1025 Epidermal growth facto 100.0 1.4E-31 3E-36 300.4 16.7 254 506-764 697-959 (1177)
388 PLN03225 Serine/threonine-prot 100.0 8.6E-31 1.9E-35 305.1 21.6 257 502-773 129-459 (566)
389 KOG1027 Serine/threonine prote 100.0 8.7E-32 1.9E-36 304.6 12.1 245 507-767 511-770 (903)
390 KOG1290 Serine/threonine prote 100.0 1.5E-30 3.2E-35 279.3 20.6 254 505-772 78-558 (590)
391 KOG0668 Casein kinase II, alph 100.0 7.6E-32 1.6E-36 264.6 9.7 254 504-775 37-333 (338)
392 KOG0670 U4/U6-associated splic 100.0 6.9E-32 1.5E-36 290.3 8.3 255 501-769 428-751 (752)
393 PLN03224 probable serine/threo 100.0 3.5E-30 7.6E-35 293.5 22.3 258 503-768 143-504 (507)
394 KOG1024 Receptor-like protein 100.0 4.1E-30 8.9E-35 268.9 20.8 262 501-766 280-559 (563)
395 KOG0984 Mitogen-activated prot 100.0 9.3E-31 2E-35 253.7 11.8 215 500-718 41-266 (282)
396 KOG1165 Casein kinase (serine/ 100.0 2.9E-29 6.4E-34 258.3 22.5 257 502-765 25-302 (449)
397 KOG0665 Jun-N-terminal kinase 100.0 1.1E-30 2.3E-35 268.4 11.4 251 504-768 16-314 (369)
398 KOG0664 Nemo-like MAPK-related 100.0 2.4E-31 5.3E-36 266.5 2.6 249 506-758 54-343 (449)
399 cd00180 PKc Catalytic domain o 100.0 3E-28 6.5E-33 244.0 22.6 210 513-758 1-214 (215)
400 KOG0576 Mitogen-activated prot 100.0 2.5E-30 5.3E-35 286.0 6.7 251 502-757 12-270 (829)
401 KOG1152 Signal transduction se 100.0 1.6E-29 3.5E-34 275.3 10.7 199 504-707 560-771 (772)
402 smart00221 STYKc Protein kinas 99.9 1.4E-26 3.1E-31 236.4 22.1 202 507-711 1-207 (225)
403 KOG1163 Casein kinase (serine/ 99.9 3.4E-26 7.3E-31 226.6 17.5 257 501-764 11-286 (341)
404 KOG1345 Serine/threonine kinas 99.9 1.8E-27 3.9E-32 239.1 8.5 244 504-757 23-283 (378)
405 KOG1164 Casein kinase (serine/ 99.9 3.1E-25 6.7E-30 242.2 23.5 255 506-765 19-300 (322)
406 PLN00181 protein SPA1-RELATED; 99.9 1.1E-26 2.3E-31 283.0 11.1 200 559-770 29-271 (793)
407 KOG1167 Serine/threonine prote 99.9 1.5E-26 3.2E-31 246.3 10.3 252 501-768 32-385 (418)
408 smart00750 KIND kinase non-cat 99.9 2.8E-25 6.1E-30 220.0 14.8 163 587-764 1-171 (176)
409 COG0515 SPS1 Serine/threonine 99.9 8.9E-23 1.9E-27 216.5 27.4 249 507-758 2-275 (384)
410 KOG0590 Checkpoint kinase and 99.9 1.7E-24 3.8E-29 252.0 5.3 259 508-776 321-597 (601)
411 PRK09188 serine/threonine prot 99.9 7.4E-23 1.6E-27 224.5 16.4 167 501-681 14-196 (365)
412 KOG0195 Integrin-linked kinase 99.9 1.8E-23 3.9E-28 210.1 8.1 252 505-763 190-447 (448)
413 KOG0603 Ribosomal protein S6 k 99.9 3.8E-24 8.3E-29 238.3 2.1 242 512-771 1-250 (612)
414 PRK10359 lipopolysaccharide co 99.8 3.6E-21 7.9E-26 197.3 11.5 175 501-699 27-216 (232)
415 KOG4158 BRPK/PTEN-induced prot 99.8 1E-20 2.2E-25 199.3 12.7 255 499-758 151-510 (598)
416 KOG1240 Protein kinase contain 99.8 4.6E-21 1E-25 222.6 9.2 260 506-773 24-315 (1431)
417 PF14531 Kinase-like: Kinase-l 99.8 2.3E-20 5.1E-25 196.8 13.2 233 505-749 12-288 (288)
418 PRK12274 serine/threonine prot 99.8 1.6E-19 3.5E-24 181.6 15.2 187 508-708 5-210 (218)
419 cd05147 RIO1_euk RIO kinase fa 99.8 4.1E-20 8.9E-25 186.4 10.4 141 510-656 2-168 (190)
420 KOG0606 Microtubule-associated 99.8 9.3E-20 2E-24 212.0 9.9 219 505-768 83-319 (1205)
421 cd05145 RIO1_like RIO kinase f 99.8 4.5E-19 9.8E-24 178.8 13.5 141 510-657 2-169 (190)
422 KOG1166 Mitotic checkpoint ser 99.8 1.2E-18 2.6E-23 207.1 17.6 255 499-773 692-964 (974)
423 PRK14879 serine/threonine prot 99.8 2.8E-17 6E-22 168.0 18.1 136 511-654 2-143 (211)
424 PRK10345 hypothetical protein; 99.7 1.1E-17 2.4E-22 170.7 14.1 133 509-650 6-154 (210)
425 TIGR03724 arch_bud32 Kae1-asso 99.7 2.7E-17 5.9E-22 166.6 13.8 133 512-655 1-139 (199)
426 KOG1023 Natriuretic peptide re 99.7 4.4E-17 9.5E-22 182.3 11.7 208 556-764 1-226 (484)
427 PRK09605 bifunctional UGMP fam 99.7 3E-16 6.5E-21 183.0 16.0 139 505-655 333-477 (535)
428 smart00090 RIO RIO-like kinase 99.7 2.4E-16 5.1E-21 164.5 12.8 144 506-656 29-199 (237)
429 PF13426 PAS_9: PAS domain; PD 99.7 7.3E-16 1.6E-20 137.5 14.3 104 140-243 1-104 (104)
430 cd05144 RIO2_C RIO kinase fami 99.7 5.2E-16 1.1E-20 157.4 12.0 138 506-656 16-176 (198)
431 KOG1033 eIF-2alpha kinase PEK/ 99.6 9.4E-17 2E-21 176.5 6.2 166 576-753 330-507 (516)
432 KOG0590 Checkpoint kinase and 99.6 1.5E-17 3.3E-22 194.0 -2.7 248 506-755 21-283 (601)
433 PF08448 PAS_4: PAS fold; Int 99.6 1.4E-14 3E-19 130.8 13.9 110 136-246 1-110 (110)
434 cd05119 RIO RIO kinase family, 99.6 5.1E-15 1.1E-19 148.2 11.9 138 510-657 2-166 (187)
435 PRK01723 3-deoxy-D-manno-octul 99.6 1.2E-14 2.5E-19 152.0 14.2 136 511-654 37-191 (239)
436 cd05120 APH_ChoK_like Aminogly 99.6 1.1E-14 2.5E-19 138.6 12.5 135 509-655 2-139 (155)
437 PF00989 PAS: PAS fold; Inter 99.6 2E-14 4.4E-19 130.4 13.4 112 130-241 1-113 (113)
438 PRK11091 aerobic respiration c 99.5 1.6E-13 3.4E-18 167.6 17.4 150 129-287 154-303 (779)
439 KOG0601 Cyclin-dependent kinas 99.5 4.5E-14 9.8E-19 158.3 10.2 246 504-756 113-377 (524)
440 PRK13557 histidine kinase; Pro 99.5 4.5E-13 9.8E-18 155.9 17.0 150 129-285 29-181 (540)
441 PRK13559 hypothetical protein; 99.5 6.1E-13 1.3E-17 147.4 16.8 144 129-285 42-188 (361)
442 KOG1243 Protein kinase [Genera 99.4 5E-12 1.1E-16 143.1 17.4 222 527-762 36-263 (690)
443 COG4248 Uncharacterized protei 99.4 1.9E-11 4.1E-16 131.1 17.9 260 506-774 12-312 (637)
444 KOG0606 Microtubule-associated 99.3 6.1E-13 1.3E-17 155.9 5.3 251 500-753 799-1084(1205)
445 TIGR01982 UbiB 2-polyprenylphe 99.3 7.2E-12 1.6E-16 142.1 12.8 147 504-656 117-308 (437)
446 KOG1266 Protein kinase [Signal 99.3 2.6E-12 5.7E-17 133.6 6.6 199 554-758 119-331 (458)
447 PRK04750 ubiB putative ubiquin 99.3 3.3E-12 7.2E-17 146.7 8.0 146 501-656 116-315 (537)
448 KOG0601 Cyclin-dependent kinas 99.3 2.3E-12 5.1E-17 144.7 6.2 246 503-758 263-514 (524)
449 cd05151 ChoK Choline Kinase (C 99.3 9.7E-12 2.1E-16 122.2 9.7 129 510-653 3-135 (170)
450 TIGR02938 nifL_nitrog nitrogen 99.3 2.4E-11 5.2E-16 139.3 12.3 126 129-254 3-128 (494)
451 TIGR00229 sensory_box PAS doma 99.2 1.1E-10 2.4E-15 101.7 13.3 120 130-250 3-123 (124)
452 PRK13560 hypothetical protein; 99.2 1.4E-10 3.1E-15 141.7 16.6 127 129-255 203-331 (807)
453 PRK10060 RNase II stability mo 99.2 2.7E-10 5.8E-15 136.5 17.8 133 129-262 110-244 (663)
454 COG3642 Mn2+-dependent serine/ 99.2 1.7E-10 3.8E-15 112.6 12.8 133 511-654 2-140 (204)
455 cd05146 RIO3_euk RIO kinase fa 99.2 1.6E-10 3.4E-15 116.5 12.3 138 511-657 3-176 (197)
456 TIGR02040 PpsR-CrtJ transcript 99.2 2.1E-10 4.6E-15 130.9 15.0 114 131-248 253-368 (442)
457 PRK11073 glnL nitrogen regulat 99.2 1.5E-10 3.1E-15 127.5 13.2 144 129-286 6-149 (348)
458 PRK13558 bacterio-opsin activa 99.2 3.4E-10 7.3E-15 136.0 17.1 127 130-256 148-277 (665)
459 KOG3087 Serine/threonine prote 99.1 8E-10 1.7E-14 107.5 13.1 145 509-655 11-166 (229)
460 PRK09776 putative diguanylate 99.1 1.3E-09 2.9E-14 138.1 18.3 134 128-261 534-671 (1092)
461 PRK09776 putative diguanylate 99.1 4.6E-10 1E-14 142.2 13.8 129 128-256 281-410 (1092)
462 TIGR02966 phoR_proteo phosphat 99.1 7.3E-10 1.6E-14 120.1 13.4 128 129-285 5-132 (333)
463 PRK11360 sensory histidine kin 99.1 1.8E-09 3.8E-14 127.0 17.2 146 130-285 262-408 (607)
464 cd05154 ACAD10_11_like Acyl-Co 99.1 9.7E-10 2.1E-14 112.5 11.7 141 511-654 4-206 (223)
465 PF13596 PAS_10: PAS domain; P 99.0 2.3E-09 5E-14 97.3 10.6 106 132-242 1-106 (106)
466 COG5002 VicK Signal transducti 99.0 7.9E-09 1.7E-13 108.5 13.9 132 130-284 111-242 (459)
467 PRK11359 cyclic-di-GMP phospho 99.0 5.5E-09 1.2E-13 128.0 14.6 125 129-253 135-260 (799)
468 PRK13560 hypothetical protein; 98.9 8.7E-09 1.9E-13 126.1 15.1 146 132-286 475-624 (807)
469 cd00130 PAS PAS domain; PAS mo 98.9 3.1E-08 6.7E-13 81.7 13.8 102 140-241 2-103 (103)
470 PF08447 PAS_3: PAS fold; Int 98.9 1.4E-08 3.1E-13 88.8 11.3 86 152-238 1-91 (91)
471 PRK15123 lipopolysaccharide co 98.9 2.3E-08 5.1E-13 106.0 13.9 138 513-653 30-193 (268)
472 COG3829 RocR Transcriptional r 98.9 1.7E-08 3.6E-13 112.9 12.9 116 130-254 117-232 (560)
473 KOG3741 Poly(A) ribonuclease s 98.9 8.3E-08 1.8E-12 106.2 18.1 212 517-758 288-521 (655)
474 KOG2137 Protein kinase [Signal 98.8 2.1E-09 4.5E-14 122.7 4.5 145 611-756 107-263 (700)
475 PRK11086 sensory histidine kin 98.8 1E-07 2.2E-12 111.3 17.4 136 130-287 221-359 (542)
476 PF01163 RIO1: RIO1 family; I 98.8 5.7E-08 1.2E-12 97.5 11.5 127 520-656 1-157 (188)
477 PRK10820 DNA-binding transcrip 98.7 6.1E-08 1.3E-12 112.6 12.7 106 130-245 80-189 (520)
478 PRK11006 phoR phosphate regulo 98.7 6.2E-08 1.3E-12 110.2 12.2 127 129-286 97-223 (430)
479 PRK11359 cyclic-di-GMP phospho 98.7 9.4E-08 2E-12 117.2 14.0 124 129-254 11-138 (799)
480 PF12860 PAS_7: PAS fold 98.7 6.9E-08 1.5E-12 88.9 8.7 105 136-249 1-115 (115)
481 TIGR02040 PpsR-CrtJ transcript 98.6 2.8E-07 6.1E-12 105.3 13.3 118 129-251 132-250 (442)
482 COG0478 RIO-like serine/threon 98.6 3E-07 6.4E-12 95.3 10.5 135 507-653 93-250 (304)
483 PF06293 Kdo: Lipopolysacchari 98.5 1E-06 2.2E-11 90.1 13.2 105 547-654 56-170 (206)
484 TIGR02938 nifL_nitrog nitrogen 98.5 1.6E-07 3.5E-12 107.6 5.9 153 129-286 129-295 (494)
485 PRK09902 hypothetical protein; 98.4 3.7E-06 8E-11 85.3 13.6 138 514-653 27-178 (216)
486 COG3852 NtrB Signal transducti 98.4 3.2E-06 7E-11 88.1 12.9 137 133-282 10-147 (363)
487 PF06176 WaaY: Lipopolysacchar 98.4 4.2E-06 9.1E-11 85.2 13.0 140 502-653 28-182 (229)
488 TIGR02172 Fb_sc_TIGR02172 Fibr 98.4 4E-06 8.8E-11 87.0 13.2 136 511-653 7-181 (226)
489 PF01636 APH: Phosphotransfera 98.3 3.1E-06 6.7E-11 87.0 11.3 140 510-653 2-196 (239)
490 COG3290 CitA Signal transducti 98.3 2.4E-06 5.3E-11 95.8 10.9 114 132-256 217-332 (537)
491 KOG0501 K+-channel KCNQ [Inorg 98.3 2.2E-06 4.7E-11 94.9 9.9 117 130-246 14-138 (971)
492 COG0661 AarF Predicted unusual 98.3 2.7E-06 5.9E-11 97.7 9.8 151 501-656 122-316 (517)
493 KOG0576 Mitogen-activated prot 98.2 1.7E-07 3.7E-12 106.0 -0.6 234 511-767 248-487 (829)
494 PRK15053 dpiB sensor histidine 98.2 1.9E-05 4.2E-10 92.6 16.4 114 130-256 222-337 (545)
495 cd05150 APH Aminoglycoside 3'- 98.2 1.9E-05 4.1E-10 82.7 12.8 136 513-653 6-192 (244)
496 PF14598 PAS_11: PAS domain; P 98.1 3.6E-05 7.8E-10 70.6 12.7 95 145-239 7-104 (111)
497 PRK09959 hybrid sensory histid 98.1 2.1E-05 4.5E-10 101.1 14.4 155 130-287 576-732 (1197)
498 COG1718 RIO1 Serine/threonine 98.1 2.4E-05 5.3E-10 80.5 11.6 138 512-658 55-219 (268)
499 PRK11388 DNA-binding transcrip 98.1 2.3E-05 4.9E-10 93.9 12.4 107 133-247 206-312 (638)
500 COG2202 AtoS FOG: PAS/PAC doma 98.1 7E-05 1.5E-09 71.3 13.6 116 131-247 113-231 (232)
No 1
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-49 Score=416.20 Aligned_cols=260 Identities=31% Similarity=0.482 Sum_probs=231.5
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc-
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR- 576 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~- 576 (782)
..+...+++.++.||+|..|+|||+.++ ++-+|+|++ .........+++.+|+++++.++|||||.+|++|..+..
T Consensus 74 ~~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I-~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~ 152 (364)
T KOG0581|consen 74 NGISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVI-LLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEE 152 (364)
T ss_pred cccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEee-cccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCce
Confidence 3456678888999999999999999996 666999999 445567788899999999999999999999999999995
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhc-CCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~-~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
++|+||||++|+|.+++... .++++.....++.+|++||.|||. ++ ||||||||+||||+..|.|||||||.+...
T Consensus 153 isI~mEYMDgGSLd~~~k~~-g~i~E~~L~~ia~~VL~GL~YLh~~~~--IIHRDIKPsNlLvNskGeVKicDFGVS~~l 229 (364)
T KOG0581|consen 153 ISICMEYMDGGSLDDILKRV-GRIPEPVLGKIARAVLRGLSYLHEERK--IIHRDIKPSNLLVNSKGEVKICDFGVSGIL 229 (364)
T ss_pred EEeehhhcCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhccC--eeeccCCHHHeeeccCCCEEeccccccHHh
Confidence 99999999999999999865 469999999999999999999996 66 999999999999999999999999999877
Q ss_pred ccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCC-----ChHHHHHHhhccccccCCCCC-
Q 003978 656 HETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNL-----NSMQVIGAVGFMNQRLEIPKD- 729 (782)
Q Consensus 656 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~-----~~~~~~~~i~~~~~~~~~p~~- 729 (782)
... ...+++||..|||||.+.+..|+.++||||||++++||.+|++||... ...+.+..|. ....+.+|..
T Consensus 230 vnS--~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv-~~ppP~lP~~~ 306 (364)
T KOG0581|consen 230 VNS--IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIV-DEPPPRLPEGE 306 (364)
T ss_pred hhh--hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHh-cCCCCCCCccc
Confidence 665 445789999999999999999999999999999999999999999874 5566666664 3456777776
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 730 VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 730 ~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
+++++++||..||++||.+||++.+| +.|+|++....
T Consensus 307 fS~ef~~FV~~CL~Kdp~~R~s~~qL------l~Hpfi~~~~~ 343 (364)
T KOG0581|consen 307 FSPEFRSFVSCCLRKDPSERPSAKQL------LQHPFIKKFED 343 (364)
T ss_pred CCHHHHHHHHHHhcCCcccCCCHHHH------hcCHHHhhccc
Confidence 99999999999999999999999999 67888876544
No 2
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.6e-48 Score=426.73 Aligned_cols=254 Identities=28% Similarity=0.490 Sum_probs=235.7
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
.+|+.++.||+|+|..||.++. .|..||+|++.+... .....+++.+||+|.+.|+|||||++|++|++.+++|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 6899999999999999999987 788899999987654 4466788999999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
|+|..++|..++++ ..++++..++.++.||+.||.|||+++ |||||||..|+||+++.+|||+|||+|.....+...
T Consensus 98 ELC~~~sL~el~Kr-rk~ltEpEary~l~QIv~GlkYLH~~~--IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Er 174 (592)
T KOG0575|consen 98 ELCHRGSLMELLKR-RKPLTEPEARYFLRQIVEGLKYLHSLG--IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGER 174 (592)
T ss_pred EecCCccHHHHHHh-cCCCCcHHHHHHHHHHHHHHHHHHhcC--ceecccchhheeecCcCcEEecccceeeeecCcccc
Confidence 99999999999984 568999999999999999999999999 999999999999999999999999999988877677
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHh
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 741 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~c 741 (782)
..+.+|||.|.|||++....++..+||||+||+||-||+|++||...+-.+.+..|. .....+|..++.++++||.+|
T Consensus 175 k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik--~~~Y~~P~~ls~~A~dLI~~l 252 (592)
T KOG0575|consen 175 KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIK--LNEYSMPSHLSAEAKDLIRKL 252 (592)
T ss_pred cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHH--hcCcccccccCHHHHHHHHHH
Confidence 778999999999999999999999999999999999999999999998888888884 456677889999999999999
Q ss_pred hhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 742 WHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 742 L~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
|.+||.+|||++++ |.|+||+.
T Consensus 253 L~~~P~~Rpsl~~v------L~h~Ff~~ 274 (592)
T KOG0575|consen 253 LRPNPSERPSLDEV------LDHPFFKS 274 (592)
T ss_pred hcCCcccCCCHHHH------hcCHhhhC
Confidence 99999999999999 78899943
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-47 Score=419.20 Aligned_cols=275 Identities=49% Similarity=0.819 Sum_probs=249.8
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEcCCe-EEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC-
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGSD-VAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ- 575 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~-vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~- 575 (782)
..+.+...++.+.+.||.|+||+||++.+.|+. ||+|++..........+.|.+|+.+|..++|||||+|+|++..+.
T Consensus 34 ~~~~i~~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~ 113 (362)
T KOG0192|consen 34 PEEEIDPDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPG 113 (362)
T ss_pred cceecChHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 445666777888888999999999999999999 999999887776666889999999999999999999999999887
Q ss_pred ceeEEEeecCCCCHHHHHhh-cCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC-cEEEEecCCCc
Q 003978 576 RLCIVTEFLPRGSLFRLLQR-NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW-TVKVGDFGLSR 653 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~-~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~-~vkL~DFGla~ 653 (782)
.++|||||+++|+|.+++.. ....+++..++.++.||++||.|||++++ ||||||||+||||+.++ ++||+|||+++
T Consensus 114 ~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~-iIHrDLK~~NiLv~~~~~~~KI~DFGlsr 192 (362)
T KOG0192|consen 114 SLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP-IIHRDLKSDNILVDLKGKTLKIADFGLSR 192 (362)
T ss_pred ceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC-eeecccChhhEEEcCCCCEEEECCCccce
Confidence 79999999999999999987 46789999999999999999999999875 99999999999999998 99999999998
Q ss_pred ccccccccccCCCCCCcccCccccc--CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCC
Q 003978 654 LKHETYLTTKTGKGTPQWMAPEVLR--NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVD 731 (782)
Q Consensus 654 ~~~~~~~~~~~~~Gt~~y~aPE~l~--~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~ 731 (782)
.............||+.|||||++. ...|+.|+||||||++||||+||+.||......++...+.....++.+|..++
T Consensus 193 ~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~ 272 (362)
T KOG0192|consen 193 EKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECP 272 (362)
T ss_pred eeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCC
Confidence 7776543444468999999999999 56899999999999999999999999999999888888888888999999999
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 732 PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 732 ~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
+.+..||.+||..||..||++.+++..|+.+...+.......
T Consensus 273 ~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~~~~~~ 314 (362)
T KOG0192|consen 273 PHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISSAGPED 314 (362)
T ss_pred HHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcccCccc
Confidence 999999999999999999999999999999988877544443
No 4
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-48 Score=405.05 Aligned_cols=258 Identities=26% Similarity=0.428 Sum_probs=230.2
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCH-HHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
..++|+++++||+|+||+||.++. +++-||+|++++..... ........|..+|..++||+||.++..|++..++|+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 357899999999999999999987 46679999998876643 456778899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
|+||+.||.|+.+|++.+ .+++..+..++.+|+.||.|||++| ||||||||+||||+.+|+|+|+|||+++......
T Consensus 103 Vld~~~GGeLf~hL~~eg-~F~E~~arfYlaEi~lAL~~LH~~g--IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~ 179 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREG-RFSEDRARFYLAEIVLALGYLHSKG--IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG 179 (357)
T ss_pred EEeccCCccHHHHHHhcC-CcchhHHHHHHHHHHHHHHHHHhCC--eeeccCCHHHeeecCCCcEEEeccccchhcccCC
Confidence 999999999999998754 7999999999999999999999999 9999999999999999999999999999777777
Q ss_pred ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHH
Q 003978 660 LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVE 739 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~ 739 (782)
..+.+.+||+.|||||++.+..|+..+|+|||||++|+|++|.+||...+....+..+.... .+..|..++.+.++||.
T Consensus 180 ~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k-~~~~p~~ls~~ardll~ 258 (357)
T KOG0598|consen 180 DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK-LPLPPGYLSEEARDLLK 258 (357)
T ss_pred CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc-CCCCCccCCHHHHHHHH
Confidence 77778999999999999999999999999999999999999999999999988888885322 35566679999999999
Q ss_pred HhhhhCCCCCC----CHHHHHHHHHHHHHHHhhcc
Q 003978 740 SCWHSDPQCRP----SFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 740 ~cL~~dP~~RP----s~~ell~~L~~L~~~~~~~~ 770 (782)
++|.+||++|. ++.++ -.|+||+.+
T Consensus 259 ~LL~rdp~~RLg~~~d~~~i------k~HpfF~~i 287 (357)
T KOG0598|consen 259 KLLKRDPRQRLGGPGDAEEI------KRHPFFKGI 287 (357)
T ss_pred HHhccCHHHhcCCCCChHHh------hcCcccccC
Confidence 99999999995 45554 246777543
No 5
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-48 Score=411.78 Aligned_cols=260 Identities=26% Similarity=0.398 Sum_probs=221.8
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHH-----HHHHHHHHHHHHHhCCCCceeEEeeeeecC
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDE-----VIHSFRQEVSLMKRLRHPNVLLFMGAVTSP 574 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~-----~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~ 574 (782)
...+.|.+.+.||+|+||.|.+|.. .++.||||++++...... ......+|+++|++|.|||||+++++|+.+
T Consensus 169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ 248 (475)
T KOG0615|consen 169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVP 248 (475)
T ss_pred hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecC
Confidence 3567899999999999999999986 578899999987654331 123356899999999999999999999999
Q ss_pred CceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC---CcEEEEecCC
Q 003978 575 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH---WTVKVGDFGL 651 (782)
Q Consensus 575 ~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~---~~vkL~DFGl 651 (782)
...||||||+.||+|++.+-.++ .+.+.....+++||+.|+.|||++| |+||||||+|||++.+ ..+||+|||+
T Consensus 249 ds~YmVlE~v~GGeLfd~vv~nk-~l~ed~~K~~f~Qll~avkYLH~~G--I~HRDiKPeNILl~~~~e~~llKItDFGl 325 (475)
T KOG0615|consen 249 DSSYMVLEYVEGGELFDKVVANK-YLREDLGKLLFKQLLTAVKYLHSQG--IIHRDIKPENILLSNDAEDCLLKITDFGL 325 (475)
T ss_pred CceEEEEEEecCccHHHHHHhcc-ccccchhHHHHHHHHHHHHHHHHcC--cccccCCcceEEeccCCcceEEEecccch
Confidence 99999999999999999997754 5888888999999999999999999 9999999999999866 7899999999
Q ss_pred CcccccccccccCCCCCCcccCcccccCCCC---CchhHHHHHHHHHHHHHcCCCCCCCCChHH-HHHHhhcccccc--C
Q 003978 652 SRLKHETYLTTKTGKGTPQWMAPEVLRNEPS---DEKSDVYSFGVILWELATEKIPWDNLNSMQ-VIGAVGFMNQRL--E 725 (782)
Q Consensus 652 a~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~---s~~sDIwSLG~ll~elltG~~Pf~~~~~~~-~~~~i~~~~~~~--~ 725 (782)
|+..++.. ...+.||||.|.|||++.+... ..++|||||||+||-+|+|.+||....... ..++|....... .
T Consensus 326 AK~~g~~s-fm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~ 404 (475)
T KOG0615|consen 326 AKVSGEGS-FMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPL 404 (475)
T ss_pred hhccccce-ehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccCh
Confidence 99887544 4458899999999999987654 347899999999999999999998766555 555664333322 2
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 726 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 726 ~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
....++.+..+||.+||..||++|||+.|+ |+|+||+.++
T Consensus 405 ~w~~Iseea~dlI~~mL~VdP~~R~s~~ea------L~hpW~~~~~ 444 (475)
T KOG0615|consen 405 QWDRISEEALDLINWMLVVDPENRPSADEA------LNHPWFKDAP 444 (475)
T ss_pred hhhhhhHHHHHHHHHhhEeCcccCcCHHHH------hcChhhhccc
Confidence 334688999999999999999999999999 7899999765
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-46 Score=397.09 Aligned_cols=258 Identities=26% Similarity=0.491 Sum_probs=228.2
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
..+|.+.+.||+|+|++||+|++ .+..||||.+.+..+..+..+.+..|+++|+.++|||||++++++..++.+||||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 35899999999999999999998 4677999999998888888899999999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC------CcEEEEecCCCccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH------WTVKVGDFGLSRLK 655 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~------~~vkL~DFGla~~~ 655 (782)
|||+||+|.+||.+.+ .+++..+..++.||+.||++||+++ ||||||||+||||+.. -.+||+|||+|+..
T Consensus 89 EyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~~~~--IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLHENN--IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 9999999999998754 6999999999999999999999999 9999999999999764 46899999999987
Q ss_pred ccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc-cCCCCCCCHHH
Q 003978 656 HETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR-LEIPKDVDPRW 734 (782)
Q Consensus 656 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~-~~~p~~~~~~l 734 (782)
... ....+.+|+|.|||||++...+|+.|+|+||+|+++|+|++|+.||...+..+....+.+.... +.++..++..+
T Consensus 166 ~~~-~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~ 244 (429)
T KOG0595|consen 166 QPG-SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPL 244 (429)
T ss_pred Cch-hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCch
Confidence 754 3455789999999999999999999999999999999999999999999998888777655443 34445677888
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 735 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 735 ~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
.+|+...|.++|..|-++.+. +.+++....+
T Consensus 245 ~~Ll~~ll~~~~~~~~~~~~~------~~~~~l~~~p 275 (429)
T KOG0595|consen 245 RELLISLLQRNPKDRISFEDF------FDHPFLAANP 275 (429)
T ss_pred hhhhhHHHhcCccccCchHHh------hhhhhcccCc
Confidence 899999999999999988877 4455554433
No 7
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.7e-47 Score=384.84 Aligned_cols=256 Identities=25% Similarity=0.419 Sum_probs=223.9
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeee-eecCC-ce
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGA-VTSPQ-RL 577 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~-~~~~~-~~ 577 (782)
....+|++.++||+|+||.||++.+ .+..+|.|.+.....+....+.+..|+.+|++|+|||||+++++ +..++ .+
T Consensus 16 ~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evl 95 (375)
T KOG0591|consen 16 KTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVL 95 (375)
T ss_pred ccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhh
Confidence 3456899999999999999999986 67789999998777788888999999999999999999999994 44444 48
Q ss_pred eEEEeecCCCCHHHHHh---hcCCcchHHHHHHHHHHHHHHHHhhhcCCCC--eeecCCCCCcEEEcCCCcEEEEecCCC
Q 003978 578 CIVTEFLPRGSLFRLLQ---RNTTKLDWRRRILMALDIARGVSYLHHCNPP--IIHRDLKSSNLLVDKHWTVKVGDFGLS 652 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~---~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~--ivHrDIKp~NILl~~~~~vkL~DFGla 652 (782)
+|+||||.+|+|..+++ +....+++..+|+++.|++.||..+|..-+. |+||||||.||+|+.+|.|||+|||++
T Consensus 96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~ 175 (375)
T KOG0591|consen 96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLG 175 (375)
T ss_pred HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhH
Confidence 99999999999999985 3456799999999999999999999984344 999999999999999999999999999
Q ss_pred cccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC-CCCC
Q 003978 653 RLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP-KDVD 731 (782)
Q Consensus 653 ~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p-~~~~ 731 (782)
+..........+.+|||.||+||++.+.+|+.++|||||||++|||+.-.+||.+.+-.....+|... .-+++| ..++
T Consensus 176 r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qg-d~~~~p~~~YS 254 (375)
T KOG0591|consen 176 RFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQG-DYPPLPDEHYS 254 (375)
T ss_pred hHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcC-CCCCCcHHHhh
Confidence 98877666666789999999999999999999999999999999999999999999888888888644 233455 6789
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003978 732 PRWAAIVESCWHSDPQCRPSFQELVDK 758 (782)
Q Consensus 732 ~~l~~LI~~cL~~dP~~RPs~~ell~~ 758 (782)
.++..||..|+..||+.||+...++..
T Consensus 255 ~~l~~li~~ci~vd~~~RP~t~~~v~d 281 (375)
T KOG0591|consen 255 TDLRELINMCIAVDPEQRPDTVPYVQD 281 (375)
T ss_pred hHHHHHHHHHccCCcccCCCcchHHHH
Confidence 999999999999999999985444333
No 8
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-45 Score=398.14 Aligned_cols=257 Identities=25% Similarity=0.458 Sum_probs=228.4
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCce
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 577 (782)
....+|++++.||+|+|++||+|+. .++.||||++.+.-. .+...+-+.+|-..|..| .||.||+||..|.++..+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 3457999999999999999999987 567899999976544 334455677899999999 899999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|+|+||+++|+|.++|.+. +.|++.-+.+++.+|+.||+|||++| ||||||||+||||+.++++||+|||.|+....
T Consensus 150 YFvLe~A~nGdll~~i~K~-Gsfde~caR~YAAeIldAleylH~~G--IIHRDlKPENILLd~dmhikITDFGsAK~l~~ 226 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKY-GSFDETCARFYAAEILDALEYLHSNG--IIHRDLKPENILLDKDGHIKITDFGSAKILSP 226 (604)
T ss_pred EEEEEecCCCcHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHHhcC--ceeccCChhheeEcCCCcEEEeeccccccCCh
Confidence 9999999999999999875 47999999999999999999999999 99999999999999999999999999986543
Q ss_pred ccc-----------cc--cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc
Q 003978 658 TYL-----------TT--KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL 724 (782)
Q Consensus 658 ~~~-----------~~--~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~ 724 (782)
... .. .+++||..|.+||++.....+..+|||+|||+||+|+.|.+||...+....++.|. ....
T Consensus 227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~--~l~y 304 (604)
T KOG0592|consen 227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQ--ALDY 304 (604)
T ss_pred hhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHH--Hhcc
Confidence 211 12 45789999999999999999999999999999999999999999999988888874 4567
Q ss_pred CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 725 EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 725 ~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
.+|+.+++.+++||+++|..||.+|++.++| -+|+||..
T Consensus 305 ~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qI------k~HpFF~~ 343 (604)
T KOG0592|consen 305 EFPEGFPEDARDLIKKLLVRDPSDRLTSQQI------KAHPFFEG 343 (604)
T ss_pred cCCCCCCHHHHHHHHHHHccCccccccHHHH------hhCccccc
Confidence 8899999999999999999999999999998 46788854
No 9
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=7.4e-46 Score=376.33 Aligned_cols=254 Identities=24% Similarity=0.375 Sum_probs=221.0
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
+.|+.+.++|+|+||+||+|++ +|+-||||.|.....++...+-..+|+++|++++|+|+|.++++|.....++||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 5788899999999999999987 57789999998777667777888999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
||+. ++.+-|......++.+.+..++.|++.|+.|+|+++ +|||||||+||||+.+|.+||||||+|+....+....
T Consensus 82 ~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n--~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~Y 158 (396)
T KOG0593|consen 82 YCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNN--CIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNY 158 (396)
T ss_pred ecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcC--eecccCChhheEEecCCcEEeccchhhHhhcCCcchh
Confidence 9976 777888888888999999999999999999999999 9999999999999999999999999999877555555
Q ss_pred cCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc-----------------
Q 003978 663 KTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL----------------- 724 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~----------------- 724 (782)
...+.|.+|+|||++.| .+|+..+|||++||++.||++|.+-|.+....+.+..|....+..
T Consensus 159 TDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv 238 (396)
T KOG0593|consen 159 TDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGV 238 (396)
T ss_pred hhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeee
Confidence 56678999999999998 778999999999999999999999999888776665543211100
Q ss_pred CCC------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 725 EIP------------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 725 ~~p------------~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
.+| +.++.-+.+|++.||..||.+|++-+++ |.|+||
T Consensus 239 ~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~ql------l~H~yF 287 (396)
T KOG0593|consen 239 RLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQL------LHHPYF 287 (396)
T ss_pred ecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHH------hcChHH
Confidence 111 2345678999999999999999999999 567777
No 10
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-45 Score=372.90 Aligned_cols=254 Identities=24% Similarity=0.443 Sum_probs=229.4
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
....+|++++.||.|+||.|.+++. .+..+|+|+++++.. ...+.+-..+|..+|+.+.||+++++++.|.+...+|
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly 120 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY 120 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence 4457899999999999999999987 466799999988765 4466778889999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
|||||++||.|+.++++.+ +|++..+.+++.||+.||+|||+++ |++|||||+||||+++|.+||+|||+|+.....
T Consensus 121 mvmeyv~GGElFS~Lrk~~-rF~e~~arFYAAeivlAleylH~~~--iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 121 MVMEYVPGGELFSYLRKSG-RFSEPHARFYAAEIVLALEYLHSLD--IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR 197 (355)
T ss_pred EEEeccCCccHHHHHHhcC-CCCchhHHHHHHHHHHHHHHHHhcC--eeeccCChHHeeeccCCcEEEEeccceEEecCc
Confidence 9999999999999998754 7999999999999999999999999 999999999999999999999999999876554
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 738 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI 738 (782)
+.+.||||.|+|||++...+|+.++|+|+|||++|||+.|.+||...+..+.+++| ......+|..+++++++||
T Consensus 198 ---T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI--~~~~v~fP~~fs~~~kdLl 272 (355)
T KOG0616|consen 198 ---TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKI--LEGKVKFPSYFSSDAKDLL 272 (355)
T ss_pred ---EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHH--HhCcccCCcccCHHHHHHH
Confidence 44779999999999999999999999999999999999999999999999998888 5567889999999999999
Q ss_pred HHhhhhCCCCCC-----CHHHHHHHHHHHHHHHhhc
Q 003978 739 ESCWHSDPQCRP-----SFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 739 ~~cL~~dP~~RP-----s~~ell~~L~~L~~~~~~~ 769 (782)
+++|+.|-.+|. ...+| ..|+||+.
T Consensus 273 ~~LL~vD~t~R~gnlknG~~dI------k~H~wF~~ 302 (355)
T KOG0616|consen 273 KKLLQVDLTKRFGNLKNGVEDI------KNHPWFKG 302 (355)
T ss_pred HHHHhhhhHhhhcCcCCCcccc------ccCccccc
Confidence 999999999993 44455 35788854
No 11
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-44 Score=397.69 Aligned_cols=257 Identities=30% Similarity=0.537 Sum_probs=230.1
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCC---HHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCC
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYS---DEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQ 575 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~---~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~ 575 (782)
...+.|.+++.||+|+||+||++.+ .+..||+|++.+.... ....+.+.+|+.+++.++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 4557899999999999999999987 5788999988775222 234567778999999999 999999999999999
Q ss_pred ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC-CcEEEEecCCCcc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH-WTVKVGDFGLSRL 654 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~-~~vkL~DFGla~~ 654 (782)
.+|+|||||.||+|++++.. ..++.+..+..++.||+.|++|||++| |+||||||+|||++.+ +++||+|||++..
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~g--i~HRDLK~ENilld~~~~~~Kl~DFG~s~~ 170 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRG--IVHRDLKPENILLDGNEGNLKLSDFGLSAI 170 (370)
T ss_pred eEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCC--EeeCCCCHHHEEecCCCCCEEEeccccccc
Confidence 99999999999999999988 668999999999999999999999999 9999999999999999 9999999999987
Q ss_pred cccccccccCCCCCCcccCcccccCCC-CC-chhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCC-C
Q 003978 655 KHETYLTTKTGKGTPQWMAPEVLRNEP-SD-EKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDV-D 731 (782)
Q Consensus 655 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~s-~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~-~ 731 (782)
.........+.+||+.|+|||++.+.. |+ .++||||+|++||-|++|..||...+.......+ ......+|..+ +
T Consensus 171 ~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki--~~~~~~~p~~~~S 248 (370)
T KOG0583|consen 171 SPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKI--RKGEFKIPSYLLS 248 (370)
T ss_pred cCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHH--hcCCccCCCCcCC
Confidence 743334566889999999999999977 75 7899999999999999999999998877777775 55677888888 9
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 732 PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 732 ~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
++++.||.+||..||..|+++.++ +.|+||+.
T Consensus 249 ~~~~~Li~~mL~~~P~~R~t~~~i------~~h~w~~~ 280 (370)
T KOG0583|consen 249 PEARSLIEKMLVPDPSTRITLLEI------LEHPWFQK 280 (370)
T ss_pred HHHHHHHHHHcCCCcccCCCHHHH------hhChhhcc
Confidence 999999999999999999999999 67899997
No 12
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2.6e-45 Score=396.87 Aligned_cols=256 Identities=29% Similarity=0.533 Sum_probs=232.4
Q ss_pred cceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
++|.+.+.||+|+||.||||+.+ .+.||||.+.+....++.++.+.+|++|++.++|||||.++++|+...++|+|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 57889999999999999999865 4569999999888888889999999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
||.| +|+.+|... ..++++.+..++.+++.||.|||+++ |+|||+||.|||++..|.+|+||||+|+.+.......
T Consensus 82 ~a~g-~L~~il~~d-~~lpEe~v~~~a~~LVsaL~yLhs~r--ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vl 157 (808)
T KOG0597|consen 82 YAVG-DLFTILEQD-GKLPEEQVRAIAYDLVSALYYLHSNR--ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVL 157 (808)
T ss_pred hhhh-hHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcC--cccccCCcceeeecCCCceeechhhhhhhcccCceee
Confidence 9966 999999875 46999999999999999999999999 9999999999999999999999999999887766566
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhh
Q 003978 663 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCW 742 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL 742 (782)
....|||.|||||++.+.+|+..+|+|||||++|||++|++||......+....| ...+...|..++..+.+|+..+|
T Consensus 158 tsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I--~~d~v~~p~~~S~~f~nfl~gLL 235 (808)
T KOG0597|consen 158 TSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSI--LKDPVKPPSTASSSFVNFLQGLL 235 (808)
T ss_pred eeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHH--hcCCCCCcccccHHHHHHHHHHh
Confidence 6778999999999999999999999999999999999999999887777776666 34556677799999999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 743 HSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 743 ~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
.+||..|.++.++ +.|+|.+....
T Consensus 236 ~kdP~~RltW~~L------l~HpF~k~~~~ 259 (808)
T KOG0597|consen 236 IKDPAQRLTWTDL------LGHPFWKGKIN 259 (808)
T ss_pred hcChhhcccHHHH------hcChHHhhhhh
Confidence 9999999999999 66788765443
No 13
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-44 Score=384.05 Aligned_cols=257 Identities=32% Similarity=0.557 Sum_probs=220.0
Q ss_pred cceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC--ceeEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ--RLCIV 580 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~--~~~lv 580 (782)
.+|..++.||+|+||.||++.+. +..+|||.+....... .+.+.+|+.+|+.++|||||+++|...... .+++.
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~--~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~ 94 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT--SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIF 94 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh--HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEee
Confidence 46788899999999999999985 5889999987763222 678899999999999999999999754444 68999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC-CCcEEEEecCCCccccc--
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-HWTVKVGDFGLSRLKHE-- 657 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~-~~~vkL~DFGla~~~~~-- 657 (782)
|||+++|+|.+++.+.+..+++..+..+..||++||.|||++| ||||||||+||||+. ++.+||+|||++.....
T Consensus 95 mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g--~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 95 MEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKG--IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred eeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 9999999999999887668999999999999999999999999 999999999999999 79999999999986653
Q ss_pred -ccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCC-CChHHHHHHhhccccccCCCCCCCHHH
Q 003978 658 -TYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDN-LNSMQVIGAVGFMNQRLEIPKDVDPRW 734 (782)
Q Consensus 658 -~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~~l 734 (782)
.........||+.|||||++.+ .....++|||||||++.||+||..||.. ......+..+......+.+|..+++++
T Consensus 173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a 252 (313)
T KOG0198|consen 173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEA 252 (313)
T ss_pred ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHH
Confidence 2223445689999999999995 3344599999999999999999999998 455555566665555678999999999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 735 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 735 ~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
++||.+||.+||.+|||+.++ |.|+|.+...
T Consensus 253 ~~Fl~~C~~~~p~~Rpta~eL------L~hpf~~~~~ 283 (313)
T KOG0198|consen 253 KDFLRKCFKRDPEKRPTAEEL------LEHPFLKQNS 283 (313)
T ss_pred HHHHHHHhhcCcccCcCHHHH------hhChhhhccc
Confidence 999999999999999999999 5667765543
No 14
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-43 Score=393.82 Aligned_cols=259 Identities=25% Similarity=0.428 Sum_probs=232.9
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCc
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQR 576 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~ 576 (782)
....++|.++++||+|.||+|+++..+ ++.||||++++... .++.++..+.|.+|+.... ||++++++..|+...+
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~ 443 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH 443 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence 345679999999999999999999985 45699999998765 5667888999999998885 9999999999999999
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
+|+||||+.||++..+.. ...|++.++.+++..|+.||.|||++| |||||||.+|||+|.+|++||+|||+++...
T Consensus 444 l~fvmey~~Ggdm~~~~~--~~~F~e~rarfyaAev~l~L~fLH~~~--IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 444 LFFVMEYVAGGDLMHHIH--TDVFSEPRARFYAAEVVLGLQFLHENG--IIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred EEEEEEecCCCcEEEEEe--cccccHHHHHHHHHHHHHHHHHHHhcC--ceeeecchhheEEcccCcEEecccccccccC
Confidence 999999999999544433 457999999999999999999999999 9999999999999999999999999998766
Q ss_pred cccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHH
Q 003978 657 ETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 736 (782)
Q Consensus 657 ~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~ 736 (782)
-....+.+++|||.|||||++.+..|+.++|+|||||+|||||.|..||.+.+..++...| .......|..++.+..+
T Consensus 520 ~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI--~~d~~~yP~~ls~ea~~ 597 (694)
T KOG0694|consen 520 GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSI--VNDEVRYPRFLSKEAIA 597 (694)
T ss_pred CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH--hcCCCCCCCcccHHHHH
Confidence 5666788999999999999999999999999999999999999999999999999999888 56677889999999999
Q ss_pred HHHHhhhhCCCCCCC-----HHHHHHHHHHHHHHHhhccc
Q 003978 737 IVESCWHSDPQCRPS-----FQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 737 LI~~cL~~dP~~RPs-----~~ell~~L~~L~~~~~~~~~ 771 (782)
+++++|.+||++|.. +.+| .+|+||+.+.
T Consensus 598 il~~ll~k~p~kRLG~~e~d~~~i------~~hpFFr~i~ 631 (694)
T KOG0694|consen 598 IMRRLLRKNPEKRLGSGERDAEDI------KKHPFFRSID 631 (694)
T ss_pred HHHHHhccCcccccCCCCCCchhh------hhCCccccCC
Confidence 999999999999974 5666 4688887664
No 15
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-44 Score=391.03 Aligned_cols=262 Identities=37% Similarity=0.648 Sum_probs=236.2
Q ss_pred cccccccccceeEeeeeccCCcEEEEEEEEcCC-eEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 497 CLDYEILWEDLTIGEQIGQGSCGTVYHAVWYGS-DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 497 ~~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~-~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
...|++..+.+++++.||+|.||.||+|.+++. +||+|.++...... +.|.+|+++|++|+|+|||++++++..++
T Consensus 198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~---~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~ 274 (468)
T KOG0197|consen 198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSP---EAFLREAQIMKKLRHEKLVKLYGVCTKQE 274 (468)
T ss_pred cCCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccCh---hHHHHHHHHHHhCcccCeEEEEEEEecCC
Confidence 346677788899999999999999999999887 89999998765543 46779999999999999999999999988
Q ss_pred ceeEEEeecCCCCHHHHHhh-cCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 576 RLCIVTEFLPRGSLFRLLQR-NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~-~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
.+|||||||..|+|.++|+. .+..+.....+.++.|||+||+||++++ +|||||-+.||||+.+..+||+|||+|+.
T Consensus 275 piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~--~IHRDLAARNiLV~~~~~vKIsDFGLAr~ 352 (468)
T KOG0197|consen 275 PIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN--YIHRDLAARNILVDEDLVVKISDFGLARL 352 (468)
T ss_pred ceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC--ccchhhhhhheeeccCceEEEcccccccc
Confidence 99999999999999999986 5677899999999999999999999999 99999999999999999999999999996
Q ss_pred cccccc-cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCH
Q 003978 655 KHETYL-TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDP 732 (782)
Q Consensus 655 ~~~~~~-~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~ 732 (782)
..+... ......-+..|+|||.+....++.|||||||||+||||+| |+.||.++...+++..+. .+.+++.|..||+
T Consensus 353 ~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le-~GyRlp~P~~CP~ 431 (468)
T KOG0197|consen 353 IGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLE-RGYRLPRPEGCPD 431 (468)
T ss_pred cCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHh-ccCcCCCCCCCCH
Confidence 555443 3334445679999999999999999999999999999999 999999999999998885 5678889999999
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 733 RWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 733 ~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
++.+++..||..+|++|||+..+...|+++..
T Consensus 432 ~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 432 EVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred HHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 99999999999999999999999888877654
No 16
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-43 Score=375.04 Aligned_cols=264 Identities=29% Similarity=0.509 Sum_probs=227.3
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 576 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 576 (782)
.|-...++|++.++||.|..++||+|++ .+..||||++..+++..+ +..+.+|+..|..++||||+.++..|..+..
T Consensus 20 ~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~ 98 (516)
T KOG0582|consen 20 EFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVVDSE 98 (516)
T ss_pred cCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEecce
Confidence 3445567899999999999999999998 577899999998887666 7899999999999999999999999999999
Q ss_pred eeEEEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
+|+||.||.+|++.++++.. ...+++..+..|++++++||.|||++| .||||||+.||||+.+|.|||+|||.+...
T Consensus 99 LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G--~IHRdvKAgnILi~~dG~VkLadFgvsa~l 176 (516)
T KOG0582|consen 99 LWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG--HIHRDVKAGNILIDSDGTVKLADFGVSASL 176 (516)
T ss_pred eEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC--ceecccccccEEEcCCCcEEEcCceeeeee
Confidence 99999999999999999653 445899999999999999999999999 999999999999999999999999987654
Q ss_pred ccccccc----cCCCCCCcccCcccccC--CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccC----
Q 003978 656 HETYLTT----KTGKGTPQWMAPEVLRN--EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE---- 725 (782)
Q Consensus 656 ~~~~~~~----~~~~Gt~~y~aPE~l~~--~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~---- 725 (782)
.+..... .+.+|||.|||||++.. ..|+.|+|||||||+.+||.+|..||..+.+.+++-.. .+..++
T Consensus 177 ~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~t--Lqn~pp~~~t 254 (516)
T KOG0582|consen 177 FDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLT--LQNDPPTLLT 254 (516)
T ss_pred cccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHH--hcCCCCCccc
Confidence 4433222 45689999999999643 55889999999999999999999999999998876443 222221
Q ss_pred ------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 726 ------IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 726 ------~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
..+.++..++.||..||.+||.+|||+.++ |.|.|||.....
T Consensus 255 ~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskL------lkh~FFk~~k~~ 302 (516)
T KOG0582|consen 255 SGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKL------LKHAFFKKAKSK 302 (516)
T ss_pred ccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHH------hccHHHhhccch
Confidence 123467789999999999999999999999 678999877654
No 17
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.5e-44 Score=395.73 Aligned_cols=256 Identities=33% Similarity=0.532 Sum_probs=232.1
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEecc-CCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQ-EYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~-~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
.-|++++.||.|+.|.|-+|++ +|+.+|||++.+. .........+.+||-||+.+.||||+++|++|+...++|+|+
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 5689999999999999999997 7999999999876 455566778999999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
||++||.|++++.+.+ ++++..++++++||+.|+.|||..+ |+|||+||+|+||+..+.|||+|||+|...... ..
T Consensus 92 Eyv~gGELFdylv~kG-~l~e~eaa~ff~QIi~gv~yCH~~~--icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g-kl 167 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKG-PLPEREAAHFFRQILDGVSYCHAFN--ICHRDLKPENLLLDVKNNIKIADFGMASLEVPG-KL 167 (786)
T ss_pred EecCCchhHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHhhhc--ceeccCCchhhhhhcccCEeeeccceeecccCC-cc
Confidence 9999999999997754 7999999999999999999999998 999999999999999999999999999765443 34
Q ss_pred ccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHH
Q 003978 662 TKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVES 740 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~-s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~ 740 (782)
..+.||+|.|.+||++.|.+| +.++||||.||+||.||||++||+..+....+.++ ..+.+.+|.++++++++||.+
T Consensus 168 LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV--~~G~f~MPs~Is~eaQdLLr~ 245 (786)
T KOG0588|consen 168 LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKV--QRGVFEMPSNISSEAQDLLRR 245 (786)
T ss_pred ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHH--HcCcccCCCcCCHHHHHHHHH
Confidence 567799999999999999998 57899999999999999999999988888887777 456788899999999999999
Q ss_pred hhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 741 CWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 741 cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
||..||..|.|..+| +.|+|+++-.+
T Consensus 246 ml~VDp~~RiT~~eI------~kHP~l~g~~~ 271 (786)
T KOG0588|consen 246 MLDVDPSTRITTEEI------LKHPFLSGYTS 271 (786)
T ss_pred HhccCccccccHHHH------hhCchhhcCCC
Confidence 999999999999999 67899866543
No 18
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.5e-43 Score=352.86 Aligned_cols=262 Identities=23% Similarity=0.318 Sum_probs=226.9
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
.+|...++||+|+||.||+|++ +|+.||||.++.....+.......+||++|+.++|+||+.++++|.+...+.||+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 4688889999999999999997 67889999998887766666778899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
||+ .+|+..++.....+....+..++.++++||+|||++. |+||||||.|+||+.+|.+||+|||+|+.........
T Consensus 82 fm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~--IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~ 158 (318)
T KOG0659|consen 82 FMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKW--ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQ 158 (318)
T ss_pred ecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhh--hhcccCCccceEEcCCCcEEeecccchhccCCCCccc
Confidence 995 5999999998889999999999999999999999999 9999999999999999999999999999887765555
Q ss_pred cCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc------c-----------
Q 003978 663 KTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR------L----------- 724 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~------~----------- 724 (782)
...+-|..|+|||++.|. .|+..+||||+||++.||+-|.+-|.+.+..+.+..+-...+. +
T Consensus 159 ~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~ 238 (318)
T KOG0659|consen 159 THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKI 238 (318)
T ss_pred ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHH
Confidence 555789999999999874 5788999999999999999999999888877655544211110 0
Q ss_pred ---------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcCC
Q 003978 725 ---------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVG 775 (782)
Q Consensus 725 ---------~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~~ 775 (782)
.+....+.++-+|+.+||..||.+|++++|+ |.++||++.+.+.-
T Consensus 239 ~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qa------L~~~yf~~~P~pt~ 292 (318)
T KOG0659|consen 239 QQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQA------LKHPYFKSLPLPTP 292 (318)
T ss_pred hcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHH------hcchhhhcCCCCCC
Confidence 0123356788999999999999999999999 67899998776554
No 19
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.7e-43 Score=384.17 Aligned_cols=258 Identities=24% Similarity=0.419 Sum_probs=223.8
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
..++|+++++||+|+||.||+|+. +|.-+|||++++... ....+.-++.|-.+|...++|+||++|..|++..++||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 457899999999999999999986 677899999987665 44667788899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc--
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE-- 657 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~-- 657 (782)
||||++||++..+|.+.+ .|++..+.+++.+++.|+..||++| +|||||||+|+|||..|+|||+|||++.-...
T Consensus 219 iMEylPGGD~mTLL~~~~-~L~e~~arfYiaE~vlAI~~iH~~g--yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~ 295 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKD-TLTEDWARFYIAETVLAIESIHQLG--YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKH 295 (550)
T ss_pred EEEecCCccHHHHHHhcC-cCchHHHHHHHHHHHHHHHHHHHcC--cccccCChhheeecCCCCEeeccccccchhhhhh
Confidence 999999999999998754 6999999999999999999999999 99999999999999999999999999852110
Q ss_pred ---------------------ccc------c------------------ccCCCCCCcccCcccccCCCCCchhHHHHHH
Q 003978 658 ---------------------TYL------T------------------TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFG 692 (782)
Q Consensus 658 ---------------------~~~------~------------------~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG 692 (782)
... . ....+|||.|||||++.+..|+...|+||||
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG 375 (550)
T KOG0605|consen 296 RIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLG 375 (550)
T ss_pred hhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHH
Confidence 000 0 0123699999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCC--CCCHHHHHHHHHhhhhCCCCCC---CHHHHHHHHHHHHHHHh
Q 003978 693 VILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPK--DVDPRWAAIVESCWHSDPQCRP---SFQELVDKLRDLQRQYF 767 (782)
Q Consensus 693 ~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~--~~~~~l~~LI~~cL~~dP~~RP---s~~ell~~L~~L~~~~~ 767 (782)
|+|||||.|.+||...++.++..+|..-.....+|. .+++++++||.+||. ||++|. +++|| -.|+||
T Consensus 376 ~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EI------K~HPfF 448 (550)
T KOG0605|consen 376 CIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEI------KKHPFF 448 (550)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHH------hcCCcc
Confidence 999999999999999999999988865444455554 478999999999999 999997 47777 468999
Q ss_pred hcc
Q 003978 768 QAS 770 (782)
Q Consensus 768 ~~~ 770 (782)
+.+
T Consensus 449 ~~v 451 (550)
T KOG0605|consen 449 KGV 451 (550)
T ss_pred ccC
Confidence 654
No 20
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.5e-43 Score=367.88 Aligned_cols=264 Identities=22% Similarity=0.370 Sum_probs=227.7
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEcC--CeEEEEEEeccCCC-HHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYG--SDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 576 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~--~~vAiK~~~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 576 (782)
......+|++++.||+|.-|+||+|...+ ..+|||++.+.... .+.+.++..|-+||+.++||.++.+|..|+.++.
T Consensus 72 ~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~ 151 (459)
T KOG0610|consen 72 GSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKY 151 (459)
T ss_pred CccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccce
Confidence 34556789999999999999999999876 56999999887653 5667788889999999999999999999999999
Q ss_pred eeEEEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
.|++||||+||+|..+++++ ...|++..+.+++.+++.||+|||..| ||+|||||+||||-++|+|.|+||.++...
T Consensus 152 ~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG--ivYRDLKPENILvredGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 152 SCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG--IVYRDLKPENILVREDGHIMLSDFDLSLRC 229 (459)
T ss_pred eEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc--eeeccCCcceeEEecCCcEEeeeccccccC
Confidence 99999999999999999764 456999999999999999999999999 999999999999999999999999987421
Q ss_pred cc-----------------------------------c---------------------cccccCCCCCCcccCcccccC
Q 003978 656 HE-----------------------------------T---------------------YLTTKTGKGTPQWMAPEVLRN 679 (782)
Q Consensus 656 ~~-----------------------------------~---------------------~~~~~~~~Gt~~y~aPE~l~~ 679 (782)
.. . ...+..++||-.|+|||++.|
T Consensus 230 ~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G 309 (459)
T KOG0610|consen 230 PVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG 309 (459)
T ss_pred CCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeec
Confidence 00 0 011234579999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCC----HHHH
Q 003978 680 EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPS----FQEL 755 (782)
Q Consensus 680 ~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs----~~el 755 (782)
..++.++|+|+|||+|||||.|..||.+.+..+.+.+|........-.+.++..+++||+++|.+||.+|.. +.||
T Consensus 310 ~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eI 389 (459)
T KOG0610|consen 310 EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEI 389 (459)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHh
Confidence 999999999999999999999999999999999998885433333333467899999999999999999987 8887
Q ss_pred HHHHHHHHHHHhhccc
Q 003978 756 VDKLRDLQRQYFQASR 771 (782)
Q Consensus 756 l~~L~~L~~~~~~~~~ 771 (782)
=+|+||+-.+
T Consensus 390 ------K~HpFF~gVn 399 (459)
T KOG0610|consen 390 ------KRHPFFEGVN 399 (459)
T ss_pred ------hcCccccCCC
Confidence 4689986543
No 21
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-43 Score=381.32 Aligned_cols=258 Identities=28% Similarity=0.488 Sum_probs=230.6
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
....|...++||+|+.|.||.+.. .++.||||.+....... .+-+.+|+.+|+..+|+|||.+++.|-..+.+|+|
T Consensus 271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~--keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV 348 (550)
T KOG0578|consen 271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK--KELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV 348 (550)
T ss_pred hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc--hhhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence 345788899999999999999986 56679999987665433 25678899999999999999999999888999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 660 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 660 (782)
||||+||+|-+.+... .+++.++..|++++++||+|||.+| |+|||||.+|||++.+|.|||+|||++........
T Consensus 349 MEym~ggsLTDvVt~~--~~~E~qIA~Icre~l~aL~fLH~~g--IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~ 424 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTKT--RMTEGQIAAICREILQGLKFLHARG--IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS 424 (550)
T ss_pred EeecCCCchhhhhhcc--cccHHHHHHHHHHHHHHHHHHHhcc--eeeeccccceeEeccCCcEEEeeeeeeeccccccC
Confidence 9999999999999754 4999999999999999999999999 99999999999999999999999999987777666
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-ccCCCCCCCHHHHHHHH
Q 003978 661 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-RLEIPKDVDPRWAAIVE 739 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~-~~~~p~~~~~~l~~LI~ 739 (782)
...+.+|||.|||||++....|+.++||||||++++||+-|.+||-..++...+..|...+. .+..+..++++|++|+.
T Consensus 425 KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~ 504 (550)
T KOG0578|consen 425 KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLD 504 (550)
T ss_pred ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHH
Confidence 77788999999999999999999999999999999999999999998888888877764332 55677889999999999
Q ss_pred HhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 740 SCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 740 ~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
+||..|+.+|+++.+| |+|+||+.+..
T Consensus 505 ~cL~~dv~~RasA~eL------L~HpFl~~a~p 531 (550)
T KOG0578|consen 505 RCLVVDVEQRASAKEL------LEHPFLKMAKP 531 (550)
T ss_pred HHhhcchhcCCCHHHH------hcChhhhhcCC
Confidence 9999999999999999 67899966543
No 22
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-43 Score=382.52 Aligned_cols=266 Identities=26% Similarity=0.348 Sum_probs=228.8
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC--Ccee
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP--QRLC 578 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~~ 578 (782)
..+.|+.+++||+|+||.||++++ .|+-||+|.++.....+.......+||.||++|+|||||++.+..... ..+|
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY 194 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY 194 (560)
T ss_pred chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence 456799999999999999999987 567799999998887777888889999999999999999999998876 6899
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
||||||+. +|..++......|++.++..++.||+.||+|||.+| |+|||||.+|||||.+|.+||+|||+|+++...
T Consensus 195 lVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~g--vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 195 LVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRG--VLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred EEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcC--eeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 99999977 999999888889999999999999999999999999 999999999999999999999999999966543
Q ss_pred c-ccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc--------cCCC-
Q 003978 659 Y-LTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR--------LEIP- 727 (782)
Q Consensus 659 ~-~~~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~--------~~~p- 727 (782)
. ......+-|++|+|||++.|. .|+.++|+||+||+|.||++|++.|.+.+..+.+..|-.+-+. ..+|
T Consensus 272 ~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~ 351 (560)
T KOG0600|consen 272 GSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPH 351 (560)
T ss_pred CCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCc
Confidence 3 234456789999999999985 4899999999999999999999999999887766665322111 1122
Q ss_pred ------------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcCCCC
Q 003978 728 ------------------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVGDS 777 (782)
Q Consensus 728 ------------------~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~~~~ 777 (782)
..++....+|+..||..||.+|.|+.+. |+++||...+.....+
T Consensus 352 ~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~a------L~seyF~t~p~~~~p~ 413 (560)
T KOG0600|consen 352 ATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSA------LQSEYFTTEPLPCDPS 413 (560)
T ss_pred ccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHH------hcCcccccCCCCCCcc
Confidence 3467788999999999999999999998 7789997666555443
No 23
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-44 Score=381.63 Aligned_cols=261 Identities=25% Similarity=0.381 Sum_probs=223.6
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCC-ce
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQ-RL 577 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~-~~ 577 (782)
...++|.++++||.|+||.||+|.. .+..||||.+++....-+.... .||++.|++|+ |||||++.+++.+.+ .+
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~n-LREvksL~kln~hpniikL~Evi~d~~~~L 85 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMN-LREVKSLRKLNPHPNIIKLKEVIRDNDRIL 85 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHH-HHHHHHHHhcCCCCcchhhHHHhhccCceE
Confidence 3457899999999999999999986 5778999999887766554444 46999999998 999999999998887 89
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|+||||| ..+|+++++.+...|++..+..|+.||++||+|+|++| +.|||+||+||||.....|||+|||+|+....
T Consensus 86 ~fVfE~M-d~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~G--fFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 86 YFVFEFM-DCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHG--FFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred eeeHHhh-hhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcC--cccccCChhheEecccceeEeccccccccccc
Confidence 9999999 55999999988889999999999999999999999999 99999999999999888999999999986554
Q ss_pred ccccccCCCCCCcccCccccc-CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc------------
Q 003978 658 TYLTTKTGKGTPQWMAPEVLR-NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL------------ 724 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~-~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~------------ 724 (782)
...- ...+.|.+|+|||++. ...|+.+.|||++||+++|+++-++-|.+.+..+.+.+|....+.+
T Consensus 163 kpPY-TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La 241 (538)
T KOG0661|consen 163 KPPY-TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLA 241 (538)
T ss_pred CCCc-chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHH
Confidence 3222 2446799999999975 5668999999999999999999999999999888777764332211
Q ss_pred -----C-----------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 725 -----E-----------IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 725 -----~-----------~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
. +.+.++.++.+||.+||..||.+|||+.++ |+++||+-....
T Consensus 242 ~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~a------l~~pffq~~~~~ 300 (538)
T KOG0661|consen 242 SAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQA------LQHPFFQVGRAS 300 (538)
T ss_pred HHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHH------hcCccccccccc
Confidence 1 113478899999999999999999999999 778999876654
No 24
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-42 Score=378.20 Aligned_cols=265 Identities=39% Similarity=0.662 Sum_probs=233.0
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
..|++..+++.+++.||+|.||+||+|.|.|. ||||++......++.++.|++|+.+|++-+|.||+-|.|++..+..
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGd-VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~- 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHGD-VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL- 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccccc-eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-
Confidence 57889999999999999999999999999884 9999999988889999999999999999999999999999998877
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
.||..+|+|-+|+.+|.....+|...+.+.|+.||++||.|||.++ |||||||..||++.++++|||+|||++....-
T Consensus 463 AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~--IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~ 540 (678)
T KOG0193|consen 463 AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKN--IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTR 540 (678)
T ss_pred eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhh--hhhhhccccceEEccCCcEEEecccceeeeee
Confidence 9999999999999999888889999999999999999999999999 99999999999999999999999999865432
Q ss_pred ccc--cccCCCCCCcccCcccccC---CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc---ccccCCCCC
Q 003978 658 TYL--TTKTGKGTPQWMAPEVLRN---EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM---NQRLEIPKD 729 (782)
Q Consensus 658 ~~~--~~~~~~Gt~~y~aPE~l~~---~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~---~~~~~~p~~ 729 (782)
-.. ......|...|||||+++. .+|+..+||||||||+|||++|.+||...+..+.+..+... .....+...
T Consensus 541 w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~ 620 (678)
T KOG0193|consen 541 WSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSN 620 (678)
T ss_pred eccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhcc
Confidence 211 1223457889999999863 55788999999999999999999999977766666555433 223334457
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 730 VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 730 ~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
++.++++|+..||..++++||.+.+|+..|..+....
T Consensus 621 ~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~ 657 (678)
T KOG0193|consen 621 CPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSL 657 (678)
T ss_pred CHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcc
Confidence 8889999999999999999999999999999988753
No 25
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.9e-43 Score=345.73 Aligned_cols=256 Identities=28% Similarity=0.471 Sum_probs=228.1
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEcCC--eEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGS--DVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~~~--~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
...++|++++.||+|-||.||+++.+.. -||+|++.+... .....+.+.+|++|...|+||||+++|++|.+...+|
T Consensus 19 ~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riy 98 (281)
T KOG0580|consen 19 WTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIY 98 (281)
T ss_pred cchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeE
Confidence 3457899999999999999999998554 489999877654 3345578999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 579 IVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|++||...|+|+..|... ..++++...+.++.|++.||.|+|.++ ||||||||+|+|++..+.+||+|||.+...+
T Consensus 99 LilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~--VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p- 175 (281)
T KOG0580|consen 99 LILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAP- 175 (281)
T ss_pred EEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC--cccCCCCHHHhccCCCCCeeccCCCceeecC-
Confidence 999999999999999743 346999999999999999999999988 9999999999999999999999999997655
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHH
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 737 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~L 737 (782)
.....+.+||..|++||...+..++..+|+|++|++.||++.|.+||......+.+..+.. -...+|..++.++++|
T Consensus 176 -~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k--~~~~~p~~is~~a~dl 252 (281)
T KOG0580|consen 176 -SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRK--VDLKFPSTISGGAADL 252 (281)
T ss_pred -CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHH--ccccCCcccChhHHHH
Confidence 3455678999999999999999999999999999999999999999999888888877743 4566779999999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 738 VESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 738 I~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
|.+||.++|.+|....++ +.|+|.++
T Consensus 253 I~~ll~~~p~~r~~l~~v------~~hpwI~a 278 (281)
T KOG0580|consen 253 ISRLLVKNPIERLALTEV------MDHPWIVA 278 (281)
T ss_pred HHHHhccCccccccHHHH------hhhHHHHh
Confidence 999999999999999999 56777654
No 26
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=9.9e-42 Score=373.90 Aligned_cols=262 Identities=30% Similarity=0.554 Sum_probs=215.8
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEc-------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeee
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVWY-------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAV 571 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~~-------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~ 571 (782)
|.+..++|++.++||+|+||.||+|.+. +..||||+++... .......+.+|+.+|..+ +|||||++++++
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 80 (338)
T cd05102 2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA-TASEHKALMSELKILIHIGNHLNVVNLLGAC 80 (338)
T ss_pred cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc-chHHHHHHHHHHHHHHHhccCcceeeEEeEe
Confidence 4556689999999999999999999752 3469999987543 334456788999999999 899999999988
Q ss_pred ecC-CceeEEEeecCCCCHHHHHhhcC-----------------------------------------------------
Q 003978 572 TSP-QRLCIVTEFLPRGSLFRLLQRNT----------------------------------------------------- 597 (782)
Q Consensus 572 ~~~-~~~~lv~E~~~ggsL~~~l~~~~----------------------------------------------------- 597 (782)
... ..++++||||++|+|.+++....
T Consensus 81 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T cd05102 81 TKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP 160 (338)
T ss_pred cCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence 764 45899999999999999996532
Q ss_pred --------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc--cccccCCCC
Q 003978 598 --------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET--YLTTKTGKG 667 (782)
Q Consensus 598 --------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~--~~~~~~~~G 667 (782)
.++++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ........+
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~ 238 (338)
T cd05102 161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASRK--CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARL 238 (338)
T ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHHHCC--EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCC
Confidence 23677888999999999999999998 999999999999999999999999999754322 122223456
Q ss_pred CCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCC
Q 003978 668 TPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDP 746 (782)
Q Consensus 668 t~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP 746 (782)
++.|+|||++.+..++.++|||||||+||||++ |..||.....................+..+++.+.+||.+||..||
T Consensus 239 ~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 318 (338)
T cd05102 239 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDP 318 (338)
T ss_pred CccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCCh
Confidence 788999999999999999999999999999997 9999987654433333322333455677889999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHH
Q 003978 747 QCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 747 ~~RPs~~ell~~L~~L~~ 764 (782)
++|||+.++++.|+++.+
T Consensus 319 ~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 319 KERPTFSALVEILGDLLQ 336 (338)
T ss_pred hhCcCHHHHHHHHHHHHh
Confidence 999999999999998765
No 27
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-43 Score=376.35 Aligned_cols=255 Identities=32% Similarity=0.531 Sum_probs=224.3
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
..|+..+.||+|.||.||+|.+ .++.||||++..+... +.+..+.+|+.+|..++++||.++|+.|..+..++++||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~-deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe 91 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAE-DEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME 91 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcc-hhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence 3567778999999999999987 5677999999776543 446778899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
||.||++.+.++... .+.+..+..++++++.||.|||.++ .+|||||+.|||+..+|.|||+|||.+..........
T Consensus 92 y~~gGsv~~lL~~~~-~~~E~~i~~ilre~l~~l~ylH~~~--kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr 168 (467)
T KOG0201|consen 92 YCGGGSVLDLLKSGN-ILDEFEIAVILREVLKGLDYLHSEK--KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR 168 (467)
T ss_pred HhcCcchhhhhccCC-CCccceeeeehHHHHHHhhhhhhcc--eecccccccceeEeccCcEEEEecceeeeeechhhcc
Confidence 999999999998643 4588888999999999999999998 9999999999999999999999999998877766666
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhh
Q 003978 663 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCW 742 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL 742 (782)
.+++|||.|||||++.+..|+.|+||||||++.+||.+|.+||....++.++..|. ...++.+...+++.+++||..||
T Consensus 169 ~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIp-k~~PP~L~~~~S~~~kEFV~~CL 247 (467)
T KOG0201|consen 169 KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIP-KSAPPRLDGDFSPPFKEFVEACL 247 (467)
T ss_pred ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEecc-CCCCCccccccCHHHHHHHHHHh
Confidence 88999999999999999999999999999999999999999999998876655553 23344555678999999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 743 HSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 743 ~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
.+||+.||++.+| |+|+|.|.+
T Consensus 248 ~k~P~~RpsA~~L------LKh~FIk~a 269 (467)
T KOG0201|consen 248 DKNPEFRPSAKEL------LKHKFIKRA 269 (467)
T ss_pred hcCcccCcCHHHH------hhhHHHHhc
Confidence 9999999999999 556666653
No 28
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-43 Score=380.82 Aligned_cols=260 Identities=35% Similarity=0.644 Sum_probs=231.6
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
..|++.++.+.-++-||.|+.|.||+|+..++.||||.++..+ ..+|+-|++|+||||+.|.|+|...-.+
T Consensus 117 e~WeiPFe~IsELeWlGSGaQGAVF~Grl~netVAVKKV~elk---------ETdIKHLRkLkH~NII~FkGVCtqsPcy 187 (904)
T KOG4721|consen 117 ELWEIPFEEISELEWLGSGAQGAVFLGRLHNETVAVKKVRELK---------ETDIKHLRKLKHPNIITFKGVCTQSPCY 187 (904)
T ss_pred hhccCCHHHhhhhhhhccCcccceeeeeccCceehhHHHhhhh---------hhhHHHHHhccCcceeeEeeeecCCcee
Confidence 4678888888888999999999999999999999999874322 3478999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|||||||..|-|+..|+.. .++.......+..+|+.||.|||.+. |||||||.-||||+.+..|||+|||.++...+
T Consensus 188 CIiMEfCa~GqL~~VLka~-~~itp~llv~Wsk~IA~GM~YLH~hK--IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~ 264 (904)
T KOG4721|consen 188 CIIMEFCAQGQLYEVLKAG-RPITPSLLVDWSKGIAGGMNYLHLHK--IIHRDLKSPNILISYDDVVKISDFGTSKELSD 264 (904)
T ss_pred EEeeeccccccHHHHHhcc-CccCHHHHHHHHHHhhhhhHHHHHhh--HhhhccCCCceEeeccceEEeccccchHhhhh
Confidence 9999999999999999864 57888888999999999999999998 99999999999999999999999999986655
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHH
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 737 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~L 737 (782)
. .+.-.++||..|||||++.+.+.+.|+|||||||||||||||..||...+....+.-+......+.+|..+|.-|+-|
T Consensus 265 ~-STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL 343 (904)
T KOG4721|consen 265 K-STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLL 343 (904)
T ss_pred h-hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHHHH
Confidence 4 344467899999999999999999999999999999999999999999888777666666666788999999999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHH--------HHHHhhcc
Q 003978 738 VESCWHSDPQCRPSFQELVDKLRDL--------QRQYFQAS 770 (782)
Q Consensus 738 I~~cL~~dP~~RPs~~ell~~L~~L--------~~~~~~~~ 770 (782)
|++||+.+|.+||++++++.+|+=. +..||+++
T Consensus 344 ~Kqcw~sKpRNRPSFrqil~HldIa~pell~~tee~yf~sq 384 (904)
T KOG4721|consen 344 LKQCWNSKPRNRPSFRQILLHLDIASPELLSTTEETYFKSQ 384 (904)
T ss_pred HHHHHhcCCCCCccHHHHHHHHhhcCHHHhcccHHHHHHHH
Confidence 9999999999999999999998744 45666543
No 29
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=8.9e-42 Score=366.68 Aligned_cols=251 Identities=24% Similarity=0.417 Sum_probs=219.4
Q ss_pred cceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
++|++.++||+|+||.||+|... ++.||||++..... .......+.+|+.+++.++||||+++++++.+...+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 37899999999999999999985 77899999976443 2234567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
||+.+++|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~--- 154 (291)
T cd05612 81 EYVPGGELFSYLRNS-GRFSNSTGLFYASEIVCALEYLHSKE--IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR--- 154 (291)
T ss_pred eCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECCCCCEEEEecCcchhccCC---
Confidence 999999999999764 46889999999999999999999999 999999999999999999999999998765432
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHh
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 741 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~c 741 (782)
.....||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....++..+++.+++||.+|
T Consensus 155 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~li~~~ 232 (291)
T cd05612 155 TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKIL--AGKLEFPRHLDLYAKDLIKKL 232 (291)
T ss_pred cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--hCCcCCCccCCHHHHHHHHHH
Confidence 224578999999999999999999999999999999999999999887776666553 334567788899999999999
Q ss_pred hhhCCCCCCC-----HHHHHHHHHHHHHHHhhc
Q 003978 742 WHSDPQCRPS-----FQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 742 L~~dP~~RPs-----~~ell~~L~~L~~~~~~~ 769 (782)
|..||.+||+ +.++ +.|+||+.
T Consensus 233 l~~dp~~R~~~~~~~~~~~------l~h~~~~~ 259 (291)
T cd05612 233 LVVDRTRRLGNMKNGADDV------KNHRWFKS 259 (291)
T ss_pred cCCCHHHccCCccCCHHHH------hcCccccC
Confidence 9999999995 8888 57888864
No 30
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=8.9e-42 Score=372.41 Aligned_cols=248 Identities=26% Similarity=0.492 Sum_probs=214.7
Q ss_pred eeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCCC
Q 003978 511 EQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRG 587 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg 587 (782)
+.||+|+||.||++.. .++.||||++++... .......+.+|+.+++.++||||+++++++...+.+|+||||+.++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999987 567899999986543 2344566788999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCCC
Q 003978 588 SLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKG 667 (782)
Q Consensus 588 sL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~G 667 (782)
+|.+++... ..+++..+..++.||+.||+|||++| |+||||||+||||+.++.+||+|||+++............+|
T Consensus 81 ~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~--ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~g 157 (323)
T cd05571 81 ELFFHLSRE-RVFSEDRARFYGAEIVSALGYLHSCD--VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG 157 (323)
T ss_pred cHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceec
Confidence 999999764 46899999999999999999999999 999999999999999999999999998754333333345679
Q ss_pred CCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCC
Q 003978 668 TPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQ 747 (782)
Q Consensus 668 t~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~ 747 (782)
|+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....+|..+++++.+||.+||..||+
T Consensus 158 t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~li~~~L~~dP~ 235 (323)
T cd05571 158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL--MEEIRFPRTLSPEAKSLLAGLLKKDPK 235 (323)
T ss_pred CccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHHHHHHHHHccCCHH
Confidence 999999999999999999999999999999999999998877666555542 345567888999999999999999999
Q ss_pred CCC-----CHHHHHHHHHHHHHHHhhc
Q 003978 748 CRP-----SFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 748 ~RP-----s~~ell~~L~~L~~~~~~~ 769 (782)
+|| ++.++ +.|+||+.
T Consensus 236 ~R~~~~~~~~~~l------l~h~~f~~ 256 (323)
T cd05571 236 QRLGGGPEDAKEI------MEHRFFAS 256 (323)
T ss_pred HcCCCCCCCHHHH------HcCCCcCC
Confidence 999 79999 56788754
No 31
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-42 Score=365.40 Aligned_cols=250 Identities=26% Similarity=0.439 Sum_probs=209.3
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCH------------HHHHHHHHHHHHHHhCCCCceeE
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSD------------EVIHSFRQEVSLMKRLRHPNVLL 566 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~------------~~~~~~~~Ei~il~~l~HpnIv~ 566 (782)
....++|++++.||+|.||.|.+++. .++.||||++.+..... .-++..++||.+|+++.|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 34568999999999999999999987 56779999997654321 12357889999999999999999
Q ss_pred EeeeeecC--CceeEEEeecCCCCHHHHHhhcCCc-chHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc
Q 003978 567 FMGAVTSP--QRLCIVTEFLPRGSLFRLLQRNTTK-LDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT 643 (782)
Q Consensus 567 l~~~~~~~--~~~~lv~E~~~ggsL~~~l~~~~~~-l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~ 643 (782)
|+++..++ +.+|||+|||..|.+...-. ..+ +++.++++++.+++.||+|||.+| ||||||||+|+||+.+|+
T Consensus 173 LiEvLDDP~s~~~YlVley~s~G~v~w~p~--d~~els~~~Ar~ylrDvv~GLEYLH~Qg--iiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVLEYCSKGEVKWCPP--DKPELSEQQARKYLRDVVLGLEYLHYQG--IIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred EEEeecCcccCceEEEEEeccCCccccCCC--CcccccHHHHHHHHHHHHHHHHHHHhcC--eeccccchhheEEcCCCc
Confidence 99999876 46999999998887643322 233 899999999999999999999999 999999999999999999
Q ss_pred EEEEecCCCcccccc-----cccccCCCCCCcccCcccccCCC---C-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 003978 644 VKVGDFGLSRLKHET-----YLTTKTGKGTPQWMAPEVLRNEP---S-DEKSDVYSFGVILWELATEKIPWDNLNSMQVI 714 (782)
Q Consensus 644 vkL~DFGla~~~~~~-----~~~~~~~~Gt~~y~aPE~l~~~~---~-s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~ 714 (782)
|||+|||.+...... .......+|||.|+|||++.+.. + +.+.|||||||+||.|+.|.+||-.......+
T Consensus 249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~ 328 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELF 328 (576)
T ss_pred EEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHH
Confidence 999999998754221 11222358999999999998732 2 57899999999999999999999999888888
Q ss_pred HHhhccccccCCCC--CCCHHHHHHHHHhhhhCCCCCCCHHHHH
Q 003978 715 GAVGFMNQRLEIPK--DVDPRWAAIVESCWHSDPQCRPSFQELV 756 (782)
Q Consensus 715 ~~i~~~~~~~~~p~--~~~~~l~~LI~~cL~~dP~~RPs~~ell 756 (782)
.+|. .....+|. .+...+++||++||.+||+.|.++.+|.
T Consensus 329 ~KIv--n~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik 370 (576)
T KOG0585|consen 329 DKIV--NDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIK 370 (576)
T ss_pred HHHh--cCcccCCCcccccHHHHHHHHHHhhcChhheeehhhhe
Confidence 8884 44555554 4799999999999999999999999994
No 32
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-42 Score=367.40 Aligned_cols=258 Identities=26% Similarity=0.434 Sum_probs=233.9
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
...-|.+.+.||+|-|.+|.++++ .|..||||++.+.+.+.-....+.+|++.|+.++|||||++|++......+|||
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi 95 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI 95 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence 345688889999999999999986 899999999999888776677788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE-cCCCcEEEEecCCCccccccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV-DKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl-~~~~~vkL~DFGla~~~~~~~ 659 (782)
+|+-++|+|++||.++...+.+..+.+++.||+.|+.|+|+.. +|||||||+||++ .+-|.|||+|||++-.+. +.
T Consensus 96 LELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLH--VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~-PG 172 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLH--VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ-PG 172 (864)
T ss_pred EEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhh--hhcccCCcceeEEeeecCceEeeeccccccCC-Cc
Confidence 9999999999999998888999999999999999999999988 9999999999887 567999999999996543 34
Q ss_pred ccccCCCCCCcccCcccccCCCCC-chhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHH
Q 003978 660 LTTKTGKGTPQWMAPEVLRNEPSD-EKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 738 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~~~~~s-~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI 738 (782)
....+.+|+..|-|||++.|..|+ +++||||||++||.|++|.+||+..+..+.+..| +.-.+.+|..++.++++||
T Consensus 173 ~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmI--mDCKYtvPshvS~eCrdLI 250 (864)
T KOG4717|consen 173 KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMI--MDCKYTVPSHVSKECRDLI 250 (864)
T ss_pred chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhh--hcccccCchhhhHHHHHHH
Confidence 556688999999999999999997 4799999999999999999999999998888777 4556788999999999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 739 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 739 ~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
..||.+||++|.++++| ..+.|.|.+-
T Consensus 251 ~sMLvRdPkkRAslEeI------~s~~Wlq~~D 277 (864)
T KOG4717|consen 251 QSMLVRDPKKRASLEEI------VSTSWLQAGD 277 (864)
T ss_pred HHHHhcCchhhccHHHH------hccccccCCC
Confidence 99999999999999999 5678887653
No 33
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.5e-41 Score=371.70 Aligned_cols=253 Identities=28% Similarity=0.451 Sum_probs=220.6
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
..++|++.+.||+|+||.||+|.+ .++.||||++..... .......+.+|+.+++.++||||+++++++..++.+|+
T Consensus 16 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 95 (329)
T PTZ00263 16 KLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYF 95 (329)
T ss_pred CchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEE
Confidence 347899999999999999999988 467899999976543 22445678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
|||||.+++|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+||||+.++.+||+|||++.......
T Consensus 96 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 172 (329)
T PTZ00263 96 LLEFVVGGELFTHLRKA-GRFPNDVAKFYHAELVLAFEYLHSKD--IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT 172 (329)
T ss_pred EEcCCCCChHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHEEECCCCCEEEeeccCceEcCCCc
Confidence 99999999999999764 46888999999999999999999999 9999999999999999999999999997654322
Q ss_pred ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHH
Q 003978 660 LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVE 739 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~ 739 (782)
....||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....+|..++..+++||.
T Consensus 173 ---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~--~~~~~~p~~~~~~~~~li~ 247 (329)
T PTZ00263 173 ---FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKIL--AGRLKFPNWFDGRARDLVK 247 (329)
T ss_pred ---ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHh--cCCcCCCCCCCHHHHHHHH
Confidence 24578999999999999999999999999999999999999998887776666553 3456677889999999999
Q ss_pred HhhhhCCCCCCC-----HHHHHHHHHHHHHHHhhc
Q 003978 740 SCWHSDPQCRPS-----FQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 740 ~cL~~dP~~RPs-----~~ell~~L~~L~~~~~~~ 769 (782)
+||..||.+||+ +.++ +.|+||+.
T Consensus 248 ~~L~~dP~~R~~~~~~~~~~l------l~hp~f~~ 276 (329)
T PTZ00263 248 GLLQTDHTKRLGTLKGGVADV------KNHPYFHG 276 (329)
T ss_pred HHhhcCHHHcCCCCCCCHHHH------hcCCccCC
Confidence 999999999996 7888 56787754
No 34
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.1e-42 Score=373.27 Aligned_cols=252 Identities=28% Similarity=0.463 Sum_probs=230.4
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc-eeEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR-LCIV 580 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~-~~lv 580 (782)
.++|.++++||+|+||.+++++++ +..|++|.+...............|+.+++++.|||||.+++.|+.++. ++||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 468999999999999999999875 4569999998887777666788899999999999999999999999888 9999
Q ss_pred EeecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 581 TEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
|+||+||+|.+.|.+.. ..++++.+..++.|++.|+.|||+++ |+|||||+.||++++++.|||+|||+|+......
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~--iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR--VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED 160 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh--hhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence 99999999999997654 67999999999999999999999888 9999999999999999999999999999888776
Q ss_pred ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHH
Q 003978 660 LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVE 739 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~ 739 (782)
....+.+|||.||+||++.+.+|+.|+|||||||++|||++-+++|...+.......+.... ..++|..++.+++.||+
T Consensus 161 ~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~-~~Plp~~ys~el~~lv~ 239 (426)
T KOG0589|consen 161 SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL-YSPLPSMYSSELRSLVK 239 (426)
T ss_pred hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc-CCCCCccccHHHHHHHH
Confidence 56667899999999999999999999999999999999999999999999988887774333 46788899999999999
Q ss_pred HhhhhCCCCCCCHHHHHHH
Q 003978 740 SCWHSDPQCRPSFQELVDK 758 (782)
Q Consensus 740 ~cL~~dP~~RPs~~ell~~ 758 (782)
.||..+|..||++.+||..
T Consensus 240 ~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 240 SMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHhhcCCccCCCHHHHhhC
Confidence 9999999999999999876
No 35
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7e-42 Score=357.28 Aligned_cols=251 Identities=24% Similarity=0.453 Sum_probs=222.8
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCH-HHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
..+..+|++.+.||+|+||+|.++.. .|+.||||.+++....+ .-+-.+++||+||..|+||||+++|.+|+..+.+
T Consensus 49 hnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKI 128 (668)
T KOG0611|consen 49 HNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKI 128 (668)
T ss_pred cchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceE
Confidence 34556899999999999999999975 68899999999887744 4566789999999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
+|||||..+|.|++|+...+ .+++..+..+++||+.|+.|+|.++ ++|||||.+|||++.++++||+|||++-++.+
T Consensus 129 vivMEYaS~GeLYDYiSer~-~LsErEaRhfFRQIvSAVhYCHknr--VvHRDLKLENILLD~N~NiKIADFGLSNly~~ 205 (668)
T KOG0611|consen 129 VIVMEYASGGELYDYISERG-SLSEREARHFFRQIVSAVHYCHKNR--VVHRDLKLENILLDQNNNIKIADFGLSNLYAD 205 (668)
T ss_pred EEEEEecCCccHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHhhcc--ceecccchhheeecCCCCeeeeccchhhhhcc
Confidence 99999999999999998754 6999999999999999999999999 99999999999999999999999999987765
Q ss_pred ccccccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHH
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 736 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~~~-s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~ 736 (782)
.. ...++||+|-|.+||++.|.+| +..+|.||||++||-|+.|..||++.+......+|....+ ..+.-|.....
T Consensus 206 ~k-fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaY---rEP~~PSdA~g 281 (668)
T KOG0611|consen 206 KK-FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAY---REPETPSDASG 281 (668)
T ss_pred cc-HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccc---cCCCCCchHHH
Confidence 53 3457899999999999999998 5789999999999999999999999998888777743322 23345677899
Q ss_pred HHHHhhhhCCCCCCCHHHHHHH
Q 003978 737 IVESCWHSDPQCRPSFQELVDK 758 (782)
Q Consensus 737 LI~~cL~~dP~~RPs~~ell~~ 758 (782)
||++||..||++|.|+.++..+
T Consensus 282 LIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 282 LIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred HHHHHHhcCcccchhHHHHhhh
Confidence 9999999999999999999544
No 36
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=4.2e-40 Score=363.70 Aligned_cols=258 Identities=27% Similarity=0.412 Sum_probs=211.3
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
....+|+++++||+|+||.||++.+. ++.||||++.... .......+.+|+++++.++|+||+++++++...+.+|+
T Consensus 71 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 149 (353)
T PLN00034 71 KSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQV 149 (353)
T ss_pred CCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEE
Confidence 34567889999999999999999874 6789999986543 34456778899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
|||||.+++|.... ...+..+..++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++......
T Consensus 150 v~e~~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~ 222 (353)
T PLN00034 150 LLEFMDGGSLEGTH-----IADEQFLADVARQILSGIAYLHRRH--IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM 222 (353)
T ss_pred EEecCCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcCCCCEEEcccccceeccccc
Confidence 99999999986532 3456778889999999999999998 9999999999999999999999999998655443
Q ss_pred ccccCCCCCCcccCcccccC-----CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH--hhccccccCCCCCCCH
Q 003978 660 LTTKTGKGTPQWMAPEVLRN-----EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGA--VGFMNQRLEIPKDVDP 732 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~~-----~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~--i~~~~~~~~~p~~~~~ 732 (782)
.......||..|+|||++.. ...+.++|||||||++|+|++|+.||........... ..........+..++.
T Consensus 223 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (353)
T PLN00034 223 DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASR 302 (353)
T ss_pred ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCH
Confidence 33345679999999998743 3345689999999999999999999974332221111 1112334556678899
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 733 RWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 733 ~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
++++||.+||..||++||++.++ |+|+||......
T Consensus 303 ~l~~li~~~l~~~P~~Rpt~~el------l~hp~~~~~~~~ 337 (353)
T PLN00034 303 EFRHFISCCLQREPAKRWSAMQL------LQHPFILRAQPG 337 (353)
T ss_pred HHHHHHHHHccCChhhCcCHHHH------hcCcccccCCcc
Confidence 99999999999999999999999 678999776544
No 37
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.3e-40 Score=354.63 Aligned_cols=248 Identities=24% Similarity=0.436 Sum_probs=215.4
Q ss_pred eeeccCCcEEEEEEEEcCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeec----CCceeEEEeecC
Q 003978 511 EQIGQGSCGTVYHAVWYGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS----PQRLCIVTEFLP 585 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~----~~~~~lv~E~~~ 585 (782)
..||+|++|.||+|.+.++.||||.++.... .....+.+.+|+.+|+.++|||||++++++.+ ...+++|||||+
T Consensus 26 ~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~ 105 (283)
T PHA02988 26 VLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCT 105 (283)
T ss_pred eEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCC
Confidence 5689999999999999999999999976544 33445788899999999999999999999866 346899999999
Q ss_pred CCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcC-CCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccC
Q 003978 586 RGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC-NPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKT 664 (782)
Q Consensus 586 ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~-~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 664 (782)
+|+|.+++... ..+++...+.++.|++.||.|||.. + ++||||||+|||++.++.+||+|||+++...... ..
T Consensus 106 ~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~--~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~---~~ 179 (283)
T PHA02988 106 RGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKYTN--KPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP---FK 179 (283)
T ss_pred CCcHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHHhcCC--CCCCcCChhhEEECCCCcEEEcccchHhhhcccc---cc
Confidence 99999999764 4688999999999999999999984 6 8899999999999999999999999987544322 24
Q ss_pred CCCCCcccCcccccC--CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhh
Q 003978 665 GKGTPQWMAPEVLRN--EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCW 742 (782)
Q Consensus 665 ~~Gt~~y~aPE~l~~--~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL 742 (782)
..|++.|+|||++.+ ..++.++|||||||++|||++|..||...+..+....+........++..+++.+++||.+||
T Consensus 180 ~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl 259 (283)
T PHA02988 180 NVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACT 259 (283)
T ss_pred ccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHh
Confidence 468999999999976 678999999999999999999999999888777666664445566677789999999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHH
Q 003978 743 HSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 743 ~~dP~~RPs~~ell~~L~~L~~ 764 (782)
+.||++|||+.++++.|+.++.
T Consensus 260 ~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 260 SHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred cCCcccCcCHHHHHHHHHHHHh
Confidence 9999999999999999887753
No 38
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=6.7e-41 Score=368.38 Aligned_cols=257 Identities=25% Similarity=0.415 Sum_probs=221.7
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEcC---CeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYG---SDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~---~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
.....++|++.+.||+|+||.||+|.+.+ ..||+|++..... .......+.+|+.+++.++|||||++++++...+
T Consensus 25 ~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~ 104 (340)
T PTZ00426 25 NKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES 104 (340)
T ss_pred CCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC
Confidence 34556789999999999999999998643 4699999876543 2344567889999999999999999999999999
Q ss_pred ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
.+|+|||||.+|+|.+++.... .+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...
T Consensus 105 ~~~lv~Ey~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~~~~ikL~DFG~a~~~ 181 (340)
T PTZ00426 105 YLYLVLEFVIGGEFFTFLRRNK-RFPNDVGCFYAAQIVLIFEYLQSLN--IVYRDLKPENLLLDKDGFIKMTDFGFAKVV 181 (340)
T ss_pred EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC--eEccCCCHHHEEECCCCCEEEecCCCCeec
Confidence 9999999999999999997654 6899999999999999999999999 999999999999999999999999999765
Q ss_pred ccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHH
Q 003978 656 HETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWA 735 (782)
Q Consensus 656 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~ 735 (782)
... .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....+|..+++.+.
T Consensus 182 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~--~~~~~~p~~~~~~~~ 256 (340)
T PTZ00426 182 DTR---TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKIL--EGIIYFPKFLDNNCK 256 (340)
T ss_pred CCC---cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHh--cCCCCCCCCCCHHHH
Confidence 432 234579999999999999889999999999999999999999999887766655553 334567788999999
Q ss_pred HHHHHhhhhCCCCCC-----CHHHHHHHHHHHHHHHhhcc
Q 003978 736 AIVESCWHSDPQCRP-----SFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 736 ~LI~~cL~~dP~~RP-----s~~ell~~L~~L~~~~~~~~ 770 (782)
+||++||..||++|+ +++++ +.|+||+..
T Consensus 257 ~li~~~l~~dp~~R~~~~~~~~~~~------~~hp~f~~~ 290 (340)
T PTZ00426 257 HLMKKLLSHDLTKRYGNLKKGAQNV------KEHPWFGNI 290 (340)
T ss_pred HHHHHHcccCHHHcCCCCCCCHHHH------HcCCCcCCC
Confidence 999999999999995 89998 567887643
No 39
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-42 Score=349.03 Aligned_cols=259 Identities=27% Similarity=0.477 Sum_probs=231.9
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
.+..++|..+++||+|+||+|.+|+. .++.||||+++++.. ..+.+.--..|-++|+..+||.+..+-..|+..+++
T Consensus 164 kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drl 243 (516)
T KOG0690|consen 164 KVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRL 243 (516)
T ss_pred eeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceE
Confidence 45678999999999999999999986 577799999988765 344455566799999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|+||||..||.|+-+|.+. ..+++.+..++...|+.||.|||+++ ||+||||.+|+|++++|+|||+|||+++....
T Consensus 244 CFVMeyanGGeLf~HLsre-r~FsE~RtRFYGaEIvsAL~YLHs~~--ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~ 320 (516)
T KOG0690|consen 244 CFVMEYANGGELFFHLSRE-RVFSEDRTRFYGAEIVSALGYLHSRN--IVYRDLKLENLLLDKDGHIKITDFGLCKEEIK 320 (516)
T ss_pred EEEEEEccCceEeeehhhh-hcccchhhhhhhHHHHHHhhhhhhCC--eeeeechhhhheeccCCceEeeecccchhccc
Confidence 9999999999999999874 46999999999999999999999998 99999999999999999999999999987777
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHH
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 737 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~L 737 (782)
...+..+++|||.|+|||++....|+.++|+|.+|++||||+||++||...+.......| ......+|..++++++.|
T Consensus 321 ~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLI--l~ed~kFPr~ls~eAktL 398 (516)
T KOG0690|consen 321 YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELI--LMEDLKFPRTLSPEAKTL 398 (516)
T ss_pred ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHH--HhhhccCCccCCHHHHHH
Confidence 778888999999999999999999999999999999999999999999998888877776 456778999999999999
Q ss_pred HHHhhhhCCCCCC-----CHHHHHHHHHHHHHHHhhcc
Q 003978 738 VESCWHSDPQCRP-----SFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 738 I~~cL~~dP~~RP-----s~~ell~~L~~L~~~~~~~~ 770 (782)
+..+|.+||.+|. ++.|+ .+|.||..+
T Consensus 399 LsGLL~kdP~kRLGgGpdDakEi------~~h~FF~~v 430 (516)
T KOG0690|consen 399 LSGLLKKDPKKRLGGGPDDAKEI------MRHRFFASV 430 (516)
T ss_pred HHHHhhcChHhhcCCCchhHHHH------HhhhhhccC
Confidence 9999999999995 35555 567887443
No 40
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2e-40 Score=354.92 Aligned_cols=257 Identities=21% Similarity=0.297 Sum_probs=214.0
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCC-HHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
.|++.+.||+|+||.||++.. .++.||+|++...... ......+.+|+.+++.++|+||+++++++..++.+++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 378899999999999999986 5778999998765432 2233467789999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 583 FLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 583 ~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
||++++|..++... ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++....... .
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-~ 157 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER--IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE-T 157 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC-e
Confidence 99999999888543 346899999999999999999999998 9999999999999999999999999997643322 2
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhh--ccccccCCCCCCCHHHHHHHH
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVG--FMNQRLEIPKDVDPRWAAIVE 739 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~--~~~~~~~~p~~~~~~l~~LI~ 739 (782)
.....||+.|+|||++.+..++.++|||||||++|+|++|+.||...........+. .......++..++.++.+||.
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~ 237 (285)
T cd05631 158 VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICR 237 (285)
T ss_pred ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHH
Confidence 234578999999999999999999999999999999999999998765432222211 122344566779999999999
Q ss_pred HhhhhCCCCCCC-----HHHHHHHHHHHHHHHhhccc
Q 003978 740 SCWHSDPQCRPS-----FQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 740 ~cL~~dP~~RPs-----~~ell~~L~~L~~~~~~~~~ 771 (782)
+||..||.+||+ +.++ ++|+||+..+
T Consensus 238 ~~l~~~P~~R~~~~~~~~~~~------~~h~~~~~~~ 268 (285)
T cd05631 238 MLLTKNPKERLGCRGNGAAGV------KQHPIFKNIN 268 (285)
T ss_pred HHhhcCHHHhcCCCCCCHHHH------hcCHhhcCCC
Confidence 999999999997 7888 5678886643
No 41
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=9.9e-41 Score=365.50 Aligned_cols=254 Identities=24% Similarity=0.361 Sum_probs=217.2
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCC-HHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
++|++++.||+|+||.||+|.+ .++.||||+++..... ......+..|+.++..++||||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 4799999999999999999998 4678999999865432 234567888999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
|||++++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..... .
T Consensus 81 e~~~g~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~---~ 154 (333)
T cd05600 81 EYVPGGDFRTLLNNL-GVLSEDHARFYMAEMFEAVDALHELG--YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT---Y 154 (333)
T ss_pred eCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECCCCCEEEEeCcCCccccc---c
Confidence 999999999999754 46889999999999999999999999 99999999999999999999999999975543 2
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC------CCCCHHHH
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP------KDVDPRWA 735 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p------~~~~~~l~ 735 (782)
.....||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+.........| ..++.++.
T Consensus 155 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~ 234 (333)
T cd05600 155 ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAW 234 (333)
T ss_pred cCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHH
Confidence 235579999999999999999999999999999999999999999887766655553322222222 24689999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
+||.+||..+|.+||++.++ +.|+||+..
T Consensus 235 ~li~~~l~~~~~rr~s~~~l------l~h~~~~~~ 263 (333)
T cd05600 235 DLITKLINDPSRRFGSLEDI------KNHPFFKEV 263 (333)
T ss_pred HHHHHHhhChhhhcCCHHHH------HhCcccCCC
Confidence 99999999999999999999 567777653
No 42
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=9.2e-41 Score=364.52 Aligned_cols=248 Identities=25% Similarity=0.470 Sum_probs=212.8
Q ss_pred eeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCCC
Q 003978 511 EQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRG 587 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg 587 (782)
+.||+|+||.||++.. .+..||+|+++.... .......+.+|+++++.++||||+++++++..++.+|+||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4699999999999987 467899999976533 2344567778999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCCC
Q 003978 588 SLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKG 667 (782)
Q Consensus 588 sL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~G 667 (782)
+|..++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++..............|
T Consensus 81 ~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 157 (323)
T cd05595 81 ELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG 157 (323)
T ss_pred cHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccC
Confidence 999998764 36899999999999999999999998 999999999999999999999999998753332223334579
Q ss_pred CCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCC
Q 003978 668 TPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQ 747 (782)
Q Consensus 668 t~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~ 747 (782)
|+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....+|..+++++.+||.+||..||.
T Consensus 158 t~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~li~~~L~~dP~ 235 (323)
T cd05595 158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRTLSPEAKSLLAGLLKKDPK 235 (323)
T ss_pred CcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHh--cCCCCCCCCCCHHHHHHHHHHccCCHH
Confidence 999999999999999999999999999999999999998877766555542 334567788999999999999999999
Q ss_pred CCC-----CHHHHHHHHHHHHHHHhhc
Q 003978 748 CRP-----SFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 748 ~RP-----s~~ell~~L~~L~~~~~~~ 769 (782)
+|| ++.++ +.|+||..
T Consensus 236 ~R~~~~~~~~~~~------l~h~~~~~ 256 (323)
T cd05595 236 QRLGGGPSDAKEV------MEHRFFLS 256 (323)
T ss_pred HhCCCCCCCHHHH------HcCCCcCC
Confidence 998 89998 45677754
No 43
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.6e-41 Score=347.39 Aligned_cols=264 Identities=23% Similarity=0.302 Sum_probs=222.1
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeee--cCCceeE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT--SPQRLCI 579 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~--~~~~~~l 579 (782)
.++|+.+..|++|+||.||+|+++ ++-||+|.++...-....--.-.+||.+|.+++|||||.+-.+.. .-+.+||
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 357899999999999999999984 556999999877654444455678999999999999999988865 3456999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
|||||+. +|..++.....+|....+..++.|+++||+|||.++ |+||||||+|+|++..|.+||+|||+|+.+..+.
T Consensus 155 VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~w--ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~ 231 (419)
T KOG0663|consen 155 VMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNW--ILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL 231 (419)
T ss_pred eHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhce--eEecccchhheeeccCCcEEecccchhhhhcCCc
Confidence 9999976 999999888889999999999999999999999999 9999999999999999999999999999888775
Q ss_pred ccccCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc---------------
Q 003978 660 LTTKTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR--------------- 723 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~~~~-~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~--------------- 723 (782)
......+-|..|+|||++.|.. |+.+.|+||+||++.||+++++-|.+......+..|-.....
T Consensus 232 k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~ 311 (419)
T KOG0663|consen 232 KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAV 311 (419)
T ss_pred ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchh
Confidence 5555567799999999998854 799999999999999999999999988777666554221110
Q ss_pred --------------cCCCCC-CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcCCC
Q 003978 724 --------------LEIPKD-VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVGD 776 (782)
Q Consensus 724 --------------~~~p~~-~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~~~ 776 (782)
..++.. ++..-.+|+..+|..||.+|.|+.+. |.|.||...+.+..+
T Consensus 312 k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~------L~h~~F~e~P~p~~P 373 (419)
T KOG0663|consen 312 KKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDG------LKHEYFRETPLPIDP 373 (419)
T ss_pred hccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHh------hcccccccCCCCCCh
Confidence 011111 55778999999999999999999998 778999886665543
No 44
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.6e-40 Score=356.23 Aligned_cols=254 Identities=24% Similarity=0.351 Sum_probs=209.3
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
.++|++.++||.|+||.||+|.. .+..||+|+++..... .....+.+|+.+++.++||||+++++++......|+||
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF 82 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC-CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence 35799999999999999999987 4677999998654321 22345678999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
||+++ +|.+++......+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++........
T Consensus 83 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~ 159 (288)
T cd07871 83 EYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRK--ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKT 159 (288)
T ss_pred eCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCCCCEEECcCcceeeccCCCcc
Confidence 99965 999999776667889999999999999999999998 999999999999999999999999998765433333
Q ss_pred ccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc-----------------
Q 003978 662 TKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR----------------- 723 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~----------------- 723 (782)
.....|++.|+|||++.+ ..++.++|||||||++|+|++|..||...+..+.+..+......
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd07871 160 YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRS 239 (288)
T ss_pred ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhc
Confidence 344578999999999876 56789999999999999999999999877665544333111000
Q ss_pred -----------cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 724 -----------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 724 -----------~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
......++.++.+||.+||..||.+|||+.++ +.|+||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~------l~hp~f 288 (288)
T cd07871 240 YLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAA------LRHSYF 288 (288)
T ss_pred cccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHH------hcCCCC
Confidence 00113467899999999999999999999999 566775
No 45
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=6.1e-41 Score=369.05 Aligned_cols=255 Identities=25% Similarity=0.449 Sum_probs=219.3
Q ss_pred cceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCH-HHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
++|++.+.||+|+||.||+|... ++.||||+++...... .....+..|+.++..++||||+++++++..++.+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47999999999999999999985 7889999998654322 45567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc--
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY-- 659 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~-- 659 (782)
||+.+++|.+++... ..+++..++.++.||+.||+|||++| |+||||||+||||+.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g--iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~ 157 (350)
T cd05573 81 EYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLG--FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDR 157 (350)
T ss_pred cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCCCCEEeecCCCCccCcccCcc
Confidence 999999999999765 56899999999999999999999988 9999999999999999999999999987654332
Q ss_pred ---------------------------ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 003978 660 ---------------------------LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ 712 (782)
Q Consensus 660 ---------------------------~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~ 712 (782)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||...+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~ 237 (350)
T cd05573 158 EYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQE 237 (350)
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHH
Confidence 12234579999999999999999999999999999999999999999888766
Q ss_pred HHHHhhccccccCCCC--CCCHHHHHHHHHhhhhCCCCCCC-HHHHHHHHHHHHHHHhhc
Q 003978 713 VIGAVGFMNQRLEIPK--DVDPRWAAIVESCWHSDPQCRPS-FQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 713 ~~~~i~~~~~~~~~p~--~~~~~l~~LI~~cL~~dP~~RPs-~~ell~~L~~L~~~~~~~ 769 (782)
....+........+|. .+++++.+||.+||. ||.+||+ +.++ +.|+||+.
T Consensus 238 ~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~l------l~hp~~~~ 290 (350)
T cd05573 238 TYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEI------KSHPFFKG 290 (350)
T ss_pred HHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHH------hcCCCcCC
Confidence 6655544223333333 369999999999997 9999999 9999 56788754
No 46
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.1e-40 Score=361.95 Aligned_cols=246 Identities=27% Similarity=0.430 Sum_probs=212.2
Q ss_pred eccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCCCCH
Q 003978 513 IGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSL 589 (782)
Q Consensus 513 IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ggsL 589 (782)
||+|+||.||++.+. ++.||+|++++... .......+.+|+.+++.++||||+++++++..++.+|+||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 799999999999984 66799999976432 334456778899999999999999999999999999999999999999
Q ss_pred HHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCCCCC
Q 003978 590 FRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTP 669 (782)
Q Consensus 590 ~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~ 669 (782)
.+++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.............||+
T Consensus 81 ~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 157 (312)
T cd05585 81 FHHLQRE-GRFDLSRARFYTAELLCALENLHKFN--VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTP 157 (312)
T ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCc
Confidence 9999764 46899999999999999999999998 99999999999999999999999999875433333334557999
Q ss_pred cccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCC
Q 003978 670 QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCR 749 (782)
Q Consensus 670 ~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~R 749 (782)
.|+|||++.+..++.++|||||||++|+|++|..||...+.......+ ......++..+++++.+||.+||..||.+|
T Consensus 158 ~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dp~~R 235 (312)
T cd05585 158 EYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKI--LQEPLRFPDGFDRDAKDLLIGLLSRDPTRR 235 (312)
T ss_pred ccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHH--HcCCCCCCCcCCHHHHHHHHHHcCCCHHHc
Confidence 999999999999999999999999999999999999887776665554 344566788899999999999999999999
Q ss_pred CC---HHHHHHHHHHHHHHHhhc
Q 003978 750 PS---FQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 750 Ps---~~ell~~L~~L~~~~~~~ 769 (782)
|+ +.++ +.|+||+.
T Consensus 236 ~~~~~~~e~------l~hp~~~~ 252 (312)
T cd05585 236 LGYNGAQEI------KNHPFFSQ 252 (312)
T ss_pred CCCCCHHHH------HcCCCcCC
Confidence 75 6777 56777765
No 47
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.3e-40 Score=364.22 Aligned_cols=248 Identities=26% Similarity=0.471 Sum_probs=212.8
Q ss_pred eeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCCC
Q 003978 511 EQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRG 587 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg 587 (782)
+.||+|+||.||++.. .++.||||++.+... .......+.+|+++++.++||||+++++++..++.+|+||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999987 467899999976543 2344567888999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCCC
Q 003978 588 SLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKG 667 (782)
Q Consensus 588 sL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~G 667 (782)
+|..++... ..+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+++............+|
T Consensus 81 ~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 157 (328)
T cd05593 81 ELFFHLSRE-RVFSEDRTRFYGAEIVSALDYLHSGK--IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCG 157 (328)
T ss_pred CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccC
Confidence 999998764 46899999999999999999999998 999999999999999999999999998754332223334579
Q ss_pred CCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCC
Q 003978 668 TPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQ 747 (782)
Q Consensus 668 t~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~ 747 (782)
|+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+ ......+|..+++++.+||.+||..||.
T Consensus 158 t~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~--~~~~~~~p~~~~~~~~~li~~~L~~dP~ 235 (328)
T cd05593 158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI--LMEDIKFPRTLSADAKSLLSGLLIKDPN 235 (328)
T ss_pred CcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHh--ccCCccCCCCCCHHHHHHHHHHcCCCHH
Confidence 99999999999999999999999999999999999999887766655544 2345567888999999999999999999
Q ss_pred CCC-----CHHHHHHHHHHHHHHHhhc
Q 003978 748 CRP-----SFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 748 ~RP-----s~~ell~~L~~L~~~~~~~ 769 (782)
+|| ++.+++ .|+||..
T Consensus 236 ~R~~~~~~~~~~il------~h~~~~~ 256 (328)
T cd05593 236 KRLGGGPDDAKEIM------RHSFFTG 256 (328)
T ss_pred HcCCCCCCCHHHHh------cCCCcCC
Confidence 997 899994 5566643
No 48
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2.6e-40 Score=357.07 Aligned_cols=261 Identities=26% Similarity=0.361 Sum_probs=211.4
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
++|++.++||+|+||.||+|.. .++.||||++....... ....+.+|+.+++.++||||+++++++..+...|+|||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG-TPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccc-cchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 6899999999999999999997 46789999987543221 22456789999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
|+. ++|.+++......+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++..........
T Consensus 84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 160 (303)
T cd07869 84 YVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRY--ILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTY 160 (303)
T ss_pred CCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEECCCCcceeccCCCccC
Confidence 994 6888888776667899999999999999999999999 9999999999999999999999999987544333333
Q ss_pred cCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH-HHHHhhcccccc----------------
Q 003978 663 KTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ-VIGAVGFMNQRL---------------- 724 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~-~~~~i~~~~~~~---------------- 724 (782)
....||+.|+|||++.+ ..++.++|||||||++|+|++|..||....... .+..+......+
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (303)
T cd07869 161 SNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKP 240 (303)
T ss_pred CCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcccccc
Confidence 45578999999999876 457889999999999999999999998764332 222211100000
Q ss_pred ---C--CC---------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcCC
Q 003978 725 ---E--IP---------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVG 775 (782)
Q Consensus 725 ---~--~p---------~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~~ 775 (782)
. .+ ..+++.+.+||.+||+.||.+|||+.++ +.|+||+.....+-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~------l~h~~f~~~~~~~~ 299 (303)
T cd07869 241 ERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAA------LSHEYFSDLPPRLW 299 (303)
T ss_pred ccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHH------hcCcccccCChhhh
Confidence 0 00 1245688999999999999999999999 67999998766543
No 49
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.9e-40 Score=361.91 Aligned_cols=251 Identities=24% Similarity=0.427 Sum_probs=212.5
Q ss_pred eeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHH---HhCCCCceeEEeeeeecCCceeEE
Q 003978 507 LTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLM---KRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 507 y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il---~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
|++.+.||+|+||.||++.+ .++.||||++++... .......+.+|++++ +.++||||+++++++...+.+|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 67899999999999999987 467899999986542 223445666776665 456799999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 660 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 660 (782)
|||+.+++|..++.. ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++........
T Consensus 81 ~E~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~--ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05589 81 MEYAAGGDLMMHIHT--DVFSEPRAVFYAACVVLGLQYLHENK--IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD 156 (324)
T ss_pred EcCCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCC--eEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC
Confidence 999999999988864 35899999999999999999999998 99999999999999999999999999875433333
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHH
Q 003978 661 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVES 740 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~ 740 (782)
......|++.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....+|..+++.+.+||.+
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~--~~~~~~p~~~~~~~~~li~~ 234 (324)
T cd05589 157 RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIV--NDEVRYPRFLSREAISIMRR 234 (324)
T ss_pred cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHH--hCCCCCCCCCCHHHHHHHHH
Confidence 3345679999999999999999999999999999999999999999887776665553 33455778899999999999
Q ss_pred hhhhCCCCCC-----CHHHHHHHHHHHHHHHhhc
Q 003978 741 CWHSDPQCRP-----SFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 741 cL~~dP~~RP-----s~~ell~~L~~L~~~~~~~ 769 (782)
||..||.+|| ++.++ +.|+||+.
T Consensus 235 ~L~~dP~~R~~~~~~~~~~l------~~~~~f~~ 262 (324)
T cd05589 235 LLRRNPERRLGSGEKDAEDV------KKQPFFRD 262 (324)
T ss_pred HhhcCHhHcCCCCCCCHHHH------hhCCCcCC
Confidence 9999999999 57777 45666644
No 50
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-42 Score=340.25 Aligned_cols=256 Identities=23% Similarity=0.370 Sum_probs=224.3
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
.+.|.+.+.||+|.|+.||++.+ .|+.+|+|++....+.....+.+.+|++|.+.|+|||||++.+.+......|||+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 35788999999999999999987 6788999999877776666788999999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc---CCCcEEEEecCCCcccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD---KHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~---~~~~vkL~DFGla~~~~~~ 658 (782)
|+|.|++|..-|-.. ..+++..+-..+.||+.+|.|+|.++ |||||+||+|+|+. +...|||+|||+|.... .
T Consensus 90 e~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n~--IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~-~ 165 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSNG--IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN-D 165 (355)
T ss_pred ecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcC--ceeccCChhheeeeeccCCCceeecccceEEEeC-C
Confidence 999999997655433 45889999999999999999999999 99999999999994 34569999999998776 4
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccC--CCCCCCHHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE--IPKDVDPRWAA 736 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~--~p~~~~~~l~~ 736 (782)
......++|||.|||||++...+|+..+|||+-|++||-|+.|.+||.+.+....++.|........ ..+.++++.++
T Consensus 166 g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~ 245 (355)
T KOG0033|consen 166 GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKS 245 (355)
T ss_pred ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHH
Confidence 5556678999999999999999999999999999999999999999999888888888855444332 33578999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 737 IVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 737 LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
||++||..||.+|.|+.|. |.|+|.+.
T Consensus 246 LvrrML~~dP~kRIta~EA------L~HpWi~~ 272 (355)
T KOG0033|consen 246 LIRRMLTVNPKKRITADEA------LKHPWICN 272 (355)
T ss_pred HHHHHhccChhhhccHHHH------hCCchhcc
Confidence 9999999999999999998 56677643
No 51
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=4.1e-40 Score=351.91 Aligned_cols=254 Identities=20% Similarity=0.289 Sum_probs=209.1
Q ss_pred cceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
++|++.+.||+|+||.||++.+. ++.||||++............+.+|+.+++.++||||+++++++..++.+|+|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 47999999999999999999984 5679999997665444556678889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc-c
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL-T 661 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~-~ 661 (782)
|+.++.+..+. .....+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++........ .
T Consensus 81 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (287)
T cd07848 81 YVEKNMLELLE-EMPNGVPPEKVRSYIYQLIKAIHWCHKND--IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNAN 157 (287)
T ss_pred cCCCCHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCcEEEeeccCccccccccccc
Confidence 99886665444 34456899999999999999999999998 99999999999999999999999999976543221 2
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc-----------------c
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR-----------------L 724 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~-----------------~ 724 (782)
.....|++.|+|||++.+..++.++|||||||++|+|++|+.||...+.......+...... .
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07848 158 YTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGL 237 (287)
T ss_pred ccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhccc
Confidence 22346899999999999988999999999999999999999999877654433322111000 0
Q ss_pred -------------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 725 -------------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 725 -------------~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
.....++.++.+||.+||..||++|||+.++ |.|+||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~------l~hp~f 287 (287)
T cd07848 238 RFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQC------LNHPAF 287 (287)
T ss_pred ccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHH------hcCCCC
Confidence 0112367889999999999999999999999 556775
No 52
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=4.8e-40 Score=364.68 Aligned_cols=255 Identities=23% Similarity=0.370 Sum_probs=213.4
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
++|++++.||+|+||.||+|.. .++.||||++++... .......+..|+.++..++||||+++++.+.....+|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 4799999999999999999987 467899999976433 2344567888999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc-
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL- 660 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~- 660 (782)
|||+||+|.+++... ..+++..+..++.|++.||+|||++| |+||||||+||||+.++.+||+|||+++.......
T Consensus 81 E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~g--ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~ 157 (363)
T cd05628 81 EFLPGGDMMTLLMKK-DTLTEEETQFYIAETVLAIDSIHQLG--FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRT 157 (363)
T ss_pred cCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eEecCCCHHHeEECCCCCEEEeeccCcccccccccc
Confidence 999999999999764 46899999999999999999999998 99999999999999999999999999864322100
Q ss_pred ----------------------------------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCC
Q 003978 661 ----------------------------------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWD 706 (782)
Q Consensus 661 ----------------------------------~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~ 706 (782)
.....+||+.|+|||++.+..++.++|||||||++|||++|..||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~ 237 (363)
T cd05628 158 EFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (363)
T ss_pred cccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCC
Confidence 0123479999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHhhccccccCCCC--CCCHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHHhhc
Q 003978 707 NLNSMQVIGAVGFMNQRLEIPK--DVDPRWAAIVESCWHSDPQ---CRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 707 ~~~~~~~~~~i~~~~~~~~~p~--~~~~~l~~LI~~cL~~dP~---~RPs~~ell~~L~~L~~~~~~~ 769 (782)
..+.......+........+|+ .+++++++||.+|+. +|. .||++.++ +.|+||+.
T Consensus 238 ~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei------~~hp~f~~ 298 (363)
T cd05628 238 SETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEI------KTNPFFEG 298 (363)
T ss_pred CCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHH------hCCCCCCC
Confidence 8887776666644333344443 478999999999764 444 46899999 56777753
No 53
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.4e-40 Score=361.16 Aligned_cols=248 Identities=25% Similarity=0.413 Sum_probs=212.2
Q ss_pred eeeccCCcEEEEEEEE-----cCCeEEEEEEeccCC--CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 511 EQIGQGSCGTVYHAVW-----YGSDVAVKVFSRQEY--SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~-----~~~~vAiK~~~~~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
++||+|+||.||++.. .++.||||++++... .......+..|+.+|+.++||||+++++++..++.+|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999975 466799999976433 123345677899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccccc
Q 003978 584 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTK 663 (782)
Q Consensus 584 ~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 663 (782)
+.+++|.+++.... .+.+..+..++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++..........
T Consensus 82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (323)
T cd05584 82 LSGGELFMHLEREG-IFMEDTACFYLSEISLALEHLHQQG--IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTH 158 (323)
T ss_pred CCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccc
Confidence 99999999997643 5788888899999999999999998 99999999999999999999999999875433333334
Q ss_pred CCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhh
Q 003978 664 TGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWH 743 (782)
Q Consensus 664 ~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~ 743 (782)
...||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....+|..+++++.+||.+||.
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~ 236 (323)
T cd05584 159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKIL--KGKLNLPPYLTPEARDLLKKLLK 236 (323)
T ss_pred ccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHHHHHHHHHcc
Confidence 4579999999999999889999999999999999999999999887766665553 34556788899999999999999
Q ss_pred hCCCCCC-----CHHHHHHHHHHHHHHHhhc
Q 003978 744 SDPQCRP-----SFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 744 ~dP~~RP-----s~~ell~~L~~L~~~~~~~ 769 (782)
.||++|| ++.++ +.|+||+.
T Consensus 237 ~~p~~R~~~~~~~~~~l------~~h~~~~~ 261 (323)
T cd05584 237 RNPSSRLGAGPGDAAEV------QSHPFFRH 261 (323)
T ss_pred cCHhHcCCCCCCCHHHH------hcCCCcCC
Confidence 9999999 88888 45677643
No 54
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.5e-39 Score=344.35 Aligned_cols=256 Identities=25% Similarity=0.444 Sum_probs=218.1
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc-----CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY-----GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~-----~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
..++|++.+.||+|+||.||++.+. +..||+|.++... .......+.+|+.+++.++||||+++++++...+..
T Consensus 3 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 3 DNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC-SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTM 81 (266)
T ss_pred chHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCc
Confidence 3568999999999999999999753 4469999987543 334456788999999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
++||||+++++|.+++......+++..++.++.||+.||+|||+++ ++||||||+|||++.++.++|+|||.+.....
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~--iiH~dikp~nili~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMG--YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence 9999999999999999876667899999999999999999999998 99999999999999999999999998764322
Q ss_pred cc-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHH
Q 003978 658 TY-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWA 735 (782)
Q Consensus 658 ~~-~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~ 735 (782)
.. .......++..|+|||++.+..++.++|||||||++|+|++ |..||...........+.. ......+..++..+.
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 238 (266)
T cd05064 160 EAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVED-GFRLPAPRNCPNLLH 238 (266)
T ss_pred cchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHC-CCCCCCCCCCCHHHH
Confidence 21 11223345678999999999999999999999999999775 9999998887766655532 234456778999999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
+++.+||..+|.+||++.+|++.|.++
T Consensus 239 ~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 239 QLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 999999999999999999999988764
No 55
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.3e-40 Score=366.94 Aligned_cols=256 Identities=23% Similarity=0.389 Sum_probs=216.3
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
++|++++.||+|+||.||++.. .++.||||++..... .......+.+|+.+|..++||||+++++++..+..+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 4799999999999999999987 467899999976543 2345567888999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc-
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL- 660 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~- 660 (782)
|||.+++|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+||||+.++.+||+|||++........
T Consensus 81 E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (364)
T cd05599 81 EYLPGGDMMTLLMKKD-TFTEEETRFYIAETILAIDSIHKLG--YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRT 157 (364)
T ss_pred CCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECCCCCEEEeecccceeccccccc
Confidence 9999999999997643 6899999999999999999999999 99999999999999999999999999864321100
Q ss_pred -------------------------------------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCC
Q 003978 661 -------------------------------------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI 703 (782)
Q Consensus 661 -------------------------------------~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~ 703 (782)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~ 237 (364)
T cd05599 158 EFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYP 237 (364)
T ss_pred cccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCC
Confidence 0112469999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHhhccccccCCCC--CCCHHHHHHHHHhhhhCCCCCCC---HHHHHHHHHHHHHHHhhcc
Q 003978 704 PWDNLNSMQVIGAVGFMNQRLEIPK--DVDPRWAAIVESCWHSDPQCRPS---FQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 704 Pf~~~~~~~~~~~i~~~~~~~~~p~--~~~~~l~~LI~~cL~~dP~~RPs---~~ell~~L~~L~~~~~~~~ 770 (782)
||...+.......+........++. .+++++++||.+||. +|.+|++ +.++ +.|+||+..
T Consensus 238 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~l------l~h~~~~~~ 302 (364)
T cd05599 238 PFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEI------KSHPFFKGV 302 (364)
T ss_pred CCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHH------hcCCCcCCC
Confidence 9998887776665543333334443 478999999999996 9999997 9998 667887543
No 56
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=4.8e-40 Score=358.79 Aligned_cols=253 Identities=25% Similarity=0.410 Sum_probs=214.2
Q ss_pred ceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCC-ceeEEeeeeecCCceeEEE
Q 003978 506 DLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHP-NVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~Hp-nIv~l~~~~~~~~~~~lv~ 581 (782)
+|++++.||+|+||.||+|... ++.||||++.+... .......+..|++++..+.|+ +|+++++++...+.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 5899999999999999999875 45799999976543 234456778899999999764 6888999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.........
T Consensus 81 E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~ 157 (324)
T cd05587 81 EYVNGGDLMYHIQQV-GKFKEPHAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKT 157 (324)
T ss_pred cCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCc
Confidence 999999999999764 36889999999999999999999998 999999999999999999999999998643322223
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHh
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 741 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~c 741 (782)
.....||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....+|..++.++.+||.+|
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~li~~~ 235 (324)
T cd05587 158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIM--EHNVSYPKSLSKEAVSICKGL 235 (324)
T ss_pred eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHHHHHHHHH
Confidence 334579999999999999999999999999999999999999999888777666653 344567788999999999999
Q ss_pred hhhCCCCCCCH-----HHHHHHHHHHHHHHhhc
Q 003978 742 WHSDPQCRPSF-----QELVDKLRDLQRQYFQA 769 (782)
Q Consensus 742 L~~dP~~RPs~-----~ell~~L~~L~~~~~~~ 769 (782)
|..||.+|++. .++ +.|+||+.
T Consensus 236 l~~~P~~R~~~~~~~~~~~------~~hp~~~~ 262 (324)
T cd05587 236 LTKHPAKRLGCGPTGERDI------REHAFFRR 262 (324)
T ss_pred hhcCHHHcCCCCCCCHHHH------hcCCCcCC
Confidence 99999999976 566 45566643
No 57
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.4e-40 Score=363.09 Aligned_cols=248 Identities=26% Similarity=0.484 Sum_probs=212.0
Q ss_pred eeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCCC
Q 003978 511 EQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRG 587 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg 587 (782)
+.||+|+||.||++.+ .+..||+|++++... .......+..|+++++.++||||+++++++..+..+|+||||++++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999987 567899999986543 2334566778999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhc-CCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003978 588 SLFRLLQRNTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 666 (782)
Q Consensus 588 sL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~-~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 666 (782)
+|..++... ..+++..++.++.||+.||.|||+ .+ |+||||||+||||+.++.+||+|||+++.............
T Consensus 81 ~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~~--ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (325)
T cd05594 81 ELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC 157 (325)
T ss_pred cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhcCC--EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccccccc
Confidence 999998764 468999999999999999999997 68 99999999999999999999999999875433322333457
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCC
Q 003978 667 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDP 746 (782)
Q Consensus 667 Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP 746 (782)
||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+ ......+|..+++++.+||.+||..||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i--~~~~~~~p~~~~~~~~~li~~~L~~dP 235 (325)
T cd05594 158 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI--LMEEIRFPRTLSPEAKSLLSGLLKKDP 235 (325)
T ss_pred CCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHH--hcCCCCCCCCCCHHHHHHHHHHhhcCH
Confidence 999999999999999999999999999999999999999887766655554 234556778899999999999999999
Q ss_pred CCCC-----CHHHHHHHHHHHHHHHhhc
Q 003978 747 QCRP-----SFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 747 ~~RP-----s~~ell~~L~~L~~~~~~~ 769 (782)
++|+ ++.++ +.|+||+.
T Consensus 236 ~~R~~~~~~~~~~i------l~h~~~~~ 257 (325)
T cd05594 236 KQRLGGGPDDAKEI------MQHKFFAG 257 (325)
T ss_pred HHhCCCCCCCHHHH------hcCCCcCC
Confidence 9996 89999 45667653
No 58
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.1e-39 Score=354.87 Aligned_cols=256 Identities=24% Similarity=0.382 Sum_probs=213.8
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
..++|++++.||+|+||.||++.+. +..+|+|++.... .......+.+|+++|+.++||||+++++++..++.+++|
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (331)
T cd06649 3 KDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (331)
T ss_pred CcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 4578999999999999999999985 6679999987542 345567889999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcC-CCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC-NPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~-~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
|||+++++|.+++.... .+++..+..++.|++.||.|||+. + |+|+||||+|||++.++.+||+|||++......
T Consensus 82 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 157 (331)
T cd06649 82 MEHMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 157 (331)
T ss_pred eecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHhhcCC--EEcCCCChhhEEEcCCCcEEEccCccccccccc-
Confidence 99999999999997643 588999999999999999999974 5 999999999999999999999999998755432
Q ss_pred ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhc--------------------
Q 003978 660 LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGF-------------------- 719 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~-------------------- 719 (782)
......|++.|+|||++.+..++.++|||||||++|+|++|+.||...+.......+..
T Consensus 158 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (331)
T cd06649 158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPP 236 (331)
T ss_pred -ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccc
Confidence 22345789999999999999999999999999999999999999976655433222110
Q ss_pred -------------------------cccccCC-CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 720 -------------------------MNQRLEI-PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 720 -------------------------~~~~~~~-p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
....+.. ...+++++++||.+||..||++|||+.++ +.|+||+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~el------l~h~~~~~~ 307 (331)
T cd06649 237 GRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKML------MNHTFIKRS 307 (331)
T ss_pred cccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHH------hcChHHhhc
Confidence 0001111 12468899999999999999999999999 567888754
No 59
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3e-40 Score=359.95 Aligned_cols=255 Identities=27% Similarity=0.399 Sum_probs=213.1
Q ss_pred eeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCceeEEEeecCC
Q 003978 511 EQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIVTEFLPR 586 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lv~E~~~g 586 (782)
+.||+|+||.||+|..+ ++.||||++.+... .......+..|+.++..+ +||||+++++++...+.+|+|||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999874 66799999976532 233456677888888876 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003978 587 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 666 (782)
Q Consensus 587 gsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 666 (782)
++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..............
T Consensus 81 g~L~~~i~~~-~~l~~~~~~~~~~ql~~~L~~lH~~~--ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (320)
T cd05590 81 GDLMFHIQKS-RRFDEARARFYAAEITSALMFLHDKG--IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFC 157 (320)
T ss_pred chHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccc
Confidence 9999998764 46899999999999999999999998 99999999999999999999999999875433323334557
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCC
Q 003978 667 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDP 746 (782)
Q Consensus 667 Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP 746 (782)
||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....++..++.++.+||.+||..||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~li~~~L~~dP 235 (320)
T cd05590 158 GTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL--NDEVVYPTWLSQDAVDILKAFMTKNP 235 (320)
T ss_pred cCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHh--cCCCCCCCCCCHHHHHHHHHHcccCH
Confidence 9999999999999999999999999999999999999999888777666653 34456677899999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 747 QCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 747 ~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
.+||++.++...-+-+.|+||+..
T Consensus 236 ~~R~~~~~~~~~~~~~~h~~f~~~ 259 (320)
T cd05590 236 TMRLGSLTLGGEEAILRHPFFKEL 259 (320)
T ss_pred HHCCCCCCCCCHHHHHcCCCcCCC
Confidence 999998332111122678888653
No 60
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.2e-39 Score=356.47 Aligned_cols=258 Identities=26% Similarity=0.404 Sum_probs=207.3
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC-----Ccee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP-----QRLC 578 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-----~~~~ 578 (782)
+|++.++||+|+||.||+|.. .+..||||++............+.+|+.+++.++||||+++++++... ..+|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 589999999999999999987 467899999875433333445788999999999999999999987543 2479
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
+||||| +++|.+++.... .+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 81 VVFELM-ESDLHQVIKAND-DLTPEHHQFFLYQLLRALKYIHTAN--VFHRDLKPKNILANADCKLKICDFGLARVAFND 156 (338)
T ss_pred EEEecC-CCCHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence 999999 569999987643 5899999999999999999999999 999999999999999999999999998754322
Q ss_pred c---ccccCCCCCCcccCcccccC--CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhc--------------
Q 003978 659 Y---LTTKTGKGTPQWMAPEVLRN--EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGF-------------- 719 (782)
Q Consensus 659 ~---~~~~~~~Gt~~y~aPE~l~~--~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~-------------- 719 (782)
. .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+.......+..
T Consensus 157 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 236 (338)
T cd07859 157 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVR 236 (338)
T ss_pred cCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence 1 11234578999999999876 5688999999999999999999999987654332211100
Q ss_pred ----------ccccc-----CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 720 ----------MNQRL-----EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 720 ----------~~~~~-----~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
..... ...+.+++.+.+||.+||..||++||++.++ +.|+||+.....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~------l~hp~f~~~~~~ 299 (338)
T cd07859 237 NEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEA------LADPYFKGLAKV 299 (338)
T ss_pred hhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHH------hcCchhhhcCcc
Confidence 00000 0113467889999999999999999999999 678999776554
No 61
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=7.1e-40 Score=365.76 Aligned_cols=255 Identities=21% Similarity=0.319 Sum_probs=212.2
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
.|++++.||+|+||.||+|.+ .++.||||++..... .......+.+|+.+++.++|||||++++++.....+|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 589999999999999999987 456799999976543 34456778999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc---
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY--- 659 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~--- 659 (782)
||++|+|.+++.... .+++..+..++.||+.||.|||.++ |+||||||+||||+.++++||+|||++.......
T Consensus 82 ~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~~LH~~g--ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~ 158 (381)
T cd05626 82 YIPGGDMMSLLIRME-VFPEVLARFYIAELTLAIESVHKMG--FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSK 158 (381)
T ss_pred cCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCcHHHEEECCCCCEEEeeCcCCcccccccccc
Confidence 999999999997643 5889999999999999999999998 9999999999999999999999999875321000
Q ss_pred --------------------------------------------ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHH
Q 003978 660 --------------------------------------------LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVIL 695 (782)
Q Consensus 660 --------------------------------------------~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll 695 (782)
......+||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il 238 (381)
T cd05626 159 YYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL 238 (381)
T ss_pred cccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHH
Confidence 001234799999999999999899999999999999
Q ss_pred HHHHcCCCCCCCCChHHHHHHhhccccccCCCC--CCCHHHHHHHHHhh--hhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 696 WELATEKIPWDNLNSMQVIGAVGFMNQRLEIPK--DVDPRWAAIVESCW--HSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 696 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~--~~~~~l~~LI~~cL--~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
|||++|..||...+.......+........+|. .+++++.+||.+|+ ..++..||++.++ +.|+||+.
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~------l~hp~f~~ 310 (381)
T cd05626 239 FEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDI------KAHPFFSE 310 (381)
T ss_pred HHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHH------hcCcccCC
Confidence 999999999988776655544433233333443 58999999999955 5556669999999 56888865
No 62
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-41 Score=368.77 Aligned_cols=258 Identities=28% Similarity=0.489 Sum_probs=228.9
Q ss_pred cceeEeeeeccCCcEEEEEEEEcCCe--EEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWYGSD--VAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~~~~--vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
+.|.|+..||.|+||+||++..+... .|-|++... ..+.++.+.-||+||..++||+||++++.|+.++.++|++|
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk--seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliE 109 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK--SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIE 109 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc--chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEe
Confidence 46788899999999999999876444 466776433 45667888999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
||.||-+..++-.-+..+.+..+..+++|++.||.|||+++ |||||||..|||++-+|.|+|+|||.+..........
T Consensus 110 FC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~--iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkR 187 (1187)
T KOG0579|consen 110 FCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQN--IIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKR 187 (1187)
T ss_pred ecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcc--hhhhhccccceEEEecCcEeeecccccccchhHHhhh
Confidence 99999999998877888999999999999999999999999 9999999999999999999999999987655555556
Q ss_pred cCCCCCCcccCccccc-----CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-ccCCCCCCCHHHHH
Q 003978 663 KTGKGTPQWMAPEVLR-----NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-RLEIPKDVDPRWAA 736 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~-----~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~-~~~~p~~~~~~l~~ 736 (782)
.++.|||.|||||+.. ..+|++++||||||++|.||..+.+|....+++.++-.+.+... .+..|..++..+.+
T Consensus 188 DsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~D 267 (1187)
T KOG0579|consen 188 DSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSD 267 (1187)
T ss_pred ccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHH
Confidence 6889999999999864 67899999999999999999999999999999999888865433 45567789999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 737 IVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 737 LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
|+++||.+||..||++.+| |+|+||+.+.+
T Consensus 268 fLk~cL~Knp~~Rp~aaql------l~Hpfv~~~~S 297 (1187)
T KOG0579|consen 268 FLKRCLVKNPRNRPPAAQL------LKHPFVQNAPS 297 (1187)
T ss_pred HHHHHHhcCCccCCCHHHH------hhCcccccCCc
Confidence 9999999999999999999 77899986654
No 63
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=4e-40 Score=367.12 Aligned_cols=255 Identities=23% Similarity=0.364 Sum_probs=213.3
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
++|+++++||+|+||.||++.. .++.||||++.+... .......+.+|+++++.++|||||++++++..+..+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 4799999999999999999987 567899999876432 3345677889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc-
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL- 660 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~- 660 (782)
|||++++|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+++.......
T Consensus 81 E~~~gg~L~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 157 (377)
T cd05629 81 EFLPGGDLMTMLIKY-DTFSEDVTRFYMAECVLAIEAVHKLG--FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDS 157 (377)
T ss_pred eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence 999999999999764 46889999999999999999999999 99999999999999999999999999863211000
Q ss_pred ----------------------------------------------cccCCCCCCcccCcccccCCCCCchhHHHHHHHH
Q 003978 661 ----------------------------------------------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVI 694 (782)
Q Consensus 661 ----------------------------------------------~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~l 694 (782)
.....+||+.|+|||++.+..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 237 (377)
T cd05629 158 AYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAI 237 (377)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchh
Confidence 0012469999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCChHHHHHHhhccccccCCCC--CCCHHHHHHHHHhhhhCCCCC---CCHHHHHHHHHHHHHHHhhc
Q 003978 695 LWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPK--DVDPRWAAIVESCWHSDPQCR---PSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 695 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~--~~~~~l~~LI~~cL~~dP~~R---Ps~~ell~~L~~L~~~~~~~ 769 (782)
+|||++|..||...+.......+........+|. .++.++++||.+||. +|.+| +++.++ +.|+||+.
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~------l~hp~~~~ 310 (377)
T cd05629 238 MFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEI------KSHPFFRG 310 (377)
T ss_pred hhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHH------hcCCCcCC
Confidence 9999999999988777666555543333344444 478999999999997 67765 599999 56788764
No 64
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=8.9e-40 Score=356.55 Aligned_cols=253 Identities=25% Similarity=0.418 Sum_probs=214.1
Q ss_pred ceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCceeEEE
Q 003978 506 DLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
+|.+.+.||+|+||.||+|.+. +..||||++++... .......+..|..++..+ .|++|+++++++...+.+|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 5889999999999999999874 45799999986543 223345567788888777 5899999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
||+++|+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+++........
T Consensus 81 E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~ 157 (323)
T cd05616 81 EYVNGGDLMYQIQQV-GRFKEPHAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT 157 (323)
T ss_pred cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--EEecCCCHHHeEECCCCcEEEccCCCceecCCCCCc
Confidence 999999999998764 36889999999999999999999998 999999999999999999999999998754333333
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHh
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 741 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~c 741 (782)
.....||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....+|..++.++.+||.+|
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~--~~~~~~p~~~s~~~~~li~~~ 235 (323)
T cd05616 158 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM--EHNVAYPKSMSKEAVAICKGL 235 (323)
T ss_pred cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHH--hCCCCCCCcCCHHHHHHHHHH
Confidence 345679999999999999999999999999999999999999999888777666653 334567788999999999999
Q ss_pred hhhCCCCCCCH-----HHHHHHHHHHHHHHhhc
Q 003978 742 WHSDPQCRPSF-----QELVDKLRDLQRQYFQA 769 (782)
Q Consensus 742 L~~dP~~RPs~-----~ell~~L~~L~~~~~~~ 769 (782)
|..||.+|++. .++ +.|+||+.
T Consensus 236 l~~~p~~R~~~~~~~~~~i------~~h~~~~~ 262 (323)
T cd05616 236 MTKHPGKRLGCGPEGERDI------KEHAFFRY 262 (323)
T ss_pred cccCHHhcCCCCCCCHHHH------hcCCCcCC
Confidence 99999999974 555 35666643
No 65
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.9e-40 Score=360.97 Aligned_cols=239 Identities=25% Similarity=0.412 Sum_probs=207.3
Q ss_pred eeeccCCcEEEEEEEE-----cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecC
Q 003978 511 EQIGQGSCGTVYHAVW-----YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLP 585 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~-----~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ 585 (782)
+.||+|+||.||++.. .++.||+|++............+..|+++++.++||||+++++++..++.+|+||||+.
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999875 46789999998654433344567789999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCC
Q 003978 586 RGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTG 665 (782)
Q Consensus 586 ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 665 (782)
+++|.+++.+. ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++.............
T Consensus 82 ~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 158 (318)
T cd05582 82 GGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 158 (318)
T ss_pred CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecc
Confidence 99999999764 46899999999999999999999999 9999999999999999999999999987654443333456
Q ss_pred CCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhC
Q 003978 666 KGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSD 745 (782)
Q Consensus 666 ~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~d 745 (782)
.|++.|+|||++.+..++.++|||||||++|+|++|+.||...+.......+. .....+|..+++.+.+||.+||..|
T Consensus 159 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~--~~~~~~p~~~~~~~~~li~~~l~~~ 236 (318)
T cd05582 159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMIL--KAKLGMPQFLSPEAQSLLRALFKRN 236 (318)
T ss_pred cCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHHHHHHHHHhhcC
Confidence 79999999999999889999999999999999999999999887776665553 3345677889999999999999999
Q ss_pred CCCCCCHHH
Q 003978 746 PQCRPSFQE 754 (782)
Q Consensus 746 P~~RPs~~e 754 (782)
|.+||++.+
T Consensus 237 P~~R~~a~~ 245 (318)
T cd05582 237 PANRLGAGP 245 (318)
T ss_pred HhHcCCCCC
Confidence 999999433
No 66
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=3.1e-40 Score=361.01 Aligned_cols=256 Identities=23% Similarity=0.404 Sum_probs=218.2
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
++|++.+.||+|+||.||++.. .++.||||+++.... ..+....+.+|+.+++.++||||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 4799999999999999999987 567899999986543 3345567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc-c
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY-L 660 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~-~ 660 (782)
||+++++|.+++......+++..+..++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++....... .
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~--i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~ 158 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMG--YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMV 158 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEcccCchHheEECCCCCEEeccCCCCeECCCCCce
Confidence 999999999999877667999999999999999999999998 9999999999999999999999999997654322 1
Q ss_pred cccCCCCCCcccCccccc------CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC--CCCCH
Q 003978 661 TTKTGKGTPQWMAPEVLR------NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP--KDVDP 732 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~------~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p--~~~~~ 732 (782)
......||+.|+|||++. +..++.++|||||||++|+|++|..||...........+........+| ..++.
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 238 (330)
T cd05601 159 NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSS 238 (330)
T ss_pred eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCH
Confidence 223457899999999987 4567789999999999999999999998887776666654333333333 35789
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 733 RWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 733 ~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
++.+||.+||. +|.+||++.++ +.|+||+.
T Consensus 239 ~~~~li~~ll~-~p~~R~t~~~l------~~h~~~~~ 268 (330)
T cd05601 239 DFLDLIQSLLC-GQKERLGYEGL------CCHPFFSK 268 (330)
T ss_pred HHHHHHHHHcc-ChhhCCCHHHH------hCCCCcCC
Confidence 99999999997 99999999999 67788764
No 67
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.5e-39 Score=362.35 Aligned_cols=262 Identities=25% Similarity=0.466 Sum_probs=216.6
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEc-------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeee
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWY-------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGA 570 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~-------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~ 570 (782)
.|....++|++++.||+|+||.||+|.+. +..||||+++.... .+....+.+|+.+++.+ +|+|||+++++
T Consensus 32 ~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~il~~l~~h~nIv~~~~~ 110 (374)
T cd05106 32 KWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH-TDEREALMSELKILSHLGQHKNIVNLLGA 110 (374)
T ss_pred cccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC-HHHHHHHHHHHHHHHhhccCCceeeEeeE
Confidence 34455679999999999999999999852 23699999875443 34456788999999999 89999999999
Q ss_pred eecCCceeEEEeecCCCCHHHHHhhcC-----------------------------------------------------
Q 003978 571 VTSPQRLCIVTEFLPRGSLFRLLQRNT----------------------------------------------------- 597 (782)
Q Consensus 571 ~~~~~~~~lv~E~~~ggsL~~~l~~~~----------------------------------------------------- 597 (782)
+...+.+|+|||||.+|+|.+++....
T Consensus 111 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (374)
T cd05106 111 CTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSS 190 (374)
T ss_pred ecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccc
Confidence 999999999999999999999985421
Q ss_pred ----------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc-
Q 003978 598 ----------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL- 660 (782)
Q Consensus 598 ----------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~- 660 (782)
.++++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 191 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g--iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~ 268 (374)
T cd05106 191 SSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN--CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNY 268 (374)
T ss_pred ccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC--EEeccCchheEEEeCCCeEEEeeceeeeeccCCcce
Confidence 24678889999999999999999998 99999999999999999999999999875433211
Q ss_pred -cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHH
Q 003978 661 -TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 738 (782)
Q Consensus 661 -~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI 738 (782)
......+++.|||||++.+..++.++|||||||++|+|++ |..||...........+.........+..+++++.++|
T Consensus 269 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 348 (374)
T cd05106 269 VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIM 348 (374)
T ss_pred eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHH
Confidence 1112335678999999998889999999999999999997 99999876554433333333334556667899999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHH
Q 003978 739 ESCWHSDPQCRPSFQELVDKLRDLQ 763 (782)
Q Consensus 739 ~~cL~~dP~~RPs~~ell~~L~~L~ 763 (782)
.+||..||.+||++.++++.|+++.
T Consensus 349 ~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 349 KMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred HHHcCCChhhCcCHHHHHHHHHHHh
Confidence 9999999999999999999998763
No 68
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-39 Score=358.50 Aligned_cols=259 Identities=28% Similarity=0.447 Sum_probs=227.4
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCH-HHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCc
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQR 576 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~-~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~ 576 (782)
+.....|++.+.||+|.||.||+|.. .|+.+|+|++.+..... .....+.+|+.+|+.+. |||||.++++|+....
T Consensus 31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~ 110 (382)
T KOG0032|consen 31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDS 110 (382)
T ss_pred ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCe
Confidence 34456899999999999999999987 47789999998776533 34568899999999998 9999999999999999
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC----CCcEEEEecCCC
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK----HWTVKVGDFGLS 652 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~----~~~vkL~DFGla 652 (782)
+++|||+|.||.|++.+... .+++..+..++.|++.++.|||+.| |+||||||+|||+.. ++.+|++|||++
T Consensus 111 ~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~g--vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla 186 (382)
T KOG0032|consen 111 VYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLG--VVHRDLKPENLLLASKDEGSGRIKLIDFGLA 186 (382)
T ss_pred EEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCC--ceeccCCHHHeeeccccCCCCcEEEeeCCCc
Confidence 99999999999999999776 3999999999999999999999999 999999999999953 358999999999
Q ss_pred cccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc--CCCCCC
Q 003978 653 RLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL--EIPKDV 730 (782)
Q Consensus 653 ~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~--~~p~~~ 730 (782)
..... .......+||+.|+|||++....|+..+||||+|+++|.|++|..||...........+....... .....+
T Consensus 187 ~~~~~-~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~i 265 (382)
T KOG0032|consen 187 KFIKP-GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDI 265 (382)
T ss_pred eEccC-CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCcccc
Confidence 87776 555667899999999999999999999999999999999999999999998887777775444322 233467
Q ss_pred CHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 731 DPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 731 ~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
+..+++||+.||..||..|+++.++| +|+|.+..
T Consensus 266 s~~akd~i~~ll~~dp~~R~ta~~~L------~HpWi~~~ 299 (382)
T KOG0032|consen 266 SESAKDFIRKLLEFDPRKRLTAAQAL------QHPWIKSI 299 (382)
T ss_pred CHHHHHHHHHhcccCcccCCCHHHHh------cCccccCC
Confidence 99999999999999999999999994 58998764
No 69
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=8.3e-40 Score=355.89 Aligned_cols=248 Identities=26% Similarity=0.440 Sum_probs=208.0
Q ss_pred eeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCceeEEEeecCC
Q 003978 511 EQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIVTEFLPR 586 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lv~E~~~g 586 (782)
++||+|+||.||+|.+. ++.||||+++.... .......+..|..++..+ +||||+++++++.....+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999874 56799999986543 223344556677777654 899999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003978 587 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 666 (782)
Q Consensus 587 gsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 666 (782)
++|..++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.............+
T Consensus 81 g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~--ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~ 157 (316)
T cd05592 81 GDLMFHIQSS-GRFDEARARFYAAEIICGLQFLHKKG--IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFC 157 (316)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcccccc
Confidence 9999999764 36899999999999999999999998 99999999999999999999999999975433333334557
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCC
Q 003978 667 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDP 746 (782)
Q Consensus 667 Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP 746 (782)
||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+. ...+.+|..++.++.+||.+||..||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~ll~~~l~~~P 235 (316)
T cd05592 158 GTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSIL--NDRPHFPRWISKEAKDCLSKLFERDP 235 (316)
T ss_pred CCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHHHHHHHHHccCCH
Confidence 9999999999999999999999999999999999999999888777666553 34556778899999999999999999
Q ss_pred CCCCCHH-HHHHHHHHHHHHHhhc
Q 003978 747 QCRPSFQ-ELVDKLRDLQRQYFQA 769 (782)
Q Consensus 747 ~~RPs~~-ell~~L~~L~~~~~~~ 769 (782)
.+||++. ++ +.|+||+.
T Consensus 236 ~~R~~~~~~l------~~h~~~~~ 253 (316)
T cd05592 236 TKRLGVDGDI------RQHPFFRG 253 (316)
T ss_pred HHcCCChHHH------HcCcccCC
Confidence 9999864 55 34566643
No 70
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=7.1e-40 Score=357.01 Aligned_cols=248 Identities=25% Similarity=0.399 Sum_probs=211.7
Q ss_pred eeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCceeEEEeecCC
Q 003978 511 EQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIVTEFLPR 586 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lv~E~~~g 586 (782)
++||+|+||.||+|... ++.||||++++... .......+..|++++..+ +||||+++++++..++.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999874 56799999976533 234456677889998876 799999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003978 587 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 666 (782)
Q Consensus 587 gsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 666 (782)
++|..++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..............
T Consensus 81 ~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (321)
T cd05591 81 GDLMFQIQRS-RKFDEPRSRFYAAEVTLALMFLHRHG--VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFC 157 (321)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCCCCEEEeecccceecccCCccccccc
Confidence 9999998764 46889999999999999999999998 99999999999999999999999999875433333334557
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCC
Q 003978 667 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDP 746 (782)
Q Consensus 667 Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP 746 (782)
||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....+|..++.++.+||.+||..||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~--~~~~~~p~~~~~~~~~ll~~~L~~dp 235 (321)
T cd05591 158 GTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESIL--HDDVLYPVWLSKEAVSILKAFMTKNP 235 (321)
T ss_pred cCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHHHHHHHHHhccCH
Confidence 9999999999999999999999999999999999999999888777766653 33455667789999999999999999
Q ss_pred CCCC-------CHHHHHHHHHHHHHHHhhc
Q 003978 747 QCRP-------SFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 747 ~~RP-------s~~ell~~L~~L~~~~~~~ 769 (782)
++|| ++.++ +.|+||..
T Consensus 236 ~~R~~~~~~~~~~~~~------~~hp~~~~ 259 (321)
T cd05591 236 NKRLGCVASQGGEDAI------KQHPFFKE 259 (321)
T ss_pred HHcCCCCCCCCCHHHH------hcCCccCC
Confidence 9999 78888 45677743
No 71
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=373.03 Aligned_cols=259 Identities=24% Similarity=0.453 Sum_probs=216.5
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEc-C-CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEee-eeec
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWY-G-SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMG-AVTS 573 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~-~-~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~-~~~~ 573 (782)
..+++...+++|.+.|.+|+|+.||+|... + ..||+|.+-.. ++..++.+++||++|+.|. |+|||.+++ ....
T Consensus 30 ~~~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~ 107 (738)
T KOG1989|consen 30 QTFTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAIN 107 (738)
T ss_pred eEEEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEecccccc
Confidence 445666778999999999999999999873 3 78999987654 5677899999999999996 999999999 3321
Q ss_pred ---C---CceeEEEeecCCCCHHHHHhh-cCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEE
Q 003978 574 ---P---QRLCIVTEFLPRGSLFRLLQR-NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKV 646 (782)
Q Consensus 574 ---~---~~~~lv~E~~~ggsL~~~l~~-~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL 646 (782)
+ ..++|+||||.||.|.+++.. -...|++..+++|+.|+|+|+++||.+.++|||||||-|||||+.+|++||
T Consensus 108 ~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KL 187 (738)
T KOG1989|consen 108 RSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKL 187 (738)
T ss_pred ccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEe
Confidence 1 246899999999999999964 234599999999999999999999999999999999999999999999999
Q ss_pred EecCCCcccccccccc---------cCCCCCCcccCcccc---cCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 003978 647 GDFGLSRLKHETYLTT---------KTGKGTPQWMAPEVL---RNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVI 714 (782)
Q Consensus 647 ~DFGla~~~~~~~~~~---------~~~~Gt~~y~aPE~l---~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~ 714 (782)
||||.++......... -...-|+.|+|||++ .+.+.+.|+|||+|||+||-||+...||......
T Consensus 188 CDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l--- 264 (738)
T KOG1989|consen 188 CDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL--- 264 (738)
T ss_pred CcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce---
Confidence 9999987433222111 111359999999986 5788999999999999999999999999875332
Q ss_pred HHhhccccccCCC--CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 715 GAVGFMNQRLEIP--KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 715 ~~i~~~~~~~~~p--~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
+| +...+.+| +.++..+++||..||+.||.+||++-+++.++-+|++
T Consensus 265 -aI--lng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 265 -AI--LNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred -eE--EeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 23 44445555 4789999999999999999999999999999998866
No 72
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=4.8e-39 Score=365.56 Aligned_cols=255 Identities=24% Similarity=0.343 Sum_probs=204.3
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC------
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP------ 574 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------ 574 (782)
..++|+++++||+|+||.||+|.. .++.||||.+.... ....+|+.+|+.++|||||++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 346899999999999999999987 56789999885432 2234699999999999999998876432
Q ss_pred --CceeEEEeecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC-cEEEEe
Q 003978 575 --QRLCIVTEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW-TVKVGD 648 (782)
Q Consensus 575 --~~~~lv~E~~~ggsL~~~l~~---~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~-~vkL~D 648 (782)
..+++|||||++ +|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+||||+.++ .+||+|
T Consensus 138 ~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~--IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 138 KNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF--ICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred CceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCcCHHHEEEcCCCCceeeec
Confidence 246799999964 78777643 3456899999999999999999999999 99999999999998664 699999
Q ss_pred cCCCcccccccccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-----
Q 003978 649 FGLSRLKHETYLTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ----- 722 (782)
Q Consensus 649 FGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~----- 722 (782)
||+++...... ......||+.|+|||++.+. .++.++|||||||+||+|++|.+||........+..+.....
T Consensus 215 FGla~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~ 293 (440)
T PTZ00036 215 FGSAKNLLAGQ-RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTED 293 (440)
T ss_pred cccchhccCCC-CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 99997654322 22345789999999998764 689999999999999999999999988765544433321100
Q ss_pred ----------------------ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 723 ----------------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 723 ----------------------~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
...+|...++++.+||.+||.+||.+|||+.++ |.|+||+..+..
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~------l~hp~f~~~~~~ 360 (440)
T PTZ00036 294 QLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEA------LADPFFDDLRDP 360 (440)
T ss_pred HHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHH------hCChhHHhhhcc
Confidence 011344578899999999999999999999999 678999876543
No 73
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=9.7e-40 Score=363.31 Aligned_cols=259 Identities=22% Similarity=0.351 Sum_probs=218.0
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
....++|++.++||+|+||.||++.. .+..||||++.+... .......+.+|+.+++.++||||+++++++..++.+
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~ 118 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL 118 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 34567999999999999999999987 467899999976433 223345577899999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|+|||||++|+|.+++... .+++..+..++.||+.||+|||+++ |+||||||+||||+.++.+||+|||++.....
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 119 YMVMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 9999999999999998653 4788889999999999999999998 99999999999999999999999999876543
Q ss_pred cc-ccccCCCCCCcccCcccccCC----CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCC--CC
Q 003978 658 TY-LTTKTGKGTPQWMAPEVLRNE----PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPK--DV 730 (782)
Q Consensus 658 ~~-~~~~~~~Gt~~y~aPE~l~~~----~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~--~~ 730 (782)
.. ......+||+.|+|||++.+. .++.++|||||||++|+|++|..||...+.......+........+|. .+
T Consensus 195 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 274 (370)
T cd05596 195 NGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEI 274 (370)
T ss_pred CCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCC
Confidence 22 123355799999999998754 367899999999999999999999998887766666644333344444 57
Q ss_pred CHHHHHHHHHhhhhCCCC--CCCHHHHHHHHHHHHHHHhhc
Q 003978 731 DPRWAAIVESCWHSDPQC--RPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 731 ~~~l~~LI~~cL~~dP~~--RPs~~ell~~L~~L~~~~~~~ 769 (782)
+.++.+||.+||..+|.+ |+++.++ +.|+||+.
T Consensus 275 s~~~~~li~~~L~~~p~r~~R~s~~el------l~h~~~~~ 309 (370)
T cd05596 275 SKQAKDLICAFLTDREVRLGRNGVDEI------KSHPFFKN 309 (370)
T ss_pred CHHHHHHHHHHccChhhccCCCCHHHH------hcCcccCC
Confidence 999999999999999988 9999999 56788764
No 74
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=4.6e-39 Score=347.30 Aligned_cols=255 Identities=30% Similarity=0.504 Sum_probs=210.4
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc------------------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCce
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY------------------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNV 564 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~------------------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnI 564 (782)
...+|++.++||+|+||.||+|.+. +..||+|++.... .......+.+|+.+|..++||||
T Consensus 3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~ni 81 (304)
T cd05096 3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-NKNARNDFLKEVKILSRLKDPNI 81 (304)
T ss_pred chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCe
Confidence 3468999999999999999999752 2259999987543 34456778899999999999999
Q ss_pred eEEeeeeecCCceeEEEeecCCCCHHHHHhhcC------------------CcchHHHHHHHHHHHHHHHHhhhcCCCCe
Q 003978 565 LLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNT------------------TKLDWRRRILMALDIARGVSYLHHCNPPI 626 (782)
Q Consensus 565 v~l~~~~~~~~~~~lv~E~~~ggsL~~~l~~~~------------------~~l~~~~~~~i~~qll~aL~~LH~~~~~i 626 (782)
+++++++...+..|+||||+.+++|.+++.... ..+++..++.++.||+.||.|||+++ |
T Consensus 82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i 159 (304)
T cd05096 82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN--F 159 (304)
T ss_pred eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC--c
Confidence 999999999999999999999999999985431 23677888999999999999999998 9
Q ss_pred eecCCCCCcEEEcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc--CC
Q 003978 627 IHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT--EK 702 (782)
Q Consensus 627 vHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt--G~ 702 (782)
+||||||+|||++.++.+||+|||+++...... .......++..|+|||++.+..++.++|||||||++|+|++ +.
T Consensus 160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~ 239 (304)
T cd05096 160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKE 239 (304)
T ss_pred cccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCC
Confidence 999999999999999999999999987543321 11223356789999999998889999999999999999986 67
Q ss_pred CCCCCCChHHHHHHhhcc------ccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003978 703 IPWDNLNSMQVIGAVGFM------NQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLR 760 (782)
Q Consensus 703 ~Pf~~~~~~~~~~~i~~~------~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~ 760 (782)
.||......+....+... ......++.++..+.+||.+||..||++|||+.++.+.|+
T Consensus 240 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 240 QPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 899887766655443211 1122345678899999999999999999999999987765
No 75
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=5.3e-40 Score=365.88 Aligned_cols=255 Identities=21% Similarity=0.303 Sum_probs=212.5
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
.+|+++++||+|+||.||++.. .++.||||++.+... .......+.+|+.+|+.++||||+++++.+..++.+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 3699999999999999999987 467899999875432 2234567888999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc---
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET--- 658 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~--- 658 (782)
|||++++|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+||||+.++.+||+|||++......
T Consensus 81 E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~ 157 (376)
T cd05598 81 DYIPGGDMMSLLIRL-GIFEEDLARFYIAELTCAIESVHKMG--FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (376)
T ss_pred eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHEEECCCCCEEEEeCCCCccccccccc
Confidence 999999999999764 36888999999999999999999999 999999999999999999999999997422100
Q ss_pred ----------------------------------------cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHH
Q 003978 659 ----------------------------------------YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWEL 698 (782)
Q Consensus 659 ----------------------------------------~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~el 698 (782)
.......+||+.|||||++.+..++.++|||||||++|+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel 237 (376)
T cd05598 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 237 (376)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence 0001134799999999999999999999999999999999
Q ss_pred HcCCCCCCCCChHHHHHHhhccccccCCC--CCCCHHHHHHHHHhhhhCCCCCC---CHHHHHHHHHHHHHHHhhc
Q 003978 699 ATEKIPWDNLNSMQVIGAVGFMNQRLEIP--KDVDPRWAAIVESCWHSDPQCRP---SFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 699 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~p--~~~~~~l~~LI~~cL~~dP~~RP---s~~ell~~L~~L~~~~~~~ 769 (782)
++|+.||...........+........++ ..+++++.+||.+|+ .+|.+|+ ++.++ +.|+||+.
T Consensus 238 l~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~el------l~h~~~~~ 306 (376)
T cd05598 238 LVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEI------KAHPFFKG 306 (376)
T ss_pred hhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHH------hCCCCcCC
Confidence 99999999887766555543322233333 368999999999977 5999999 89999 56788865
No 76
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.4e-39 Score=348.26 Aligned_cols=253 Identities=26% Similarity=0.360 Sum_probs=204.2
Q ss_pred cceeEeeeeccCCcEEEEEEEE---cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC---CCCceeEEeeeee-----c
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW---YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL---RHPNVLLFMGAVT-----S 573 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~---~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l---~HpnIv~l~~~~~-----~ 573 (782)
++|++.+.||+|+||.||+|.+ .+..||||+++...........+.+|+.+++.+ +||||+++++++. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 3799999999999999999987 256799999876544333334555677777665 6999999999875 3
Q ss_pred CCceeEEEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCC
Q 003978 574 PQRLCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLS 652 (782)
Q Consensus 574 ~~~~~lv~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla 652 (782)
...+++||||+. ++|.+++... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--iiH~dlkp~Nil~~~~~~~kl~Dfg~~ 157 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLA 157 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEEcCCCCEEEccccce
Confidence 456899999995 5999998653 345889999999999999999999998 999999999999999999999999999
Q ss_pred cccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc---------
Q 003978 653 RLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR--------- 723 (782)
Q Consensus 653 ~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~--------- 723 (782)
...... .......||+.|+|||++.+..++.++|||||||++|+|++|.+||........+..+......
T Consensus 158 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~ 236 (290)
T cd07862 158 RIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 236 (290)
T ss_pred EeccCC-cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhh
Confidence 765433 2233456899999999999988999999999999999999999999988766655444211100
Q ss_pred ----------------cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 724 ----------------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 724 ----------------~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
..+.+.++..+++||.+||+.||++|||+.++ |.|+||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~------l~hp~f 290 (290)
T cd07862 237 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA------LSHPYF 290 (290)
T ss_pred hcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHH------hcCCCC
Confidence 01123577889999999999999999999999 456765
No 77
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=9.9e-40 Score=364.59 Aligned_cols=254 Identities=22% Similarity=0.337 Sum_probs=212.5
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
.|+++++||+|+||.||+|.. .++.||||++.+... .......+.+|+.+++.++|||||++++.+..++.+|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 589999999999999999987 466799999876433 33456778899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc----
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET---- 658 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~---- 658 (782)
||++|+|.+++.+. ..+++..+..++.||+.||+|||+++ |+||||||+||||+.++.+||+|||++......
T Consensus 82 ~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~al~~lH~~~--ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~ 158 (382)
T cd05625 82 YIPGGDMMSLLIRM-GIFPEDLARFYIAELTCAVESVHKMG--FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (382)
T ss_pred CCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEEeECCCCcccccccccc
Confidence 99999999999764 46889999999999999999999998 999999999999999999999999997422100
Q ss_pred -------------------------------------------cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHH
Q 003978 659 -------------------------------------------YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVIL 695 (782)
Q Consensus 659 -------------------------------------------~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll 695 (782)
.......+||+.|+|||++.+..++.++|||||||+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil 238 (382)
T cd05625 159 YYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 238 (382)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHH
Confidence 0001234699999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCChHHHHHHhhccccccCCC--CCCCHHHHHHHHHhhhhCCCCCCC---HHHHHHHHHHHHHHHhhc
Q 003978 696 WELATEKIPWDNLNSMQVIGAVGFMNQRLEIP--KDVDPRWAAIVESCWHSDPQCRPS---FQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 696 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p--~~~~~~l~~LI~~cL~~dP~~RPs---~~ell~~L~~L~~~~~~~ 769 (782)
|||++|..||...+.......+........+| ..+++++.+||.+|+ .+|.+|++ +.++ +.|+||+.
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei------~~hp~f~~ 310 (382)
T cd05625 239 YEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEI------KAHPFFKT 310 (382)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHH------hcCCCcCC
Confidence 99999999999887766655554333333333 457999999999986 59999987 8888 56777755
No 78
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-40 Score=363.83 Aligned_cols=268 Identities=33% Similarity=0.566 Sum_probs=239.7
Q ss_pred cccccccccceeEeeeeccCCcEEEEEEEEcC-----Ce-EEEEEEec-cCCCHHHHHHHHHHHHHHHhCCCCceeEEee
Q 003978 497 CLDYEILWEDLTIGEQIGQGSCGTVYHAVWYG-----SD-VAVKVFSR-QEYSDEVIHSFRQEVSLMKRLRHPNVLLFMG 569 (782)
Q Consensus 497 ~~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~-----~~-vAiK~~~~-~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~ 569 (782)
...|++..++..+.++||+|+||.||+|..+- .. ||+|..+. .....+....+..|.++|+.++|||||+|||
T Consensus 149 r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yG 228 (474)
T KOG0194|consen 149 RQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYG 228 (474)
T ss_pred ccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 35688888999999999999999999998732 13 89999876 3356788899999999999999999999999
Q ss_pred eeecCCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEec
Q 003978 570 AVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDF 649 (782)
Q Consensus 570 ~~~~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DF 649 (782)
+......+|||||+|.||+|.++|++++..++....+.++.+.+.||+|||+++ +|||||-.+|+|++.++.+||+||
T Consensus 229 Va~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~--~IHRDIAARNcL~~~~~~vKISDF 306 (474)
T KOG0194|consen 229 VAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKN--CIHRDIAARNCLYSKKGVVKISDF 306 (474)
T ss_pred EEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCC--CcchhHhHHHheecCCCeEEeCcc
Confidence 999999999999999999999999988877999999999999999999999999 999999999999999999999999
Q ss_pred CCCccccccccccc-CCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCC
Q 003978 650 GLSRLKHETYLTTK-TGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIP 727 (782)
Q Consensus 650 Gla~~~~~~~~~~~-~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p 727 (782)
|+++... .+.... ...-...|+|||.+....++.++||||+||++||+++ |..||.+....++...+.....+..+|
T Consensus 307 GLs~~~~-~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~ 385 (474)
T KOG0194|consen 307 GLSRAGS-QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIP 385 (474)
T ss_pred ccccCCc-ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCC
Confidence 9997654 222222 2235679999999999999999999999999999999 888999999999998887778888999
Q ss_pred CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 728 KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 728 ~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
...|.++..++.+||..||+.||++.++.+.|+.+....-
T Consensus 386 ~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 386 SKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred CCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999998866543
No 79
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.1e-39 Score=354.92 Aligned_cols=249 Identities=25% Similarity=0.402 Sum_probs=208.9
Q ss_pred eeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCceeEEEeecCC
Q 003978 511 EQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIVTEFLPR 586 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lv~E~~~g 586 (782)
++||+|+||.||+|.+ .+..||||+++.... .......+..|..++..+ +||||+++++++...+.+|+|||||.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4699999999999998 466799999976532 122345566788888754 899999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003978 587 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 666 (782)
Q Consensus 587 gsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 666 (782)
++|..++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.............
T Consensus 81 g~L~~~i~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05620 81 GDLMFHIQDK-GRFDLYRATFYAAEIVCGLQFLHSKG--IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFC 157 (316)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccC
Confidence 9999998764 46889999999999999999999998 99999999999999999999999999864322222333557
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCC
Q 003978 667 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDP 746 (782)
Q Consensus 667 Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP 746 (782)
||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. ...+.++..++.++++||.+||..||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dP 235 (316)
T cd05620 158 GTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIR--VDTPHYPRWITKESKDILEKLFERDP 235 (316)
T ss_pred CCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH--hCCCCCCCCCCHHHHHHHHHHccCCH
Confidence 9999999999999999999999999999999999999998887766665553 23456677899999999999999999
Q ss_pred CCCCCHH-HHHHHHHHHHHHHhhcc
Q 003978 747 QCRPSFQ-ELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 747 ~~RPs~~-ell~~L~~L~~~~~~~~ 770 (782)
++||++. ++ +.|+||+..
T Consensus 236 ~~R~~~~~~~------~~h~~f~~~ 254 (316)
T cd05620 236 TRRLGVVGNI------RGHPFFKTI 254 (316)
T ss_pred HHcCCChHHH------HcCCCcCCC
Confidence 9999974 55 346777554
No 80
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.4e-39 Score=354.37 Aligned_cols=249 Identities=27% Similarity=0.437 Sum_probs=212.3
Q ss_pred eeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCceeEEEeecCC
Q 003978 511 EQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIVTEFLPR 586 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lv~E~~~g 586 (782)
+.||+|+||.||+|.+. +..||||++++... .......+..|+.++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999884 56799999986543 233456677899999888 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003978 587 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 666 (782)
Q Consensus 587 gsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 666 (782)
++|..++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++............+
T Consensus 81 ~~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (318)
T cd05570 81 GDLMFHIQRS-GRFDEPRARFYAAEIVLGLQFLHERG--IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFC 157 (318)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eEccCCCHHHeEECCCCcEEecccCCCeecCcCCCccccee
Confidence 9999998764 36899999999999999999999998 99999999999999999999999999865333323333457
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCC
Q 003978 667 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDP 746 (782)
Q Consensus 667 Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP 746 (782)
|++.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....++..++.++.+||.+||..||
T Consensus 158 g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~li~~~l~~dP 235 (318)
T cd05570 158 GTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSIL--EDEVRYPRWLSKEAKSILKSFLTKNP 235 (318)
T ss_pred cCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHH--cCCCCCCCcCCHHHHHHHHHHccCCH
Confidence 8999999999999999999999999999999999999998887766665553 33456677899999999999999999
Q ss_pred CCCCCH-----HHHHHHHHHHHHHHhhcc
Q 003978 747 QCRPSF-----QELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 747 ~~RPs~-----~ell~~L~~L~~~~~~~~ 770 (782)
.+||++ .++ +.|+||+..
T Consensus 236 ~~R~s~~~~~~~~l------l~~~~~~~~ 258 (318)
T cd05570 236 EKRLGCLPTGEQDI------KGHPFFREI 258 (318)
T ss_pred HHcCCCCCCCHHHH------hcCCCcCCC
Confidence 999999 777 566777553
No 81
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=3e-39 Score=359.97 Aligned_cols=261 Identities=28% Similarity=0.472 Sum_probs=214.2
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEc-------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeee
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWY-------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGA 570 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~-------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~ 570 (782)
.++...++|+++++||+|+||.||+|.+. +..||||+++.... ....+.+.+|+.+|..+ +|||||+++++
T Consensus 29 ~~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~Ei~il~~l~~HpnIv~l~~~ 107 (375)
T cd05104 29 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHINIVNLLGA 107 (375)
T ss_pred ccccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC-cHHHHHHHHHHHHHHHhcCCcceeeeeee
Confidence 34455668999999999999999999742 34699999875433 23346788899999999 89999999999
Q ss_pred eecCCceeEEEeecCCCCHHHHHhhcC-----------------------------------------------------
Q 003978 571 VTSPQRLCIVTEFLPRGSLFRLLQRNT----------------------------------------------------- 597 (782)
Q Consensus 571 ~~~~~~~~lv~E~~~ggsL~~~l~~~~----------------------------------------------------- 597 (782)
+......++|||||++|+|.+++....
T Consensus 108 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
T cd05104 108 CTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRR 187 (375)
T ss_pred eccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccc
Confidence 999999999999999999999986422
Q ss_pred ---------------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 598 ---------------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 598 ---------------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 265 (375)
T cd05104 188 SVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN--CIHRDLAARNILLTHGRITKICDFGLARDIR 265 (375)
T ss_pred ccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCchhhEEEECCCcEEEecCccceecc
Confidence 14678888999999999999999998 9999999999999999999999999987554
Q ss_pred cccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHH
Q 003978 657 ETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPR 733 (782)
Q Consensus 657 ~~~~--~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~ 733 (782)
.... ......++..|+|||++.+..++.++|||||||++|+|++ |..||.....................+...+.+
T Consensus 266 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (375)
T cd05104 266 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSE 345 (375)
T ss_pred CcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHH
Confidence 3221 1112345678999999999999999999999999999998 899998765444333332233344556678899
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 734 WAAIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 734 l~~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
+++||.+||..||++||++.++++.|++.
T Consensus 346 l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 346 MYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred HHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 99999999999999999999999988753
No 82
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.5e-39 Score=355.82 Aligned_cols=253 Identities=22% Similarity=0.376 Sum_probs=210.0
Q ss_pred ceeEeeeeccCCcEEEEEEEE-----cCCeEEEEEEeccCC--CHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCce
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW-----YGSDVAVKVFSRQEY--SDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~-----~~~~vAiK~~~~~~~--~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 577 (782)
+|+++++||+|+||.||++.. .+..||+|++.+... .......+..|+.+++.+ +||||+++++++..++.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 589999999999999999975 467799999976432 223446678899999999 599999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|+|||||.+++|.+++... ..+++..+..++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++....
T Consensus 81 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~ 157 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR-DNFSEDEVRFYSGEIILALEHLHKLG--IVYRDIKLENILLDSEGHVVLTDFGLSKEFLS 157 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCHHHeEECCCCCEEEeeCcCCccccc
Confidence 9999999999999999764 45899999999999999999999998 99999999999999999999999999875432
Q ss_pred c-cccccCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCCh----HHHHHHhhccccccCCCCCCC
Q 003978 658 T-YLTTKTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDNLNS----MQVIGAVGFMNQRLEIPKDVD 731 (782)
Q Consensus 658 ~-~~~~~~~~Gt~~y~aPE~l~~~~-~s~~sDIwSLG~ll~elltG~~Pf~~~~~----~~~~~~i~~~~~~~~~p~~~~ 731 (782)
. ........||+.|+|||++.+.. ++.++|||||||++|+|++|..||..... ......+ ......++..++
T Consensus 158 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 235 (332)
T cd05614 158 EEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRI--LKCDPPFPSFIG 235 (332)
T ss_pred cCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHH--hcCCCCCCCCCC
Confidence 2 12223457999999999998754 78899999999999999999999964322 1222222 234456777899
Q ss_pred HHHHHHHHHhhhhCCCCCC-----CHHHHHHHHHHHHHHHhhc
Q 003978 732 PRWAAIVESCWHSDPQCRP-----SFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 732 ~~l~~LI~~cL~~dP~~RP-----s~~ell~~L~~L~~~~~~~ 769 (782)
+.+.+||.+||..||++|| +++++ +.|+||+.
T Consensus 236 ~~~~~li~~~l~~dp~~R~~~~~~~~~~~------l~h~~~~~ 272 (332)
T cd05614 236 PEAQDLLHKLLRKDPKKRLGAGPQGASEI------KEHPFFKG 272 (332)
T ss_pred HHHHHHHHHHcCCCHHHcCCCCCCCHHHH------HcCCCcCC
Confidence 9999999999999999999 78888 56778764
No 83
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=8.2e-39 Score=350.73 Aligned_cols=259 Identities=23% Similarity=0.395 Sum_probs=213.9
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
+..++|++.++||+|+||.||++.+. +..+|+|++.... .......+.+|+++++.++||||+++++++..++.+|+
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI 80 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEE
Confidence 34578999999999999999999984 5678999886543 34456778899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcC-CCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC-NPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~-~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
||||+.+++|.+++.... .+++..+..++.|++.||.|||+. + |+|+||||+|||++.++.+||+|||++......
T Consensus 81 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~~--ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 81 CMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred EEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhcCC--EEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 999999999999997643 588999999999999999999974 6 999999999999999999999999998754332
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhh--------------------
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVG-------------------- 718 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~-------------------- 718 (782)
......|++.|+|||++.+..++.++|||||||++|+|++|+.||...........+.
T Consensus 158 --~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (333)
T cd06650 158 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPG 235 (333)
T ss_pred --ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCcc
Confidence 1224468999999999999889999999999999999999999997654433221110
Q ss_pred -----------------------ccccccCCC-CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 719 -----------------------FMNQRLEIP-KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 719 -----------------------~~~~~~~~p-~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
.....+.++ ..++.++++||.+||..||++|||+.++ +.|+||+....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~el------l~h~~~~~~~~ 307 (333)
T cd06650 236 RPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQL------MVHAFIKRSEA 307 (333)
T ss_pred chhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHH------hhCHHHhcCcc
Confidence 000011111 1367899999999999999999999999 67899987654
No 84
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=4.6e-39 Score=342.85 Aligned_cols=255 Identities=34% Similarity=0.607 Sum_probs=217.3
Q ss_pred cccceeEeeeeccCCcEEEEEEEEcC-------CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-------SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~~-------~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
..++|++.+.||+|+||.||+|...+ ..|++|.+.... .......+.+|+.++..++||||+++++++....
T Consensus 3 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~ 81 (283)
T cd05048 3 PLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA-EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ 81 (283)
T ss_pred ChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC-CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC
Confidence 35689999999999999999998743 348999886443 3455667899999999999999999999999989
Q ss_pred ceeEEEeecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK 640 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~---------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~ 640 (782)
..|++|||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+|+||||+||++++
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~--i~H~dlkp~Nil~~~ 159 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH--FVHRDLAARNCLVGE 159 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccccceEEEcC
Confidence 9999999999999999996532 35788899999999999999999998 999999999999999
Q ss_pred CCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHh
Q 003978 641 HWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAV 717 (782)
Q Consensus 641 ~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i 717 (782)
++.++|+|||++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||......+....+
T Consensus 160 ~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i 239 (283)
T cd05048 160 GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMI 239 (283)
T ss_pred CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 9999999999987543321 12233456889999999998889999999999999999998 99999988777766555
Q ss_pred hccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003978 718 GFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRD 761 (782)
Q Consensus 718 ~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~ 761 (782)
. .......+..+++++.+|+.+||..||.+||++.++++.|++
T Consensus 240 ~-~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 240 R-SRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred H-cCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 3 223445677899999999999999999999999999999875
No 85
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.5e-39 Score=355.94 Aligned_cols=248 Identities=26% Similarity=0.451 Sum_probs=207.8
Q ss_pred eeeccCCcEEEEEEEE--cCCeEEEEEEeccCCC-HHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCceeEEEeecCC
Q 003978 511 EQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIVTEFLPR 586 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~-~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lv~E~~~g 586 (782)
++||+|+||.||++.+ .++.||||++++.... ......+..|+.+++.+ +||||+++++++...+.+|+|||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4699999999999987 4667999999875432 34456688899999988 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003978 587 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 666 (782)
Q Consensus 587 gsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 666 (782)
++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.............
T Consensus 81 g~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (329)
T cd05588 81 GDLMFHMQRQ-RKLPEEHARFYSAEISLALNFLHERG--IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFC 157 (329)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECCCCCEEECcCccccccccCCCcccccc
Confidence 9999998654 46999999999999999999999999 99999999999999999999999999874332223334567
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh--------HH-HHHHhhccccccCCCCCCCHHHHHH
Q 003978 667 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS--------MQ-VIGAVGFMNQRLEIPKDVDPRWAAI 737 (782)
Q Consensus 667 Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~--------~~-~~~~i~~~~~~~~~p~~~~~~l~~L 737 (782)
||+.|+|||++.+..++.++|||||||++|+|++|..||..... .. ....+ ......+|..++.++.+|
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~~~~~~l 235 (329)
T cd05588 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVI--LEKQIRIPRSLSVKASSV 235 (329)
T ss_pred CCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHH--HcCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999963211 11 11122 334556788899999999
Q ss_pred HHHhhhhCCCCCCC------HHHHHHHHHHHHHHHhhc
Q 003978 738 VESCWHSDPQCRPS------FQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 738 I~~cL~~dP~~RPs------~~ell~~L~~L~~~~~~~ 769 (782)
|.+||..||.+|++ +.++ +.|+||+.
T Consensus 236 i~~~L~~dP~~R~~~~~~~~~~~i------~~hp~~~~ 267 (329)
T cd05588 236 LKGFLNKDPKERLGCHPQTGFRDI------KSHPFFRN 267 (329)
T ss_pred HHHHhccCHHHcCCCCCCCCHHHH------hcCCCCCC
Confidence 99999999999997 6677 56788854
No 86
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.9e-39 Score=360.96 Aligned_cols=260 Identities=24% Similarity=0.386 Sum_probs=217.4
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
....++|++.+.||+|+||.||++.+. ++.||+|++.+... .......+.+|+.+++.++||||+++++++..+..+
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL 118 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence 344578999999999999999999984 66799999975432 223345678899999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|+|||||++|+|.+++... .+++..+..++.||+.||+|||+++ |+||||||+||||+.++.+||+|||++.....
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~~--IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~ 194 (370)
T cd05621 119 YMVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSMG--LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE 194 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEECCCCCEEEEecccceeccc
Confidence 9999999999999999754 4788899999999999999999998 99999999999999999999999999976543
Q ss_pred cc-ccccCCCCCCcccCcccccCCC----CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCC--CC
Q 003978 658 TY-LTTKTGKGTPQWMAPEVLRNEP----SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPK--DV 730 (782)
Q Consensus 658 ~~-~~~~~~~Gt~~y~aPE~l~~~~----~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~--~~ 730 (782)
.. ......+||+.|+|||++.+.. ++.++|||||||++|+|++|..||...+.......+........+|. .+
T Consensus 195 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~ 274 (370)
T cd05621 195 TGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEI 274 (370)
T ss_pred CCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccC
Confidence 22 2233567999999999997643 67899999999999999999999998887766666644333444554 46
Q ss_pred CHHHHHHHHHhhhhCCCC--CCCHHHHHHHHHHHHHHHhhcc
Q 003978 731 DPRWAAIVESCWHSDPQC--RPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 731 ~~~l~~LI~~cL~~dP~~--RPs~~ell~~L~~L~~~~~~~~ 770 (782)
+..+++||..||..++.+ |+++.++ ++|+||+..
T Consensus 275 s~~~~~li~~~L~~~~~r~~R~~~~e~------l~hp~~~~~ 310 (370)
T cd05621 275 SKHAKNLICAFLTDREVRLGRNGVEEI------KQHPFFKND 310 (370)
T ss_pred CHHHHHHHHHHccCchhccCCCCHHHH------hcCcccCCC
Confidence 899999999999855543 8899999 668999763
No 87
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-42 Score=344.92 Aligned_cols=256 Identities=26% Similarity=0.457 Sum_probs=227.3
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
+-|.++.+||+|+||.||++.+ .|..+|||.+.... -++++..|+.+|++++.|+||++||.|.....+|||||
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s----DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVME 108 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT----DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVME 108 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc----hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehh
Confidence 3577889999999999999987 57779999876432 35778889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
||.-|++.++++....++.+..+..+++..++||+|||... -||||||..|||++.+|..||+|||.|....+.....
T Consensus 109 YCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~--KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKR 186 (502)
T KOG0574|consen 109 YCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLK--KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKR 186 (502)
T ss_pred hcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHH--HHHhhcccccEEEcccchhhhhhccccchhhhhHHhh
Confidence 99999999999888889999999999999999999999977 7999999999999999999999999999888888888
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-ccCCCCCCCHHHHHHHHHh
Q 003978 663 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-RLEIPKDVDPRWAAIVESC 741 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~-~~~~p~~~~~~l~~LI~~c 741 (782)
.+..|||.|||||++....|+.++||||||++..||..|++||....+...+..+..... .+..|..++.++.+||++|
T Consensus 187 NTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~C 266 (502)
T KOG0574|consen 187 NTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSC 266 (502)
T ss_pred CccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHH
Confidence 888999999999999999999999999999999999999999999888776655533222 3445667899999999999
Q ss_pred hhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 742 WHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 742 L~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
|.++|++|.|+.+| ++|.|.+.+..
T Consensus 267 LiK~PE~R~TA~~L------~~H~FiknA~g 291 (502)
T KOG0574|consen 267 LIKKPEERKTALRL------CEHTFIKNAPG 291 (502)
T ss_pred hcCCHHHHHHHHHH------hhhhhhcCCCc
Confidence 99999999999999 56777765543
No 88
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2.2e-39 Score=352.59 Aligned_cols=248 Identities=25% Similarity=0.419 Sum_probs=207.9
Q ss_pred eeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCceeEEEeecCC
Q 003978 511 EQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIVTEFLPR 586 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lv~E~~~g 586 (782)
+.||+|+||.||+|.+. ++.||||+++.... .......+..|..++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999974 56799999986532 122344566678888764 899999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003978 587 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 666 (782)
Q Consensus 587 gsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 666 (782)
++|.+++... ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..............
T Consensus 81 g~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~LH~~~--ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05619 81 GDLMFHIQSC-HKFDLPRATFYAAEIICGLQFLHSKG--IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFC 157 (316)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeec
Confidence 9999999764 46888999999999999999999998 99999999999999999999999999875332222333457
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCC
Q 003978 667 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDP 746 (782)
Q Consensus 667 Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP 746 (782)
||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+.. ..+.++..++.++++||.+||..||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~li~~~l~~~P 235 (316)
T cd05619 158 GTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRM--DNPCYPRWLTREAKDILVKLFVREP 235 (316)
T ss_pred CCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--CCCCCCccCCHHHHHHHHHHhccCH
Confidence 89999999999999999999999999999999999999998877766655532 2345667799999999999999999
Q ss_pred CCCCCHH-HHHHHHHHHHHHHhhc
Q 003978 747 QCRPSFQ-ELVDKLRDLQRQYFQA 769 (782)
Q Consensus 747 ~~RPs~~-ell~~L~~L~~~~~~~ 769 (782)
++||++. ++ ++|+||+.
T Consensus 236 ~~R~~~~~~l------~~h~~~~~ 253 (316)
T cd05619 236 ERRLGVKGDI------RQHPFFRE 253 (316)
T ss_pred hhcCCChHHH------HcCcccCC
Confidence 9999996 66 45677654
No 89
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.5e-39 Score=354.83 Aligned_cols=252 Identities=29% Similarity=0.434 Sum_probs=208.0
Q ss_pred eeeccCCcEEEEEEEE--cCCeEEEEEEeccCCC-HHHHHHHHHHHH-HHHhCCCCceeEEeeeeecCCceeEEEeecCC
Q 003978 511 EQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYS-DEVIHSFRQEVS-LMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPR 586 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~-~~~~~~~~~Ei~-il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~g 586 (782)
+.||+|+||.||++.+ .++.||||++.+.... ......+..|.. +++.++||||+++++++...+.+|+||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 4699999999999998 5778999999765332 222344445544 56789999999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003978 587 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 666 (782)
Q Consensus 587 gsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 666 (782)
++|..++... ..+++..+..++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++..............
T Consensus 81 g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~g--ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (323)
T cd05575 81 GELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSLN--IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFC 157 (323)
T ss_pred CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcccccc
Confidence 9999999764 46889999999999999999999998 99999999999999999999999999875433333334557
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCC
Q 003978 667 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDP 746 (782)
Q Consensus 667 Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP 746 (782)
||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+. .....+++.+++.+.+||.+||..||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~li~~~l~~~p 235 (323)
T cd05575 158 GTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNIL--NKPLRLKPNISVSARHLLEGLLQKDR 235 (323)
T ss_pred CChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHHHHHHHHHhhcCH
Confidence 9999999999999999999999999999999999999999887766655553 33455677889999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhc
Q 003978 747 QCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 747 ~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
.+||++.+.+..+ +.|+||..
T Consensus 236 ~~R~~~~~~~~~i--l~~~~~~~ 256 (323)
T cd05575 236 TKRLGAKDDFLEI--KNHVFFSS 256 (323)
T ss_pred HhCCCCCCCHHHH--HcCCCcCC
Confidence 9999875322221 45677743
No 90
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.2e-39 Score=341.74 Aligned_cols=261 Identities=27% Similarity=0.360 Sum_probs=218.2
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCc-eeEEeeeeecCC-----
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPN-VLLFMGAVTSPQ----- 575 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~Hpn-Iv~l~~~~~~~~----- 575 (782)
...|..+++||+|+||+||+|+. .|+.||+|.+......+.......+|+.+|+.++|+| ||.+++++...+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 45677888999999999999987 5778999999766543334466788999999999999 999999998777
Q ss_pred -ceeEEEeecCCCCHHHHHhhcC---CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCC
Q 003978 576 -RLCIVTEFLPRGSLFRLLQRNT---TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGL 651 (782)
Q Consensus 576 -~~~lv~E~~~ggsL~~~l~~~~---~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGl 651 (782)
.+++||||+ ..+|..++.... ..++...+..++.||+.||+|||+++ |+||||||+||||+++|.+||+|||+
T Consensus 90 ~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~--IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 90 GKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG--ILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred ceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC--eecccCCcceEEECCCCcEeeeccch
Confidence 799999999 459999998765 35788899999999999999999999 99999999999999999999999999
Q ss_pred CcccccccccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc------
Q 003978 652 SRLKHETYLTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL------ 724 (782)
Q Consensus 652 a~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~------ 724 (782)
|+....+.......++|..|+|||++.|. .|+...||||+||+++||++++.-|.+......+..|-.....+
T Consensus 167 Ara~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp 246 (323)
T KOG0594|consen 167 ARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWP 246 (323)
T ss_pred HHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCC
Confidence 99766555555567889999999999987 68899999999999999999999999988876665542211111
Q ss_pred ----------CCC------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 725 ----------EIP------------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 725 ----------~~p------------~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
.++ +..+++..+++.+||+.+|.+|.|+... |.|+||+.....
T Consensus 247 ~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~a------l~h~yf~~~~~~ 311 (323)
T KOG0594|consen 247 GVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGA------LTHPYFSELPEK 311 (323)
T ss_pred CccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHH------hcChhhcccccc
Confidence 111 1233578999999999999999999998 778999776443
No 91
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.4e-38 Score=366.48 Aligned_cols=254 Identities=28% Similarity=0.402 Sum_probs=217.0
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC----
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ---- 575 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~---- 575 (782)
...++|.+.+.||+|+||.||++.. .++.||||++............+.+|+.++..++|+||++++..+....
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 3457999999999999999999986 5788999999877766666778889999999999999999988765332
Q ss_pred ----ceeEEEeecCCCCHHHHHhhc---CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEe
Q 003978 576 ----RLCIVTEFLPRGSLFRLLQRN---TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGD 648 (782)
Q Consensus 576 ----~~~lv~E~~~ggsL~~~l~~~---~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~D 648 (782)
.+++||||+++|+|.+++... ...+++..++.++.|++.||.|||+++ |+||||||+||||+.++.+||+|
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~--IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH--MIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEeCCCCEEEEe
Confidence 368999999999999998642 346889999999999999999999998 99999999999999999999999
Q ss_pred cCCCcccccc--cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCC
Q 003978 649 FGLSRLKHET--YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEI 726 (782)
Q Consensus 649 FGla~~~~~~--~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~ 726 (782)
||+++..... ........||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+.. .....+
T Consensus 187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~-~~~~~~ 265 (496)
T PTZ00283 187 FGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLA-GRYDPL 265 (496)
T ss_pred cccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc-CCCCCC
Confidence 9998764332 1122345799999999999999999999999999999999999999998777666555432 223456
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003978 727 PKDVDPRWAAIVESCWHSDPQCRPSFQELVDK 758 (782)
Q Consensus 727 p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~ 758 (782)
+..+++++.+||.+||..||.+||++.+++++
T Consensus 266 ~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 266 PPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 78899999999999999999999999999654
No 92
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=3.7e-39 Score=351.91 Aligned_cols=254 Identities=24% Similarity=0.416 Sum_probs=214.8
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCceeEEE
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lv~ 581 (782)
+|++.+.||+|+||.||+|.. .++.||||++++... .......+..|+.++..+. |++|+++++++...+.+|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 478889999999999999987 467899999976533 2334566778899998886 577888999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++........
T Consensus 81 Ey~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~~--ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~ 157 (323)
T cd05615 81 EYVNGGDLMYHIQQV-GKFKEPQAVFYAAEISVGLFFLHRRG--IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVT 157 (323)
T ss_pred cCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCCCCEEEeccccccccCCCCcc
Confidence 999999999999764 36899999999999999999999998 999999999999999999999999998754333333
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHh
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 741 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~c 741 (782)
.....||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....+|..++.++.+|+.+|
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~--~~~~~~p~~~~~~~~~li~~~ 235 (323)
T cd05615 158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIM--EHNVSYPKSLSKEAVSICKGL 235 (323)
T ss_pred ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH--hCCCCCCccCCHHHHHHHHHH
Confidence 345579999999999999999999999999999999999999999888776666553 344567788999999999999
Q ss_pred hhhCCCCCCCH-----HHHHHHHHHHHHHHhhcc
Q 003978 742 WHSDPQCRPSF-----QELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 742 L~~dP~~RPs~-----~ell~~L~~L~~~~~~~~ 770 (782)
|.++|.+|++. .++ +.|+||+..
T Consensus 236 l~~~p~~R~~~~~~~~~~i------~~h~~f~~~ 263 (323)
T cd05615 236 MTKHPSKRLGCGPEGERDI------REHAFFRRI 263 (323)
T ss_pred cccCHhhCCCCCCCCHHHH------hcCcccCCC
Confidence 99999999974 444 466777653
No 93
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.6e-39 Score=359.99 Aligned_cols=256 Identities=23% Similarity=0.379 Sum_probs=214.8
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
++|++++.||+|+||.||++.. .++.||||+++.... ..+....+..|+.++..++||||+++++.+...+.+|+||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 4689999999999999999987 467899999975432 3345667888999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc--
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY-- 659 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~-- 659 (782)
|||+|++|.+++... ..+++..+..++.|++.||.|||++| |+||||||+||||+.++.+||+|||++.......
T Consensus 81 E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~~L~~lH~~g--ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~ 157 (360)
T cd05627 81 EFLPGGDMMTLLMKK-DTLSEEATQFYIAETVLAIDAIHQLG--FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRT 157 (360)
T ss_pred eCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEccCCCHHHEEECCCCCEEEeeccCCccccccccc
Confidence 999999999999764 46899999999999999999999999 9999999999999999999999999986432110
Q ss_pred ---------------------------------ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCC
Q 003978 660 ---------------------------------LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWD 706 (782)
Q Consensus 660 ---------------------------------~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~ 706 (782)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~ 237 (360)
T cd05627 158 EFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (360)
T ss_pred ccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCC
Confidence 00123479999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHhhccccccCCCC--CCCHHHHHHHHHhhhhCCCCCCC---HHHHHHHHHHHHHHHhhcc
Q 003978 707 NLNSMQVIGAVGFMNQRLEIPK--DVDPRWAAIVESCWHSDPQCRPS---FQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 707 ~~~~~~~~~~i~~~~~~~~~p~--~~~~~l~~LI~~cL~~dP~~RPs---~~ell~~L~~L~~~~~~~~ 770 (782)
..+.......+........+|+ .++.++++||.+|+. ||.+|++ +.++ +.|+||+..
T Consensus 238 ~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei------~~hp~f~~~ 299 (360)
T cd05627 238 SETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEI------KSHPFFEGV 299 (360)
T ss_pred CCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHH------hcCCCCCCC
Confidence 8887776666543333334443 378999999999874 9999984 6777 678998653
No 94
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=6.1e-39 Score=342.58 Aligned_cols=251 Identities=24% Similarity=0.362 Sum_probs=207.7
Q ss_pred eccCCcEEEEEEEE--cCCeEEEEEEeccCCCH-HHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCCCCH
Q 003978 513 IGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSL 589 (782)
Q Consensus 513 IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ggsL 589 (782)
||+|+||+||++.+ .++.||+|++....... .....+..|+.+++.++||||+++++++..+..+|+|||||++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 79999999999987 46789999987654322 3345677899999999999999999999999999999999999999
Q ss_pred HHHHhh---cCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003978 590 FRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 666 (782)
Q Consensus 590 ~~~l~~---~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 666 (782)
..++.. ....+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||++..............
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 158 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR--IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYA 158 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccC
Confidence 888743 2346899999999999999999999998 99999999999999999999999999876544333334457
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHh--hccccccCCCCCCCHHHHHHHHHhhhh
Q 003978 667 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAV--GFMNQRLEIPKDVDPRWAAIVESCWHS 744 (782)
Q Consensus 667 Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i--~~~~~~~~~p~~~~~~l~~LI~~cL~~ 744 (782)
||+.|+|||++.+..++.++|||||||++|+|++|+.||...........+ ........++..++..+.+|+.+||..
T Consensus 159 g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 238 (280)
T cd05608 159 GTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAK 238 (280)
T ss_pred CCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHhcC
Confidence 899999999999999999999999999999999999999765432111111 112234456677899999999999999
Q ss_pred CCCCCC-----CHHHHHHHHHHHHHHHhhccc
Q 003978 745 DPQCRP-----SFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 745 dP~~RP-----s~~ell~~L~~L~~~~~~~~~ 771 (782)
||++|| +++++ +.|+||+...
T Consensus 239 ~P~~R~~~~~~~~~~~------l~h~~~~~~~ 264 (280)
T cd05608 239 DPEKRLGFRDGNCDGL------RTHPLFRDLN 264 (280)
T ss_pred CHHHhcCCCCCCHHHH------hcChhhhcCC
Confidence 999999 67777 5689997643
No 95
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.4e-39 Score=369.47 Aligned_cols=265 Identities=32% Similarity=0.591 Sum_probs=230.5
Q ss_pred ccccccccccceeEeeeeccCCcEEEEEEEEcC-------CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEe
Q 003978 496 DCLDYEILWEDLTIGEQIGQGSCGTVYHAVWYG-------SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFM 568 (782)
Q Consensus 496 ~~~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~-------~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~ 568 (782)
+....++...+.++.+.||+|+||+||++...+ .-||||.++... .....+.|++|+++|..++|||||+|+
T Consensus 477 ~~~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a-~~~~~~dF~REaeLla~l~H~nIVrLl 555 (774)
T KOG1026|consen 477 DLKVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA-ENQARQDFRREAELLAELQHPNIVRLL 555 (774)
T ss_pred ccceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc-cHHHHHHHHHHHHHHHhccCCCeEEEE
Confidence 344557778899999999999999999998632 249999987654 345678999999999999999999999
Q ss_pred eeeecCCceeEEEeecCCCCHHHHHhhc-------------CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCc
Q 003978 569 GAVTSPQRLCIVTEFLPRGSLFRLLQRN-------------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSN 635 (782)
Q Consensus 569 ~~~~~~~~~~lv~E~~~ggsL~~~l~~~-------------~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~N 635 (782)
|++..++.+|||+|||..|+|.++|..+ +.+++..+.+.|+.||+.||.||-++. +|||||-..|
T Consensus 556 GVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~--FVHRDLATRN 633 (774)
T KOG1026|consen 556 GVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH--FVHRDLATRN 633 (774)
T ss_pred EEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc--ccccchhhhh
Confidence 9999999999999999999999999643 223788999999999999999999988 9999999999
Q ss_pred EEEcCCCcEEEEecCCCccccc-cccccc-CCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHH
Q 003978 636 LLVDKHWTVKVGDFGLSRLKHE-TYLTTK-TGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQ 712 (782)
Q Consensus 636 ILl~~~~~vkL~DFGla~~~~~-~~~~~~-~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~ 712 (782)
+||+++..|||+|||+++.... +|.... ...-..+|||||.+...+++.+|||||+||+|||+++ |+.||.++...+
T Consensus 634 CLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E 713 (774)
T KOG1026|consen 634 CLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE 713 (774)
T ss_pred ceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH
Confidence 9999999999999999985433 233222 2234679999999999999999999999999999999 999999999999
Q ss_pred HHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 713 VIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 713 ~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
+++.+....- ..-|..+|.++++|+..||+.+|.+||++.||-..|.+...
T Consensus 714 VIe~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 714 VIECIRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred HHHHHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence 9999875444 88899999999999999999999999999999888776543
No 96
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=8.3e-39 Score=346.33 Aligned_cols=260 Identities=23% Similarity=0.339 Sum_probs=212.8
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
.++|.+.++||+|+||.||++.. .+..||+|.++..... .....+.+|+.+++.++||||+++++++..++..|+||
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 83 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVF 83 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC-CcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEE
Confidence 36799999999999999999987 4667999998754322 22345678999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
||+.+ +|.+++......+++..+..++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++.........
T Consensus 84 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 160 (309)
T cd07872 84 EYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRK--VLHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 160 (309)
T ss_pred eCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEECccccceecCCCccc
Confidence 99964 899888776667889999999999999999999998 999999999999999999999999998765443333
Q ss_pred ccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-----------------c
Q 003978 662 TKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-----------------R 723 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~-----------------~ 723 (782)
.....+++.|+|||++.+ ..++.++|||||||++|+|++|..||...+.......+..... .
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
T cd07872 161 YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKN 240 (309)
T ss_pred cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhh
Confidence 334568999999999865 4578999999999999999999999987765443332211100 0
Q ss_pred c-----------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 724 L-----------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 724 ~-----------~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
. ...+.+++++++||.+||..||.+|||+.++ +.|+||+.....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~------l~h~~~~~~~~~ 295 (309)
T cd07872 241 YNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEA------MKHAYFRSLGTR 295 (309)
T ss_pred hhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHH------hcChhhhhcccc
Confidence 0 1113578899999999999999999999999 678999875543
No 97
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-39 Score=339.27 Aligned_cols=256 Identities=26% Similarity=0.345 Sum_probs=212.4
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec-----CCc
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS-----PQR 576 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-----~~~ 576 (782)
...|..++.||.|+||.|+.+.+ .+..||||.+.......-..++..+|+++|+.++|+||+.+++++.. -+.
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 35667789999999999999987 57789999987655556667888999999999999999999999865 245
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
+|+|+|+| +.+|...|+.+. .++...+..++.||++||.|+|+.+ |+||||||.|+|++.++.+||||||+|+...
T Consensus 101 vYiV~elM-etDL~~iik~~~-~L~d~H~q~f~YQiLrgLKyiHSAn--ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~ 176 (359)
T KOG0660|consen 101 VYLVFELM-ETDLHQIIKSQQ-DLTDDHAQYFLYQILRGLKYIHSAN--VIHRDLKPSNLLLNADCDLKICDFGLARYLD 176 (359)
T ss_pred eEEehhHH-hhHHHHHHHcCc-cccHHHHHHHHHHHHHhcchhhccc--ccccccchhheeeccCCCEEeccccceeecc
Confidence 89999999 679999997643 5999999999999999999999999 9999999999999999999999999999775
Q ss_pred cc--cccccCCCCCCcccCccccc-CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhc--------------
Q 003978 657 ET--YLTTKTGKGTPQWMAPEVLR-NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGF-------------- 719 (782)
Q Consensus 657 ~~--~~~~~~~~Gt~~y~aPE~l~-~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~-------------- 719 (782)
.. .......+-|..|+|||++. ...|+.+.||||+||+|.||++|++-|.+.+....+..+..
T Consensus 177 ~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~ 256 (359)
T KOG0660|consen 177 KFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIR 256 (359)
T ss_pred ccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhc
Confidence 32 11222446799999999875 46689999999999999999999999988876554433211
Q ss_pred ----------cccccC-----CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 720 ----------MNQRLE-----IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 720 ----------~~~~~~-----~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
....+. +.+..++.+.+|+.+||..||.+|+|++|. |.|+|+..
T Consensus 257 s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eA------L~hPYl~~ 315 (359)
T KOG0660|consen 257 SEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEA------LAHPYLAP 315 (359)
T ss_pred cHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHH------hcChhhhh
Confidence 111111 225788999999999999999999999999 77898854
No 98
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=3.3e-39 Score=353.21 Aligned_cols=250 Identities=27% Similarity=0.436 Sum_probs=207.0
Q ss_pred eeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCceeEEEeecCC
Q 003978 511 EQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIVTEFLPR 586 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lv~E~~~g 586 (782)
+.||+|+||.||++.. .++.||+|++++... .......+..|+.++..+ +||||+++++++...+.+|+|||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4699999999999987 456799999987543 234456678899888777 799999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003978 587 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 666 (782)
Q Consensus 587 gsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 666 (782)
++|..++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++.............
T Consensus 81 ~~L~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (329)
T cd05618 81 GDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC 157 (329)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcccccc
Confidence 9999988654 46899999999999999999999998 99999999999999999999999999875433333334567
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC--------hHHHHHHhhccccccCCCCCCCHHHHHHH
Q 003978 667 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN--------SMQVIGAVGFMNQRLEIPKDVDPRWAAIV 738 (782)
Q Consensus 667 Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~--------~~~~~~~i~~~~~~~~~p~~~~~~l~~LI 738 (782)
||+.|+|||++.+..++.++|||||||++|+|++|..||.... ........ .......+|..++..+.+||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~-i~~~~~~~p~~~~~~~~~ll 236 (329)
T cd05618 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV-ILEKQIRIPRSLSVKAASVL 236 (329)
T ss_pred CCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHH-HhcCCCCCCCCCCHHHHHHH
Confidence 9999999999999999999999999999999999999995321 11111111 13345667888999999999
Q ss_pred HHhhhhCCCCCCCH------HHHHHHHHHHHHHHhhcc
Q 003978 739 ESCWHSDPQCRPSF------QELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 739 ~~cL~~dP~~RPs~------~ell~~L~~L~~~~~~~~ 770 (782)
.+||..||.+||++ .++ +.|+||+..
T Consensus 237 ~~~L~~dP~~R~~~~~~~~~~~i------~~hp~f~~~ 268 (329)
T cd05618 237 KSFLNKDPKERLGCHPQTGFADI------QGHPFFRNV 268 (329)
T ss_pred HHHhcCCHHHcCCCCCCCCHHHH------hcCCCCCCC
Confidence 99999999999984 566 567888543
No 99
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.8e-38 Score=334.15 Aligned_cols=257 Identities=31% Similarity=0.562 Sum_probs=217.5
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEc-CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVWY-GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~~-~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
|++..++|++.++||+|+||.||++... +..||+|.+..... ..+.+.+|+.+++.++|+||+++++.+...+..+
T Consensus 1 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05072 1 WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM---SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIY 77 (261)
T ss_pred CcCchHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch---hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcE
Confidence 4566789999999999999999999874 45699998765332 2467889999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 579 IVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
++|||+.+++|.+++... ...+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~--i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05072 78 IITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN--YIHRDLRAANVLVSESLMCKIADFGLARVIED 155 (261)
T ss_pred EEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhhEEecCCCcEEECCCccceecCC
Confidence 999999999999999653 456788899999999999999999988 99999999999999999999999999976544
Q ss_pred cccc-ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHH
Q 003978 658 TYLT-TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWA 735 (782)
Q Consensus 658 ~~~~-~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~ 735 (782)
.... .....++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+... .....+..++.++.
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 234 (261)
T cd05072 156 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRG-YRMPRMENCPDELY 234 (261)
T ss_pred CceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHHH
Confidence 3221 122345678999999998889999999999999999998 99999887776666555422 23344557899999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
++|.+||..+|++||+++++++.|+++
T Consensus 235 ~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 235 DIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred HHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 999999999999999999999988763
No 100
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2.6e-38 Score=333.90 Aligned_cols=257 Identities=24% Similarity=0.406 Sum_probs=215.4
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccC-CCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQE-YSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~-~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
++|++.++||+|+||.||++.. .++.||||.++... ........+.+|+++++.++||||+++++++...+..+++|
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 5799999999999999999987 57789999886533 34455667889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 582 EFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 582 E~~~ggsL~~~l~~---~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
||+++++|.+++.. ....+++..++.++.||+.||.|||+++ |+|+||||+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~ 159 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCCHHHEEEcCCCCEEECccccceeccch
Confidence 99999999988853 2345788999999999999999999998 999999999999999999999999998765543
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh--HHHHHHhhccccccCCCCCCCHHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS--MQVIGAVGFMNQRLEIPKDVDPRWAA 736 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~--~~~~~~i~~~~~~~~~p~~~~~~l~~ 736 (782)
........|++.|+|||.+.+..++.++||||||+++|+|++|..||..... ......+.........+..++..+.+
T Consensus 160 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (267)
T cd08228 160 TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRE 239 (267)
T ss_pred hHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHH
Confidence 3333345689999999999988899999999999999999999999965432 23333332222222233467889999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003978 737 IVESCWHSDPQCRPSFQELVDKLRDLQ 763 (782)
Q Consensus 737 LI~~cL~~dP~~RPs~~ell~~L~~L~ 763 (782)
||.+||..+|++||++.++++.|+.++
T Consensus 240 li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 240 LVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 999999999999999999999998764
No 101
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=2.9e-38 Score=333.85 Aligned_cols=255 Identities=35% Similarity=0.565 Sum_probs=218.5
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc-----CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY-----GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~-----~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
.++|++.+.||+|+||.||+|.+. ...||||+++... .......+.+|+.+++.++||||+++++++...+..+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVM 81 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceE
Confidence 367999999999999999999874 2368999886543 3445567888999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc-
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE- 657 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~- 657 (782)
++|||+++++|.+++......+++..++.++.|++.||.|||+++ |+|+||||+||+++.++.++|+|||++.....
T Consensus 82 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~--i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 82 IITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMN--YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred EEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 999999999999999876667899999999999999999999988 99999999999999999999999999986642
Q ss_pred -ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHH
Q 003978 658 -TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWA 735 (782)
Q Consensus 658 -~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~ 735 (782)
.........+++.|+|||.+.+..++.++|||||||++|+|++ |..||...........+.. ......+..++..+.
T Consensus 160 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~ 238 (266)
T cd05033 160 EATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVED-GYRLPPPMDCPSALY 238 (266)
T ss_pred ccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHc-CCCCCCCCCCCHHHH
Confidence 1122223345678999999998889999999999999999998 9999988777666655532 223445667899999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
+|+.+||..+|++||++.++++.|.++
T Consensus 239 ~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 239 QLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred HHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 999999999999999999999999876
No 102
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.4e-38 Score=333.16 Aligned_cols=250 Identities=31% Similarity=0.515 Sum_probs=214.5
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCC---HHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYS---DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
+.|++.+.||+|++|.||++.. .++.|+||.+...... ......+.+|+++++.++||||+++++++..+..+++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4689999999999999999986 5788999998754332 2345678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
+|||+++++|.+++.... .+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++.......
T Consensus 82 v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~ 158 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG-ALTETVTRKYTRQILEGVEYLHSNM--IVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC 158 (263)
T ss_pred EEEECCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEeecccceeccccc
Confidence 999999999999997643 5888999999999999999999998 9999999999999999999999999987543321
Q ss_pred ccc---cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHH
Q 003978 660 LTT---KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 736 (782)
Q Consensus 660 ~~~---~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~ 736 (782)
... ....|++.|+|||++.+..++.++|||||||++|+|++|+.||...........+........++..++..+.+
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (263)
T cd06625 159 SSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARN 238 (263)
T ss_pred cccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHH
Confidence 111 23457889999999999989999999999999999999999998776665555554444556677889999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHH
Q 003978 737 IVESCWHSDPQCRPSFQELVD 757 (782)
Q Consensus 737 LI~~cL~~dP~~RPs~~ell~ 757 (782)
||.+||..+|.+||++.++++
T Consensus 239 li~~~l~~~p~~Rpt~~~ll~ 259 (263)
T cd06625 239 FLRRTFVENAKKRPSAEELLR 259 (263)
T ss_pred HHHHHhhcCcccCCCHHHHhh
Confidence 999999999999999999953
No 103
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.9e-38 Score=355.92 Aligned_cols=263 Identities=29% Similarity=0.481 Sum_probs=218.0
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEcC-------CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEee
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYG-------SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMG 569 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~-------~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~ 569 (782)
..|+...++|+++++||+|+||.||+|.+.+ ..||||+++... .....+.+.+|+++|+.+. |||||++++
T Consensus 30 ~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~ 108 (400)
T cd05105 30 SRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA-RSSEKQALMSELKIMTHLGPHLNIVNLLG 108 (400)
T ss_pred CceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhcCCCCCeeeEEE
Confidence 4567777899999999999999999998632 259999986543 3344567889999999996 999999999
Q ss_pred eeecCCceeEEEeecCCCCHHHHHhhcC----------------------------------------------------
Q 003978 570 AVTSPQRLCIVTEFLPRGSLFRLLQRNT---------------------------------------------------- 597 (782)
Q Consensus 570 ~~~~~~~~~lv~E~~~ggsL~~~l~~~~---------------------------------------------------- 597 (782)
++.....+|||||||++|+|.+++..+.
T Consensus 109 ~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (400)
T cd05105 109 ACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQY 188 (400)
T ss_pred EEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccccc
Confidence 9999999999999999999999985431
Q ss_pred -------------------------------------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 003978 598 -------------------------------------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSS 634 (782)
Q Consensus 598 -------------------------------------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~ 634 (782)
..+++..++.++.||+.||.|||+.+ |+|+||||+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivH~dikp~ 266 (400)
T cd05105 189 VPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN--CVHRDLAAR 266 (400)
T ss_pred chhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChH
Confidence 23677788899999999999999998 999999999
Q ss_pred cEEEcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChH
Q 003978 635 NLLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSM 711 (782)
Q Consensus 635 NILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~ 711 (782)
|||++.++.+||+|||+++...... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||......
T Consensus 267 Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~ 346 (400)
T cd05105 267 NVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD 346 (400)
T ss_pred hEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh
Confidence 9999999999999999987543321 12223457788999999999889999999999999999997 99999876544
Q ss_pred HHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003978 712 QVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 763 (782)
Q Consensus 712 ~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~ 763 (782)
............+..+..++.++.++|.+||..||++||++.+|.+.|.++.
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 347 STFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred HHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 3333332233345566788999999999999999999999999999988764
No 104
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.9e-38 Score=351.26 Aligned_cols=254 Identities=27% Similarity=0.368 Sum_probs=205.7
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC-----
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ----- 575 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----- 575 (782)
..++|++.+.||+|+||.||++.+ .+..||||++............+.+|+.+++.++||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 457899999999999999999987 4678999999766544555677889999999999999999999986543
Q ss_pred -ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 576 -RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 576 -~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
.+|+||||+.+ +|...+.. .+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~--ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~ 172 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLART 172 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCCCCEEEecCCCccc
Confidence 47999999955 67776642 4788889999999999999999999 99999999999999999999999999975
Q ss_pred cccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc--------------
Q 003978 655 KHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM-------------- 720 (782)
Q Consensus 655 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~-------------- 720 (782)
..... ......||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+...
T Consensus 173 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (359)
T cd07876 173 ACTNF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQP 251 (359)
T ss_pred cccCc-cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 43322 223457899999999999999999999999999999999999999876543322111000
Q ss_pred ------cccc--------------------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 721 ------NQRL--------------------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 721 ------~~~~--------------------~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
...+ ......++++++||.+||..||++|||+.++ |.|+||+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~------l~hp~~~~ 320 (359)
T cd07876 252 TVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEA------LRHPYITV 320 (359)
T ss_pred HHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHH------hcCchhhh
Confidence 0000 0112346789999999999999999999999 56788764
No 105
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=8.8e-39 Score=337.61 Aligned_cols=248 Identities=38% Similarity=0.682 Sum_probs=209.4
Q ss_pred eEeeeeccCCcEEEEEEEEc------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 508 TIGEQIGQGSCGTVYHAVWY------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 508 ~i~~~IG~G~~G~Vy~~~~~------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
++.+.||.|.||.||+|.+. +..|+||+++. ....+....+.+|+++++.++||||+++++++...+.+++||
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~-~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKP-SSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVM 80 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEEST-TSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecc-ccccccceeeeecccccccccccccccccccccccccccccc
Confidence 57789999999999999987 55699999954 334555788999999999999999999999999888899999
Q ss_pred eecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc--c
Q 003978 582 EFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE--T 658 (782)
Q Consensus 582 E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~--~ 658 (782)
|||++|+|.++|... ...+++..++.++.||+.||.|||+++ |+|+||++.||+++.++.+||+|||++..... .
T Consensus 81 e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~--iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN--IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp E--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT--EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccc
Confidence 999999999999876 567999999999999999999999998 99999999999999999999999999876522 1
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 737 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~L 737 (782)
........+...|+|||.+.+..++.++||||||+++|||++ |..||...+..+....+ ........+..++..+.++
T Consensus 159 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l 237 (259)
T PF07714_consen 159 YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKL-KQGQRLPIPDNCPKDIYSL 237 (259)
T ss_dssp EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHH-HTTEETTSBTTSBHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccceeccchhHHHHHH
Confidence 222233456789999999998889999999999999999999 78999999888777776 3445566778899999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHH
Q 003978 738 VESCWHSDPQCRPSFQELVDKL 759 (782)
Q Consensus 738 I~~cL~~dP~~RPs~~ell~~L 759 (782)
|.+||..||++||++.++++.|
T Consensus 238 i~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 238 IQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHHT-SSGGGS--HHHHHHHH
T ss_pred HHHHcCCChhhCcCHHHHHhcC
Confidence 9999999999999999998875
No 106
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.6e-38 Score=338.73 Aligned_cols=267 Identities=33% Similarity=0.533 Sum_probs=221.7
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEc-------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeee
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVWY-------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT 572 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~~-------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~ 572 (782)
|++..++|++.++||+|+||.||+|..+ +..||+|.+..... ......+.+|+.+++.++||||+++++++.
T Consensus 1 ~~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 79 (288)
T cd05061 1 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS-LRERIEFLNEASVMKGFTCHHVVRLLGVVS 79 (288)
T ss_pred CcccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence 4566789999999999999999999753 23699998764432 233456788999999999999999999999
Q ss_pred cCCceeEEEeecCCCCHHHHHhhcC---------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc
Q 003978 573 SPQRLCIVTEFLPRGSLFRLLQRNT---------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT 643 (782)
Q Consensus 573 ~~~~~~lv~E~~~ggsL~~~l~~~~---------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~ 643 (782)
.....|+||||+.+++|.+++.... ..+....++.++.||+.||.|||+++ |+||||||+||+++.++.
T Consensus 80 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dikp~nili~~~~~ 157 (288)
T cd05061 80 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFT 157 (288)
T ss_pred CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcCCCCChheEEEcCCCc
Confidence 9999999999999999999996522 23456778889999999999999998 999999999999999999
Q ss_pred EEEEecCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcc
Q 003978 644 VKVGDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFM 720 (782)
Q Consensus 644 vkL~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~ 720 (782)
++|+|||+++....... ......++..|+|||.+.+..++.++|||||||++|+|++ |..||......+....+. .
T Consensus 158 ~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~-~ 236 (288)
T cd05061 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM-D 236 (288)
T ss_pred EEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-c
Confidence 99999999875433221 1122345778999999998889999999999999999998 799998877766554442 2
Q ss_pred ccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 721 NQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 721 ~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
......+..+++.++++|.+||..||++|||+.++++.|++..+++|..+
T Consensus 237 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 237 GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence 23345566788999999999999999999999999999999999888653
No 107
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=9.1e-39 Score=355.62 Aligned_cols=260 Identities=23% Similarity=0.365 Sum_probs=214.8
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 576 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 576 (782)
.+...++|++.+.||+|+||.||++.+. ++.||+|++.+... .......+.+|+.+++.++||||+++++++..+..
T Consensus 38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (371)
T cd05622 38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 117 (371)
T ss_pred cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 3455689999999999999999999884 66799999875432 22334567889999999999999999999999999
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
+|+|||||++++|.+++... .+++..+..++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++....
T Consensus 118 ~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~ 193 (371)
T cd05622 118 LYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 193 (371)
T ss_pred EEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCC--EEeCCCCHHHEEECCCCCEEEEeCCceeEcC
Confidence 99999999999999999754 4788889999999999999999999 9999999999999999999999999997654
Q ss_pred ccc-ccccCCCCCCcccCcccccCCC----CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC--CC
Q 003978 657 ETY-LTTKTGKGTPQWMAPEVLRNEP----SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP--KD 729 (782)
Q Consensus 657 ~~~-~~~~~~~Gt~~y~aPE~l~~~~----~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p--~~ 729 (782)
... ......+||+.|||||++.+.. ++.++|||||||++|+|++|..||...+.......+........+| ..
T Consensus 194 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 273 (371)
T cd05622 194 KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDND 273 (371)
T ss_pred cCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCC
Confidence 322 2233567999999999997643 6789999999999999999999999888776666664433333334 46
Q ss_pred CCHHHHHHHHHhhhhCCCC--CCCHHHHHHHHHHHHHHHhhc
Q 003978 730 VDPRWAAIVESCWHSDPQC--RPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 730 ~~~~l~~LI~~cL~~dP~~--RPs~~ell~~L~~L~~~~~~~ 769 (782)
++..+++||.+||..++.+ |+++.++ +.|+||+.
T Consensus 274 ~s~~~~~li~~~L~~~~~r~~r~~~~ei------~~h~~~~~ 309 (371)
T cd05622 274 ISKEAKNLICAFLTDREVRLGRNGVEEI------KRHLFFKN 309 (371)
T ss_pred CCHHHHHHHHHHcCChhhhcCCCCHHHH------hcCcccCC
Confidence 8999999999999844433 7899999 45677754
No 108
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.3e-38 Score=349.85 Aligned_cols=262 Identities=29% Similarity=0.525 Sum_probs=214.8
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEc-------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeee
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVWY-------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAV 571 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~~-------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~ 571 (782)
|+...++|++.+.||+|+||.||+|... ++.||+|+++... .......+..|+.++..+ +|+||+++++++
T Consensus 2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~ 80 (337)
T cd05054 2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-TASEYKALMTELKILIHIGHHLNVVNLLGAC 80 (337)
T ss_pred cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-CHHHHHHHHHHHHHHHhhccCcchhheeeeE
Confidence 4566679999999999999999999753 3569999987543 233456778899999999 799999999987
Q ss_pred ec-CCceeEEEeecCCCCHHHHHhhcC-----------------------------------------------------
Q 003978 572 TS-PQRLCIVTEFLPRGSLFRLLQRNT----------------------------------------------------- 597 (782)
Q Consensus 572 ~~-~~~~~lv~E~~~ggsL~~~l~~~~----------------------------------------------------- 597 (782)
.. ...++++|||+++++|.+++....
T Consensus 81 ~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
T cd05054 81 TKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDE 160 (337)
T ss_pred ecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccch
Confidence 64 456889999999999999985421
Q ss_pred -------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc--ccccCCCCC
Q 003978 598 -------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGT 668 (782)
Q Consensus 598 -------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt 668 (782)
..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.++|+|||++....... .......++
T Consensus 161 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~--ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~ 238 (337)
T cd05054 161 EGDELYKEPLTLEDLISYSFQVARGMEFLASRK--CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLP 238 (337)
T ss_pred hhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCC
Confidence 25788999999999999999999998 9999999999999999999999999997643221 122234567
Q ss_pred CcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCC
Q 003978 669 PQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQ 747 (782)
Q Consensus 669 ~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~ 747 (782)
..|+|||++.+..++.++|||||||++|+|++ |..||......+..............+..+++++.+++.+||+.+|+
T Consensus 239 ~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~ 318 (337)
T cd05054 239 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPE 318 (337)
T ss_pred ccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChh
Confidence 78999999999999999999999999999998 99999765443333222222334455667889999999999999999
Q ss_pred CCCCHHHHHHHHHHHHH
Q 003978 748 CRPSFQELVDKLRDLQR 764 (782)
Q Consensus 748 ~RPs~~ell~~L~~L~~ 764 (782)
+||++.+++++|.++.+
T Consensus 319 ~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 319 DRPTFSELVEILGDLLQ 335 (337)
T ss_pred hCcCHHHHHHHHHHHHh
Confidence 99999999999998865
No 109
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.1e-38 Score=335.47 Aligned_cols=257 Identities=32% Similarity=0.584 Sum_probs=220.7
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEc-CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWY-GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~-~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
+....+|++.++||.|+||.||+|... +..+++|++..... .....+..|+.+++.++||||+++++++.....+++
T Consensus 2 ~~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (261)
T cd05148 2 ERPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDL--LKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYI 79 (261)
T ss_pred cCcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccch--hhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEE
Confidence 445568999999999999999999875 56799999865432 234568889999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 580 VTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
||||+++++|.+++... ...+++..++.++.||+.||.|||+++ |+|+||||+||+|+.++.+||+|||++......
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~ 157 (261)
T cd05148 80 ITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN--SIHRDLAARNILVGEDLVCKVADFGLARLIKED 157 (261)
T ss_pred EEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccCcceEEEcCCceEEEccccchhhcCCc
Confidence 99999999999999753 345889999999999999999999998 999999999999999999999999999766544
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 737 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~L 737 (782)
........++..|++||.+.+..++.++|||||||++|+|++ |..||...+.......+. .......+..++..+.++
T Consensus 158 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 236 (261)
T cd05148 158 VYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQIT-AGYRMPCPAKCPQEIYKI 236 (261)
T ss_pred cccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH-hCCcCCCCCCCCHHHHHH
Confidence 333334456788999999998889999999999999999998 899998887766665554 233455677899999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 738 VESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 738 I~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
|.+||..||.+|||+.++++.|+.+
T Consensus 237 i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 237 MLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred HHHHcCCCchhCcCHHHHHHHHhcC
Confidence 9999999999999999999998753
No 110
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=4.5e-38 Score=332.06 Aligned_cols=257 Identities=34% Similarity=0.608 Sum_probs=218.2
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
|++...+|.+.++||+|+||.||+|.+. ++.|++|++.... .....+.+|+++++.++||||+++++++..+..+
T Consensus 1 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 77 (263)
T cd05052 1 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 77 (263)
T ss_pred CCCchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc---hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCc
Confidence 3556678999999999999999999874 6779999986533 2245688899999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 578 CIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
+++|||+++++|.+++... ...+++..++.++.|++.||+|||+++ ++|+||||+||++++++.+||+|||++....
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~nil~~~~~~~kl~df~~~~~~~ 155 (263)
T cd05052 78 YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRLMT 155 (263)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeecccCcceEEEcCCCcEEeCCCccccccc
Confidence 9999999999999999654 345889999999999999999999988 9999999999999999999999999987654
Q ss_pred cccccc-cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHH
Q 003978 657 ETYLTT-KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 734 (782)
Q Consensus 657 ~~~~~~-~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l 734 (782)
...... ....+++.|+|||.+.+..++.++|||||||++|+|++ |..||...+.......+.. ......+..++.++
T Consensus 156 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 234 (263)
T cd05052 156 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-GYRMERPEGCPPKV 234 (263)
T ss_pred cceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-CCCCCCCCCCCHHH
Confidence 332211 12234668999999999999999999999999999998 9999988776665555432 23456677899999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 735 AAIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 735 ~~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
.++|.+||..||++||++.++++.|+.+
T Consensus 235 ~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 235 YELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 9999999999999999999999998765
No 111
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=4e-38 Score=330.84 Aligned_cols=249 Identities=34% Similarity=0.598 Sum_probs=213.0
Q ss_pred cceeEeeeeccCCcEEEEEEEEcC-CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWYG-SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~~-~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
++|++.+.||+|+||.||++.++. ..+|+|.+....... ..+.+|+.+++.++||||+++++++.....++++|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~ 80 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSE---EDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEF 80 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCccH---HHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEc
Confidence 578999999999999999998854 479999886544332 4677899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc-c
Q 003978 584 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT-T 662 (782)
Q Consensus 584 ~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~-~ 662 (782)
+++++|.+++......+++..++.++.|++.||.|||+++ |+|+||||+||+++.++.+||+|||++......... .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (256)
T cd05114 81 MENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNS--FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSS 158 (256)
T ss_pred CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccCcceEEEcCCCeEEECCCCCccccCCCceecc
Confidence 9999999999765556899999999999999999999998 999999999999999999999999998754332221 1
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHh
Q 003978 663 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 741 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~c 741 (782)
....++..|+|||++.+..++.++|||||||++|+|++ |+.||...+..+....+.. ......+...+..+.++|.+|
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~li~~c 237 (256)
T cd05114 159 SGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISR-GFRLYRPKLASMTVYEVMYSC 237 (256)
T ss_pred CCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-CCCCCCCCCCCHHHHHHHHHH
Confidence 22345678999999998889999999999999999999 9999998887776666543 223445667889999999999
Q ss_pred hhhCCCCCCCHHHHHHHH
Q 003978 742 WHSDPQCRPSFQELVDKL 759 (782)
Q Consensus 742 L~~dP~~RPs~~ell~~L 759 (782)
|..+|++||++.++++.|
T Consensus 238 ~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 238 WHEKPEGRPTFAELLRAI 255 (256)
T ss_pred ccCCcccCcCHHHHHHhh
Confidence 999999999999998775
No 112
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.7e-38 Score=362.17 Aligned_cols=248 Identities=22% Similarity=0.355 Sum_probs=211.3
Q ss_pred cceeEeeeeccCCcEEEEEEEEc---CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY---GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~---~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
..|.+.+.||+|+||.||++... +..||+|.+... .......+.+|+.+|+.++|||||++++++..++.+||||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~ 144 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN--DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIM 144 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEE
Confidence 45999999999999999999863 456888876433 2344456788999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 582 EFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 582 E~~~ggsL~~~l~~---~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
||+++|+|.+++.. ...++++..+..++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++.....
T Consensus 145 E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 145 EYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK--MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred ECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--EEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence 99999999998854 2346889999999999999999999998 999999999999999999999999999865432
Q ss_pred c--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHH
Q 003978 659 Y--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 736 (782)
Q Consensus 659 ~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~ 736 (782)
. ......+||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+.. .....++..+++++++
T Consensus 223 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~ 301 (478)
T PTZ00267 223 VSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLY-GKYDPFPCPVSSGMKA 301 (478)
T ss_pred cccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-CCCCCCCccCCHHHHH
Confidence 2 123345799999999999999999999999999999999999999988777666655532 2233456678999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHH
Q 003978 737 IVESCWHSDPQCRPSFQELVD 757 (782)
Q Consensus 737 LI~~cL~~dP~~RPs~~ell~ 757 (782)
||.+||..||++||++.+++.
T Consensus 302 li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 302 LLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred HHHHHhccChhhCcCHHHHHh
Confidence 999999999999999999964
No 113
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.1e-38 Score=349.21 Aligned_cols=257 Identities=21% Similarity=0.361 Sum_probs=212.5
Q ss_pred cceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
++|++++.||+|+||.||++... ++.||||++.+... .......+.+|+.++..++|+||+++++++..++.+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47999999999999999999874 67899999975332 2334566888999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc-
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL- 660 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~- 660 (782)
||+.+++|.+++......+++..+..++.||+.||+|||+++ |+||||||+||||+.++.+||+|||++........
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 158 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLG--YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTV 158 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEECCCCHHHEEECCCCCEEEEECCceeecCCCCCc
Confidence 999999999999876667899999999999999999999999 99999999999999999999999999865433221
Q ss_pred cccCCCCCCcccCcccccC-----CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC---CCCCH
Q 003978 661 TTKTGKGTPQWMAPEVLRN-----EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP---KDVDP 732 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~~-----~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p---~~~~~ 732 (782)
......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+....+........++ ..++.
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 238 (331)
T cd05597 159 QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSE 238 (331)
T ss_pred cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCH
Confidence 2223468999999999873 446789999999999999999999998877666655554333333333 34789
Q ss_pred HHHHHHHHhhhhCCCC--CCCHHHHHHHHHHHHHHHhhc
Q 003978 733 RWAAIVESCWHSDPQC--RPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 733 ~l~~LI~~cL~~dP~~--RPs~~ell~~L~~L~~~~~~~ 769 (782)
.+++||.+||..++++ |+++.++ +.|+||..
T Consensus 239 ~~~~li~~ll~~~~~r~~r~~~~~~------l~hp~~~~ 271 (331)
T cd05597 239 EAKDLIRRLICSPETRLGRNGLQDF------KDHPFFEG 271 (331)
T ss_pred HHHHHHHHHccCcccccCCCCHHHH------hcCCCCCC
Confidence 9999999998654443 7899999 66788754
No 114
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.3e-38 Score=340.85 Aligned_cols=255 Identities=22% Similarity=0.319 Sum_probs=212.6
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCH-HHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
.|++.++||+|+||.||++.. .++.||||++....... .....+.+|+.+++.++||||+++++.+..++.+|+|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 488999999999999999987 46789999987644322 233556789999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 583 FLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 583 ~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
|+.+++|.+++... ...+++..+..++.|++.||.|||+.+ |+|+||||+||++++++.++|+|||++....... .
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~ 157 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER--IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE-T 157 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-c
Confidence 99999999888553 346899999999999999999999998 9999999999999999999999999987643322 2
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhc--cccccCCCCCCCHHHHHHHH
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGF--MNQRLEIPKDVDPRWAAIVE 739 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~--~~~~~~~p~~~~~~l~~LI~ 739 (782)
.....|++.|+|||++.+..++.++|||||||++|+|++|..||...........+.. ......++..++..+.+||.
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 237 (285)
T cd05605 158 IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICR 237 (285)
T ss_pred cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHH
Confidence 2345789999999999998899999999999999999999999987655332222211 12234556678999999999
Q ss_pred HhhhhCCCCCC-----CHHHHHHHHHHHHHHHhhc
Q 003978 740 SCWHSDPQCRP-----SFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 740 ~cL~~dP~~RP-----s~~ell~~L~~L~~~~~~~ 769 (782)
+||..||.+|| ++.++ +.|+||+.
T Consensus 238 ~~l~~~P~~R~~~~~~~~~~l------~~~~~~~~ 266 (285)
T cd05605 238 QLLTKDPGFRLGCRGEGAEEV------KAHPFFRT 266 (285)
T ss_pred HHccCCHHHhcCCCCCCHHHH------hcCcCccC
Confidence 99999999999 88898 56677754
No 115
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=7.3e-38 Score=358.90 Aligned_cols=254 Identities=20% Similarity=0.280 Sum_probs=199.8
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCC------CceeEEeeeeecC
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRH------PNVLLFMGAVTSP 574 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~H------pnIv~l~~~~~~~ 574 (782)
..++|+++++||+|+||.||+|.+ .+..||||+++... .....+..|+++++.+.| .+|+++++++..+
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~ 203 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE 203 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence 357899999999999999999987 46679999986432 223445667777777654 4588999988754
Q ss_pred -CceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhc-CCCCeeecCCCCCcEEEcCCC----------
Q 003978 575 -QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHW---------- 642 (782)
Q Consensus 575 -~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~-~~~~ivHrDIKp~NILl~~~~---------- 642 (782)
.++|+|||++ |++|.+++.+. ..+++..+..++.||+.||.|||+ .| ||||||||+||||+.++
T Consensus 204 ~~~~~iv~~~~-g~~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~g--IiHrDlKP~NILl~~~~~~~~~~~~~~ 279 (467)
T PTZ00284 204 TGHMCIVMPKY-GPCLLDWIMKH-GPFSHRHLAQIIFQTGVALDYFHTELH--LMHTDLKPENILMETSDTVVDPVTNRA 279 (467)
T ss_pred CceEEEEEecc-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCC--eecCCCCHHHEEEecCCcccccccccc
Confidence 5689999998 77999988764 468999999999999999999997 58 99999999999998765
Q ss_pred ------cEEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 003978 643 ------TVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGA 716 (782)
Q Consensus 643 ------~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~ 716 (782)
.+||+|||.+..... .....+||+.|+|||++.+..++.++|||||||++|||++|++||...+....+..
T Consensus 280 ~~~~~~~vkl~DfG~~~~~~~---~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~ 356 (467)
T PTZ00284 280 LPPDPCRVRICDLGGCCDERH---SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHL 356 (467)
T ss_pred cCCCCceEEECCCCccccCcc---ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 499999998764322 22345799999999999999999999999999999999999999987776544333
Q ss_pred hhcccccc-------------------------CC-C--------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHH
Q 003978 717 VGFMNQRL-------------------------EI-P--------------KDVDPRWAAIVESCWHSDPQCRPSFQELV 756 (782)
Q Consensus 717 i~~~~~~~-------------------------~~-p--------------~~~~~~l~~LI~~cL~~dP~~RPs~~ell 756 (782)
+......+ .. + ...++.+.+||.+||..||++|||+.|+
T Consensus 357 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~- 435 (467)
T PTZ00284 357 MEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQM- 435 (467)
T ss_pred HHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHH-
Confidence 22111000 00 0 0124567899999999999999999999
Q ss_pred HHHHHHHHHHhhcccC
Q 003978 757 DKLRDLQRQYFQASRS 772 (782)
Q Consensus 757 ~~L~~L~~~~~~~~~~ 772 (782)
|.|+||+....
T Consensus 436 -----L~Hp~~~~~~~ 446 (467)
T PTZ00284 436 -----TTHPYVLKYYP 446 (467)
T ss_pred -----hcCccccccCC
Confidence 67899976443
No 116
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=5.1e-39 Score=350.19 Aligned_cols=238 Identities=32% Similarity=0.449 Sum_probs=201.1
Q ss_pred eeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHH-HHHhCCCCceeEEeeeeecCCceeEEEeecCC
Q 003978 511 EQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVS-LMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPR 586 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~-il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~g 586 (782)
++||+|+||.||+|.+ .++.||+|++.+... .......+..|+. +++.++||||+++++++...+.+|+|||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999998 467799999976543 2223344555554 67889999999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003978 587 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 666 (782)
Q Consensus 587 gsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 666 (782)
++|..++... ..+++..+..++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++.............
T Consensus 81 ~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (321)
T cd05603 81 GELFFHLQRE-RCFLEPRARFYAAEVASAIGYLHSLN--IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFC 157 (321)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcccccc
Confidence 9999988754 46888899999999999999999998 99999999999999999999999999875433333334557
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCC
Q 003978 667 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDP 746 (782)
Q Consensus 667 Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP 746 (782)
||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....++...+..+.++|.+||+.||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~li~~~l~~~p 235 (321)
T cd05603 158 GTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNIL--HKPLQLPGGKTVAACDLLVGLLHKDQ 235 (321)
T ss_pred CCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHh--cCCCCCCCCCCHHHHHHHHHHccCCH
Confidence 9999999999999999999999999999999999999999887766665553 34556777889999999999999999
Q ss_pred CCCCCHH
Q 003978 747 QCRPSFQ 753 (782)
Q Consensus 747 ~~RPs~~ 753 (782)
.+||++.
T Consensus 236 ~~R~~~~ 242 (321)
T cd05603 236 RRRLGAK 242 (321)
T ss_pred hhcCCCC
Confidence 9999753
No 117
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=4.9e-38 Score=329.08 Aligned_cols=249 Identities=28% Similarity=0.427 Sum_probs=216.6
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
+|.+.+.||+|+||.||++.. .+..|++|.+............+.+|+++++.++||||+++++.+...+.+|+||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 488899999999999999987 467899999877655566677889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 584 LPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 584 ~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
+++++|.+++... ...+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++..........
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~--i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~ 158 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK--ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFA 158 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEEeCCCCEEEcccccceeccCccchh
Confidence 9999999999764 456889999999999999999999988 9999999999999999999999999987655443333
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhh
Q 003978 663 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCW 742 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL 742 (782)
....|++.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. ......++..++.++.++|.+||
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l 237 (256)
T cd08529 159 NTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKII-RGVFPPVSQMYSQQLAQLIDQCL 237 (256)
T ss_pred hccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-cCCCCCCccccCHHHHHHHHHHc
Confidence 44578999999999999889999999999999999999999998877655544442 22234455578999999999999
Q ss_pred hhCCCCCCCHHHHHH
Q 003978 743 HSDPQCRPSFQELVD 757 (782)
Q Consensus 743 ~~dP~~RPs~~ell~ 757 (782)
..+|++||++.++++
T Consensus 238 ~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 238 TKDYRQRPDTFQLLR 252 (256)
T ss_pred cCCcccCcCHHHHhh
Confidence 999999999999954
No 118
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=4e-39 Score=351.73 Aligned_cols=252 Identities=29% Similarity=0.417 Sum_probs=207.8
Q ss_pred eeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHH-HHHhCCCCceeEEeeeeecCCceeEEEeecCC
Q 003978 511 EQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVS-LMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPR 586 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~-il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~g 586 (782)
+.||+|+||.||++.. .++.||||++.+... .......+..|.. +++.++||||+++++++...+.+|+||||+.+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4699999999999987 477899999976533 2233344555554 57789999999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003978 587 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 666 (782)
Q Consensus 587 gsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 666 (782)
++|..++... ..+++..+..++.||+.||.|||++| |+||||||+||||+.++.+||+|||++..............
T Consensus 81 ~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~g--ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (325)
T cd05604 81 GELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSIN--IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFC 157 (325)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCccccc
Confidence 9999988754 46899999999999999999999998 99999999999999999999999999875433333334557
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCC
Q 003978 667 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDP 746 (782)
Q Consensus 667 Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP 746 (782)
||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....+++.++..+.++|.+||..||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ll~~ll~~~p 235 (325)
T cd05604 158 GTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNIL--HKPLVLRPGASLTAWSILEELLEKDR 235 (325)
T ss_pred CChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHH--cCCccCCCCCCHHHHHHHHHHhccCH
Confidence 9999999999999999999999999999999999999999887766665553 23445566789999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhc
Q 003978 747 QCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 747 ~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
.+||++.+.++.+ +.|+||+.
T Consensus 236 ~~R~~~~~~~~~i--~~h~~f~~ 256 (325)
T cd05604 236 QRRLGAKEDFLEI--QEHPFFES 256 (325)
T ss_pred HhcCCCCCCHHHH--hcCCCcCC
Confidence 9999875332222 45677754
No 119
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.1e-38 Score=339.25 Aligned_cols=264 Identities=30% Similarity=0.584 Sum_probs=221.4
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEcC---------CeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEe
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYG---------SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFM 568 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~---------~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~ 568 (782)
.+++..++|.+++.||+|+||.||++.+.+ ..+|+|+++... .......+..|+.+++.+ +||||++++
T Consensus 12 ~~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~~i~~~~ 90 (307)
T cd05098 12 RWEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLL 90 (307)
T ss_pred cceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHHHHHHHHHHhcCCCCEeeEE
Confidence 456777899999999999999999997632 359999987543 233456788899999999 799999999
Q ss_pred eeeecCCceeEEEeecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 003978 569 GAVTSPQRLCIVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKS 633 (782)
Q Consensus 569 ~~~~~~~~~~lv~E~~~ggsL~~~l~~~~---------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp 633 (782)
+++...+.+|+||||+.+++|.+++.... ..+++..++.++.|++.||+|||+++ ++|+||||
T Consensus 91 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g--i~H~dlkp 168 (307)
T cd05098 91 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK--CIHRDLAA 168 (307)
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC--cccccccH
Confidence 99999999999999999999999997532 24788899999999999999999998 99999999
Q ss_pred CcEEEcCCCcEEEEecCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 003978 634 SNLLVDKHWTVKVGDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNS 710 (782)
Q Consensus 634 ~NILl~~~~~vkL~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~ 710 (782)
+|||++.++.+||+|||++........ ......+++.|+|||.+.+..++.++|||||||++|+|++ |..||...+.
T Consensus 169 ~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~ 248 (307)
T cd05098 169 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 248 (307)
T ss_pred HheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH
Confidence 999999999999999999875543211 1122234578999999999889999999999999999998 8999987776
Q ss_pred HHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 711 MQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 711 ~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
......+. .......+..++.++.+||.+||..+|++||++.++++.|+++...-
T Consensus 249 ~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~ 303 (307)
T cd05098 249 EELFKLLK-EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT 303 (307)
T ss_pred HHHHHHHH-cCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence 55554443 23345667788999999999999999999999999999999987653
No 120
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=6.1e-39 Score=350.29 Aligned_cols=250 Identities=28% Similarity=0.415 Sum_probs=204.8
Q ss_pred eeeccCCcEEEEEEEEc--CCeEEEEEEeccCCC-HHHHHHHHHHH-HHHHhCCCCceeEEeeeeecCCceeEEEeecCC
Q 003978 511 EQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYS-DEVIHSFRQEV-SLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPR 586 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~-~~~~~~~~~Ei-~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~g 586 (782)
+.||+|+||.||+|.+. ++.||+|++...... ......+..|. .+++.++||||+++++++...+.+|+||||+.+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999884 556999999764321 12223334444 457888999999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003978 587 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 666 (782)
Q Consensus 587 gsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 666 (782)
++|.+++... ..+.+..+..++.||+.||.|||++| |+||||||+||||+.++.+||+|||+++............+
T Consensus 81 ~~L~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~g--iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 157 (325)
T cd05602 81 GELFYHLQRE-RCFLEPRARFYAAEIASALGYLHSLN--IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFC 157 (325)
T ss_pred CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCccccc
Confidence 9999999764 45788888899999999999999999 99999999999999999999999999875433333334567
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCC
Q 003978 667 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDP 746 (782)
Q Consensus 667 Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP 746 (782)
||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....+++.+++.+.++|.+||++||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~li~~~l~~~p 235 (325)
T cd05602 158 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL--NKPLQLKPNITNSARHLLEGLLQKDR 235 (325)
T ss_pred CCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHH--hCCcCCCCCCCHHHHHHHHHHcccCH
Confidence 9999999999999999999999999999999999999999887776665552 23445667899999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHh
Q 003978 747 QCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 747 ~~RPs~~ell~~L~~L~~~~~ 767 (782)
.+||++.+.+..+ +.|.||
T Consensus 236 ~~R~~~~~~~~~i--~~~~~~ 254 (325)
T cd05602 236 TKRLGAKDDFMEI--KNHIFF 254 (325)
T ss_pred HHCCCCCCCHHHH--hcCccc
Confidence 9999876443322 244555
No 121
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=5.5e-39 Score=351.13 Aligned_cols=256 Identities=25% Similarity=0.387 Sum_probs=208.1
Q ss_pred eeeccCCcEEEEEEEE--cCCeEEEEEEeccCCC-HHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCceeEEEeecCC
Q 003978 511 EQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIVTEFLPR 586 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~-~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lv~E~~~g 586 (782)
++||+|+||.||+|.. .++.||+|++++.... ......+..|+.++..+ .||||+++++++...+.+|+|||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999987 4567999999875432 34556788899999888 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003978 587 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 666 (782)
Q Consensus 587 gsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 666 (782)
++|..++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++............+
T Consensus 81 ~~L~~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (327)
T cd05617 81 GDLMFHMQRQ-RKLPEEHARFYAAEICIALNFLHERG--IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFC 157 (327)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceeccc
Confidence 9999988754 36899999999999999999999998 99999999999999999999999999875333323334567
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC------hHHHHHHhhccccccCCCCCCCHHHHHHHHH
Q 003978 667 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN------SMQVIGAVGFMNQRLEIPKDVDPRWAAIVES 740 (782)
Q Consensus 667 Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~------~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~ 740 (782)
||+.|+|||++.+..++.++|||||||++|+|++|..||.... ........ .......+|..++..+.++|.+
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~li~~ 236 (327)
T cd05617 158 GTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQV-ILEKPIRIPRFLSVKASHVLKG 236 (327)
T ss_pred CCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHH-HHhCCCCCCCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999996321 11222222 1334556788899999999999
Q ss_pred hhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 741 CWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 741 cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
||..||.+|+++......-.-+.|+||+.+
T Consensus 237 ~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~ 266 (327)
T cd05617 237 FLNKDPKERLGCQPQTGFSDIKSHTFFRSI 266 (327)
T ss_pred HhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence 999999999985321111111567888654
No 122
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.9e-38 Score=353.04 Aligned_cols=256 Identities=24% Similarity=0.372 Sum_probs=209.9
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC-----cee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ-----RLC 578 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~-----~~~ 578 (782)
+|+++++||+|+||.||++.. .++.||||.+............+.+|+.+++.++||||+++++++..+. .+|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478899999999999999986 5788999998654434445567889999999999999999999998776 789
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
+||||+. ++|.+++... ..+++..+..++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++.....
T Consensus 81 lv~e~~~-~~l~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP-QPLSSDHVKVFLYQILRGLKYLHSAG--ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPD 156 (372)
T ss_pred EEeeccc-cCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChHHEEECCCCCEEeccccceeecccC
Confidence 9999995 5888888653 46899999999999999999999998 999999999999999999999999999754332
Q ss_pred c-ccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc--------------
Q 003978 659 Y-LTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-------------- 722 (782)
Q Consensus 659 ~-~~~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~-------------- 722 (782)
. .......+++.|+|||++.+. .++.++|||||||++|+|++|+.||...+.......+.....
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 236 (372)
T cd07853 157 ESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGA 236 (372)
T ss_pred ccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHH
Confidence 1 122234679999999999874 478999999999999999999999988776544433311100
Q ss_pred ----------c------cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 723 ----------R------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 723 ----------~------~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
. ..+....++++.+||.+||..||.+|||+.++ |.|+||+..+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~------l~hp~~~~~~ 295 (372)
T cd07853 237 RAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADA------LAHPYLDEGR 295 (372)
T ss_pred HHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHH------hcCHhhCCCc
Confidence 0 12234568899999999999999999999999 6788987643
No 123
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=7e-39 Score=335.98 Aligned_cols=252 Identities=33% Similarity=0.539 Sum_probs=210.1
Q ss_pred eeEeeeeccCCcEEEEEEEEcC--CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeec
Q 003978 507 LTIGEQIGQGSCGTVYHAVWYG--SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFL 584 (782)
Q Consensus 507 y~i~~~IG~G~~G~Vy~~~~~~--~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~ 584 (782)
|++++.||+|+||.||++...+ ..||+|++..............+|+.+++.++||||+++++++.....++++|||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 7899999999999999999854 46999999887655555455567999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccC
Q 003978 585 PRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKT 664 (782)
Q Consensus 585 ~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 664 (782)
.+++|.+++.. ...+++..++.++.||+.||.+||+++ |+|+||||+||+++.++.++|+|||.+............
T Consensus 81 ~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~Lh~~~--i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 157 (260)
T PF00069_consen 81 PGGSLQDYLQK-NKPLSEEEILKIAYQILEALAYLHSKG--IVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNP 157 (260)
T ss_dssp TTEBHHHHHHH-HSSBBHHHHHHHHHHHHHHHHHHHHTT--EEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSS
T ss_pred ccccccccccc-ccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccc
Confidence 99899999983 346899999999999999999999998 999999999999999999999999998754333334445
Q ss_pred CCCCCcccCccccc-CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc---ccc--cCCCCCCCHHHHHHH
Q 003978 665 GKGTPQWMAPEVLR-NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM---NQR--LEIPKDVDPRWAAIV 738 (782)
Q Consensus 665 ~~Gt~~y~aPE~l~-~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~---~~~--~~~p~~~~~~l~~LI 738 (782)
..+++.|+|||++. +..++.++||||||+++|+|++|..||...........+... ... .......+..+.+||
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 237 (260)
T PF00069_consen 158 FVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLI 237 (260)
T ss_dssp SSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHH
Confidence 67899999999998 888899999999999999999999999987433322222111 111 111122348999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 739 ESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 739 ~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
.+||..||++||++.++ ++|+||
T Consensus 238 ~~~l~~~p~~R~~~~~l------~~~~~~ 260 (260)
T PF00069_consen 238 KKMLSKDPEQRPSAEEL------LKHPWF 260 (260)
T ss_dssp HHHSSSSGGGSTTHHHH------HTSGGG
T ss_pred HHHccCChhHCcCHHHH------hcCCCC
Confidence 99999999999999999 566775
No 124
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=4.8e-38 Score=334.41 Aligned_cols=256 Identities=33% Similarity=0.578 Sum_probs=213.7
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEcC-------CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG-------SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS 573 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~~-------~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~ 573 (782)
++..++|++.+.||+|+||.||++.+.+ ..||||++.... .......+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~ 80 (277)
T cd05062 2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 80 (277)
T ss_pred cccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 4556789999999999999999998643 459999886433 22344568899999999999999999999999
Q ss_pred CCceeEEEeecCCCCHHHHHhhcC---------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcE
Q 003978 574 PQRLCIVTEFLPRGSLFRLLQRNT---------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTV 644 (782)
Q Consensus 574 ~~~~~lv~E~~~ggsL~~~l~~~~---------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~v 644 (782)
....++||||+++++|.+++.... ..+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--~vH~dlkp~Nil~~~~~~~ 158 (277)
T cd05062 81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTV 158 (277)
T ss_pred CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCcchheEEEcCCCCE
Confidence 999999999999999999996532 23567888999999999999999988 9999999999999999999
Q ss_pred EEEecCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccc
Q 003978 645 KVGDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMN 721 (782)
Q Consensus 645 kL~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~ 721 (782)
+|+|||++........ ......+++.|+|||.+.+..++.++|||||||++|+|++ |..||...........+. ..
T Consensus 159 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~-~~ 237 (277)
T cd05062 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVM-EG 237 (277)
T ss_pred EECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-cC
Confidence 9999999875433211 1122355788999999999889999999999999999999 799998887766555443 23
Q ss_pred cccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003978 722 QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLR 760 (782)
Q Consensus 722 ~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~ 760 (782)
....++..++..+.++|.+||+.||++||++.++++.|+
T Consensus 238 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 238 GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 344567788999999999999999999999999998875
No 125
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.6e-38 Score=354.24 Aligned_cols=254 Identities=22% Similarity=0.319 Sum_probs=204.1
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
+...+|++++.||+|+||.||+|.+ .++.||||.... ..+.+|+++|+.++|||||++++++..+...++
T Consensus 89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~l 160 (391)
T PHA03212 89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR--------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCL 160 (391)
T ss_pred cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh--------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEE
Confidence 3456899999999999999999987 467799997532 345789999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc-
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET- 658 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~- 658 (782)
+||++ +++|..++... ..+++..++.++.||+.||.|||+++ ||||||||+||||+.++.+||+|||+++.....
T Consensus 161 v~e~~-~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~ylH~~~--IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 161 ILPRY-KTDLYCYLAAK-RNIAICDILAIERSVLRAIQYLHENR--IIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred EEecC-CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHhEEEcCCCCEEEEeCCccccccccc
Confidence 99999 56899888654 35889999999999999999999998 999999999999999999999999999753322
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh-------HHHHHHhhc------------
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS-------MQVIGAVGF------------ 719 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~-------~~~~~~i~~------------ 719 (782)
........||+.|+|||++.+..++.++|||||||++|+|++|..||..... ...+..+..
T Consensus 237 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~ 316 (391)
T PHA03212 237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID 316 (391)
T ss_pred ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence 1222345799999999999999999999999999999999999987643211 000100000
Q ss_pred ------------ccccc----CCC-----CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 720 ------------MNQRL----EIP-----KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 720 ------------~~~~~----~~p-----~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
..... ..+ ..++.++.+||.+||..||.+|||+.++ |.|+||+.....
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~el------L~hp~f~~~~~~ 385 (391)
T PHA03212 317 AQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEAL------LDFAAFQDIPDP 385 (391)
T ss_pred hhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHH------hcChhhccCCCC
Confidence 00000 000 1356789999999999999999999999 678999886543
No 126
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=6.3e-38 Score=330.34 Aligned_cols=257 Identities=33% Similarity=0.568 Sum_probs=217.2
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEc-CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVWY-GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~~-~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
|++..++|++.+.||+|+||.||++.+. +..||||.++..... .+.+.+|+.+++.++||||+++++++...+..|
T Consensus 1 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05068 1 WEIDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD---PKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIY 77 (261)
T ss_pred CccchhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCccc---HHHHHHHHHHHHHCCCCCccceeEEEecCCCee
Confidence 3456678999999999999999999874 456999998654432 356788999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
++|||+.+++|.+++.... ..+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||++.....
T Consensus 78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05068 78 IVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN--YIHRDLAARNVLVGENNICKVADFGLARVIKE 155 (261)
T ss_pred eeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCcceEEEcCCCCEEECCcceEEEccC
Confidence 9999999999999997543 46899999999999999999999998 99999999999999999999999999876553
Q ss_pred ccccc-cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHH
Q 003978 658 TYLTT-KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWA 735 (782)
Q Consensus 658 ~~~~~-~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~ 735 (782)
..... .....+..|+|||.+.+..++.++|||||||++|+|++ |+.||...........+.. ......+..++..+.
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 234 (261)
T cd05068 156 DIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQ-GYRMPCPPGCPKELY 234 (261)
T ss_pred CcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-CCCCCCCCcCCHHHH
Confidence 32111 11223457999999999889999999999999999999 9999998877666655532 223445667899999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
++|.+||..+|.+||++.++++.|+++
T Consensus 235 ~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 235 DIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred HHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 999999999999999999999988753
No 127
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=6.2e-38 Score=340.70 Aligned_cols=258 Identities=28% Similarity=0.507 Sum_probs=216.5
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCC----eEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGS----DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~----~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
..+|++.+.||+|+||.||+|.+ .+. .||||+++.. ......+.+.+|+.+++.++||||+++++++... ..
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~ 83 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV 83 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cc
Confidence 45799999999999999999986 333 3899998643 2344557788999999999999999999998764 57
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
++++||+.+|+|.+++......+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 84 ~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~--iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 84 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred eeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcC--eeccccchhheEecCCCcEEEccccccccccC
Confidence 8999999999999999877667889999999999999999999998 99999999999999999999999999986543
Q ss_pred ccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHH
Q 003978 658 TYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 734 (782)
Q Consensus 658 ~~~--~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l 734 (782)
... ......++..|++||++.+..++.++|||||||++|||++ |..||......+....+ ........+..++.++
T Consensus 162 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 240 (316)
T cd05108 162 DEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGERLPQPPICTIDV 240 (316)
T ss_pred CCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-hCCCCCCCCCCCCHHH
Confidence 221 1222345678999999999999999999999999999997 99999887665544333 2333445567789999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 735 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 735 ~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
.++|.+||..||.+||++.+++..|.++.+..
T Consensus 241 ~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 241 YMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 99999999999999999999999998886643
No 128
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.3e-38 Score=348.72 Aligned_cols=257 Identities=21% Similarity=0.368 Sum_probs=213.3
Q ss_pred cceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
++|++.++||+|+||.||++... ++.||+|++.+... .......+..|+.++..++|+||+++++++..+..+|+||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 47999999999999999999874 56699999865332 2334456788999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc-cc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET-YL 660 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~-~~ 660 (782)
||+.+|+|.+++.+....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...... ..
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~--iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~ 158 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLH--YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV 158 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEECCCCCEEEeecchheecccCCcc
Confidence 999999999999876667899999999999999999999998 999999999999999999999999998654322 22
Q ss_pred cccCCCCCCcccCccccc-----CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC---CCCCH
Q 003978 661 TTKTGKGTPQWMAPEVLR-----NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP---KDVDP 732 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~-----~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p---~~~~~ 732 (782)
.....+||+.|+|||++. ...++.++|||||||++|+|++|+.||...+..+....+........+| ..+++
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~ 238 (332)
T cd05623 159 QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSE 238 (332)
T ss_pred eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCH
Confidence 223457999999999986 3457889999999999999999999999888777776664433333333 35799
Q ss_pred HHHHHHHHhhhhCCCC--CCCHHHHHHHHHHHHHHHhhc
Q 003978 733 RWAAIVESCWHSDPQC--RPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 733 ~l~~LI~~cL~~dP~~--RPs~~ell~~L~~L~~~~~~~ 769 (782)
++++||.+||..++.+ |+++.++ ++|+||+.
T Consensus 239 ~~~~li~~ll~~~~~r~~r~~~~~~------~~h~~f~~ 271 (332)
T cd05623 239 DAKDLIRRLICSREHRLGQNGIEDF------KQHPFFTG 271 (332)
T ss_pred HHHHHHHHHccChhhhcCCCCHHHH------hCCCCcCC
Confidence 9999999999765544 6899999 56777754
No 129
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.4e-38 Score=348.63 Aligned_cols=257 Identities=20% Similarity=0.354 Sum_probs=212.4
Q ss_pred cceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
++|++.+.||+|+||.||++... ++.||||++.+... .......+..|+.++..+.|+||+++++++..++.+|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47999999999999999999874 56799999875332 2334456788999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc-
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL- 660 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~- 660 (782)
||+.||+|.+++......+++..+..++.|++.||.|||+++ |+||||||+||||+.++.+||+|||++........
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~--iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 158 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLH--YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV 158 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCchHHEEEcCCCCEEEEeccceeeccCCCce
Confidence 999999999999876567899999999999999999999998 99999999999999999999999999875543221
Q ss_pred cccCCCCCCcccCcccccC-----CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCC---CCCH
Q 003978 661 TTKTGKGTPQWMAPEVLRN-----EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPK---DVDP 732 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~~-----~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~---~~~~ 732 (782)
......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+.......+........+|. .++.
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~ 238 (331)
T cd05624 159 QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSE 238 (331)
T ss_pred eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCH
Confidence 2234579999999999876 4578899999999999999999999988877766666544333344443 4689
Q ss_pred HHHHHHHHhhhhCCCC--CCCHHHHHHHHHHHHHHHhhc
Q 003978 733 RWAAIVESCWHSDPQC--RPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 733 ~l~~LI~~cL~~dP~~--RPs~~ell~~L~~L~~~~~~~ 769 (782)
++++||.+||..++.+ |++++++ +.|+||+.
T Consensus 239 ~~~~li~~ll~~~~~~~~~~~~~~~------~~h~~f~~ 271 (331)
T cd05624 239 EAKDLIQRLICSRERRLGQNGIEDF------KKHAFFEG 271 (331)
T ss_pred HHHHHHHHHccCchhhcCCCCHHHH------hcCCCcCC
Confidence 9999999999866544 4688888 45666643
No 130
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=7.2e-38 Score=329.54 Aligned_cols=250 Identities=34% Similarity=0.600 Sum_probs=213.1
Q ss_pred ccceeEeeeeccCCcEEEEEEEEcCC-eEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWYGS-DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~~~-~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
.++|++.+.||+|+||.||++.+.+. .+|||.+....... ..+.+|+.+++.++||||+++++++.....+|++||
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTE 79 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccH---HHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEE
Confidence 35799999999999999999987654 59999887544332 467889999999999999999999998889999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc-c
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL-T 661 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~-~ 661 (782)
|+.+++|.+++......+++..++.++.||+.||.|||+.+ |+|+||||.||+++.++.+||+|||+++....... .
T Consensus 80 ~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~ 157 (256)
T cd05113 80 YMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQ--FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTS 157 (256)
T ss_pred cCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccCcceEEEcCCCCEEECCCccceecCCCceee
Confidence 99999999999876557899999999999999999999998 99999999999999999999999999875443321 1
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHH
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVES 740 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~ 740 (782)
.....++..|++||.+.+..++.++|||||||++|+|++ |..||...+.......+.. ......+...+..+++++.+
T Consensus 158 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~ 236 (256)
T cd05113 158 SVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQ-GLRLYRPHLASEKVYAIMYS 236 (256)
T ss_pred cCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHH
Confidence 112345678999999998889999999999999999998 9999988877665555532 23344566788999999999
Q ss_pred hhhhCCCCCCCHHHHHHHH
Q 003978 741 CWHSDPQCRPSFQELVDKL 759 (782)
Q Consensus 741 cL~~dP~~RPs~~ell~~L 759 (782)
||..||.+||++.++++.|
T Consensus 237 cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 237 CWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred HcCCCcccCCCHHHHHHhh
Confidence 9999999999999998765
No 131
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-38 Score=345.18 Aligned_cols=260 Identities=25% Similarity=0.388 Sum_probs=214.3
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEcC-CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCcee
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG-SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~~-~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~ 578 (782)
.+....|+++++||+|+.+.||++...+ +.||+|.+.....+...+..+.+|+.+|.+|+ |.+||++|+|-..++.+|
T Consensus 357 ~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lY 436 (677)
T KOG0596|consen 357 KVKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLY 436 (677)
T ss_pred EECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEE
Confidence 4556789999999999999999998754 55888888777778889999999999999995 999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc-
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE- 657 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~- 657 (782)
|||||- ..+|..+|++.....+.-.+..+..||+.++.++|++| |||.||||.|+|+-+. .+||+|||+|.....
T Consensus 437 mvmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~g--IVHSDLKPANFLlVkG-~LKLIDFGIA~aI~~D 512 (677)
T KOG0596|consen 437 MVMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHG--IVHSDLKPANFLLVKG-RLKLIDFGIANAIQPD 512 (677)
T ss_pred EEeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhc--eeecCCCcccEEEEee-eEEeeeechhcccCcc
Confidence 999998 55999999877665664578888999999999999999 9999999999999875 999999999986543
Q ss_pred -ccccccCCCCCCcccCcccccCCC-----------CCchhHHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHhhcccccc
Q 003978 658 -TYLTTKTGKGTPQWMAPEVLRNEP-----------SDEKSDVYSFGVILWELATEKIPWDNLNS-MQVIGAVGFMNQRL 724 (782)
Q Consensus 658 -~~~~~~~~~Gt~~y~aPE~l~~~~-----------~s~~sDIwSLG~ll~elltG~~Pf~~~~~-~~~~~~i~~~~~~~ 724 (782)
......+.+||+.||+||.+.... .+.++|||||||+||+|+.|+.||..... ...+.+|...+-.+
T Consensus 513 TTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~I 592 (677)
T KOG0596|consen 513 TTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEI 592 (677)
T ss_pred ccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccc
Confidence 334455678999999999986433 35689999999999999999999986642 23333333222234
Q ss_pred CCCCCCCHH-HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 725 EIPKDVDPR-WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 725 ~~p~~~~~~-l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
++|..-+.. +.++++.||.+||++||+..+| |+|+|.+=+
T Consensus 593 efp~~~~~~~li~~mK~CL~rdPkkR~si~eL------LqhpFl~~~ 633 (677)
T KOG0596|consen 593 EFPDIPENDELIDVMKCCLARDPKKRWSIPEL------LQHPFLQIQ 633 (677)
T ss_pred cccCCCCchHHHHHHHHHHhcCcccCCCcHHH------hcCcccccc
Confidence 555544443 9999999999999999999999 567776543
No 132
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3e-39 Score=337.99 Aligned_cols=254 Identities=24% Similarity=0.365 Sum_probs=207.6
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC--C---ce
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP--Q---RL 577 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~---~~ 577 (782)
-.|+..+++|.|+||.||++.. .+..||||.+-.... --.+|+++|+.++|||||+++.+|... . .+
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r------~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR------YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC------cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 3688899999999999999986 456799998754432 123699999999999999999888532 2 35
Q ss_pred eEEEeecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC-CcEEEEecCCCc
Q 003978 578 CIVTEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH-WTVKVGDFGLSR 653 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~---~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~-~~vkL~DFGla~ 653 (782)
.+|||||+. +|++.++. .+..++.-.+..+.+||++||+|||+.| |+||||||.|+|||.+ |.+||||||.|+
T Consensus 98 nlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~--IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 98 NLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG--ICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC--cccCCCChheEEEcCCCCeEEeccCCcce
Confidence 689999965 99999974 3567888899999999999999999988 9999999999999976 899999999998
Q ss_pred ccccccccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc--------
Q 003978 654 LKHETYLTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL-------- 724 (782)
Q Consensus 654 ~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~-------- 724 (782)
........ .+...|..|+|||++.|. .|+.+.||||.|||+.||+-|.+-|.+.+....+..+....+.+
T Consensus 175 ~L~~~epn-iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~m 253 (364)
T KOG0658|consen 175 VLVKGEPN-ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSM 253 (364)
T ss_pred eeccCCCc-eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhc
Confidence 76544322 355679999999999874 57999999999999999999999999887766554432221110
Q ss_pred ------------------C-CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcC
Q 003978 725 ------------------E-IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTV 774 (782)
Q Consensus 725 ------------------~-~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~ 774 (782)
. +....++++.+|+.++|..+|.+|.++.++ |.|+||++-+...
T Consensus 254 n~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~------l~h~fFdelr~~~ 316 (364)
T KOG0658|consen 254 NPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEA------LAHPFFDELRDPN 316 (364)
T ss_pred CcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHH------hcchhhHHhhCcC
Confidence 1 334678999999999999999999999999 7889998887763
No 133
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=6.8e-38 Score=332.50 Aligned_cols=257 Identities=34% Similarity=0.588 Sum_probs=217.9
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEcC-------CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeee
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYG-------SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT 572 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~-------~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~ 572 (782)
|++..++|++.+.||+|+||.||++...+ ..||+|.+.... .......+.+|+.+++.++||||+++++++.
T Consensus 1 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~ 79 (277)
T cd05032 1 WELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVS 79 (277)
T ss_pred CccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEc
Confidence 45667899999999999999999998743 469999986443 2334567888999999999999999999999
Q ss_pred cCCceeEEEeecCCCCHHHHHhhcC---------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc
Q 003978 573 SPQRLCIVTEFLPRGSLFRLLQRNT---------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT 643 (782)
Q Consensus 573 ~~~~~~lv~E~~~ggsL~~~l~~~~---------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~ 643 (782)
.....|+||||+++++|.+++.... ..+++..++.++.||+.||.|||+.+ |+|+||||+|||++.++.
T Consensus 80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~di~p~nill~~~~~ 157 (277)
T cd05032 80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK--FVHRDLAARNCMVAEDLT 157 (277)
T ss_pred CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccChheEEEcCCCC
Confidence 9999999999999999999996422 23677889999999999999999988 999999999999999999
Q ss_pred EEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcc
Q 003978 644 VKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFM 720 (782)
Q Consensus 644 vkL~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~ 720 (782)
+||+|||+++...... .......++..|+|||.+.+..++.++|||||||++|+|++ |..||...+.......+. .
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~-~ 236 (277)
T cd05032 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI-D 236 (277)
T ss_pred EEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh-c
Confidence 9999999987543321 12233456889999999988889999999999999999998 999998887776665554 3
Q ss_pred ccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003978 721 NQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLR 760 (782)
Q Consensus 721 ~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~ 760 (782)
.....+|..++.++.+||.+||..+|++|||+.++++.|+
T Consensus 237 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 237 GGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 3455677888999999999999999999999999998875
No 134
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1e-37 Score=333.00 Aligned_cols=255 Identities=31% Similarity=0.575 Sum_probs=213.9
Q ss_pred cccceeEeeeeccCCcEEEEEEEE------cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW------YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 576 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~------~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 576 (782)
.+.+|++.+.||+|+||.||+|.. .+..+++|.+.... .......+.+|+.+++.++||||+++++++.....
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 81 (283)
T cd05090 3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQP 81 (283)
T ss_pred ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCc
Confidence 346899999999999999999975 34569999986533 34445678899999999999999999999999999
Q ss_pred eeEEEeecCCCCHHHHHhhcC----------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC
Q 003978 577 LCIVTEFLPRGSLFRLLQRNT----------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK 640 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~----------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~ 640 (782)
.|++|||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+|+||||+|||++.
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~nili~~ 159 (283)
T cd05090 82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF--FVHKDLAARNILIGE 159 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC--eehhccccceEEEcC
Confidence 999999999999999985321 24778889999999999999999998 999999999999999
Q ss_pred CCcEEEEecCCCcccccc--cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHh
Q 003978 641 HWTVKVGDFGLSRLKHET--YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAV 717 (782)
Q Consensus 641 ~~~vkL~DFGla~~~~~~--~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i 717 (782)
++.+||+|||+++..... ........++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~ 239 (283)
T cd05090 160 QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMV 239 (283)
T ss_pred CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 999999999999754322 112233446778999999998889999999999999999998 99999887765555444
Q ss_pred hccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003978 718 GFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRD 761 (782)
Q Consensus 718 ~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~ 761 (782)
. ....+..+..+++.+.++|.+||..||.+||++.++++.|+.
T Consensus 240 ~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 240 R-KRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred H-cCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 3 233445677889999999999999999999999999988764
No 135
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=4.4e-38 Score=334.48 Aligned_cols=253 Identities=30% Similarity=0.557 Sum_probs=214.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc-------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY-------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 576 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~-------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 576 (782)
..+|.+.+.||+|+||.||+|... +..||||+++... ..+....+.+|+++|+.++||||+++++++.....
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 82 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA-SNDARKDFEREAELLTNFQHENIVKFYGVCTEGDP 82 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC-CHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence 467899999999999999999763 3569999986543 33455788999999999999999999999999999
Q ss_pred eeEEEeecCCCCHHHHHhhcC-------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNT-------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT 643 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~-------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~ 643 (782)
.+++|||+++++|.+++.... ..+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~--i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH--FVHRDLATRNCLVGYDLV 160 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC--eeccccccceEEEcCCCe
Confidence 999999999999999997542 34788899999999999999999998 999999999999999999
Q ss_pred EEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcc
Q 003978 644 VKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFM 720 (782)
Q Consensus 644 vkL~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~ 720 (782)
+||+|||++....... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||...+.......+. .
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~-~ 239 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECIT-Q 239 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-c
Confidence 9999999987543221 11223346789999999999999999999999999999998 999998877776665553 2
Q ss_pred ccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003978 721 NQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLR 760 (782)
Q Consensus 721 ~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~ 760 (782)
......+..++..+++||.+||..||.+||++.++++.|+
T Consensus 240 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 240 GRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 2233455678999999999999999999999999998875
No 136
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.1e-37 Score=335.65 Aligned_cols=258 Identities=30% Similarity=0.576 Sum_probs=215.5
Q ss_pred ccceeEeeeeccCCcEEEEEEEEcC--C--eEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCcee
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWYG--S--DVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~~--~--~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~ 578 (782)
+++|++.+.||+|+||.||+|.... . .+++|.++... .....+.+.+|+.++..+ +||||+++++++.....+|
T Consensus 1 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 1 WEDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA-SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred CccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC-CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 4689999999999999999998743 2 36888776322 334456788999999999 7999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc
Q 003978 579 IVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT 643 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~---------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~ 643 (782)
++|||+++++|.+++.... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~--ivH~dlkp~Nill~~~~~ 157 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ--FIHRDLAARNVLVGENLA 157 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCcCCcceEEECCCCe
Confidence 9999999999999996532 24788999999999999999999998 999999999999999999
Q ss_pred EEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccc
Q 003978 644 VKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQ 722 (782)
Q Consensus 644 vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~ 722 (782)
+||+|||++...... ........+..|+|||++.+..++.++|||||||++|+|++ |..||...........+.. ..
T Consensus 158 ~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~-~~ 235 (297)
T cd05089 158 SKIADFGLSRGEEVY-VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-GY 235 (297)
T ss_pred EEECCcCCCccccce-eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhc-CC
Confidence 999999998643221 11122234567999999999889999999999999999997 9999988877666555432 23
Q ss_pred ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 723 RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 723 ~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
....+..++..+.+||.+||..+|.+||++.++++.|.++...+
T Consensus 236 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 236 RMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 44566779999999999999999999999999999999887755
No 137
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1e-37 Score=327.54 Aligned_cols=251 Identities=35% Similarity=0.640 Sum_probs=217.8
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
+..++|++.+.||.|+||.||++...++.||||.++.... ..+.+.+|+.+++.++|+||+++++++......|+||
T Consensus 3 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 79 (256)
T cd05039 3 INSKELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT 79 (256)
T ss_pred cChhhccceeeeecCCCceEEEEEecCcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEE
Confidence 3457899999999999999999999999999999875532 4567889999999999999999999999889999999
Q ss_pred eecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc
Q 003978 582 EFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 660 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 660 (782)
||+++++|.+++.... ..+++..++.++.|++.||.|||.++ |+|+||||+||+++.++.+||+|||.+........
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~--i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~ 157 (256)
T cd05039 80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN--FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD 157 (256)
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccchhcccceEEEeCCCCEEEcccccccccccccc
Confidence 9999999999997543 35899999999999999999999998 99999999999999999999999999876533221
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHH
Q 003978 661 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVE 739 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~ 739 (782)
...++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+.. ......+..+++.+.++|.
T Consensus 158 ---~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~ 233 (256)
T cd05039 158 ---SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEK-GYRMEAPEGCPPEVYKVMK 233 (256)
T ss_pred ---cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc-CCCCCCccCCCHHHHHHHH
Confidence 2344668999999988889999999999999999997 9999988877665554432 2244566778999999999
Q ss_pred HhhhhCCCCCCCHHHHHHHHHH
Q 003978 740 SCWHSDPQCRPSFQELVDKLRD 761 (782)
Q Consensus 740 ~cL~~dP~~RPs~~ell~~L~~ 761 (782)
+||..+|++||++.++++.|+.
T Consensus 234 ~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 234 DCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred HHhccChhhCcCHHHHHHHHhc
Confidence 9999999999999999998865
No 138
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.2e-38 Score=350.52 Aligned_cols=255 Identities=22% Similarity=0.339 Sum_probs=205.8
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc----CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY----GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~----~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
....+|++++.||.|+||.||++... +..|++|.+.... ...+|+++|+.++|||||++++++.....+
T Consensus 89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~-------~~~~E~~il~~l~h~~iv~~~~~~~~~~~~ 161 (392)
T PHA03207 89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK-------TPGREIDILKTISHRAIINLIHAYRWKSTV 161 (392)
T ss_pred hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc-------cHHHHHHHHHhcCCCCccceeeeEeeCCEE
Confidence 34568999999999999999999764 3568999875432 345799999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|++||++ +++|.+++.. ...+++..++.++.||+.||.|||+++ ||||||||+||||+.++.+||+|||+++....
T Consensus 162 ~lv~e~~-~~~l~~~l~~-~~~l~~~~~~~i~~ql~~aL~~LH~~g--ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~ 237 (392)
T PHA03207 162 CMVMPKY-KCDLFTYVDR-SGPLPLEQAITIQRRLLEALAYLHGRG--IIHRDVKTENIFLDEPENAVLGDFGAACKLDA 237 (392)
T ss_pred EEEehhc-CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEcCCCCEEEccCccccccCc
Confidence 9999999 4689998844 457899999999999999999999998 99999999999999999999999999875443
Q ss_pred ccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH---HHHHHhhc-cc----------
Q 003978 658 TYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM---QVIGAVGF-MN---------- 721 (782)
Q Consensus 658 ~~~--~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~---~~~~~i~~-~~---------- 721 (782)
... ......||+.|+|||++.+..++.++|||||||++|+|++|..||...... ..+..+.. ..
T Consensus 238 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~ 317 (392)
T PHA03207 238 HPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNG 317 (392)
T ss_pred ccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCcc
Confidence 221 223457999999999999999999999999999999999999999654321 11111100 00
Q ss_pred ----------------cccCCC-----CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 722 ----------------QRLEIP-----KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 722 ----------------~~~~~p-----~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
....++ ..++.++++||.+||..||++||++.++ |.|+||+.....
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~------l~~p~f~~~~~~ 384 (392)
T PHA03207 318 STNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDI------LSLPLFTKEPIN 384 (392)
T ss_pred chhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHH------hhCchhhccchh
Confidence 000111 1346789999999999999999999999 778999876543
No 139
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1e-37 Score=327.09 Aligned_cols=249 Identities=27% Similarity=0.447 Sum_probs=211.9
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec-CCceeEEEe
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS-PQRLCIVTE 582 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-~~~~~lv~E 582 (782)
.|++.+.||.|++|.||++.. .++.|++|.+............+.+|+++++.++|+||+++++.+.. +..+|++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 489999999999999999987 45679999997766555566778899999999999999999998764 446899999
Q ss_pred ecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 583 FLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 583 ~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
|+++++|.+++... ...+++..++.++.+++.||.|||+.+ |+|+||||+||+++.++.++|+|||++.........
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~--i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~ 158 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH--ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDM 158 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCchhEEEecCCcEEEecccceEEecccCCc
Confidence 99999999999763 345899999999999999999999998 999999999999999999999999998765443333
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHh
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 741 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~c 741 (782)
.....|++.|+|||++.+..++.++|||||||++|+|++|..||...+.......+.. ......+..+++.+.+||.+|
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~ 237 (257)
T cd08223 159 ASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIE-GKLPPMPKDYSPELGELIATM 237 (257)
T ss_pred cccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh-cCCCCCccccCHHHHHHHHHH
Confidence 3455689999999999999899999999999999999999999987766554443321 223345667899999999999
Q ss_pred hhhCCCCCCCHHHHHH
Q 003978 742 WHSDPQCRPSFQELVD 757 (782)
Q Consensus 742 L~~dP~~RPs~~ell~ 757 (782)
|..||++||++.++++
T Consensus 238 l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 238 LSKRPEKRPSVKSILR 253 (257)
T ss_pred hccCcccCCCHHHHhc
Confidence 9999999999999943
No 140
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=8.7e-38 Score=329.05 Aligned_cols=255 Identities=32% Similarity=0.577 Sum_probs=215.8
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEE-cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVW-YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~-~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
|++..++|+++++||+|+||.||+|.. .++.||+|.+....... ..+.+|+.+++.++|+||+++++++. ....|
T Consensus 1 ~~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~---~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~ 76 (260)
T cd05067 1 WEVPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSP---EAFLAEANLMKQLQHPRLVRLYAVVT-QEPIY 76 (260)
T ss_pred CccchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcH---HHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcE
Confidence 466778999999999999999999987 45779999987654432 46788999999999999999999874 45789
Q ss_pred EEEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 579 IVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
++|||+.+++|.+++... ...+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~--i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05067 77 IITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN--YIHRDLRAANILVSETLCCKIADFGLARLIED 154 (260)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC--eecccccHHhEEEcCCCCEEEccCcceeecCC
Confidence 999999999999998653 346888999999999999999999998 99999999999999999999999999876542
Q ss_pred cc-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHH
Q 003978 658 TY-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWA 735 (782)
Q Consensus 658 ~~-~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~ 735 (782)
.. .......++..|+|||++.+..++.++|||||||++|+|++ |++||...+.......+.. ......+..++.++.
T Consensus 155 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 233 (260)
T cd05067 155 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLER-GYRMPRPDNCPEELY 233 (260)
T ss_pred CCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHc-CCCCCCCCCCCHHHH
Confidence 22 12223346778999999998889999999999999999999 9999988877666555432 234456677889999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKLRD 761 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L~~ 761 (782)
++|.+||..+|++||++++++..|+.
T Consensus 234 ~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 234 ELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHHHHHccCChhhCCCHHHHHHHhhc
Confidence 99999999999999999999998875
No 141
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=3.9e-38 Score=335.86 Aligned_cols=253 Identities=21% Similarity=0.344 Sum_probs=204.1
Q ss_pred eccCCcEEEEEEEE--cCCeEEEEEEeccCCCH-HHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCCCCH
Q 003978 513 IGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSL 589 (782)
Q Consensus 513 IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ggsL 589 (782)
||+|+||.||++.. .++.||+|.+....... .....+..|+++++.++||||++++++++.+..+|+||||++|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 79999999999987 47789999987543322 2234456799999999999999999999999999999999999999
Q ss_pred HHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCCCC
Q 003978 590 FRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGT 668 (782)
Q Consensus 590 ~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt 668 (782)
.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.++|+|||++....... ......|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-~~~~~~~~ 157 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD--IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-TITQRAGT 157 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC--EEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-eeeccCCC
Confidence 9888543 345888999999999999999999998 9999999999999999999999999987654332 22234689
Q ss_pred CcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhc--cccccC-CCCCCCHHHHHHHHHhhhhC
Q 003978 669 PQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGF--MNQRLE-IPKDVDPRWAAIVESCWHSD 745 (782)
Q Consensus 669 ~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~--~~~~~~-~p~~~~~~l~~LI~~cL~~d 745 (782)
+.|+|||++.+..++.++|||||||++|+|++|..||...........+.. ...... ....++.++++||.+||..|
T Consensus 158 ~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~ 237 (277)
T cd05607 158 NGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKK 237 (277)
T ss_pred CCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccC
Confidence 999999999998899999999999999999999999976533211111110 111111 22468999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 746 PQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 746 P~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
|++||++.++++.+ +.|+||+..
T Consensus 238 P~~R~~~~~~~~~~--~~h~~f~~~ 260 (277)
T cd05607 238 PEDRLGSREKNDDP--RKHEFFKTI 260 (277)
T ss_pred HhhCCCCccchhhh--hcChhhcCC
Confidence 99999997765443 468999764
No 142
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=9.2e-38 Score=328.10 Aligned_cols=251 Identities=33% Similarity=0.612 Sum_probs=213.9
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeee-ecCCceeEE
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAV-TSPQRLCIV 580 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~-~~~~~~~lv 580 (782)
+..++|++.+.||+|+||.||++...+..+++|.++... ..+.+.+|+.+++.++|+||+++++++ ..++..|++
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv 78 (256)
T cd05082 3 LNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 78 (256)
T ss_pred ccHHhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCCc----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEE
Confidence 445789999999999999999999999999999986432 245688899999999999999999975 455678999
Q ss_pred EeecCCCCHHHHHhhcCC-cchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 581 TEFLPRGSLFRLLQRNTT-KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~-~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
|||+++++|.+++..... .+++..++.++.|++.||+|||+++ |+|+||||+||+++.++.+||+|||++.......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~ 156 (256)
T cd05082 79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 156 (256)
T ss_pred EECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeccccchheEEEcCCCcEEecCCccceeccccC
Confidence 999999999999976443 4788999999999999999999998 9999999999999999999999999987543322
Q ss_pred ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHH
Q 003978 660 LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 738 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI 738 (782)
....++..|+|||++.+..++.++|||||||++|+|++ |+.||...........+.. ......+..+++.+.++|
T Consensus 157 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li 232 (256)
T cd05082 157 ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-GYKMDAPDGCPPVVYDVM 232 (256)
T ss_pred ---CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc-CCCCCCCCCCCHHHHHHH
Confidence 23345678999999999889999999999999999997 9999987776665555532 234456678899999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 739 ESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 739 ~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
.+||..+|++|||+.++++.|+++
T Consensus 233 ~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 233 KQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred HHHhcCChhhCcCHHHHHHHHhcC
Confidence 999999999999999999988753
No 143
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5e-38 Score=348.53 Aligned_cols=254 Identities=27% Similarity=0.343 Sum_probs=207.5
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC------
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP------ 574 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------ 574 (782)
..++|++.+.||+|+||.||++.+ .++.||||++............+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 357899999999999999999987 467799999976554455567788899999999999999999987543
Q ss_pred CceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 575 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 575 ~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
..+|+||||++ ++|.+++.. .+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 175 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLART 175 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhhCC--eecCCCCHHHEEECCCCcEEEEeCCCccc
Confidence 35799999995 478887753 4788889999999999999999998 99999999999999999999999999976
Q ss_pred cccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc------------
Q 003978 655 KHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ------------ 722 (782)
Q Consensus 655 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~------------ 722 (782)
..... ......||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+.....
T Consensus 176 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (364)
T cd07875 176 AGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 254 (364)
T ss_pred cCCCC-cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhH
Confidence 54432 22345789999999999999999999999999999999999999987766544333211000
Q ss_pred --------cc--------------------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 723 --------RL--------------------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 723 --------~~--------------------~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
.+ ......+..+++||.+||..||.+|||+.++ |+|+||+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~------L~hp~~~~ 323 (364)
T cd07875 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA------LQHPYINV 323 (364)
T ss_pred HHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHH------hcCccccc
Confidence 00 0111234678999999999999999999999 67888864
No 144
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=4.3e-38 Score=339.28 Aligned_cols=257 Identities=23% Similarity=0.346 Sum_probs=210.8
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
.++|++.++||.|+||.||++.+ .+..||+|.++..... .....+.+|+.+++.++||||+++++++..++.+|+||
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 46899999999999999999987 4677999998654322 22345678999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
||+. ++|.+++......+++..+..++.||+.||.|||+++ |+|+||||+|||++.++.+||+|||++.........
T Consensus 84 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 160 (301)
T cd07873 84 EYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRK--VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 160 (301)
T ss_pred eccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCc
Confidence 9996 5999998776667899999999999999999999998 999999999999999999999999998765433333
Q ss_pred ccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-----------------c
Q 003978 662 TKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-----------------R 723 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~-----------------~ 723 (782)
.....+++.|+|||++.+. .++.++|||||||++|+|++|.+||...+.......+..... .
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (301)
T cd07873 161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKS 240 (301)
T ss_pred ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccc
Confidence 3344678999999998764 478899999999999999999999987765443322211000 0
Q ss_pred c-----------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 724 L-----------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 724 ~-----------~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
. .....+++.+++||.+||..||.+|||+.++ ++|+||++-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~ei------l~h~~f~~~ 292 (301)
T cd07873 241 YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEA------MKHPYFHCL 292 (301)
T ss_pred cccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHH------hcCcccccc
Confidence 0 1123578899999999999999999999999 678998653
No 145
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=8.4e-38 Score=372.53 Aligned_cols=266 Identities=24% Similarity=0.397 Sum_probs=215.2
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec--C
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS--P 574 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~ 574 (782)
..+....+|+++++||.|+||.||+|.+. +..||+|++............+..|+.+|+.|.|||||+++++|.. .
T Consensus 7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~ 86 (1021)
T PTZ00266 7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKAN 86 (1021)
T ss_pred CCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCC
Confidence 34566789999999999999999999984 5569999998766666667788999999999999999999998854 4
Q ss_pred CceeEEEeecCCCCHHHHHhhc---CCcchHHHHHHHHHHHHHHHHhhhcCC-----CCeeecCCCCCcEEEcC------
Q 003978 575 QRLCIVTEFLPRGSLFRLLQRN---TTKLDWRRRILMALDIARGVSYLHHCN-----PPIIHRDLKSSNLLVDK------ 640 (782)
Q Consensus 575 ~~~~lv~E~~~ggsL~~~l~~~---~~~l~~~~~~~i~~qll~aL~~LH~~~-----~~ivHrDIKp~NILl~~------ 640 (782)
..+|||||||++++|.++|... ...+++..++.|+.||+.||.|||..+ .+||||||||+||||+.
T Consensus 87 ~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg 166 (1021)
T PTZ00266 87 QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIG 166 (1021)
T ss_pred CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccc
Confidence 5689999999999999999652 346899999999999999999999843 34999999999999964
Q ss_pred -----------CCcEEEEecCCCcccccccccccCCCCCCcccCcccccC--CCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 003978 641 -----------HWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRN--EPSDEKSDVYSFGVILWELATEKIPWDN 707 (782)
Q Consensus 641 -----------~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~s~~sDIwSLG~ll~elltG~~Pf~~ 707 (782)
.+.+||+|||++........ .....||+.|+|||++.+ ..++.++|||||||+||+|++|..||..
T Consensus 167 ~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~-~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~ 245 (1021)
T PTZ00266 167 KITAQANNLNGRPIAKIGDFGLSKNIGIESM-AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK 245 (1021)
T ss_pred cccccccccCCCCceEEccCCcccccccccc-ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 23589999999976543322 234579999999999864 4578899999999999999999999987
Q ss_pred CChHHHHHHhhccccccCCC-CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 708 LNSMQVIGAVGFMNQRLEIP-KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 708 ~~~~~~~~~i~~~~~~~~~p-~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
.+....+.... ...+.++ ...+.++.+||.+||..+|.+||++.++| .++|++.....
T Consensus 246 ~~~~~qli~~l--k~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL------~h~~ik~i~~p 304 (1021)
T PTZ00266 246 ANNFSQLISEL--KRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCL------GYQIIKNVGPP 304 (1021)
T ss_pred CCcHHHHHHHH--hcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHh------ccHHHhhcCCC
Confidence 66544332221 1122222 45789999999999999999999999994 56888755443
No 146
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=9e-38 Score=335.12 Aligned_cols=258 Identities=29% Similarity=0.484 Sum_probs=216.6
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
.+.|+++++||.|+||.||++... +..+++|++... .....+.+.+|+.+++.++||||+++++.+..++.+|+||
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 88 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMI 88 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEE
Confidence 367999999999999999999874 577999998653 3455677888999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
||+++++|..++......+++..++.++.|++.+|.|||+++ |+|+||||+||+++.++.+||+|||++.........
T Consensus 89 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 166 (292)
T cd06644 89 EFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMK--IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQR 166 (292)
T ss_pred ecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCC--eeecCCCcceEEEcCCCCEEEccCccceeccccccc
Confidence 999999999888765667899999999999999999999998 999999999999999999999999998754433333
Q ss_pred ccCCCCCCcccCccccc-----CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-cccCCCCCCCHHHH
Q 003978 662 TKTGKGTPQWMAPEVLR-----NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN-QRLEIPKDVDPRWA 735 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~-----~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~-~~~~~p~~~~~~l~ 735 (782)
.....+++.|+|||++. ...++.++|||||||++|+|++|..||...+.......+.... .....+..++.++.
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (292)
T cd06644 167 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFR 246 (292)
T ss_pred cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHH
Confidence 33456889999999985 3446789999999999999999999998776655444432211 12334567889999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
+||.+||..||++||++.++ +.|+||+...
T Consensus 247 ~li~~~l~~~p~~Rp~~~~i------l~~~~~~~~~ 276 (292)
T cd06644 247 DFLKTALDKHPETRPSAAQL------LEHPFVSSVT 276 (292)
T ss_pred HHHHHHhcCCcccCcCHHHH------hcCccccccc
Confidence 99999999999999999999 5678886544
No 147
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=4e-38 Score=347.93 Aligned_cols=253 Identities=28% Similarity=0.356 Sum_probs=206.0
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC------
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP------ 574 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------ 574 (782)
..++|++.+.||+|+||.||++.+ .++.||||++............+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 457999999999999999999986 467899999976655555567788899999999999999999988643
Q ss_pred CceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 575 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 575 ~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
...|+||||+++ +|.+.+.. .+++..+..++.|++.||.|||++| |+||||||+||||+.++.+||+|||+++.
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDikp~Nill~~~~~~kl~Dfg~~~~ 168 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLART 168 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHHEEECCCCCEEEeeCccccc
Confidence 347999999955 77777753 4788889999999999999999998 99999999999999999999999999976
Q ss_pred cccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-------------
Q 003978 655 KHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN------------- 721 (782)
Q Consensus 655 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~------------- 721 (782)
..... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.......+....
T Consensus 169 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (355)
T cd07874 169 AGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 247 (355)
T ss_pred CCCcc-ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcH
Confidence 54432 2234578999999999999999999999999999999999999998766443322110000
Q ss_pred -------c--------------------ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003978 722 -------Q--------------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 768 (782)
Q Consensus 722 -------~--------------------~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~ 768 (782)
. ....+...+.++++||.+||..||++|||+.++ |+|+||+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~el------l~hp~~~ 315 (355)
T cd07874 248 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEA------LQHPYIN 315 (355)
T ss_pred HHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHH------hcCcchh
Confidence 0 000112245678999999999999999999999 5678875
No 148
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-39 Score=356.49 Aligned_cols=250 Identities=31% Similarity=0.509 Sum_probs=218.8
Q ss_pred eeeccCCcEEEEEEEEcCC--eEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCCCC
Q 003978 511 EQIGQGSCGTVYHAVWYGS--DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGS 588 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~~~~--~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ggs 588 (782)
-+||+|+||+||-|++... ..|||.+.... ....+-+..||.+-+.|+|.|||+++|.+..++.+-|.||-++||+
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekd--sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKD--SREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeeccccc--chhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 3799999999999998555 46888775433 3445778999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCcc--hHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc-CCCcEEEEecCCCcccccccccccCC
Q 003978 589 LFRLLQRNTTKL--DWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD-KHWTVKVGDFGLSRLKHETYLTTKTG 665 (782)
Q Consensus 589 L~~~l~~~~~~l--~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~-~~~~vkL~DFGla~~~~~~~~~~~~~ 665 (782)
|.++|...=+++ ++.+.-++.+||++||.|||++. |||||||-+||||+ -.|.+||.|||.++........+.++
T Consensus 659 LSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~--IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETF 736 (1226)
T KOG4279|consen 659 LSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENK--IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETF 736 (1226)
T ss_pred HHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcc--eeeccccCCcEEEeeccceEEecccccchhhccCCcccccc
Confidence 999998765566 88899999999999999999998 99999999999997 47899999999998776666677889
Q ss_pred CCCCcccCcccccCC--CCCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhhccccccCCCCCCCHHHHHHHHHhh
Q 003978 666 KGTPQWMAPEVLRNE--PSDEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAVGFMNQRLEIPKDVDPRWAAIVESCW 742 (782)
Q Consensus 666 ~Gt~~y~aPE~l~~~--~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL 742 (782)
.||..|||||++... .|+.++|||||||++.||.||++||..+... ..+.++......+++|..++.+++.||.+|+
T Consensus 737 TGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcF 816 (1226)
T KOG4279|consen 737 TGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCF 816 (1226)
T ss_pred ccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHc
Confidence 999999999999754 4788999999999999999999999877654 4556677777789999999999999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 743 HSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 743 ~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
..||..||++.++ |.++|.+-.
T Consensus 817 epd~~~R~sA~~L------L~DpFlq~~ 838 (1226)
T KOG4279|consen 817 EPDPCDRPSAKDL------LQDPFLQHN 838 (1226)
T ss_pred CCCcccCccHHHh------ccCcccccC
Confidence 9999999999999 567776433
No 149
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.2e-37 Score=329.42 Aligned_cols=253 Identities=31% Similarity=0.536 Sum_probs=213.9
Q ss_pred eeEeeeeccCCcEEEEEEEEc-----CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc-----
Q 003978 507 LTIGEQIGQGSCGTVYHAVWY-----GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR----- 576 (782)
Q Consensus 507 y~i~~~IG~G~~G~Vy~~~~~-----~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~----- 576 (782)
|++++.||+|+||.||+|... +..||||.++...........+.+|+.+++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 578899999999999999863 2569999998766555666788999999999999999999998765543
Q ss_pred -eeEEEeecCCCCHHHHHhhc-----CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecC
Q 003978 577 -LCIVTEFLPRGSLFRLLQRN-----TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFG 650 (782)
Q Consensus 577 -~~lv~E~~~ggsL~~~l~~~-----~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFG 650 (782)
.+++|||+++++|..++... ...+++..++.++.|++.||.|||+.+ |+|+||||+||++++++.+||+|||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~dfg 158 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN--FIHRDLAARNCMLREDMTVCVADFG 158 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC--eeccccchheEEECCCCeEEECCcc
Confidence 79999999999999998432 235889999999999999999999988 9999999999999999999999999
Q ss_pred CCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCC
Q 003978 651 LSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIP 727 (782)
Q Consensus 651 la~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p 727 (782)
+++...... .......++..|++||.+.+..++.++|||||||++|||++ |..||......+....+.. ......+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~ 237 (273)
T cd05035 159 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRH-GNRLKQP 237 (273)
T ss_pred ceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCCCC
Confidence 987543321 11222335678999999998889999999999999999999 9999988877766655532 3345567
Q ss_pred CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 728 KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 728 ~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
..++.++.++|.+||..||.+||++.++++.|.++
T Consensus 238 ~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 238 EDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred cCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 78999999999999999999999999999998876
No 150
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.4e-37 Score=329.22 Aligned_cols=253 Identities=30% Similarity=0.505 Sum_probs=210.2
Q ss_pred eeEeeeeccCCcEEEEEEEEcCC----eEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC------Cc
Q 003978 507 LTIGEQIGQGSCGTVYHAVWYGS----DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP------QR 576 (782)
Q Consensus 507 y~i~~~IG~G~~G~Vy~~~~~~~----~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------~~ 576 (782)
|.++++||+|+||.||+|..... .+|+|.++...........+..|+++++.++||||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 35678999999999999987432 589999876655566678889999999999999999999976432 24
Q ss_pred eeEEEeecCCCCHHHHHhh-----cCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCC
Q 003978 577 LCIVTEFLPRGSLFRLLQR-----NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGL 651 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~-----~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGl 651 (782)
.+++|||+.+++|.+++.. ....+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS--FIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhheEEcCCCCEEECCCCc
Confidence 6899999999999988742 2344789999999999999999999988 99999999999999999999999999
Q ss_pred Ccccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCC
Q 003978 652 SRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPK 728 (782)
Q Consensus 652 a~~~~~~~~--~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~ 728 (782)
++....... ......+++.|++||.+.+..++.++|||||||++|+|++ |..||...........+.. ......+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~ 237 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQ-GNRLKQPP 237 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-CCCCCCCC
Confidence 886543221 1223346788999999999989999999999999999999 8999988776665554432 23345567
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 729 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 729 ~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
.++..+.++|.+||..||++|||+.++++.|+++
T Consensus 238 ~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 238 DCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 7899999999999999999999999999998875
No 151
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=9.3e-38 Score=328.30 Aligned_cols=250 Identities=34% Similarity=0.610 Sum_probs=212.4
Q ss_pred ccceeEeeeeccCCcEEEEEEEEcC-CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWYG-SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~~-~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
..+|++.+.||+|+||.||++.+.+ ..+|+|++....... ..+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSE---DDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTE 79 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCH---HHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEe
Confidence 3578899999999999999998754 469999986544332 356779999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
|+++++|.+++......+++..++.++.||+.||+|||+.+ |+|+||||+||+++.++.+||+|||+++.........
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~ 157 (256)
T cd05059 80 YMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNG--FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTS 157 (256)
T ss_pred cCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--cccccccHhhEEECCCCcEEECCcccceecccccccc
Confidence 99999999999776667899999999999999999999998 9999999999999999999999999987654322111
Q ss_pred -cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHH
Q 003978 663 -KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVES 740 (782)
Q Consensus 663 -~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~ 740 (782)
....++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+. .......+..++.++.+++.+
T Consensus 158 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~ 236 (256)
T cd05059 158 SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVS-AGYRLYRPKLAPTEVYTIMYS 236 (256)
T ss_pred cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH-cCCcCCCCCCCCHHHHHHHHH
Confidence 11223457999999999889999999999999999999 899998877666555543 233455667789999999999
Q ss_pred hhhhCCCCCCCHHHHHHHH
Q 003978 741 CWHSDPQCRPSFQELVDKL 759 (782)
Q Consensus 741 cL~~dP~~RPs~~ell~~L 759 (782)
||..+|++|||+.++++.|
T Consensus 237 cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 237 CWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HhcCChhhCcCHHHHHHHh
Confidence 9999999999999998875
No 152
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1e-37 Score=326.71 Aligned_cols=246 Identities=32% Similarity=0.559 Sum_probs=208.0
Q ss_pred eeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCCCC
Q 003978 511 EQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGS 588 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ggs 588 (782)
+.||+|+||.||++.. .++.||+|.+... ...+....+.+|+++++.++||||+++++++.....+|+||||+.+++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 79 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCcc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence 4699999999999987 5778999987643 344556778899999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc--cCCC
Q 003978 589 LFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT--KTGK 666 (782)
Q Consensus 589 L~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~--~~~~ 666 (782)
|.+++......+++..++.++.|++.||.|||+++ |+|+||||+|||++.++.+||+|||++.......... ....
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 157 (252)
T cd05084 80 FLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKH--CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQ 157 (252)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccchheEEEcCCCcEEECccccCcccccccccccCCCCC
Confidence 99999766667899999999999999999999998 9999999999999999999999999987543321111 1112
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhC
Q 003978 667 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSD 745 (782)
Q Consensus 667 Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~d 745 (782)
++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+.. ......+..++..+.+||.+||..+
T Consensus 158 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~ 236 (252)
T cd05084 158 IPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQ-GVRLPCPELCPDAVYRLMERCWEYD 236 (252)
T ss_pred CceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHc-CCCCCCcccCCHHHHHHHHHHcCCC
Confidence 3457999999998889999999999999999997 9999987776655544432 2344566778999999999999999
Q ss_pred CCCCCCHHHHHHHHH
Q 003978 746 PQCRPSFQELVDKLR 760 (782)
Q Consensus 746 P~~RPs~~ell~~L~ 760 (782)
|++|||+.++++.|+
T Consensus 237 p~~Rps~~~~~~~l~ 251 (252)
T cd05084 237 PGQRPSFSTVHQELQ 251 (252)
T ss_pred hhhCcCHHHHHHHHh
Confidence 999999999988775
No 153
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-38 Score=372.60 Aligned_cols=263 Identities=31% Similarity=0.594 Sum_probs=229.2
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc---CC----eEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY---GS----DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP 574 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~---~~----~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~ 574 (782)
......++...||+|.||.||.|.+. +. .||||.+++.. +......|.+|..+|+.++|||||+++|++...
T Consensus 689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~-~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~ 767 (1025)
T KOG1095|consen 689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS-SEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS 767 (1025)
T ss_pred CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC
Confidence 33567889999999999999999874 22 27888776543 456678899999999999999999999999999
Q ss_pred CceeEEEeecCCCCHHHHHhhc------CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEe
Q 003978 575 QRLCIVTEFLPRGSLFRLLQRN------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGD 648 (782)
Q Consensus 575 ~~~~lv~E~~~ggsL~~~l~~~------~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~D 648 (782)
...+|++|||.||+|..+|+.. ...+.....+.++.||++|+.||++++ +|||||-..|+||+....|||+|
T Consensus 768 ~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~--fvHRDLAaRNCLL~~~r~VKIaD 845 (1025)
T KOG1095|consen 768 GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH--FVHRDLAARNCLLDERRVVKIAD 845 (1025)
T ss_pred CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC--CcCcchhhhheeecccCcEEEcc
Confidence 9999999999999999999887 667899999999999999999999988 99999999999999999999999
Q ss_pred cCCCcc-cccccccccCC-CCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccC
Q 003978 649 FGLSRL-KHETYLTTKTG-KGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLE 725 (782)
Q Consensus 649 FGla~~-~~~~~~~~~~~-~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~ 725 (782)
||+|+. ....+...... .-...|||||.+....++.|+|||||||+|||+|+ |..||...+..+++..+. ...++.
T Consensus 846 FGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~-~ggRL~ 924 (1025)
T KOG1095|consen 846 FGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVL-EGGRLD 924 (1025)
T ss_pred cchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHH-hCCccC
Confidence 999993 33333333222 34569999999999999999999999999999999 999999999999887554 344999
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003978 726 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 768 (782)
Q Consensus 726 ~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~ 768 (782)
.|..||..+.++|.+||+.+|++||++..|++.+..+......
T Consensus 925 ~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~ 967 (1025)
T KOG1095|consen 925 PPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALG 967 (1025)
T ss_pred CCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhcc
Confidence 9999999999999999999999999999999988888765543
No 154
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.4e-37 Score=327.10 Aligned_cols=245 Identities=27% Similarity=0.518 Sum_probs=208.4
Q ss_pred eeccCCcEEEEEEEE----cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCCC
Q 003978 512 QIGQGSCGTVYHAVW----YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRG 587 (782)
Q Consensus 512 ~IG~G~~G~Vy~~~~----~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg 587 (782)
+||+|+||.||+|.+ .+..+|+|+++...........+..|+.+++.++||||+++++++. ....++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999975 3567999998766555566778899999999999999999999875 45678999999999
Q ss_pred CHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc---cccC
Q 003978 588 SLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL---TTKT 664 (782)
Q Consensus 588 sL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~---~~~~ 664 (782)
+|.+++... ..+++..++.++.|++.||.|||+++ |+|+||||.||+++.++.+||+|||++........ ....
T Consensus 81 ~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05116 81 PLNKFLQKN-KHVTEKNITELVHQVSMGMKYLEETN--FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTH 157 (257)
T ss_pred cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCC
Confidence 999999754 46899999999999999999999998 99999999999999999999999999876543221 1122
Q ss_pred CCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhh
Q 003978 665 GKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWH 743 (782)
Q Consensus 665 ~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~ 743 (782)
..+++.|+|||.+.+..++.++|||||||++|||++ |..||...........+.. ......|..+++++.+||.+||.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~-~~~~~~~~~~~~~l~~li~~~~~ 236 (257)
T cd05116 158 GKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIES-GERMECPQRCPPEMYDLMKLCWT 236 (257)
T ss_pred CCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHC-CCCCCCCCCCCHHHHHHHHHHhc
Confidence 344679999999988888999999999999999998 9999998877666655543 23456778899999999999999
Q ss_pred hCCCCCCCHHHHHHHHHH
Q 003978 744 SDPQCRPSFQELVDKLRD 761 (782)
Q Consensus 744 ~dP~~RPs~~ell~~L~~ 761 (782)
.||++||++.+|.+.|++
T Consensus 237 ~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 237 YGVDERPGFAVVELRLRN 254 (257)
T ss_pred cCchhCcCHHHHHHHHhc
Confidence 999999999999888764
No 155
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1e-37 Score=334.48 Aligned_cols=261 Identities=31% Similarity=0.597 Sum_probs=220.2
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEcC-------CeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeee
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYG-------SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGA 570 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~-------~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~ 570 (782)
.++...++|++.+.||+|+||.||++...+ ..+|+|.+.... .......+.+|+.+++.+ +|+||++++++
T Consensus 6 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 84 (293)
T cd05053 6 EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGV 84 (293)
T ss_pred ccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence 345566789999999999999999998643 458999987543 334456788999999999 79999999999
Q ss_pred eecCCceeEEEeecCCCCHHHHHhhc---------------CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCc
Q 003978 571 VTSPQRLCIVTEFLPRGSLFRLLQRN---------------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSN 635 (782)
Q Consensus 571 ~~~~~~~~lv~E~~~ggsL~~~l~~~---------------~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~N 635 (782)
+..++.++++|||+.+++|..++... ...+++..++.++.|++.||.|||+.+ |+|+||||+|
T Consensus 85 ~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~--ivH~dlkp~N 162 (293)
T cd05053 85 CTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK--CIHRDLAARN 162 (293)
T ss_pred EcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC--ccccccceee
Confidence 99999999999999999999999642 345889999999999999999999988 9999999999
Q ss_pred EEEcCCCcEEEEecCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHH
Q 003978 636 LLVDKHWTVKVGDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQ 712 (782)
Q Consensus 636 ILl~~~~~vkL~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~ 712 (782)
|+++.++.+||+|||+++....... ......++..|+|||++.+..++.++|||||||++|+|++ |..||......+
T Consensus 163 il~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 242 (293)
T cd05053 163 VLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 242 (293)
T ss_pred EEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH
Confidence 9999999999999999976543221 1222345678999999999889999999999999999997 999998887766
Q ss_pred HHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003978 713 VIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 763 (782)
Q Consensus 713 ~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~ 763 (782)
....+. .......+..++..+.+||.+||..||++|||+.++++.|+++.
T Consensus 243 ~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 243 LFKLLK-EGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHHHH-cCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 655543 23344566778999999999999999999999999999998874
No 156
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.4e-37 Score=326.29 Aligned_cols=249 Identities=25% Similarity=0.435 Sum_probs=213.9
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
+|++.++||.|+||.||++.. .+..+|+|.++.... ....+.+..|+.+++.++||||+++++.+...+.+|++|||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS-SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY 79 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc-hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence 588999999999999999987 467799999875442 33456788899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 584 LPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 584 ~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
+++++|.+++... ...+++..++.++.||+.||.|||+++ |+|+||||+||+++.++.++|+|||++..........
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 157 (255)
T cd08219 80 CDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR--VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYA 157 (255)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCcceEEECCCCcEEEcccCcceeeccccccc
Confidence 9999999988653 345789999999999999999999998 9999999999999999999999999987655433333
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhh
Q 003978 663 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCW 742 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL 742 (782)
....|++.|+|||++.+..++.++|+||||+++|+|++|..||...+.......+. ......++..++..+.+||.+||
T Consensus 158 ~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l 236 (255)
T cd08219 158 CTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVC-QGSYKPLPSHYSYELRSLIKQMF 236 (255)
T ss_pred ccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHh-cCCCCCCCcccCHHHHHHHHHHH
Confidence 34568999999999999889999999999999999999999998877665554443 22334466778999999999999
Q ss_pred hhCCCCCCCHHHHHHH
Q 003978 743 HSDPQCRPSFQELVDK 758 (782)
Q Consensus 743 ~~dP~~RPs~~ell~~ 758 (782)
..||++||++.+++..
T Consensus 237 ~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 237 KRNPRSRPSATTILSR 252 (255)
T ss_pred hCCcccCCCHHHHhhc
Confidence 9999999999999753
No 157
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=4.1e-38 Score=336.39 Aligned_cols=252 Identities=28% Similarity=0.345 Sum_probs=200.5
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC---CCCceeEEeeeeec-----CC
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL---RHPNVLLFMGAVTS-----PQ 575 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l---~HpnIv~l~~~~~~-----~~ 575 (782)
+|++.+.||+|+||.||+|.+ .++.||+|+++...........+.+|+.+++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 588999999999999999987 467799999876443322223445677766655 79999999998764 24
Q ss_pred ceeEEEeecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
.++++|||+. ++|.+++.... ..+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.+||+|||++..
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dikp~Nili~~~~~~kl~dfg~~~~ 157 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSGGQVKLADFGLARI 157 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEECccCcccc
Confidence 5799999996 48988886543 35899999999999999999999998 99999999999999999999999999876
Q ss_pred cccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc---c--------
Q 003978 655 KHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ---R-------- 723 (782)
Q Consensus 655 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~---~-------- 723 (782)
..... ......||+.|+|||++.+..++.++|||||||++|+|++|.+||...........+..... .
T Consensus 158 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07863 158 YSCQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVT 236 (288)
T ss_pred ccCcc-cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccc
Confidence 54322 22234689999999999998899999999999999999999999987766544433321100 0
Q ss_pred --------------cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 724 --------------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 724 --------------~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
....+.++..+.+||.+||..||++|||+.++ +.|+||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~------l~hp~f 288 (288)
T cd07863 237 LPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRA------LQHPFF 288 (288)
T ss_pred ccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHH------hcCCCC
Confidence 01123567889999999999999999999999 456765
No 158
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.2e-37 Score=349.62 Aligned_cols=263 Identities=29% Similarity=0.486 Sum_probs=218.9
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEcC-------CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEee
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYG-------SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMG 569 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~-------~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~ 569 (782)
..|++..++|.++++||+|+||.||+|++.+ ..||||+++.... ....+.+.+|+++|..+. |||||++++
T Consensus 30 ~~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~~H~niv~~~~ 108 (401)
T cd05107 30 SAWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR-SSEKQALMSELKIMSHLGPHLNIVNLLG 108 (401)
T ss_pred CcceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC-hhHHHHHHHHHHHHHhcCCCCCeEEEEE
Confidence 3477788899999999999999999998643 4699999975433 334457889999999997 999999999
Q ss_pred eeecCCceeEEEeecCCCCHHHHHhhcC----------------------------------------------------
Q 003978 570 AVTSPQRLCIVTEFLPRGSLFRLLQRNT---------------------------------------------------- 597 (782)
Q Consensus 570 ~~~~~~~~~lv~E~~~ggsL~~~l~~~~---------------------------------------------------- 597 (782)
++.....+++|||||.+|+|.+++..+.
T Consensus 109 ~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (401)
T cd05107 109 ACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESAD 188 (401)
T ss_pred EEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccC
Confidence 9999999999999999999999996532
Q ss_pred ---------------------------------------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCC
Q 003978 598 ---------------------------------------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLK 632 (782)
Q Consensus 598 ---------------------------------------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIK 632 (782)
..+++..++.++.||+.||.|||+.+ |+|||||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrdlk 266 (401)
T cd05107 189 YVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN--CVHRDLA 266 (401)
T ss_pred ccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC--cCcccCC
Confidence 13566778889999999999999988 9999999
Q ss_pred CCcEEEcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCC
Q 003978 633 SSNLLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLN 709 (782)
Q Consensus 633 p~NILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~ 709 (782)
|+|||++.++.+||+|||+++...... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||....
T Consensus 267 p~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~ 346 (401)
T cd05107 267 ARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELP 346 (401)
T ss_pred cceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 999999999999999999997543221 11223357889999999998889999999999999999998 899998766
Q ss_pred hHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003978 710 SMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 763 (782)
Q Consensus 710 ~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~ 763 (782)
.............++..|..++.++.+||.+||..+|.+||++.+|++.|+++.
T Consensus 347 ~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 347 MNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred chHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 555443332233345567788999999999999999999999999999998764
No 159
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-39 Score=317.58 Aligned_cols=261 Identities=23% Similarity=0.339 Sum_probs=211.6
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC---
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ--- 575 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~--- 575 (782)
.+..++|++.+.||+|+|+-||++.. .+..||+|.+.... .+..+...+|++..++++||||++++++...+.
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~ 94 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDG 94 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccC
Confidence 35567999999999999999999985 66779999987655 345678889999999999999999999875443
Q ss_pred --ceeEEEeecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecC
Q 003978 576 --RLCIVTEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFG 650 (782)
Q Consensus 576 --~~~lv~E~~~ggsL~~~l~~---~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFG 650 (782)
..||+++|...|+|.+.+.. .+..+++.++++++.+|++||.+||+..++++||||||.|||+++.+.++|.|||
T Consensus 95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~G 174 (302)
T KOG2345|consen 95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLG 174 (302)
T ss_pred ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEecc
Confidence 38999999999999999854 3456899999999999999999999998889999999999999999999999999
Q ss_pred CCcccccccc---------cccCCCCCCcccCcccccC---CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhh
Q 003978 651 LSRLKHETYL---------TTKTGKGTPQWMAPEVLRN---EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVG 718 (782)
Q Consensus 651 la~~~~~~~~---------~~~~~~Gt~~y~aPE~l~~---~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~ 718 (782)
.++....... .......|..|+|||++.- ...+.++|||||||+||.|+.|..||...-....--.+.
T Consensus 175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLA 254 (302)
T KOG2345|consen 175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALA 254 (302)
T ss_pred CccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEe
Confidence 8865432111 1122357999999999864 445889999999999999999999996432211101112
Q ss_pred ccccccCCC--CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003978 719 FMNQRLEIP--KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 763 (782)
Q Consensus 719 ~~~~~~~~p--~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~ 763 (782)
..+..+.+| ..++..+.+||++||+.||.+||++.+++..+++|.
T Consensus 255 v~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 255 VQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred eeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 223333333 348899999999999999999999999999998874
No 160
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2e-38 Score=353.47 Aligned_cols=250 Identities=27% Similarity=0.358 Sum_probs=209.2
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-C-----CceeEEeeeeecCC
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-H-----PNVLLFMGAVTSPQ 575 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-H-----pnIv~l~~~~~~~~ 575 (782)
.-+|.+.+.||+|+||.|.+|.+ +++.||||+++... ........|+.+|..|+ | -|||+++++|...+
T Consensus 185 ~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k---~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~ 261 (586)
T KOG0667|consen 185 AYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK---RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN 261 (586)
T ss_pred EEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh---HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc
Confidence 34899999999999999999997 46779999997654 44556677999999996 4 38999999999999
Q ss_pred ceeEEEeecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC--CCcEEEEecCCC
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK--HWTVKVGDFGLS 652 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~--~~~vkL~DFGla 652 (782)
++|||+|++ ..+|+++|+.+. ..++...++.|+.||+.||.+||+.+ |||+|||||||||.. ...|||+|||.|
T Consensus 262 HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~--IIHcDLKPENILL~~~~r~~vKVIDFGSS 338 (586)
T KOG0667|consen 262 HLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG--IIHCDLKPENILLKDPKRSRIKVIDFGSS 338 (586)
T ss_pred ceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCChhheeeccCCcCceeEEecccc
Confidence 999999999 669999998653 45899999999999999999999998 999999999999964 347999999999
Q ss_pred cccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc--------
Q 003978 653 RLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL-------- 724 (782)
Q Consensus 653 ~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~-------- 724 (782)
+....... +.+.+..|+|||++.|.+|+.+.|||||||+++||++|.+-|.+.+..+.+..|....+.+
T Consensus 339 c~~~q~vy---tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~ 415 (586)
T KOG0667|consen 339 CFESQRVY---TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTA 415 (586)
T ss_pred cccCCcce---eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 87765433 5567999999999999999999999999999999999999999888776665542111000
Q ss_pred ------------------------------------------CCCC-----------CCCHHHHHHHHHhhhhCCCCCCC
Q 003978 725 ------------------------------------------EIPK-----------DVDPRWAAIVESCWHSDPQCRPS 751 (782)
Q Consensus 725 ------------------------------------------~~p~-----------~~~~~l~~LI~~cL~~dP~~RPs 751 (782)
..|. .-...+.+||++||..||.+|+|
T Consensus 416 ~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~t 495 (586)
T KOG0667|consen 416 KKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERIT 495 (586)
T ss_pred cccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCC
Confidence 0110 11235789999999999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 003978 752 FQELVDKLRDLQRQYFQ 768 (782)
Q Consensus 752 ~~ell~~L~~L~~~~~~ 768 (782)
+.+. |+|+|+.
T Consensus 496 p~qa------l~Hpfl~ 506 (586)
T KOG0667|consen 496 PAQA------LNHPFLT 506 (586)
T ss_pred HHHH------hcCcccc
Confidence 9998 7889986
No 161
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.3e-37 Score=325.82 Aligned_cols=246 Identities=35% Similarity=0.626 Sum_probs=215.1
Q ss_pred eeeccCCcEEEEEEEEc-----CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecC
Q 003978 511 EQIGQGSCGTVYHAVWY-----GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLP 585 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~~-----~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ 585 (782)
++||+|+||.||++... +..|++|+++...... ....+.+|+++++.++|+||+++++++.....++++|||++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEecc
Confidence 46999999999999885 6679999987654433 46788899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhc--------CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 586 RGSLFRLLQRN--------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 586 ggsL~~~l~~~--------~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
+++|.+++... ...+++..++.++.|++.||+|||+++ |+|+||||+||+++.++.+||+|||++.....
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK--FVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC--cccCccCcceEEECCCCcEEEccccccccccc
Confidence 99999999875 467899999999999999999999988 99999999999999999999999999976554
Q ss_pred cc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHH
Q 003978 658 TY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 734 (782)
Q Consensus 658 ~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l 734 (782)
.. .......+++.|+|||.+.+..++.++|||||||++|+|++ |..||......+....+.. ......+..++.++
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 236 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK-GYRLPKPEYCPDEL 236 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-CCCCCCCccCChHH
Confidence 32 22334567899999999998889999999999999999999 6999998877776666643 44556778889999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003978 735 AAIVESCWHSDPQCRPSFQELVDKLR 760 (782)
Q Consensus 735 ~~LI~~cL~~dP~~RPs~~ell~~L~ 760 (782)
.++|.+||..+|++|||+.++++.|+
T Consensus 237 ~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 237 YELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHHHHHccCCcccCcCHHHHHHhhC
Confidence 99999999999999999999988763
No 162
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=7.9e-38 Score=330.19 Aligned_cols=257 Identities=24% Similarity=0.413 Sum_probs=214.6
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
.+|++.+.||.|+||.||++.. .+..++||.+..... .......+.+|+.+++.+.||||+++++.+..++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 5788999999999999999986 577899998865433 3345567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 582 EFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 582 E~~~ggsL~~~l~~---~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
||+++++|.+++.. ....+++..++.++.||+.||.|||+++ ++|+||||+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCCEEECcchhhhccccC
Confidence 99999999998864 2345889999999999999999999998 999999999999999999999999998765443
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH--HHHHHhhccccccCCCCCCCHHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM--QVIGAVGFMNQRLEIPKDVDPRWAA 736 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~--~~~~~i~~~~~~~~~p~~~~~~l~~ 736 (782)
........|++.|+|||.+.+..++.++||||||+++|+|++|..||...... .....+.........+..++..+++
T Consensus 160 ~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (267)
T cd08229 160 TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQ 239 (267)
T ss_pred CcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHH
Confidence 33333456899999999999888999999999999999999999999754332 2222222222222233458899999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003978 737 IVESCWHSDPQCRPSFQELVDKLRDLQ 763 (782)
Q Consensus 737 LI~~cL~~dP~~RPs~~ell~~L~~L~ 763 (782)
||.+||..||++|||+.++++.+.+++
T Consensus 240 li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 240 LVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred HHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 999999999999999999999998874
No 163
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2.3e-37 Score=332.03 Aligned_cols=257 Identities=32% Similarity=0.531 Sum_probs=216.6
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc-------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY-------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~-------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
...+|.+.+.||+|+||.||++... ...+++|.+.... ......+.+|+.+++.++||||+++++++....
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (291)
T cd05094 3 KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT--LAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 80 (291)
T ss_pred chHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc--HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC
Confidence 3467999999999999999999753 2347888875432 333467889999999999999999999999999
Q ss_pred ceeEEEeecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK 640 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~---------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~ 640 (782)
..++||||+++++|.+++.... ..+++..++.++.||+.||+|||+++ |+|+||||+|||++.
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~Nil~~~ 158 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH--FVHRDLATRNCLVGA 158 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccCcceEEEcc
Confidence 9999999999999999996532 34788999999999999999999998 999999999999999
Q ss_pred CCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHh
Q 003978 641 HWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAV 717 (782)
Q Consensus 641 ~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i 717 (782)
++.++|+|||++....... .......+++.|+|||.+.+..++.++|||||||++|+|++ |..||...+.......+
T Consensus 159 ~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~ 238 (291)
T cd05094 159 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI 238 (291)
T ss_pred CCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 9999999999987543321 11223456889999999999999999999999999999998 99999888776665554
Q ss_pred hccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 718 GFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 718 ~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
. .......+..++..+.+||.+||..||++||++.++++.|+++..
T Consensus 239 ~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 239 T-QGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred h-CCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 3 233344566789999999999999999999999999999999865
No 164
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.9e-37 Score=328.04 Aligned_cols=255 Identities=32% Similarity=0.543 Sum_probs=215.6
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc--C---CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY--G---SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~--~---~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
..+|++.+.||+|+||.||+|... + ..+|+|.++... .......+.+|+.+++.++||||+++++++..++..|
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM 81 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 357899999999999999999863 2 258999886543 3445678889999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
+||||+++++|.+++......+++..++.++.|++.||.|||+++ ++|+||||+|||++.++.++|+|||++......
T Consensus 82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd05066 82 IVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 159 (267)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence 999999999999999876667899999999999999999999998 999999999999999999999999998765432
Q ss_pred cc---cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHH
Q 003978 659 YL---TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 734 (782)
Q Consensus 659 ~~---~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l 734 (782)
.. ......++..|++||.+.+..++.++|+|||||++|++++ |..||......+....+... .....+..+++.+
T Consensus 160 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 238 (267)
T cd05066 160 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEG-YRLPAPMDCPAAL 238 (267)
T ss_pred cceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCC-CcCCCCCCCCHHH
Confidence 21 1112234568999999998889999999999999999886 99999887766555554322 2344556789999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 735 AAIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 735 ~~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
.+++.+||..+|.+||++.++++.|+++
T Consensus 239 ~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 239 HQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 9999999999999999999999998875
No 165
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=3.3e-37 Score=330.27 Aligned_cols=257 Identities=30% Similarity=0.538 Sum_probs=217.1
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc-------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY-------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~-------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
.+.+|.+.+.||+|+||.||++... +..+|+|.+... .......+.+|+.+++.++||||+++++++...+
T Consensus 3 ~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (288)
T cd05093 3 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD 80 (288)
T ss_pred chHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence 4568999999999999999999752 234888887543 2445567889999999999999999999999999
Q ss_pred ceeEEEeecCCCCHHHHHhhcC------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNT------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT 643 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~ 643 (782)
.++++|||+++++|.+++.... ..+++..++.++.||+.||+|||+++ ++||||||+|||++.++.
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~--i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCLVGENLL 158 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccCcceEEEccCCc
Confidence 9999999999999999996432 24899999999999999999999998 999999999999999999
Q ss_pred EEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcc
Q 003978 644 VKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFM 720 (782)
Q Consensus 644 vkL~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~ 720 (782)
+||+|||++....... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||...........+..
T Consensus 159 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~- 237 (288)
T cd05093 159 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ- 237 (288)
T ss_pred EEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-
Confidence 9999999987543221 11223345788999999999989999999999999999998 9999988877666555532
Q ss_pred ccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 721 NQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 721 ~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
......+..++.++.+|+.+||..||.+|||+.++++.|+++.+
T Consensus 238 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 238 GRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred CCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 22344566789999999999999999999999999999988865
No 166
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.6e-37 Score=335.62 Aligned_cols=265 Identities=29% Similarity=0.560 Sum_probs=216.9
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc--CCe--EEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCce
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY--GSD--VAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~--vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 577 (782)
.+++|++.+.||+|+||.||+|.+. +.. +++|.++.. ........+.+|+.++..+ +||||+++++++...+.+
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~ 83 (303)
T cd05088 5 EWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 83 (303)
T ss_pred chhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc-CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCc
Confidence 4578999999999999999999874 333 566665432 2344556788899999999 899999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC
Q 003978 578 CIVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW 642 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~---------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~ 642 (782)
|+||||+++++|.+++.... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g--i~H~dlkp~Nili~~~~ 161 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGENY 161 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC--ccccccchheEEecCCC
Confidence 99999999999999996532 24788999999999999999999998 99999999999999999
Q ss_pred cEEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccc
Q 003978 643 TVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMN 721 (782)
Q Consensus 643 ~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~ 721 (782)
.+||+|||++...... .......++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+....+. ..
T Consensus 162 ~~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~-~~ 239 (303)
T cd05088 162 VAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP-QG 239 (303)
T ss_pred cEEeCccccCcccchh-hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHh-cC
Confidence 9999999998643221 11222344678999999988889999999999999999998 999998777666554442 22
Q ss_pred cccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 722 QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 722 ~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
.....+..+++++.+||.+||..+|++||++.+++..|.++...-....+.
T Consensus 240 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~~~~~~ 290 (303)
T cd05088 240 YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNT 290 (303)
T ss_pred CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhhhhhhh
Confidence 234455668899999999999999999999999999998886655444443
No 167
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.7e-37 Score=325.58 Aligned_cols=256 Identities=25% Similarity=0.447 Sum_probs=214.8
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
++|++.+.||+|+||.||+|.. .++.||+|.++.... .......+.+|+++++.++|+||+++++.+...+..+++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 5799999999999999999988 478899999875433 3344678889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 582 EFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 582 E~~~ggsL~~~l~~---~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
||+++++|..++.. ....+++..++.++.+++.||.|||+.+ |+|+||||+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 159 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR--IMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC--EecCCcChhhEEECCCCcEEEeccceeeeccCC
Confidence 99999999999864 2345889999999999999999999998 999999999999999999999999998755433
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh--HHHHHHhhccccccCCCC-CCCHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS--MQVIGAVGFMNQRLEIPK-DVDPRWA 735 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~--~~~~~~i~~~~~~~~~p~-~~~~~l~ 735 (782)
........|++.|+|||.+.+..++.++|||||||++|+|++|..||..... ......+.. ......+. .++..+.
T Consensus 160 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 238 (267)
T cd08224 160 TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEK-CDYPPLPADHYSEELR 238 (267)
T ss_pred CcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhc-CCCCCCChhhcCHHHH
Confidence 2223345688999999999998899999999999999999999999965432 222222221 12223333 6888999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKLRDLQ 763 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L~~L~ 763 (782)
++|.+||..+|++||++.++++.|+.++
T Consensus 239 ~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 239 DLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred HHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 9999999999999999999999998774
No 168
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2e-37 Score=334.48 Aligned_cols=262 Identities=29% Similarity=0.577 Sum_probs=220.4
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEc---------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEe
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWY---------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFM 568 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~---------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~ 568 (782)
.|++...+|.+.+.||+|+||.||++.+. +..||+|++.... .......+.+|+.+++.+ +||||++++
T Consensus 9 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~ 87 (304)
T cd05101 9 RWEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLL 87 (304)
T ss_pred cccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc-chHHHHHHHHHHHHHHhhccCCCchhee
Confidence 45667789999999999999999999752 2358999886432 334457788999999999 899999999
Q ss_pred eeeecCCceeEEEeecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 003978 569 GAVTSPQRLCIVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKS 633 (782)
Q Consensus 569 ~~~~~~~~~~lv~E~~~ggsL~~~l~~~~---------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp 633 (782)
+++......|++|||+.+++|.+++.... ..+++..++.++.||+.||.|||++| |+|+||||
T Consensus 88 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g--ivH~dlkp 165 (304)
T cd05101 88 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK--CIHRDLAA 165 (304)
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC--eeeccccc
Confidence 99999999999999999999999997532 24678889999999999999999998 99999999
Q ss_pred CcEEEcCCCcEEEEecCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 003978 634 SNLLVDKHWTVKVGDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNS 710 (782)
Q Consensus 634 ~NILl~~~~~vkL~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~ 710 (782)
+||+++.++.+||+|||+++....... ......+++.|+|||++.+..++.++|||||||++|+|++ |..||.....
T Consensus 166 ~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 245 (304)
T cd05101 166 RNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 245 (304)
T ss_pred ceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH
Confidence 999999999999999999976543221 2223456788999999999889999999999999999998 8999988777
Q ss_pred HHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 711 MQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 711 ~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
......+. .......+..++.++.+||.+||..+|.+||++.++++.|+++..
T Consensus 246 ~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 246 EELFKLLK-EGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred HHHHHHHH-cCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 66655553 233445667889999999999999999999999999999988754
No 169
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.1e-37 Score=334.00 Aligned_cols=255 Identities=22% Similarity=0.334 Sum_probs=211.2
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCC-HHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
.|++.+.||+|+||.||++.+ .++.||||.+...... ......+..|+.+++.++|+||+.+++.+...+.+|+|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 377889999999999999987 4678999998765433 2334567789999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 583 FLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 583 ~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
|+.+++|.+++... ...+++..++.++.|++.||.|||+++ |+|+||||+||+++.++.++|+|||++....... .
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~ 157 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER--IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-T 157 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHEEECCCCCEEEeeccceeecCCCc-c
Confidence 99999999988543 345899999999999999999999988 9999999999999999999999999987543322 2
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHH---HHHhhccccccCCCCCCCHHHHHHH
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQV---IGAVGFMNQRLEIPKDVDPRWAAIV 738 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~---~~~i~~~~~~~~~p~~~~~~l~~LI 738 (782)
.....|++.|+|||++.+..++.++|||||||++|+|++|..||........ ...+. .......+..+++++.+||
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li 236 (285)
T cd05630 158 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV-KEVQEEYSEKFSPDARSLC 236 (285)
T ss_pred ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhh-hhhhhhcCccCCHHHHHHH
Confidence 2244789999999999999999999999999999999999999986543211 11111 1112345667899999999
Q ss_pred HHhhhhCCCCCCC-----HHHHHHHHHHHHHHHhhcc
Q 003978 739 ESCWHSDPQCRPS-----FQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 739 ~~cL~~dP~~RPs-----~~ell~~L~~L~~~~~~~~ 770 (782)
.+||..||++||| +.++ +.|+||+..
T Consensus 237 ~~~l~~~p~~R~s~~~~~~~~~------~~h~~~~~~ 267 (285)
T cd05630 237 KMLLCKDPKERLGCQGGGAREV------KEHPLFKQI 267 (285)
T ss_pred HHHhhcCHHHccCCCCCchHHH------HcChhhhcc
Confidence 9999999999999 8888 577888754
No 170
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.2e-37 Score=329.65 Aligned_cols=258 Identities=31% Similarity=0.558 Sum_probs=215.6
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCC----eEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGS----DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~----~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
..+|++.++||+|+||.||+|.+ .+. .||+|+++... .......+.+|+.+++.+.||||+++++++.. ...
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~ 83 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT-SPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STV 83 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC-CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCc
Confidence 46899999999999999999986 333 48999986543 34445678899999999999999999999875 457
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
+++|||+++|+|.+++......+++..++.++.||+.||.|||+++ |+||||||+|||+++++.+||+|||+++....
T Consensus 84 ~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~ 161 (279)
T cd05109 84 QLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVR--LVHRDLAARNVLVKSPNHVKITDFGLARLLDI 161 (279)
T ss_pred EEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccccceEEEcCCCcEEECCCCceeeccc
Confidence 8999999999999999876667899999999999999999999998 99999999999999999999999999876543
Q ss_pred cccc--ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHH
Q 003978 658 TYLT--TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 734 (782)
Q Consensus 658 ~~~~--~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l 734 (782)
.... .....+++.|++||.+.+..++.++|||||||++|||++ |..||...........+. .......+..++.++
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 240 (279)
T cd05109 162 DETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLE-KGERLPQPPICTIDV 240 (279)
T ss_pred ccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-CCCcCCCCccCCHHH
Confidence 2211 122345678999999999889999999999999999998 999998776655544443 233445566789999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 735 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 735 ~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
.++|.+||..||++||++.++++.|.++...+
T Consensus 241 ~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 241 YMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 99999999999999999999999888775543
No 171
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=2.8e-37 Score=327.05 Aligned_cols=259 Identities=35% Similarity=0.621 Sum_probs=218.0
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEcC-----CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG-----SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~~-----~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
++..++|.+.++||+|+||.||+|.+.. ..|+||.+.... .....+.+.+|+.+++.+.||||+++++++.. .
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~ 79 (270)
T cd05056 2 EIQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT-SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-N 79 (270)
T ss_pred eechhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-C
Confidence 4456789999999999999999998643 258899875433 24456788899999999999999999998875 5
Q ss_pred ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
..|+||||+++++|.+++......+++..++.++.||+.||.|||+++ ++|+||||+||+++.++.++|+|||++...
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 80 PVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKR--FVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred CcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccChheEEEecCCCeEEccCceeeec
Confidence 678999999999999999876667899999999999999999999998 999999999999999999999999998754
Q ss_pred ccccc-cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHH
Q 003978 656 HETYL-TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPR 733 (782)
Q Consensus 656 ~~~~~-~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~ 733 (782)
..... ......+++.|+|||.+.+..++.++|||||||++|+|++ |..||...........+. .......+..++..
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 236 (270)
T cd05056 158 EDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPPT 236 (270)
T ss_pred ccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH-cCCcCCCCCCCCHH
Confidence 43321 1122334578999999988889999999999999999986 999998887766554443 23345667789999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 734 WAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 734 l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
+.++|.+||..+|.+|||+.++++.|.++..
T Consensus 237 ~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 237 LYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999999999998764
No 172
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=2.2e-37 Score=331.82 Aligned_cols=255 Identities=30% Similarity=0.572 Sum_probs=214.2
Q ss_pred ceeEeeeeccCCcEEEEEEEEcC-------CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVWYG-------SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~~~-------~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
+|++.+.||+|+||.||+|.... ..+++|++.... .......+.+|+.+++.+.||||+++++.+...+..+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA-SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLL 79 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC-CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcE
Confidence 47889999999999999998642 348888876543 2334567889999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhc-----------------------CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCc
Q 003978 579 IVTEFLPRGSLFRLLQRN-----------------------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSN 635 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~-----------------------~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~N 635 (782)
++|||+.+++|.+++... ...+++..++.++.|++.||.|||+++ |+|+||||+|
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--ivH~dikp~n 157 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK--LVHRDLAARN 157 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC--eehhhhhhhe
Confidence 999999999999998642 134788899999999999999999988 9999999999
Q ss_pred EEEcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHH
Q 003978 636 LLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQ 712 (782)
Q Consensus 636 ILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~ 712 (782)
||+++++.+||+|||+++...... .......++..|+|||.+.+..++.++|||||||++|+|++ |..||.......
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~ 237 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER 237 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 999999999999999987543221 12223346778999999998889999999999999999998 999998877666
Q ss_pred HHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 713 VIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 713 ~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
....+. .......+..++.++.+||.+||..+|.+||++.++++.|+++.+
T Consensus 238 ~~~~~~-~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 238 LFNLLK-TGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HHHHHh-CCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 554443 223445567789999999999999999999999999999998764
No 173
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-38 Score=346.88 Aligned_cols=262 Identities=33% Similarity=0.602 Sum_probs=233.1
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEc----CC--eEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeee
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWY----GS--DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAV 571 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~----~~--~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~ 571 (782)
.+|++..+..++.++||.|.||.||+|.+. |. .||||.++.+.. .+..+.|..|.-+|+.++|||||+++|++
T Consensus 382 rnyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t-~d~tekflqEa~iMrnfdHphIikLIGv~ 460 (974)
T KOG4257|consen 382 RNYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCT-PDDTEKFLQEASIMRNFDHPHIIKLIGVC 460 (974)
T ss_pred CcceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCC-hhhHHHHHHHHHHHHhCCCcchhheeeee
Confidence 467778888899999999999999999983 33 388998876544 33478899999999999999999999999
Q ss_pred ecCCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCC
Q 003978 572 TSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGL 651 (782)
Q Consensus 572 ~~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGl 651 (782)
.. ...|||||+++.|.|..+|+.+...++......++.||+.||+|||+.+ +|||||-..||||.....|||+|||+
T Consensus 461 ~e-~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkr--fVHRDIAaRNiLVsSp~CVKLaDFGL 537 (974)
T KOG4257|consen 461 VE-QPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKR--FVHRDIAARNILVSSPQCVKLADFGL 537 (974)
T ss_pred ec-cceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhc--hhhhhhhhhheeecCcceeeecccch
Confidence 75 5789999999999999999999999999999999999999999999988 99999999999999999999999999
Q ss_pred Ccccccc-cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCC
Q 003978 652 SRLKHET-YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKD 729 (782)
Q Consensus 652 a~~~~~~-~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~ 729 (782)
+++..+. +.......-...|||||.+.-..++.++|||-||++|||++. |..||.+....+++..+. .+.+++.|++
T Consensus 538 SR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iE-nGeRlP~P~n 616 (974)
T KOG4257|consen 538 SRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIE-NGERLPCPPN 616 (974)
T ss_pred hhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEec-CCCCCCCCCC
Confidence 9986554 444444555779999999999999999999999999999876 999999998888776664 4568889999
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 730 VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 730 ~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
||+.++.|+.+||.++|.+||.+.++...|.++.+
T Consensus 617 CPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 617 CPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred CChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988866
No 174
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=7.5e-38 Score=333.23 Aligned_cols=257 Identities=30% Similarity=0.489 Sum_probs=219.0
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
.++|++.+.||.|+||.||++.. .+..+|+|++... .......+..|+++++.++||||+++++.+..+..+|+||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILI 81 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEe
Confidence 35799999999999999999987 4677999998643 3445577889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
||+++++|.+++......+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++.........
T Consensus 82 e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 159 (280)
T cd06611 82 EFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHK--VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQK 159 (280)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEECCCCCEEEccCccchhhcccccc
Confidence 999999999999876667999999999999999999999998 999999999999999999999999998765443333
Q ss_pred ccCCCCCCcccCccccc-----CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-cccCCCCCCCHHHH
Q 003978 662 TKTGKGTPQWMAPEVLR-----NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN-QRLEIPKDVDPRWA 735 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~-----~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~-~~~~~p~~~~~~l~ 735 (782)
.....|++.|++||++. +..++.++|||||||++|+|++|..||...+.......+.... .....+..++.++.
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (280)
T cd06611 160 RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFN 239 (280)
T ss_pred cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHH
Confidence 34456899999999975 3446779999999999999999999998887666554443221 12334567899999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
+||.+||..+|.+||++.++ ++|+||+..
T Consensus 240 ~li~~~l~~~p~~Rps~~~i------l~~~~~~~~ 268 (280)
T cd06611 240 DFLKSCLVKDPDDRPTAAEL------LKHPFVSDQ 268 (280)
T ss_pred HHHHHHhccChhhCcCHHHH------hcChhhccc
Confidence 99999999999999999999 678998765
No 175
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.8e-37 Score=326.23 Aligned_cols=255 Identities=34% Similarity=0.597 Sum_probs=212.5
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEcC-CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG-SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~~-~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
++..++|++.++||+|+||.||++.+.+ ..||||+++...... ..+.+|+++++.++||||+++++.+.. ...|+
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~---~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~l 77 (262)
T cd05071 2 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 77 (262)
T ss_pred CCChHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCH---HHHHHHHHHHHhCCCCCcceEEEEECC-CCcEE
Confidence 4556789999999999999999998754 469999987544332 467889999999999999999998754 56899
Q ss_pred EEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 580 VTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
||||+++++|.+++... ...+++..++.++.|++.||+|||+.+ |+|+||||+||+++.++.++|+|||++......
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~ 155 (262)
T cd05071 78 VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDN 155 (262)
T ss_pred EEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccCcccEEEcCCCcEEeccCCceeecccc
Confidence 99999999999999753 345788999999999999999999988 999999999999999999999999999765433
Q ss_pred ccc-ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHH
Q 003978 659 YLT-TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 736 (782)
Q Consensus 659 ~~~-~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~ 736 (782)
... .....++..|+|||++.+..++.++|||||||++|+|++ |..||...........+.. ......+..++..+.+
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ 234 (262)
T cd05071 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-GYRMPCPPECPESLHD 234 (262)
T ss_pred ccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhc-CCCCCCccccCHHHHH
Confidence 221 123346778999999988889999999999999999999 8999988776665555432 2233445678999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 737 IVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 737 LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
||.+||+.||.+||++.++++.|+++
T Consensus 235 li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 235 LMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HHHHHccCCcccCCCHHHHHHHHHHh
Confidence 99999999999999999998887653
No 176
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=9.8e-38 Score=332.70 Aligned_cols=248 Identities=28% Similarity=0.353 Sum_probs=202.7
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
+|++.+.||+|+||.||+|.. .+..||||+++...........+.+|+.+++.++||||+++++++..+..+|+||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 588999999999999999987 467899999876543333446678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcC--CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 584 LPRGSLFRLLQRNT--TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 584 ~~ggsL~~~l~~~~--~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
+. ++|.+++.... ..+++..++.++.||+.||.|||+++ |+|+||||+||+++.++.++|+|||++.........
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 157 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR--VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRV 157 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCCHHHEEEcCCCcEEECcccceeecCCCccc
Confidence 96 58988886432 56899999999999999999999998 999999999999999999999999998755433322
Q ss_pred ccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-------------------
Q 003978 662 TKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN------------------- 721 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~------------------- 721 (782)
.....+++.|+|||++.+. .++.++|||||||++|+|++|..||...........+....
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (285)
T cd07861 158 YTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKN 237 (285)
T ss_pred ccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHh
Confidence 3344678999999998764 46889999999999999999999998765433222210000
Q ss_pred --------cccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHH
Q 003978 722 --------QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELV 756 (782)
Q Consensus 722 --------~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell 756 (782)
........+++++.+||.+||..||.+|||+.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll 280 (285)
T cd07861 238 TFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKAL 280 (285)
T ss_pred hccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHh
Confidence 00011235789999999999999999999999994
No 177
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.2e-37 Score=334.85 Aligned_cols=263 Identities=30% Similarity=0.591 Sum_probs=219.8
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEc---------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEe
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWY---------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFM 568 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~---------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~ 568 (782)
.+....++|.++++||+|+||.||++... ...+|+|+++... .......+..|+.+++.+ +||||++++
T Consensus 6 ~~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~ 84 (314)
T cd05099 6 KWEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLISEMELMKLIGKHKNIINLL 84 (314)
T ss_pred cccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCCeeeEE
Confidence 34556679999999999999999999752 2358999887543 344466788899999999 699999999
Q ss_pred eeeecCCceeEEEeecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 003978 569 GAVTSPQRLCIVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKS 633 (782)
Q Consensus 569 ~~~~~~~~~~lv~E~~~ggsL~~~l~~~~---------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp 633 (782)
+++.....+|++|||+.+++|.+++.... ..+++..+..++.||+.||.|||++| |+|+||||
T Consensus 85 ~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g--i~H~dlkp 162 (314)
T cd05099 85 GVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR--CIHRDLAA 162 (314)
T ss_pred EEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC--eeeccccc
Confidence 99998899999999999999999996532 34788899999999999999999998 99999999
Q ss_pred CcEEEcCCCcEEEEecCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 003978 634 SNLLVDKHWTVKVGDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNS 710 (782)
Q Consensus 634 ~NILl~~~~~vkL~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~ 710 (782)
+|||++.++.+||+|||+++....... ......+++.|+|||++.+..++.++|||||||++|+|++ |..||.....
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~ 242 (314)
T cd05099 163 RNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV 242 (314)
T ss_pred eeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999976543211 1122334568999999999889999999999999999999 8999988777
Q ss_pred HHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003978 711 MQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 765 (782)
Q Consensus 711 ~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~ 765 (782)
......+.. ......+..++.++++||.+||..||++||++.++++.|.++...
T Consensus 243 ~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 243 EELFKLLRE-GHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred HHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 666655532 234456778899999999999999999999999999999988653
No 178
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.8e-37 Score=324.89 Aligned_cols=256 Identities=34% Similarity=0.597 Sum_probs=217.1
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEcC-CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYG-SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~-~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
|++..++|++.++||+|+||.||++...+ ..++||.+...... ...+.+|+.+++.++|+||+++++++......+
T Consensus 1 ~~~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05034 1 WEIPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMS---PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIY 77 (261)
T ss_pred CccchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccC---HHHHHHHHHHHhhCCCCCEeeeeeeeecCCceE
Confidence 35667899999999999999999998743 56999998765433 356788999999999999999999999888999
Q ss_pred EEEeecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
++|||+++++|.+++.... ..+++..+..++.||+.||.|||+++ |+|+||||+||+|+.++.+||+|||++.....
T Consensus 78 ~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~--i~h~di~p~nili~~~~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 78 IVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN--YIHRDLAARNILVGENLVCKIADFGLARLIED 155 (261)
T ss_pred EEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcchheEEEcCCCCEEECccccceeccc
Confidence 9999999999999997643 46899999999999999999999998 99999999999999999999999999876543
Q ss_pred cc-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHH
Q 003978 658 TY-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWA 735 (782)
Q Consensus 658 ~~-~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~ 735 (782)
.. .......++..|+|||.+.+..++.++|||||||++|+|++ |+.||...........+.. ......+...+.++.
T Consensus 156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 234 (261)
T cd05034 156 DEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVER-GYRMPRPPNCPEELY 234 (261)
T ss_pred hhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCCCCCCCCHHHH
Confidence 21 11122234678999999999889999999999999999998 9999988777666655532 223455667799999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKLRD 761 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L~~ 761 (782)
+++.+||..+|++||++.++++.|+.
T Consensus 235 ~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 235 DLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHHHHHcccCcccCCCHHHHHHHHhc
Confidence 99999999999999999999988764
No 179
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.4e-37 Score=342.34 Aligned_cols=262 Identities=29% Similarity=0.508 Sum_probs=213.2
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEE-------cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeee
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVW-------YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAV 571 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~-------~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~ 571 (782)
|+...++|++++.||+|+||.||+|.+ .++.||||+++.... ......+.+|+.+|..+ +||||+++++++
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 80 (343)
T cd05103 2 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGAC 80 (343)
T ss_pred cccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC-hHHHHHHHHHHHHHHhccCCccHhhhccee
Confidence 455667999999999999999999974 346799999875443 33456788899999999 689999999987
Q ss_pred ecC-CceeEEEeecCCCCHHHHHhhcC-----------------------------------------------------
Q 003978 572 TSP-QRLCIVTEFLPRGSLFRLLQRNT----------------------------------------------------- 597 (782)
Q Consensus 572 ~~~-~~~~lv~E~~~ggsL~~~l~~~~----------------------------------------------------- 597 (782)
... ..++++||||++|+|.+++....
T Consensus 81 ~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (343)
T cd05103 81 TKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSD 160 (343)
T ss_pred ecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCcccc
Confidence 654 56789999999999999986421
Q ss_pred -------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc--ccc
Q 003978 598 -------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY--LTT 662 (782)
Q Consensus 598 -------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~--~~~ 662 (782)
..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++....... ...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 238 (343)
T cd05103 161 VEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRK 238 (343)
T ss_pred chhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhc
Confidence 23577788899999999999999998 9999999999999999999999999987543221 112
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHh
Q 003978 663 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 741 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~c 741 (782)
....+++.|+|||++.+..++.++|||||||++|+|++ |..||.....................|..+++++.+++.+|
T Consensus 239 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 318 (343)
T cd05103 239 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDC 318 (343)
T ss_pred CCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHH
Confidence 22345678999999999889999999999999999997 99999876543333233223334556677889999999999
Q ss_pred hhhCCCCCCCHHHHHHHHHHHHH
Q 003978 742 WHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 742 L~~dP~~RPs~~ell~~L~~L~~ 764 (782)
|..||++||++.+++++|..+.+
T Consensus 319 l~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 319 WHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred ccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999988754
No 180
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.5e-37 Score=334.05 Aligned_cols=261 Identities=28% Similarity=0.490 Sum_probs=216.9
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEc-------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeee
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWY-------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGA 570 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~-------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~ 570 (782)
.+....++|.+.+.||+|+||.||++... +..||+|+++... .....+.+.+|+.+++.+ +||||++++++
T Consensus 29 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 107 (302)
T cd05055 29 KWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA-HSSEREALMSELKIMSHLGNHENIVNLLGA 107 (302)
T ss_pred cccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC-ChHHHHHHHHHHHHHHhccCCCCcceEEEE
Confidence 44566779999999999999999999752 2358999886543 234456788999999999 79999999999
Q ss_pred eecCCceeEEEeecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEec
Q 003978 571 VTSPQRLCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDF 649 (782)
Q Consensus 571 ~~~~~~~~lv~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DF 649 (782)
+...+.+|++|||+.+++|.+++.... ..+++..++.++.|++.||.|||+++ |+|+||||+|||++.++.++|+||
T Consensus 108 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~~l~df 185 (302)
T cd05055 108 CTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNVLLTHGKIVKICDF 185 (302)
T ss_pred EecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eehhhhccceEEEcCCCeEEECCC
Confidence 999999999999999999999997543 34899999999999999999999998 999999999999999999999999
Q ss_pred CCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCC
Q 003978 650 GLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEI 726 (782)
Q Consensus 650 Gla~~~~~~~~--~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~ 726 (782)
|++........ ......+++.|+|||.+.+..++.++|||||||++|+|++ |..||.....................
T Consensus 186 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~ 265 (302)
T cd05055 186 GLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQ 265 (302)
T ss_pred cccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCC
Confidence 99875433211 1222346788999999999889999999999999999998 99999877655444333222223445
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 727 PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 727 p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
+...++++.+||.+||..+|++||++.++++.|.++
T Consensus 266 ~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 266 PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 567889999999999999999999999999998875
No 181
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1e-37 Score=332.76 Aligned_cols=255 Identities=26% Similarity=0.482 Sum_probs=214.3
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc-------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY-------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~-------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
...+|++.++||+|+||.||+|... +..||||+++... .......+..|+.++..++||||+++++++....
T Consensus 3 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~ 81 (283)
T cd05091 3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ 81 (283)
T ss_pred CHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC
Confidence 3457888999999999999999864 3569999987543 3344567889999999999999999999999999
Q ss_pred ceeEEEeecCCCCHHHHHhhc---------------CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC
Q 003978 576 RLCIVTEFLPRGSLFRLLQRN---------------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK 640 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~---------------~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~ 640 (782)
..++++||+.+++|.+++... ...+++..++.++.|++.||.|||+++ |+||||||+|||+++
T Consensus 82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g--i~H~dlkp~Nil~~~ 159 (283)
T cd05091 82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH--VVHKDLATRNVLVFD 159 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC--ccccccchhheEecC
Confidence 999999999999999998532 134788889999999999999999998 999999999999999
Q ss_pred CCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHh
Q 003978 641 HWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAV 717 (782)
Q Consensus 641 ~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i 717 (782)
++.+||+|||+++...... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||......+....+
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i 239 (283)
T cd05091 160 KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMI 239 (283)
T ss_pred CCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 9999999999987543321 11223456789999999988889999999999999999998 89999888777666555
Q ss_pred hccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003978 718 GFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRD 761 (782)
Q Consensus 718 ~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~ 761 (782)
.. ......+..++..+.+|+.+||+.+|.+||++.+++..|+.
T Consensus 240 ~~-~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 240 RN-RQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred Hc-CCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 42 22345567899999999999999999999999999988763
No 182
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.9e-37 Score=332.39 Aligned_cols=252 Identities=23% Similarity=0.438 Sum_probs=218.6
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
++|++.+.||+|+||.||++.+ .++.||+|+++.... .......+.+|+++++.++||||+++++.+...+.+|+||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 4799999999999999999987 467899999876543 2345577889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
||+++++|.+++... ..+++..+..++.||+.||.|||+.+ |+|+||+|.||+|+.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~--i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~--- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLD--IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR--- 154 (290)
T ss_pred ecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEECCCCCEEEeeCCCccccCCC---
Confidence 999999999999765 46899999999999999999999998 999999999999999999999999998765443
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHh
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 741 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~c 741 (782)
.....|++.|++||.+.+...+.++||||||+++|+|++|..||...........+. .....++..++..++++|.+|
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~ 232 (290)
T cd05580 155 TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKIL--EGKVRFPSFFSPDAKDLIRNL 232 (290)
T ss_pred CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh--cCCccCCccCCHHHHHHHHHH
Confidence 234468999999999988888999999999999999999999998877655554442 445667788899999999999
Q ss_pred hhhCCCCCC-----CHHHHHHHHHHHHHHHhhcc
Q 003978 742 WHSDPQCRP-----SFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 742 L~~dP~~RP-----s~~ell~~L~~L~~~~~~~~ 770 (782)
|..||.+|+ ++.++ +.|+||+..
T Consensus 233 l~~~p~~R~~~~~~~~~~l------~~~~~~~~~ 260 (290)
T cd05580 233 LQVDLTKRLGNLKNGVNDI------KNHPWFAGI 260 (290)
T ss_pred ccCCHHHccCcccCCHHHH------HcCcccccC
Confidence 999999999 78888 456877543
No 183
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.8e-38 Score=347.11 Aligned_cols=246 Identities=26% Similarity=0.422 Sum_probs=202.7
Q ss_pred eccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhC---CCCceeEEeeeeecCCceeEEEeecCC
Q 003978 513 IGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRL---RHPNVLLFMGAVTSPQRLCIVTEFLPR 586 (782)
Q Consensus 513 IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l---~HpnIv~l~~~~~~~~~~~lv~E~~~g 586 (782)
||+|+||.||+|.. .++.||||++.+... .......+..|..++..+ .||||+++++++.....+|+||||+.+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 79999999999987 467899999975433 222334455566776655 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003978 587 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 666 (782)
Q Consensus 587 gsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 666 (782)
++|..++... ..+++..+..++.||+.||+|||+++ |+||||||+||||+.++.+||+|||++..............
T Consensus 81 g~L~~~l~~~-~~~~~~~~~~~~~qil~al~~LH~~~--ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 157 (330)
T cd05586 81 GELFWHLQKE-GRFSEDRAKFYIAELVLALEHLHKYD--IVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFC 157 (330)
T ss_pred ChHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCcc
Confidence 9999998764 46899999999999999999999999 99999999999999999999999999875433333334567
Q ss_pred CCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC-CCCCHHHHHHHHHhhhh
Q 003978 667 GTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP-KDVDPRWAAIVESCWHS 744 (782)
Q Consensus 667 Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p-~~~~~~l~~LI~~cL~~ 744 (782)
||+.|+|||++.+. .++.++|||||||++|+|++|..||...+..+....+... ...++ ..+++++.+||.+||..
T Consensus 158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~li~~~L~~ 235 (330)
T cd05586 158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFG--KVRFPKNVLSDEGRQFVKGLLNR 235 (330)
T ss_pred CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcC--CCCCCCccCCHHHHHHHHHHcCC
Confidence 99999999998764 4789999999999999999999999887776666555332 23333 35799999999999999
Q ss_pred CCCCCC----CHHHHHHHHHHHHHHHhhc
Q 003978 745 DPQCRP----SFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 745 dP~~RP----s~~ell~~L~~L~~~~~~~ 769 (782)
||.+|| ++.++ +.|+||+.
T Consensus 236 ~P~~R~~~~~~~~~l------l~h~~~~~ 258 (330)
T cd05586 236 NPQHRLGAHRDAVEL------KEHPFFAD 258 (330)
T ss_pred CHHHCCCCCCCHHHH------hcCccccC
Confidence 999998 56676 46788754
No 184
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2.4e-37 Score=325.74 Aligned_cols=255 Identities=34% Similarity=0.602 Sum_probs=214.2
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEc-CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVWY-GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~~-~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
|++..++|++.++||+|+||.||++... +..+|+|.+....... ..+.+|+.+++.++|+||+++++++. ....|
T Consensus 1 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~---~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~ 76 (260)
T cd05070 1 WEIPRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSP---ESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIY 76 (260)
T ss_pred CCCchHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCH---HHHHHHHHHHHhcCCCceEEEEeEEC-CCCcE
Confidence 3456678999999999999999999874 4579999987654433 46788999999999999999999875 45689
Q ss_pred EEEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 579 IVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
++|||+.+++|.+++... ...+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++.....
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05070 77 IVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN--YIHRDLRSANILVGDGLVCKIADFGLARLIED 154 (260)
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCccceEEEeCCceEEeCCceeeeeccC
Confidence 999999999999999753 345889999999999999999999998 99999999999999999999999999876543
Q ss_pred ccc-cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHH
Q 003978 658 TYL-TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWA 735 (782)
Q Consensus 658 ~~~-~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~ 735 (782)
... ......++..|+|||.+.+..++.++|||||||++|+|++ |..||...+.......+.. ......+...+..+.
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 233 (260)
T cd05070 155 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER-GYRMPCPQDCPISLH 233 (260)
T ss_pred cccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-CCCCCCCCcCCHHHH
Confidence 221 1122345678999999988889999999999999999999 9999988777666655532 234456677899999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKLRD 761 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L~~ 761 (782)
+||.+||..+|++|||+.++.+.|++
T Consensus 234 ~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 234 ELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHHHHHcccCcccCcCHHHHHHHHhc
Confidence 99999999999999999999887764
No 185
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=7.1e-38 Score=344.19 Aligned_cols=256 Identities=26% Similarity=0.350 Sum_probs=208.0
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC------
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP------ 574 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------ 574 (782)
..++|++++.||.|+||.||+|.. .+..||||++............+.+|+.+|+.++||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 357899999999999999999986 456799999876543334456677899999999999999999987543
Q ss_pred CceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 575 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 575 ~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
..+|++|+++ +++|.+++.. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrdikp~Nil~~~~~~~kl~Dfg~~~~ 167 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKC--QKLSDEHVQFLIYQLLRGLKYIHSAG--IIHRDLKPSNVAVNEDCELRILDFGLARQ 167 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--eecccCChhhEEECCCCCEEEcCCcccee
Confidence 3478999998 7799988864 35899999999999999999999998 99999999999999999999999999976
Q ss_pred cccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-----------
Q 003978 655 KHETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ----------- 722 (782)
Q Consensus 655 ~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~----------- 722 (782)
.... .....||+.|+|||++.+ ..++.++|||||||++|+|++|..||...+.......+.....
T Consensus 168 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (343)
T cd07878 168 ADDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKIS 244 (343)
T ss_pred cCCC---cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcc
Confidence 5432 224578999999999977 5678999999999999999999999987665443332211000
Q ss_pred ----------ccC--------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 723 ----------RLE--------IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 723 ----------~~~--------~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
... .....++.+.+||.+||..||.+|||+.++ |.|+||+....
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~el------l~hp~~~~~~~ 306 (343)
T cd07878 245 SEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEA------LAHPYFSQYHD 306 (343)
T ss_pred hhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHH------hcCcchhccCC
Confidence 000 112356778999999999999999999999 57899976543
No 186
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.1e-37 Score=331.45 Aligned_cols=261 Identities=28% Similarity=0.462 Sum_probs=220.4
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
+.....+|++.+.||.|+||.||++.. .++.|+||.+...... ....+.+|+.+++.++||||+++++++.....+
T Consensus 14 ~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 91 (296)
T cd06655 14 IGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQP--KKELIINEILVMKELKNPNIVNFLDSFLVGDEL 91 (296)
T ss_pred cCCCcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCc--hHHHHHHHHHHHHhcCCCceeeeeeeEecCceE
Confidence 334456899999999999999999986 5778999998754432 245678899999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|+||||+.+++|..++... .+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.+||+|||++.....
T Consensus 92 ~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~~--i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~ 167 (296)
T cd06655 92 FVVMEYLAGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLHANQ--VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITP 167 (296)
T ss_pred EEEEEecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEccCccchhccc
Confidence 9999999999999998753 5899999999999999999999998 99999999999999999999999999875443
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-ccccCCCCCCCHHHHH
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM-NQRLEIPKDVDPRWAA 736 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~-~~~~~~p~~~~~~l~~ 736 (782)
.........|++.|+|||.+.+..++.++|||||||++|+|++|..||...+.......+... ......+..+++.+.+
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (296)
T cd06655 168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRD 247 (296)
T ss_pred ccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHH
Confidence 322223446889999999999888999999999999999999999999887765544333221 1223455678999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 737 IVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 737 LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
||.+||..||.+||++.++ +.++||+..+.
T Consensus 248 li~~~l~~dp~~Rpt~~~i------l~~~~~~~~~~ 277 (296)
T cd06655 248 FLNRCLEMDVEKRGSAKEL------LQHPFLKLAKP 277 (296)
T ss_pred HHHHHhhcChhhCCCHHHH------hhChHhhhccc
Confidence 9999999999999999999 68899987654
No 187
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.5e-37 Score=324.25 Aligned_cols=249 Identities=24% Similarity=0.431 Sum_probs=215.0
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
+|++.+.||+|+||.||++.. .++.|++|.+............+.+|+.+++.++||||+++++++...+..|+||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 589999999999999999987 567899999876555555567888999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 584 LPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 584 ~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
+.+++|.+++... ...+++..++.++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++..........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~ 158 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK--ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELA 158 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhh
Confidence 9999999998654 335788999999999999999999998 9999999999999999999999999987655433333
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhh
Q 003978 663 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCW 742 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL 742 (782)
....|++.|+|||++.+..++.++|+|||||++|+|++|..||...+.......+. .......+..++.++.++|.+||
T Consensus 159 ~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l 237 (256)
T cd08218 159 RTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKII-RGSYPPVSSHYSYDLRNLVSQLF 237 (256)
T ss_pred hhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHh-cCCCCCCcccCCHHHHHHHHHHh
Confidence 34568899999999999888999999999999999999999998776665554442 23344567788999999999999
Q ss_pred hhCCCCCCCHHHHHH
Q 003978 743 HSDPQCRPSFQELVD 757 (782)
Q Consensus 743 ~~dP~~RPs~~ell~ 757 (782)
..+|.+||++.++++
T Consensus 238 ~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 238 KRNPRDRPSVNSILE 252 (256)
T ss_pred hCChhhCcCHHHHhh
Confidence 999999999999943
No 188
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=4.6e-37 Score=327.80 Aligned_cols=256 Identities=26% Similarity=0.484 Sum_probs=212.3
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCC----eEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGS----DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~----~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
..+|++.+.||+|+||.||+|.+ .++ .+++|.+... ........+..|+.++..+.||||+++++++.. ...
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~ 83 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR-SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASL 83 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc-cchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-Ccc
Confidence 35789999999999999999987 344 3677776432 223445677888889999999999999998754 567
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
++++||+++++|.+++......+++..++.++.||+.||.|||+++ ++|+||||+|||++.++.+||+|||+++....
T Consensus 84 ~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 84 QLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHR--MVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred EEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--EeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 8999999999999999876667899999999999999999999988 99999999999999999999999999975432
Q ss_pred cc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHH
Q 003978 658 TY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 734 (782)
Q Consensus 658 ~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l 734 (782)
.. .......++..|++||.+.+..++.++|||||||++|||++ |..||...........+. .......+..++.++
T Consensus 162 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 240 (279)
T cd05111 162 DDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLE-KGERLAQPQICTIDV 240 (279)
T ss_pred CCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-CCCcCCCCCCCCHHH
Confidence 21 12223456778999999998889999999999999999998 999998877655443332 333445566788899
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 735 AAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 735 ~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
.+++.+||..||.+|||+.++++.|..+..
T Consensus 241 ~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 241 YMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred HHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 999999999999999999999999888764
No 189
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9e-39 Score=352.95 Aligned_cols=256 Identities=31% Similarity=0.518 Sum_probs=218.8
Q ss_pred ceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccC--CCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc--eeE
Q 003978 506 DLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQE--YSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR--LCI 579 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~--~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~--~~l 579 (782)
-.+...+||+|+|-+||+|.+. |-.||.-.++... .....+++|..|+.+|+.|+|||||++|+.|.+..+ +.+
T Consensus 41 y~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~ 120 (632)
T KOG0584|consen 41 YLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINF 120 (632)
T ss_pred eeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeee
Confidence 3456678999999999999874 4456654443332 245667999999999999999999999999987665 789
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC-CCcEEEEecCCCcccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-HWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~-~~~vkL~DFGla~~~~~~ 658 (782)
|+|++..|+|..|+++.+ .++.+.+..|++||++||.|||++.++|||||||-+||+|+. .|.|||+|+|+|......
T Consensus 121 iTEL~TSGtLr~Y~kk~~-~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 121 ITELFTSGTLREYRKKHR-RVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred eeecccCCcHHHHHHHhc-cCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence 999999999999998865 689999999999999999999999999999999999999975 589999999999987776
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCC-ChHHHHHHhhccccccCCCCCCCHHHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNL-NSMQVIGAVGFMNQRLEIPKDVDPRWAAI 737 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~-~~~~~~~~i~~~~~~~~~p~~~~~~l~~L 737 (782)
... ..+|||.|||||++. ..|+..+||||||++|+||.|+.+||... +..+.+.++.....+-.+.+.-+++.++|
T Consensus 200 ~ak--svIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~f 276 (632)
T KOG0584|consen 200 HAK--SVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREF 276 (632)
T ss_pred ccc--eeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHH
Confidence 544 368999999999998 77999999999999999999999999765 45566666665555556667779999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 738 VESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 738 I~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
|.+||.. ..+|||+.|| |.++||..-.-
T Consensus 277 IekCl~~-~~~R~sa~eL------L~d~Ff~~d~g 304 (632)
T KOG0584|consen 277 IEKCLAT-KSERLSAKEL------LKDPFFDEDGG 304 (632)
T ss_pred HHHHhcC-chhccCHHHH------hhChhhccccc
Confidence 9999999 9999999999 67899987533
No 190
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=4.6e-37 Score=323.76 Aligned_cols=254 Identities=34% Similarity=0.598 Sum_probs=212.2
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEcC-CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG-SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~~-~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
++..++|.+.++||+|+||.||++...+ ..+|+|.+...... ...+.+|+++++.++||||+++++++. .+..++
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~ 77 (260)
T cd05069 2 EIPRESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMM---PEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYI 77 (260)
T ss_pred cCChHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCcc---HHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEE
Confidence 4455789999999999999999998755 46999987654332 356788999999999999999999875 456899
Q ss_pred EEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 580 VTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
+|||+.+++|.+++... ...+++..+..++.|++.||.|||+.+ |+|+||||+||++++++.++|+|||++......
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05069 78 VTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN--YIHRDLRAANILVGDNLVCKIADFGLARLIEDN 155 (260)
T ss_pred EEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeecccCcceEEEcCCCeEEECCCccceEccCC
Confidence 99999999999999753 334788999999999999999999998 999999999999999999999999999765432
Q ss_pred ccc-ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHH
Q 003978 659 YLT-TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 736 (782)
Q Consensus 659 ~~~-~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~ 736 (782)
... .....++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+.. ......+..++..+.+
T Consensus 156 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 234 (260)
T cd05069 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVER-GYRMPCPQGCPESLHE 234 (260)
T ss_pred cccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCCCCcccCHHHHH
Confidence 211 122345678999999998889999999999999999999 9999988777665555432 2334556778999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHH
Q 003978 737 IVESCWHSDPQCRPSFQELVDKLRD 761 (782)
Q Consensus 737 LI~~cL~~dP~~RPs~~ell~~L~~ 761 (782)
||.+||..||.+||+++++++.|++
T Consensus 235 li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 235 LMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HHHHHccCCcccCcCHHHHHHHHhc
Confidence 9999999999999999999988865
No 191
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=4e-37 Score=324.22 Aligned_cols=246 Identities=26% Similarity=0.535 Sum_probs=206.8
Q ss_pred eeccCCcEEEEEEEEc----CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCCC
Q 003978 512 QIGQGSCGTVYHAVWY----GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRG 587 (782)
Q Consensus 512 ~IG~G~~G~Vy~~~~~----~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg 587 (782)
.||+|+||.||+|.+. +..||+|++.... .....+.+.+|+.+++.++||||+++++++.. ...++||||++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCC
Confidence 4899999999999763 3358999986543 34455678899999999999999999998864 5789999999999
Q ss_pred CHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc---cccC
Q 003978 588 SLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL---TTKT 664 (782)
Q Consensus 588 sL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~---~~~~ 664 (782)
+|.+++......+++..++.++.|++.||.|||+++ ++|+||||+|||++.++.+||+|||++........ ....
T Consensus 80 ~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05115 80 PLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKN--FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSA 157 (257)
T ss_pred CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcC--eeecccchheEEEcCCCcEEeccCCccccccCCccceeccCC
Confidence 999999766667899999999999999999999998 99999999999999999999999999875433211 1112
Q ss_pred CCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhh
Q 003978 665 GKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWH 743 (782)
Q Consensus 665 ~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~ 743 (782)
..+++.|+|||.+.+..++.++|||||||++|+|++ |..||...........+. .......+..+++++.++|.+||.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~c~~ 236 (257)
T cd05115 158 GKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIE-QGKRLDCPAECPPEMYALMKDCWI 236 (257)
T ss_pred CCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHH-CCCCCCCCCCCCHHHHHHHHHHcC
Confidence 234678999999998889999999999999999996 999999887776665553 233456777889999999999999
Q ss_pred hCCCCCCCHHHHHHHHHHH
Q 003978 744 SDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 744 ~dP~~RPs~~ell~~L~~L 762 (782)
.||++||++.++++.|+++
T Consensus 237 ~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 237 YKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CChhhCcCHHHHHHHHhhh
Confidence 9999999999998887653
No 192
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=7.2e-38 Score=333.83 Aligned_cols=253 Identities=25% Similarity=0.334 Sum_probs=204.5
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
+|++.+.||.|+||.||+|.+ .+..|++|.++...........+.+|+.+++.++||||+++++++.....+|+++||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 588999999999999999998 577899999876544333445677899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccccc
Q 003978 584 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTK 663 (782)
Q Consensus 584 ~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 663 (782)
+. ++|.+++......+++..++.++.||+.||.|||+++ |+|+||||+||+++.++.+||+|||++...........
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~--i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 157 (284)
T cd07839 81 CD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHN--VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYS 157 (284)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcC
Confidence 96 5888888765667999999999999999999999998 99999999999999999999999999876544333333
Q ss_pred CCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCC-CChHHHHHHhhccc---------------c---c
Q 003978 664 TGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDN-LNSMQVIGAVGFMN---------------Q---R 723 (782)
Q Consensus 664 ~~~Gt~~y~aPE~l~~~~-~s~~sDIwSLG~ll~elltG~~Pf~~-~~~~~~~~~i~~~~---------------~---~ 723 (782)
...+++.|+|||++.+.. ++.++|||||||++|+|++|..||.. .+.......+.... . .
T Consensus 158 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07839 158 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPY 237 (284)
T ss_pred CCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccccccc
Confidence 456789999999987754 68899999999999999999888643 33222222111000 0 0
Q ss_pred ---------cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 724 ---------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 724 ---------~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
....+.+++++++||.+||..||.+|||+.+++ .|+||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il------~h~~f 284 (284)
T cd07839 238 PMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEAL------QHPYF 284 (284)
T ss_pred CCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHh------cCCCC
Confidence 011235788999999999999999999999994 45665
No 193
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=4e-37 Score=327.54 Aligned_cols=254 Identities=28% Similarity=0.516 Sum_probs=211.5
Q ss_pred cccceeEeeeeccCCcEEEEEEEEcC-------CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-------SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~~-------~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
..++|++.+.||+|+||.||+|.+.+ ..|++|.+.... .......+..|+.+++.++|+||+++++++....
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC-SEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL 82 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 45689999999999999999998854 458888775433 2334456888999999999999999999999888
Q ss_pred ceeEEEeecCCCCHHHHHhhcC------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC---cEEE
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNT------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW---TVKV 646 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~---~vkL 646 (782)
..+++|||+.+++|.+++.... ..+++..++.++.||+.||+|||+++ ++|+||||+||+++.++ .+||
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH--FIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccchheEEEeccCCCcceEe
Confidence 9999999999999999997543 25889999999999999999999998 99999999999998654 5999
Q ss_pred EecCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccc
Q 003978 647 GDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQR 723 (782)
Q Consensus 647 ~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~ 723 (782)
+|||+++....... .......+..|+|||++.+..++.++|||||||++|+|++ |..||...........+. ....
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~-~~~~ 239 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVT-GGGR 239 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-cCCc
Confidence 99999876532211 1112234568999999999889999999999999999997 999998877666554443 2334
Q ss_pred cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003978 724 LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLR 760 (782)
Q Consensus 724 ~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~ 760 (782)
...+..++..+.+||.+||..+|++||++.+++++|.
T Consensus 240 ~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 240 LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 5567788999999999999999999999999998875
No 194
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.7e-38 Score=346.39 Aligned_cols=251 Identities=26% Similarity=0.445 Sum_probs=226.0
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
......|.+.+.||+|.|+.|.++++ ++..||||++.+.......++.+.+|+++|+.++|||||+++.+.+....+|
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ly 131 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLY 131 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeE
Confidence 34456899999999999999999987 6788999999988888777778999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
+||||+.+|.+++++.+++. ..+..+..++.|+++|++|||+++ |||||||++||||+.+.++||+|||++.... .
T Consensus 132 lV~eya~~ge~~~yl~~~gr-~~e~~ar~~F~q~vsaveYcH~k~--ivHrdLk~eNilL~~~mnikIaDfgfS~~~~-~ 207 (596)
T KOG0586|consen 132 LVMEYASGGELFDYLVKHGR-MKEKEARAKFRQIVSAVEYCHSKN--IVHRDLKAENILLDENMNIKIADFGFSTFFD-Y 207 (596)
T ss_pred EEEEeccCchhHHHHHhccc-chhhhhhhhhHHHHHHHHHHhhcc--eeccccchhhcccccccceeeeccccceeec-c
Confidence 99999999999999988764 555888899999999999999998 9999999999999999999999999998766 3
Q ss_pred cccccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 737 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~-s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~L 737 (782)
.....+.+|++.|.|||++.|..| .+.+|+||||++||-|++|.+||.+.+.......+ ....+.+|..++.++.++
T Consensus 208 ~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rv--l~gk~rIp~~ms~dce~l 285 (596)
T KOG0586|consen 208 GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRV--LRGKYRIPFYMSCDCEDL 285 (596)
T ss_pred cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchh--eeeeecccceeechhHHH
Confidence 455678899999999999999888 56899999999999999999999988776655554 455677888899999999
Q ss_pred HHHhhhhCCCCCCCHHHHHH
Q 003978 738 VESCWHSDPQCRPSFQELVD 757 (782)
Q Consensus 738 I~~cL~~dP~~RPs~~ell~ 757 (782)
|+++|..+|.+|++.+++.+
T Consensus 286 Lrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 286 LRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred HHHhhccCccccCCHHHhhh
Confidence 99999999999999999944
No 195
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.3e-37 Score=329.54 Aligned_cols=253 Identities=28% Similarity=0.452 Sum_probs=208.0
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecC------
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSP------ 574 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~------ 574 (782)
.+.|++.+.||+|+||.||+|.. .++.||+|++...... ...+..|+.+++.+ +||||+++++++...
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~---~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE---EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCcc---HHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 35688899999999999999987 4667999998654322 24677899999998 699999999998643
Q ss_pred CceeEEEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCc
Q 003978 575 QRLCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 653 (782)
Q Consensus 575 ~~~~lv~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~ 653 (782)
..+|++|||+.+++|.+++... ...+++..+..++.|++.||+|||+++ |+|+||||+||+++.++.++|+|||++.
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~--ivh~dl~~~nili~~~~~~~l~Dfg~~~ 159 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK--VIHRDIKGQNVLLTENAEVKLVDFGVSA 159 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHEEECCCCCEEEccCCCce
Confidence 4589999999999999999764 346889999999999999999999998 9999999999999999999999999987
Q ss_pred ccccccccccCCCCCCcccCccccc-----CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCC
Q 003978 654 LKHETYLTTKTGKGTPQWMAPEVLR-----NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPK 728 (782)
Q Consensus 654 ~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~ 728 (782)
.............|++.|+|||++. +..++.++|||||||++|+|++|..||...........+.........+.
T Consensus 160 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 239 (272)
T cd06637 160 QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSK 239 (272)
T ss_pred ecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCCCC
Confidence 6544333334567899999999986 34578899999999999999999999987665554444332223333445
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 729 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 729 ~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
.++..+.+||.+||..||.+||++.++ +.|+||
T Consensus 240 ~~~~~~~~li~~~l~~~p~~Rpt~~~i------l~~~~~ 272 (272)
T cd06637 240 KWSKKFQSFIESCLVKNHSQRPTTEQL------MKHPFI 272 (272)
T ss_pred CcCHHHHHHHHHHcCCChhhCCCHHHH------hhCCCC
Confidence 688999999999999999999999999 556664
No 196
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.3e-37 Score=330.08 Aligned_cols=256 Identities=21% Similarity=0.300 Sum_probs=212.6
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCH-HHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
.|+..++||.|+||.||++.+ .++.||+|++....... .....+.+|+++|+.++|+||+.+++.+..++.+|++||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 377889999999999999987 46789999987654432 234557789999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 583 FLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 583 ~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
|+.+++|.+++... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++....... .
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~ 157 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN--TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE-S 157 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCCHHHEEECCCCCEEEecCCcceecCCCC-c
Confidence 99999999888643 346899999999999999999999998 9999999999999999999999999986543221 1
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhc--cccccCCCCCCCHHHHHHHH
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGF--MNQRLEIPKDVDPRWAAIVE 739 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~--~~~~~~~p~~~~~~l~~LI~ 739 (782)
.....|++.|+|||++.+..++.++|+|||||++|+|++|..||...........+.. ......++..++.++.+||.
T Consensus 158 ~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 237 (285)
T cd05632 158 IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICK 237 (285)
T ss_pred ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHH
Confidence 2345789999999999998899999999999999999999999987765433333211 22233456678999999999
Q ss_pred HhhhhCCCCCCC-----HHHHHHHHHHHHHHHhhcc
Q 003978 740 SCWHSDPQCRPS-----FQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 740 ~cL~~dP~~RPs-----~~ell~~L~~L~~~~~~~~ 770 (782)
+||..||++||+ +.++ +.|+||+..
T Consensus 238 ~~l~~~P~~R~~~~~~~~~~l------~~~~~~~~~ 267 (285)
T cd05632 238 MLLTKDPKQRLGCQEEGAGEV------KRHPFFRNM 267 (285)
T ss_pred HHccCCHhHcCCCcccChHHH------HcChhhhcC
Confidence 999999999999 7777 567777554
No 197
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.7e-39 Score=319.83 Aligned_cols=258 Identities=25% Similarity=0.428 Sum_probs=219.7
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccC------CCHHHHHHHHHHHHHHHhC-CCCceeEEeeeee
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQE------YSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVT 572 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~------~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~ 572 (782)
-.+..|...+.||.|..+.|-++.+ .+..+|+|++.... ...+..+.-.+|+.||+++ .||+|+.+.++|+
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye 93 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE 93 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence 3456788899999999999999987 56779999885321 1235667788899999998 6999999999999
Q ss_pred cCCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCC
Q 003978 573 SPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLS 652 (782)
Q Consensus 573 ~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla 652 (782)
.+..+++|+|.|+.|.|+|+|.. ...++++....|++|++.|+.|||.++ ||||||||+|||++++.+|||+|||+|
T Consensus 94 s~sF~FlVFdl~prGELFDyLts-~VtlSEK~tR~iMrqlfegVeylHa~~--IVHRDLKpENILlddn~~i~isDFGFa 170 (411)
T KOG0599|consen 94 SDAFVFLVFDLMPRGELFDYLTS-KVTLSEKETRRIMRQLFEGVEYLHARN--IVHRDLKPENILLDDNMNIKISDFGFA 170 (411)
T ss_pred CcchhhhhhhhcccchHHHHhhh-heeecHHHHHHHHHHHHHHHHHHHHhh--hhhcccChhheeeccccceEEecccee
Confidence 99999999999999999999976 456999999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccCCCCCCcccCcccccC------CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCC
Q 003978 653 RLKHETYLTTKTGKGTPQWMAPEVLRN------EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEI 726 (782)
Q Consensus 653 ~~~~~~~~~~~~~~Gt~~y~aPE~l~~------~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~ 726 (782)
+..... ......||||.|+|||.+.. ..|+..+|+|++|++||-|+.|-+||......-.+..|...+....-
T Consensus 171 ~~l~~G-ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~s 249 (411)
T KOG0599|consen 171 CQLEPG-EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRS 249 (411)
T ss_pred eccCCc-hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCC
Confidence 876554 34456799999999999853 44677899999999999999999999877766666666544443333
Q ss_pred C--CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 727 P--KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 727 p--~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
| ..++...++||.+||+.||++|.|+.|+ |.|+||+.
T Consensus 250 peWadis~~~KdLIsrlLqVdp~~Ritake~------LaHpff~q 288 (411)
T KOG0599|consen 250 PEWADISATVKDLISRLLQVDPTKRITAKEA------LAHPFFIQ 288 (411)
T ss_pred cchhhccccHHHHHHHHHeeCchhcccHHHH------hcChHHHH
Confidence 3 3578889999999999999999999999 67899843
No 198
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2e-37 Score=330.54 Aligned_cols=255 Identities=29% Similarity=0.458 Sum_probs=214.2
Q ss_pred ceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
.|++.+.||.|+||.||++... +..+++|.+... .......+.+|+++++.++||||+++++++..++..|+||||
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~ 83 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 83 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC--CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence 4688899999999999999985 456788887543 244567788899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccccc
Q 003978 584 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTK 663 (782)
Q Consensus 584 ~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 663 (782)
+++++|..++.....++++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||++...........
T Consensus 84 ~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~--i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 161 (282)
T cd06643 84 CAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENK--IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRD 161 (282)
T ss_pred cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCcccEEEccCCCEEEccccccccccccccccc
Confidence 9999999988765567899999999999999999999998 99999999999999999999999999876544333334
Q ss_pred CCCCCCcccCccccc-----CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-ccccCCCCCCCHHHHHH
Q 003978 664 TGKGTPQWMAPEVLR-----NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM-NQRLEIPKDVDPRWAAI 737 (782)
Q Consensus 664 ~~~Gt~~y~aPE~l~-----~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~-~~~~~~p~~~~~~l~~L 737 (782)
...|++.|+|||++. +..++.++|||||||++|+|++|..||...+.......+... ......+..++.++.+|
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 241 (282)
T cd06643 162 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDF 241 (282)
T ss_pred cccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHH
Confidence 457899999999984 445678999999999999999999999887765554444222 22334556788999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 738 VESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 738 I~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
|.+||..||.+||++.++ ++|+||+..
T Consensus 242 i~~~l~~~p~~Rp~~~~i------l~~~~~~~~ 268 (282)
T cd06643 242 LKKCLEKNVDARWTTTQL------LQHPFVTVN 268 (282)
T ss_pred HHHHccCChhhCcCHHHH------hcCCCEecc
Confidence 999999999999999999 678888754
No 199
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=4.8e-37 Score=322.18 Aligned_cols=250 Identities=25% Similarity=0.415 Sum_probs=216.8
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
+|++.+.||.|+||.||.+.. .+..+++|.+............+.+|+++++.++|+||+++++++...+.++++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 589999999999999988876 567799999877666666667888999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 584 LPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 584 ~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
|++++|.+++... ...+++..+..++.|++.+|.|||+.+ ++|+||||+||+++.++.+||+|||++..........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~ 158 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG--ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMA 158 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCChHhEEEeCCCCEEECcCcceEEcccccccc
Confidence 9999999999764 456899999999999999999999998 9999999999999999999999999987654443233
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhh
Q 003978 663 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCW 742 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL 742 (782)
....|++.|+|||.+.+..++.++|||||||++|+|++|..||...........+.. ......+..++.++.++|.+||
T Consensus 159 ~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l 237 (256)
T cd08221 159 ETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQ-GNYTPVVSVYSSELISLVHSLL 237 (256)
T ss_pred cccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc-CCCCCCccccCHHHHHHHHHHc
Confidence 445789999999999988889999999999999999999999988776665555532 2233345678899999999999
Q ss_pred hhCCCCCCCHHHHHHH
Q 003978 743 HSDPQCRPSFQELVDK 758 (782)
Q Consensus 743 ~~dP~~RPs~~ell~~ 758 (782)
..+|.+||++.+++++
T Consensus 238 ~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 238 QQDPEKRPTADEVLDQ 253 (256)
T ss_pred ccCcccCCCHHHHhhC
Confidence 9999999999999654
No 200
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.9e-37 Score=331.51 Aligned_cols=262 Identities=27% Similarity=0.445 Sum_probs=218.3
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 576 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 576 (782)
.+.....+|++.+.||+|+||.||++.. .+..|++|.+....... ...+.+|+.+++.+.||||+++++.+.....
T Consensus 14 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~--~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~ 91 (296)
T cd06654 14 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPNIVNYLDSYLVGDE 91 (296)
T ss_pred ccCCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcch--HHHHHHHHHHHHhCCCCCEeeEEEEEEeCCE
Confidence 3344557999999999999999999986 56789999987654332 3667889999999999999999999999999
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
.|+||||+++++|.+++... .+++..++.++.|++.||.|||+.+ |+|+||||+|||++.++.++|+|||++....
T Consensus 92 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH~~g--i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~ 167 (296)
T cd06654 92 LWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (296)
T ss_pred EEEeecccCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcCCCCEEECccccchhcc
Confidence 99999999999999998643 4788899999999999999999998 9999999999999999999999999987543
Q ss_pred cccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-ccccCCCCCCCHHHH
Q 003978 657 ETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM-NQRLEIPKDVDPRWA 735 (782)
Q Consensus 657 ~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~-~~~~~~p~~~~~~l~ 735 (782)
..........|++.|+|||.+.+..++.++|||||||++|+|++|..||...........+... ......+..++..+.
T Consensus 168 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 247 (296)
T cd06654 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFR 247 (296)
T ss_pred ccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHH
Confidence 3322223456899999999999888899999999999999999999999876654433222211 112234567889999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
+||.+||..||++||++.++ +.++||...++
T Consensus 248 ~li~~~l~~~p~~Rpt~~ei------l~~~~~~~~~~ 278 (296)
T cd06654 248 DFLNRCLDMDVEKRGSAKEL------LQHQFLKIAKP 278 (296)
T ss_pred HHHHHHCcCCcccCcCHHHH------hhChhhhccCC
Confidence 99999999999999999999 56888876654
No 201
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3.6e-37 Score=334.18 Aligned_cols=259 Identities=23% Similarity=0.393 Sum_probs=216.7
Q ss_pred cceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCH-HHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
++|++.+.||+|+||.||+|... +..||||.+....... .....+..|+++++.++||||+++++.+......|+||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 47999999999999999999874 6789999998765443 45677889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc
Q 003978 582 EFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 660 (782)
Q Consensus 582 E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 660 (782)
||+.+++|.+++... ...+++..++.++.|++.||.|||..+ ++|+||||+||+|+.++.++|+|||++........
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 158 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG--IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPP 158 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC--eeccCCChHHeEEcCCCCEEEeecchhhccccccc
Confidence 999999999999753 356899999999999999999999998 99999999999999999999999998864322110
Q ss_pred -----------------------------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH
Q 003978 661 -----------------------------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM 711 (782)
Q Consensus 661 -----------------------------~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~ 711 (782)
......|+..|+|||++.+..++.++|||||||++|+|++|..||...+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~ 238 (316)
T cd05574 159 PVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD 238 (316)
T ss_pred ccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchH
Confidence 111236889999999999988999999999999999999999999888766
Q ss_pred HHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCC----HHHHHHHHHHHHHHHhhccc
Q 003978 712 QVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPS----FQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 712 ~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs----~~ell~~L~~L~~~~~~~~~ 771 (782)
.....+............++..+++||.+||..||++||+ +.++ +.|+||+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~l------l~~~~~~~~~ 296 (316)
T cd05574 239 ETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEI------KQHPFFRGVN 296 (316)
T ss_pred HHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHH------HcCchhhcCC
Confidence 6555443222222222237999999999999999999999 7887 5678987754
No 202
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-39 Score=348.40 Aligned_cols=245 Identities=32% Similarity=0.461 Sum_probs=216.6
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
.|.=++.||.|+||.||-+++ +...||||.+..... ..+..+.+..|++.|+.++|||+|.+-++|-.+...|||||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 455567899999999999987 456699999876543 45677889999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
|| -|+-.|++.-...++-+..+..|+.+.+.||+|||+++ .||||||..|||+++.|.|||+|||.|......
T Consensus 107 YC-lGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~--~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA---- 179 (948)
T KOG0577|consen 107 YC-LGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN--RIHRDIKAGNILLSEPGLVKLADFGSASIMAPA---- 179 (948)
T ss_pred HH-hccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhh--HHhhhccccceEecCCCeeeeccccchhhcCch----
Confidence 99 56999999888888999999999999999999999999 999999999999999999999999988755432
Q ss_pred cCCCCCCcccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHH
Q 003978 663 KTGKGTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVE 739 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~---~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~ 739 (782)
.+++|||.|||||++. ...|+-++|||||||+..||...++|+-+++.+..+..|.....+......++..+++|+.
T Consensus 180 nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fvd 259 (948)
T KOG0577|consen 180 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVD 259 (948)
T ss_pred hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHHH
Confidence 4789999999999985 4668999999999999999999999999999998888886544444445679999999999
Q ss_pred HhhhhCCCCCCCHHHHHH
Q 003978 740 SCWHSDPQCRPSFQELVD 757 (782)
Q Consensus 740 ~cL~~dP~~RPs~~ell~ 757 (782)
.||++-|.+|||..++++
T Consensus 260 ~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 260 SCLQKIPQERPTSEELLK 277 (948)
T ss_pred HHHhhCcccCCcHHHHhh
Confidence 999999999999999943
No 203
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=4.9e-37 Score=325.00 Aligned_cols=255 Identities=32% Similarity=0.569 Sum_probs=215.6
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc--C---CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY--G---SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~--~---~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
..+|++.+.||+|+||.||+|... + ..||||++... ........+..|+.+++.+.||||+++++++.....++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 81 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG-YTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVM 81 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceE
Confidence 357899999999999999999874 2 24999998653 34555678999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
+||||+++++|.+++......+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++......
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g--~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 82 IITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMN--YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred EEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccChheEEEcCCCcEEECCCccccccccC
Confidence 999999999999999876667899999999999999999999998 999999999999999999999999998754332
Q ss_pred ccc---c--cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCH
Q 003978 659 YLT---T--KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDP 732 (782)
Q Consensus 659 ~~~---~--~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~ 732 (782)
... . .....+..|++||.+.+..++.++|||||||++|||++ |..||...........+.. ......+..++.
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~-~~~~~~~~~~~~ 238 (269)
T cd05065 160 TSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQ-DYRLPPPMDCPT 238 (269)
T ss_pred ccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHc-CCcCCCcccCCH
Confidence 111 1 11112457999999999889999999999999999886 9999988877766655532 234445567899
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 733 RWAAIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 733 ~l~~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
.+.+++.+||..+|.+||++.+++..|+++
T Consensus 239 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 239 ALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 999999999999999999999999988765
No 204
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.9e-37 Score=338.72 Aligned_cols=254 Identities=24% Similarity=0.399 Sum_probs=204.6
Q ss_pred EeeeeccC--CcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeec
Q 003978 509 IGEQIGQG--SCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFL 584 (782)
Q Consensus 509 i~~~IG~G--~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~ 584 (782)
++++||+| +|++||++.. .++.||||.+............+.+|+.+++.++||||+++++++..++.+|+||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 56789999 6789999987 4678999999876655666778889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc---
Q 003978 585 PRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL--- 660 (782)
Q Consensus 585 ~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~--- 660 (782)
++++|.+++..+ ...+++..++.++.|++.||.|||+++ |+||||||+|||++.++.++++||+..........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~ 159 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG--YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLR 159 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCChhhEEEecCCcEEEcccchhhcccccccccc
Confidence 999999999654 345889999999999999999999998 99999999999999999999999986543211110
Q ss_pred ----cccCCCCCCcccCcccccC--CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc------------
Q 003978 661 ----TTKTGKGTPQWMAPEVLRN--EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ------------ 722 (782)
Q Consensus 661 ----~~~~~~Gt~~y~aPE~l~~--~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~------------ 722 (782)
......++..|+|||++.+ ..++.++|||||||++|+|++|..||.................
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (327)
T cd08227 160 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAE 239 (327)
T ss_pred ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhh
Confidence 1122356788999999976 4588999999999999999999999986654432222110000
Q ss_pred --------------------------------ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 723 --------------------------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 723 --------------------------------~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
.......+++.+.+||.+||+.||++|||+.++ ++|+||+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~el------l~~p~f~~~ 313 (327)
T cd08227 240 ELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTL------LNHSFFKQI 313 (327)
T ss_pred hcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHH------hcChhhhhc
Confidence 001112357789999999999999999999999 678888764
No 205
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.2e-36 Score=344.00 Aligned_cols=249 Identities=27% Similarity=0.353 Sum_probs=200.8
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
...|.+.+.||+|+||.||++.+. ++.||||.... ..+.+|+++|+.++|+|||++++++...+..|+||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~--------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~ 239 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY--------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVL 239 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc--------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 457999999999999999999984 56799996422 23567999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc-
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL- 660 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~- 660 (782)
|++ .++|..++......+++..++.++.||+.||.|||+++ ||||||||+||||+.++.+||+|||+++.......
T Consensus 240 e~~-~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g--IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~ 316 (461)
T PHA03211 240 PKY-RSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEG--IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST 316 (461)
T ss_pred Ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EEECcCCHHHEEECCCCCEEEcccCCceeccccccc
Confidence 999 56999998776667999999999999999999999998 99999999999999999999999999976433211
Q ss_pred -cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC--------hHHHHHHhhccccc-cCC----
Q 003978 661 -TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN--------SMQVIGAVGFMNQR-LEI---- 726 (782)
Q Consensus 661 -~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~--------~~~~~~~i~~~~~~-~~~---- 726 (782)
......||+.|+|||++.+..++.++|||||||+||||++|..|+-... ..+....+...... ..+
T Consensus 317 ~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~ 396 (461)
T PHA03211 317 PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHA 396 (461)
T ss_pred ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCc
Confidence 1223569999999999999999999999999999999999876542211 12222222111100 000
Q ss_pred -----------------C----------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 727 -----------------P----------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 727 -----------------p----------~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
+ ..++.++.+||.+||..||.+|||+.|+ |.|+||+.
T Consensus 397 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~el------L~hp~f~~ 460 (461)
T PHA03211 397 GSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAEL------LRLPLFQS 460 (461)
T ss_pred chHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHH------hhCcccCC
Confidence 0 1345689999999999999999999999 77899975
No 206
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=2.5e-37 Score=331.65 Aligned_cols=254 Identities=33% Similarity=0.560 Sum_probs=212.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEEcC------------------CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcee
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWYG------------------SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVL 565 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~~------------------~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv 565 (782)
..+|++++.||+|+||.||++.... ..||+|++.... .......+.+|+++++.++||||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-SDNAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhcCCCCEe
Confidence 4689999999999999999997643 348999887543 334567888999999999999999
Q ss_pred EEeeeeecCCceeEEEeecCCCCHHHHHhhcC----------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCc
Q 003978 566 LFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNT----------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSN 635 (782)
Q Consensus 566 ~l~~~~~~~~~~~lv~E~~~ggsL~~~l~~~~----------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~N 635 (782)
++++++..+...+++|||+.+++|.+++.... ..+++..++.++.|++.||.|||+++ |+|+||||+|
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~--i~H~dlkp~N 160 (296)
T cd05051 83 RLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN--FVHRDLATRN 160 (296)
T ss_pred EEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC--ccccccchhc
Confidence 99999999999999999999999999997643 26899999999999999999999998 9999999999
Q ss_pred EEEcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc--CCCCCCCCChH
Q 003978 636 LLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT--EKIPWDNLNSM 711 (782)
Q Consensus 636 ILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt--G~~Pf~~~~~~ 711 (782)
|+++.++.++|+|||++....... .......+++.|+|||.+.+..++.++|||||||++|+|++ +..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ 240 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH
Confidence 999999999999999987543321 12223456789999999998889999999999999999998 78899887766
Q ss_pred HHHHHhhcc------ccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003978 712 QVIGAVGFM------NQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLR 760 (782)
Q Consensus 712 ~~~~~i~~~------~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~ 760 (782)
..+..+... ......+..++.++.+||.+||..||.+|||+.+|++.|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 241 QVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 665554322 1112344567899999999999999999999999988775
No 207
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=5e-37 Score=322.74 Aligned_cols=246 Identities=30% Similarity=0.550 Sum_probs=207.8
Q ss_pred eeeccCCcEEEEEEEEcC-----CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecC
Q 003978 511 EQIGQGSCGTVYHAVWYG-----SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLP 585 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~~~-----~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ 585 (782)
++||+|+||.||+|.+.. ..+|+|.+...... .....+.+|+++++.+.|||||++++++. ....+++|||+.
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCC
Confidence 469999999999998632 46999998765543 44567889999999999999999999876 456899999999
Q ss_pred CCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc---c
Q 003978 586 RGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT---T 662 (782)
Q Consensus 586 ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~---~ 662 (782)
+++|.+++.... .+++..++.++.|++.||.|||..+ ++|+||||+|||++.++.+||+|||+++........ .
T Consensus 79 ~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~~--i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~ 155 (257)
T cd05060 79 LGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESKH--FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRAT 155 (257)
T ss_pred CCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcC--eeccCcccceEEEcCCCcEEeccccccceeecCCcccccc
Confidence 999999997654 6899999999999999999999998 999999999999999999999999998755332211 1
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHh
Q 003978 663 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 741 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~c 741 (782)
....++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+....+.. ......+..++..++++|.+|
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~c 234 (257)
T cd05060 156 TAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLES-GERLPRPEECPQEIYSIMLSC 234 (257)
T ss_pred cCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc-CCcCCCCCCCCHHHHHHHHHH
Confidence 12234568999999999889999999999999999998 9999998877666555532 334456778899999999999
Q ss_pred hhhCCCCCCCHHHHHHHHHHH
Q 003978 742 WHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 742 L~~dP~~RPs~~ell~~L~~L 762 (782)
|..+|++||++.++++.|.++
T Consensus 235 l~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 235 WKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred hcCChhhCcCHHHHHHHHHhc
Confidence 999999999999999998765
No 208
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=3.6e-37 Score=328.45 Aligned_cols=250 Identities=28% Similarity=0.446 Sum_probs=206.0
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
++|++.++||+|+||.||++.+ .+..||||++.... .......+.+|+++++.++||||+++++.+..++..++|||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI-TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTE 79 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC-ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEe
Confidence 4688899999999999999986 56779999987543 34445678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
|+++++|..+. .+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.++|+|||++....... .
T Consensus 80 ~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~--~ 150 (279)
T cd06619 80 FMDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWSLK--ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI--A 150 (279)
T ss_pred cCCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHHCC--EeeCCCCHHHEEECCCCCEEEeeCCcceeccccc--c
Confidence 99999986552 4678888899999999999999998 9999999999999999999999999987554332 2
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH-------HHHHHhhccccccCCCCCCCHHHH
Q 003978 663 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM-------QVIGAVGFMNQRLEIPKDVDPRWA 735 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~-------~~~~~i~~~~~~~~~p~~~~~~l~ 735 (782)
....|++.|+|||++.+..++.++|||||||++|+|++|..||...... .....+.............++++.
T Consensus 151 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (279)
T cd06619 151 KTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFV 230 (279)
T ss_pred cCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHH
Confidence 3457899999999999988999999999999999999999999653321 111111111111112335788999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
+||.+||..+|.+||++.++ +.++||+..
T Consensus 231 ~li~~~l~~~P~~Rp~~~ei------l~~~~~~~~ 259 (279)
T cd06619 231 HFITQCMRKQPKERPAPENL------MDHPFIVQY 259 (279)
T ss_pred HHHHHHhhCChhhCCCHHHH------hcCcccccc
Confidence 99999999999999999999 567888654
No 209
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=3.3e-37 Score=325.43 Aligned_cols=248 Identities=31% Similarity=0.532 Sum_probs=210.5
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCC-------HHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYS-------DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 576 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~-------~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 576 (782)
+|.+.+.||.|+||.||+|.. .++.+|+|.+...... ....+.+.+|+.+++.++||||+++++++.....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 477889999999999999987 4678999988654322 2345678899999999999999999999999999
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
.+++|||+++++|.+++... ..+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||+++...
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~~~--ivH~di~p~nil~~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHNRG--IIHRDIKGANILVDNKGGIKISDFGISKKLE 157 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHhcC--cccccCCHHHEEEcCCCCEEecccCCCcccc
Confidence 99999999999999999764 46888999999999999999999998 9999999999999999999999999987654
Q ss_pred cccc------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCC
Q 003978 657 ETYL------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDV 730 (782)
Q Consensus 657 ~~~~------~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~ 730 (782)
.... ......|+..|+|||.+.+..++.++|+|||||++|+|++|..||...+.......+.. ...+.++..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~ 236 (267)
T cd06628 158 ANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE-NASPEIPSNI 236 (267)
T ss_pred cccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc-cCCCcCCccc
Confidence 2111 11123578999999999988889999999999999999999999988766555444432 3345667788
Q ss_pred CHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003978 731 DPRWAAIVESCWHSDPQCRPSFQELVD 757 (782)
Q Consensus 731 ~~~l~~LI~~cL~~dP~~RPs~~ell~ 757 (782)
+..+.++|.+||+.||.+||++.++++
T Consensus 237 ~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 237 SSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred CHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 999999999999999999999999943
No 210
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=5e-37 Score=332.50 Aligned_cols=256 Identities=23% Similarity=0.407 Sum_probs=211.5
Q ss_pred cceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
++|++.+.||+|+||.||++.+. +..+|+|.+.... .......+.+|+++++.++||||+++++.+..++.+|++||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI-KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICME 79 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEee
Confidence 36999999999999999999874 5668889886532 34556678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhc-CCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~-~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
|+++++|.+++... ..+++..+..++.|++.||.|||+ ++ ++|+||||+|||++.++.+||+|||++.......
T Consensus 80 y~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-- 154 (308)
T cd06615 80 HMDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-- 154 (308)
T ss_pred ccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCC--EEECCCChHHEEEecCCcEEEccCCCcccccccc--
Confidence 99999999999765 468899999999999999999997 57 9999999999999999999999999987554332
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc--------------------
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN-------------------- 721 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~-------------------- 721 (782)
.....|++.|+|||++.+..++.++|||||||++|+|++|..||...+.......+....
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (308)
T cd06615 155 ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSP 234 (308)
T ss_pred cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCcc
Confidence 234578999999999998889999999999999999999999997655433322221100
Q ss_pred ---------------cccCCC-CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 722 ---------------QRLEIP-KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 722 ---------------~~~~~p-~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
..+.+| ..++.++++||.+||..||++||++.++ ++++||+....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~l------l~~~~~~~~~~ 295 (308)
T cd06615 235 RPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKEL------TKHPFIKRAEL 295 (308)
T ss_pred chhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHH------hcChhhhhccc
Confidence 011111 1367889999999999999999999999 67899876433
No 211
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.9e-37 Score=327.62 Aligned_cols=255 Identities=33% Similarity=0.536 Sum_probs=217.4
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
++|++.+.||.|+||.||++.. .++.|++|++.... .......+.+|+++++.++|+||+++++.+..+..+|+|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIME 79 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEE
Confidence 3688899999999999999987 46789999987543 23344667889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
|+++++|.+++... ++++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||+++.........
T Consensus 80 ~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~ 155 (274)
T cd06609 80 YCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEG--KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKR 155 (274)
T ss_pred eeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCCCCEEEcccccceeeccccccc
Confidence 99999999999764 6899999999999999999999988 9999999999999999999999999997665443333
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCC-CCHHHHHHHHHh
Q 003978 663 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKD-VDPRWAAIVESC 741 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~-~~~~l~~LI~~c 741 (782)
....+++.|+|||.+.+..++.++|||||||++|+|++|..||...+.......+... ....++.. ++.++.++|.+|
T Consensus 156 ~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~ 234 (274)
T cd06609 156 NTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN-NPPSLEGNKFSKPFKDFVSLC 234 (274)
T ss_pred ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc-CCCCCcccccCHHHHHHHHHH
Confidence 4557889999999999988999999999999999999999999877655554443322 23333444 889999999999
Q ss_pred hhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 742 WHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 742 L~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
|..+|++||++.++ +.++||+...
T Consensus 235 l~~~p~~Rpt~~~i------l~~~~~~~~~ 258 (274)
T cd06609 235 LNKDPKERPSAKEL------LKHKFIKKAK 258 (274)
T ss_pred hhCChhhCcCHHHH------hhChhhcCCC
Confidence 99999999999999 5689987643
No 212
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2e-37 Score=324.42 Aligned_cols=246 Identities=31% Similarity=0.529 Sum_probs=211.9
Q ss_pred cceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
++|++.++||.|+||.||++... +..+++|.++.... ...+.+|+++++.++||||+++++.+.....+|+++|
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e 78 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED----LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVME 78 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH----HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEe
Confidence 57999999999999999999985 57899999865321 5788899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
|+.+++|.+++......+++..++.++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++..........
T Consensus 79 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~--i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~ 156 (256)
T cd06612 79 YCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNK--KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKR 156 (256)
T ss_pred cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEECCCCcEEEcccccchhcccCcccc
Confidence 99999999999876677899999999999999999999998 9999999999999999999999999987655443333
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-ccccCCCCCCCHHHHHHHHHh
Q 003978 663 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM-NQRLEIPKDVDPRWAAIVESC 741 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~-~~~~~~p~~~~~~l~~LI~~c 741 (782)
....|+..|+|||.+.+..++.++|||||||++|+|++|..||...........+... ......+..++.++.+||.+|
T Consensus 157 ~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 236 (256)
T cd06612 157 NTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKC 236 (256)
T ss_pred ccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHH
Confidence 3456889999999999998999999999999999999999999877665444333211 122334456788999999999
Q ss_pred hhhCCCCCCCHHHHH
Q 003978 742 WHSDPQCRPSFQELV 756 (782)
Q Consensus 742 L~~dP~~RPs~~ell 756 (782)
|..||++|||+.+++
T Consensus 237 l~~~P~~Rps~~~il 251 (256)
T cd06612 237 LVKDPEERPSAIQLL 251 (256)
T ss_pred HhcChhhCcCHHHHh
Confidence 999999999999994
No 213
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=8.5e-37 Score=322.75 Aligned_cols=256 Identities=30% Similarity=0.527 Sum_probs=215.5
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc--CC---eEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY--GS---DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~--~~---~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
...+|+..+.||+|+||.||+|... +. .++||.++... .....+.+..|+++++.++||||+++++++...+..
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (268)
T cd05063 3 HPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPA 81 (268)
T ss_pred ChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCc
Confidence 3457889999999999999999873 22 58999886543 344456788999999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|+||||+++++|.+++......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++.....
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 82 MIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMN--YVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 9999999999999999876667899999999999999999999998 99999999999999999999999999875543
Q ss_pred ccccc---cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHH
Q 003978 658 TYLTT---KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPR 733 (782)
Q Consensus 658 ~~~~~---~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~ 733 (782)
..... .....++.|+|||++.+..++.++|||||||++|+|++ |..||...+.......+.. ......+..++..
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~-~~~~~~~~~~~~~ 238 (268)
T cd05063 160 DPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAIND-GFRLPAPMDCPSA 238 (268)
T ss_pred ccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhc-CCCCCCCCCCCHH
Confidence 22111 11223567999999998888999999999999999997 9999988777666655542 2233445568899
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 734 WAAIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 734 l~~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
+.+||.+||..+|++||++.++++.|+++
T Consensus 239 ~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 239 VYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 99999999999999999999999998876
No 214
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=4.1e-37 Score=323.30 Aligned_cols=250 Identities=32% Similarity=0.503 Sum_probs=212.2
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
.++|++.+.||.|+||.||++.. .+..+++|++..... ...+.+.+|+.+++.++||||+++++.+.....+|++|
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG--DDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch--hhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 36899999999999999999987 456799999875532 24578889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
||+.+++|.+++......+++..++.++.|++.||.|||+++ |+|+||||+||+++.++.+||+|||++.........
T Consensus 80 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~ 157 (262)
T cd06613 80 EYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETG--KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAK 157 (262)
T ss_pred eCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCChhhEEECCCCCEEECccccchhhhhhhhc
Confidence 999999999999876567999999999999999999999998 999999999999999999999999998765443323
Q ss_pred ccCCCCCCcccCcccccCC---CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc---ccCCCCCCCHHHH
Q 003978 662 TKTGKGTPQWMAPEVLRNE---PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ---RLEIPKDVDPRWA 735 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~---~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~---~~~~p~~~~~~l~ 735 (782)
.....++..|++||.+.+. .++.++|||||||++|+|++|..||...........+..... ....+..++.++.
T Consensus 158 ~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (262)
T cd06613 158 RKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFH 237 (262)
T ss_pred cccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHH
Confidence 3345788999999999877 788999999999999999999999988776555444332211 1122345678899
Q ss_pred HHHHHhhhhCCCCCCCHHHHHH
Q 003978 736 AIVESCWHSDPQCRPSFQELVD 757 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~ 757 (782)
+||.+||..+|.+||++.+++.
T Consensus 238 ~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 238 DFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred HHHHHHcCCChhhCCCHHHHhc
Confidence 9999999999999999999964
No 215
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2e-37 Score=327.38 Aligned_cols=251 Identities=27% Similarity=0.419 Sum_probs=205.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
..+|++.++||+|+||.||++.. .++.||+|++...... ....+.+|+.+++.++||||+++++.+..+..+|+||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~--~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~ 85 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGD--DFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICM 85 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccc--hHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Confidence 45899999999999999999987 5677999998654322 2346778999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
||+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++.........
T Consensus 86 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd06646 86 EYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLHSKG--KMHRDIKGANILLTDNGDVKLADFGVAAKITATIAK 162 (267)
T ss_pred eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECCCCCEEECcCccceeecccccc
Confidence 999999999998654 46899999999999999999999998 999999999999999999999999998765433222
Q ss_pred ccCCCCCCcccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc---cCCCCCCCHHHH
Q 003978 662 TKTGKGTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR---LEIPKDVDPRWA 735 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~---~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~---~~~p~~~~~~l~ 735 (782)
.....|++.|+|||.+. ...++.++|||||||++|+|++|..||...........+...... ...+..++..+.
T Consensus 163 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (267)
T cd06646 163 RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFH 242 (267)
T ss_pred cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHH
Confidence 33456889999999985 344678999999999999999999999766544332222111111 112235788999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHH
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKL 759 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L 759 (782)
+||.+||..+|++||++.+++++|
T Consensus 243 ~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 243 NFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred HHHHHHhhCChhhCcCHHHHhcCC
Confidence 999999999999999999997653
No 216
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=6.1e-37 Score=326.97 Aligned_cols=254 Identities=30% Similarity=0.520 Sum_probs=205.4
Q ss_pred cce-eEeeeeccCCcEEEEEEEE------cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC--C
Q 003978 505 EDL-TIGEQIGQGSCGTVYHAVW------YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP--Q 575 (782)
Q Consensus 505 ~~y-~i~~~IG~G~~G~Vy~~~~------~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~ 575 (782)
++| ++.+.||+|+||+||++.+ .+..||+|+++... .......+.+|+++|+.++||||+++++++... .
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC-GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGK 81 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCc
Confidence 344 8999999999999998764 35569999987543 233456788899999999999999999987643 4
Q ss_pred ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
.+|++|||+.+++|.+++... .+++..++.++.|++.||.|||+++ |+|+||||+|||++.++.+||+|||++...
T Consensus 82 ~~~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 82 GLQLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHSQH--YIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred eEEEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHCC--eeccccChheEEEcCCCcEEEeeccccccc
Confidence 589999999999999999754 4899999999999999999999998 999999999999999999999999998765
Q ss_pred ccccc---cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH--HH------------HHhh
Q 003978 656 HETYL---TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ--VI------------GAVG 718 (782)
Q Consensus 656 ~~~~~---~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~--~~------------~~i~ 718 (782)
..... ......++..|+|||.+.+..++.++|||||||++|+|++|..||......- .. ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05080 158 PEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELL 237 (283)
T ss_pred CCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhh
Confidence 43221 1122345677999999998889999999999999999999999986543210 00 0000
Q ss_pred ccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003978 719 FMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 763 (782)
Q Consensus 719 ~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~ 763 (782)
........+..++.++.+++.+||..+|++|||++++++.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 238 ERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 111223345678899999999999999999999999999998875
No 217
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.9e-37 Score=340.72 Aligned_cols=248 Identities=24% Similarity=0.361 Sum_probs=198.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
...|++++.||+|+||.||+|... +..||+|+..... ...|+.+++.++||||+++++++......|+||
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~--------~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 136 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT--------TLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL 136 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc--------cHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence 347999999999999999999984 4579999854322 245899999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
||+ .++|.+++......+++..++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++...... .
T Consensus 137 e~~-~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-~ 212 (357)
T PHA03209 137 PHY-SSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQR--IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP-A 212 (357)
T ss_pred Ecc-CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEEecCccccccccCc-c
Confidence 999 56999998776778999999999999999999999998 9999999999999999999999999987543322 2
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCC-CCCChH----------HHHHHhhcccc-ccCCC--
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPW-DNLNSM----------QVIGAVGFMNQ-RLEIP-- 727 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf-~~~~~~----------~~~~~i~~~~~-~~~~p-- 727 (782)
.....||+.|+|||++.+..++.++|||||||++|||+++..|+ ...... .....+..... ...++
T Consensus 213 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 292 (357)
T PHA03209 213 FLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRD 292 (357)
T ss_pred cccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCC
Confidence 22456899999999999999999999999999999999865444 332111 01100100000 00011
Q ss_pred ----------------------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 728 ----------------------------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 728 ----------------------------~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
..++.++.+||.+||..||.+|||+.++ |.|+||+.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~------l~hp~f~~ 356 (357)
T PHA03209 293 PGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEI------LNYPMFAQ 356 (357)
T ss_pred CccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHH------hcCchhcc
Confidence 1456678889999999999999999999 77899975
No 218
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=4.9e-37 Score=324.71 Aligned_cols=254 Identities=30% Similarity=0.509 Sum_probs=213.0
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC---CHHHHHHHHHHHHHHHhCCCCceeEEeeeeec--CCce
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY---SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS--PQRL 577 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~---~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~~~~ 577 (782)
.+|++.+.||+|+||.||++.. .+..|++|++..... .......+.+|+.+++.++||||+++++.+.. ...+
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 3688999999999999999986 467899999875432 22455678899999999999999999998865 3568
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
+++|||+++++|.+++.... .+++...+.++.|++.||+|||+++ |+|+||||+||+++.++.+||+|||++.....
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~--i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLHSNM--IVHRDIKGANILRDSAGNVKLGDFGASKRLQT 158 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECCCCCEEEccCCCcccccc
Confidence 89999999999999997643 5888999999999999999999988 99999999999999999999999999875432
Q ss_pred cc---ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHH
Q 003978 658 TY---LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 734 (782)
Q Consensus 658 ~~---~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l 734 (782)
.. .......++..|+|||.+.+..++.++|||||||++|+|++|..||...........+......+.++..+++.+
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (266)
T cd06651 159 ICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHA 238 (266)
T ss_pred ccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhcCHHH
Confidence 11 111234578999999999998899999999999999999999999987766655555444444566677889999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003978 735 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 768 (782)
Q Consensus 735 ~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~ 768 (782)
++|| +||..+|++||++.++ +.|+||+
T Consensus 239 ~~li-~~~~~~p~~Rp~~~ei------l~hp~~~ 265 (266)
T cd06651 239 RDFL-GCIFVEARHRPSAEEL------LRHPFAQ 265 (266)
T ss_pred HHHH-HHhcCChhhCcCHHHH------hcCcccc
Confidence 9999 6888999999999999 6788875
No 219
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=5.2e-37 Score=327.35 Aligned_cols=253 Identities=32% Similarity=0.555 Sum_probs=212.8
Q ss_pred cccceeEeeeeccCCcEEEEEEEE-------cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW-------YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~-------~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
.+.+|.+.++||+|+||.||++.. .+..+++|.+... .......+.+|+++++.++|+||+++++++....
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (280)
T cd05092 3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTVLQHQHIVRFYGVCTEGR 80 (280)
T ss_pred ChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC--CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC
Confidence 456889999999999999999964 2346888887543 3444567899999999999999999999999999
Q ss_pred ceeEEEeecCCCCHHHHHhhcC--------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNT--------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH 641 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~--------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~ 641 (782)
..+++|||+++++|.+++.... ..+++..++.++.||+.||+|||+++ |+|+||||+|||++++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~--i~H~dlkp~nil~~~~ 158 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH--FVHRDLATRNCLVGQG 158 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC--eecccccHhhEEEcCC
Confidence 9999999999999999997543 24788999999999999999999998 9999999999999999
Q ss_pred CcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhh
Q 003978 642 WTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVG 718 (782)
Q Consensus 642 ~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~ 718 (782)
+.+||+|||++....... .......+++.|+|||.+.+..++.++|||||||++|+|++ |.+||...........+.
T Consensus 159 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~ 238 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECIT 238 (280)
T ss_pred CCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHH
Confidence 999999999987543221 11223345788999999999999999999999999999998 999998877766655553
Q ss_pred ccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003978 719 FMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLR 760 (782)
Q Consensus 719 ~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~ 760 (782)
. ......+..+++.+.+||.+||..||.+||++.++++.|+
T Consensus 239 ~-~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 239 Q-GRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred c-CccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 2 2334566788999999999999999999999999998775
No 220
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-37 Score=342.36 Aligned_cols=258 Identities=35% Similarity=0.574 Sum_probs=207.5
Q ss_pred cccceeEeeeeccCCcEEEEEEEEcC-CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC-ceeEE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWYG-SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ-RLCIV 580 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~~-~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~-~~~lv 580 (782)
-.++|.-...||+|+||.||+|...+ +.||||.+....... ..+|.+|+.++..++|||+|+++|+|.+.+ ..+||
T Consensus 73 AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LV 150 (361)
T KOG1187|consen 73 ATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLV 150 (361)
T ss_pred HHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEE
Confidence 34688888999999999999999865 889999876654432 345999999999999999999999999888 49999
Q ss_pred EeecCCCCHHHHHhhcCC-cchHHHHHHHHHHHHHHHHhhhcC-CCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc-
Q 003978 581 TEFLPRGSLFRLLQRNTT-KLDWRRRILMALDIARGVSYLHHC-NPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE- 657 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~-~l~~~~~~~i~~qll~aL~~LH~~-~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~- 657 (782)
+|||+.|+|.++|..... +++|..+++|+.++++||+|||.. .++||||||||+|||+|.++..||+|||+|+....
T Consensus 151 YEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~ 230 (361)
T KOG1187|consen 151 YEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEG 230 (361)
T ss_pred EEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcc
Confidence 999999999999977655 899999999999999999999984 34799999999999999999999999999976654
Q ss_pred ccccccCC-CCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC---hHHHHHH----hhc--c--ccccC
Q 003978 658 TYLTTKTG-KGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN---SMQVIGA----VGF--M--NQRLE 725 (782)
Q Consensus 658 ~~~~~~~~-~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~---~~~~~~~----i~~--~--~~~~~ 725 (782)
... .... .||..|++||.+.....+.|+||||+|++|+||++|+.|..... ....... +.. . .-.+.
T Consensus 231 ~~~-~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~ 309 (361)
T KOG1187|consen 231 DTS-VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPR 309 (361)
T ss_pred ccc-eeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCC
Confidence 211 1122 79999999999998889999999999999999999998876432 1111111 100 0 00122
Q ss_pred CC-CCCC--H---HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003978 726 IP-KDVD--P---RWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 763 (782)
Q Consensus 726 ~p-~~~~--~---~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~ 763 (782)
+. ...+ . .+..+..+|++.+|.+||++.++++.|+.+.
T Consensus 310 l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 310 LKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred ccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 22 2333 2 3567888999999999999999988885554
No 221
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=4.4e-37 Score=330.41 Aligned_cols=255 Identities=31% Similarity=0.514 Sum_probs=210.1
Q ss_pred cccceeEeeeeccCCcEEEEEEEEcC----------------CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWYG----------------SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLL 566 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~~----------------~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~ 566 (782)
...+|++.++||+|+||.||++...+ ..||||+++... .......+.+|+++++.++||||++
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~ 81 (295)
T cd05097 3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV-TKTARNDFLKEIKIMSRLKNPNIIR 81 (295)
T ss_pred chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCcCe
Confidence 45689999999999999999997632 238999987543 3455667889999999999999999
Q ss_pred EeeeeecCCceeEEEeecCCCCHHHHHhhcC-----------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCc
Q 003978 567 FMGAVTSPQRLCIVTEFLPRGSLFRLLQRNT-----------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSN 635 (782)
Q Consensus 567 l~~~~~~~~~~~lv~E~~~ggsL~~~l~~~~-----------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~N 635 (782)
+++++......++||||+.+++|.+++.... ..+++..++.++.|++.||.|||+++ ++|+||||+|
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~N 159 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN--FVHRDLATRN 159 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC--eeccccChhh
Confidence 9999999999999999999999999986432 13678888999999999999999998 9999999999
Q ss_pred EEEcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc--CCCCCCCCChH
Q 003978 636 LLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT--EKIPWDNLNSM 711 (782)
Q Consensus 636 ILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt--G~~Pf~~~~~~ 711 (782)
|+++.++.+||+|||++....... .......+++.|+|||++.+..++.++|||||||++|+|++ +..||......
T Consensus 160 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~ 239 (295)
T cd05097 160 CLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE 239 (295)
T ss_pred EEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH
Confidence 999999999999999987543321 11122345778999999998889999999999999999988 77899887766
Q ss_pred HHHHHhhccc------cccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003978 712 QVIGAVGFMN------QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLR 760 (782)
Q Consensus 712 ~~~~~i~~~~------~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~ 760 (782)
+....+.... .....++.+++.+.+||.+||..||++||++.++++.|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 240 QVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 5554432111 123345668899999999999999999999999988775
No 222
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=3.3e-37 Score=328.55 Aligned_cols=254 Identities=25% Similarity=0.362 Sum_probs=207.7
Q ss_pred cceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
++|++.+.||+|+||.||++... ++.||+|++..........+.+.+|+.+++.++||||+++++++.....+++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 47999999999999999999874 6789999987554333334567889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
|++++.|..++.. ...+++..++.++.||+.||.|||+++ |+|+||||+||+++.++.++|+|||++..........
T Consensus 81 ~~~~~~l~~~~~~-~~~~~~~~~~~~~~ql~~~l~~LH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 157 (286)
T cd07847 81 YCDHTVLNELEKN-PRGVPEHLIKKIIWQTLQAVNFCHKHN--CIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDY 157 (286)
T ss_pred ccCccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCChhhEEEcCCCcEEECccccceecCCCcccc
Confidence 9998888777654 346899999999999999999999998 9999999999999999999999999997655443233
Q ss_pred cCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-----------------cc
Q 003978 663 KTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-----------------RL 724 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~-----------------~~ 724 (782)
....++..|+|||++.+ ..++.++|||||||++|+|++|..||......+....+..... ..
T Consensus 158 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T cd07847 158 TDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGL 237 (286)
T ss_pred cCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccc
Confidence 34467889999999876 4578899999999999999999999987766544433211000 00
Q ss_pred C------------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 725 E------------IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 725 ~------------~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
. ....++..+.+||.+||..+|++||++.++ +.|+||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ei------l~~~~f 286 (286)
T cd07847 238 SIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEEL------LEHPYF 286 (286)
T ss_pred cCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHH------hcCCCC
Confidence 0 012467889999999999999999999999 556665
No 223
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=5.2e-37 Score=323.87 Aligned_cols=253 Identities=30% Similarity=0.501 Sum_probs=212.4
Q ss_pred ceeEeeeeccCCcEEEEEEEE-cCCeEEEEEEeccCC----CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW-YGSDVAVKVFSRQEY----SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~-~~~~vAiK~~~~~~~----~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
+|++.+.||.|+||.||++.. .++.+|+|.+..... .......+.+|+++++.++|+||+++++++...+.+|++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 478899999999999999976 667799999875432 223456788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc--
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET-- 658 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~-- 658 (782)
|||+++++|.+++.+. ..+++..+..++.|++.||+|||+.+ |+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 157 (265)
T cd06631 81 MEFVPGGSISSILNRF-GPLPEPVFCKYTKQILDGVAYLHNNC--VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL 157 (265)
T ss_pred EecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcCHHhEEECCCCeEEeccchhhHhhhhccc
Confidence 9999999999999764 35889999999999999999999998 999999999999999999999999998653211
Q ss_pred ----cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-ccccCCCCCCCHH
Q 003978 659 ----YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM-NQRLEIPKDVDPR 733 (782)
Q Consensus 659 ----~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~-~~~~~~p~~~~~~ 733 (782)
........|++.|+|||++.+..++.++|||||||++|+|++|..||...+.......+... ...+.++..++.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (265)
T cd06631 158 HGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAA 237 (265)
T ss_pred cccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHH
Confidence 11122346899999999999988999999999999999999999999877655544333222 2234567789999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 734 WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 734 l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
+.+||.+||..+|.+||++.++ +.|+||
T Consensus 238 ~~~~i~~~l~~~p~~Rp~~~~~------l~~~~~ 265 (265)
T cd06631 238 AIDFVTSCLTRDQHERPSALQL------LRHDFL 265 (265)
T ss_pred HHHHHHHHhcCCcccCCCHHHH------hcCCCC
Confidence 9999999999999999999999 455654
No 224
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=4.5e-37 Score=322.59 Aligned_cols=246 Identities=33% Similarity=0.579 Sum_probs=211.6
Q ss_pred eeeccCCcEEEEEEEEcC---C--eEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecC
Q 003978 511 EQIGQGSCGTVYHAVWYG---S--DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLP 585 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~~~---~--~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ 585 (782)
++||+|+||.||++.+.. + .||||.+...... ...+.+.+|+.+++.++||||+++++.+.. ..++++|||++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecC
Confidence 468999999999998632 2 5899998776544 566789999999999999999999999988 88999999999
Q ss_pred CCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc---cc
Q 003978 586 RGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY---LT 661 (782)
Q Consensus 586 ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~---~~ 661 (782)
+++|.+++.... ..+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++....... ..
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 156 (257)
T cd05040 79 LGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR--FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM 156 (257)
T ss_pred CCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC--ccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence 999999997654 56899999999999999999999998 9999999999999999999999999987654321 11
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHH
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVES 740 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~ 740 (782)
.....++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+....+.........+..++..+.+++.+
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 236 (257)
T cd05040 157 EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQ 236 (257)
T ss_pred ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHH
Confidence 223457789999999999889999999999999999998 9999988877776666654444555667789999999999
Q ss_pred hhhhCCCCCCCHHHHHHHHH
Q 003978 741 CWHSDPQCRPSFQELVDKLR 760 (782)
Q Consensus 741 cL~~dP~~RPs~~ell~~L~ 760 (782)
||..+|++||++.++++.|.
T Consensus 237 ~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 237 CWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HCCCCcccCCCHHHHHHHhc
Confidence 99999999999999988764
No 225
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.5e-37 Score=331.98 Aligned_cols=260 Identities=27% Similarity=0.448 Sum_probs=217.4
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
....+|++.+.||.|+||.||++.. .++.||||.+....... ...+.+|+.+++.++||||+++++++......|+
T Consensus 16 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l 93 (297)
T cd06656 16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPK--KELIINEILVMRENKNPNIVNYLDSYLVGDELWV 93 (297)
T ss_pred ChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccch--HHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEE
Confidence 3457899999999999999999986 57789999987544332 3567889999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
||||+++++|.+++... .+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.++|+|||++.......
T Consensus 94 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~LH~~~--i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~ 169 (297)
T cd06656 94 VMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (297)
T ss_pred eecccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence 99999999999999653 4788899999999999999999998 9999999999999999999999999987544332
Q ss_pred ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-ccccCCCCCCCHHHHHHH
Q 003978 660 LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM-NQRLEIPKDVDPRWAAIV 738 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~-~~~~~~p~~~~~~l~~LI 738 (782)
.......+++.|++||.+.+..++.++|||||||++|+|++|..||...+.......+... ......+..++..+++||
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 249 (297)
T cd06656 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFL 249 (297)
T ss_pred cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHH
Confidence 2233456889999999999988999999999999999999999999776554332222111 112234567889999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 739 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 739 ~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
.+||..||++||++.++ +.|+||+..+..
T Consensus 250 ~~~l~~~p~~Rps~~~i------l~~~~~~~~~~~ 278 (297)
T cd06656 250 NRCLEMDVDRRGSAKEL------LQHPFLKLAKPL 278 (297)
T ss_pred HHHccCChhhCcCHHHH------hcCchhcccccc
Confidence 99999999999999999 678999866554
No 226
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=9.9e-37 Score=321.25 Aligned_cols=255 Identities=31% Similarity=0.577 Sum_probs=214.6
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEE-cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVW-YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~-~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
|++..++|++.++||+|+||.||++.. .+..+++|.+.... .....+.+|+++++.++|+||+++++.+.. ...+
T Consensus 1 ~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~ 76 (260)
T cd05073 1 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIY 76 (260)
T ss_pred CcccccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh---hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeE
Confidence 567788999999999999999999986 44569999876432 234678889999999999999999999887 7789
Q ss_pred EEEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 579 IVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
++|||+++++|.+++... ...+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++.....
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 154 (260)
T cd05073 77 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASLVCKIADFGLARVIED 154 (260)
T ss_pred EEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC--ccccccCcceEEEcCCCcEEECCCcceeeccC
Confidence 999999999999999753 345788889999999999999999988 99999999999999999999999999875443
Q ss_pred ccc-cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHH
Q 003978 658 TYL-TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWA 735 (782)
Q Consensus 658 ~~~-~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~ 735 (782)
... ......++..|+|||++.+..++.++|||||||++|+|++ |..||...+.......+. .......+...+.++.
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 233 (260)
T cd05073 155 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE-RGYRMPRPENCPEELY 233 (260)
T ss_pred CCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh-CCCCCCCcccCCHHHH
Confidence 221 1222345678999999998889999999999999999998 999998877766555443 2223445567889999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKLRD 761 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L~~ 761 (782)
+++.+||..+|++||++.++++.|+.
T Consensus 234 ~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 234 NIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HHHHHHcccCcccCcCHHHHHHHHhc
Confidence 99999999999999999999988875
No 227
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=9e-37 Score=334.33 Aligned_cols=263 Identities=32% Similarity=0.586 Sum_probs=220.1
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEcC---------CeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEE
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYG---------SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLF 567 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~---------~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l 567 (782)
..|+....+|++++.||+|+||.||++.+.+ ..||+|+++.. ........+.+|+++++.+ +||||+++
T Consensus 5 ~~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~ 83 (334)
T cd05100 5 PKWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLVSEMEMMKMIGKHKNIINL 83 (334)
T ss_pred cccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHHHHHHHHHhhcCCCCeeee
Confidence 3566777789999999999999999997522 25899987643 2344567888999999999 79999999
Q ss_pred eeeeecCCceeEEEeecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCC
Q 003978 568 MGAVTSPQRLCIVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLK 632 (782)
Q Consensus 568 ~~~~~~~~~~~lv~E~~~ggsL~~~l~~~~---------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIK 632 (782)
++++...+.+|++|||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+|||||
T Consensus 84 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g--ivH~dlk 161 (334)
T cd05100 84 LGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK--CIHRDLA 161 (334)
T ss_pred eEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC--eeccccc
Confidence 999999999999999999999999996532 24678888999999999999999998 9999999
Q ss_pred CCcEEEcCCCcEEEEecCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCC
Q 003978 633 SSNLLVDKHWTVKVGDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLN 709 (782)
Q Consensus 633 p~NILl~~~~~vkL~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~ 709 (782)
|+|||++.++.+||+|||+++....... ......++..|+|||++.+..++.++|||||||++|+|++ |..||...+
T Consensus 162 p~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 241 (334)
T cd05100 162 ARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP 241 (334)
T ss_pred cceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC
Confidence 9999999999999999999875543221 1222344678999999999999999999999999999998 899998887
Q ss_pred hHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 710 SMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 710 ~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
.......+. .......+..++.++.+||.+||..+|.+||++.++++.|+++..
T Consensus 242 ~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 242 VEELFKLLK-EGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred HHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 766655543 223445667788999999999999999999999999999988863
No 228
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.3e-36 Score=317.75 Aligned_cols=246 Identities=30% Similarity=0.570 Sum_probs=208.5
Q ss_pred eeeccCCcEEEEEEEE-cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCCCCH
Q 003978 511 EQIGQGSCGTVYHAVW-YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSL 589 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~-~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ggsL 589 (782)
++||+|+||.||++.. .+..+|+|++.... .......+.+|+++++.++||||+++++++......++||||+++++|
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 79 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDL-PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDF 79 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence 3689999999999986 45679999886543 344455788999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc-cCCCCC
Q 003978 590 FRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT-KTGKGT 668 (782)
Q Consensus 590 ~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~-~~~~Gt 668 (782)
.+++......+++..++.++.|++.+|.|||+++ ++|+||||+||+++.++.+||+|||++.......... ....++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 157 (250)
T cd05085 80 LSFLRKKKDELKTKQLVKFALDAAAGMAYLESKN--CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIP 157 (250)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCc
Confidence 9999766667889999999999999999999998 9999999999999999999999999987543322111 122346
Q ss_pred CcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCC
Q 003978 669 PQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQ 747 (782)
Q Consensus 669 ~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~ 747 (782)
+.|+|||++.+..++.++|||||||++|+|++ |..||...........+. .......+..++..+.+|+.+||..+|+
T Consensus 158 ~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 236 (250)
T cd05085 158 IKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVE-KGYRMSCPQKCPDDVYKVMQRCWDYKPE 236 (250)
T ss_pred ccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHHcccCcc
Confidence 77999999998889999999999999999998 999998877666555543 2334456677899999999999999999
Q ss_pred CCCCHHHHHHHHH
Q 003978 748 CRPSFQELVDKLR 760 (782)
Q Consensus 748 ~RPs~~ell~~L~ 760 (782)
+||++.++++.|.
T Consensus 237 ~Rp~~~~l~~~l~ 249 (250)
T cd05085 237 NRPKFSELQKELA 249 (250)
T ss_pred cCCCHHHHHHHhc
Confidence 9999999988764
No 229
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.3e-36 Score=323.69 Aligned_cols=259 Identities=29% Similarity=0.487 Sum_probs=216.3
Q ss_pred cccceeEeeeeccCCcEEEEEEEEcC------CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec-CC
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWYG------SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS-PQ 575 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~~------~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-~~ 575 (782)
..++|++.+.||+|+||.||+|.+.. ..|++|.+... ........+.+|+.+++.+.||||+++++++.. +.
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH-ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE 82 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 45789999999999999999998754 56899987643 344556778899999999999999999998765 56
Q ss_pred ceeEEEeecCCCCHHHHHhhcC-------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEe
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNT-------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGD 648 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~-------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~D 648 (782)
..+++++|+.+++|.+++.... ..+++..++.++.||+.||.|||+++ ++|+||||+||+++.++.+||+|
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG--VIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccCHhhEEEcCCCcEEECC
Confidence 7899999999999999996532 45889999999999999999999998 99999999999999999999999
Q ss_pred cCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccC
Q 003978 649 FGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLE 725 (782)
Q Consensus 649 FGla~~~~~~~~--~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~ 725 (782)
||+++....... ......++..|+|||++.+..++.++|||||||++|++++ |+.||...+.......+.. .....
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~ 239 (280)
T cd05043 161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKD-GYRLA 239 (280)
T ss_pred CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHc-CCCCC
Confidence 999975432211 1122345778999999999889999999999999999999 9999988776665544432 22334
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003978 726 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 765 (782)
Q Consensus 726 ~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~ 765 (782)
.+..+++++.+++.+||..||++|||+.++++.|.++...
T Consensus 240 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 240 QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 4556789999999999999999999999999999988653
No 230
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.1e-36 Score=319.54 Aligned_cols=249 Identities=29% Similarity=0.466 Sum_probs=214.0
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec--CCceeEEE
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS--PQRLCIVT 581 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~~~~~lv~ 581 (782)
+|++.+.||.|+||.||++.+ .+..||+|++..........+.+..|+++++.++||||+++++++.. ...+|++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 588999999999999999987 56779999998766666667788899999999999999999997753 45689999
Q ss_pred eecCCCCHHHHHhhc---CCcchHHHHHHHHHHHHHHHHhhh-----cCCCCeeecCCCCCcEEEcCCCcEEEEecCCCc
Q 003978 582 EFLPRGSLFRLLQRN---TTKLDWRRRILMALDIARGVSYLH-----HCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 653 (782)
Q Consensus 582 E~~~ggsL~~~l~~~---~~~l~~~~~~~i~~qll~aL~~LH-----~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~ 653 (782)
||+++++|.+++... ..++++..++.++.||+.||.||| +.+ |+|+||||+||+++.++.+||+|||++.
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~--i~h~dl~p~nili~~~~~~kl~d~g~~~ 158 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT--VLHRDLKPANIFLDANNNVKLGDFGLAK 158 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc--ceecCCCHHHEEEecCCCEEEecccccc
Confidence 999999999999653 456899999999999999999999 777 9999999999999999999999999988
Q ss_pred ccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHH
Q 003978 654 LKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPR 733 (782)
Q Consensus 654 ~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~ 733 (782)
.............|++.|++||.+.+..++.++|+||||+++|+|++|..||...+.......+. ......++..++..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 237 (265)
T cd08217 159 ILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIK-EGKFRRIPYRYSSE 237 (265)
T ss_pred cccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHh-cCCCCCCccccCHH
Confidence 66544332334578999999999999889999999999999999999999999877555554443 22334567788999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHH
Q 003978 734 WAAIVESCWHSDPQCRPSFQELVD 757 (782)
Q Consensus 734 l~~LI~~cL~~dP~~RPs~~ell~ 757 (782)
+.+++.+||..+|.+||++.++++
T Consensus 238 ~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 238 LNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred HHHHHHHHccCCcccCCCHHHHhh
Confidence 999999999999999999999954
No 231
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.2e-37 Score=328.49 Aligned_cols=258 Identities=23% Similarity=0.436 Sum_probs=214.5
Q ss_pred cceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
++|++++.||+|+||.||++... +..||+|.++.. ........+.+|+.+++.++||||+++++.+..++.+|+|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLE-LDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCME 79 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecc-cCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEe
Confidence 36889999999999999999984 778999988654 234445678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhc--CCcchHHHHHHHHHHHHHHHHhhhc-CCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 583 FLPRGSLFRLLQRN--TTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 583 ~~~ggsL~~~l~~~--~~~l~~~~~~~i~~qll~aL~~LH~-~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
|+++++|..++... ...+++..+..++.||+.||.|||+ ++ |+|+||||+||+++.++.+||+|||++.......
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (286)
T cd06622 80 YMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN--IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL 157 (286)
T ss_pred ecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC--EeeCCCCHHHEEECCCCCEEEeecCCcccccCCc
Confidence 99999999998753 2368999999999999999999996 47 9999999999999999999999999987553322
Q ss_pred ccccCCCCCCcccCcccccCCC------CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhc--cccccCCCCCCC
Q 003978 660 LTTKTGKGTPQWMAPEVLRNEP------SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGF--MNQRLEIPKDVD 731 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~~~~------~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~--~~~~~~~p~~~~ 731 (782)
.....+++.|+|||.+.+.. ++.++|||||||++|+|++|..||...........+.. ......++..++
T Consensus 158 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd06622 158 --AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYS 235 (286)
T ss_pred --cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccC
Confidence 23446888999999986543 47899999999999999999999976655443333221 223455677799
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 732 PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 732 ~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
.++.+||.+||..+|++||++.++ +.++||...+..
T Consensus 236 ~~~~~li~~~l~~~p~~Rp~~~~l------~~~~~~~~~~~~ 271 (286)
T cd06622 236 DDAQDFVAKCLNKIPNRRPTYAQL------LEHPWLVKYKNA 271 (286)
T ss_pred HHHHHHHHHHcccCcccCCCHHHH------hcChhhhhccCC
Confidence 999999999999999999999999 567888665544
No 232
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=7.8e-37 Score=326.96 Aligned_cols=254 Identities=28% Similarity=0.513 Sum_probs=212.9
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc-------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY-------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~-------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
..++|++.+.||+|+||.||++... +..||+|++.... .......+.+|+.+++.+.||||+++++++..+.
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc-CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC
Confidence 3468999999999999999999863 4569999986433 3445567889999999999999999999999999
Q ss_pred ceeEEEeecCCCCHHHHHhhcC---------------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNT---------------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSS 634 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~---------------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~ 634 (782)
..|++|||+++++|.+++.... ..+++..++.++.||+.||.|||.++ ++|+||||+
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~--i~H~dl~p~ 159 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK--FVHRDLATR 159 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC--eecccccHh
Confidence 9999999999999999996432 24678889999999999999999998 999999999
Q ss_pred cEEEcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChH
Q 003978 635 NLLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSM 711 (782)
Q Consensus 635 NILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~ 711 (782)
||+++.++.++|+|||++....... .......++..|+|||.+.+..++.++|||||||++|+|++ |..||......
T Consensus 160 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~ 239 (288)
T cd05050 160 NCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE 239 (288)
T ss_pred heEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 9999999999999999987543221 11223345678999999998889999999999999999997 88999887776
Q ss_pred HHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003978 712 QVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLR 760 (782)
Q Consensus 712 ~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~ 760 (782)
+....+.. ......+..++.++.+||.+||..||.+||++.++++.|+
T Consensus 240 ~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 240 EVIYYVRD-GNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred HHHHHHhc-CCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 66555432 2233456678999999999999999999999999998875
No 233
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=5.1e-37 Score=332.18 Aligned_cols=263 Identities=26% Similarity=0.337 Sum_probs=214.4
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC--CceeE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP--QRLCI 579 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~~l 579 (782)
.++|++.+.||+|+||.||++.. .+..||+|+++...........+.+|+.+++.++|+||+++++++... +.+|+
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 46899999999999999999987 477899999876543333334456799999999999999999998754 46899
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
||||+. ++|.+++......+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++.......
T Consensus 86 v~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~ 162 (309)
T cd07845 86 VMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENF--IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA 162 (309)
T ss_pred EEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEECccceeeecCCcc
Confidence 999995 5899998776667899999999999999999999999 9999999999999999999999999987654432
Q ss_pred ccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc----------------
Q 003978 660 LTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ---------------- 722 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~---------------- 722 (782)
.......+++.|+|||++.+ ..++.++|||||||++|+|++|..||...+....+..+.....
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
T cd07845 163 KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLV 242 (309)
T ss_pred CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccccc
Confidence 22223346888999999876 4578999999999999999999999988877665544432110
Q ss_pred -ccCC-----------CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcCC
Q 003978 723 -RLEI-----------PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVG 775 (782)
Q Consensus 723 -~~~~-----------p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~~ 775 (782)
...+ ....++++.+||.+||..||++|||+.++ +.|+||+.....+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~i------l~h~~f~~~~~~~~ 301 (309)
T cd07845 243 GKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEA------LESSYFKEKPLPCE 301 (309)
T ss_pred ccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHH------hcChhhccCCCCCC
Confidence 0000 12357889999999999999999999999 67899987766544
No 234
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.5e-36 Score=323.27 Aligned_cols=256 Identities=29% Similarity=0.557 Sum_probs=217.6
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc--CC----eEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY--GS----DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~--~~----~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
..+|++.+.||+|+||.||+|... +. .+|+|.+..... ......+.+|+.+++.++||||+++++++.. ...
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 83 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS-PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQV 83 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cce
Confidence 468999999999999999999863 22 488998765443 4455778899999999999999999999887 788
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
+++|||+.+++|.+++......+++..++.++.||+.||+|||+++ |+|+||||+||+++.++.+||+|||+++....
T Consensus 84 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 84 QLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred EEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--EEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 9999999999999999877667999999999999999999999988 99999999999999999999999999976543
Q ss_pred ccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHH
Q 003978 658 TYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 734 (782)
Q Consensus 658 ~~~--~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l 734 (782)
... ......++..|++||.+.+..++.++|||||||++|+|++ |..||...........+. .......+..++.++
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 240 (279)
T cd05057 162 DEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLE-KGERLPQPPICTIDV 240 (279)
T ss_pred cccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHh-CCCCCCCCCCCCHHH
Confidence 211 1112234678999999988889999999999999999998 999999887766555553 333455667788999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 735 AAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 735 ~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
.+++.+||..||.+||++.++++.|+++.+
T Consensus 241 ~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 241 YMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred HHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 999999999999999999999999998855
No 235
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=3.1e-37 Score=325.02 Aligned_cols=253 Identities=29% Similarity=0.501 Sum_probs=213.5
Q ss_pred cceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
++|++.+.||.|+||.||++.+. ++.+++|.+..... ......+.+|+++++.+.||||+++++.+...+.++++||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN-EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICME 79 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEE
Confidence 36788899999999999999985 67899999876543 3455678889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhc-CCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~-~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
|+.+++|.+++......+++..+..++.|++.||+|||+ .+ ++|+||||+||+++.++.++|+|||.+.........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~--i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~ 157 (265)
T cd06605 80 YMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHK--IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK 157 (265)
T ss_pred ecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCC--eecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh
Confidence 999999999998765678999999999999999999999 88 999999999999999999999999998655332221
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC-----hHHHHHHhhccccccCCCCC-CCHHHH
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN-----SMQVIGAVGFMNQRLEIPKD-VDPRWA 735 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~-----~~~~~~~i~~~~~~~~~p~~-~~~~l~ 735 (782)
...++..|+|||.+.+..++.++|||||||++|+|++|..||.... .......+. ....+.++.. ++.++.
T Consensus 158 --~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 234 (265)
T cd06605 158 --TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIV-NEPPPRLPSGKFSPDFQ 234 (265)
T ss_pred --cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHh-cCCCCCCChhhcCHHHH
Confidence 2578899999999999999999999999999999999999997652 222222221 1223334444 889999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
+||.+||..||++|||+.++ +.++||+.
T Consensus 235 ~li~~~l~~~p~~Rpt~~~l------l~~~~~~~ 262 (265)
T cd06605 235 DFVNLCLIKDPRERPSYKEL------LEHPFIKK 262 (265)
T ss_pred HHHHHHcCCCchhCcCHHHH------hhCchhhc
Confidence 99999999999999999999 67899864
No 236
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=9.8e-37 Score=327.91 Aligned_cols=254 Identities=32% Similarity=0.539 Sum_probs=208.3
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc------------------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcee
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY------------------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVL 565 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~------------------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv 565 (782)
.++|++.++||+|+||.||++.+. +..+|+|++.... .......+.+|+.+++.++|+||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~E~~~l~~l~~~~i~ 82 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-NKNARNDFLKEIKIMSRLKDPNII 82 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcc
Confidence 467999999999999999998643 2248999886543 344556788999999999999999
Q ss_pred EEeeeeecCCceeEEEeecCCCCHHHHHhhcC----------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCc
Q 003978 566 LFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNT----------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSN 635 (782)
Q Consensus 566 ~l~~~~~~~~~~~lv~E~~~ggsL~~~l~~~~----------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~N 635 (782)
++++++......|++|||+.+++|.+++.... ..+++..++.++.||+.||+|||+++ |+|+||||+|
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~H~dlkp~N 160 (296)
T cd05095 83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN--FVHRDLATRN 160 (296)
T ss_pred eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC--eecccCChhe
Confidence 99999999999999999999999999996532 23667889999999999999999998 9999999999
Q ss_pred EEEcCCCcEEEEecCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc--CCCCCCCCChH
Q 003978 636 LLVDKHWTVKVGDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT--EKIPWDNLNSM 711 (782)
Q Consensus 636 ILl~~~~~vkL~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt--G~~Pf~~~~~~ 711 (782)
||++.++.++|+|||++........ ......+++.|++||+..+..++.++|||||||++|||++ |..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE 240 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence 9999999999999999875433211 1112234678999999888889999999999999999998 78999877665
Q ss_pred HHHHHhhc------cccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003978 712 QVIGAVGF------MNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLR 760 (782)
Q Consensus 712 ~~~~~i~~------~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~ 760 (782)
+....... .......+..+++.+.+||.+||..||.+||++.++++.|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 241 QVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 54433211 11123345668899999999999999999999999998875
No 237
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.7e-36 Score=317.94 Aligned_cols=249 Identities=33% Similarity=0.621 Sum_probs=212.1
Q ss_pred cceeEeeeeccCCcEEEEEEEEc-CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY-GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~-~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
.+|++.+.||.|+||.||++.+. +..+|+|++....... ..+.+|+++++.+.||||+++++++......|++|||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~---~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSE---EDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEF 80 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCH---HHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEc
Confidence 57899999999999999999875 6789999987654433 4577899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc-c
Q 003978 584 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT-T 662 (782)
Q Consensus 584 ~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~-~ 662 (782)
+.+++|.+++......+++..++.++.|++.+|.|||+.+ ++|+||||+||+++.++.++|+|||++......... .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~ 158 (256)
T cd05112 81 MEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSN--VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSS 158 (256)
T ss_pred CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccccceEEEcCCCeEEECCCcceeecccCccccc
Confidence 9999999999876667899999999999999999999998 999999999999999999999999998754332211 1
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHh
Q 003978 663 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 741 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~c 741 (782)
....++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+.. ......+...+..+.+|+.+|
T Consensus 159 ~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~ 237 (256)
T cd05112 159 TGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINA-GFRLYKPRLASQSVYELMQHC 237 (256)
T ss_pred CCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhC-CCCCCCCCCCCHHHHHHHHHH
Confidence 12235678999999998889999999999999999998 9999987776665555432 223344566889999999999
Q ss_pred hhhCCCCCCCHHHHHHHH
Q 003978 742 WHSDPQCRPSFQELVDKL 759 (782)
Q Consensus 742 L~~dP~~RPs~~ell~~L 759 (782)
|..+|++||++.++++.|
T Consensus 238 l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 238 WKERPEDRPSFSLLLHQL 255 (256)
T ss_pred cccChhhCCCHHHHHHhh
Confidence 999999999999998876
No 238
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.4e-36 Score=317.74 Aligned_cols=246 Identities=33% Similarity=0.592 Sum_probs=209.0
Q ss_pred eeeccCCcEEEEEEEEc-CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCCCCH
Q 003978 511 EQIGQGSCGTVYHAVWY-GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSL 589 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~~-~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ggsL 589 (782)
++||+|+||.||++... ++.|++|++...... .....+.+|+++++.++|+||+++++++......++||||+.+++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l 79 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL 79 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence 46999999999999875 788999998765443 4556788999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc--cCCCC
Q 003978 590 FRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT--KTGKG 667 (782)
Q Consensus 590 ~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~--~~~~G 667 (782)
.+++......+++..++.++.+++.+|.|||+++ ++|+||||+||+++.++.++|+|||++.......... ....+
T Consensus 80 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~--i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 157 (251)
T cd05041 80 LTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKN--CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI 157 (251)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--EehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcc
Confidence 9999766667889999999999999999999998 9999999999999999999999999987554221111 12234
Q ss_pred CCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCC
Q 003978 668 TPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDP 746 (782)
Q Consensus 668 t~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP 746 (782)
+..|+|||.+.+..++.++|||||||++|+|++ |..||...........+.. ......+..++.++.++|.+||..+|
T Consensus 158 ~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p 236 (251)
T cd05041 158 PIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIES-GYRMPAPQLCPEEIYRLMLQCWAYDP 236 (251)
T ss_pred eeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhc-CCCCCCCccCCHHHHHHHHHHhccCh
Confidence 567999999998889999999999999999999 8999987776555444432 23445567789999999999999999
Q ss_pred CCCCCHHHHHHHHH
Q 003978 747 QCRPSFQELVDKLR 760 (782)
Q Consensus 747 ~~RPs~~ell~~L~ 760 (782)
.+||++.++++.|+
T Consensus 237 ~~Rp~~~ell~~l~ 250 (251)
T cd05041 237 ENRPSFSEIYNELQ 250 (251)
T ss_pred hhCcCHHHHHHHhh
Confidence 99999999998875
No 239
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.2e-37 Score=324.90 Aligned_cols=249 Identities=28% Similarity=0.427 Sum_probs=205.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
.++|++.++||+|+||.||++.. .++.||+|+++.... .....+.+|+.+++.++||||+++++.+...+.+|++|
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~ 85 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG--EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICM 85 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Confidence 35889999999999999999987 467899999875432 23356778999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
||+++++|.+++.... .+++..++.++.|++.||.|||+++ |+|+||||+||+++.++.++|+|||++.........
T Consensus 86 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd06645 86 EFCGGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYLHSKG--KMHRDIKGANILLTDNGHVKLADFGVSAQITATIAK 162 (267)
T ss_pred eccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEECcceeeeEccCcccc
Confidence 9999999999987643 6899999999999999999999998 999999999999999999999999998755443333
Q ss_pred ccCCCCCCcccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccC-C--CCCCCHHHH
Q 003978 662 TKTGKGTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE-I--PKDVDPRWA 735 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~---~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~-~--p~~~~~~l~ 735 (782)
.....|++.|+|||++. ...++.++|||||||++|+|++|..||..................+. . ...++..+.
T Consensus 163 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (267)
T cd06645 163 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFH 242 (267)
T ss_pred cccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHH
Confidence 34557899999999974 45578899999999999999999999976654433322221111111 1 124678999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHH
Q 003978 736 AIVESCWHSDPQCRPSFQELVD 757 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~ 757 (782)
+||.+||..+|++||++.++++
T Consensus 243 ~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 243 HFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred HHHHHHccCCchhCcCHHHHhc
Confidence 9999999999999999999954
No 240
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=9.5e-37 Score=324.99 Aligned_cols=253 Identities=26% Similarity=0.359 Sum_probs=210.7
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
+|++.+.||.|+||.||+|.+ .++.|++|++............+.+|+.+++.++||||+++++++.....+|+||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 589999999999999999987 567899999987665455567788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc-cc
Q 003978 584 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL-TT 662 (782)
Q Consensus 584 ~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~-~~ 662 (782)
+ +++|.+++......+++..++.++.||+.||.|||+.+ |+|+||||+||+++.++.++|+|||++........ ..
T Consensus 81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 157 (286)
T cd07832 81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANG--IMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLY 157 (286)
T ss_pred c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCcc
Confidence 9 99999999776677999999999999999999999998 99999999999999999999999999876544321 12
Q ss_pred cCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc------------------
Q 003978 663 KTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR------------------ 723 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~~~-~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~------------------ 723 (782)
....|+..|+|||.+.+.. ++.++|||||||++|+|++|.+||...........+......
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T cd07832 158 SHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKI 237 (286)
T ss_pred ccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcc
Confidence 3456899999999987644 588999999999999999999888776654433322110000
Q ss_pred ----------cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 724 ----------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 724 ----------~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
....+..+..+.+||.+||..||.+||++.++ |.|+||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~------l~h~~~ 285 (286)
T cd07832 238 TFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEA------LRHPYF 285 (286)
T ss_pred cCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHH------hhCcCc
Confidence 01123567899999999999999999999999 566776
No 241
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.2e-36 Score=319.39 Aligned_cols=247 Identities=33% Similarity=0.609 Sum_probs=210.6
Q ss_pred cccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
..++|++.+.||+|+||.||++...++.||+|+++... ....+.+|+.+++.++||||+++++++..+ ..+++||
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e 78 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVME 78 (254)
T ss_pred cHHHceeeeeeccCCCCceEecccCCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEE
Confidence 34689999999999999999999999999999986432 235678899999999999999999998754 5799999
Q ss_pred ecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 583 FLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
|+.+++|.+++.... ..+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~-- 154 (254)
T cd05083 79 LMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK--LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV-- 154 (254)
T ss_pred CCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccCcceEEEcCCCcEEECCCccceeccccC--
Confidence 999999999997543 35789999999999999999999998 9999999999999999999999999987543321
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHH
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVES 740 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~ 740 (782)
.....+..|+|||.+.+..++.++|+|||||++|+|++ |..||...........+.. ...+..+..++..+.+||.+
T Consensus 155 -~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~ 232 (254)
T cd05083 155 -DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEK-GYRMEPPEGCPADVYVLMTS 232 (254)
T ss_pred -CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhC-CCCCCCCCcCCHHHHHHHHH
Confidence 12234678999999998889999999999999999997 9999988877665555432 23444566789999999999
Q ss_pred hhhhCCCCCCCHHHHHHHHH
Q 003978 741 CWHSDPQCRPSFQELVDKLR 760 (782)
Q Consensus 741 cL~~dP~~RPs~~ell~~L~ 760 (782)
||..+|++||++.++++.|+
T Consensus 233 ~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 233 CWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred HcCCChhhCcCHHHHHHHHc
Confidence 99999999999999988765
No 242
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-37 Score=310.50 Aligned_cols=255 Identities=26% Similarity=0.436 Sum_probs=209.8
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEcC--CeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCC
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYG--SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~--~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~ 575 (782)
.+....++++++..||.|+.|.|+++++.. .-.|||.+.+... .+..+++...+.++... +.|+||+++|+|..+.
T Consensus 86 r~~~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~N-kee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~ 164 (391)
T KOG0983|consen 86 RYQADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGN-KEENKRILMDLDVVLKSHDCPYIVQCFGYFITNT 164 (391)
T ss_pred ccccChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCC-HHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCc
Confidence 344556778889999999999999999855 6789999987654 34456677777766555 5899999999999999
Q ss_pred ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
.+++.||.| ..-+..++++-..++++..+-++...++.||.||.++. +||||||||+|||++..|+|||||||++...
T Consensus 165 dV~IcMelM-s~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH-~viHRDvKPSNILlDe~GniKlCDFGIsGrl 242 (391)
T KOG0983|consen 165 DVFICMELM-STCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKH-GVIHRDVKPSNILLDERGNIKLCDFGISGRL 242 (391)
T ss_pred hHHHHHHHH-HHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhc-ceeecccCccceEEccCCCEEeeccccccee
Confidence 999999999 44667777777778999999999999999999998642 4999999999999999999999999999877
Q ss_pred ccccccccCCCCCCcccCcccccC---CCCCchhHHHHHHHHHHHHHcCCCCCCCCC-hHHHHHHhhccccccCCCC--C
Q 003978 656 HETYLTTKTGKGTPQWMAPEVLRN---EPSDEKSDVYSFGVILWELATEKIPWDNLN-SMQVIGAVGFMNQRLEIPK--D 729 (782)
Q Consensus 656 ~~~~~~~~~~~Gt~~y~aPE~l~~---~~~s~~sDIwSLG~ll~elltG~~Pf~~~~-~~~~~~~i~~~~~~~~~p~--~ 729 (782)
.+....+ ...|-+.|||||.+.. ..|+.++||||||++++||.||..||...+ ..+++..+.. ..++.++. .
T Consensus 243 vdSkAht-rsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln-~ePP~L~~~~g 320 (391)
T KOG0983|consen 243 VDSKAHT-RSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN-EEPPLLPGHMG 320 (391)
T ss_pred ecccccc-cccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh-cCCCCCCcccC
Confidence 6655444 3468899999999964 467899999999999999999999998754 4566656543 22344443 4
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003978 730 VDPRWAAIVESCWHSDPQCRPSFQELVDK 758 (782)
Q Consensus 730 ~~~~l~~LI~~cL~~dP~~RPs~~ell~~ 758 (782)
+++.+.+|+..||.+|+.+||.+.+|+++
T Consensus 321 FSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 321 FSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred cCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 89999999999999999999999999543
No 243
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.8e-36 Score=321.19 Aligned_cols=248 Identities=31% Similarity=0.572 Sum_probs=205.5
Q ss_pred eeeccCCcEEEEEEEEcC--C--eEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCceeEEEeecC
Q 003978 511 EQIGQGSCGTVYHAVWYG--S--DVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIVTEFLP 585 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~~~--~--~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lv~E~~~ 585 (782)
+.||+|+||.||++...+ . .+++|.++.. ........+.+|+.++..+ +||||+++++++...+.+|++|||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc-CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence 368999999999998743 2 3678877632 2344456788999999999 79999999999999999999999999
Q ss_pred CCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecC
Q 003978 586 RGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFG 650 (782)
Q Consensus 586 ggsL~~~l~~~~---------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFG 650 (782)
+++|.+++.... ..+++..++.++.|++.||+|||+++ ++|+||||+|||++.++.+||+|||
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~--i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccccceEEEcCCCeEEECCCC
Confidence 999999996532 24788999999999999999999988 9999999999999999999999999
Q ss_pred CCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCC
Q 003978 651 LSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKD 729 (782)
Q Consensus 651 la~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~ 729 (782)
++...... ........++.|+|||++.+..++.++|||||||++|+|++ |..||...+.......+.. ......+..
T Consensus 158 l~~~~~~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~ 235 (270)
T cd05047 158 LSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-GYRLEKPLN 235 (270)
T ss_pred Cccccchh-hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhC-CCCCCCCCc
Confidence 98633221 11222334667999999998889999999999999999997 9999987776665554432 234456667
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003978 730 VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 763 (782)
Q Consensus 730 ~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~ 763 (782)
++.++.+|+.+||..||.+|||+.++++.|.++.
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 236 CDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 8899999999999999999999999999998774
No 244
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.3e-36 Score=320.26 Aligned_cols=247 Identities=24% Similarity=0.394 Sum_probs=213.6
Q ss_pred eccCCcEEEEEEEEc--CCeEEEEEEeccCCC-HHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCCCCH
Q 003978 513 IGQGSCGTVYHAVWY--GSDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSL 589 (782)
Q Consensus 513 IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ggsL 589 (782)
||.|+||.||++... +..|++|++.+.... ....+.+.+|+.+++.++||||+++++.+..+..+|++|||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999986 788999999765542 34557789999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCCCCC
Q 003978 590 FRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTP 669 (782)
Q Consensus 590 ~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~ 669 (782)
.+++.+.. .+++..+..++.||+.||.|||+++ ++|+||||+||+++.++.++|+|||++....... ......|++
T Consensus 81 ~~~l~~~~-~l~~~~~~~~~~~i~~~l~~lH~~~--~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~ 156 (262)
T cd05572 81 WTILRDRG-LFDEYTARFYIACVVLAFEYLHNRG--IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFCGTP 156 (262)
T ss_pred HHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-ccccccCCc
Confidence 99997643 5889999999999999999999998 9999999999999999999999999987654432 223446899
Q ss_pred cccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC--hHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCC
Q 003978 670 QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN--SMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQ 747 (782)
Q Consensus 670 ~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~--~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~ 747 (782)
.|++||.+.+..++.++|+|||||++|+|++|..||.... .......+........+|..+++++.+||.+||..||+
T Consensus 157 ~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~ 236 (262)
T cd05572 157 EYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPE 236 (262)
T ss_pred CccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChh
Confidence 9999999988889999999999999999999999998776 55555454433456667777899999999999999999
Q ss_pred CCCC-----HHHHHHHHHHHHHHHhhc
Q 003978 748 CRPS-----FQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 748 ~RPs-----~~ell~~L~~L~~~~~~~ 769 (782)
+||+ +.++ ++|+||+.
T Consensus 237 ~R~~~~~~~~~~l------~~~~~~~~ 257 (262)
T cd05572 237 ERLGNLKGGIKDI------KKHKWFNG 257 (262)
T ss_pred hCcCCcccCHHHH------hcChhhhC
Confidence 9999 8888 56899974
No 245
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.9e-36 Score=318.66 Aligned_cols=249 Identities=33% Similarity=0.563 Sum_probs=203.6
Q ss_pred eeeccCCcEEEEEEEEc-----CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeee-cCCceeEEEeec
Q 003978 511 EQIGQGSCGTVYHAVWY-----GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT-SPQRLCIVTEFL 584 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~~-----~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~-~~~~~~lv~E~~ 584 (782)
+.||+|+||.||+|... ...||||.+.... .......+.+|+.+++.++||||+++++++. .++..+++|||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 79 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT-DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYM 79 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC-CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecC
Confidence 36899999999999863 2358999875432 3344577888999999999999999999765 455689999999
Q ss_pred CCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc----c
Q 003978 585 PRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY----L 660 (782)
Q Consensus 585 ~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~----~ 660 (782)
.+++|.+++......+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||+++...... .
T Consensus 80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 157 (262)
T cd05058 80 KHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKK--FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH 157 (262)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccCcceEEEcCCCcEEECCccccccccCCcceeec
Confidence 999999999776556777888899999999999999988 9999999999999999999999999987543211 1
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHH
Q 003978 661 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVE 739 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~ 739 (782)
......+++.|+|||.+.+..++.++|||||||++|||++ |.+||...+.......+. ....+..+..++..+.+++.
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~ 236 (262)
T cd05058 158 NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLL-QGRRLLQPEYCPDPLYEVML 236 (262)
T ss_pred ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh-cCCCCCCCCcCCHHHHHHHH
Confidence 1123346778999999988889999999999999999999 567787766655544442 22334455668899999999
Q ss_pred HhhhhCCCCCCCHHHHHHHHHHHH
Q 003978 740 SCWHSDPQCRPSFQELVDKLRDLQ 763 (782)
Q Consensus 740 ~cL~~dP~~RPs~~ell~~L~~L~ 763 (782)
+||..+|++||++.++++.|+++.
T Consensus 237 ~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 237 SCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred HHcCCChhhCCCHHHHHHHHHHHh
Confidence 999999999999999999988775
No 246
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2.4e-36 Score=322.37 Aligned_cols=254 Identities=34% Similarity=0.554 Sum_probs=205.5
Q ss_pred cceeEeeeeccCCcEEEEEEEE------cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec--CCc
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW------YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS--PQR 576 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~------~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~~~ 576 (782)
.+|++.+.||+|+||.||++.+ .+..||||.+.... ....+.+.+|+++++.++||||+++++++.. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST--AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 81 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCc
Confidence 4789999999999999999975 36679999986442 4445778899999999999999999997643 346
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
+++||||+++++|.+++......+++..++.++.||+.||+|||+++ |+|+||||+||+|+.++.+||+|||++....
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~--i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 82 LRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKR--YVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred eEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 89999999999999999776667899999999999999999999998 9999999999999999999999999998654
Q ss_pred cccc---cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHH---------------HHHhh
Q 003978 657 ETYL---TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQV---------------IGAVG 718 (782)
Q Consensus 657 ~~~~---~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~---------------~~~i~ 718 (782)
.... ......++..|+|||++.+..++.++|||||||++|||++|..|+........ ...+.
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05081 160 QDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELL 239 (284)
T ss_pred CCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHH
Confidence 3211 11122345569999999998899999999999999999998777643321100 00111
Q ss_pred ccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 719 FMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 719 ~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
........+..++.++.+||.+||..+|++|||+.++++.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 240 KNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred hcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 11123344567889999999999999999999999999998865
No 247
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.9e-36 Score=319.77 Aligned_cols=248 Identities=31% Similarity=0.515 Sum_probs=207.2
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC---CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC--Cce
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY---SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP--QRL 577 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~---~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~ 577 (782)
.+|++.+.||+|+||.||++.. .++.|+||.+..... .......+.+|+.+++.++||||+++++++... ..+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4799999999999999999987 467899998864322 234567889999999999999999999988653 467
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
+++|||+++++|.+++... ..+++..++.++.|++.||.|||+++ |+|+||||+||+++.++.++|+|||++.....
T Consensus 82 ~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~ 158 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY-GALTENVTRKYTRQILEGVSYLHSNM--IVHRDIKGANILRDSVGNVKLGDFGASKRLQT 158 (265)
T ss_pred EEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEecCCCCEEECcCcccccccc
Confidence 8999999999999999764 35788889999999999999999998 99999999999999999999999999875432
Q ss_pred cc---ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHH
Q 003978 658 TY---LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 734 (782)
Q Consensus 658 ~~---~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l 734 (782)
.. .......|+..|+|||++.+..++.++|||||||++|+|++|..||...........+........+|..++..+
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (265)
T cd06652 159 ICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHC 238 (265)
T ss_pred ccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHH
Confidence 11 112234588999999999988889999999999999999999999987765555444433333455677788899
Q ss_pred HHHHHHhhhhCCCCCCCHHHHH
Q 003978 735 AAIVESCWHSDPQCRPSFQELV 756 (782)
Q Consensus 735 ~~LI~~cL~~dP~~RPs~~ell 756 (782)
.++|.+||. +|.+||++.+++
T Consensus 239 ~~~i~~~l~-~p~~Rp~~~~il 259 (265)
T cd06652 239 RDFLKRIFV-EAKLRPSADELL 259 (265)
T ss_pred HHHHHHHhc-ChhhCCCHHHHh
Confidence 999999995 999999999994
No 248
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.2e-36 Score=318.80 Aligned_cols=248 Identities=33% Similarity=0.572 Sum_probs=213.4
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC---CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY---SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~---~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
+|+..+.||+|+||.||+|.. .+..|++|.+..... ..+..+.+.+|+.+++.++|+||+++++++.....+|++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 477789999999999999987 477899999865432 245567889999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 660 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 660 (782)
|||+++++|.+++.... .+++..++.++.||+.||.|||+.+ |+|+||||+||+++.++.+||+|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~- 156 (258)
T cd06632 81 LELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLHDRN--TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS- 156 (258)
T ss_pred EEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEccCccceeccccc-
Confidence 99999999999997653 5889999999999999999999998 9999999999999999999999999987654332
Q ss_pred cccCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHH
Q 003978 661 TTKTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVE 739 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~~~~-~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~ 739 (782)
......|++.|++||.+.... ++.++|+|||||++|+|++|..||...........+........++..+++.+.+||.
T Consensus 157 ~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 236 (258)
T cd06632 157 FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFIL 236 (258)
T ss_pred cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHH
Confidence 223456899999999988776 8899999999999999999999998777655555554434455677789999999999
Q ss_pred HhhhhCCCCCCCHHHHHH
Q 003978 740 SCWHSDPQCRPSFQELVD 757 (782)
Q Consensus 740 ~cL~~dP~~RPs~~ell~ 757 (782)
+||..+|.+||++.+++.
T Consensus 237 ~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 237 KCLQRDPSLRPTAAELLE 254 (258)
T ss_pred HHhhcCcccCcCHHHHhc
Confidence 999999999999999953
No 249
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.4e-36 Score=324.14 Aligned_cols=253 Identities=28% Similarity=0.440 Sum_probs=204.8
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeee-----
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVT----- 572 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~----- 572 (782)
....++|++.+.||+|+||.||++.. .++.+|+|++..... ....+.+|+.+++.+ +||||+++++++.
T Consensus 14 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~---~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 90 (286)
T cd06638 14 PDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD---IDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVK 90 (286)
T ss_pred CCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc---hHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccC
Confidence 34567999999999999999999987 467899998764322 224577899999999 6999999999873
Q ss_pred cCCceeEEEeecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEec
Q 003978 573 SPQRLCIVTEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDF 649 (782)
Q Consensus 573 ~~~~~~lv~E~~~ggsL~~~l~~---~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DF 649 (782)
....+++||||+++++|.+++.. ....+++..++.++.|++.||.|||+++ |+|+||||+||+++.++.+||+||
T Consensus 91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nili~~~~~~kl~df 168 (286)
T cd06638 91 NGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK--TIHRDVKGNNILLTTEGGVKLVDF 168 (286)
T ss_pred CCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC--ccccCCCHHhEEECCCCCEEEccC
Confidence 34568999999999999998753 2346888899999999999999999988 999999999999999999999999
Q ss_pred CCCcccccccccccCCCCCCcccCcccccC-----CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-cc
Q 003978 650 GLSRLKHETYLTTKTGKGTPQWMAPEVLRN-----EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN-QR 723 (782)
Q Consensus 650 Gla~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~-~~ 723 (782)
|++..............|++.|+|||++.+ ..++.++|||||||++|+|++|..||...........+.... ..
T Consensus 169 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 248 (286)
T cd06638 169 GVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPT 248 (286)
T ss_pred CceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCc
Confidence 998765443333334578999999999853 446889999999999999999999998776544433322111 12
Q ss_pred cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003978 724 LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDK 758 (782)
Q Consensus 724 ~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~ 758 (782)
...+..++..+.+||.+||..||++|||+.+++++
T Consensus 249 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 249 LHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred ccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 22445678899999999999999999999999543
No 250
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=6.8e-37 Score=325.53 Aligned_cols=252 Identities=31% Similarity=0.528 Sum_probs=212.2
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
+.|+..+.||.|+||.||+|.+ .+..||+|++..... ......+.+|+.+++.++||||+++++.+..++..|+|||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIME 82 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc-hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEE
Confidence 4577788999999999999987 466799999865432 3455788999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
|+++++|.+++.. ..+++..+..++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++..........
T Consensus 83 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~--ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06642 83 YLGGGSALDLLKP--GPLEETYIATILREILKGLDYLHSER--KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR 158 (277)
T ss_pred ccCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCC--eeccCCChheEEEeCCCCEEEccccccccccCcchhh
Confidence 9999999999864 35889999999999999999999988 9999999999999999999999999987654433333
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhh
Q 003978 663 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCW 742 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL 742 (782)
....|+..|+|||.+.+..++.++|+|||||++|+|++|..||...........+. ......++..++.++.+||.+||
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l 237 (277)
T cd06642 159 NTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIP-KNSPPTLEGQYSKPFKEFVEACL 237 (277)
T ss_pred hcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhh-cCCCCCCCcccCHHHHHHHHHHc
Confidence 34468899999999999889999999999999999999999998766554443332 12233455568899999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003978 743 HSDPQCRPSFQELVDKLRDLQRQYFQ 768 (782)
Q Consensus 743 ~~dP~~RPs~~ell~~L~~L~~~~~~ 768 (782)
..+|++||++.+++ .|+||+
T Consensus 238 ~~~p~~Rp~~~~il------~~~~~~ 257 (277)
T cd06642 238 NKDPRFRPTAKELL------KHKFIT 257 (277)
T ss_pred cCCcccCcCHHHHH------HhHHHH
Confidence 99999999999995 456664
No 251
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.7e-36 Score=317.43 Aligned_cols=248 Identities=27% Similarity=0.440 Sum_probs=212.5
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
+|++.+.||+|+||.||++.. .+..+|||.+............+.+|+++++.++||||+++++.+...+.+++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 588999999999999999987 566799999987665556678899999999999999999999999989999999999
Q ss_pred cCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC-CcEEEEecCCCccccccccc
Q 003978 584 LPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH-WTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 584 ~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~-~~vkL~DFGla~~~~~~~~~ 661 (782)
+++++|.+++... ...+++..++.++.+++.+|+|||+++ |+|+||||+||+++.+ +.+||+|||++....... .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~-~ 157 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL--ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS-K 157 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-c
Confidence 9999999999764 345889999999999999999999998 9999999999999865 458999999987654432 2
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHh
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 741 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~c 741 (782)
.....|++.|+|||.+.+..++.++||||||+++|+|++|..||...+.......+.. .....++..++.++.++|.+|
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~ 236 (256)
T cd08220 158 AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMS-GTFAPISDRYSPDLRQLILSM 236 (256)
T ss_pred ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHh-cCCCCCCCCcCHHHHHHHHHH
Confidence 2235688999999999988889999999999999999999999987766554444422 223456677899999999999
Q ss_pred hhhCCCCCCCHHHHHH
Q 003978 742 WHSDPQCRPSFQELVD 757 (782)
Q Consensus 742 L~~dP~~RPs~~ell~ 757 (782)
|..+|.+|||+.++++
T Consensus 237 l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 237 LNLDPSKRPQLSQIMA 252 (256)
T ss_pred ccCChhhCCCHHHHhh
Confidence 9999999999999943
No 252
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-39 Score=375.07 Aligned_cols=258 Identities=28% Similarity=0.481 Sum_probs=221.0
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
+|.-+.+||.|.||.||.+.. +|.-.|+|-++.+.........+.+|..+|..++|||+|++||+-.+.+.++|.|||
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEy 1315 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEY 1315 (1509)
T ss_pred eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHH
Confidence 677788999999999999986 677789999877666666677888999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc----
Q 003978 584 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY---- 659 (782)
Q Consensus 584 ~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~---- 659 (782)
|.+|+|.+.+... +-.++.....+..|++.|++|||++| ||||||||+||+++.+|.+|++|||.|.......
T Consensus 1316 C~~GsLa~ll~~g-ri~dE~vt~vyt~qll~gla~LH~~g--IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~ 1392 (1509)
T KOG4645|consen 1316 CEGGSLASLLEHG-RIEDEMVTRVYTKQLLEGLAYLHEHG--IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMP 1392 (1509)
T ss_pred hccCcHHHHHHhc-chhhhhHHHHHHHHHHHHHHHHHhcC--ceecCCCccceeeecCCcEEeecccceeEecCchhcCC
Confidence 9999999999753 45677777788899999999999999 9999999999999999999999999998655432
Q ss_pred ccccCCCCCCcccCcccccCCC---CCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhhccccccCCCCCCCHHHH
Q 003978 660 LTTKTGKGTPQWMAPEVLRNEP---SDEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAVGFMNQRLEIPKDVDPRWA 735 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~~~~---~s~~sDIwSLG~ll~elltG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~~l~ 735 (782)
......+||+.|||||++.+.. ...+.||||||||+.||+||+.||..++.. +.+..+ .+...+.+|..++.+-+
T Consensus 1393 ~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V-~~gh~Pq~P~~ls~~g~ 1471 (1509)
T KOG4645|consen 1393 GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHV-AAGHKPQIPERLSSEGR 1471 (1509)
T ss_pred HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHH-hccCCCCCchhhhHhHH
Confidence 1233557999999999998644 567999999999999999999999988654 444444 36667889999999999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
+||.+||..||+.|+++.||+ .+.|.+....+
T Consensus 1472 dFle~Cl~~dP~~Rw~~~qll------e~~f~~~~~d~ 1503 (1509)
T KOG4645|consen 1472 DFLEHCLEQDPKMRWTASQLL------EHAFGKSCTDE 1503 (1509)
T ss_pred HHHHHHHhcCchhhhHHHHHH------Hhhcccccccc
Confidence 999999999999999999994 45666554443
No 253
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.9e-36 Score=359.73 Aligned_cols=257 Identities=25% Similarity=0.346 Sum_probs=209.0
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
++|++.++||+|+||.||+|.+ .++.||||++..... .......+.+|+++++.++||||+++++++..++..|++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 5899999999999999999987 467899999875433 2345567899999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhc----------CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCC
Q 003978 582 EFLPRGSLFRLLQRN----------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGL 651 (782)
Q Consensus 582 E~~~ggsL~~~l~~~----------~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGl 651 (782)
||++|++|.+++... ...++...++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G--IIHRDLKPeNILLd~dg~vKLiDFGL 159 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG--VLHRDLKPDNILLGLFGEVVILDWGA 159 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchheEEEcCCCCEEEEecCc
Confidence 999999999998642 123456677889999999999999998 99999999999999999999999999
Q ss_pred Cccccccc------------------ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 003978 652 SRLKHETY------------------LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQV 713 (782)
Q Consensus 652 a~~~~~~~------------------~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~ 713 (782)
++...... ......+||+.|||||++.+..++.++|||||||++|+|++|..||........
T Consensus 160 Ak~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki 239 (932)
T PRK13184 160 AIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKI 239 (932)
T ss_pred ceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhh
Confidence 97541100 011124699999999999999999999999999999999999999987554433
Q ss_pred HHHhhccccccC--CCCCCCHHHHHHHHHhhhhCCCCCC-CHHHHHHHHHHHHH
Q 003978 714 IGAVGFMNQRLE--IPKDVDPRWAAIVESCWHSDPQCRP-SFQELVDKLRDLQR 764 (782)
Q Consensus 714 ~~~i~~~~~~~~--~p~~~~~~l~~LI~~cL~~dP~~RP-s~~ell~~L~~L~~ 764 (782)
.... ....... ....+++.+.+++.+||..||++|| +++++++.|..+.+
T Consensus 240 ~~~~-~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 240 SYRD-VILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred hhhh-hccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 2221 1111111 1246889999999999999999997 57777777776644
No 254
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2.3e-36 Score=319.72 Aligned_cols=248 Identities=30% Similarity=0.489 Sum_probs=203.4
Q ss_pred cceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
+.+.....||+|+||.||++.+. +..|++|.+.... ....+.+.+|+.+++.++|+||+++++++..++..+++||
T Consensus 8 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 85 (268)
T cd06624 8 DENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD--SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFME 85 (268)
T ss_pred ccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC--HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEe
Confidence 34444568999999999999864 5569999876543 3345678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcc--hHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC-CCcEEEEecCCCccccccc
Q 003978 583 FLPRGSLFRLLQRNTTKL--DWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-HWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l--~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~-~~~vkL~DFGla~~~~~~~ 659 (782)
|+++++|.+++......+ ++..+..++.||+.||+|||+.+ |+|+||||+||+++. ++.++|+|||++.......
T Consensus 86 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~ 163 (268)
T cd06624 86 QVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ--IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN 163 (268)
T ss_pred cCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcCCCCeEEEecchhheecccCC
Confidence 999999999997654445 78888899999999999999988 999999999999976 6789999999987544332
Q ss_pred ccccCCCCCCcccCcccccCCC--CCchhHHHHHHHHHHHHHcCCCCCCCCChHH-HHHHhhccccccCCCCCCCHHHHH
Q 003978 660 LTTKTGKGTPQWMAPEVLRNEP--SDEKSDVYSFGVILWELATEKIPWDNLNSMQ-VIGAVGFMNQRLEIPKDVDPRWAA 736 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~~~~--~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~-~~~~i~~~~~~~~~p~~~~~~l~~ 736 (782)
.......|++.|+|||.+.+.. ++.++||||||+++|+|++|..||....... ...........+.++..+++++.+
T Consensus 164 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (268)
T cd06624 164 PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKN 243 (268)
T ss_pred CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHH
Confidence 2233446899999999986643 6789999999999999999999997654322 222222233345677789999999
Q ss_pred HHHHhhhhCCCCCCCHHHHH
Q 003978 737 IVESCWHSDPQCRPSFQELV 756 (782)
Q Consensus 737 LI~~cL~~dP~~RPs~~ell 756 (782)
||.+||..+|.+||++.+++
T Consensus 244 li~~~l~~~p~~Rpt~~~ll 263 (268)
T cd06624 244 FILRCFEPDPDKRASAHDLL 263 (268)
T ss_pred HHHHHcCCCchhCCCHHHHH
Confidence 99999999999999999994
No 255
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=9.4e-37 Score=325.12 Aligned_cols=248 Identities=28% Similarity=0.444 Sum_probs=203.0
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeec------C
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTS------P 574 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~------~ 574 (782)
.+.|++.+.||.|+||.||++.+ .++.+|+|++.... .....+..|+.+++.+ +|+||+++++++.. .
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 91 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHD 91 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCC
Confidence 46889999999999999999997 46679999986532 2335677899999998 69999999999853 4
Q ss_pred CceeEEEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCc
Q 003978 575 QRLCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 653 (782)
Q Consensus 575 ~~~~lv~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~ 653 (782)
..+|++|||+.+++|.+++... ...+++..++.++.||+.||.|||+++ |+|+||||+||+++.++.++|+|||++.
T Consensus 92 ~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~--ivH~dl~~~nili~~~~~~~l~dfg~~~ 169 (282)
T cd06636 92 DQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK--VIHRDIKGQNVLLTENAEVKLVDFGVSA 169 (282)
T ss_pred CEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEeeCcchh
Confidence 5789999999999999999653 345788889999999999999999998 9999999999999999999999999987
Q ss_pred ccccccccccCCCCCCcccCccccc-----CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCC
Q 003978 654 LKHETYLTTKTGKGTPQWMAPEVLR-----NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPK 728 (782)
Q Consensus 654 ~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~ 728 (782)
.............|++.|+|||++. +..++.++|||||||++|+|++|..||...........+...........
T Consensus 170 ~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 249 (282)
T cd06636 170 QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSK 249 (282)
T ss_pred hhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCCCccc
Confidence 5543333334557899999999986 34577899999999999999999999977665444433322222222334
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHH
Q 003978 729 DVDPRWAAIVESCWHSDPQCRPSFQELV 756 (782)
Q Consensus 729 ~~~~~l~~LI~~cL~~dP~~RPs~~ell 756 (782)
.++.++.+||.+||..||.+||++.+++
T Consensus 250 ~~~~~~~~li~~cl~~~p~~Rp~~~ell 277 (282)
T cd06636 250 KWSKKFIDFIEGCLVKNYLSRPSTEQLL 277 (282)
T ss_pred ccCHHHHHHHHHHhCCChhhCcCHHHHh
Confidence 6889999999999999999999999994
No 256
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.6e-36 Score=322.94 Aligned_cols=256 Identities=30% Similarity=0.526 Sum_probs=216.7
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
..|+..+.||.|+||.||++.+ .+..||||++..... ......+.+|+.+++.+.||||+++++.+..+...|+|||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIME 82 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEe
Confidence 4578889999999999999987 467899999875432 3445788899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
|+++++|.+++.. .++++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..........
T Consensus 83 ~~~~~~L~~~i~~--~~l~~~~~~~~~~~l~~~l~~lh~~~--ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06640 83 YLGGGSALDLLRA--GPFDEFQIATMLKEILKGLDYLHSEK--KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR 158 (277)
T ss_pred cCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC--ccCcCCChhhEEEcCCCCEEEcccccceeccCCcccc
Confidence 9999999999875 35888899999999999999999988 9999999999999999999999999987554333223
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhh
Q 003978 663 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCW 742 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL 742 (782)
....++..|+|||++.+..++.++|+|||||++|+|++|..||...........+. ....+.++..++..+.+||.+||
T Consensus 159 ~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l 237 (277)
T cd06640 159 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIP-KNNPPTLTGEFSKPFKEFIDACL 237 (277)
T ss_pred ccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhh-cCCCCCCchhhhHHHHHHHHHHc
Confidence 34467889999999998889999999999999999999999998777655444332 22234555678899999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 743 HSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 743 ~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
..+|++||++.++ +.++||.....
T Consensus 238 ~~~p~~Rp~~~~i------l~~~~~~~~~~ 261 (277)
T cd06640 238 NKDPSFRPTAKEL------LKHKFIVKNAK 261 (277)
T ss_pred ccCcccCcCHHHH------HhChHhhhcch
Confidence 9999999999999 56777765544
No 257
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.6e-36 Score=326.01 Aligned_cols=261 Identities=24% Similarity=0.314 Sum_probs=214.7
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCC---HHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYS---DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
+|++.+.||.|+||.||+|.. .++.|+||.++..... ......+..|+++++.++|+||+++++++...+.+|+|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 488899999999999999987 4678999999765543 33455677899999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 660 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 660 (782)
|||+ +++|.+++......+++..++.++.||+.||.|||+++ |+|+||||+||+++.++.++|+|||++........
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~ 157 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNW--ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNR 157 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCChhhEEEcCCCCEEEccceeeeeccCCCc
Confidence 9999 88999999765557899999999999999999999999 99999999999999999999999999976554433
Q ss_pred cccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-----------------
Q 003978 661 TTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ----------------- 722 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~----------------- 722 (782)
......+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||........+..+.....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (298)
T cd07841 158 KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYV 237 (298)
T ss_pred cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccc
Confidence 3334457889999999865 4568899999999999999999888876665443333211000
Q ss_pred ---------ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcCC
Q 003978 723 ---------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVG 775 (782)
Q Consensus 723 ---------~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~~ 775 (782)
........+.++.+||.+||..||++|||+.++ +.++||+.......
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~------l~~~~~~~~~~~~~ 293 (298)
T cd07841 238 EFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQA------LEHPYFSNDPAPTP 293 (298)
T ss_pred cccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHH------hhCccccCCCCCCC
Confidence 000123457889999999999999999999999 67899988766654
No 258
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.7e-36 Score=319.22 Aligned_cols=253 Identities=31% Similarity=0.515 Sum_probs=211.7
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
++|++++.||.|+||.||+|.. .+..+++|++....... ....+.+|+++++.++|+||+++++.+...+..|++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 79 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMP 79 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEe
Confidence 4799999999999999999987 46679999987655433 56788999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhc--CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc
Q 003978 583 FLPRGSLFRLLQRN--TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 660 (782)
Q Consensus 583 ~~~ggsL~~~l~~~--~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 660 (782)
++++++|.+++... ...+++..+..++.|++.||.|||+++ |+|+||||+||++++++.++|+|||++........
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~--i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 80 YLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG--QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred ccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 99999999999754 246899999999999999999999998 99999999999999999999999999875543322
Q ss_pred c----ccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC-----CCC
Q 003978 661 T----TKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP-----KDV 730 (782)
Q Consensus 661 ~----~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p-----~~~ 730 (782)
. .....|++.|++||.+... .++.++|+|||||++|+|++|+.||...+............ ...++ ..+
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 236 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQND-PPSLETGADYKKY 236 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCC-CCCcCCccccccc
Confidence 1 1234689999999998776 78899999999999999999999998777655444432221 11111 357
Q ss_pred CHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 731 DPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 731 ~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
+..+.+||.+||..||++||++.++ +.|+||
T Consensus 237 ~~~~~~li~~~l~~~p~~Rp~~~~l------l~~p~~ 267 (267)
T cd06610 237 SKSFRKMISLCLQKDPSKRPTAEEL------LKHKFF 267 (267)
T ss_pred cHHHHHHHHHHcCCChhhCcCHHHH------hhCCCC
Confidence 8899999999999999999999999 456665
No 259
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2.1e-36 Score=323.26 Aligned_cols=255 Identities=29% Similarity=0.487 Sum_probs=207.1
Q ss_pred cceeEeeeeccCCcEEEEEEEE------cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC--Cc
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW------YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP--QR 576 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~------~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~ 576 (782)
+-|++++.||+|+||.||++.+ .+..||+|.++... .......+.+|+.+++.+.||||+++++++... ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 3578999999999999999974 35679999986543 344556789999999999999999999998765 56
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
.+++|||++|++|.+++......+++..++.++.||+.||+|||+++ |+|+||||+||+++.++.++|+|||++....
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~g--i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecccchheEEEcCCCCEEECCCccccccc
Confidence 89999999999999999776556899999999999999999999998 9999999999999999999999999987654
Q ss_pred cccc---cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh--------------HHHHHHhhc
Q 003978 657 ETYL---TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS--------------MQVIGAVGF 719 (782)
Q Consensus 657 ~~~~---~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~--------------~~~~~~i~~ 719 (782)
.... ......++..|+|||++.+..++.++|||||||++|+|+++..|+..... .........
T Consensus 161 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd05079 161 TDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLE 240 (284)
T ss_pred cCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHH
Confidence 3221 11234567789999999988899999999999999999998765432110 000001111
Q ss_pred cccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 720 MNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 720 ~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
.......+..++..+.+||.+||+.||++||++.++++.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 241 EGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred cCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 1223445667899999999999999999999999999998875
No 260
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.1e-36 Score=330.65 Aligned_cols=245 Identities=24% Similarity=0.367 Sum_probs=189.0
Q ss_pred eeeeccCCcEEEEEEEEc----CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec--CCceeEEEee
Q 003978 510 GEQIGQGSCGTVYHAVWY----GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS--PQRLCIVTEF 583 (782)
Q Consensus 510 ~~~IG~G~~G~Vy~~~~~----~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~~~~~lv~E~ 583 (782)
+++||+|+||.||+|... +..||+|.+...... ..+.+|+.+|+.++||||+++++++.. ...+|++|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGIS----MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY 81 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCc----HHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEec
Confidence 468999999999999863 456999998654432 346689999999999999999998854 4568999999
Q ss_pred cCCCCHHHHHhhc--------CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE----cCCCcEEEEecCC
Q 003978 584 LPRGSLFRLLQRN--------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV----DKHWTVKVGDFGL 651 (782)
Q Consensus 584 ~~ggsL~~~l~~~--------~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl----~~~~~vkL~DFGl 651 (782)
+. ++|.+++... ...+++..+..++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~--ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 82 AE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred cC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC--EEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 94 5898887532 235889999999999999999999999 9999999999999 4567899999999
Q ss_pred Cccccccc---ccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChH---------HHHHHhh
Q 003978 652 SRLKHETY---LTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSM---------QVIGAVG 718 (782)
Q Consensus 652 a~~~~~~~---~~~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~---------~~~~~i~ 718 (782)
++...... .......||+.|+|||++.+. .++.++|||||||++|+|++|.+||...... ..+..+.
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07868 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 238 (317)
T ss_pred eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHH
Confidence 97654322 122345789999999999874 5789999999999999999999999643321 1111110
Q ss_pred c-cccc-------------------------c----------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 719 F-MNQR-------------------------L----------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 719 ~-~~~~-------------------------~----------~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
. .... . ......+.++.+||.+||..||.+|||+.++ |
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~------l 312 (317)
T cd07868 239 NVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQA------M 312 (317)
T ss_pred HhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHH------h
Confidence 0 0000 0 0011235678999999999999999999999 5
Q ss_pred HHHHh
Q 003978 763 QRQYF 767 (782)
Q Consensus 763 ~~~~~ 767 (782)
+|+||
T Consensus 313 ~hp~f 317 (317)
T cd07868 313 QDPYF 317 (317)
T ss_pred cCCCC
Confidence 67776
No 261
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.4e-36 Score=320.55 Aligned_cols=254 Identities=28% Similarity=0.523 Sum_probs=213.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc-------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY-------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 576 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~-------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 576 (782)
.++|++.+.||.|+||.||++..+ ...+++|.+.... .......+.+|+++++.++|+||+++++++.....
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 82 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK-DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEP 82 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc-chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCc
Confidence 368999999999999999999863 3458999875433 23356778999999999999999999999998899
Q ss_pred eeEEEeecCCCCHHHHHhhcC--------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEe
Q 003978 577 LCIVTEFLPRGSLFRLLQRNT--------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGD 648 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~--------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~D 648 (782)
.|+||||+++++|.+++.... ..+++..+..++.||+.||+|||+++ |+|+||||+||+++.++.++|+|
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~--i~H~dlkp~Nili~~~~~~~l~~ 160 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR--FVHRDLAARNCLVSSQREVKVSL 160 (275)
T ss_pred ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC--cccCcCccceEEEeCCCcEEEcc
Confidence 999999999999999997543 15899999999999999999999998 99999999999999999999999
Q ss_pred cCCCcccccc-cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCC
Q 003978 649 FGLSRLKHET-YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEI 726 (782)
Q Consensus 649 FGla~~~~~~-~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~ 726 (782)
||++...... ........++..|++||.+.+..++.++|||||||++|+|++ |..||...........+.........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 240 (275)
T cd05046 161 LSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPV 240 (275)
T ss_pred cccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCC
Confidence 9998643221 222233456778999999988888899999999999999998 89999877766666555433333445
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003978 727 PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLR 760 (782)
Q Consensus 727 p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~ 760 (782)
+..++..+.++|.+||..+|++||++.++++.|.
T Consensus 241 ~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 241 PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 6678999999999999999999999999998775
No 262
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=3e-36 Score=322.94 Aligned_cols=255 Identities=30% Similarity=0.446 Sum_probs=208.4
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecC-----
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSP----- 574 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~----- 574 (782)
..++|++.+.||+|+||.||++.. .++.+|+|++..... ....+.+|+.+++.+ +||||+++++++...
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 96 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD---VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVG 96 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc---HHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCC
Confidence 457899999999999999999987 467899999865332 234567889999998 799999999998643
Q ss_pred CceeEEEeecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCC
Q 003978 575 QRLCIVTEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGL 651 (782)
Q Consensus 575 ~~~~lv~E~~~ggsL~~~l~~---~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGl 651 (782)
..+|+||||+++++|.+++.. ....+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||+
T Consensus 97 ~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~nili~~~~~~kl~dfg~ 174 (291)
T cd06639 97 GQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR--IIHRDVKGNNILLTTEGGVKLVDFGV 174 (291)
T ss_pred CeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEEcCCCCEEEeeccc
Confidence 358999999999999998853 3456899999999999999999999998 99999999999999999999999999
Q ss_pred CcccccccccccCCCCCCcccCcccccCCC-----CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-ccccC
Q 003978 652 SRLKHETYLTTKTGKGTPQWMAPEVLRNEP-----SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM-NQRLE 725 (782)
Q Consensus 652 a~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-----~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~-~~~~~ 725 (782)
+..............|+..|+|||++.... ++.++|||||||++|+|++|+.||...........+... .....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 254 (291)
T cd06639 175 SAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLL 254 (291)
T ss_pred chhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCC
Confidence 876544333333456899999999986433 578999999999999999999999887765554443221 11223
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003978 726 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 768 (782)
Q Consensus 726 ~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~ 768 (782)
.+..++..+.+||.+||..+|++||++.++ ++|+||+
T Consensus 255 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~i------l~~~~~~ 291 (291)
T cd06639 255 HPEKWCRSFNHFISQCLIKDFEARPSVTHL------LEHPFIK 291 (291)
T ss_pred cccccCHHHHHHHHHHhhcChhhCcCHHHH------hcCcccC
Confidence 345677899999999999999999999999 5678774
No 263
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=6.9e-37 Score=326.33 Aligned_cols=254 Identities=26% Similarity=0.346 Sum_probs=207.4
Q ss_pred cceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
++|++.++||+|+||.||+|.+. ++.||+|++............+.+|+++++.++||||+++++++..+...|+|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 47899999999999999999984 6789999986654444445678889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
|+++++|..+.... ..+++..++.++.||+.||.|||+.+ |+|+||+|+||+++.++.++|+|||++..........
T Consensus 81 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~--i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~ 157 (286)
T cd07846 81 FVDHTVLDDLEKYP-NGLDESRVRKYLFQILRGIEFCHSHN--IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY 157 (286)
T ss_pred cCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcccc
Confidence 99998888876543 35899999999999999999999998 9999999999999999999999999987654433333
Q ss_pred cCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-------------------
Q 003978 663 KTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ------------------- 722 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~------------------- 722 (782)
....++..|+|||++.+ ..++.++|||||||++|+|++|..||...........+.....
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T cd07846 158 TDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGM 237 (286)
T ss_pred CcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhcc
Confidence 34567899999999876 4467899999999999999999999976554333222211000
Q ss_pred -c---------cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 723 -R---------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 723 -~---------~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
. ....+.++..+.+||.+||..+|++||++.++ ++|+||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~i------l~~~~~ 286 (286)
T cd07846 238 RLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQL------LHHEFF 286 (286)
T ss_pred ccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHH------hcCCCC
Confidence 0 01124578899999999999999999999999 556665
No 264
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-36 Score=351.13 Aligned_cols=258 Identities=19% Similarity=0.283 Sum_probs=193.5
Q ss_pred cccceeEeeeeccCCcEEEEEEEEcCC---eEEEEE--------------E-eccCCCHHHHHHHHHHHHHHHhCCCCce
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWYGS---DVAVKV--------------F-SRQEYSDEVIHSFRQEVSLMKRLRHPNV 564 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~~~---~vAiK~--------------~-~~~~~~~~~~~~~~~Ei~il~~l~HpnI 564 (782)
..++|+++++||+|+||.||+|..+.. .+++|. + +...........+.+|+.+|+.++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 457899999999999999999875321 122221 1 1111122345668899999999999999
Q ss_pred eEEeeeeecCCceeEEEeecCCCCHHHHHhhcC----CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC
Q 003978 565 LLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNT----TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK 640 (782)
Q Consensus 565 v~l~~~~~~~~~~~lv~E~~~ggsL~~~l~~~~----~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~ 640 (782)
|++++++...+..|++|+++ +++|..++.... .......++.++.||+.||.|||+++ ||||||||+||||+.
T Consensus 226 v~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g--IiHrDLKP~NILl~~ 302 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK--LIHRDIKLENIFLNC 302 (501)
T ss_pred CcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECC
Confidence 99999999999999999999 558888775432 12345667789999999999999998 999999999999999
Q ss_pred CCcEEEEecCCCcccccccc-cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCC-CCCCCC--h-HHHHH
Q 003978 641 HWTVKVGDFGLSRLKHETYL-TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLN--S-MQVIG 715 (782)
Q Consensus 641 ~~~vkL~DFGla~~~~~~~~-~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~-Pf~~~~--~-~~~~~ 715 (782)
++.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||+||||++|.. ||.... . .+...
T Consensus 303 ~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~ 382 (501)
T PHA03210 303 DGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLK 382 (501)
T ss_pred CCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHH
Confidence 99999999999976543321 2234579999999999999999999999999999999999875 443322 1 11111
Q ss_pred Hhhccc---c---------------------ccCC-----CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 716 AVGFMN---Q---------------------RLEI-----PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 716 ~i~~~~---~---------------------~~~~-----p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
.+.... . ...+ ...++.++.++|.+||..||.+|||+.|+ |.|+|
T Consensus 383 ~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~el------L~hp~ 456 (501)
T PHA03210 383 IIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAEL------LALPL 456 (501)
T ss_pred HHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHH------hhChh
Confidence 111000 0 0000 11356678889999999999999999999 66888
Q ss_pred hhc
Q 003978 767 FQA 769 (782)
Q Consensus 767 ~~~ 769 (782)
|+.
T Consensus 457 f~~ 459 (501)
T PHA03210 457 FSA 459 (501)
T ss_pred hhc
Confidence 865
No 265
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=2.3e-36 Score=321.80 Aligned_cols=256 Identities=29% Similarity=0.484 Sum_probs=204.2
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHH-HHhCCCCceeEEeeeeecCCceeEEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSL-MKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~i-l~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
++|++.+.||+|+||.||++.+ .+..||||.++........ ..+..|+.+ ++.++||||+++++++..++..|++|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQ-KRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHH-HHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence 4789999999999999999987 4778999998765443333 334445554 66778999999999999999999999
Q ss_pred eecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHhhhcC-CCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 582 EFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHC-NPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 582 E~~~ggsL~~~l~~---~~~~l~~~~~~~i~~qll~aL~~LH~~-~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
||++ ++|.+++.. ....+++..++.++.||+.||+|||++ + ++|+||||+||+++.++.+||+|||++.....
T Consensus 80 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~--i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 80 EVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS--VIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC--eecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 9995 688887754 234689999999999999999999986 7 99999999999999999999999999876543
Q ss_pred ccccccCCCCCCcccCcccccC----CCCCchhHHHHHHHHHHHHHcCCCCCCCCC-hHHHHHHhhccccccCCC-CCCC
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRN----EPSDEKSDVYSFGVILWELATEKIPWDNLN-SMQVIGAVGFMNQRLEIP-KDVD 731 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~----~~~s~~sDIwSLG~ll~elltG~~Pf~~~~-~~~~~~~i~~~~~~~~~p-~~~~ 731 (782)
... .....|+..|+|||.+.+ ..++.++|+|||||++|+|++|..||.... ....+..+. ......++ ..++
T Consensus 157 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 234 (283)
T cd06617 157 SVA-KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVV-EEPSPQLPAEKFS 234 (283)
T ss_pred ccc-cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHH-hcCCCCCCccccC
Confidence 221 123467899999999865 446789999999999999999999997533 222222221 12222333 3578
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 732 PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 732 ~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
.++.+||.+||..+|.+||++.++ +.++||+....
T Consensus 235 ~~l~~li~~~l~~~p~~Rp~~~~i------l~~~~~~~~~~ 269 (283)
T cd06617 235 PEFQDFVNKCLKKNYKERPNYPEL------LQHPFFELHLS 269 (283)
T ss_pred HHHHHHHHHHccCChhhCcCHHHH------hcCchhhhccc
Confidence 999999999999999999999999 66899877653
No 266
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=3.5e-36 Score=316.24 Aligned_cols=255 Identities=31% Similarity=0.485 Sum_probs=217.7
Q ss_pred cceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
++|++.+.||.|++|.||++... +..|+||++...... .....+.+|+.++..++|+||+++++.+.....++++||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLE 79 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEE
Confidence 36889999999999999999884 678999998765432 456788899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhc-CCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~-~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
|+++++|.+++... ..+++..++.++.|++.||.|||+ .+ ++|+||+|+||+++.++.++|+|||++.........
T Consensus 80 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~--~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~ 156 (264)
T cd06623 80 YMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRH--IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ 156 (264)
T ss_pred ecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCC--CccCCCCHHHEEECCCCCEEEccCccceecccCCCc
Confidence 99999999999765 568999999999999999999999 88 999999999999999999999999998765544333
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC---hHHHHHHhhccccccCCCCC-CCHHHHHH
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN---SMQVIGAVGFMNQRLEIPKD-VDPRWAAI 737 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~---~~~~~~~i~~~~~~~~~p~~-~~~~l~~L 737 (782)
.....++..|+|||.+.+..++.++|+||||+++|+|++|..||.... ..+....+. ......++.. ++..+.++
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l 235 (264)
T cd06623 157 CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC-DGPPPSLPAEEFSPEFRDF 235 (264)
T ss_pred ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh-cCCCCCCCcccCCHHHHHH
Confidence 334467899999999999889999999999999999999999998774 333333332 2233445555 88999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 738 VESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 738 I~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
|.+||..+|++||++.++ +.++|++..
T Consensus 236 i~~~l~~~p~~R~~~~~l------l~~~~~~~~ 262 (264)
T cd06623 236 ISACLQKDPKKRPSAAEL------LQHPFIKKA 262 (264)
T ss_pred HHHHccCChhhCCCHHHH------HhCHHHHhc
Confidence 999999999999999999 567888754
No 267
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=4.8e-37 Score=322.79 Aligned_cols=244 Identities=24% Similarity=0.345 Sum_probs=211.1
Q ss_pred ceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCC-HHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 506 DLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
+|++.+.||.|+||.||+|... +..||+|++.+.... ....+.+.+|+++++.++||||+++++.+..+...|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4899999999999999999874 778999999865443 3556788999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
|+.+++|.+++... .++++..+..++.||+.||.|||+++ ++|+||||+||++++++.++|+|||++....... ..
T Consensus 81 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-~~ 156 (258)
T cd05578 81 LLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKG--IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-LT 156 (258)
T ss_pred CCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeEEcCCCCEEEeecccccccCCCc-cc
Confidence 99999999999765 46899999999999999999999998 9999999999999999999999999987654432 22
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh---HHHHHHhhccccccCCCCCCCHHHHHHHH
Q 003978 663 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS---MQVIGAVGFMNQRLEIPKDVDPRWAAIVE 739 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~---~~~~~~i~~~~~~~~~p~~~~~~l~~LI~ 739 (782)
....|+..|+|||.+.+..++.++|+|||||++|+|++|..||..... ....... .......+..++..+.++|.
T Consensus 157 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~ 234 (258)
T cd05578 157 TSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQ--ETADVLYPATWSTEAIDAIN 234 (258)
T ss_pred cccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHh--ccccccCcccCcHHHHHHHH
Confidence 345688999999999988899999999999999999999999987764 2222222 11455677789999999999
Q ss_pred HhhhhCCCCCCCH--HHH
Q 003978 740 SCWHSDPQCRPSF--QEL 755 (782)
Q Consensus 740 ~cL~~dP~~RPs~--~el 755 (782)
+||..||.+||++ +++
T Consensus 235 ~~l~~~p~~R~~~~~~~l 252 (258)
T cd05578 235 KLLERDPQKRLGDNLKDL 252 (258)
T ss_pred HHccCChhHcCCccHHHH
Confidence 9999999999999 776
No 268
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=3e-36 Score=315.35 Aligned_cols=249 Identities=39% Similarity=0.687 Sum_probs=212.2
Q ss_pred eeEeeeeccCCcEEEEEEEEcC------CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 507 LTIGEQIGQGSCGTVYHAVWYG------SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 507 y~i~~~IG~G~~G~Vy~~~~~~------~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
+++.+.||.|+||.||++.... ..||+|++..... ......+..|+.+++.++|+||+++++++...+..|++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i 79 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD-EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIV 79 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC-hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEE
Confidence 4577899999999999998854 6799999865432 33567888999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCc-chHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 581 TEFLPRGSLFRLLQRNTTK-LDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~-l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
|||+++++|.+++...... +++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 80 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~--~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 80 MEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN--FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred EeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC--eeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 9999999999999765444 899999999999999999999998 9999999999999999999999999987654431
Q ss_pred cc-ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHH
Q 003978 660 LT-TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 737 (782)
Q Consensus 660 ~~-~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~L 737 (782)
.. .....+++.|++||.+.+..++.++|||||||++|+|++ |..||...+.......+.. ......+..++.++.++
T Consensus 158 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 236 (258)
T smart00219 158 YYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKK-GYRLPKPENCPPEIYKL 236 (258)
T ss_pred ccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc-CCCCCCCCcCCHHHHHH
Confidence 11 112346789999999988889999999999999999998 8999988777666655543 23445666789999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHH
Q 003978 738 VESCWHSDPQCRPSFQELVDKL 759 (782)
Q Consensus 738 I~~cL~~dP~~RPs~~ell~~L 759 (782)
+.+||..||++|||+.++++.|
T Consensus 237 i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 237 MLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHCcCChhhCcCHHHHHhhC
Confidence 9999999999999999998754
No 269
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.5e-36 Score=320.35 Aligned_cols=254 Identities=31% Similarity=0.514 Sum_probs=211.6
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC----CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY----SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~----~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
+|+..+.||+|+||.||++.. .+..||+|+++.... .......+.+|+++++.++|+||+++++++...+.+++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 478889999999999999986 577899999875432 12356788999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC-cEEEEecCCCcccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW-TVKVGDFGLSRLKHET 658 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~-~vkL~DFGla~~~~~~ 658 (782)
||||+.+++|.+++... .++++..++.++.||+.||.|||+++ ++|+||||+||+++.++ .+||+|||++......
T Consensus 81 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~al~~LH~~~--i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY-GAFKEAVIINYTEQLLRGLSYLHENQ--IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK 157 (268)
T ss_pred EEeccCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEEcccccccccccc
Confidence 99999999999999764 46889999999999999999999998 99999999999998775 5999999998755432
Q ss_pred cc----cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH---HHHHHhhccccccCCCCCCC
Q 003978 659 YL----TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM---QVIGAVGFMNQRLEIPKDVD 731 (782)
Q Consensus 659 ~~----~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~---~~~~~i~~~~~~~~~p~~~~ 731 (782)
.. ......|+..|+|||.+.+..++.++|||||||++|+|++|..||...... .....+........++..++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (268)
T cd06630 158 GTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLS 237 (268)
T ss_pred cccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhC
Confidence 11 112346789999999999888999999999999999999999999754432 22222222334556777889
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003978 732 PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 768 (782)
Q Consensus 732 ~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~ 768 (782)
+++.++|.+||..+|.+||++.++ +.|+||+
T Consensus 238 ~~~~~~i~~~l~~~p~~R~~~~~l------l~~~~~~ 268 (268)
T cd06630 238 PGLRDVTLRCLELQPEDRPPSREL------LKHPVFR 268 (268)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHH------hcCcccC
Confidence 999999999999999999999999 5677764
No 270
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.8e-36 Score=317.47 Aligned_cols=249 Identities=27% Similarity=0.483 Sum_probs=210.8
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
+|++.+.||+|+||.||++.. .+..+|+|.+............+.+|+.+++.++|+||+++++.+.....+|+|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 588999999999999999987 467799999876544444456778899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc-EEEEecCCCccccccccc
Q 003978 584 LPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT-VKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 584 ~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~-vkL~DFGla~~~~~~~~~ 661 (782)
+.+++|.+++.... ..+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++. +||+|||.+.........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~ 158 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK--ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMEL 158 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEEcCCCCeEEecccccchhccCCccc
Confidence 99999999996543 35789999999999999999999998 999999999999998764 699999998765543333
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHh
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 741 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~c 741 (782)
.....|++.|+|||++.+..++.++|+|||||++|+|++|..||...+.......+. .......++.++.++.++|.+|
T Consensus 159 ~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~ 237 (257)
T cd08225 159 AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKIC-QGYFAPISPNFSRDLRSLISQL 237 (257)
T ss_pred ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh-cccCCCCCCCCCHHHHHHHHHH
Confidence 334468999999999988889999999999999999999999998776655544432 2223345567889999999999
Q ss_pred hhhCCCCCCCHHHHHH
Q 003978 742 WHSDPQCRPSFQELVD 757 (782)
Q Consensus 742 L~~dP~~RPs~~ell~ 757 (782)
|..+|++|||+.++++
T Consensus 238 l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 238 FKVSPRDRPSITSILK 253 (257)
T ss_pred hccChhhCcCHHHHhh
Confidence 9999999999999943
No 271
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=4.1e-36 Score=324.45 Aligned_cols=259 Identities=29% Similarity=0.550 Sum_probs=214.9
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCC----eEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGS----DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~----~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
.++|+..+.||+|+||.||++.+ .+. .+|+|++.... .......+.+|+.+++.+.||||+++++++... ..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~ 83 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TI 83 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cc
Confidence 45789999999999999999986 333 46888876433 233345688899999999999999999998754 46
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
++++||+++|+|.+++......+++..++.++.|++.||.|||+++ |+|+||||+||+++.++.+||+|||+++....
T Consensus 84 ~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~--ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 84 QLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR--LVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred eeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcC--eeccccccceeeecCCCceEEccccccccccC
Confidence 7999999999999999876667899999999999999999999998 99999999999999999999999999976443
Q ss_pred ccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHH
Q 003978 658 TYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 734 (782)
Q Consensus 658 ~~~--~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l 734 (782)
... ......++..|++||.+.+..++.++|||||||++|+|++ |..||...........+. .......+..++..+
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 240 (303)
T cd05110 162 DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE-KGERLPQPPICTIDV 240 (303)
T ss_pred cccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-CCCCCCCCCCCCHHH
Confidence 221 1223345778999999999999999999999999999997 999998776555443332 333445566788999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 735 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 735 ~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
.++|.+||..+|++||++.++++.|.++.+...
T Consensus 241 ~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (303)
T cd05110 241 YMVMVKCWMIDADSRPKFKELAAEFSRMARDPQ 273 (303)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHhchh
Confidence 999999999999999999999999999876654
No 272
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=4.2e-36 Score=313.23 Aligned_cols=253 Identities=34% Similarity=0.579 Sum_probs=218.6
Q ss_pred ceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC--CceeEEE
Q 003978 506 DLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP--QRLCIVT 581 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~~lv~ 581 (782)
+|.+.+.||+|++|.||+|... +..|++|++............+.+|+.+++.++||||+++++.+... ..++++|
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4788899999999999999985 77899999877665556678899999999999999999999999888 8899999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc-
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL- 660 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~- 660 (782)
||+++++|.+++.... .+++..++.++.|++.+|.|||+.+ ++|+||+|+||+++.++.++|+|||.+........
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~--~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 81 EYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNG--IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred EecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence 9999999999997655 7899999999999999999999988 99999999999999999999999999876655432
Q ss_pred -cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC-hHHHHHHhhccccccCCCCCCCHHHHHHH
Q 003978 661 -TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN-SMQVIGAVGFMNQRLEIPKDVDPRWAAIV 738 (782)
Q Consensus 661 -~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~-~~~~~~~i~~~~~~~~~p~~~~~~l~~LI 738 (782)
......++..|++||.+.+...+.++||||||+++|+|++|..||.... .......+........++..++..+.+||
T Consensus 158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 237 (260)
T cd06606 158 EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFL 237 (260)
T ss_pred ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHH
Confidence 1334578999999999998889999999999999999999999998776 23333333323445667788899999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 739 ESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 739 ~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
.+||..||.+||++.++ +.|+||
T Consensus 238 ~~~l~~~p~~Rp~~~~l------l~~~~~ 260 (260)
T cd06606 238 RKCLRRDPKKRPTADEL------LQHPFL 260 (260)
T ss_pred HHhCcCChhhCCCHHHH------hhCCCC
Confidence 99999999999999999 556664
No 273
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=5.8e-36 Score=318.57 Aligned_cols=256 Identities=31% Similarity=0.528 Sum_probs=216.0
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
+-|++.+.||.|+||.||++.. .+..||||++..... ......+.+|+.+++.++||||+++++.+..+...|+|||
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 82 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 82 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEE
Confidence 3477889999999999999986 467899999865432 3445678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
|+++++|.+++.. ..+++..+..++.|++.+|.|||+.+ ++|+||||+||+++.++.++|+|||++..........
T Consensus 83 ~~~~~~l~~~i~~--~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06641 83 YLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEK--KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 158 (277)
T ss_pred eCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHccCC--eecCCCCHHhEEECCCCCEEEeecccceecccchhhh
Confidence 9999999999864 35889999999999999999999988 9999999999999999999999999987554432223
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhh
Q 003978 663 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCW 742 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL 742 (782)
....++..|++||.+.+...+.++|+|||||++|+|++|..||...........+. ......++..++.++.++|.+||
T Consensus 159 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l 237 (277)
T cd06641 159 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIP-KNNPPTLEGNYSKPLKEFVEACL 237 (277)
T ss_pred ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHh-cCCCCCCCcccCHHHHHHHHHHc
Confidence 34568899999999988888999999999999999999999998776655444442 22344566678999999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 743 HSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 743 ~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
..+|.+||++.++ +.|+||+....
T Consensus 238 ~~~p~~Rp~~~~~------l~~~~~~~~~~ 261 (277)
T cd06641 238 NKEPSFRPTAKEL------LKHKFIVRFAK 261 (277)
T ss_pred cCChhhCcCHHHH------HhCHHHhhhhh
Confidence 9999999999999 45678765543
No 274
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.6e-36 Score=323.53 Aligned_cols=253 Identities=25% Similarity=0.371 Sum_probs=206.0
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
+|++++.||.|++|.||++.. .+..||||.++...........+.+|+++++.++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 488999999999999999987 467899999875544344446788899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 584 LPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 584 ~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
+. ++|..++... ...+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||++..........
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~--i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~ 157 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 157 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEEeeccchhhcccCcccc
Confidence 95 5898888653 346889999999999999999999998 9999999999999999999999999987554333233
Q ss_pred cCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-------------------
Q 003978 663 KTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ------------------- 722 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~~~-~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~------------------- 722 (782)
....+++.|+|||++.+.. ++.++|||||||++|+|+||+.||...+.......+.....
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07860 158 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPS 237 (284)
T ss_pred ccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhh
Confidence 3445788999999987644 58899999999999999999999987665433322211000
Q ss_pred --------ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 723 --------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 723 --------~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
...+.+.+++++++||.+||..||.+||++.++ +.|+||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~------l~~~~f 284 (284)
T cd07860 238 FPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAA------LAHPFF 284 (284)
T ss_pred cccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHH------hcCCCC
Confidence 001123578899999999999999999999999 456665
No 275
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=3.3e-36 Score=316.79 Aligned_cols=247 Identities=32% Similarity=0.586 Sum_probs=209.2
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
+|++.+.||+|+||.||++.. .++.|++|+++...........+.+|+.+++.++|+||+++++.+...+.+++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 588999999999999999986 567899999987665556778899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc-
Q 003978 584 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT- 662 (782)
Q Consensus 584 ~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~- 662 (782)
+++++|.+++... ..+++..+..++.+++.||.|||+.+ |+|+||||+||+++.++.+||+|||++..........
T Consensus 81 ~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~--i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~ 157 (264)
T cd06626 81 CSGGTLEELLEHG-RILDEHVIRVYTLQLLEGLAYLHSHG--IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG 157 (264)
T ss_pred CCCCcHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEcccccccccCCCCCccc
Confidence 9999999999764 35788999999999999999999998 9999999999999999999999999987654332211
Q ss_pred ---cCCCCCCcccCcccccCCC---CCchhHHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHhhccccccCCCCC--CCHH
Q 003978 663 ---KTGKGTPQWMAPEVLRNEP---SDEKSDVYSFGVILWELATEKIPWDNLNS-MQVIGAVGFMNQRLEIPKD--VDPR 733 (782)
Q Consensus 663 ---~~~~Gt~~y~aPE~l~~~~---~s~~sDIwSLG~ll~elltG~~Pf~~~~~-~~~~~~i~~~~~~~~~p~~--~~~~ 733 (782)
....+++.|++||++.+.. ++.++|||||||++|+|++|..||..... ......+.. .....+|.. ++..
T Consensus 158 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 236 (264)
T cd06626 158 EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-GHKPPIPDSLQLSPE 236 (264)
T ss_pred ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-CCCCCCCcccccCHH
Confidence 1246789999999998766 78899999999999999999999976643 222222322 334444544 4899
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHH
Q 003978 734 WAAIVESCWHSDPQCRPSFQELV 756 (782)
Q Consensus 734 l~~LI~~cL~~dP~~RPs~~ell 756 (782)
+.+||.+||..+|.+||++.+++
T Consensus 237 ~~~li~~~l~~~p~~R~~~~~i~ 259 (264)
T cd06626 237 GKDFLDRCLESDPKKRPTASELL 259 (264)
T ss_pred HHHHHHHHccCCcccCCCHHHHh
Confidence 99999999999999999999994
No 276
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-36 Score=327.92 Aligned_cols=260 Identities=30% Similarity=0.519 Sum_probs=222.6
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEcC-CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYG-SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~-~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
.+.......++++||+|-||.|.+|...+ ..||+|.++.... ......|.+|+++|.+|+|||||+++++|..++.++
T Consensus 533 ~EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~-~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePic 611 (807)
T KOG1094|consen 533 VEFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDAT-KNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLC 611 (807)
T ss_pred hhcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccc-hhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchH
Confidence 35566788999999999999999999876 8899999976653 344688999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcc-hHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKL-DWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l-~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
+|+|||+.|+|.+++..+..+. .-.....|+.||+.||+||.+.+ +|||||.+.|+|++.++++||+|||+++....
T Consensus 612 mI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n--fVHrd~a~rNcLv~~e~~iKiadfgmsR~lys 689 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN--FVHRDLATRNCLVDGEFTIKIADFGMSRNLYS 689 (807)
T ss_pred HHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc--hhhccccccceeecCcccEEecCccccccccc
Confidence 9999999999999998874443 55566779999999999999999 99999999999999999999999999984332
Q ss_pred -cc-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc--CCCCCCCCChHHHHHHhhcccc------ccCCC
Q 003978 658 -TY-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT--EKIPWDNLNSMQVIGAVGFMNQ------RLEIP 727 (782)
Q Consensus 658 -~~-~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt--G~~Pf~~~~~~~~~~~i~~~~~------~~~~p 727 (782)
.+ ......+-..+|||||.+...+++.++|+|++|+++||+++ ...||..+...++.+....+.. -+..|
T Consensus 690 g~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P 769 (807)
T KOG1094|consen 690 GDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRP 769 (807)
T ss_pred CCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCC
Confidence 22 22223345789999999999999999999999999999765 7899999999888877654332 24577
Q ss_pred CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 728 KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 728 ~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
..++..+.++|.+||..+.++||+++++...|.+.
T Consensus 770 ~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 770 PACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred CcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 88999999999999999999999999997776654
No 277
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2.7e-36 Score=320.85 Aligned_cols=255 Identities=31% Similarity=0.524 Sum_probs=210.5
Q ss_pred cceeEeeeeccCCcEEEEEEEEc------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec--CCc
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS--PQR 576 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~~~ 576 (782)
++|++.+.||+|+||.||++.+. +..+|||+++..... .....+.+|+++++.+.||||+++++++.. ...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~ 82 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRS 82 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCc
Confidence 57888999999999999999864 457999998765443 456788999999999999999999999877 557
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
.+++|||+++++|.+++......+++..++.++.||+.||+|||+++ |+|+||||+||+++.++.++|+|||++....
T Consensus 83 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 83 LRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQR--YIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred eEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 89999999999999999876667999999999999999999999998 9999999999999999999999999998655
Q ss_pred cccc---cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH--------------HHHHhhc
Q 003978 657 ETYL---TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ--------------VIGAVGF 719 (782)
Q Consensus 657 ~~~~---~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~--------------~~~~i~~ 719 (782)
.... ......++..|++||.+.+..++.++|||||||++|+|++|..||....... .......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd05038 161 EDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLK 240 (284)
T ss_pred cCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHH
Confidence 3211 1112345667999999998889999999999999999999999986532211 0111111
Q ss_pred cccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 720 MNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 720 ~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
.......+..++.++.+|+.+||..+|.+||++.++++.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 241 EGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred cCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 1223344566789999999999999999999999999998875
No 278
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=5.4e-36 Score=323.71 Aligned_cols=259 Identities=24% Similarity=0.361 Sum_probs=211.9
Q ss_pred cceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCC-HHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
++|++.+.||+|+||.||++.+. ++.|+||.+...... ......+.+|+++++.++||||+++++.+..++.+|+||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36899999999999999999874 567999998765432 234567888999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc--
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY-- 659 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~-- 659 (782)
||++|++|.+++... ..+++..+..++.|++.||.|||+++ |+|+||||+||+++.++.+||+|||+++......
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~ 157 (305)
T cd05609 81 EYVEGGDCATLLKNI-GALPVDMARMYFAETVLALEYLHNYG--IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTT 157 (305)
T ss_pred ecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchHHEEECCCCCEEEeeCCCccccCcCccc
Confidence 999999999999765 46889999999999999999999998 9999999999999999999999999886321110
Q ss_pred -------------ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-ccC
Q 003978 660 -------------LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-RLE 725 (782)
Q Consensus 660 -------------~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~-~~~ 725 (782)
.......|+..|+|||.+.+..++.++|||||||++|+|++|..||.+....+....+..... .+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (305)
T cd05609 158 NLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE 237 (305)
T ss_pred cccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCC
Confidence 011123578899999999988899999999999999999999999987776665555432221 222
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 726 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 726 ~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
....++.++.+||.+||..||++||+..++++. +.++||..
T Consensus 238 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~l---l~~~~~~~ 278 (305)
T cd05609 238 GDEALPADAQDLISRLLRQNPLERLGTGGAFEV---KQHRFFLG 278 (305)
T ss_pred ccccCCHHHHHHHHHHhccChhhccCccCHHHH---HhCccccC
Confidence 233688999999999999999999985444332 56788744
No 279
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.9e-36 Score=324.78 Aligned_cols=254 Identities=25% Similarity=0.340 Sum_probs=209.0
Q ss_pred cceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC--CceeEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP--QRLCIV 580 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~~lv 580 (782)
++|++.+.||.|+||.||+|.+. ++.+++|.++...........+.+|+.++..++||||+++++++... ..+|+|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 57899999999999999999984 67799999976554444445667899999999999999999998877 889999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 660 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 660 (782)
|||+. ++|.+++......+++..++.++.||+.||.|||+++ |+|+||||+||+++.++.+||+|||++........
T Consensus 85 ~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 161 (293)
T cd07843 85 MEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNW--ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK 161 (293)
T ss_pred ehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCHHHEEECCCCcEEEeecCceeeccCCcc
Confidence 99996 5999999776667899999999999999999999998 99999999999999999999999999876554433
Q ss_pred cccCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-----------------
Q 003978 661 TTKTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ----------------- 722 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~~~~-~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~----------------- 722 (782)
......+++.|+|||.+.+.. ++.++|||||||++|+|++|..||...........+.....
T Consensus 162 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (293)
T cd07843 162 PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAK 241 (293)
T ss_pred ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhc
Confidence 333456789999999987654 58899999999999999999999987766554433211000
Q ss_pred ------------ccCCCCC-CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 723 ------------RLEIPKD-VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 723 ------------~~~~p~~-~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
...++.. +++.+.+||.+||..+|++|||+.++ +.++||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~el------l~~~~f 293 (293)
T cd07843 242 KKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDA------LKHPYF 293 (293)
T ss_pred ccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHH------hcCCCC
Confidence 0112222 58889999999999999999999999 455665
No 280
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=4.4e-36 Score=313.44 Aligned_cols=249 Identities=30% Similarity=0.503 Sum_probs=218.2
Q ss_pred ceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
+|.+.+.||.|+||.||++.+. +..|++|++............+.+|+++++.++|||++++++.+......+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 5889999999999999999985 77899999987666556677888999999999999999999999998999999999
Q ss_pred cCCCCHHHHHhhc---CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc
Q 003978 584 LPRGSLFRLLQRN---TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 660 (782)
Q Consensus 584 ~~ggsL~~~l~~~---~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 660 (782)
+++++|.+++... ...+++..++.++.+++.||.|||+++ ++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 158 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK--ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVD 158 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC--EecccCChHHeEEcCCCcEEECCccceeecccCcc
Confidence 9999999999764 367899999999999999999999998 99999999999999999999999999876555432
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHH
Q 003978 661 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVES 740 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~ 740 (782)
......|++.|+|||.+.+..++.++|+||||+++|+|++|..||...+......... ......++..++..+.++|.+
T Consensus 159 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~ 237 (258)
T cd08215 159 LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKIL-KGQYPPIPSQYSSELRNLVSS 237 (258)
T ss_pred eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHH
Confidence 3334578999999999999889999999999999999999999998877665555443 223455667889999999999
Q ss_pred hhhhCCCCCCCHHHHHH
Q 003978 741 CWHSDPQCRPSFQELVD 757 (782)
Q Consensus 741 cL~~dP~~RPs~~ell~ 757 (782)
||..+|++||++.++++
T Consensus 238 ~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 238 LLQKDPEERPSIAQILQ 254 (258)
T ss_pred HcCCChhhCcCHHHHhc
Confidence 99999999999999943
No 281
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2.6e-36 Score=322.01 Aligned_cols=249 Identities=25% Similarity=0.347 Sum_probs=205.5
Q ss_pred cceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
++|++.++||+|+||.||+|.+. ++.|+||+++...........+.+|+++++.+.|+||+++++.+..++..+++||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36999999999999999999874 6779999987655445556788899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc-c
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL-T 661 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~-~ 661 (782)
|++++.+..++. ....+++..++.++.||+.||.|||+.+ |+|+||||+||+++.++.+||+|||++........ .
T Consensus 81 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~ 157 (288)
T cd07833 81 YVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAIAYCHSHN--IIHRDIKPENILVSESGVLKLCDFGFARALRARPASP 157 (288)
T ss_pred cCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCCCCEEEEeeecccccCCCcccc
Confidence 998766655554 3456899999999999999999999998 99999999999999999999999999876554332 2
Q ss_pred ccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc------------------
Q 003978 662 TKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ------------------ 722 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~------------------ 722 (782)
.....+++.|+|||++.+. .++.++|||||||++|+|++|..||...........+.....
T Consensus 158 ~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07833 158 LTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAG 237 (288)
T ss_pred ccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccc
Confidence 2345678999999999888 788999999999999999999999987655443322211000
Q ss_pred ------------ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHH
Q 003978 723 ------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELV 756 (782)
Q Consensus 723 ------------~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell 756 (782)
....+..++.++.+||.+||..+|++||++.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il 283 (288)
T cd07833 238 VAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELL 283 (288)
T ss_pred cccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHh
Confidence 0012334588999999999999999999999994
No 282
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=4.2e-36 Score=318.17 Aligned_cols=249 Identities=29% Similarity=0.548 Sum_probs=205.6
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC--------CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY--------SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~--------~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
+|.+.+.||.|+||.||+|.. .++.+|+|.++.... .....+.+..|+.+++.++||||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 588899999999999999976 577899998864321 1123467888999999999999999999999999
Q ss_pred ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
.+++||||+++++|.+++... ..+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++...
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~~~nil~~~~~~~~l~d~~~~~~~ 158 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHSKG--ILHRDLKADNLLVDADGICKISDFGISKKS 158 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCC--eeecCCChhhEEEcCCCeEEEeeccccccc
Confidence 999999999999999999765 46889999999999999999999998 999999999999999999999999998754
Q ss_pred ccccc--cccCCCCCCcccCcccccCCC--CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC----
Q 003978 656 HETYL--TTKTGKGTPQWMAPEVLRNEP--SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP---- 727 (782)
Q Consensus 656 ~~~~~--~~~~~~Gt~~y~aPE~l~~~~--~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p---- 727 (782)
..... ......|+..|+|||++.... ++.++|+||||+++|+|++|..||...........+........++
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (272)
T cd06629 159 DDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVS 238 (272)
T ss_pred cccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCcccc
Confidence 33211 122346889999999987654 7889999999999999999999997666554443332222222222
Q ss_pred CCCCHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003978 728 KDVDPRWAAIVESCWHSDPQCRPSFQELVD 757 (782)
Q Consensus 728 ~~~~~~l~~LI~~cL~~dP~~RPs~~ell~ 757 (782)
..++.++.+||.+||..+|++||++.++++
T Consensus 239 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 239 MNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred ccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 356899999999999999999999999943
No 283
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=4.2e-36 Score=322.93 Aligned_cols=258 Identities=28% Similarity=0.461 Sum_probs=214.9
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
...+|++.+.||+|+||.||++.. .+..|++|.+..... .....+.+|+.+++.++||||+++++.+...+..|+|
T Consensus 17 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 17 PKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred chhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc--hHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence 347899999999999999999986 567799999864332 2346678899999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 660 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 660 (782)
+||+++++|.+++... .+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++........
T Consensus 95 ~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~g--i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~ 170 (293)
T cd06647 95 MEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (293)
T ss_pred EecCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCC--EeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence 9999999999999753 4788899999999999999999998 99999999999999999999999998865443333
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-ccccCCCCCCCHHHHHHHH
Q 003978 661 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM-NQRLEIPKDVDPRWAAIVE 739 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~-~~~~~~p~~~~~~l~~LI~ 739 (782)
......|++.|++||.+.+..++.++|+|||||++|+|++|..||...+.......+... ......+..++..+++||.
T Consensus 171 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 250 (293)
T cd06647 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN 250 (293)
T ss_pred ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHH
Confidence 333446889999999998888899999999999999999999999876554332222111 1112233457889999999
Q ss_pred HhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 740 SCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 740 ~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
+||..+|++||++.++ +.|+||+..+.
T Consensus 251 ~~l~~~p~~Rp~~~~i------l~h~~~~~~~~ 277 (293)
T cd06647 251 RCLEMDVEKRGSAKEL------LQHPFLKIAKP 277 (293)
T ss_pred HHccCChhhCcCHHHH------hcCHHHhcCcc
Confidence 9999999999999999 68899987774
No 284
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=7.5e-36 Score=311.60 Aligned_cols=247 Identities=30% Similarity=0.587 Sum_probs=216.6
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
+|++.+.||+|++|.||++.. .++.|++|.+............+.+|++++..++||||+++++++...+.++++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 588999999999999999987 466899999987766556678899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccccc
Q 003978 584 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTK 663 (782)
Q Consensus 584 ~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 663 (782)
+++++|.+++... ..+++..++.++.|++.+|.|||+.+ |+|+||||+||+++.++.++|+|||++...........
T Consensus 81 ~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 157 (254)
T cd06627 81 AENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQG--VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDA 157 (254)
T ss_pred CCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCHHHEEECCCCCEEEeccccceecCCCccccc
Confidence 9999999999765 56899999999999999999999998 99999999999999999999999999986655443334
Q ss_pred CCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhh
Q 003978 664 TGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWH 743 (782)
Q Consensus 664 ~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~ 743 (782)
...++..|++||.+.+..++.++|||+||+++|+|++|..||...........+. ......++..++..+.++|.+||.
T Consensus 158 ~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~ 236 (254)
T cd06627 158 SVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIV-QDDHPPLPEGISPELKDFLMQCFQ 236 (254)
T ss_pred ccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh-ccCCCCCCCCCCHHHHHHHHHHHh
Confidence 4568999999999988888999999999999999999999998777655444443 234456677889999999999999
Q ss_pred hCCCCCCCHHHHH
Q 003978 744 SDPQCRPSFQELV 756 (782)
Q Consensus 744 ~dP~~RPs~~ell 756 (782)
.+|++||++.+++
T Consensus 237 ~~p~~R~~~~~~l 249 (254)
T cd06627 237 KDPNLRPTAKQLL 249 (254)
T ss_pred CChhhCcCHHHHh
Confidence 9999999999994
No 285
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=3.2e-36 Score=322.50 Aligned_cols=254 Identities=25% Similarity=0.376 Sum_probs=202.3
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
.++|++.+.||+|+||.||++.. .++.||||.+....... ....+.+|+.+++.++||||+++++++..+...|+||
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG-APFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVF 82 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC-CchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEE
Confidence 36899999999999999999987 46789999987543221 1234567999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
||+.+ +|.+++......+++..++.++.||+.||.|||+.+ |+|+||||+||+++.++.+||+|||+++........
T Consensus 83 e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~--i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 159 (291)
T cd07844 83 EYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRR--VLHRDLKPQNLLISERGELKLADFGLARAKSVPSKT 159 (291)
T ss_pred ecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecccCCHHHEEEcCCCCEEECccccccccCCCCcc
Confidence 99964 999999876667899999999999999999999998 999999999999999999999999998754433222
Q ss_pred ccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHhhcc-cc----------------
Q 003978 662 TKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNS-MQVIGAVGFM-NQ---------------- 722 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~-~~~~~~i~~~-~~---------------- 722 (782)
.....+++.|+|||++.+ ..++.++|||||||++|+|++|..||..... .+....+... ..
T Consensus 160 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (291)
T cd07844 160 YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFK 239 (291)
T ss_pred ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccc
Confidence 233457889999999876 4578899999999999999999999976552 1111111000 00
Q ss_pred --cc---------CCCCCCC--HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 723 --RL---------EIPKDVD--PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 723 --~~---------~~p~~~~--~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
.. .....++ .++.++|.+||..+|++||++.++ +.++||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~------l~~~~f 291 (291)
T cd07844 240 PYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEA------MKHPYF 291 (291)
T ss_pred cccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHH------hcCCCC
Confidence 00 0001234 788999999999999999999999 455665
No 286
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=8.1e-36 Score=322.64 Aligned_cols=256 Identities=32% Similarity=0.456 Sum_probs=213.0
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
..+.|.+.+.||+|+||.||++.. .++.||+|++..... ..+....+.+|+.+++.++||||+++++++...+..|+
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~l 92 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWL 92 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEE
Confidence 345799999999999999999987 477899999865433 34555678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
||||+. ++|.+++......+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++......
T Consensus 93 v~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~--i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~- 168 (307)
T cd06607 93 VMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHE--RIHRDIKAGNILLTEPGTVKLADFGSASLVSPA- 168 (307)
T ss_pred EHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcccEEECCCCCEEEeecCcceecCCC-
Confidence 999996 5888887665567899999999999999999999998 999999999999999999999999998654322
Q ss_pred ccccCCCCCCcccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHH
Q 003978 660 LTTKTGKGTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 736 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~---~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~ 736 (782)
....+++.|+|||++. ...++.++||||||+++|+|++|..||...+.......+.........+..++..+.+
T Consensus 169 ---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (307)
T cd06607 169 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRN 245 (307)
T ss_pred ---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHHH
Confidence 2346788999999974 3557889999999999999999999998877666554443222222223457889999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 737 IVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 737 LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
+|.+||..||++||++.++ +.++||+...
T Consensus 246 li~~~l~~~p~~Rp~~~~i------l~~~~~~~~~ 274 (307)
T cd06607 246 FVDSCLQKIPQDRPSSEEL------LKHRFVLRER 274 (307)
T ss_pred HHHHHhcCChhhCcCHHHH------hcChhhcccC
Confidence 9999999999999999999 4567876544
No 287
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-38 Score=361.80 Aligned_cols=257 Identities=24% Similarity=0.398 Sum_probs=225.5
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
...++|.++++||+|+||.|.+++++ ++-||||++.+... ......-|+.|-.+|...+.+=||+++.+|.++.++|
T Consensus 72 l~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LY 151 (1317)
T KOG0612|consen 72 LKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLY 151 (1317)
T ss_pred CCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceE
Confidence 34579999999999999999999985 55699999977432 2233456888999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc-c
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH-E 657 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~-~ 657 (782)
+|||||+||+|-.++.+.. ++++..+++++..|+.||..||+.| +|||||||+||||+..|+|||+|||.+-... +
T Consensus 152 lVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mg--yVHRDiKPDNvLld~~GHikLADFGsClkm~~d 228 (1317)
T KOG0612|consen 152 LVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMG--YVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD 228 (1317)
T ss_pred EEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhcc--ceeccCCcceeEecccCcEeeccchhHHhcCCC
Confidence 9999999999999998877 8999999999999999999999999 9999999999999999999999999776555 5
Q ss_pred ccccccCCCCCCcccCccccc----C-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC--CCC
Q 003978 658 TYLTTKTGKGTPQWMAPEVLR----N-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP--KDV 730 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~----~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p--~~~ 730 (782)
....+...+|||.|.+||++. + ..|+.-.|+|||||++|||++|..||....-...+.+|......+.+| ..+
T Consensus 229 G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~V 308 (1317)
T KOG0612|consen 229 GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDV 308 (1317)
T ss_pred CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCccccc
Confidence 556677789999999999985 3 457889999999999999999999999988889999987777777888 568
Q ss_pred CHHHHHHHHHhhhhCCCCCCC---HHHHHHHHHHHHHHHhh
Q 003978 731 DPRWAAIVESCWHSDPQCRPS---FQELVDKLRDLQRQYFQ 768 (782)
Q Consensus 731 ~~~l~~LI~~cL~~dP~~RPs---~~ell~~L~~L~~~~~~ 768 (782)
|.++++||.+.+. +|+.|.. +.++ -.|+||.
T Consensus 309 SeeakdLI~~ll~-~~e~RLgrngiedi------k~HpFF~ 342 (1317)
T KOG0612|consen 309 SEEAKDLIEALLC-DREVRLGRNGIEDI------KNHPFFE 342 (1317)
T ss_pred CHHHHHHHHHHhc-ChhhhcccccHHHH------HhCcccc
Confidence 9999999999776 6888877 8888 4678883
No 288
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.2e-36 Score=318.17 Aligned_cols=249 Identities=31% Similarity=0.486 Sum_probs=204.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCC-----
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQ----- 575 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~----- 575 (782)
.++|++.+.||.|+||.||+|.. .++.+++|++..... ....+.+|+.+++.+ .|+||+++++++....
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED---EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 47899999999999999999998 456799999875442 235788999999999 6999999999986544
Q ss_pred -ceeEEEeecCCCCHHHHHhhc---CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCC
Q 003978 576 -RLCIVTEFLPRGSLFRLLQRN---TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGL 651 (782)
Q Consensus 576 -~~~lv~E~~~ggsL~~~l~~~---~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGl 651 (782)
.+|++|||+++++|.+++... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~--i~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK--VIHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHHHEEEccCCeEEECCCcc
Confidence 489999999999999998653 357899999999999999999999998 99999999999999999999999999
Q ss_pred CcccccccccccCCCCCCcccCcccccC-----CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-ccC
Q 003978 652 SRLKHETYLTTKTGKGTPQWMAPEVLRN-----EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-RLE 725 (782)
Q Consensus 652 a~~~~~~~~~~~~~~Gt~~y~aPE~l~~-----~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~-~~~ 725 (782)
+..............|++.|+|||++.. ..++.++|||||||+||+|++|..||...........+..... ...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 239 (275)
T cd06608 160 SAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLK 239 (275)
T ss_pred ceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCCC
Confidence 8765443333345568999999998754 3457789999999999999999999987655544444322111 222
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003978 726 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVD 757 (782)
Q Consensus 726 ~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~ 757 (782)
.+..++.++++||.+||..||++|||+.++++
T Consensus 240 ~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 240 SPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred chhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 23347889999999999999999999999953
No 289
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.2e-36 Score=325.09 Aligned_cols=257 Identities=28% Similarity=0.435 Sum_probs=213.5
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
.+.|.....||+|+||.||++.. .+..||||.+.... ......+.+|+.+++.++||||+++++.+...+..|+||
T Consensus 21 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~ 98 (292)
T cd06658 21 REYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVM 98 (292)
T ss_pred HHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch--HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEE
Confidence 34566667899999999999987 46789999886432 334566889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
||+++++|.+++.. ..+++..++.++.||+.||.|||+++ |+|+||||+||+++.++.++|+|||++.........
T Consensus 99 e~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~ 174 (292)
T cd06658 99 EFLEGGALTDIVTH--TRMNEEQIATVCLSVLRALSYLHNQG--VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK 174 (292)
T ss_pred eCCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcCCCCEEEccCcchhhccccccc
Confidence 99999999998864 35888999999999999999999998 999999999999999999999999998754333322
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-ccccCCCCCCCHHHHHHHHH
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM-NQRLEIPKDVDPRWAAIVES 740 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~-~~~~~~p~~~~~~l~~LI~~ 740 (782)
.....|++.|+|||.+.+..++.++|||||||++|+|++|..||...........+... .........++..+.+||.+
T Consensus 175 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 254 (292)
T cd06658 175 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDL 254 (292)
T ss_pred CceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHH
Confidence 33456899999999999888999999999999999999999999877766554443221 11222233578899999999
Q ss_pred hhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 741 CWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 741 cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
||..||.+|||+.++ ++++||+...+
T Consensus 255 ~l~~~P~~Rpt~~~i------l~~~~~~~~~~ 280 (292)
T cd06658 255 MLVREPSQRATAQEL------LQHPFLKLAGP 280 (292)
T ss_pred HccCChhHCcCHHHH------hhChhhhccCC
Confidence 999999999999999 56899975443
No 290
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.9e-36 Score=322.11 Aligned_cols=253 Identities=29% Similarity=0.448 Sum_probs=209.3
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
.++|++.+.||+|+||.||++... +..||+|++.... .......+.+|+++++.++||||+++++.+.....+|+||
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM 82 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence 468999999999999999999875 7789999986543 2445577889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhc-CCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 660 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~-~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 660 (782)
||+++++|.+++... ..+++..+..++.+++.+|.|||+ ++ ++|+||||+||++++++.++|+|||++.......
T Consensus 83 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~~--i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~- 158 (284)
T cd06620 83 EFMDCGSLDRIYKKG-GPIPVEILGKIAVAVVEGLTYLYNVHR--IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI- 158 (284)
T ss_pred ecCCCCCHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHhcC--eeccCCCHHHEEECCCCcEEEccCCcccchhhhc-
Confidence 999999999998764 368999999999999999999997 57 9999999999999999999999999986543221
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH-----------HHHHHhhccccccCCCC-
Q 003978 661 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM-----------QVIGAVGFMNQRLEIPK- 728 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~-----------~~~~~i~~~~~~~~~p~- 728 (782)
.....|+..|+|||++.+..++.++|||||||++|+|++|..||...... .....+. ......++.
T Consensus 159 -~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 236 (284)
T cd06620 159 -ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIV-QEPPPRLPSS 236 (284)
T ss_pred -cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHh-hccCCCCCch
Confidence 22457899999999998888899999999999999999999999865442 1111111 111222333
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 729 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 729 ~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
.++.++.+||.+||..||++||++.++ +.++||..
T Consensus 237 ~~~~~~~~li~~~l~~dp~~Rpt~~e~------~~~~~~~~ 271 (284)
T cd06620 237 DFPEDLRDFVDACLLKDPTERPTPQQL------CAMPPFIQ 271 (284)
T ss_pred hcCHHHHHHHHHHhcCCcccCcCHHHH------hcCccccc
Confidence 378899999999999999999999999 45566644
No 291
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=3.5e-36 Score=322.58 Aligned_cols=255 Identities=25% Similarity=0.319 Sum_probs=204.6
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCc-----
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQR----- 576 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~----- 576 (782)
++|++.+.||+|+||.||++.+ .++.||||+++...........+.+|+.+++.+. ||||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 4689999999999999999987 4678999998665433333456788999999995 6999999999877665
Q ss_pred eeEEEeecCCCCHHHHHhhc----CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC-CCcEEEEecCC
Q 003978 577 LCIVTEFLPRGSLFRLLQRN----TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-HWTVKVGDFGL 651 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~----~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~-~~~vkL~DFGl 651 (782)
+|++|||+++ +|.+++... ...+++..++.++.||+.||.|||+++ |+|+||||+||+++. ++.+||+|||+
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~--i~H~dl~~~nil~~~~~~~~kl~dfg~ 157 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG--VMHRDLKPQNLLVDKQKGLLKIADLGL 157 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChHHEEEecCCCeEEEeeccc
Confidence 8999999975 898888543 235799999999999999999999998 999999999999998 88999999999
Q ss_pred CcccccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc--------
Q 003978 652 SRLKHETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-------- 722 (782)
Q Consensus 652 a~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~-------- 722 (782)
+..............+++.|+|||.+.+ ..++.++|||||||++|+|++|..||...+.......+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (295)
T cd07837 158 GRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWP 237 (295)
T ss_pred ceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCc
Confidence 8755433222233457889999998865 4568999999999999999999999987765554333211100
Q ss_pred ------------------ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003978 723 ------------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 768 (782)
Q Consensus 723 ------------------~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~ 768 (782)
.....+.++.++.+||.+||..||.+||++.++ +.|+||+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~ei------l~~~~~~ 295 (295)
T cd07837 238 GVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAA------LTHPYFD 295 (295)
T ss_pred chhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHH------hcCCCcC
Confidence 000113578899999999999999999999999 6678774
No 292
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=4.9e-36 Score=331.15 Aligned_cols=253 Identities=26% Similarity=0.358 Sum_probs=205.4
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC------
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP------ 574 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------ 574 (782)
..++|++.+.||+|+||.||++.. .++.||||++.+..........+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 457899999999999999999987 577899999876544445556777899999999999999999988644
Q ss_pred CceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 575 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 575 ~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
...|+||||+. ++|.+.+... ++...+..++.|++.||+|||.++ |+|+||||+||+++.++.+||+|||++..
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~~g--i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 167 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD---LDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLART 167 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECCCCCEEEccCcccee
Confidence 34799999995 5888888643 888899999999999999999998 99999999999999999999999999986
Q ss_pred cccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc------------
Q 003978 655 KHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ------------ 722 (782)
Q Consensus 655 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~------------ 722 (782)
...... .....+++.|+|||.+.+..++.++|||||||++|+|++|+.||...+.......+.....
T Consensus 168 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
T cd07850 168 AGTSFM-MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQP 246 (353)
T ss_pred CCCCCC-CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhh
Confidence 544322 2344688999999999999999999999999999999999999987664332222210000
Q ss_pred --------cc---------------------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003978 723 --------RL---------------------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 768 (782)
Q Consensus 723 --------~~---------------------~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~ 768 (782)
.. ..+...+..+.+||.+||..||.+|||+.++ |.|+||+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ei------L~~~~~~ 315 (353)
T cd07850 247 TVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDA------LQHPYIN 315 (353)
T ss_pred hhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHH------hcChhHh
Confidence 00 0012346678999999999999999999999 5677775
No 293
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=5.3e-36 Score=318.28 Aligned_cols=255 Identities=28% Similarity=0.505 Sum_probs=212.5
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC---CCceeEEeeeeecCCceeEE
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR---HPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~---HpnIv~l~~~~~~~~~~~lv 580 (782)
.|++.+.||.|+||.||+|.+ .+..|++|++.... .......+.+|+.+++.+. ||||+++++++......|++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv 80 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT-PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII 80 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC-CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence 478889999999999999997 46789999986543 2334567788999999996 99999999999998999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 660 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 660 (782)
|||+++++|.+++... .+++..++.++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~~--i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06917 81 MEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIHKVG--VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS 156 (277)
T ss_pred EecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc
Confidence 9999999999998653 6889999999999999999999998 99999999999999999999999999876554433
Q ss_pred cccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCC-CCCHHHHHHH
Q 003978 661 TTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPK-DVDPRWAAIV 738 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~~l~~LI 738 (782)
......|+..|+|||.+.+ ..++.++|+|||||++|+|++|..||...........+... ....++. .++.++.+||
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i 235 (277)
T cd06917 157 KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS-KPPRLEDNGYSKLLREFV 235 (277)
T ss_pred ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC-CCCCCCcccCCHHHHHHH
Confidence 3344578999999998865 45688999999999999999999999877665544333211 2223333 3788999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 739 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 739 ~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
.+||..||++||++.++ +.++||+....
T Consensus 236 ~~~l~~~p~~R~~~~~i------l~~~~~~~~~~ 263 (277)
T cd06917 236 AACLDEEPKERLSAEEL------LKSKWIKAHSK 263 (277)
T ss_pred HHHcCCCcccCcCHHHH------hhChHhhcccc
Confidence 99999999999999999 56899976553
No 294
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=6.7e-36 Score=319.40 Aligned_cols=256 Identities=29% Similarity=0.503 Sum_probs=217.0
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
..+.|++.+.||+|+||.||++.+. +..+++|++..... ....+..|+++++.++|+||+++++.+......|++
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 93 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV 93 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence 4567889999999999999999985 77899999875443 446788899999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 660 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 660 (782)
|||+++++|.+++......+++..++.++.|++.||.|||+.| |+|+||||+||+++.++.++|+|||++........
T Consensus 94 ~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~g--i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 171 (286)
T cd06614 94 MEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQN--VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS 171 (286)
T ss_pred EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCChhhEEEcCCCCEEECccchhhhhccchh
Confidence 9999999999999876557899999999999999999999988 99999999999999999999999998865443322
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-ccCCCCCCCHHHHHHHH
Q 003978 661 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-RLEIPKDVDPRWAAIVE 739 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~-~~~~p~~~~~~l~~LI~ 739 (782)
......+++.|++||.+.+..++.++|+|||||++|+|++|..||...+.......+..... ....+..++..+++||.
T Consensus 172 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 251 (286)
T cd06614 172 KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLN 251 (286)
T ss_pred hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHH
Confidence 23344678899999999988899999999999999999999999987776554444322111 12223348899999999
Q ss_pred HhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 740 SCWHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 740 ~cL~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
+||..+|.+||++.++ +.++||+.
T Consensus 252 ~~l~~~p~~Rpt~~~i------l~~~~~~~ 275 (286)
T cd06614 252 KCLVKDPEKRPSAEEL------LQHPFLKK 275 (286)
T ss_pred HHhccChhhCcCHHHH------hhChHhhc
Confidence 9999999999999999 56788865
No 295
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=4.5e-36 Score=317.12 Aligned_cols=245 Identities=32% Similarity=0.589 Sum_probs=204.7
Q ss_pred eeccCCcEEEEEEEEcC--------CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 512 QIGQGSCGTVYHAVWYG--------SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 512 ~IG~G~~G~Vy~~~~~~--------~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
.||+|+||.||++.... ..++||.+.... .......+.+|+.+++.++||||+++++++......+++|||
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA-TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhccc-chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 68999999999998643 468999876433 223456788899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhc------CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC-----cEEEEecCCC
Q 003978 584 LPRGSLFRLLQRN------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW-----TVKVGDFGLS 652 (782)
Q Consensus 584 ~~ggsL~~~l~~~------~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~-----~vkL~DFGla 652 (782)
+++++|.+++... ...+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++ .++|+|||++
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH--FIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC--cccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 9999999999642 234788899999999999999999988 99999999999999877 8999999998
Q ss_pred ccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCC
Q 003978 653 RLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKD 729 (782)
Q Consensus 653 ~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~ 729 (782)
....... .......++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+....+. .......+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~ 237 (269)
T cd05044 159 RDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVT-AGGRLQKPEN 237 (269)
T ss_pred cccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHh-cCCccCCccc
Confidence 7543221 11223345788999999999889999999999999999998 999998877666554442 2334556677
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003978 730 VDPRWAAIVESCWHSDPQCRPSFQELVDKLR 760 (782)
Q Consensus 730 ~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~ 760 (782)
++..+.+||.+||..+|.+||++.++++.|+
T Consensus 238 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 238 CPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred chHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 8999999999999999999999999988875
No 296
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.2e-35 Score=314.70 Aligned_cols=253 Identities=31% Similarity=0.540 Sum_probs=209.9
Q ss_pred eeEeeeeccCCcEEEEEEEEc-----CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC------
Q 003978 507 LTIGEQIGQGSCGTVYHAVWY-----GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ------ 575 (782)
Q Consensus 507 y~i~~~IG~G~~G~Vy~~~~~-----~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------ 575 (782)
|++.+.||+|+||.||+|... +..||||++..........+.+.+|+++++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 677889999999999999753 467999999876666666778889999999999999999999876432
Q ss_pred ceeEEEeecCCCCHHHHHhhc-----CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecC
Q 003978 576 RLCIVTEFLPRGSLFRLLQRN-----TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFG 650 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~-----~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFG 650 (782)
..++++||+.+++|.+++... ...++...++.++.|++.||+|||+.+ |+|+||||+||+++.++.+||+|||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~nili~~~~~~kl~dfg 158 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN--FIHRDLAARNCMLNENMTVCVADFG 158 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeecccchhhEEEcCCCCEEECccc
Confidence 247889999999999887432 234788899999999999999999988 9999999999999999999999999
Q ss_pred CCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCC
Q 003978 651 LSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIP 727 (782)
Q Consensus 651 la~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p 727 (782)
+++...... .......+++.|++||.+.+..++.++|||||||++|+|++ |..||...+.......+.. ......+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~ 237 (273)
T cd05074 159 LSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIK-GNRLKQP 237 (273)
T ss_pred ccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHc-CCcCCCC
Confidence 987543221 12223345678999999998889999999999999999999 8999988776655544432 2234455
Q ss_pred CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 728 KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 728 ~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
...+..+.+++.+||..+|++||++.++++.|+++
T Consensus 238 ~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 238 PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 67889999999999999999999999999998865
No 297
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.2e-35 Score=314.18 Aligned_cols=252 Identities=25% Similarity=0.425 Sum_probs=209.7
Q ss_pred ceeEeeeeccCCcEEEEEEEEcC---CeEEEEEEeccC--------CCHHHHHHHHHHHHHHHh-CCCCceeEEeeeeec
Q 003978 506 DLTIGEQIGQGSCGTVYHAVWYG---SDVAVKVFSRQE--------YSDEVIHSFRQEVSLMKR-LRHPNVLLFMGAVTS 573 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~~~---~~vAiK~~~~~~--------~~~~~~~~~~~Ei~il~~-l~HpnIv~l~~~~~~ 573 (782)
.|++.+.||+|+||.||++...+ ..+|+|.+.... ........+..|+.++.. ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999999854 679999875432 233455667788888875 799999999999999
Q ss_pred CCceeEEEeecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHhhhc-CCCCeeecCCCCCcEEEcCCCcEEEEec
Q 003978 574 PQRLCIVTEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHWTVKVGDF 649 (782)
Q Consensus 574 ~~~~~lv~E~~~ggsL~~~l~~---~~~~l~~~~~~~i~~qll~aL~~LH~-~~~~ivHrDIKp~NILl~~~~~vkL~DF 649 (782)
++..+++|||+++++|.+++.. ....+++..++.++.|++.+|.|||. .+ |+|+||||+||+++.++.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~--i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR--IVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc--eeecCCCHHHEEECCCCcEEEecc
Confidence 9999999999999999988743 34568999999999999999999996 66 999999999999999999999999
Q ss_pred CCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCC
Q 003978 650 GLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKD 729 (782)
Q Consensus 650 Gla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~ 729 (782)
|++....... ......|+..|++||.+.+..++.++||||||+++|+|++|..||...........+......+.....
T Consensus 159 g~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (269)
T cd08528 159 GLAKQKQPES-KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGM 237 (269)
T ss_pred cceeeccccc-ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCccc
Confidence 9987654432 233456899999999999888999999999999999999999999877766555554332222222336
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003978 730 VDPRWAAIVESCWHSDPQCRPSFQELVDKLR 760 (782)
Q Consensus 730 ~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~ 760 (782)
+++.+.+||.+||..||++||++.++...+.
T Consensus 238 ~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 238 YSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred CCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 7899999999999999999999999988764
No 298
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.3e-35 Score=314.05 Aligned_cols=245 Identities=30% Similarity=0.511 Sum_probs=194.9
Q ss_pred eeeccCCcEEEEEEEEc----CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCC
Q 003978 511 EQIGQGSCGTVYHAVWY----GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPR 586 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~~----~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~g 586 (782)
+.||+|+||.||+|... ...+++|.+.... .......+.+|+.+++.++||||+++++.+.....+|+||||+++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA-TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPL 79 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC-ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCC
Confidence 36899999999999753 2357777765432 334456778899999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCC----cchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc--cc
Q 003978 587 GSLFRLLQRNTT----KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET--YL 660 (782)
Q Consensus 587 gsL~~~l~~~~~----~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~--~~ 660 (782)
++|.+++..... ..++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++...... ..
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD--FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC--EecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 999999976432 2457778899999999999999998 999999999999999999999999998643221 11
Q ss_pred cccCCCCCCcccCcccccC-------CCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccc----ccCCCC
Q 003978 661 TTKTGKGTPQWMAPEVLRN-------EPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQ----RLEIPK 728 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~~-------~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~----~~~~p~ 728 (782)
......+++.|+|||++.. ..++.++|||||||++|+|++ |..||...........+..... .+.++.
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDL 237 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccc
Confidence 1223346778999999743 456789999999999999999 8899988776655444322211 223445
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003978 729 DVDPRWAAIVESCWHSDPQCRPSFQELVDKL 759 (782)
Q Consensus 729 ~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L 759 (782)
.++..+.+++..|| .||++||++.++++.|
T Consensus 238 ~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 238 KYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred cCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 68899999999999 5999999999998775
No 299
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=6.7e-36 Score=315.98 Aligned_cols=238 Identities=21% Similarity=0.413 Sum_probs=194.2
Q ss_pred eeeccCCcEEEEEEEEc--------------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc
Q 003978 511 EQIGQGSCGTVYHAVWY--------------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 576 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~~--------------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 576 (782)
+.||+|+||.||++... ...+++|++.... ......+.+|+.+++.++||||+++++++..+..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~ 78 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVE 78 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 46899999999999752 1247888865432 3345678889999999999999999999999889
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc-------EEEEec
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT-------VKVGDF 649 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~-------vkL~DF 649 (782)
.+++|||+++++|..++......+++..++.++.||+.||+|||+++ |+||||||+||||+.++. ++++||
T Consensus 79 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 79 NIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKD--LVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred CEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCC--eECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 99999999999999998766667899999999999999999999998 999999999999987654 899999
Q ss_pred CCCcccccccccccCCCCCCcccCccccc-CCCCCchhHHHHHHHHHHHHH-cCCCCCCCCChHHHHHHhhccccccCCC
Q 003978 650 GLSRLKHETYLTTKTGKGTPQWMAPEVLR-NEPSDEKSDVYSFGVILWELA-TEKIPWDNLNSMQVIGAVGFMNQRLEIP 727 (782)
Q Consensus 650 Gla~~~~~~~~~~~~~~Gt~~y~aPE~l~-~~~~s~~sDIwSLG~ll~ell-tG~~Pf~~~~~~~~~~~i~~~~~~~~~p 727 (782)
|++...... ....++..|+|||++. +..++.++|||||||++|+|+ +|..||............ .......
T Consensus 157 g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~---~~~~~~~ 229 (262)
T cd05077 157 GIPITVLSR----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFY---EGQCMLV 229 (262)
T ss_pred CCCccccCc----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHH---hcCccCC
Confidence 988644321 2345788999999987 566889999999999999997 589999776544332211 1222233
Q ss_pred CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003978 728 KDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 759 (782)
Q Consensus 728 ~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L 759 (782)
...+.++.+||.+||..||.+||++.+|++.|
T Consensus 230 ~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 230 TPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred CCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 44568899999999999999999999998775
No 300
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=6.5e-36 Score=320.33 Aligned_cols=253 Identities=26% Similarity=0.364 Sum_probs=200.7
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
++|++.+.||+|+||.||+|.. .+..|+||++...... .....+.+|+.+++.++|+||+++++++..+...|+|||
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 83 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE-GVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE 83 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC-CCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence 5799999999999999999986 4778999998654322 222355689999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
|+. ++|.+++......+++..+..++.|++.||.|||+++ |+|+||||+|||++.++.+||+|||+++.........
T Consensus 84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 160 (291)
T cd07870 84 YMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQH--ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTY 160 (291)
T ss_pred ccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHHEEEcCCCcEEEeccccccccCCCCCCC
Confidence 995 6888777665556788888999999999999999998 9999999999999999999999999987544333333
Q ss_pred cCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHH-HHHHhhc-cc------------------
Q 003978 663 KTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQ-VIGAVGF-MN------------------ 721 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~-~~~~i~~-~~------------------ 721 (782)
....+++.|+|||.+.+. .++.++|||||||++|+|++|..||....... .+..+.. ..
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (291)
T cd07870 161 SSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKP 240 (291)
T ss_pred CCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccc
Confidence 344678999999998764 47889999999999999999999997655321 1111100 00
Q ss_pred c--ccCCC---------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 722 Q--RLEIP---------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 722 ~--~~~~p---------~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
. ....+ ...++.+.+||.+||..||.+|||+.++ +.|+||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~------l~h~~~ 291 (291)
T cd07870 241 EWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDA------LLHPYF 291 (291)
T ss_pred hhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHH------hcCCCC
Confidence 0 00000 0135789999999999999999999999 556665
No 301
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.1e-35 Score=319.16 Aligned_cols=258 Identities=25% Similarity=0.357 Sum_probs=207.9
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
++|++.+.||.|.+|.||++.. .++.||||.+............+.+|+++++.++||||+++++++.....+|+|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 5799999999999999999987 46789999986654433445677889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC-CCcEEEEecCCCcccccccc
Q 003978 583 FLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-HWTVKVGDFGLSRLKHETYL 660 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~-~~~vkL~DFGla~~~~~~~~ 660 (782)
|++ ++|.+++.... ..+++..++.++.||+.||+|||+++ |+|+||||+||+++. ++.+||+|||++........
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~ 158 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR--VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR 158 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCcceEEEECCCCEEEEcccccccccCCCcc
Confidence 995 58888875433 33678888899999999999999998 999999999999985 56799999999975543322
Q ss_pred cccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc----------------
Q 003978 661 TTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR---------------- 723 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~---------------- 723 (782)
......+++.|+|||++.+ ..++.++|||||||++|+|++|..||...........+......
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (294)
T PLN00009 159 TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYK 238 (294)
T ss_pred ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhh
Confidence 2234467899999999876 45788999999999999999999999876654443332110000
Q ss_pred -----------cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 724 -----------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 724 -----------~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
....+.+++++.++|.+||..+|++||++.++ +.++||....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~------l~~~~~~~~~ 291 (294)
T PLN00009 239 SAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAA------LEHEYFKDLG 291 (294)
T ss_pred hhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHH------hcCchHhHHh
Confidence 00124578899999999999999999999999 5689987654
No 302
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.7e-35 Score=313.43 Aligned_cols=245 Identities=30% Similarity=0.441 Sum_probs=194.7
Q ss_pred eeeccCCcEEEEEEEEcC----CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCC
Q 003978 511 EQIGQGSCGTVYHAVWYG----SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPR 586 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~~~----~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~g 586 (782)
+.||+|+||.||+|...+ ..+++|.++.... ......+.+|+.+++.++||||+++++++.....+++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPL 79 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCC
Confidence 368999999999998643 3589998765543 23335678899999999999999999999998999999999999
Q ss_pred CCHHHHHhhcC----CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc--c
Q 003978 587 GSLFRLLQRNT----TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY--L 660 (782)
Q Consensus 587 gsL~~~l~~~~----~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~--~ 660 (782)
++|.+++.... ...++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++....... .
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN--FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC--EeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 99999996432 23566778889999999999999998 9999999999999999999999999987543321 1
Q ss_pred cccCCCCCCcccCcccccCC-------CCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcc-cc---ccCCCC
Q 003978 661 TTKTGKGTPQWMAPEVLRNE-------PSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFM-NQ---RLEIPK 728 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~~~-------~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~-~~---~~~~p~ 728 (782)
......+++.|+|||++.+. .++.++|||||||++|+|++ |..||......+........ .. .+.+..
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKL 237 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCC
Confidence 22234578899999998643 34779999999999999996 99999877665543332111 11 122233
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003978 729 DVDPRWAAIVESCWHSDPQCRPSFQELVDKL 759 (782)
Q Consensus 729 ~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L 759 (782)
..+..+.++|.+|| .+|++|||+++|+..|
T Consensus 238 ~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l 267 (269)
T cd05087 238 PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLL 267 (269)
T ss_pred CCChHHHHHHHHHh-cCcccCCCHHHHHHHh
Confidence 57789999999999 6899999999998765
No 303
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=7e-36 Score=313.34 Aligned_cols=236 Identities=25% Similarity=0.443 Sum_probs=194.6
Q ss_pred eeeccCCcEEEEEEEEcCCe------------EEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 511 EQIGQGSCGTVYHAVWYGSD------------VAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~~~~~------------vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
+.||+|+||.||++...... +++|++...... ...+.+|+.+++.++||||+++++++.. ...+
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 76 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD---SLAFFETASLMSQLSHKHLVKLYGVCVR-DENI 76 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh---HHHHHHHHHHHHcCCCcchhheeeEEec-CCcE
Confidence 46999999999999885433 677776543321 5678889999999999999999999887 7789
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC-------cEEEEecCC
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW-------TVKVGDFGL 651 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~-------~vkL~DFGl 651 (782)
+||||+.+++|.+++......+++..++.++.||+.||.|||+++ |+|+||||+|||++.++ .+||+|||+
T Consensus 77 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 77 MVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKK--LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC--eecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 999999999999999876657899999999999999999999988 99999999999999887 799999999
Q ss_pred CcccccccccccCCCCCCcccCcccccCC--CCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCC
Q 003978 652 SRLKHETYLTTKTGKGTPQWMAPEVLRNE--PSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPK 728 (782)
Q Consensus 652 a~~~~~~~~~~~~~~Gt~~y~aPE~l~~~--~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~ 728 (782)
+..... .....++..|+|||++.+. .++.++|||||||++|+|++ |..||............. .....+.
T Consensus 155 a~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~---~~~~~~~ 227 (259)
T cd05037 155 PITVLS----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ---DQHRLPM 227 (259)
T ss_pred cccccc----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh---cCCCCCC
Confidence 875443 2234567889999999876 78899999999999999999 688887775433322221 2222233
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003978 729 DVDPRWAAIVESCWHSDPQCRPSFQELVDKL 759 (782)
Q Consensus 729 ~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L 759 (782)
.....+.+||.+||..+|.+||++.++++.|
T Consensus 228 ~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 228 PDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred CCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 3348999999999999999999999998876
No 304
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=4.3e-36 Score=325.51 Aligned_cols=245 Identities=25% Similarity=0.371 Sum_probs=187.9
Q ss_pred eeeeccCCcEEEEEEEEc----CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeee--cCCceeEEEee
Q 003978 510 GEQIGQGSCGTVYHAVWY----GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT--SPQRLCIVTEF 583 (782)
Q Consensus 510 ~~~IG~G~~G~Vy~~~~~----~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~--~~~~~~lv~E~ 583 (782)
+.+||+|+||.||+|... +..||+|.+...... ..+.+|+.+++.++||||+++++++. .+..+|++|||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGIS----MSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCc----HHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 468999999999999864 356999998654432 34678999999999999999999885 35678999999
Q ss_pred cCCCCHHHHHhhc--------CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE----cCCCcEEEEecCC
Q 003978 584 LPRGSLFRLLQRN--------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV----DKHWTVKVGDFGL 651 (782)
Q Consensus 584 ~~ggsL~~~l~~~--------~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl----~~~~~vkL~DFGl 651 (782)
+. ++|.+++... ...+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 82 AE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred eC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC--EEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 95 5888877432 234788899999999999999999998 9999999999999 4567899999999
Q ss_pred Ccccccccc---cccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChH----------HHHHHh
Q 003978 652 SRLKHETYL---TTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSM----------QVIGAV 717 (782)
Q Consensus 652 a~~~~~~~~---~~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~----------~~~~~i 717 (782)
++....... ......||+.|+|||++.+. .++.++|||||||++|+|+||.+||...... +....+
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07867 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIF 238 (317)
T ss_pred eeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHH
Confidence 976543321 12244689999999998774 5789999999999999999999999643321 000000
Q ss_pred hccc-------------------------c----------ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 718 GFMN-------------------------Q----------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 718 ~~~~-------------------------~----------~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
.... . ........+..+.+||.+||..||.+|||+.|+ |
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~------l 312 (317)
T cd07867 239 SVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQA------L 312 (317)
T ss_pred HhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHH------h
Confidence 0000 0 000111245678899999999999999999999 5
Q ss_pred HHHHh
Q 003978 763 QRQYF 767 (782)
Q Consensus 763 ~~~~~ 767 (782)
+|+||
T Consensus 313 ~hp~f 317 (317)
T cd07867 313 QDPYF 317 (317)
T ss_pred cCCCC
Confidence 66765
No 305
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-37 Score=331.74 Aligned_cols=244 Identities=27% Similarity=0.426 Sum_probs=209.7
Q ss_pred eeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCCC
Q 003978 510 GEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRG 587 (782)
Q Consensus 510 ~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg 587 (782)
.+.||.|.||+||-|.+ .|+.||||++.+.++..+....+++|+.||+.+.||.||.+...|+..+++++|||.+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 37899999999999976 6889999999998887766788999999999999999999999999999999999999665
Q ss_pred CHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC---CcEEEEecCCCcccccccccccC
Q 003978 588 SLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH---WTVKVGDFGLSRLKHETYLTTKT 664 (782)
Q Consensus 588 sL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~---~~vkL~DFGla~~~~~~~~~~~~ 664 (782)
-|.-+|.....++++....+++.||+.||.|||.++ |+|+||||+|||+... -++||||||+|+..++..... +
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn--IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRr-s 725 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN--IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRR-S 725 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc--eeeccCCchheeeccCCCCCceeeccccceeecchhhhhh-h
Confidence 555556666788999999999999999999999999 9999999999999754 469999999999888765443 5
Q ss_pred CCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhh
Q 003978 665 GKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHS 744 (782)
Q Consensus 665 ~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~ 744 (782)
.+|||.|+|||++.++.|+..-|+||+|+++|--+.|..||.........-+-.....++.....+++++.+||..+|+.
T Consensus 726 VVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqV 805 (888)
T KOG4236|consen 726 VVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQV 805 (888)
T ss_pred hcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCCCchhhcCHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999765443221111222334444457899999999999999
Q ss_pred CCCCCCCHHHHH
Q 003978 745 DPQCRPSFQELV 756 (782)
Q Consensus 745 dP~~RPs~~ell 756 (782)
+-.+|.|++..+
T Consensus 806 km~kRysvdk~l 817 (888)
T KOG4236|consen 806 KMRKRYSVDKSL 817 (888)
T ss_pred HHHHhcchHhhc
Confidence 999999998873
No 306
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=3e-36 Score=317.43 Aligned_cols=238 Identities=24% Similarity=0.443 Sum_probs=197.1
Q ss_pred eeeccCCcEEEEEEEEcC---------CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 511 EQIGQGSCGTVYHAVWYG---------SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~~~---------~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
+.||.|+||.||+|.... ..+++|.+.... ......+..|+.+++.+.||||+++++++..+...++||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 78 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQ 78 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEE
Confidence 369999999999997632 237778764322 334567888999999999999999999999989999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc--------EEEEecCCCc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT--------VKVGDFGLSR 653 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~--------vkL~DFGla~ 653 (782)
||+++++|..++..+...+++..++.++.||+.||+|||+++ |+||||||+||+++.++. ++++|||++.
T Consensus 79 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 79 EYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKG--LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred ecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 999999999999876667899999999999999999999998 999999999999987654 6999999886
Q ss_pred ccccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcC-CCCCCCCChHHHHHHhhccccccCCCCCCC
Q 003978 654 LKHETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATE-KIPWDNLNSMQVIGAVGFMNQRLEIPKDVD 731 (782)
Q Consensus 654 ~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG-~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~ 731 (782)
.... .....+++.|+|||++.+ ..++.++|||||||++|+|++| ..||........... ......+|...+
T Consensus 157 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 229 (258)
T cd05078 157 TVLP----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQF---YEDRHQLPAPKW 229 (258)
T ss_pred ccCC----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHH---HHccccCCCCCc
Confidence 4432 123467889999999986 4578899999999999999998 577766655443322 223455666778
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003978 732 PRWAAIVESCWHSDPQCRPSFQELVDKL 759 (782)
Q Consensus 732 ~~l~~LI~~cL~~dP~~RPs~~ell~~L 759 (782)
.++.+||.+||+.||++|||+.++++.|
T Consensus 230 ~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 230 TELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred HHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 8999999999999999999999998876
No 307
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=7.3e-36 Score=321.87 Aligned_cols=255 Identities=27% Similarity=0.425 Sum_probs=212.3
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
..|.....||+|+||.||++.. .++.||||++...... ....+.+|+.+++.++||||+++++.+..++..|++||
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e 98 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQ--RRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLME 98 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccc--hHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEe
Confidence 3455566899999999999987 4778999998654322 23567889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
|+++++|..++.. ..+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||++..........
T Consensus 99 ~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~--ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~ 174 (297)
T cd06659 99 FLQGGALTDIVSQ--TRLNEEQIATVCESVLQALCYLHSQG--VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR 174 (297)
T ss_pred cCCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHeEEccCCcEEEeechhHhhcccccccc
Confidence 9999999998864 35889999999999999999999998 9999999999999999999999999987544433333
Q ss_pred cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-cccCCCCCCCHHHHHHHHHh
Q 003978 663 KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN-QRLEIPKDVDPRWAAIVESC 741 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~-~~~~~p~~~~~~l~~LI~~c 741 (782)
....|++.|+|||++.+..++.++|||||||++|+|++|..||...........+.... .....+..++..+.++|.+|
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 254 (297)
T cd06659 175 KSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERM 254 (297)
T ss_pred cceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHH
Confidence 34578999999999998889999999999999999999999998776655554443211 12233456788999999999
Q ss_pred hhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 742 WHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 742 L~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
|..+|.+||++.++ ++++||....
T Consensus 255 l~~~P~~Rps~~~l------l~~~~~~~~~ 278 (297)
T cd06659 255 LTREPQERATAQEL------LDHPFLLQTG 278 (297)
T ss_pred hcCCcccCcCHHHH------hhChhhccCC
Confidence 99999999999999 5568876543
No 308
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.5e-35 Score=317.33 Aligned_cols=255 Identities=28% Similarity=0.449 Sum_probs=213.2
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
.|...+.||+|++|.||++.. .++.+++|++.... ......+.+|+.+++.+.||||+++++++...+..|+++||
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~ 97 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK--QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEF 97 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc--hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEec
Confidence 455567999999999999986 46779999886432 23345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccccc
Q 003978 584 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTK 663 (782)
Q Consensus 584 ~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 663 (782)
+.+++|.+++.. .++++..+..++.|++.||+|||+++ |+|+||||+||+++.++.++|+|||++...........
T Consensus 98 ~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~ 173 (285)
T cd06648 98 LEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQG--VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRK 173 (285)
T ss_pred cCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCChhhEEEcCCCcEEEcccccchhhccCCcccc
Confidence 999999999976 45889999999999999999999998 99999999999999999999999998765443322233
Q ss_pred CCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-ccCCCCCCCHHHHHHHHHhh
Q 003978 664 TGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-RLEIPKDVDPRWAAIVESCW 742 (782)
Q Consensus 664 ~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~-~~~~p~~~~~~l~~LI~~cL 742 (782)
...|++.|+|||.+.+..++.++|||||||++|+|++|..||...+.......+..... ....+..++..+.+||.+||
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 253 (285)
T cd06648 174 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRML 253 (285)
T ss_pred cccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHc
Confidence 45689999999999988899999999999999999999999987776655554432211 12223347899999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 743 HSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 743 ~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
..+|++||++.++ +.|+||+..+.
T Consensus 254 ~~~p~~Rpt~~~i------l~~~~~~~~~~ 277 (285)
T cd06648 254 VRDPAQRATAAEL------LNHPFLAKAGP 277 (285)
T ss_pred ccChhhCcCHHHH------ccCcccccCCC
Confidence 9999999999999 57899977664
No 309
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=9.5e-36 Score=321.06 Aligned_cols=259 Identities=22% Similarity=0.300 Sum_probs=204.6
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC--
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ-- 575 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~-- 575 (782)
+....++|++.++||+|+||.||++.. .+..||||.+............+.+|+++++.++||||+++++++....
T Consensus 7 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (310)
T cd07865 7 FCDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATP 86 (310)
T ss_pred ccchhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccc
Confidence 334456899999999999999999987 4678999998755433333345667999999999999999999876544
Q ss_pred ------ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEec
Q 003978 576 ------RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDF 649 (782)
Q Consensus 576 ------~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DF 649 (782)
..|+||||+. ++|.+++......+++..++.++.||+.||.|||+++ ++|+||||+||+++.++.+||+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dl~p~nil~~~~~~~kl~df 163 (310)
T cd07865 87 YNRYKGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNK--ILHRDMKAANILITKDGILKLADF 163 (310)
T ss_pred ccCCCceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEECCCCcEEECcC
Confidence 3599999995 5898888766557899999999999999999999998 999999999999999999999999
Q ss_pred CCCcccccccc----cccCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc-
Q 003978 650 GLSRLKHETYL----TTKTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR- 723 (782)
Q Consensus 650 Gla~~~~~~~~----~~~~~~Gt~~y~aPE~l~~~~-~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~- 723 (782)
|++........ ......++..|+|||.+.+.. ++.++||||||+++|+|++|..||...+.......+......
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T cd07865 164 GLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSI 243 (310)
T ss_pred CCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 99875433221 112345788999999887644 688999999999999999999999877655443332221110
Q ss_pred ----------------cCCC-------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 724 ----------------LEIP-------------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 724 ----------------~~~p-------------~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
..++ ...+..+.+||.+||..||.+|||+.++ |.|+||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~------l~h~~f 310 (310)
T cd07865 244 TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTA------LNHDFF 310 (310)
T ss_pred ChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHH------hcCCCC
Confidence 0011 1235678899999999999999999999 556665
No 310
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=7.1e-36 Score=318.28 Aligned_cols=247 Identities=27% Similarity=0.353 Sum_probs=202.6
Q ss_pred eeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeec
Q 003978 507 LTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFL 584 (782)
Q Consensus 507 y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~ 584 (782)
|++.+.||.|++|.||++.+ .+..|++|++............+.+|+++++.++||||+++++++...+..|++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 67789999999999999987 5788999998765444444456778999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccccc
Q 003978 585 PRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTK 663 (782)
Q Consensus 585 ~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 663 (782)
+ ++|.+++.... ..+++..++.++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++...........
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~--~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 157 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR--VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYT 157 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccC
Confidence 4 69999987644 46899999999999999999999988 99999999999999999999999999875543322223
Q ss_pred CCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc---------------------
Q 003978 664 TGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN--------------------- 721 (782)
Q Consensus 664 ~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~--------------------- 721 (782)
...+++.|+|||++.+. .++.++|||||||++|+|++|..||...+.......+....
T Consensus 158 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd07835 158 HEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTF 237 (283)
T ss_pred ccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhc
Confidence 34568899999988764 46889999999999999999999998766543332221100
Q ss_pred ------cccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHH
Q 003978 722 ------QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELV 756 (782)
Q Consensus 722 ------~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell 756 (782)
......+.++..+.+||.+||..||.+||++.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il 278 (283)
T cd07835 238 PKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAAL 278 (283)
T ss_pred ccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 00112345778999999999999999999999994
No 311
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.1e-35 Score=316.34 Aligned_cols=249 Identities=24% Similarity=0.373 Sum_probs=205.2
Q ss_pred eccCCcEEEEEEEE--cCCeEEEEEEeccCCC-HHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCCCCH
Q 003978 513 IGQGSCGTVYHAVW--YGSDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSL 589 (782)
Q Consensus 513 IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ggsL 589 (782)
||+|+||.||+|.. .++.||+|++...... ......+..|+++++.++||||+++++.+...+.+|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 69999999999986 4778999998764432 23345667899999999999999999999999999999999999999
Q ss_pred HHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCCCC
Q 003978 590 FRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGT 668 (782)
Q Consensus 590 ~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt 668 (782)
.+++.... ..+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++...... .......++
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~ 157 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR--IVYRDLKPENVLLDDHGNVRISDLGLAVELKGG-KKIKGRAGT 157 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCCCCEEEccCcchhhhccC-CccccccCC
Confidence 99986543 36899999999999999999999998 999999999999999999999999998754432 222344678
Q ss_pred CcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhh--ccccccCCCCCCCHHHHHHHHHhhhhCC
Q 003978 669 PQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVG--FMNQRLEIPKDVDPRWAAIVESCWHSDP 746 (782)
Q Consensus 669 ~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~--~~~~~~~~p~~~~~~l~~LI~~cL~~dP 746 (782)
..|++||.+.+..++.++|||||||++|+|++|+.||...........+. ........+..+++.+.++|.+||..||
T Consensus 158 ~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 237 (277)
T cd05577 158 PGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDP 237 (277)
T ss_pred CCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCCh
Confidence 89999999988889999999999999999999999997664421111111 1223455667789999999999999999
Q ss_pred CCCC-----CHHHHHHHHHHHHHHHhhcc
Q 003978 747 QCRP-----SFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 747 ~~RP-----s~~ell~~L~~L~~~~~~~~ 770 (782)
.+|| ++.++ +.|+||+..
T Consensus 238 ~~R~~~~~~~~~~l------l~h~~~~~~ 260 (277)
T cd05577 238 EKRLGCRGGSADEV------REHPLFKDL 260 (277)
T ss_pred hHccCCCcccHHHH------HhChhhhcC
Confidence 9999 66667 468888543
No 312
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=3.2e-35 Score=305.30 Aligned_cols=246 Identities=33% Similarity=0.558 Sum_probs=210.7
Q ss_pred ceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
+|.+.+.||+|++|.||++... +..+++|++..... .....+.+|+.+++.++|+||+++++++..+...++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~ 78 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEF 78 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEec
Confidence 4788999999999999999985 67899999876543 3457788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccccc
Q 003978 584 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTK 663 (782)
Q Consensus 584 ~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 663 (782)
+++++|.+++......+++..+..++.|++.+|.|||..+ ++|+||+|+||+++.++.++|+|||.+........ ..
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~ 155 (253)
T cd05122 79 CSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNG--IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-RN 155 (253)
T ss_pred CCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCC--EecCCCCHHHEEEccCCeEEEeecccccccccccc-cc
Confidence 9999999999876567899999999999999999999988 99999999999999999999999999876554322 33
Q ss_pred CCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCC--CCCHHHHHHHHHh
Q 003978 664 TGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPK--DVDPRWAAIVESC 741 (782)
Q Consensus 664 ~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~--~~~~~l~~LI~~c 741 (782)
...++..|++||.+.+..++.++||||||+++|+|++|..||...+.......+.. ......+. .++..+.+||.+|
T Consensus 156 ~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~ 234 (253)
T cd05122 156 TMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT-NGPPGLRNPEKWSDEFKDFLKKC 234 (253)
T ss_pred ceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh-cCCCCcCcccccCHHHHHHHHHH
Confidence 45688999999999988889999999999999999999999988765555444432 22222332 3489999999999
Q ss_pred hhhCCCCCCCHHHHHH
Q 003978 742 WHSDPQCRPSFQELVD 757 (782)
Q Consensus 742 L~~dP~~RPs~~ell~ 757 (782)
|..||++|||+.++++
T Consensus 235 l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 235 LQKNPEKRPTAEQLLK 250 (253)
T ss_pred ccCChhhCCCHHHHhc
Confidence 9999999999999964
No 313
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=9.6e-36 Score=317.90 Aligned_cols=248 Identities=24% Similarity=0.401 Sum_probs=198.7
Q ss_pred eeccCCcEEEEEEEE--cCCeEEEEEEeccCCCH-HHHHHHHHHHHHH---HhCCCCceeEEeeeeecCCceeEEEeecC
Q 003978 512 QIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSD-EVIHSFRQEVSLM---KRLRHPNVLLFMGAVTSPQRLCIVTEFLP 585 (782)
Q Consensus 512 ~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~-~~~~~~~~Ei~il---~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ 585 (782)
.||+|+||.||++.. .++.+|+|++....... .....+.+|..++ ...+||||+.+++++..++..|+||||+.
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999987 46789999987654322 1122233444333 34479999999999999999999999999
Q ss_pred CCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCC
Q 003978 586 RGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTG 665 (782)
Q Consensus 586 ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 665 (782)
+++|.+++.... .+++..+..++.|++.||.|||+++ |+|+||||+|||++.++.++|+|||++....... ....
T Consensus 81 ~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~~--ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~--~~~~ 155 (279)
T cd05633 81 GGDLHYHLSQHG-VFSEKEMRFYATEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--PHAS 155 (279)
T ss_pred CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--cCCCCCCHHHEEECCCCCEEEccCCcceeccccC--ccCc
Confidence 999999987643 6899999999999999999999999 9999999999999999999999999986543321 2234
Q ss_pred CCCCcccCccccc-CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH--HHHHhhccccccCCCCCCCHHHHHHHHHhh
Q 003978 666 KGTPQWMAPEVLR-NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ--VIGAVGFMNQRLEIPKDVDPRWAAIVESCW 742 (782)
Q Consensus 666 ~Gt~~y~aPE~l~-~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~--~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL 742 (782)
.|++.|+|||.+. +..++.++|||||||++|+|++|..||....... ..... .......++..+++++++||.+||
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l 234 (279)
T cd05633 156 VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM-TLTVNVELPDSFSPELKSLLEGLL 234 (279)
T ss_pred CCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHH-hhcCCcCCccccCHHHHHHHHHHh
Confidence 6899999999986 4667899999999999999999999997543221 11111 123345677789999999999999
Q ss_pred hhCCCCCC-----CHHHHHHHHHHHHHHHhhccc
Q 003978 743 HSDPQCRP-----SFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 743 ~~dP~~RP-----s~~ell~~L~~L~~~~~~~~~ 771 (782)
..||.+|| ++.++ ++|+||+..+
T Consensus 235 ~~~p~~R~~~~~~~~~~~------~~h~~~~~~~ 262 (279)
T cd05633 235 QRDVSKRLGCLGRGAQEV------KEHVFFKGID 262 (279)
T ss_pred cCCHHHhcCCCCCCHHHH------HhCccccCCC
Confidence 99999999 59988 6778887644
No 314
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=7.2e-36 Score=316.65 Aligned_cols=247 Identities=27% Similarity=0.492 Sum_probs=213.1
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCceeEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lv 580 (782)
++|.+.+.||.|+||.||++.. .+..|++|++..... .......+.+|+.+++.+. ||||+++++++...+..+++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 4799999999999999999987 577899999876443 3344567888999999998 99999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc-
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY- 659 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~- 659 (782)
|||+.+++|.+++.... .+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh~~~--~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~ 157 (280)
T cd05581 81 LEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLHSKG--IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSS 157 (280)
T ss_pred EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECCCCCEEecCCccccccCCccc
Confidence 99999999999997654 6999999999999999999999998 9999999999999999999999999987544322
Q ss_pred -------------------ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc
Q 003978 660 -------------------LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM 720 (782)
Q Consensus 660 -------------------~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~ 720 (782)
.......|+..|++||++.+..++.++|||||||++|+|++|..||...........+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-- 235 (280)
T cd05581 158 PESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKIL-- 235 (280)
T ss_pred cccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH--
Confidence 12223457899999999988888999999999999999999999999887655554442
Q ss_pred ccccCCCCCCCHHHHHHHHHhhhhCCCCCCCH----HHHH
Q 003978 721 NQRLEIPKDVDPRWAAIVESCWHSDPQCRPSF----QELV 756 (782)
Q Consensus 721 ~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~----~ell 756 (782)
.....++..+++.+.+||.+||..+|.+||++ .+++
T Consensus 236 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll 275 (280)
T cd05581 236 KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELK 275 (280)
T ss_pred hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHh
Confidence 34456777889999999999999999999999 8883
No 315
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=9.4e-36 Score=326.80 Aligned_cols=262 Identities=24% Similarity=0.326 Sum_probs=209.9
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC-----Cc
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP-----QR 576 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-----~~ 576 (782)
.++|++.+.||+|+||.||++.. .+..||||.+............+.+|+.+++.++||||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 35799999999999999999987 467899999875433333445677899999999999999999987644 34
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
+|++|||+. ++|.+++... ..+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++....
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~--i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 159 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS-QTLSDDHCQYFLYQLLRGLKYIHSAN--VLHRDLKPSNLLLNANCDLKICDFGLARTTS 159 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCCCCEEECcCccccccC
Confidence 799999995 6899998764 46899999999999999999999998 9999999999999999999999999997654
Q ss_pred cccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc---------------
Q 003978 657 ETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM--------------- 720 (782)
Q Consensus 657 ~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~--------------- 720 (782)
..........++..|+|||.+.+ ..++.++|||||||++|+|++|..||...+.......+...
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd07858 160 EKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNE 239 (337)
T ss_pred CCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCch
Confidence 43222334467899999998865 45889999999999999999999999766543322211100
Q ss_pred ---------cc-----ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcCC
Q 003978 721 ---------NQ-----RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVG 775 (782)
Q Consensus 721 ---------~~-----~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~~ 775 (782)
.. .....+.+++++.+||.+||..+|.+|||+.++ +.|+||+..+..-.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~el------l~h~~~~~~~~~~~ 302 (337)
T cd07858 240 KARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEA------LAHPYLASLHDPSD 302 (337)
T ss_pred hhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHH------HcCcchhhhcCccc
Confidence 00 011234678999999999999999999999999 67788876554433
No 316
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-37 Score=326.72 Aligned_cols=260 Identities=24% Similarity=0.347 Sum_probs=218.3
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCH-HHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
..+.|..-++||+|+||.||-+.. +|+-||+|.+.+..... .-.....+|.+||..+..++||.+-.+|+..+.+|+
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl 262 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL 262 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence 456788889999999999998865 67789999887665433 233456789999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 580 VTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
||..|+||+|.-+|...+ ..|++.++++++.+|+.||++||+.+ ||+||+||+|||+|+.|+|.|+|+|+|....+.
T Consensus 263 VLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~--iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 263 VLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR--IVYRDLKPENILLDDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc--eeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence 999999999988885543 45999999999999999999999988 999999999999999999999999999876654
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhh--ccccccCCCCCCCHHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVG--FMNQRLEIPKDVDPRWAA 736 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~--~~~~~~~~p~~~~~~l~~ 736 (782)
.. ....+||..|||||++.+..|+...|+|||||+||||+.|+.||.........+.+. .....-+++...++++++
T Consensus 341 ~~-~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~eaks 419 (591)
T KOG0986|consen 341 KP-IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEAKS 419 (591)
T ss_pred Cc-cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccCHHHHH
Confidence 32 234589999999999999999999999999999999999999998665433222221 134456677889999999
Q ss_pred HHHHhhhhCCCCCC-----CHHHHHHHHHHHHHHHhhccc
Q 003978 737 IVESCWHSDPQCRP-----SFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 737 LI~~cL~~dP~~RP-----s~~ell~~L~~L~~~~~~~~~ 771 (782)
|...+|.+||.+|. .++++ -.|+||+..+
T Consensus 420 lc~~LL~Kdp~~RLGcrg~ga~ev------k~HpfFk~ln 453 (591)
T KOG0986|consen 420 LCEGLLTKDPEKRLGCRGEGAQEV------KEHPFFKDLN 453 (591)
T ss_pred HHHHHHccCHHHhccCCCcCcchh------hhCcccccCC
Confidence 99999999999986 45566 3678887643
No 317
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=9.5e-36 Score=325.09 Aligned_cols=262 Identities=26% Similarity=0.354 Sum_probs=216.4
Q ss_pred ceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC-----cee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ-----RLC 578 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~-----~~~ 578 (782)
+|++.+.||.|+||.||+|... +..|+||++..........+.+.+|+.+++.++||||+++++++.... .+|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5899999999999999999974 678999998765433445577889999999999999999999988775 789
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
++|||+. ++|.+++.... .+++..++.++.||+.||.|||+.| |+|+||||.|||++.++.++|+|||++......
T Consensus 81 lv~e~~~-~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH~~g--i~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~ 156 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLHSAN--VIHRDLKPSNILVNSNCDLKICDFGLARGVDPD 156 (330)
T ss_pred EEecchh-hhHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence 9999996 58999987644 7999999999999999999999998 999999999999999999999999999865543
Q ss_pred c---ccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc-----------
Q 003978 659 Y---LTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR----------- 723 (782)
Q Consensus 659 ~---~~~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~----------- 723 (782)
. .......+++.|+|||.+.+. .++.++|||||||++|+|++|..||...+.......+......
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 236 (330)
T cd07834 157 EDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITS 236 (330)
T ss_pred ccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccc
Confidence 2 122344678999999999887 7899999999999999999999999877665443332211100
Q ss_pred ------------------cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcCCCC
Q 003978 724 ------------------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVGDS 777 (782)
Q Consensus 724 ------------------~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~~~~ 777 (782)
....+.++.++.+||.+||..+|.+||++.++ +.|+||+..+....+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~l------l~~~~~~~~~~~~~~~ 302 (330)
T cd07834 237 EKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEA------LAHPYLAQLHDPEDEP 302 (330)
T ss_pred cchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHH------HhCccHHhhcccccCC
Confidence 01123468899999999999999999999999 6789998777664443
No 318
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=9.8e-36 Score=317.13 Aligned_cols=252 Identities=25% Similarity=0.363 Sum_probs=204.1
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
+|++.++||.|++|.||+|.. .+..||||+++..... .....+.+|+.+++.++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE-GTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc-cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence 588999999999999999997 4678999998754322 2234567799999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcC--CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 584 LPRGSLFRLLQRNT--TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 584 ~~ggsL~~~l~~~~--~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
+.+ +|.+++.... ..+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++.........
T Consensus 80 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~ 156 (284)
T cd07836 80 MDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR--VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNT 156 (284)
T ss_pred CCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccc
Confidence 975 8988886543 45899999999999999999999998 999999999999999999999999998755443333
Q ss_pred ccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc------------------c
Q 003978 662 TKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN------------------Q 722 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~------------------~ 722 (782)
.....+++.|++||++.+. .++.++|||||||++|+|++|..||...+..+....+.... .
T Consensus 157 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd07836 157 FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKP 236 (284)
T ss_pred cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcc
Confidence 3344678999999998664 46889999999999999999999998766544333221000 0
Q ss_pred ---------ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 723 ---------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 723 ---------~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
...+.+.++..++++|.+||+.||.+||++.++ +.++||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~------l~~~~f 284 (284)
T cd07836 237 TFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDA------LQHPWF 284 (284)
T ss_pred cccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHH------hcCCCC
Confidence 001123467889999999999999999999999 455665
No 319
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.7e-35 Score=314.74 Aligned_cols=249 Identities=22% Similarity=0.331 Sum_probs=199.7
Q ss_pred eeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecC--CceeEEE
Q 003978 507 LTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSP--QRLCIVT 581 (782)
Q Consensus 507 y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~--~~~~lv~ 581 (782)
|++.++||+|+||.||++.. .+..||+|+++......... ...+|+.++..+. |+||+++++++... +.+++||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~-~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~ 79 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQV-NNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF 79 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhh-hHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence 67899999999999999987 46779999987543332222 3346888888885 99999999999887 8899999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
||+. ++|.+++......+++..++.++.|++.||.|||+.+ ++|+||||+||+++. +.+||+|||++........
T Consensus 80 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~--i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~- 154 (282)
T cd07831 80 ELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNG--IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP- 154 (282)
T ss_pred ecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecccCHHHEEEcC-CCeEEEecccccccccCCC-
Confidence 9996 5888888765567899999999999999999999998 999999999999999 9999999999876543322
Q ss_pred ccCCCCCCcccCccccc-CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc----------------cc
Q 003978 662 TKTGKGTPQWMAPEVLR-NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ----------------RL 724 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~-~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~----------------~~ 724 (782)
.....+++.|+|||++. +..++.++|||||||++|+|++|..||...+.......+..... ..
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (282)
T cd07831 155 YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNY 234 (282)
T ss_pred cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccc
Confidence 12345789999999765 45568899999999999999999999987765543333211000 01
Q ss_pred C-----------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 725 E-----------IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 725 ~-----------~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
. +...++..+.+||.+||.++|++||++.++ ++|+||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~------l~~~~~ 282 (282)
T cd07831 235 NFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQA------LRHPYF 282 (282)
T ss_pred cCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHH------hhCCCC
Confidence 1 123567899999999999999999999999 556665
No 320
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=8.8e-36 Score=312.75 Aligned_cols=250 Identities=26% Similarity=0.435 Sum_probs=210.2
Q ss_pred eccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCCCCH
Q 003978 513 IGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSL 589 (782)
Q Consensus 513 IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ggsL 589 (782)
||.|+||.||++.+. ++.+++|++..... .......+.+|+++++.++||||+++++.+......|++|||+.+++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999984 78899999876543 234567888999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc--------c
Q 003978 590 FRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL--------T 661 (782)
Q Consensus 590 ~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~--------~ 661 (782)
.+++.... .+++..++.++.||+.||.|||+++ ++|+||+|+||+++.++.++|+|||++........ .
T Consensus 81 ~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~--i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 157 (265)
T cd05579 81 ASLLENVG-SLDEDVARIYIAEIVLALEYLHSNG--IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE 157 (265)
T ss_pred HHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcC--eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccc
Confidence 99997654 6899999999999999999999998 99999999999999999999999999875433211 2
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCC--CHHHHHHHH
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDV--DPRWAAIVE 739 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~--~~~l~~LI~ 739 (782)
.....++..|++||.+.+...+.++||||||+++|+|++|..||...........+.. .....+..+ +..+.+||.
T Consensus 158 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~ 235 (265)
T cd05579 158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILN--GKIEWPEDVEVSDEAIDLIS 235 (265)
T ss_pred ccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--CCcCCCccccCCHHHHHHHH
Confidence 2334678899999999888889999999999999999999999988877666655533 233344444 899999999
Q ss_pred HhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 740 SCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 740 ~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
+||..+|.+||++..+.+. +.++||+.+
T Consensus 236 ~~l~~~p~~Rpt~~~~~~~---l~~~~~~~~ 263 (265)
T cd05579 236 KLLVPDPEKRLGAKSIEEI---KNHPFFKGI 263 (265)
T ss_pred HHhcCCHhhcCCCccHHHH---hcCccccCC
Confidence 9999999999999333322 668999765
No 321
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.9e-35 Score=314.82 Aligned_cols=237 Identities=22% Similarity=0.407 Sum_probs=194.5
Q ss_pred eeccCCcEEEEEEEEc--------------------------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcee
Q 003978 512 QIGQGSCGTVYHAVWY--------------------------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVL 565 (782)
Q Consensus 512 ~IG~G~~G~Vy~~~~~--------------------------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv 565 (782)
+||+|+||.||++... ...|++|++.... ......+.+|+.+++.+.||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHHHHHHHHhcCCCCCee
Confidence 6999999999998641 1237888875432 33456788899999999999999
Q ss_pred EEeeeeecCCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC---
Q 003978 566 LFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW--- 642 (782)
Q Consensus 566 ~l~~~~~~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~--- 642 (782)
++++++..+...|+||||+++++|..++......+++..+..++.||+.||+|||+++ |+||||||+|||++..+
T Consensus 80 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 80 FVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKN--LVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred eEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCC--ccCCCCCcccEEEeccCccc
Confidence 9999999999999999999999999999776667899999999999999999999988 99999999999997643
Q ss_pred ----cEEEEecCCCcccccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHH-cCCCCCCCCChHHHHHH
Q 003978 643 ----TVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELA-TEKIPWDNLNSMQVIGA 716 (782)
Q Consensus 643 ----~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~ell-tG~~Pf~~~~~~~~~~~ 716 (782)
.+||+|||++...... ....++..|+|||.+.+ ..++.++|||||||++|||+ +|..||...........
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~ 233 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERF 233 (274)
T ss_pred CccceeeecCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHH
Confidence 4899999987543221 23357888999998875 55789999999999999985 69999987765543322
Q ss_pred hhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003978 717 VGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 759 (782)
Q Consensus 717 i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L 759 (782)
. .....++...++.+.++|.+||..+|++||++.++++.|
T Consensus 234 ~---~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 234 Y---EKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred H---HhccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 2 223344555678999999999999999999999998876
No 322
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.5e-35 Score=316.85 Aligned_cols=254 Identities=27% Similarity=0.414 Sum_probs=202.1
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCceeEEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lv~ 581 (782)
++|+..++||+|+||.||++.+ .++.||||.+...... .....+.+|+.++..+. ||||+++++++..+...+++|
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~ 82 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM 82 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence 4677788999999999999987 4678999998754433 44567788999999996 999999999999999999999
Q ss_pred eecCCCCHHHHHh----hcCCcchHHHHHHHHHHHHHHHHhhhcC-CCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 582 EFLPRGSLFRLLQ----RNTTKLDWRRRILMALDIARGVSYLHHC-NPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 582 E~~~ggsL~~~l~----~~~~~l~~~~~~~i~~qll~aL~~LH~~-~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
||+. ++|.++.. .....+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||++....
T Consensus 83 e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~--i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 83 ELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK--IIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred eccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC--eeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 9995 46655432 1235689999999999999999999974 7 9999999999999999999999999987544
Q ss_pred cccccccCCCCCCcccCcccccCC---CCCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhhccccccC----CCC
Q 003978 657 ETYLTTKTGKGTPQWMAPEVLRNE---PSDEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAVGFMNQRLE----IPK 728 (782)
Q Consensus 657 ~~~~~~~~~~Gt~~y~aPE~l~~~---~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~-~~~~~i~~~~~~~~----~p~ 728 (782)
.... .....|++.|+|||++.+. .++.++|||||||++|+|++|+.||...... .....+.. ...+. .+.
T Consensus 160 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 237 (288)
T cd06616 160 DSIA-KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVK-GDPPILSNSEER 237 (288)
T ss_pred cCCc-cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcC-CCCCcCCCcCCC
Confidence 3322 2234688999999999876 6789999999999999999999999765421 12112111 11111 223
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 729 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 729 ~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
.++.++.+||.+||..||++|||+.++ +.++||+..
T Consensus 238 ~~~~~l~~li~~~l~~~p~~Rpt~~~i------~~~~~~~~~ 273 (288)
T cd06616 238 EFSPSFVNFINLCLIKDESKRPKYKEL------LEHPFIKDY 273 (288)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHH------hcChhhhch
Confidence 478999999999999999999999999 677888653
No 323
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=5.6e-35 Score=308.59 Aligned_cols=249 Identities=30% Similarity=0.513 Sum_probs=210.1
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccC---CCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC--Cce
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQE---YSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP--QRL 577 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~---~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~ 577 (782)
.+|.+.+.||+|+||.||++.. .+..|++|++.... ........+.+|+.+++.++|+||+++++++... ..+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4799999999999999999986 56789999875432 2234567889999999999999999999998654 458
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
+++|||+++++|.+++.... .+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||+++....
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~al~~LH~~~--i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 158 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQGVSYLHSNM--IVHRDIKGANILRDSAGNVKLGDFGASKRIQT 158 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCCCCEEECcccccccccc
Confidence 89999999999999997643 4788899999999999999999998 99999999999999999999999999875432
Q ss_pred cc---ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHH
Q 003978 658 TY---LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 734 (782)
Q Consensus 658 ~~---~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l 734 (782)
.. .......|+..|+|||.+.+..++.++|+|||||++|+|++|..||...........+........+|..+++.+
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 238 (264)
T cd06653 159 ICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDAC 238 (264)
T ss_pred ccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHH
Confidence 11 111234688999999999998889999999999999999999999988766665555544444566788899999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHH
Q 003978 735 AAIVESCWHSDPQCRPSFQELVD 757 (782)
Q Consensus 735 ~~LI~~cL~~dP~~RPs~~ell~ 757 (782)
.++|.+||. +|..||++.+++.
T Consensus 239 ~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 239 RDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred HHHHHHHhc-CcccCccHHHHhc
Confidence 999999999 5799999999854
No 324
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.9e-35 Score=312.65 Aligned_cols=256 Identities=25% Similarity=0.435 Sum_probs=207.8
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec--CCceeEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS--PQRLCIV 580 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~~~~~lv 580 (782)
++|+..+.||.|++|.||++.. .++.+|+|.+..... ......+.+|+++++.++||||+++++++.. .+.+|+|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN-PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc-hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence 3688999999999999999998 467799999875433 3445778899999999999999999998854 3468999
Q ss_pred EeecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 581 TEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~---~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|||+++++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~--i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK--IIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 999999999988753 3456889999999999999999999998 99999999999999999999999999865433
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC-----hHHHHHHhhccccccCCC-----
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN-----SMQVIGAVGFMNQRLEIP----- 727 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~-----~~~~~~~i~~~~~~~~~p----- 727 (782)
... ....++..|++||.+.+..++.++|||||||++|+|++|..||.... ..+....+... ....++
T Consensus 158 ~~~--~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 234 (287)
T cd06621 158 SLA--GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM-PNPELKDEPGN 234 (287)
T ss_pred ccc--ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC-CchhhccCCCC
Confidence 221 23457889999999999889999999999999999999999997652 22333222211 111111
Q ss_pred -CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 728 -KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 728 -~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
..+++.+.+||.+||..+|.+|||+.++ +.|+||+....
T Consensus 235 ~~~~~~~~~~li~~~l~~~p~~Rpt~~ei------l~~~~~~~~~~ 274 (287)
T cd06621 235 GIKWSEEFKDFIKQCLEKDPTRRPTPWDM------LEHPWIKAQMK 274 (287)
T ss_pred CCchHHHHHHHHHHHcCCCcccCCCHHHH------HhCcccccccc
Confidence 2356789999999999999999999999 67788866544
No 325
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=4.8e-35 Score=318.32 Aligned_cols=248 Identities=31% Similarity=0.459 Sum_probs=209.0
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
.+.|...+.||+|+||.||++.. .+..+|+|++..... ..+....+..|+++++.++||||+++++++..+...|+|
T Consensus 24 ~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 103 (317)
T cd06635 24 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLV 103 (317)
T ss_pred hhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEE
Confidence 34588899999999999999987 467899999875433 345566788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 660 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 660 (782)
|||+. |+|.+++.....++++..+..++.||+.||.|||+++ |+|+||+|+||+++.++.++|+|||++.....
T Consensus 104 ~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~--- 177 (317)
T cd06635 104 MEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN--MIHRDIKAGNILLTEPGQVKLADFGSASIASP--- 177 (317)
T ss_pred EeCCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcccEEECCCCCEEEecCCCccccCC---
Confidence 99996 4888888766667899999999999999999999998 99999999999999999999999998864432
Q ss_pred cccCCCCCCcccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHH
Q 003978 661 TTKTGKGTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 737 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~---~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~L 737 (782)
.....|++.|+|||.+. +..++.++|||||||++|+|++|..||...........+.........+..+++.+++|
T Consensus 178 -~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 256 (317)
T cd06635 178 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNF 256 (317)
T ss_pred -cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHH
Confidence 22446889999999974 45678899999999999999999999988766655555543333333445688999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHH
Q 003978 738 VESCWHSDPQCRPSFQELVDK 758 (782)
Q Consensus 738 I~~cL~~dP~~RPs~~ell~~ 758 (782)
|.+||..+|.+||++.+++++
T Consensus 257 i~~~l~~~p~~Rpt~~~il~~ 277 (317)
T cd06635 257 VDSCLQKIPQDRPTSEELLKH 277 (317)
T ss_pred HHHHccCCcccCcCHHHHHhC
Confidence 999999999999999999654
No 326
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=4e-35 Score=306.79 Aligned_cols=247 Identities=28% Similarity=0.482 Sum_probs=213.7
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
+|++.++||+|+||.||++.. .+..+++|.+............+.+|+++++.++|+||+++++++......|+||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 588999999999999999987 466799999987655555567788899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhc---CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc
Q 003978 584 LPRGSLFRLLQRN---TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 660 (782)
Q Consensus 584 ~~ggsL~~~l~~~---~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 660 (782)
+++++|.+++... ...+++..++.++.|++.||.|||+.+ ++|+||+|.||+++.++.+||+|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~--i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK--ILHRDLKSANILLVANDLVKIGDLGISKVLKKN-- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCcceEEEecCCcEEEeeccchhhhccC--
Confidence 9999999998652 345889999999999999999999998 999999999999999999999999998766544
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHH
Q 003978 661 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVES 740 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~ 740 (782)
......+++.|++||.+.+..++.++|+||||+++|+|++|+.||...+.......+. ......++..++.+++++|.+
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~ 235 (256)
T cd08530 157 MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQ-RGKYPPIPPIYSQDLQNFIRS 235 (256)
T ss_pred CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh-cCCCCCCchhhCHHHHHHHHH
Confidence 2234568899999999999989999999999999999999999998887665544442 233345566789999999999
Q ss_pred hhhhCCCCCCCHHHHHH
Q 003978 741 CWHSDPQCRPSFQELVD 757 (782)
Q Consensus 741 cL~~dP~~RPs~~ell~ 757 (782)
||..+|++||++.++++
T Consensus 236 ~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 236 MLQVKPKLRPNCDKILA 252 (256)
T ss_pred HcCCCcccCCCHHHHhc
Confidence 99999999999999964
No 327
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=3.9e-35 Score=308.64 Aligned_cols=250 Identities=26% Similarity=0.366 Sum_probs=203.5
Q ss_pred eeeccCCcEEEEEEEE--cCCeEEEEEEeccCCC-HHHHHHHHHHHHHH-HhCCCCceeEEeeeeecCCceeEEEeecCC
Q 003978 511 EQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYS-DEVIHSFRQEVSLM-KRLRHPNVLLFMGAVTSPQRLCIVTEFLPR 586 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~-~~~~~~~~~Ei~il-~~l~HpnIv~l~~~~~~~~~~~lv~E~~~g 586 (782)
+.||.|+||.||+|.. .++.||||++++.... ......+..|..++ ...+|+||+++++++...+.+|+||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5799999999999987 5678999998754432 22233444555544 445899999999999999999999999999
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003978 587 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 666 (782)
Q Consensus 587 gsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 666 (782)
++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..... .....
T Consensus 82 ~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----~~~~~ 154 (260)
T cd05611 82 GDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLHQRG--IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----NKKFV 154 (260)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCCCcEEEeecccceeccc----cccCC
Confidence 9999999764 36899999999999999999999998 99999999999999999999999998875432 22446
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc--ccCCCCCCCHHHHHHHHHhhhh
Q 003978 667 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ--RLEIPKDVDPRWAAIVESCWHS 744 (782)
Q Consensus 667 Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~--~~~~p~~~~~~l~~LI~~cL~~ 744 (782)
|++.|++||.+.+..++.++||||||+++|+|++|..||...+.......+..... .......+++.+.++|.+||..
T Consensus 155 ~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 234 (260)
T cd05611 155 GTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCM 234 (260)
T ss_pred CCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccC
Confidence 88999999999988889999999999999999999999988777665555432221 2233446899999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 745 DPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 745 dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
||++||++..+.+. +.|+||+.+
T Consensus 235 ~p~~R~~~~~~~~~---l~~~~~~~~ 257 (260)
T cd05611 235 DPAKRLGANGYQEI---KSHPFFKSI 257 (260)
T ss_pred CHHHccCCCcHHHH---HcChHhhcC
Confidence 99999966544332 678999764
No 328
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-37 Score=330.22 Aligned_cols=256 Identities=21% Similarity=0.359 Sum_probs=230.9
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEcCCe--EEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGSD--VAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~--vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
....+++++..||-|+||.|-++..+++. +|+|++++... .....+-+..|-.||..++.|+||++|-.|.+..++|
T Consensus 417 v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvY 496 (732)
T KOG0614|consen 417 VKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVY 496 (732)
T ss_pred cchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhh
Confidence 34567888899999999999999988776 89999987654 4455566788999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
++||-|-||.|..+|...+ .|+...+.+++.-+++|++|||++| ||+|||||+|+|++.+|-+||.|||+|+.....
T Consensus 497 mLmEaClGGElWTiLrdRg-~Fdd~tarF~~acv~EAfeYLH~k~--iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 497 MLMEACLGGELWTILRDRG-SFDDYTARFYVACVLEAFEYLHRKG--IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred hhHHhhcCchhhhhhhhcC-CcccchhhhhHHHHHHHHHHHHhcC--ceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 9999999999999998754 6999999999999999999999999 999999999999999999999999999987765
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 738 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI 738 (782)
.. +-+++|||.|.|||++.+..++.++|.||||+++||||+|.+||.+.+++..+..|.+....+.+|..++....+||
T Consensus 574 ~K-TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Li 652 (732)
T KOG0614|consen 574 RK-TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDLI 652 (732)
T ss_pred Cc-eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHHH
Confidence 44 44789999999999999999999999999999999999999999999999999999888888999999999999999
Q ss_pred HHhhhhCCCCCCC-----HHHHHHHHHHHHHHHh
Q 003978 739 ESCWHSDPQCRPS-----FQELVDKLRDLQRQYF 767 (782)
Q Consensus 739 ~~cL~~dP~~RPs-----~~ell~~L~~L~~~~~ 767 (782)
+++...+|.+|.. +.+| -+|.||
T Consensus 653 k~LCr~~P~ERLG~~~~gI~DI------kkH~Wf 680 (732)
T KOG0614|consen 653 KKLCRDNPTERLGYQKGGINDI------KKHRWF 680 (732)
T ss_pred HHHHhcCcHhhhccccCChHHH------Hhhhhh
Confidence 9999999999975 4555 256787
No 329
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.7e-35 Score=314.55 Aligned_cols=247 Identities=24% Similarity=0.346 Sum_probs=206.2
Q ss_pred eeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeec
Q 003978 507 LTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFL 584 (782)
Q Consensus 507 y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~ 584 (782)
|++.+.||.|++|.||++.. .+..+++|.+............+.+|+.+++.++|+||+++++++..+..+++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 56788999999999999987 4777999998766555445577888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccC
Q 003978 585 PRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKT 664 (782)
Q Consensus 585 ~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 664 (782)
++ +|.+++......+++..++.++.||+.||.|||+++ |+|+||||+||+++.++.++|+|||++............
T Consensus 81 ~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 157 (283)
T cd05118 81 DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHG--ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTH 157 (283)
T ss_pred CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCC--eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccC
Confidence 65 898888776567899999999999999999999998 999999999999999999999999998766544322233
Q ss_pred CCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc--------------------
Q 003978 665 GKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR-------------------- 723 (782)
Q Consensus 665 ~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~-------------------- 723 (782)
..++..|+|||.+.+. .++.++|||||||++|+|++|+.||...+..+....+......
T Consensus 158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05118 158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSF 237 (283)
T ss_pred ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhh
Confidence 4678899999999876 6889999999999999999999999877655443332110000
Q ss_pred --------cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHH
Q 003978 724 --------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELV 756 (782)
Q Consensus 724 --------~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell 756 (782)
..+.+.++.++.+||.+||..||.+||++.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll 278 (283)
T cd05118 238 PKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQAL 278 (283)
T ss_pred ccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHh
Confidence 012234688999999999999999999999994
No 330
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-36 Score=315.87 Aligned_cols=244 Identities=28% Similarity=0.444 Sum_probs=216.8
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEcCCe--EEEEEEeccCC-CHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCce
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGSD--VAVKVFSRQEY-SDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~--vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 577 (782)
+...+|.++.+||+|+||+|.++..+|+. ||||++++... +++-.+--+.|-++|... +-|.+++++..|+..+.+
T Consensus 346 i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRL 425 (683)
T KOG0696|consen 346 IKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRL 425 (683)
T ss_pred eeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhe
Confidence 44568899999999999999999987764 99999988754 333334445677787766 468999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|+||||+.||+|--+|++- .++.+..+.+++.+|+-||-|||++| ||+||||.+|||++.+|+|||+|||+++...-
T Consensus 426 yFVMEyvnGGDLMyhiQQ~-GkFKEp~AvFYAaEiaigLFFLh~kg--IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 426 YFVMEYVNGGDLMYHIQQV-GKFKEPVAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKENIF 502 (683)
T ss_pred eeEEEEecCchhhhHHHHh-cccCCchhhhhhHHHHHHhhhhhcCC--eeeeeccccceEeccCCceEeeeccccccccc
Confidence 9999999999998888764 46888999999999999999999999 99999999999999999999999999987666
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHH
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 737 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~L 737 (782)
...++.+.+|||.|+|||++..++|+..+|+||+|++||||+.|.+||.+.+..++...| +...-..|+.++.++..+
T Consensus 503 ~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI--~ehnvsyPKslSkEAv~i 580 (683)
T KOG0696|consen 503 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAI--MEHNVSYPKSLSKEAVAI 580 (683)
T ss_pred CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH--HHccCcCcccccHHHHHH
Confidence 677788999999999999999999999999999999999999999999999999998888 445567889999999999
Q ss_pred HHHhhhhCCCCCC
Q 003978 738 VESCWHSDPQCRP 750 (782)
Q Consensus 738 I~~cL~~dP~~RP 750 (782)
++..|.+.|.+|.
T Consensus 581 ckg~ltK~P~kRL 593 (683)
T KOG0696|consen 581 CKGLLTKHPGKRL 593 (683)
T ss_pred HHHHhhcCCcccc
Confidence 9999999999995
No 331
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.8e-35 Score=319.98 Aligned_cols=253 Identities=25% Similarity=0.372 Sum_probs=199.1
Q ss_pred ceeEeeeeccCCcEEEEEEEE----cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC--Ccee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW----YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP--QRLC 578 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~----~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~~ 578 (782)
+|.+.++||+|+||.||+|.. .+..||||++..... .......+.+|+.+++.++||||+++++++... ..+|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 488999999999999999997 457899999876431 223345677899999999999999999999887 7899
Q ss_pred EEEeecCCCCHHHHHhhc----CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC----CCcEEEEecC
Q 003978 579 IVTEFLPRGSLFRLLQRN----TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK----HWTVKVGDFG 650 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~----~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~----~~~vkL~DFG 650 (782)
+||||+++ +|.+++... ...+++..++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg 157 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW--VLHRDLKPANILVMGEGPERGVVKIGDLG 157 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC--EeeCCCCHHHEEEcCCCCccceEEECCCc
Confidence 99999964 777776432 236889999999999999999999998 999999999999999 8999999999
Q ss_pred CCcccccccc---cccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHH---------HHHHh
Q 003978 651 LSRLKHETYL---TTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQ---------VIGAV 717 (782)
Q Consensus 651 la~~~~~~~~---~~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~---------~~~~i 717 (782)
++........ ......+++.|+|||++.+. .++.++|||||||++|+|++|..||....... .+..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (316)
T cd07842 158 LARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERI 237 (316)
T ss_pred cccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHH
Confidence 9876543322 22334678999999988764 57889999999999999999999997554321 00000
Q ss_pred -hc-----------------------cccccCCC-----------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 718 -GF-----------------------MNQRLEIP-----------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 718 -~~-----------------------~~~~~~~p-----------~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
.. .......+ ...+.++.++|.+||..||++|||+.++ +
T Consensus 238 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~ei------l 311 (316)
T cd07842 238 FEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEA------L 311 (316)
T ss_pred HHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHH------h
Confidence 00 00000111 1567789999999999999999999999 5
Q ss_pred HHHHh
Q 003978 763 QRQYF 767 (782)
Q Consensus 763 ~~~~~ 767 (782)
.|+||
T Consensus 312 ~~~~f 316 (316)
T cd07842 312 EHPYF 316 (316)
T ss_pred cCCCC
Confidence 56665
No 332
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=9e-35 Score=315.73 Aligned_cols=254 Identities=31% Similarity=0.467 Sum_probs=211.1
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
+.|...++||+|+||.||+|.. .+..|+||++..... .......+.+|+.+++.++||||+++++++......|+||
T Consensus 21 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 100 (313)
T cd06633 21 EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVM 100 (313)
T ss_pred HHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEE
Confidence 3477778899999999999986 567899999875543 3345567888999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
||+. ++|.+++.....++++..++.++.||+.+|.|||+++ |+|+||||+||+++.++.+||+|||++.....
T Consensus 101 e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~g--i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~---- 173 (313)
T cd06633 101 EYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN--MIHRDIKAGNILLTEPGQVKLADFGSASKSSP---- 173 (313)
T ss_pred ecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCChhhEEECCCCCEEEeecCCCcccCC----
Confidence 9995 5888888766667899999999999999999999998 99999999999999999999999998864322
Q ss_pred ccCCCCCCcccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHH
Q 003978 662 TKTGKGTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 738 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~---~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI 738 (782)
.....|+..|+|||++. +..++.++|||||||++|+|++|..||...+.......+............++..+++||
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 253 (313)
T cd06633 174 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFV 253 (313)
T ss_pred CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHH
Confidence 22456889999999984 455788999999999999999999999887766555554333222233345788999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 739 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 739 ~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
.+||+.+|.+||++.++ +.++||...+
T Consensus 254 ~~~l~~~P~~Rp~~~~~------l~~~~~~~~~ 280 (313)
T cd06633 254 DYCLQKIPQERPASAEL------LRHDFVRRDR 280 (313)
T ss_pred HHHccCChhhCcCHHHH------hcCcccCCCc
Confidence 99999999999999999 5667776543
No 333
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=2.7e-35 Score=316.88 Aligned_cols=253 Identities=25% Similarity=0.326 Sum_probs=204.8
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC----
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ---- 575 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~---- 575 (782)
...++|++.+.||+|+||.||+|.. .++.||||+++...........+.+|+++++.++||||+++++++....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 4457899999999999999999998 4678999998765433333456778999999999999999999987654
Q ss_pred ------ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEec
Q 003978 576 ------RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDF 649 (782)
Q Consensus 576 ------~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DF 649 (782)
.+|++|||+++ +|...+......+++..++.++.||+.||+|||+.+ |+|+||||+||++++++.+||+||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--i~H~dl~p~nili~~~~~~kl~df 160 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKN--FLHRDIKCSNILLNNKGQIKLADF 160 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCcEEeCcc
Confidence 78999999965 888888766567899999999999999999999998 999999999999999999999999
Q ss_pred CCCcccccccc-cccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc---
Q 003978 650 GLSRLKHETYL-TTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL--- 724 (782)
Q Consensus 650 Gla~~~~~~~~-~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~--- 724 (782)
|++........ ......++..|++||.+.+ ..++.++|||||||++|+|++|+.||...+....+..+.......
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (302)
T cd07864 161 GLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPA 240 (302)
T ss_pred cccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence 99876543321 1122356788999998865 446889999999999999999999998776655443332211000
Q ss_pred -------------------------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003978 725 -------------------------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVD 757 (782)
Q Consensus 725 -------------------------~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~ 757 (782)
.....++..+.+||.+||..||.+||++.+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 241 VWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred hcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 012346899999999999999999999999943
No 334
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=6.1e-35 Score=311.41 Aligned_cols=249 Identities=24% Similarity=0.374 Sum_probs=199.3
Q ss_pred eeccCCcEEEEEEEE--cCCeEEEEEEeccCCCH-HHHHHHHHH---HHHHHhCCCCceeEEeeeeecCCceeEEEeecC
Q 003978 512 QIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSD-EVIHSFRQE---VSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLP 585 (782)
Q Consensus 512 ~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~-~~~~~~~~E---i~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ 585 (782)
.||+|+||.||++.. .++.||||++.+..... .....+..| +++++...||||+.+++++..+..+|+||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999987 46789999987654322 111122233 344555679999999999999999999999999
Q ss_pred CCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCC
Q 003978 586 RGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTG 665 (782)
Q Consensus 586 ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 665 (782)
|++|..++... ..+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++...... .....
T Consensus 81 g~~L~~~l~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~--~~~~~ 155 (278)
T cd05606 81 GGDLHYHLSQH-GVFSEAEMRFYAAEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KPHAS 155 (278)
T ss_pred CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--EEcCCCCHHHEEECCCCCEEEccCcCccccCcc--CCcCc
Confidence 99999998754 46899999999999999999999998 999999999999999999999999998754332 22245
Q ss_pred CCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHH-HhhccccccCCCCCCCHHHHHHHHHhhh
Q 003978 666 KGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIG-AVGFMNQRLEIPKDVDPRWAAIVESCWH 743 (782)
Q Consensus 666 ~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~-~i~~~~~~~~~p~~~~~~l~~LI~~cL~ 743 (782)
.|+..|+|||++.+ ..++.++||||+||++|+|++|..||.......... ..........++..++.++.++|.+||.
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~ 235 (278)
T cd05606 156 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQ 235 (278)
T ss_pred CCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHHHhh
Confidence 78999999999875 467899999999999999999999997663221111 1111233456777789999999999999
Q ss_pred hCCCCCC-----CHHHHHHHHHHHHHHHhhccc
Q 003978 744 SDPQCRP-----SFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 744 ~dP~~RP-----s~~ell~~L~~L~~~~~~~~~ 771 (782)
.+|.+|| ++.++ +.++||+...
T Consensus 236 ~~p~~R~~~~~~~~~~l------l~~~~~~~~~ 262 (278)
T cd05606 236 RDVNRRLGCLGRGAQEV------KEHPFFRSLD 262 (278)
T ss_pred cCHHhccCCCCCCHHHH------HhCccccCCC
Confidence 9999999 99999 4678886543
No 335
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=7.8e-35 Score=320.49 Aligned_cols=256 Identities=26% Similarity=0.375 Sum_probs=209.5
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC-----
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ----- 575 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----- 575 (782)
..++|++.+.||+|+||.||++.. .+..||||++............+.+|+.+|+.++||||+++++++..+.
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 457899999999999999999986 4678999998655444445567889999999999999999999987654
Q ss_pred -ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 576 -RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 576 -~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
.+++||||+ +++|.+++.. ..+++..++.++.||+.||.|||+.+ |+|+||||+||+++.++.++|+|||++..
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~~g--i~H~dlkp~Nill~~~~~~kl~dfg~~~~ 167 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHAAG--IIHRDLKPGNLAVNEDCELKILDFGLARQ 167 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEeecccccc
Confidence 358999999 7799988864 35899999999999999999999998 99999999999999999999999999875
Q ss_pred cccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-----------
Q 003978 655 KHETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ----------- 722 (782)
Q Consensus 655 ~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~----------- 722 (782)
.... .....+++.|++||.+.+ ..++.++|+|||||++|+|++|..||...+.......+.....
T Consensus 168 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (343)
T cd07880 168 TDSE---MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQ 244 (343)
T ss_pred cccC---ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhc
Confidence 5432 223467899999999876 4578899999999999999999999987665433322211000
Q ss_pred ------------------ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 723 ------------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 723 ------------------~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
...+...+++.+.++|.+||..||.+|||+.++ +.|+||+..+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~------l~~~~~~~~~~ 306 (343)
T cd07880 245 SEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEA------LAHPYFEEFHD 306 (343)
T ss_pred chhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHH------hcCccHhhhcC
Confidence 001224678899999999999999999999999 56899977644
No 336
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=7e-35 Score=313.50 Aligned_cols=261 Identities=27% Similarity=0.457 Sum_probs=207.8
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCC
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~ 575 (782)
.+....++|++.+.||.|+||.||++.+. +..||||+++...... ....+..|+.++... .||||+++++++....
T Consensus 9 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~ 87 (296)
T cd06618 9 KYPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKE-ENKRILMDLDVVLKSHDCPYIVKCYGYFITDS 87 (296)
T ss_pred eccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChH-HHHHHHHHHHHHHhccCCCchHhhheeeecCC
Confidence 34456688999999999999999999986 7889999997654332 345556677766666 5999999999999999
Q ss_pred ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhc-CCCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~-~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
..|++|||+ +++|.+++......+++..+..++.|++.||+|||+ ++ |+|+||+|+||+++.++.+||+|||++..
T Consensus 88 ~~~~v~e~~-~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~--i~H~dl~p~nill~~~~~~kL~dfg~~~~ 164 (296)
T cd06618 88 DVFICMELM-STCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHG--VIHRDVKPSNILLDASGNVKLCDFGISGR 164 (296)
T ss_pred eEEEEeecc-CcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCC--EecCCCcHHHEEEcCCCCEEECccccchh
Confidence 999999999 458888876655678999999999999999999997 57 99999999999999999999999999875
Q ss_pred cccccccccCCCCCCcccCcccccCCC----CCchhHHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHhhccccccCCC--
Q 003978 655 KHETYLTTKTGKGTPQWMAPEVLRNEP----SDEKSDVYSFGVILWELATEKIPWDNLNS-MQVIGAVGFMNQRLEIP-- 727 (782)
Q Consensus 655 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~----~s~~sDIwSLG~ll~elltG~~Pf~~~~~-~~~~~~i~~~~~~~~~p-- 727 (782)
....... ....+++.|+|||.+.+.. ++.++|||||||++|+|++|+.||..... .+.+..+... ....++
T Consensus 165 ~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~ 242 (296)
T cd06618 165 LVDSKAK-TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQE-EPPSLPPN 242 (296)
T ss_pred ccCCCcc-cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcC-CCCCCCCC
Confidence 5433222 2335788999999987654 68899999999999999999999976433 2333232211 112222
Q ss_pred CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 728 KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 728 ~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
..++.++.+||.+||..||.+||++.++ +.++||+-.+
T Consensus 243 ~~~~~~l~~li~~~l~~~p~~Rp~~~~i------l~~~~~~~~~ 280 (296)
T cd06618 243 EGFSPDFCSFVDLCLTKDHRKRPKYREL------LQHPFIRRYE 280 (296)
T ss_pred CCCCHHHHHHHHHHccCChhhCCCHHHH------hcChhhhccc
Confidence 3478999999999999999999999999 5667776543
No 337
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.1e-34 Score=307.46 Aligned_cols=244 Identities=27% Similarity=0.456 Sum_probs=193.0
Q ss_pred eeccCCcEEEEEEEEc-CC---eEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCCC
Q 003978 512 QIGQGSCGTVYHAVWY-GS---DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRG 587 (782)
Q Consensus 512 ~IG~G~~G~Vy~~~~~-~~---~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg 587 (782)
.||+|+||.||++... +. .+++|.+.... .......+.+|+.+++.++||||+++++.+......|+||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA-SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC-ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 6999999999999753 32 24556554432 2334567889999999999999999999999999999999999999
Q ss_pred CHHHHHhhcC---CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc--cccc
Q 003978 588 SLFRLLQRNT---TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET--YLTT 662 (782)
Q Consensus 588 sL~~~l~~~~---~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~--~~~~ 662 (782)
+|.+++.... ..+++..++.++.||+.||+|||+.+ |+|+||||+|||++.++.++|+|||++...... ....
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN--FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC--eeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 9999997532 33566778889999999999999988 999999999999999999999999997642221 1122
Q ss_pred cCCCCCCcccCcccccC-------CCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccc----cccCCCCCC
Q 003978 663 KTGKGTPQWMAPEVLRN-------EPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMN----QRLEIPKDV 730 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~-------~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~----~~~~~p~~~ 730 (782)
....++..|+|||++.. ..++.++|||||||++|+|++ |..||........+..+.... ..+.++..+
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPY 238 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCC
Confidence 34567899999999753 234678999999999999997 578998777665555432211 123444568
Q ss_pred CHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003978 731 DPRWAAIVESCWHSDPQCRPSFQELVDKL 759 (782)
Q Consensus 731 ~~~l~~LI~~cL~~dP~~RPs~~ell~~L 759 (782)
++.+.+++..|| .+|++||++.++++.|
T Consensus 239 ~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 239 SERWYEVLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred cHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence 899999999999 6799999999998776
No 338
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=4.2e-35 Score=320.36 Aligned_cols=255 Identities=26% Similarity=0.424 Sum_probs=203.1
Q ss_pred eeeccC--CcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCC
Q 003978 511 EQIGQG--SCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPR 586 (782)
Q Consensus 511 ~~IG~G--~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~g 586 (782)
..||.| +||+||++.+ .++.||||++.......+..+.+.+|+.+++.++||||+++++++.....+|+||||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 456666 9999999987 678899999987665666678899999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc-----
Q 003978 587 GSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL----- 660 (782)
Q Consensus 587 gsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~----- 660 (782)
++|.+++.... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.++++||+.+........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG--YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVV 161 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccc
Confidence 99999987642 35888999999999999999999988 99999999999999999999999986432211110
Q ss_pred --cccCCCCCCcccCcccccCC--CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc--------------
Q 003978 661 --TTKTGKGTPQWMAPEVLRNE--PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-------------- 722 (782)
Q Consensus 661 --~~~~~~Gt~~y~aPE~l~~~--~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~-------------- 722 (782)
......++..|++||++.+. .++.++|||||||++|+|++|..||.................
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (328)
T cd08226 162 YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEES 241 (328)
T ss_pred ccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhh
Confidence 01112356779999999764 467899999999999999999999987655433322110000
Q ss_pred -------------------------------ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 723 -------------------------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 723 -------------------------------~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
....+..+++.+.+||.+||..||++|||+.++ ++|+||+.+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~------l~~~~~~~~~ 315 (328)
T cd08226 242 RMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSL------LSHAFFKQVK 315 (328)
T ss_pred hhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHH------hhCHHHHHHH
Confidence 001123356789999999999999999999999 6788887665
Q ss_pred Cc
Q 003978 772 ST 773 (782)
Q Consensus 772 ~~ 773 (782)
..
T Consensus 316 ~~ 317 (328)
T cd08226 316 EQ 317 (328)
T ss_pred Hh
Confidence 44
No 339
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-36 Score=336.77 Aligned_cols=264 Identities=33% Similarity=0.552 Sum_probs=236.8
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEc--C---CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeee
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWY--G---SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT 572 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~---~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~ 572 (782)
+..|+.....+|.++||.|-||.||+|+.+ + ..||||.++. .+.++....|..|+.||-+++||||++|.|+..
T Consensus 622 FakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~-GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVT 700 (996)
T KOG0196|consen 622 FAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKA-GYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVT 700 (996)
T ss_pred hhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeecc-CccHHHHhhhhhhhhhcccCCCCcEEEEEEEEe
Confidence 344666778999999999999999999873 3 3499999864 456777889999999999999999999999999
Q ss_pred cCCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCC
Q 003978 573 SPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLS 652 (782)
Q Consensus 573 ~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla 652 (782)
....++||.|||+.|+|..+|+.+...|...+..-+++.|+.||.||-+.+ +|||||-..||||+.+...|++|||++
T Consensus 701 ks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~--YVHRDLAARNILVNsnLvCKVsDFGLS 778 (996)
T KOG0196|consen 701 KSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMN--YVHRDLAARNILVNSNLVCKVSDFGLS 778 (996)
T ss_pred cCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcC--chhhhhhhhheeeccceEEEeccccce
Confidence 999999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred cccccccc---cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCC
Q 003978 653 RLKHETYL---TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPK 728 (782)
Q Consensus 653 ~~~~~~~~---~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~ 728 (782)
+...+... ++....-..+|.|||.+...+++.++||||+||+|||.++ |..||..+...+++..+. ...+++.|.
T Consensus 779 Rvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe-~gyRLPpPm 857 (996)
T KOG0196|consen 779 RVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE-QGYRLPPPM 857 (996)
T ss_pred eecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHH-hccCCCCCC
Confidence 97755432 2223344579999999999999999999999999999776 999999999999998885 566778888
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003978 729 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 765 (782)
Q Consensus 729 ~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~ 765 (782)
.+|..|.+|+..||++|-.+||.+.+|+..|++|..+
T Consensus 858 DCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 858 DCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred CCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999764
No 340
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=5.3e-35 Score=310.17 Aligned_cols=244 Identities=21% Similarity=0.355 Sum_probs=198.7
Q ss_pred cceeEeeee--ccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCceeE
Q 003978 505 EDLTIGEQI--GQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 505 ~~y~i~~~I--G~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~l 579 (782)
++|++.+.+ |.|+||.||++.. .+..+|+|++........ |+.....+ +||||+++++.+..++.+|+
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-------e~~~~~~~~~h~~iv~~~~~~~~~~~~~i 86 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-------EPMVHQLMKDNPNFIKLYYSVTTLKGHVL 86 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-------hHHHHHHhhcCCCEEEEEEEEecCCeeEE
Confidence 466666666 9999999999987 467799999876543221 22222222 69999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC-cEEEEecCCCcccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW-TVKVGDFGLSRLKHET 658 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~-~vkL~DFGla~~~~~~ 658 (782)
||||+++++|.+++.... .+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++ .++|+|||++......
T Consensus 87 v~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~ 163 (267)
T PHA03390 87 IMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKHN--IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP 163 (267)
T ss_pred EEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEEeCCCCeEEEecCccceecCCC
Confidence 999999999999997654 7899999999999999999999998 99999999999999988 9999999998755432
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHH--HHHhhccccccCCCCCCCHHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQV--IGAVGFMNQRLEIPKDVDPRWAA 736 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~--~~~i~~~~~~~~~p~~~~~~l~~ 736 (782)
....|+..|+|||++.+..++.++|||||||++|+|++|..||........ .............++.+++.+++
T Consensus 164 ----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (267)
T PHA03390 164 ----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNAND 239 (267)
T ss_pred ----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHH
Confidence 234689999999999998899999999999999999999999975543221 11111123344555679999999
Q ss_pred HHHHhhhhCCCCCCC-HHHHHHHHHHHHHHHhh
Q 003978 737 IVESCWHSDPQCRPS-FQELVDKLRDLQRQYFQ 768 (782)
Q Consensus 737 LI~~cL~~dP~~RPs-~~ell~~L~~L~~~~~~ 768 (782)
||.+||+.||.+||+ ++++ |+|+||+
T Consensus 240 li~~~l~~~p~~R~~~~~~~------l~h~~~~ 266 (267)
T PHA03390 240 FVQSMLKYNINYRLTNYNEI------IKHPFLK 266 (267)
T ss_pred HHHHHhccChhhCCchHHHH------hcCCccc
Confidence 999999999999995 6999 6788886
No 341
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-35 Score=322.54 Aligned_cols=261 Identities=34% Similarity=0.590 Sum_probs=229.5
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEcC--CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYG--SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~--~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
-.||+...++.+..+||-|.||.||.|.|+. -.||||.++... ..+++|..|..+|+.++|||+|+++++|..+-
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt---MeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep 336 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP 336 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc---hhHHHHHHHHHHHHhhcCccHHHHhhhhccCC
Confidence 4677777889999999999999999999864 458999886543 34578999999999999999999999999999
Q ss_pred ceeEEEeecCCCCHHHHHhhcCC-cchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNTT-KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~~-~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
.+|||.|||..|+|.+||..+.. .++.-..+.++.||..||+||..++ +|||||-..|+||..+..||++|||++++
T Consensus 337 PFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn--FIHRDLAARNCLVgEnhiVKvADFGLsRl 414 (1157)
T KOG4278|consen 337 PFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHIVKVADFGLSRL 414 (1157)
T ss_pred CeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh--hhhhhhhhhhccccccceEEeeccchhhh
Confidence 99999999999999999987543 3666677889999999999999988 99999999999999999999999999998
Q ss_pred cccccccc-cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCH
Q 003978 655 KHETYLTT-KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDP 732 (782)
Q Consensus 655 ~~~~~~~~-~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~ 732 (782)
+.....+. ....-...|.|||.+....++.|+|||+||++|||+.| |-.||.+.+..+++..+. ...+++.|..||+
T Consensus 415 MtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLE-kgyRM~~PeGCPp 493 (1157)
T KOG4278|consen 415 MTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLE-KGYRMDGPEGCPP 493 (1157)
T ss_pred hcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHh-ccccccCCCCCCH
Confidence 76543332 22234668999999999999999999999999999998 999999999999987775 5678899999999
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 733 RWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 733 ~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
..++|+..||+.+|.+||++.++-+.|+.+-+
T Consensus 494 kVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 494 KVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred HHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 99999999999999999999999999887743
No 342
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=3e-35 Score=322.32 Aligned_cols=259 Identities=22% Similarity=0.359 Sum_probs=207.8
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec----CCcee
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS----PQRLC 578 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~----~~~~~ 578 (782)
.+|++.+.||+|+||.||++.. .+..||+|++............+.+|+.+|+.++||||+++++++.. ...+|
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 6899999999999999999986 47789999987654333445677789999999999999999998753 34689
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
+||||+. ++|.+++... ..+++..++.++.||+.||.|||+++ |+|+||||+||+++.++.+||+|||++......
T Consensus 85 lv~e~~~-~~l~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 160 (334)
T cd07855 85 VVMDLME-SDLHHIIHSD-QPLTEEHIRYFLYQLLRGLKYIHSAN--VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSS 160 (334)
T ss_pred EEEehhh-hhHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCcEEecccccceeeccc
Confidence 9999995 6899998654 35899999999999999999999998 999999999999999999999999998754332
Q ss_pred ccc----ccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-------------
Q 003978 659 YLT----TKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM------------- 720 (782)
Q Consensus 659 ~~~----~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~------------- 720 (782)
... .....|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||...+.......+...
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 240 (334)
T cd07855 161 PTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIG 240 (334)
T ss_pred CcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhc
Confidence 211 123468899999999865 45788999999999999999999999776544322221110
Q ss_pred -----------ccccC-----CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 721 -----------NQRLE-----IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 721 -----------~~~~~-----~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
..... +.+..+.++.+||.+||+.+|.+||++.++ +.|+||+.....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~------l~~~~~~~~~~~ 303 (334)
T cd07855 241 SDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQA------LQHPFLAQYHDP 303 (334)
T ss_pred hhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHH------HhChhhhhccCC
Confidence 00111 124568899999999999999999999999 678999654443
No 343
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=4.3e-35 Score=316.08 Aligned_cols=255 Identities=24% Similarity=0.372 Sum_probs=202.0
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC------
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ------ 575 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------ 575 (782)
.++|++.++||.|+||.||++.+ .++.++||++............+.+|+++++.++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 47899999999999999999987 4677999998765433333345678999999999999999999875433
Q ss_pred --ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCc
Q 003978 576 --RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 653 (782)
Q Consensus 576 --~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~ 653 (782)
.+|+||||+. ++|...+......+++..+..++.||+.||.|||+++ |+|+||||+||++++++.++|+|||++.
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~--i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENH--ILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEECcCccch
Confidence 4699999995 4788887765667999999999999999999999998 9999999999999999999999999987
Q ss_pred cccccccc-----------ccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc
Q 003978 654 LKHETYLT-----------TKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN 721 (782)
Q Consensus 654 ~~~~~~~~-----------~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~ 721 (782)
........ .....+++.|+|||.+.+. .++.++|||||||++|+|++|.+||...+.......+....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~ 243 (311)
T cd07866 164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLC 243 (311)
T ss_pred hccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 54332211 1123568889999988654 57889999999999999999999998777655443321110
Q ss_pred cc---------------------cCC-------CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 722 QR---------------------LEI-------PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 722 ~~---------------------~~~-------p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
.. ... ...+++.+.+||.+||..||.+|||+.++ +.|+||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~el------l~~~~f 311 (311)
T cd07866 244 GTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDA------LEHPYF 311 (311)
T ss_pred CCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHH------hcCCCC
Confidence 00 000 12345788999999999999999999999 556665
No 344
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=4.3e-35 Score=317.44 Aligned_cols=257 Identities=24% Similarity=0.366 Sum_probs=207.1
Q ss_pred eeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCC
Q 003978 507 LTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPR 586 (782)
Q Consensus 507 y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~g 586 (782)
|.+++.+|.|+++.||++...++.||||++............+.+|+.+++.++||||+++++++...+..|++|||+++
T Consensus 4 ~~i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~ 83 (314)
T cd08216 4 TLIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAY 83 (314)
T ss_pred hhhhHhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCC
Confidence 45666677778888888888889999999987655566678899999999999999999999999999999999999999
Q ss_pred CCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc-----
Q 003978 587 GSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL----- 660 (782)
Q Consensus 587 gsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~----- 660 (782)
++|.+++... ...+++..+..++.|++.||+|||+++ |+|+||||+||+++.++.+||+|||.+........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~--ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~ 161 (314)
T cd08216 84 GSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG--FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVV 161 (314)
T ss_pred CCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCcceEEEecCCceEEecCccceeecccccccccc
Confidence 9999999753 345889999999999999999999998 99999999999999999999999998864322111
Q ss_pred --cccCCCCCCcccCcccccCC--CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc---------------
Q 003978 661 --TTKTGKGTPQWMAPEVLRNE--PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN--------------- 721 (782)
Q Consensus 661 --~~~~~~Gt~~y~aPE~l~~~--~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~--------------- 721 (782)
......++..|+|||++.+. .++.++|||||||++|+|++|..||................
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
T cd08216 162 HDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYED 241 (314)
T ss_pred ccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcC
Confidence 12234577889999998763 47889999999999999999999998765443321110000
Q ss_pred -----------------cccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 722 -----------------QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 722 -----------------~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
.....+..++.++.+||.+||..||++|||+.++ |.|+||+..+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~l------l~~p~~~~~~ 302 (314)
T cd08216 242 SMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQL------LNHSFFKQCK 302 (314)
T ss_pred CcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHH------hcCchHhhhc
Confidence 0001112234678999999999999999999999 6789998765
No 345
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.4e-34 Score=311.42 Aligned_cols=255 Identities=17% Similarity=0.207 Sum_probs=189.9
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEcCC-----eEEEEEEeccCCCH--HH-------HHHHHHHHHHHHhCCCCceeE
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGS-----DVAVKVFSRQEYSD--EV-------IHSFRQEVSLMKRLRHPNVLL 566 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~-----~vAiK~~~~~~~~~--~~-------~~~~~~Ei~il~~l~HpnIv~ 566 (782)
++..++|++.++||+|+||.||+|.+.+. .+++|+........ +. ......+...+..+.|+||++
T Consensus 8 ~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~ 87 (294)
T PHA02882 8 DITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPK 87 (294)
T ss_pred ccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCc
Confidence 34557899999999999999999987543 46777643322111 10 011222334455678999999
Q ss_pred EeeeeecCC----ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC
Q 003978 567 FMGAVTSPQ----RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW 642 (782)
Q Consensus 567 l~~~~~~~~----~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~ 642 (782)
+++.+.... ..+++|+++ ..++.+.+... ...++..++.++.|++.||.|||+++ |+||||||+|||++.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~--iiHrDiKp~Nill~~~~ 163 (294)
T PHA02882 88 YYGCGSFKRCRMYYRFILLEKL-VENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHG--ISHGDIKPENIMVDGNN 163 (294)
T ss_pred EEEeeeEecCCceEEEEEEehh-ccCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCC
Confidence 998765443 346788887 44777777543 34577888999999999999999998 99999999999999999
Q ss_pred cEEEEecCCCccccccc-------ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHH
Q 003978 643 TVKVGDFGLSRLKHETY-------LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM-QVI 714 (782)
Q Consensus 643 ~vkL~DFGla~~~~~~~-------~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~-~~~ 714 (782)
.++|+|||+|+...... .......||+.|+|||++.+..++.++|||||||++|+|++|..||...... ...
T Consensus 164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~ 243 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLI 243 (294)
T ss_pred cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHH
Confidence 99999999997543211 1112346999999999999999999999999999999999999999877332 211
Q ss_pred HH-----hhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003978 715 GA-----VGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 759 (782)
Q Consensus 715 ~~-----i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L 759 (782)
.. +.........++.+++.+.+++..||..+|++||++.++++.|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 244 HAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 11 1111111122356789999999999999999999999998765
No 346
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=7.3e-35 Score=319.51 Aligned_cols=257 Identities=24% Similarity=0.409 Sum_probs=203.2
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC-----Cc
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP-----QR 576 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-----~~ 576 (782)
.++|++.++||+|+||.||+|.+ .+..||||+++... .......+.+|+.+++.++||||+++++++... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE-HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 36899999999999999999987 56789999986432 223456677899999999999999999886543 35
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
.|++|||+. ++|.+++.. ..+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 83 ~~lv~e~~~-~~l~~~~~~--~~l~~~~~~~i~~ql~~aL~~LH~~~--ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 83 VYIVQELME-TDLYKLIKT--QHLSNDHIQYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred EEEEehhcc-cCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 799999995 588888864 35899999999999999999999999 9999999999999999999999999987543
Q ss_pred cccc---cccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc------------
Q 003978 657 ETYL---TTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM------------ 720 (782)
Q Consensus 657 ~~~~---~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~------------ 720 (782)
.... ......|++.|+|||.+.+ ..++.++|||||||++|+|++|+.||...+.......+...
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (336)
T cd07849 158 PEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCI 237 (336)
T ss_pred ccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHh
Confidence 3211 1123468999999998755 56789999999999999999999999766543322111000
Q ss_pred ------------ccccC-----CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 721 ------------NQRLE-----IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 721 ------------~~~~~-----~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
..... ..+..++++.+||.+||..||++||++.++ +.|+||+....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~------l~hp~~~~~~~ 300 (336)
T cd07849 238 ISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEA------LAHPYLEQYHD 300 (336)
T ss_pred hchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHH------hcCccccccCC
Confidence 00000 113467889999999999999999999999 66788876543
No 347
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=327.04 Aligned_cols=253 Identities=34% Similarity=0.591 Sum_probs=222.7
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc---CC--eEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY---GS--DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 576 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~---~~--~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 576 (782)
+..++.++.++||+|.||.|++|.|+ |+ .||||+++...... ....|.+|+.+|.+|+|||+|++||+.-+ ..
T Consensus 107 Ipee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~-qp 184 (1039)
T KOG0199|consen 107 IPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLD-QP 184 (1039)
T ss_pred ccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeecc-ch
Confidence 44567888899999999999999984 32 48999998766544 56789999999999999999999999887 77
Q ss_pred eeEEEeecCCCCHHHHHhh-cCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 577 LCIVTEFLPRGSLFRLLQR-NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~-~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
+.||||++++|+|.+.|.+ ....|.....-.++.||+.||.||..++ +|||||-..||||-....|||+|||+.+-.
T Consensus 185 ~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr--lvHRDLAARNlllasprtVKI~DFGLmRaL 262 (1039)
T KOG0199|consen 185 AMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR--LVHRDLAARNLLLASPRTVKICDFGLMRAL 262 (1039)
T ss_pred hhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh--hhhhhhhhhhheecccceeeeecccceecc
Confidence 8999999999999999977 5556888888899999999999999988 999999999999998889999999999865
Q ss_pred ccc---cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCC
Q 003978 656 HET---YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVD 731 (782)
Q Consensus 656 ~~~---~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~ 731 (782)
... |.......-...|+|||.+....++.++|+|++||+|||||+ |.-||.+....+++..+. ...++..|+.|+
T Consensus 263 g~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD-~~erLpRPk~cs 341 (1039)
T KOG0199|consen 263 GENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID-AGERLPRPKYCS 341 (1039)
T ss_pred CCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc-ccccCCCCCCCh
Confidence 443 222333345678999999999999999999999999999999 799999999999999887 777889999999
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003978 732 PRWAAIVESCWHSDPQCRPSFQELVDKL 759 (782)
Q Consensus 732 ~~l~~LI~~cL~~dP~~RPs~~ell~~L 759 (782)
.++++++++||..+|.+||++..|.+.+
T Consensus 342 edIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 342 EDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred HHHHHHHHHhccCCccccccHHHHHHhH
Confidence 9999999999999999999999996543
No 348
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.3e-34 Score=310.21 Aligned_cols=257 Identities=23% Similarity=0.384 Sum_probs=207.8
Q ss_pred ceeEeeeeccCCcEEEEEEEE-----cCCeEEEEEEeccCCC--HHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCce
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW-----YGSDVAVKVFSRQEYS--DEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~-----~~~~vAiK~~~~~~~~--~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 577 (782)
+|++.+.||.|+||.||++.. .+..||+|+++..... ....+.+.+|+++++.+ +|+||+++++.++.+..+
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 488999999999999999986 5678999998754321 23346678899999999 599999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|+||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.+||+|||++.....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~--i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 157 (290)
T cd05613 81 HLILDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLHKLG--IIYRDIKLENILLDSNGHVVLTDFGLSKEFHE 157 (290)
T ss_pred EEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeEECCCCCEEEeeCccceeccc
Confidence 9999999999999999764 46888999999999999999999998 99999999999999999999999999875433
Q ss_pred cc-ccccCCCCCCcccCcccccCC--CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHh--hccccccCCCCCCCH
Q 003978 658 TY-LTTKTGKGTPQWMAPEVLRNE--PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAV--GFMNQRLEIPKDVDP 732 (782)
Q Consensus 658 ~~-~~~~~~~Gt~~y~aPE~l~~~--~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i--~~~~~~~~~p~~~~~ 732 (782)
.. .......|+..|++||.+.+. .++.++|||||||++|+|++|..||...........+ .........+..+++
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (290)
T cd05613 158 DEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSA 237 (290)
T ss_pred ccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCCCccCCH
Confidence 21 112234689999999998753 4678899999999999999999999643321111111 112234456777899
Q ss_pred HHHHHHHHhhhhCCCCCC-----CHHHHHHHHHHHHHHHhhccc
Q 003978 733 RWAAIVESCWHSDPQCRP-----SFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 733 ~l~~LI~~cL~~dP~~RP-----s~~ell~~L~~L~~~~~~~~~ 771 (782)
.+.+||.+||..||++|| ++.++ +.++||+...
T Consensus 238 ~~~~ll~~~l~~~p~~R~~~~~~~~~~l------~~~~~~~~~~ 275 (290)
T cd05613 238 LAKDIIQRLLMKDPKKRLGCGPSDADEI------KKHPFFQKIN 275 (290)
T ss_pred HHHHHHHHHhcCCHHHhcCCCCCCHHHH------HcCcccccCC
Confidence 999999999999999997 78888 5667776554
No 349
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=7.1e-35 Score=306.67 Aligned_cols=247 Identities=28% Similarity=0.470 Sum_probs=204.7
Q ss_pred ceeEeeeeccCCcEEEEEEEEcC--CeEEEEEEeccC---CCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 506 DLTIGEQIGQGSCGTVYHAVWYG--SDVAVKVFSRQE---YSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~~~--~~vAiK~~~~~~---~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
+|.+.++||+|+||.||++.... ..+++|+++... ........+..|+.+++.++||||+++++++......+++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 58899999999999999998743 346666665422 2223334566799999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 581 TEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~---~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|||+++++|.+++.. ....+++..++.++.|++.||.|||+.+ ++|+||||+||+++. +.++|+|||++.....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~ 157 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR--ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMG 157 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC--ccccCCChhheEeec-CCEeecccCceeecCC
Confidence 999999999998853 3456899999999999999999999998 999999999999975 5799999999876544
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHH
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 737 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~L 737 (782)
.........|++.|++||.+.+..++.++|+||||+++|+|++|..||...........+. ....+.++..++.++.++
T Consensus 158 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l 236 (260)
T cd08222 158 SCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIV-EGPTPSLPETYSRQLNSI 236 (260)
T ss_pred CcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH-cCCCCCCcchhcHHHHHH
Confidence 4333445568999999999988888999999999999999999999998766555444432 233445567788999999
Q ss_pred HHHhhhhCCCCCCCHHHHH
Q 003978 738 VESCWHSDPQCRPSFQELV 756 (782)
Q Consensus 738 I~~cL~~dP~~RPs~~ell 756 (782)
|.+||..||++||++.+++
T Consensus 237 i~~~l~~~p~~Rp~~~~il 255 (260)
T cd08222 237 MQSMLNKDPSLRPSAAEIL 255 (260)
T ss_pred HHHHhcCChhhCcCHHHHh
Confidence 9999999999999999994
No 350
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.2e-34 Score=302.44 Aligned_cols=238 Identities=29% Similarity=0.452 Sum_probs=206.8
Q ss_pred eccCCcEEEEEEEEc--CCeEEEEEEeccCCC-HHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCCCCH
Q 003978 513 IGQGSCGTVYHAVWY--GSDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSL 589 (782)
Q Consensus 513 IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ggsL 589 (782)
||.|+||.||++... ++.+++|++...... ......+..|+.+++.++||||+++++.++.+..+|++|||+.+++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999874 678999998766442 34566788999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCCCCC
Q 003978 590 FRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTP 669 (782)
Q Consensus 590 ~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~ 669 (782)
.+++.... .+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++..............++.
T Consensus 81 ~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh~~~--~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~ 157 (250)
T cd05123 81 FSHLSKEG-RFSEERARFYAAEIVLALEYLHSLG--IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTP 157 (250)
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCc
Confidence 99997653 5899999999999999999999988 99999999999999999999999999876544322334456889
Q ss_pred cccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCC
Q 003978 670 QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCR 749 (782)
Q Consensus 670 ~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~R 749 (782)
.|++||.+.+...+.++|+||||+++|+|++|..||...+.......+.. ....++..++..+.++|.+||..||++|
T Consensus 158 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~i~~~l~~~p~~R 235 (250)
T cd05123 158 EYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK--DPLRFPEFLSPEARDLISGLLQKDPTKR 235 (250)
T ss_pred cccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCHHHHHHHHHHhcCCHhhC
Confidence 99999999988889999999999999999999999987776555545432 4567788889999999999999999999
Q ss_pred CCH---HHH
Q 003978 750 PSF---QEL 755 (782)
Q Consensus 750 Ps~---~el 755 (782)
|++ .++
T Consensus 236 ~~~~~~~~l 244 (250)
T cd05123 236 LGSGGAEEI 244 (250)
T ss_pred CCcccHHHH
Confidence 999 666
No 351
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-36 Score=282.73 Aligned_cols=255 Identities=25% Similarity=0.351 Sum_probs=214.6
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
+|.-.++||+|+||+||+++. .++-||+|.++....++.......+|+-+|+.++|.|||+++++...++.+.+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 466678999999999999986 455699999988776666677888999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccccc
Q 003978 584 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTK 663 (782)
Q Consensus 584 ~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 663 (782)
|.. +|..+.......++.+.+..++.|+++||.|+|+++ +.|||+||.|+||+.+|.+||+|||+++..+.+-....
T Consensus 83 cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshn--vlhrdlkpqnllin~ngelkladfglarafgipvrcys 159 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHN--VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYS 159 (292)
T ss_pred hhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhh--hhhccCCcceEEeccCCcEEecccchhhhcCCceEeee
Confidence 954 999999887788999999999999999999999999 99999999999999999999999999998777655555
Q ss_pred CCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccc------c---CCC-----
Q 003978 664 TGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQR------L---EIP----- 727 (782)
Q Consensus 664 ~~~Gt~~y~aPE~l~~~~-~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~------~---~~p----- 727 (782)
..+-|..|++|.++.|.. |+...|+||-||++.|+.. |++-|.+.+....+..|-..... + .+|
T Consensus 160 aevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~y 239 (292)
T KOG0662|consen 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPY 239 (292)
T ss_pred ceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCccc
Confidence 667899999999998866 6788999999999999988 77778887766655444221111 1 011
Q ss_pred -------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 728 -------------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 728 -------------~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
+.++..-++|+.++|.-+|..|.++++. ++|+||.-
T Consensus 240 p~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaa------lqhpyf~d 288 (292)
T KOG0662|consen 240 PIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAA------LQHPYFSD 288 (292)
T ss_pred CCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHH------hcCccccc
Confidence 1223345899999999999999999998 78899854
No 352
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.3e-34 Score=317.00 Aligned_cols=263 Identities=24% Similarity=0.331 Sum_probs=209.2
Q ss_pred ccee-EeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHH------------HHHHHHHHHHHHHhCCCCceeEEee
Q 003978 505 EDLT-IGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDE------------VIHSFRQEVSLMKRLRHPNVLLFMG 569 (782)
Q Consensus 505 ~~y~-i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~------------~~~~~~~Ei~il~~l~HpnIv~l~~ 569 (782)
++|. +.+.||.|+||.||++.. .++.||||+++....... ....+.+|+++++.++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4554 557799999999999986 467899999865432210 0124678999999999999999999
Q ss_pred eeecCCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEec
Q 003978 570 AVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDF 649 (782)
Q Consensus 570 ~~~~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DF 649 (782)
++......|++|||+. ++|.+++... ..+++..+..++.|++.||.|||+++ |+|+||||+||+++.++.++|+||
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~--i~H~dl~~~nill~~~~~~kl~df 163 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRK-IRLTESQVKCILLQILNGLNVLHKWY--FMHRDLSPANIFINSKGICKIADF 163 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eecccccHHHeEECCCCCEEECCc
Confidence 9999999999999996 5999998653 45899999999999999999999998 999999999999999999999999
Q ss_pred CCCcccccc--------------cccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 003978 650 GLSRLKHET--------------YLTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVI 714 (782)
Q Consensus 650 Gla~~~~~~--------------~~~~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~ 714 (782)
|++...... ........+++.|+|||.+.+. .++.++|||||||++|+|++|..||...+.....
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~ 243 (335)
T PTZ00024 164 GLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQL 243 (335)
T ss_pred cceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 998754411 1111233568899999998764 4688999999999999999999999887765544
Q ss_pred HHhhcccccc--------------------------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003978 715 GAVGFMNQRL--------------------------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 768 (782)
Q Consensus 715 ~~i~~~~~~~--------------------------~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~ 768 (782)
..+......+ ......+.++.+||.+||..+|++||++.++ +.++||+
T Consensus 244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~------l~~~~~~ 317 (335)
T PTZ00024 244 GRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEA------LKHEYFK 317 (335)
T ss_pred HHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHH------hcCcccC
Confidence 4332111000 1123457889999999999999999999999 6789998
Q ss_pred cccCcCCCC
Q 003978 769 ASRSTVGDS 777 (782)
Q Consensus 769 ~~~~~~~~~ 777 (782)
.-...+.+.
T Consensus 318 ~~~~~~~~~ 326 (335)
T PTZ00024 318 SDPLPCDPS 326 (335)
T ss_pred CCCCCCCcc
Confidence 776665543
No 353
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=9.9e-35 Score=319.44 Aligned_cols=254 Identities=26% Similarity=0.380 Sum_probs=204.9
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC------
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ------ 575 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------ 575 (782)
..+|.+.+.||+|+||.||+|.. .++.||||++.+..........+.+|+.+++.++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 46899999999999999999986 4778999998765434444566788999999999999999999986543
Q ss_pred ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
.+|+||||+. .+|..++. ..+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++..
T Consensus 94 ~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~--i~H~dlkp~NIll~~~~~~kL~dfg~~~~~ 167 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG---HPLSEDKVQYLVYQMLCGLKYIHSAG--IIHRDLKPGNLAVNEDCELKILDFGLARHA 167 (342)
T ss_pred eEEEEecccc-cCHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEeeCCCCcCC
Confidence 4689999995 47777653 35888999999999999999999998 999999999999999999999999998754
Q ss_pred ccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc------------
Q 003978 656 HETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ------------ 722 (782)
Q Consensus 656 ~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~------------ 722 (782)
... .....+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||...+.......+.....
T Consensus 168 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (342)
T cd07879 168 DAE---MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLED 244 (342)
T ss_pred CCC---CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcc
Confidence 332 223467889999999876 4578899999999999999999999987765443332211000
Q ss_pred ---------cc--------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 723 ---------RL--------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 723 ---------~~--------~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
.. ...+..++.+.+||.+||..||.+||++.++ +.|+||+..+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~------l~h~~f~~~~~ 305 (342)
T cd07879 245 KAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEA------LEHPYFDSFRD 305 (342)
T ss_pred cchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHH------hcCcchhhccc
Confidence 00 0113467889999999999999999999999 66788877654
No 354
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.5e-34 Score=307.65 Aligned_cols=247 Identities=26% Similarity=0.348 Sum_probs=202.2
Q ss_pred eeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC--CceeEEEe
Q 003978 507 LTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP--QRLCIVTE 582 (782)
Q Consensus 507 y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~~lv~E 582 (782)
|++.++||.|+||.||++... +..+|+|++............+.+|+.+++.++||||+++++++... ...++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 678999999999999999874 57899999986643344456778899999999999999999999887 88999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc-c
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL-T 661 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~-~ 661 (782)
|+++ +|..++......+++..++.++.||+.||+|||+.+ ++|+||||+||++++++.++|+|||++........ .
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~--~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~ 157 (287)
T cd07840 81 YMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNG--ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSAD 157 (287)
T ss_pred cccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCcHHHeEEcCCCCEEEccccceeeccCCCccc
Confidence 9964 899998766567999999999999999999999998 99999999999999999999999999876544321 1
Q ss_pred ccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc-----------------
Q 003978 662 TKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR----------------- 723 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~----------------- 723 (782)
.....++..|+|||.+.+ ..++.++|||||||++|+|++|..||...+.......+......
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07840 158 YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFEN 237 (287)
T ss_pred ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhh
Confidence 223356889999998765 45788999999999999999999999877765443332111000
Q ss_pred ------------cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHH
Q 003978 724 ------------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELV 756 (782)
Q Consensus 724 ------------~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell 756 (782)
..+...++..+.++|.+||..+|.+||++.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l 282 (287)
T cd07840 238 LKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQAL 282 (287)
T ss_pred ccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 001112388999999999999999999999994
No 355
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.9e-34 Score=307.21 Aligned_cols=251 Identities=27% Similarity=0.351 Sum_probs=202.3
Q ss_pred eeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC---CCCceeEEeeeeecCCc-----
Q 003978 507 LTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL---RHPNVLLFMGAVTSPQR----- 576 (782)
Q Consensus 507 y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l---~HpnIv~l~~~~~~~~~----- 576 (782)
|++.+.||+|+||.||++.+. +..||+|+++...........+.+|+.+++.+ .||||+++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 678999999999999999984 67899999975544333345566788777666 59999999999987776
Q ss_pred eeEEEeecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
++++|||+.+ +|.+++.... ..+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++...
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~--i~h~~l~~~nili~~~~~~~l~dfg~~~~~ 157 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR--IVHRDLKPQNILVTSDGQVKIADFGLARIY 157 (287)
T ss_pred eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCChhhEEEccCCCEEEeccCcceec
Confidence 8999999964 8999886643 35899999999999999999999998 999999999999999999999999998765
Q ss_pred ccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc---c---------
Q 003978 656 HETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ---R--------- 723 (782)
Q Consensus 656 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~---~--------- 723 (782)
..... .....+++.|+|||++.+..++.++|||||||++|+|++|.+||......+....+..... .
T Consensus 158 ~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (287)
T cd07838 158 SFEMA-LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSL 236 (287)
T ss_pred cCCcc-cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCccc
Confidence 43321 1233578899999999998899999999999999999999999987776554443321000 0
Q ss_pred -------------cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 724 -------------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 724 -------------~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
....+.+++.+.+||.+||..||.+||++.++ +.|+||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~i------l~~~~~ 287 (287)
T cd07838 237 PRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEA------LQHPYF 287 (287)
T ss_pred chhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHH------hcCcCC
Confidence 00112346788999999999999999999999 456665
No 356
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.6e-34 Score=310.73 Aligned_cols=250 Identities=27% Similarity=0.430 Sum_probs=208.2
Q ss_pred eeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCCC
Q 003978 510 GEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRG 587 (782)
Q Consensus 510 ~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg 587 (782)
..+||+|+||.||++.. .+..||||.+.... ......+.+|+.+++.++|+||+++++.+..++..|++|||++++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 102 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 102 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc--hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCC
Confidence 46799999999999987 56789999875432 234466888999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCCC
Q 003978 588 SLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKG 667 (782)
Q Consensus 588 sL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~G 667 (782)
+|.+++.. ..+++..++.++.|++.+|+|||+.+ |+|+||||+||+++.++.++|+|||++..............|
T Consensus 103 ~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~g--ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 178 (292)
T cd06657 103 ALTDIVTH--TRMNEEQIAAVCLAVLKALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVG 178 (292)
T ss_pred cHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCCEEEcccccceeccccccccccccc
Confidence 99998864 35788999999999999999999998 999999999999999999999999988654332222234568
Q ss_pred CCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-ccccCCCCCCCHHHHHHHHHhhhhCC
Q 003978 668 TPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM-NQRLEIPKDVDPRWAAIVESCWHSDP 746 (782)
Q Consensus 668 t~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~-~~~~~~p~~~~~~l~~LI~~cL~~dP 746 (782)
++.|++||.+.+..++.++|+|||||++|+|++|..||...........+... .........+++.+.++|.+||..||
T Consensus 179 ~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P 258 (292)
T cd06657 179 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDP 258 (292)
T ss_pred CccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCc
Confidence 89999999998888899999999999999999999999877665554443221 11222334678999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 747 QCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 747 ~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
.+||++.++ +.|+||....
T Consensus 259 ~~R~~~~~l------l~~~~~~~~~ 277 (292)
T cd06657 259 AQRATAAEL------LKHPFLAKAG 277 (292)
T ss_pred ccCcCHHHH------hcChHHhccC
Confidence 999999999 5689986544
No 357
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=3.7e-34 Score=315.40 Aligned_cols=259 Identities=26% Similarity=0.349 Sum_probs=207.8
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC-----
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP----- 574 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~----- 574 (782)
...++|.+.+.||+|+||.||++.. .+..||+|++............+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~ 93 (345)
T cd07877 14 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 93 (345)
T ss_pred hccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccc
Confidence 3457899999999999999999986 567899999876543444456778899999999999999999987543
Q ss_pred -CceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCc
Q 003978 575 -QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 653 (782)
Q Consensus 575 -~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~ 653 (782)
...|++++++ +++|.+++... .+++..++.++.||+.||+|||+.+ |+|+||||+||+++.++.+||+|||++.
T Consensus 94 ~~~~~lv~~~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~~~~~kl~dfg~~~ 168 (345)
T cd07877 94 FNDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 168 (345)
T ss_pred cccEEEEehhc-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChHHEEEcCCCCEEEecccccc
Confidence 3478888888 78999888643 5889999999999999999999998 9999999999999999999999999987
Q ss_pred ccccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc----------
Q 003978 654 LKHETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ---------- 722 (782)
Q Consensus 654 ~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~---------- 722 (782)
..... .....+++.|+|||++.+ ..++.++|||||||++|+|++|..||...+.......+.....
T Consensus 169 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (345)
T cd07877 169 HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 245 (345)
T ss_pred ccccc---ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhc
Confidence 54332 223467899999999876 5678899999999999999999999976665443322211000
Q ss_pred -----------ccC--------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcC
Q 003978 723 -----------RLE--------IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTV 774 (782)
Q Consensus 723 -----------~~~--------~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~ 774 (782)
... .....++++.+||.+||..||.+||++.++ +.|+||+......
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~------l~h~~f~~~~~~~ 310 (345)
T cd07877 246 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA------LAHAYFAQYHDPD 310 (345)
T ss_pred ccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHH------hcChhhhhcCCCC
Confidence 000 112357889999999999999999999999 6789998654433
No 358
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.4e-34 Score=309.50 Aligned_cols=259 Identities=23% Similarity=0.346 Sum_probs=210.4
Q ss_pred ceeEeeeeccCCcEEEEEEEE-----cCCeEEEEEEeccCCC--HHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCce
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW-----YGSDVAVKVFSRQEYS--DEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~-----~~~~vAiK~~~~~~~~--~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 577 (782)
+|++.+.||+|+||.||++.. .++.||||++++.... ......+..|++++..+ +||||+++++.+..+..+
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 488999999999999999975 3567999998754321 23445678899999999 599999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|+||||+.+++|.+++... ..+++..+..++.|++.+|.|||+.+ ++|+||||.||+++.++.++|+|||++.....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~--~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 157 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLHQLG--IIYRDIKLENILLDSEGHVVLTDFGLSKEFLA 157 (288)
T ss_pred EEEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCCCCEEEEECcccccccc
Confidence 9999999999999998754 46888999999999999999999988 99999999999999999999999999875433
Q ss_pred cc-ccccCCCCCCcccCcccccCCC--CCchhHHHHHHHHHHHHHcCCCCCCCCChH----HHHHHhhccccccCCCCCC
Q 003978 658 TY-LTTKTGKGTPQWMAPEVLRNEP--SDEKSDVYSFGVILWELATEKIPWDNLNSM----QVIGAVGFMNQRLEIPKDV 730 (782)
Q Consensus 658 ~~-~~~~~~~Gt~~y~aPE~l~~~~--~s~~sDIwSLG~ll~elltG~~Pf~~~~~~----~~~~~i~~~~~~~~~p~~~ 730 (782)
.. .......|++.|++||.+.+.. .+.++||||||+++|+|++|..||...... .....+ .......+..+
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 235 (288)
T cd05583 158 EEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRI--LKSKPPFPKTM 235 (288)
T ss_pred ccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHH--HccCCCCCccc
Confidence 22 1122346899999999987765 678999999999999999999999643221 111111 23345567778
Q ss_pred CHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 731 DPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 731 ~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
++.+.+||.+||..||++|||+.++.+. +.++||+....
T Consensus 236 ~~~l~~li~~~l~~~p~~R~t~~~~~~~---l~~~~~~~~~~ 274 (288)
T cd05583 236 SAEARDFIQKLLEKDPKKRLGANGADEI---KNHPFFQGIDW 274 (288)
T ss_pred CHHHHHHHHHHhcCCHhhccCcchHHHH---hcCcccccCCH
Confidence 9999999999999999999997766554 66789877643
No 359
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-35 Score=309.89 Aligned_cols=256 Identities=25% Similarity=0.355 Sum_probs=208.5
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCC--C----ceeEEeeeee
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRH--P----NVLLFMGAVT 572 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~H--p----nIv~l~~~~~ 572 (782)
+.+.++|++.+.+|+|+||.|-.+.+. +..||||+++.- ....++.+-|+++|+++.+ | -+|++.+||.
T Consensus 85 D~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V---~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFd 161 (415)
T KOG0671|consen 85 DILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV---DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFD 161 (415)
T ss_pred cccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH---HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhh
Confidence 456789999999999999999999874 557999998643 3445667779999999942 2 3788999999
Q ss_pred cCCceeEEEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc------------
Q 003978 573 SPQRLCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD------------ 639 (782)
Q Consensus 573 ~~~~~~lv~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~------------ 639 (782)
-.+++|||+|.+ |-|++++|..+ ..+++...+..|++||+++++|||+.+ ++|.||||+|||+.
T Consensus 162 yrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k--l~HTDLKPENILfvss~~~~~~~~k~ 238 (415)
T KOG0671|consen 162 YRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK--LTHTDLKPENILFVSSEYFKTYNPKK 238 (415)
T ss_pred ccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc--eeecCCChheEEEeccceEEEeccCC
Confidence 999999999999 77999999764 467899999999999999999999998 99999999999983
Q ss_pred --------CCCcEEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH
Q 003978 640 --------KHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM 711 (782)
Q Consensus 640 --------~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~ 711 (782)
++..|+|+|||.|+..++.. ...+.|..|+|||++.|-.++.+.||||+||+|+|+++|..-|+..+..
T Consensus 239 ~~~~~r~~ks~~I~vIDFGsAtf~~e~h---s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~ 315 (415)
T KOG0671|consen 239 KVCFIRPLKSTAIKVIDFGSATFDHEHH---STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENL 315 (415)
T ss_pred ccceeccCCCcceEEEecCCcceeccCc---ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcH
Confidence 13469999999998766543 3557799999999999999999999999999999999999999887755
Q ss_pred HHHHHhhccccc-------------------cCCCCC-------------------------CCHHHHHHHHHhhhhCCC
Q 003978 712 QVIGAVGFMNQR-------------------LEIPKD-------------------------VDPRWAAIVESCWHSDPQ 747 (782)
Q Consensus 712 ~~~~~i~~~~~~-------------------~~~p~~-------------------------~~~~l~~LI~~cL~~dP~ 747 (782)
+-+..+....++ ...+.. --.+|.+||.+||..||.
T Consensus 316 EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~ 395 (415)
T KOG0671|consen 316 EHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPA 395 (415)
T ss_pred HHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcc
Confidence 533322211110 110100 012589999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhhccc
Q 003978 748 CRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 748 ~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
+|+|+.|+ |.|+||+-..
T Consensus 396 ~RiTl~EA------L~HpFF~~~~ 413 (415)
T KOG0671|consen 396 RRITLREA------LSHPFFARLT 413 (415)
T ss_pred ccccHHHH------hcCHHhhcCC
Confidence 99999999 7899998654
No 360
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.5e-34 Score=316.94 Aligned_cols=257 Identities=22% Similarity=0.330 Sum_probs=204.5
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecC--Cce
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSP--QRL 577 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~--~~~ 577 (782)
..++|++.+.||+|+||.||+|.. .+..+|||.+............+.+|+.+++.+ +||||+++++++... ..+
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 456899999999999999999987 467899998865433334445677899999999 999999999988643 368
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|+||||+. ++|..++... .+++..++.++.||+.||.|||+.+ |+|+||||+||+++.++.+||+|||++.....
T Consensus 85 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~--i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~ 159 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSGN--VIHRDLKPSNILLNSDCRVKLADFGLARSLSE 159 (337)
T ss_pred EEEecccc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCcEEEeeccchhcccc
Confidence 99999996 5999998754 6788899999999999999999988 99999999999999999999999999875433
Q ss_pred ccc-----cccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc----------
Q 003978 658 TYL-----TTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN---------- 721 (782)
Q Consensus 658 ~~~-----~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~---------- 721 (782)
... ......|++.|+|||.+.+ ..++.++|||||||++|+|++|+.||...........+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd07852 160 LEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIES 239 (337)
T ss_pred ccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 221 1223468999999998765 457889999999999999999999997665443322211100
Q ss_pred -------------------cccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 722 -------------------QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 722 -------------------~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
......+.++.++.+||.+||+.||.+|||+.+++ .++|++.-
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il------~~~~~~~~ 301 (337)
T cd07852 240 IKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEAL------EHPYVAQF 301 (337)
T ss_pred HHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHh------hChhhhhh
Confidence 00112234789999999999999999999999994 56777543
No 361
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=2.2e-34 Score=311.80 Aligned_cols=253 Identities=31% Similarity=0.443 Sum_probs=208.1
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
.+.|...+.||+|+||.||++.. .+..++||.+..... .......+.+|+++++.++|+||+++++++......++|
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 93 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 93 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEE
Confidence 34688889999999999999987 466799999875432 334456788899999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 660 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 660 (782)
|||+. ++|.+++......+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++......
T Consensus 94 ~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~--i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~-- 168 (308)
T cd06634 94 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 168 (308)
T ss_pred EEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHhEEECCCCcEEECCcccceeecCc--
Confidence 99995 5888888665667899999999999999999999988 999999999999999999999999998654332
Q ss_pred cccCCCCCCcccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHH
Q 003978 661 TTKTGKGTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 737 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~---~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~L 737 (782)
....|++.|+|||.+. ...++.++|||||||++|+|++|..||...+.......+.........+..++..+.+|
T Consensus 169 --~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 246 (308)
T cd06634 169 --NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNF 246 (308)
T ss_pred --ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHH
Confidence 2346789999999975 34578899999999999999999999987765554444332222222344688999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 738 VESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 738 I~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
|.+||..+|.+||++.+++ .++|+..
T Consensus 247 i~~cl~~~P~~Rp~~~~ll------~~~~~~~ 272 (308)
T cd06634 247 VDSCLQKIPQDRPTSEVLL------KHRFVLR 272 (308)
T ss_pred HHHHhhCCcccCCCHHHHh------hCccccc
Confidence 9999999999999999994 5566543
No 362
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1.2e-34 Score=307.76 Aligned_cols=252 Identities=26% Similarity=0.382 Sum_probs=207.1
Q ss_pred eeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeec
Q 003978 507 LTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFL 584 (782)
Q Consensus 507 y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~ 584 (782)
|++.+.||+|.||.||++... ++.|++|++............+..|+.+++.++|+||+++++++.....+++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 567889999999999999884 678999999765433444566778999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccC
Q 003978 585 PRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKT 664 (782)
Q Consensus 585 ~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 664 (782)
. ++|.+++......+++..++.++.|++.||+|||+++ |+|+||+|+||+++.++.++|+|||++............
T Consensus 81 ~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (282)
T cd07829 81 D-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHR--ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTH 157 (282)
T ss_pred C-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChheEEEcCCCCEEEecCCcccccCCCccccCc
Confidence 6 5999999876557999999999999999999999998 999999999999999999999999998765443322233
Q ss_pred CCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc----------------c----
Q 003978 665 GKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ----------------R---- 723 (782)
Q Consensus 665 ~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~----------------~---- 723 (782)
..++..|+|||.+.+. .++.++|||||||++|+|++|..||...+.......+..... .
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (282)
T cd07829 158 EVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFP 237 (282)
T ss_pred cccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccccccc
Confidence 4567889999998776 788999999999999999999999987765443332211000 0
Q ss_pred -------cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 724 -------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 724 -------~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
....+.++..+.++|.+||..||++||++.++ +.++||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~------l~~p~~ 282 (282)
T cd07829 238 KFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEA------LKHPYF 282 (282)
T ss_pred ccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHH------hhCcCC
Confidence 01112357899999999999999999999999 556665
No 363
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=4.2e-34 Score=312.80 Aligned_cols=260 Identities=27% Similarity=0.386 Sum_probs=208.5
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec-CCceeE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS-PQRLCI 579 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-~~~~~l 579 (782)
..++|++.+.||.|+||.||++.. .+..||||.+.+........+.+..|+.+++.++||||+++++++.. ....|+
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l 87 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF 87 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence 346899999999999999999986 46679999886544334445677889999999999999999999865 457899
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
+|||+ +++|..++.. ..+++..+..++.||+.||.|||+.+ |+|+||||.||+++.++.++|+|||++......
T Consensus 88 v~e~~-~~~L~~~~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~--iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~- 161 (328)
T cd07856 88 VTELL-GTDLHRLLTS--RPLEKQFIQYFLYQILRGLKYVHSAG--VVHRDLKPSNILINENCDLKICDFGLARIQDPQ- 161 (328)
T ss_pred Eeehh-ccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEeECCCCCEEeCccccccccCCC-
Confidence 99999 6689988864 34788888899999999999999998 999999999999999999999999998754332
Q ss_pred ccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhc-------------------
Q 003978 660 LTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGF------------------- 719 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~------------------- 719 (782)
.....+++.|+|||.+.+ ..++.++|||||||++|+|++|..||...........+..
T Consensus 162 --~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (328)
T cd07856 162 --MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTL 239 (328)
T ss_pred --cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhH
Confidence 123467889999999866 5688999999999999999999999977654322211110
Q ss_pred -----cccccC-----CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcCCC
Q 003978 720 -----MNQRLE-----IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVGD 776 (782)
Q Consensus 720 -----~~~~~~-----~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~~~ 776 (782)
...... ..+.++.++.++|.+||..+|++||++.++ +.++||+.......+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~el------l~~~~~~~~~~~~~~ 300 (328)
T cd07856 240 RFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEA------LAHPYLAPYHDPTDE 300 (328)
T ss_pred HHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHH------hcCCccccccCCccc
Confidence 000001 113578899999999999999999999999 678898766655443
No 364
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.6e-34 Score=317.90 Aligned_cols=257 Identities=26% Similarity=0.369 Sum_probs=210.1
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc----
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR---- 576 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~---- 576 (782)
..++|++.+.||.|+||.||++... +..||||++............+.+|+.+++.++||||+++++++.....
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4578999999999999999999884 6779999987654444455677889999999999999999998876554
Q ss_pred --eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 577 --LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 577 --~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
+|+|+||+ +++|.+++.. ..+++..++.++.||+.||.|||+.+ |+|+||||+||+++.++.++|+|||++..
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~~g--i~H~dlkp~Nill~~~~~~kL~dfg~~~~ 167 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHSAG--IIHRDLKPSNIAVNEDCELKILDFGLARH 167 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCCCCEEEcccccccc
Confidence 89999999 6799999875 35899999999999999999999998 99999999999999999999999999876
Q ss_pred cccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc----------
Q 003978 655 KHETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR---------- 723 (782)
Q Consensus 655 ~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~---------- 723 (782)
.... .....+++.|+|||++.+ ..++.++|||||||++|+|++|..||...+.......+......
T Consensus 168 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 244 (343)
T cd07851 168 TDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKIS 244 (343)
T ss_pred cccc---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcc
Confidence 5432 224467899999999865 46788999999999999999999999876655443332111000
Q ss_pred -------------------cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 724 -------------------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 724 -------------------~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
......++..+.+||.+||..||++|||+.++ +.|+||+.....
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~el------l~h~~~~~~~~~ 307 (343)
T cd07851 245 SESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEA------LAHPYLAEYHDP 307 (343)
T ss_pred chhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHH------hcCCCccccCCC
Confidence 01123468899999999999999999999999 678998765444
No 365
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=4.3e-34 Score=312.88 Aligned_cols=256 Identities=24% Similarity=0.310 Sum_probs=202.2
Q ss_pred ceeEeeeeccCCcEEEEEEEEc----CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeec----CCc
Q 003978 506 DLTIGEQIGQGSCGTVYHAVWY----GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTS----PQR 576 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~~----~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~----~~~ 576 (782)
+|++.+.||+|+||.||++... +..||||.+..........+.+.+|+.+++.+ .||||+++++.+.. ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4889999999999999999985 45799999875433334456778899999999 59999999987532 245
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
+|++|+|+. ++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++....
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~g--ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSG-QPLTDAHFQSFIYQILCGLKYIHSAN--VLHRDLKPGNLLVNADCELKICDFGLARGFS 156 (332)
T ss_pred EEEEEeccc-CCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence 789999994 6899988653 46899999999999999999999998 9999999999999999999999999997544
Q ss_pred cccc----cccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc----------
Q 003978 657 ETYL----TTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN---------- 721 (782)
Q Consensus 657 ~~~~----~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~---------- 721 (782)
.... ......|++.|+|||++.+ ..++.++|||||||++|+|++|..||...+.......+....
T Consensus 157 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (332)
T cd07857 157 ENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSR 236 (332)
T ss_pred cccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 3211 1223468999999998765 567899999999999999999999998765433222211000
Q ss_pred --------------c-----ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 722 --------------Q-----RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 722 --------------~-----~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
. .....+.++..+.+||.+||+.||.+|||+.++ +.++|+..-+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~l------l~~~~~~~~~ 299 (332)
T cd07857 237 IGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEA------LEHPYLAIWH 299 (332)
T ss_pred hhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHH------hcChhhhhhc
Confidence 0 001123467899999999999999999999999 5778886443
No 366
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=6.2e-34 Score=338.88 Aligned_cols=147 Identities=28% Similarity=0.445 Sum_probs=133.3
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
.++|.++++||+|+||.||+|.+. ++.||||+++.... .......+..|+.+++.++||||+++++++.....+|||
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 468999999999999999999986 78899999976543 445567788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 653 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~ 653 (782)
|||+.+++|.+++.... .+++..++.++.||+.||.|||.++ ||||||||+||||+.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~~~-~l~~~~~~~i~~qil~aL~yLH~~g--IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIYG-YFDEEMAVKYISEVALALDYLHRHG--IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999997643 5888999999999999999999998 9999999999999999999999999875
No 367
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=2.8e-34 Score=315.84 Aligned_cols=254 Identities=24% Similarity=0.379 Sum_probs=201.8
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC-------
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP------- 574 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------- 574 (782)
..+|++.+.||.|+||.||+|.. .+..||+|++..... ...+.+.+|+++++.++||||+++++.+...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED 81 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence 36899999999999999999987 467899999866543 3346678899999999999999999876543
Q ss_pred -------CceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC-CCcEEE
Q 003978 575 -------QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-HWTVKV 646 (782)
Q Consensus 575 -------~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~-~~~vkL 646 (782)
..+|+||||+. ++|.+++.. ..+++..++.++.||+.||.|||++| |+||||||+||+++. ++.+||
T Consensus 82 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~g--ivH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 82 VGSLTELNSVYIVQEYME-TDLANVLEQ--GPLSEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred cccccccceEEEEeeccc-ccHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEcCCCceEEE
Confidence 35789999996 599888864 35889999999999999999999998 999999999999974 557899
Q ss_pred EecCCCcccccccc---cccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc--
Q 003978 647 GDFGLSRLKHETYL---TTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM-- 720 (782)
Q Consensus 647 ~DFGla~~~~~~~~---~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~-- 720 (782)
+|||++........ ......++..|+|||++.+ ..++.++|||||||++|+|++|..||...+.......+...
T Consensus 157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~ 236 (342)
T cd07854 157 GDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVP 236 (342)
T ss_pred CCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence 99999875432211 1122357889999998754 55788999999999999999999999876654433222100
Q ss_pred ---------------------ccc-----cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 721 ---------------------NQR-----LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 721 ---------------------~~~-----~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
... ..+.+.++.++.+||.+||..||.+||++.++ +.|+||+.-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~el------l~h~~~~~~ 306 (342)
T cd07854 237 VVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEA------LMHPYMSCY 306 (342)
T ss_pred CCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHH------hCCCccccc
Confidence 000 01224578899999999999999999999999 678999743
No 368
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=2.2e-35 Score=300.66 Aligned_cols=258 Identities=26% Similarity=0.384 Sum_probs=202.6
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec-CCc
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS-PQR 576 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-~~~ 576 (782)
...|++++.||+|+||.||++..+ ...+|||.++..+.....-....+|+.+++.++|||||.+..+|-. +..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 357899999999999999999653 2258999998764444445677889999999999999999999876 788
Q ss_pred eeEEEeecCCCCHHHHHhhc----CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC----CcEEEEe
Q 003978 577 LCIVTEFLPRGSLFRLLQRN----TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH----WTVKVGD 648 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~----~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~----~~vkL~D 648 (782)
+++++||.+. +|..+|.-+ ...++...+..|++||+.|+.|||++. |+||||||.||||..+ |.|||+|
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW--vlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW--VLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh--eeeccCCcceEEEeccCCccCeeEeec
Confidence 9999999976 898888543 245889999999999999999999999 9999999999999877 8999999
Q ss_pred cCCCcccccccc---cccCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCCh-------HH--HHH
Q 003978 649 FGLSRLKHETYL---TTKTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDNLNS-------MQ--VIG 715 (782)
Q Consensus 649 FGla~~~~~~~~---~~~~~~Gt~~y~aPE~l~~~~-~s~~sDIwSLG~ll~elltG~~Pf~~~~~-------~~--~~~ 715 (782)
||+++.+..+.. .....+-|..|+|||++.|.. |+.+.|||++||++.||++-.+-|.+... .+ .+.
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~ 259 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD 259 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence 999998776532 223345689999999999855 68899999999999999998877743321 11 111
Q ss_pred Hhhc-ccc-----cc---CCC--------------------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003978 716 AVGF-MNQ-----RL---EIP--------------------------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLR 760 (782)
Q Consensus 716 ~i~~-~~~-----~~---~~p--------------------------~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~ 760 (782)
+|-. +.. ++ .+| +.-++...+|+.+||..||.+|.|+.+.
T Consensus 260 rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qA----- 334 (438)
T KOG0666|consen 260 RIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQA----- 334 (438)
T ss_pred HHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHH-----
Confidence 1100 000 00 011 1124457899999999999999999998
Q ss_pred HHHHHHhhcc
Q 003978 761 DLQRQYFQAS 770 (782)
Q Consensus 761 ~L~~~~~~~~ 770 (782)
|.|+||.+-
T Consensus 335 -leh~yF~~d 343 (438)
T KOG0666|consen 335 -LEHPYFTED 343 (438)
T ss_pred -hcccccccC
Confidence 678999765
No 369
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-34 Score=295.99 Aligned_cols=249 Identities=26% Similarity=0.412 Sum_probs=213.7
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCH-HHHHHHHHHHHHHHhC-CCCceeEEeeeeec
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRL-RHPNVLLFMGAVTS 573 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~-~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~ 573 (782)
..+.....+|.++.+||+|+|.+|.+++++ .+-||+|+++++-..+ +-+.=...|..+.... +||.+|-++.+|..
T Consensus 243 ~~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqt 322 (593)
T KOG0695|consen 243 ISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQT 322 (593)
T ss_pred cccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcc
Confidence 445566789999999999999999999875 4459999998876543 3344455566666665 69999999999999
Q ss_pred CCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCc
Q 003978 574 PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 653 (782)
Q Consensus 574 ~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~ 653 (782)
+..+++|.||++||+|--++++. .+++++.+.++...|+.||.|||++| ||+||||.+||||+..|++||+|+|+++
T Consensus 323 esrlffvieyv~ggdlmfhmqrq-rklpeeharfys~ei~lal~flh~rg--iiyrdlkldnvlldaeghikltdygmck 399 (593)
T KOG0695|consen 323 ESRLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEICLALNFLHERG--IIYRDLKLDNVLLDAEGHIKLTDYGMCK 399 (593)
T ss_pred cceEEEEEEEecCcceeeehhhh-hcCcHHHhhhhhHHHHHHHHHHhhcC--eeeeeccccceEEccCCceeecccchhh
Confidence 99999999999999998888764 47999999999999999999999999 9999999999999999999999999998
Q ss_pred ccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCC-------ChHHHHHHhhccccccCC
Q 003978 654 LKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNL-------NSMQVIGAVGFMNQRLEI 726 (782)
Q Consensus 654 ~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~-------~~~~~~~~i~~~~~~~~~ 726 (782)
..-.+...+.+++|||.|.|||++.|..|+..+|+|+||++|+||+.|+.||.-. +....+.++ .....+.+
T Consensus 400 e~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqv-ilekqiri 478 (593)
T KOG0695|consen 400 EGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQV-ILEKQIRI 478 (593)
T ss_pred cCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHH-Hhhhcccc
Confidence 7777777888999999999999999999999999999999999999999999521 222333333 24556788
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCCC
Q 003978 727 PKDVDPRWAAIVESCWHSDPQCRP 750 (782)
Q Consensus 727 p~~~~~~l~~LI~~cL~~dP~~RP 750 (782)
|..++-....+++.-|.+||.+|.
T Consensus 479 prslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 479 PRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred cceeehhhHHHHHHhhcCCcHHhc
Confidence 999999999999999999999984
No 370
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-34 Score=326.13 Aligned_cols=253 Identities=31% Similarity=0.500 Sum_probs=216.8
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeee-----cCCc
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVT-----SPQR 576 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~-----~~~~ 576 (782)
.-|++.+.||.|.+|.||+++. .++..|+|++......+ .++..|..+|+.+ .|||++.+|++|. .++.
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d---eEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~Dq 95 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEE---EEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQ 95 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcccc---HHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCe
Confidence 4688999999999999999975 67889999987655433 4556788899888 5999999999985 3467
Q ss_pred eeEEEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
+|||||||.||++-|+++.. +..+.|..+..|++.++.||.+||.+. ++|||||-.|||++.++.|||+|||.+...
T Consensus 96 LWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk--viHRDikG~NiLLT~e~~VKLvDFGvSaQl 173 (953)
T KOG0587|consen 96 LWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK--VIHRDIKGQNVLLTENAEVKLVDFGVSAQL 173 (953)
T ss_pred EEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc--eeeecccCceEEEeccCcEEEeeeeeeeee
Confidence 99999999999999999643 567899999999999999999999988 999999999999999999999999999888
Q ss_pred ccccccccCCCCCCcccCcccccCC-----CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-ccCCCCC
Q 003978 656 HETYLTTKTGKGTPQWMAPEVLRNE-----PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-RLEIPKD 729 (782)
Q Consensus 656 ~~~~~~~~~~~Gt~~y~aPE~l~~~-----~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~-~~~~p~~ 729 (782)
...-....+.+|||.|||||++... .|+.++|+||||++..||--|.+|+..+.+...+..|..... .+..|+.
T Consensus 174 dsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~k 253 (953)
T KOG0587|consen 174 DSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKK 253 (953)
T ss_pred ecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccchhh
Confidence 7777777788999999999998643 356789999999999999999999999988887766643322 2334677
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003978 730 VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 768 (782)
Q Consensus 730 ~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~ 768 (782)
++.++.+||..||.+|.++||++.++ |.|+|.+
T Consensus 254 Ws~~FndFIs~cL~Kd~e~RP~~~~l------l~hpFi~ 286 (953)
T KOG0587|consen 254 WSKKFNDFISTCLVKDYEQRPSTEEL------LKHPFIT 286 (953)
T ss_pred HHHHHHHHHHHHHhhccccCcchhhh------ccCCccc
Confidence 89999999999999999999999999 4556655
No 371
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.2e-33 Score=300.98 Aligned_cols=245 Identities=25% Similarity=0.374 Sum_probs=197.3
Q ss_pred eeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCceeEEEee
Q 003978 507 LTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 507 y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
|++.+.||+|+||.||+|.. .++.|+||.+.......+ .....+|+..++.++ ||||+++++++..++..|+||||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 79 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWE-ECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEY 79 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchh-HHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEec
Confidence 67889999999999999998 467799999865433222 223456899999998 99999999999999999999999
Q ss_pred cCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 584 LPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 584 ~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
+ +++|.+++.... ..+++..++.++.|++.+|.|||+++ ++|+||||+||+++.++.++|+|||++........ .
T Consensus 80 ~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~--i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~-~ 155 (283)
T cd07830 80 M-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG--FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP-Y 155 (283)
T ss_pred C-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEEcCCCCEEEeecccceeccCCCC-c
Confidence 9 789999887643 46899999999999999999999998 99999999999999999999999999875543221 2
Q ss_pred cCCCCCCcccCccccc-CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc------------------
Q 003978 663 KTGKGTPQWMAPEVLR-NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR------------------ 723 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~-~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~------------------ 723 (782)
....++..|+|||++. +..++.++|+||||+++|+|++|..||...........+......
T Consensus 156 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd07830 156 TDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGF 235 (283)
T ss_pred CCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccc
Confidence 2346789999999885 445788999999999999999999999776554433222111000
Q ss_pred ----------cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHH
Q 003978 724 ----------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELV 756 (782)
Q Consensus 724 ----------~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell 756 (782)
....+..+..+.+||.+||..+|.+||++.+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~ 278 (283)
T cd07830 236 RFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQAL 278 (283)
T ss_pred cccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHh
Confidence 001122368899999999999999999999994
No 372
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=323.05 Aligned_cols=255 Identities=24% Similarity=0.401 Sum_probs=204.6
Q ss_pred eeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC------cee
Q 003978 507 LTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ------RLC 578 (782)
Q Consensus 507 y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------~~~ 578 (782)
|...+.||+|+||.||++++ .|+.||||.++.... ..-.+...+|+++|++++|||||+++++-+... ...
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~-~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESS-LRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcc-cchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 45567899999999999986 688899999976542 233567789999999999999999999876554 457
Q ss_pred EEEeecCCCCHHHHHhh--cCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc--CCCc--EEEEecCCC
Q 003978 579 IVTEFLPRGSLFRLLQR--NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD--KHWT--VKVGDFGLS 652 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~--~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~--~~~~--vkL~DFGla 652 (782)
++||||.||+|+..|.+ +...+++...+.++.+++.||.|||++| ||||||||.||++- .+|+ .||+|||+|
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~--IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG--IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 99999999999999975 3456999999999999999999999999 99999999999984 3344 799999999
Q ss_pred cccccccccccCCCCCCcccCccccc-CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH----HHHHhhcc-------
Q 003978 653 RLKHETYLTTKTGKGTPQWMAPEVLR-NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ----VIGAVGFM------- 720 (782)
Q Consensus 653 ~~~~~~~~~~~~~~Gt~~y~aPE~l~-~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~----~~~~i~~~------- 720 (782)
+-..+.. ...+.+||+.|++||++. ...|+..+|.||+||++|++.||.+||....... ....+...
T Consensus 172 rel~d~s-~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i 250 (732)
T KOG4250|consen 172 RELDDNS-LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAI 250 (732)
T ss_pred ccCCCCC-eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeE
Confidence 9777655 455779999999999998 4888999999999999999999999997654432 22222111
Q ss_pred ------cc------ccCCCCCCCHHH----HHHHHHhhhhCCCCCC--CHHHHHHHHHHHHHH
Q 003978 721 ------NQ------RLEIPKDVDPRW----AAIVESCWHSDPQCRP--SFQELVDKLRDLQRQ 765 (782)
Q Consensus 721 ------~~------~~~~p~~~~~~l----~~LI~~cL~~dP~~RP--s~~ell~~L~~L~~~ 765 (782)
+. .+++|-.+++.+ -..+..+|..+|.+|. .+.++...+..+.+.
T Consensus 251 ~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~ 313 (732)
T KOG4250|consen 251 GAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNL 313 (732)
T ss_pred eeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhh
Confidence 11 122334455544 4467778899999999 888888888887653
No 373
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=296.00 Aligned_cols=250 Identities=25% Similarity=0.384 Sum_probs=205.1
Q ss_pred eeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCceeEEEeecCCC
Q 003978 511 EQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLCIVTEFLPRG 587 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lv~E~~~gg 587 (782)
+.||+|+|+.|-.+.. ++..||||++.+.. .....++.+|++++.+.+ |+||++++++|+++..+|||||.|.||
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~--gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GG 161 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP--GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGG 161 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCC--chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCc
Confidence 5799999999998875 78889999998764 345678889999999995 999999999999999999999999999
Q ss_pred CHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC---CcEEEEecCCCcccccc------
Q 003978 588 SLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH---WTVKVGDFGLSRLKHET------ 658 (782)
Q Consensus 588 sL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~---~~vkL~DFGla~~~~~~------ 658 (782)
.|..+|.+.. .|++..+..+.++|+.||.|||.+| |.||||||+|||...- ..||||||.+..-....
T Consensus 162 plLshI~~~~-~F~E~EAs~vvkdia~aLdFlH~kg--IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spa 238 (463)
T KOG0607|consen 162 PLLSHIQKRK-HFNEREASRVVKDIASALDFLHTKG--IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPA 238 (463)
T ss_pred hHHHHHHHhh-hccHHHHHHHHHHHHHHHHHHhhcC--cccccCCccceeecCCCCcCceeeeccccccccccCCCCCCC
Confidence 9999998754 6999999999999999999999999 9999999999999643 46999999987532211
Q ss_pred -cccccCCCCCCcccCccccc-----CCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh---------------HHHHHHh
Q 003978 659 -YLTTKTGKGTPQWMAPEVLR-----NEPSDEKSDVYSFGVILWELATEKIPWDNLNS---------------MQVIGAV 717 (782)
Q Consensus 659 -~~~~~~~~Gt~~y~aPE~l~-----~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~---------------~~~~~~i 717 (782)
.....+.+|+..|||||+.. ...|+.+-|.||||++||-||.|.+||.+... ...++.|
T Consensus 239 stP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesI 318 (463)
T KOG0607|consen 239 STPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESI 318 (463)
T ss_pred CCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHH
Confidence 11223557999999999863 34578899999999999999999999976532 1222233
Q ss_pred hccccccCCCC----CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 718 GFMNQRLEIPK----DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 718 ~~~~~~~~~p~----~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
+ ...+++|. .++.+.++||..+|.+|+.+|.++.++ +.|+|++-...+
T Consensus 319 Q--EGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~v------lnhPw~~~~~~e 370 (463)
T KOG0607|consen 319 Q--EGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQV------LNHPWVQRCAPE 370 (463)
T ss_pred h--ccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhc------cCCccccccchh
Confidence 2 23456664 478999999999999999999999998 677888655443
No 374
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-35 Score=294.17 Aligned_cols=255 Identities=27% Similarity=0.389 Sum_probs=202.1
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHH-HHHhCCCCceeEEeeeeecCC
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVS-LMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~-il~~l~HpnIv~l~~~~~~~~ 575 (782)
.++...++++-+..||.|+||+|+|..++ |+..|||.++.... +...+++..|.+ +++.-+.||||++||+...++
T Consensus 58 ~~~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EG 136 (361)
T KOG1006|consen 58 LHTFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEG 136 (361)
T ss_pred ccccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCC
Confidence 44455567777889999999999999984 66789999987665 333456666776 455557999999999999999
Q ss_pred ceeEEEeecCCCCHHHHHh----hcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCC
Q 003978 576 RLCIVTEFLPRGSLFRLLQ----RNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGL 651 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~----~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGl 651 (782)
-.||.||+| ..+|..+.+ .....+++..+-.|..-.+.||.||-.. ..||||||||+|||++..|.|||||||+
T Consensus 137 dcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~-lkiIHRDvKPSNILldr~G~vKLCDFGI 214 (361)
T KOG1006|consen 137 DCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE-LKIIHRDVKPSNILLDRHGDVKLCDFGI 214 (361)
T ss_pred ceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH-hhhhhccCChhheEEecCCCEeeecccc
Confidence 999999999 457755543 2345689999999999999999999864 3499999999999999999999999999
Q ss_pred CcccccccccccCCCCCCcccCcccccC--CCCCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhhcccc-ccCCC
Q 003978 652 SRLKHETYLTTKTGKGTPQWMAPEVLRN--EPSDEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAVGFMNQ-RLEIP 727 (782)
Q Consensus 652 a~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~-~~~~~i~~~~~-~~~~p 727 (782)
+....+....+ ...|-..|||||.+.. ..|+.++|+||||++|||+.||+.||+..+.. +.+..+..... .+..+
T Consensus 215 cGqLv~SiAkT-~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~ 293 (361)
T KOG1006|consen 215 CGQLVDSIAKT-VDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFD 293 (361)
T ss_pred hHhHHHHHHhh-hccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCc
Confidence 87766655444 4478889999999964 45889999999999999999999999887652 22223322211 12222
Q ss_pred C---CCCHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003978 728 K---DVDPRWAAIVESCWHSDPQCRPSFQELVD 757 (782)
Q Consensus 728 ~---~~~~~l~~LI~~cL~~dP~~RPs~~ell~ 757 (782)
. .++..+..||..||.+|-..||.+.+|++
T Consensus 294 ~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 294 KECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred ccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 2 37889999999999999999999999954
No 375
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-35 Score=307.48 Aligned_cols=260 Identities=24% Similarity=0.365 Sum_probs=211.0
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-----CHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-----SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS 573 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-----~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~ 573 (782)
..+.++|-++.+||+|+|+.||++.+ ..+.||||+-...+. .....+-..+|.+|-+.|+||.||++|++|.-
T Consensus 459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl 538 (775)
T KOG1151|consen 459 PTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL 538 (775)
T ss_pred cchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee
Confidence 34556899999999999999999986 567799998654332 12344567889999999999999999999964
Q ss_pred -CCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc---CCCcEEEEec
Q 003978 574 -PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD---KHWTVKVGDF 649 (782)
Q Consensus 574 -~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~---~~~~vkL~DF 649 (782)
.+.+|-|+|||+|.+|.-+|+.+. .+++..+..|+.||+.||.||.+..++|||-||||.|||+- ..|.|||+||
T Consensus 539 DtdsFCTVLEYceGNDLDFYLKQhk-lmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDF 617 (775)
T KOG1151|consen 539 DTDSFCTVLEYCEGNDLDFYLKQHK-LMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDF 617 (775)
T ss_pred ccccceeeeeecCCCchhHHHHhhh-hhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeec
Confidence 467899999999999999998754 68999999999999999999999999999999999999995 4588999999
Q ss_pred CCCccccccccc-------ccCCCCCCcccCcccccC----CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH-h
Q 003978 650 GLSRLKHETYLT-------TKTGKGTPQWMAPEVLRN----EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGA-V 717 (782)
Q Consensus 650 Gla~~~~~~~~~-------~~~~~Gt~~y~aPE~l~~----~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~-i 717 (782)
|+++.+.+.... +.-+.||.+|++||++.- ...+.|+||||+||++|.++.|+.||...-..+.+-. -
T Consensus 618 GLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeN 697 (775)
T KOG1151|consen 618 GLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQEN 697 (775)
T ss_pred chhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhh
Confidence 999987654332 334579999999999853 3358899999999999999999999986654433222 1
Q ss_pred hcccc---ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 718 GFMNQ---RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 718 ~~~~~---~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
..+.. .++.-+.++.+.+.||++||.+..++|.++.+| ..++||
T Consensus 698 TIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qL------A~dpyl 744 (775)
T KOG1151|consen 698 TILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQL------ACDPYL 744 (775)
T ss_pred chhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHH------ccCccc
Confidence 11111 233335789999999999999999999999988 456776
No 376
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-34 Score=290.67 Aligned_cols=251 Identities=27% Similarity=0.406 Sum_probs=205.2
Q ss_pred cccceeEe-eeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeec----C
Q 003978 503 LWEDLTIG-EQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTS----P 574 (782)
Q Consensus 503 ~~~~y~i~-~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~----~ 574 (782)
..++|.+. ++||-|-.|+|-.|.+ +++++|+|++... ...++|+++--.. .|||||+++++|+. .
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~r 131 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-------PKARREVELHWMASGHPHIVSIIDVYENSYQGR 131 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCc
Confidence 34567665 5689999999999987 5778999997542 3567788876555 59999999999864 2
Q ss_pred CceeEEEeecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC---CCcEEEEecC
Q 003978 575 QRLCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK---HWTVKVGDFG 650 (782)
Q Consensus 575 ~~~~lv~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~---~~~vkL~DFG 650 (782)
..+.+|||.|+||.|+..++..+ ..|++..+..|+.||+.|+.|||+.+ |.||||||+|+|... +..+||+|||
T Consensus 132 kcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n--IAHRDlKpENLLyt~t~~na~lKLtDfG 209 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN--IAHRDLKPENLLYTTTSPNAPLKLTDFG 209 (400)
T ss_pred eeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc--hhhccCChhheeeecCCCCcceEecccc
Confidence 45779999999999999997654 45999999999999999999999999 999999999999964 5679999999
Q ss_pred CCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH----HHHHHhhccccccCC
Q 003978 651 LSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM----QVIGAVGFMNQRLEI 726 (782)
Q Consensus 651 la~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~----~~~~~i~~~~~~~~~ 726 (782)
+|+..... ....+.+-||.|.|||++..+.|+..-|+|||||+||-||+|.+||...... ....+| ....+.+
T Consensus 210 FAK~t~~~-~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI--~~gqy~F 286 (400)
T KOG0604|consen 210 FAKETQEP-GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRI--RTGQYEF 286 (400)
T ss_pred cccccCCC-ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHh--hccCccC
Confidence 99865543 3445678899999999999999999999999999999999999999766432 222333 2333444
Q ss_pred CC----CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 727 PK----DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 727 p~----~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
|. .++...+++|+.+|..+|++|.|+.++ +.|+|....+
T Consensus 287 P~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~------m~hpwi~~~~ 329 (400)
T KOG0604|consen 287 PEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEV------MDHPWINQYE 329 (400)
T ss_pred CChhHhHHHHHHHHHHHHHhcCCchhheeHHHh------hcCchhcccc
Confidence 42 478899999999999999999999999 6778875543
No 377
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-33 Score=314.30 Aligned_cols=242 Identities=24% Similarity=0.348 Sum_probs=203.5
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCceeE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~l 579 (782)
..+.|++...+|.|+|+.|-.+.+ +++..++|++.+... ...+|+.++... .||||+++.+.+.+..+.|+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~------~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~ 393 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD------DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYL 393 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccccc------ccccccchhhhhcCCCcceeecceecCCceeee
Confidence 456888999999999999999987 566799999987632 223466555444 79999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE-cCCCcEEEEecCCCcccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV-DKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl-~~~~~vkL~DFGla~~~~~~ 658 (782)
|||++.|+.|.+.+.... .....+..|+.+|+.|+.|||.+| ||||||||+|||+ +..++++|+|||.++.....
T Consensus 394 v~e~l~g~ell~ri~~~~--~~~~e~~~w~~~lv~Av~~LH~~g--vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 394 VMELLDGGELLRRIRSKP--EFCSEASQWAAELVSAVDYLHEQG--VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred eehhccccHHHHHHHhcc--hhHHHHHHHHHHHHHHHHHHHhcC--eeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 999999998888876543 222677789999999999999988 9999999999999 68899999999999866554
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhhccccccCCCCCCCHHHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAVGFMNQRLEIPKDVDPRWAAI 737 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~~l~~L 737 (782)
..+.+-|..|.|||++....|+.+.||||||++||+||+|..||...... +....+ ..+++...+|.++++|
T Consensus 470 ---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i----~~~~~s~~vS~~AKdL 542 (612)
T KOG0603|consen 470 ---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRI----QMPKFSECVSDEAKDL 542 (612)
T ss_pred ---hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhh----cCCccccccCHHHHHH
Confidence 23445688999999999999999999999999999999999999887766 332222 3444558899999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 738 VESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 738 I~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
|.+||+.||.+||++.++ ..|+||
T Consensus 543 l~~LL~~dP~~Rl~~~~i------~~h~w~ 566 (612)
T KOG0603|consen 543 LQQLLQVDPALRLGADEI------GAHPWF 566 (612)
T ss_pred HHHhccCChhhCcChhhh------ccCcch
Confidence 999999999999999999 567888
No 378
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=9e-34 Score=330.81 Aligned_cols=244 Identities=30% Similarity=0.511 Sum_probs=191.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeee----------
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAV---------- 571 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~---------- 571 (782)
..+|+.++.||+|+||.||+|+. .|+.||||.+.... .......+.+|+.+|.+|+|||||++|..|
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ 556 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL 556 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence 45788889999999999999987 68999999998766 677788899999999999999999998331
Q ss_pred --------------------------------------------------e------c----------------------
Q 003978 572 --------------------------------------------------T------S---------------------- 573 (782)
Q Consensus 572 --------------------------------------------------~------~---------------------- 573 (782)
. .
T Consensus 557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~ 636 (1351)
T KOG1035|consen 557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS 636 (1351)
T ss_pred cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence 0 0
Q ss_pred -------------------------------CCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcC
Q 003978 574 -------------------------------PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC 622 (782)
Q Consensus 574 -------------------------------~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~ 622 (782)
...+||-||||+..+|.+++.++...-.....|.++++|+.||.|+|+.
T Consensus 637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~ 716 (1351)
T KOG1035|consen 637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQ 716 (1351)
T ss_pred CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhC
Confidence 0126899999998888888876542224678899999999999999999
Q ss_pred CCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc------c------------ccccccCCCCCCcccCcccccCCC---
Q 003978 623 NPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH------E------------TYLTTKTGKGTPQWMAPEVLRNEP--- 681 (782)
Q Consensus 623 ~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~------~------------~~~~~~~~~Gt~~y~aPE~l~~~~--- 681 (782)
| ||||||||.||+++.++.|||+|||+|+... + ........+||.-|+|||++.+..
T Consensus 717 g--iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~ 794 (1351)
T KOG1035|consen 717 G--IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNK 794 (1351)
T ss_pred c--eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccccc
Confidence 9 9999999999999999999999999997511 0 011223457999999999998755
Q ss_pred CCchhHHHHHHHHHHHHHcCCCCCC-CCChHHHHHHhhccccccCCCCC---C---CHHHHHHHHHhhhhCCCCCCCHHH
Q 003978 682 SDEKSDVYSFGVILWELATEKIPWD-NLNSMQVIGAVGFMNQRLEIPKD---V---DPRWAAIVESCWHSDPQCRPSFQE 754 (782)
Q Consensus 682 ~s~~sDIwSLG~ll~elltG~~Pf~-~~~~~~~~~~i~~~~~~~~~p~~---~---~~~l~~LI~~cL~~dP~~RPs~~e 754 (782)
|+.|+|||||||+|+||+. ||. .+.....+..+. ...+|.. . -+.-+.+|.+||+.||.+|||+.+
T Consensus 795 Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR----~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~e 867 (1351)
T KOG1035|consen 795 YNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLR----KGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATE 867 (1351)
T ss_pred ccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcc----cCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHH
Confidence 8999999999999999984 453 223333333332 2222222 2 234578999999999999999999
Q ss_pred HHH
Q 003978 755 LVD 757 (782)
Q Consensus 755 ll~ 757 (782)
||+
T Consensus 868 LL~ 870 (1351)
T KOG1035|consen 868 LLN 870 (1351)
T ss_pred Hhh
Confidence 964
No 379
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=4.5e-33 Score=289.96 Aligned_cols=227 Identities=19% Similarity=0.238 Sum_probs=186.4
Q ss_pred CCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCCCCHHHHH
Q 003978 516 GSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLL 593 (782)
Q Consensus 516 G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ggsL~~~l 593 (782)
|.||.||++.+ .++.||+|.++... ...+|...+....||||+++++++......|++|||+++++|.+++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 76 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHI 76 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHH
Confidence 89999999987 56779999986543 1223445555567999999999999999999999999999999999
Q ss_pred hhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCCCCCcccC
Q 003978 594 QRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMA 673 (782)
Q Consensus 594 ~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~a 673 (782)
.... .+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||.+....... ....++..|+|
T Consensus 77 ~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~---~~~~~~~~y~a 150 (237)
T cd05576 77 SKFL-NIPEECVKRWAAEMVVALDALHREG--IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC---DGEAVENMYCA 150 (237)
T ss_pred HHhc-CCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEEcCCCCEEEecccchhcccccc---ccCCcCccccC
Confidence 7643 5899999999999999999999998 9999999999999999999999999876544321 23356778999
Q ss_pred cccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCH-
Q 003978 674 PEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSF- 752 (782)
Q Consensus 674 PE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~- 752 (782)
||.+.+..++.++||||+||++|+|++|..||...... + .......+|..+++.+++||.+||+.||.+||++
T Consensus 151 PE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 151 PEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-----I-NTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred CcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----c-ccccccCCcccCCHHHHHHHHHHccCCHHHhcCCC
Confidence 99998888899999999999999999999887643221 1 0112345677889999999999999999999985
Q ss_pred ----HHHHHHHHHHHHHHh
Q 003978 753 ----QELVDKLRDLQRQYF 767 (782)
Q Consensus 753 ----~ell~~L~~L~~~~~ 767 (782)
.++ +.|+||
T Consensus 225 ~~~~~~~------~~h~~~ 237 (237)
T cd05576 225 VAGVEDI------KSHPFF 237 (237)
T ss_pred ccchHHH------HcCCCC
Confidence 666 455664
No 380
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-32 Score=322.16 Aligned_cols=262 Identities=32% Similarity=0.611 Sum_probs=225.8
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEc---------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEe
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWY---------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFM 568 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~---------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~ 568 (782)
.|++..++.++.+.||+|.||.|+++... ...||||.++..... ...+.+..|+++|+.+ +|+|||.++
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~ll 368 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLL 368 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhhe
Confidence 67888888899999999999999999753 235899998766554 6678899999999999 599999999
Q ss_pred eeeecCCceeEEEeecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 003978 569 GAVTSPQRLCIVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKS 633 (782)
Q Consensus 569 ~~~~~~~~~~lv~E~~~ggsL~~~l~~~~---------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp 633 (782)
+++...+.+++|+|||..|+|..++..++ ..++....+.++.||+.||+||++.. +|||||-.
T Consensus 369 G~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~--~vHRDLAa 446 (609)
T KOG0200|consen 369 GACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP--CVHRDLAA 446 (609)
T ss_pred eeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC--ccchhhhh
Confidence 99999999999999999999999998766 34888999999999999999999987 99999999
Q ss_pred CcEEEcCCCcEEEEecCCCccccc-ccccccCCCC--CCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCC
Q 003978 634 SNLLVDKHWTVKVGDFGLSRLKHE-TYLTTKTGKG--TPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLN 709 (782)
Q Consensus 634 ~NILl~~~~~vkL~DFGla~~~~~-~~~~~~~~~G--t~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~ 709 (782)
.||||+++..+||+|||+++.... .+.......| ...|||||.+....++.++||||+|++||||++ |..||.+..
T Consensus 447 RNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~ 526 (609)
T KOG0200|consen 447 RNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP 526 (609)
T ss_pred hhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC
Confidence 999999999999999999985433 2222222233 446999999999999999999999999999999 899999866
Q ss_pred -hHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 710 -SMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 710 -~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
...... ....+.++..|..+++++.++++.||+.+|++||++.++.+.|..+..
T Consensus 527 ~~~~l~~-~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 527 PTEELLE-FLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred cHHHHHH-HHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 444433 444666889999999999999999999999999999999999999654
No 381
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.7e-33 Score=307.79 Aligned_cols=257 Identities=20% Similarity=0.318 Sum_probs=207.3
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
...|..++.||-|+||.|.++... ...||+|.+.+... ....+.-.+.|-.||...+.+-||+||..|.+.+.+|+|
T Consensus 628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFV 707 (1034)
T KOG0608|consen 628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV 707 (1034)
T ss_pred ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEE
Confidence 346889999999999999999764 44599999876543 445566778899999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCc---cccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR---LKHE 657 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~---~~~~ 657 (782)
|+|++||++-.+|.+.+ .|++..+.+++.+|..|+++.|..| +|||||||+|||||.+|+|||+|||++. +.++
T Consensus 708 MdYIPGGDmMSLLIrmg-IFeE~LARFYIAEltcAiesVHkmG--FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHd 784 (1034)
T KOG0608|consen 708 MDYIPGGDMMSLLIRMG-IFEEDLARFYIAELTCAIESVHKMG--FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 784 (1034)
T ss_pred EeccCCccHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHHHhcc--ceecccCccceEEccCCceeeeeccccccceeccc
Confidence 99999999999987654 6999999999999999999999999 9999999999999999999999999974 1111
Q ss_pred c---------------------------------------cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHH
Q 003978 658 T---------------------------------------YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWEL 698 (782)
Q Consensus 658 ~---------------------------------------~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~el 698 (782)
. -......+||+.|+|||++....|+.--|+||.||+||||
T Consensus 785 skYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em 864 (1034)
T KOG0608|consen 785 SKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEM 864 (1034)
T ss_pred cccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHH
Confidence 0 0001133699999999999999999999999999999999
Q ss_pred HcCCCCCCCCChHHHHHHhhccccccCC--CCCCCHHHHHHHHHhhhhCCCCCC---CHHHHHHHHHHHHHHHhhcc
Q 003978 699 ATEKIPWDNLNSMQVIGAVGFMNQRLEI--PKDVDPRWAAIVESCWHSDPQCRP---SFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 699 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~--p~~~~~~l~~LI~~cL~~dP~~RP---s~~ell~~L~~L~~~~~~~~ 770 (782)
+.|..||......+...++..-...+.+ ..++++++.+||.++.. +++.|. .+++| -.|+||+.+
T Consensus 865 ~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~v------KaHpfFkgI 934 (1034)
T KOG0608|consen 865 LVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQV------KAHPFFKGI 934 (1034)
T ss_pred hhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-Chhhhhcccchhhh------hcCcccccc
Confidence 9999999887776655444322222333 35799999999998554 567775 34444 246777554
No 382
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.6e-35 Score=289.10 Aligned_cols=264 Identities=21% Similarity=0.296 Sum_probs=210.1
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC-----
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP----- 574 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~----- 574 (782)
.....|+-..+||+|.||.||+++. .++.||+|++-.+......-....+|+++|..++|+|++.++++|...
T Consensus 14 ~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~ 93 (376)
T KOG0669|consen 14 DEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTN 93 (376)
T ss_pred ecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcc
Confidence 4446778888999999999999987 456788887644333333334567899999999999999999887432
Q ss_pred ---CceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCC
Q 003978 575 ---QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGL 651 (782)
Q Consensus 575 ---~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGl 651 (782)
..+|+||.+|+. +|..+|.....+++...+..++.+++.||.|+|+.. |+|||+||+|+||+.+|.+||+|||+
T Consensus 94 r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k--ilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 94 RDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNK--ILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred cccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhh--HHhhcccHhhEEEcCCceEEeecccc
Confidence 348999999966 999999877788999999999999999999999998 99999999999999999999999999
Q ss_pred Ccccccc----cccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc---
Q 003978 652 SRLKHET----YLTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR--- 723 (782)
Q Consensus 652 a~~~~~~----~~~~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~--- 723 (782)
++..... .......+-|..|++||.+.|. .|+.+.|||.-||+|.||+++.+-+.+....+.+..|...-+.
T Consensus 171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tk 250 (376)
T KOG0669|consen 171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITK 250 (376)
T ss_pred ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCc
Confidence 9754322 1112244569999999999875 4788999999999999999999999988887766654321110
Q ss_pred --------------c---CCC-------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 724 --------------L---EIP-------------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 724 --------------~---~~p-------------~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
+ +++ -.-+++..+|+.++|..||.+|++++++ +.|.||..-+.+
T Consensus 251 evWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~a------lnh~~F~kdp~p 324 (376)
T KOG0669|consen 251 EVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQA------LNHDFFWKDPMP 324 (376)
T ss_pred ccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhh------hchhhhhcCCcc
Confidence 0 011 1124578899999999999999999999 667888766554
Q ss_pred C
Q 003978 774 V 774 (782)
Q Consensus 774 ~ 774 (782)
.
T Consensus 325 q 325 (376)
T KOG0669|consen 325 Q 325 (376)
T ss_pred h
Confidence 3
No 383
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-32 Score=288.56 Aligned_cols=260 Identities=33% Similarity=0.596 Sum_probs=206.5
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC--CCCceeEEeeeeecCC
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL--RHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l--~HpnIv~l~~~~~~~~ 575 (782)
+.......+..+.+.||+|.||.||+|.+.|..||||+|.... .....+|.+|++.+ +|+||+.|++.-..++
T Consensus 204 LVQRTiarqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srd-----E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~ 278 (513)
T KOG2052|consen 204 LVQRTIARQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRD-----ERSWFRETEIYQTVMLRHENILGFIAADNKDN 278 (513)
T ss_pred HhHHhhhheeEEEEEecCccccceeeccccCCceEEEEecccc-----hhhhhhHHHHHHHHHhccchhhhhhhccccCC
Confidence 3445566789999999999999999999999999999996533 25678899998875 8999999999876543
Q ss_pred ----ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhc-----C-CCCeeecCCCCCcEEEcCCCcEE
Q 003978 576 ----RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHH-----C-NPPIIHRDLKSSNLLVDKHWTVK 645 (782)
Q Consensus 576 ----~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~-----~-~~~ivHrDIKp~NILl~~~~~vk 645 (782)
.+|||.+|-+.|||+|||.+ ..++....++++..++.||++||. + .+.|.|||||..||||.+++...
T Consensus 279 gs~TQLwLvTdYHe~GSL~DyL~r--~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~ 356 (513)
T KOG2052|consen 279 GSWTQLWLVTDYHEHGSLYDYLNR--NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 356 (513)
T ss_pred CceEEEEEeeecccCCcHHHHHhh--ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEE
Confidence 58999999999999999986 458899999999999999999995 2 35699999999999999999999
Q ss_pred EEecCCCcccccc----cccccCCCCCCcccCcccccCCCC-----C-chhHHHHHHHHHHHHHc-----C-----CCCC
Q 003978 646 VGDFGLSRLKHET----YLTTKTGKGTPQWMAPEVLRNEPS-----D-EKSDVYSFGVILWELAT-----E-----KIPW 705 (782)
Q Consensus 646 L~DFGla~~~~~~----~~~~~~~~Gt~~y~aPE~l~~~~~-----s-~~sDIwSLG~ll~ellt-----G-----~~Pf 705 (782)
|+|+|+|...... .......+||.+|||||++...-. + ..+||||||.++||+.. | .+||
T Consensus 357 IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Py 436 (513)
T KOG2052|consen 357 IADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPY 436 (513)
T ss_pred EeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCc
Confidence 9999999754332 233456789999999999864321 2 35999999999999876 2 5788
Q ss_pred CCCC----hHHHHHHh-hccccccCCCCCCC--H---HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 706 DNLN----SMQVIGAV-GFMNQRLEIPKDVD--P---RWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 706 ~~~~----~~~~~~~i-~~~~~~~~~p~~~~--~---~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
...- ..+.+..+ .....++.+|..+. + .+..|++.||..||.-|.|+-.+.+.|.++.+
T Consensus 437 yd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 437 YDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred ccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 5442 22333333 33334555555432 3 45678999999999999999999999888864
No 384
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=3.4e-32 Score=291.54 Aligned_cols=256 Identities=34% Similarity=0.553 Sum_probs=206.8
Q ss_pred cceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC--CCCceeEEeeeeecCC----cee
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL--RHPNVLLFMGAVTSPQ----RLC 578 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l--~HpnIv~l~~~~~~~~----~~~ 578 (782)
...++.++||+|.||.||+|...++.||||+++.. ..+.+..|.+|+... +|+||++|+++-.... .++
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~-----~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw 284 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQ-----EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW 284 (534)
T ss_pred CchhhHHHhhcCccceeehhhccCceeEEEecCHH-----HHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence 45677889999999999999999999999998643 357788888888765 7999999999876554 789
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcC-------CCCeeecCCCCCcEEEcCCCcEEEEecCC
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC-------NPPIIHRDLKSSNLLVDKHWTVKVGDFGL 651 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~-------~~~ivHrDIKp~NILl~~~~~vkL~DFGl 651 (782)
||++|-+.|+|.++|+.+ .++|.....++.-|++||+|||+- .++|+|||||..||||.+|++..|+|||+
T Consensus 285 LVt~fh~kGsL~dyL~~n--tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL 362 (534)
T KOG3653|consen 285 LVTEFHPKGSLCDYLKAN--TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL 362 (534)
T ss_pred EEeeeccCCcHHHHHHhc--cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence 999999999999999865 589999999999999999999962 36799999999999999999999999999
Q ss_pred Ccccccc--cccccCCCCCCcccCcccccCCCC-C-----chhHHHHHHHHHHHHHcC------------CCCCC-----
Q 003978 652 SRLKHET--YLTTKTGKGTPQWMAPEVLRNEPS-D-----EKSDVYSFGVILWELATE------------KIPWD----- 706 (782)
Q Consensus 652 a~~~~~~--~~~~~~~~Gt~~y~aPE~l~~~~~-s-----~~sDIwSLG~ll~elltG------------~~Pf~----- 706 (782)
|...... .......+||.+|||||++.|.-. . .+.||||+|.|||||++. ..||.
T Consensus 363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~ 442 (534)
T KOG3653|consen 363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN 442 (534)
T ss_pred eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence 9865432 223334689999999999987432 1 368999999999999883 12343
Q ss_pred CCChHHHHHHhhccccccCCCCCC-----CHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 707 NLNSMQVIGAVGFMNQRLEIPKDV-----DPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 707 ~~~~~~~~~~i~~~~~~~~~p~~~-----~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
.....++...+.....++.+|..+ ..-+++.|..||..|++-|.|+.=+-+.+.++.+.+-
T Consensus 443 hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 443 HPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred CCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 111223333444455666666543 3468899999999999999999999999999988764
No 385
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.98 E-value=3e-31 Score=273.16 Aligned_cols=236 Identities=33% Similarity=0.505 Sum_probs=196.3
Q ss_pred CcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCCCCHHHHHh
Q 003978 517 SCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQ 594 (782)
Q Consensus 517 ~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ggsL~~~l~ 594 (782)
+||.||++... +..+++|++........ ...+.+|++.++.++|+||+++++.+......+++|||+.+++|..++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~ 79 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK 79 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence 58999999985 57899999876543322 5788899999999999999999999999899999999999989999997
Q ss_pred hcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCCCCCcccCc
Q 003978 595 RNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAP 674 (782)
Q Consensus 595 ~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aP 674 (782)
.... +++..++.++.+++.+|.|||+.+ ++|+||+|.||+++.++.++|+|||++....... ......++..|++|
T Consensus 80 ~~~~-~~~~~~~~~~~~l~~~l~~lh~~~--i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~p 155 (244)
T smart00220 80 KRGR-LSEDEARFYARQILSALEYLHSNG--IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTPEYMAP 155 (244)
T ss_pred hccC-CCHHHHHHHHHHHHHHHHHHHHcC--eecCCcCHHHeEECCCCcEEEccccceeeecccc-ccccccCCcCCCCH
Confidence 6443 888999999999999999999998 9999999999999999999999999987665432 23345688999999
Q ss_pred ccccCCCCCchhHHHHHHHHHHHHHcCCCCCCC-CChHHHHHHhhccccccCCCCC-CCHHHHHHHHHhhhhCCCCCCCH
Q 003978 675 EVLRNEPSDEKSDVYSFGVILWELATEKIPWDN-LNSMQVIGAVGFMNQRLEIPKD-VDPRWAAIVESCWHSDPQCRPSF 752 (782)
Q Consensus 675 E~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~-~~~~~~~~~i~~~~~~~~~p~~-~~~~l~~LI~~cL~~dP~~RPs~ 752 (782)
|.+.+..++.++|||+||+++|+|++|..||.. .........+............ ++.++.+++.+||..+|++||++
T Consensus 156 E~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~ 235 (244)
T smart00220 156 EVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTA 235 (244)
T ss_pred HHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCH
Confidence 999988889999999999999999999999987 3433333333211111111111 88999999999999999999999
Q ss_pred HHHHH
Q 003978 753 QELVD 757 (782)
Q Consensus 753 ~ell~ 757 (782)
.++++
T Consensus 236 ~~~~~ 240 (244)
T smart00220 236 EEALQ 240 (244)
T ss_pred HHHhh
Confidence 99954
No 386
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.97 E-value=1.4e-31 Score=333.07 Aligned_cols=247 Identities=24% Similarity=0.399 Sum_probs=191.4
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
...|...+.||+|+||.||+|.. .+..||||.+...... ...|+++++.++|||||++++++..+...|+||
T Consensus 689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~ 762 (968)
T PLN00113 689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI------PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIH 762 (968)
T ss_pred HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc------cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEE
Confidence 34567778999999999999986 5678999988643321 124688899999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcC-CCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC-NPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 660 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~-~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 660 (782)
|||++|+|.+++. .+++..+..++.|++.||+|||.. .++|+||||||+||+++.++..++. ||.......
T Consensus 763 Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~--- 834 (968)
T PLN00113 763 EYIEGKNLSEVLR----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT--- 834 (968)
T ss_pred eCCCCCcHHHHHh----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc---
Confidence 9999999999995 378899999999999999999943 2339999999999999998887775 665543221
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH--HHHHHhh--ccc------cccCCCC--
Q 003978 661 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM--QVIGAVG--FMN------QRLEIPK-- 728 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~--~~~~~i~--~~~------~~~~~p~-- 728 (782)
.....||+.|||||++.+..++.++|||||||++|||++|+.||...... ....... ... ..+.+..
T Consensus 835 -~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (968)
T PLN00113 835 -DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDV 913 (968)
T ss_pred -CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCC
Confidence 12336889999999999999999999999999999999999998532110 1111000 000 0011111
Q ss_pred ----CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003978 729 ----DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 765 (782)
Q Consensus 729 ----~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~ 765 (782)
....++.+++.+||..||++||++.++++.|+++...
T Consensus 914 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 914 SVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 1123577899999999999999999999999887653
No 387
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-31 Score=300.45 Aligned_cols=254 Identities=31% Similarity=0.561 Sum_probs=220.3
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCC----eEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGS----DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~----~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
..+..++||.|+||+||+|.+ ++. +||||++..... .+.-.++..|+-+|.+++|||++++++++.... +.|
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~-~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~ql 774 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTS-PKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQL 774 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCC-chhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHH
Confidence 345568999999999999987 333 589999865543 334567888999999999999999999998765 889
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
|++||++|.|.++++.++..+-.+..+.|..||++||.|||.++ +|||||-..||||..-.+|||.|||+++......
T Consensus 775 vtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qr--lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 775 VTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQR--LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred HHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcc--hhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 99999999999999998889999999999999999999999988 9999999999999999999999999998754432
Q ss_pred --ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHH
Q 003978 660 --LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 736 (782)
Q Consensus 660 --~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~ 736 (782)
.......-.+.|||-|.+....|+.++||||+||++||++| |..||.+....++-..+. ...++..|+.++.++..
T Consensus 853 ~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle-~geRLsqPpiCtiDVy~ 931 (1177)
T KOG1025|consen 853 KEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLE-KGERLSQPPICTIDVYM 931 (1177)
T ss_pred ccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHh-ccccCCCCCCccHHHHH
Confidence 22333445678999999999999999999999999999998 999999988776655543 55678999999999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 737 IVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 737 LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
++.+||..|+..||+++++...|.++..
T Consensus 932 ~mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 932 VMVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred HHHHHhccCcccCccHHHHHHHHHHHhc
Confidence 9999999999999999999999988754
No 388
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=8.6e-31 Score=305.15 Aligned_cols=257 Identities=19% Similarity=0.223 Sum_probs=175.1
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeee-----
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGA----- 570 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~----- 570 (782)
...++|++.++||+|+||.||+|.+. +..||||.+......+ ....+ .+....+.+++.++..
T Consensus 129 ~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e----~~~~e--~l~~~~~~~~~~~~~~~~~~~ 202 (566)
T PLN03225 129 FKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVE----IWMNE--RVRRACPNSCADFVYGFLEPV 202 (566)
T ss_pred CccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhH----HHHHH--HHHhhchhhHHHHHHhhhccc
Confidence 35679999999999999999999874 5679999875432111 11111 1122222233322222
Q ss_pred -eecCCceeEEEeecCCCCHHHHHhhcCCcc-------------------hHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 003978 571 -VTSPQRLCIVTEFLPRGSLFRLLQRNTTKL-------------------DWRRRILMALDIARGVSYLHHCNPPIIHRD 630 (782)
Q Consensus 571 -~~~~~~~~lv~E~~~ggsL~~~l~~~~~~l-------------------~~~~~~~i~~qll~aL~~LH~~~~~ivHrD 630 (782)
...+..+++||||+.+++|.+++....... ....+..++.||+.||.|||+++ |+|||
T Consensus 203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g--IiHRD 280 (566)
T PLN03225 203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG--IVHRD 280 (566)
T ss_pred ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC--EEeCc
Confidence 234567899999999999999987543221 23345678999999999999998 99999
Q ss_pred CCCCcEEEcC-CCcEEEEecCCCcccccc-cccccCCCCCCcccCcccccCCC----------------------CCchh
Q 003978 631 LKSSNLLVDK-HWTVKVGDFGLSRLKHET-YLTTKTGKGTPQWMAPEVLRNEP----------------------SDEKS 686 (782)
Q Consensus 631 IKp~NILl~~-~~~vkL~DFGla~~~~~~-~~~~~~~~Gt~~y~aPE~l~~~~----------------------~s~~s 686 (782)
|||+||||+. ++.+||+|||+|+..... ........+|+.|||||.+.... ++.++
T Consensus 281 LKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 281 VKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred CCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 9999999985 579999999999754322 12233567899999999764322 23456
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-----------c--------cCCCCCCCHHHHHHHHHhhhhCCC
Q 003978 687 DVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-----------R--------LEIPKDVDPRWAAIVESCWHSDPQ 747 (782)
Q Consensus 687 DIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~-----------~--------~~~p~~~~~~l~~LI~~cL~~dP~ 747 (782)
|||||||+||||+++..|+.... ......+..... . ..+....+....+||.+||.+||.
T Consensus 361 DVwSlGviL~el~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~ 439 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSDSNL-IQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGR 439 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCchHH-HHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcc
Confidence 99999999999999877754321 111111110000 0 001111233456899999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 748 CRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 748 ~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
+|||+.++ |+|+||+.....
T Consensus 440 kR~ta~e~------L~Hpff~~~~~~ 459 (566)
T PLN03225 440 QRISAKAA------LAHPYFDREGLL 459 (566)
T ss_pred cCCCHHHH------hCCcCcCCCCcc
Confidence 99999999 678999765543
No 389
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=8.7e-32 Score=304.63 Aligned_cols=245 Identities=29% Similarity=0.463 Sum_probs=193.7
Q ss_pred eeEeeeeccCCcEE-EEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCceeEEEeec
Q 003978 507 LTIGEQIGQGSCGT-VYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIVTEFL 584 (782)
Q Consensus 507 y~i~~~IG~G~~G~-Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lv~E~~ 584 (782)
|.-.+.+|.|+.|+ ||+|.+.++.||||.+-. +....+.+|+.+|+.- .|||||++|+.-.+....||++|+|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~-----e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYEGREVAVKRLLE-----EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeCCceehHHHHhh-----HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence 44456789999986 999999999999997643 3345678899999988 4999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCcchH---HHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC---C--CcEEEEecCCCcccc
Q 003978 585 PRGSLFRLLQRNTTKLDW---RRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK---H--WTVKVGDFGLSRLKH 656 (782)
Q Consensus 585 ~ggsL~~~l~~~~~~l~~---~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~---~--~~vkL~DFGla~~~~ 656 (782)
..+|.+++......+.. -..+.++.|++.||++||+.+ ||||||||.||||+. + ..++|+|||+++...
T Consensus 586 -~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~--iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 586 -ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK--IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred -hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc--cccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 55999999864111111 344678889999999999988 999999999999975 3 468999999998654
Q ss_pred cc---cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcC-CCCCCCCChHHHHHHhhcccc-ccCCCCCCC
Q 003978 657 ET---YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATE-KIPWDNLNSMQVIGAVGFMNQ-RLEIPKDVD 731 (782)
Q Consensus 657 ~~---~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG-~~Pf~~~~~~~~~~~i~~~~~-~~~~p~~~~ 731 (782)
.. .....+..||-.|+|||++.......++|||||||++|+.++| .+||...-..+. .|..... ...+.+..+
T Consensus 663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~--NIl~~~~~L~~L~~~~d 740 (903)
T KOG1027|consen 663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA--NILTGNYTLVHLEPLPD 740 (903)
T ss_pred CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh--hhhcCccceeeeccCch
Confidence 32 2234566799999999999998888999999999999999996 999986544332 2221121 112222333
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 732 PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 732 ~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
.++.+||.+|+..+|..||++.++ |.|++|
T Consensus 741 ~eA~dLI~~ml~~dP~~RPsa~~V------L~HPlF 770 (903)
T KOG1027|consen 741 CEAKDLISRMLNPDPQLRPSATDV------LNHPLF 770 (903)
T ss_pred HHHHHHHHHhcCCCcccCCCHHHH------hCCCcc
Confidence 389999999999999999999999 455655
No 390
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-30 Score=279.28 Aligned_cols=254 Identities=24% Similarity=0.371 Sum_probs=197.9
Q ss_pred cceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-----C---CceeEEeeeeec-
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-----H---PNVLLFMGAVTS- 573 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-----H---pnIv~l~~~~~~- 573 (782)
.+|.+.++||.|-|++||++.+. .+.||||+++.. ....+....||++|+.++ | ..||+|++.|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA---qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs 154 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA---QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS 154 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh---hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence 69999999999999999999984 566999998643 345567888999999984 3 469999999964
Q ss_pred ---CCceeEEEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc----------
Q 003978 574 ---PQRLCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD---------- 639 (782)
Q Consensus 574 ---~~~~~lv~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~---------- 639 (782)
..++|||+|++ |.+|..+|... ...++...+..|++||+.||.|||+. .+|||.||||+|||+-
T Consensus 155 GpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~e-cgIIHTDlKPENvLl~~~e~~~~~~~ 232 (590)
T KOG1290|consen 155 GPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRE-CGIIHTDLKPENVLLCSTEIDPAKDA 232 (590)
T ss_pred CCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHh-cCccccCCCcceeeeeccccchhhhh
Confidence 35799999999 77999988664 44589999999999999999999974 3499999999999983
Q ss_pred --------------------------------------------------------------------------------
Q 003978 640 -------------------------------------------------------------------------------- 639 (782)
Q Consensus 640 -------------------------------------------------------------------------------- 639 (782)
T Consensus 233 ~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~ 312 (590)
T KOG1290|consen 233 REAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRINGN 312 (590)
T ss_pred hhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCcc
Confidence
Q ss_pred ------------------------CC----------------------------------------------------Cc
Q 003978 640 ------------------------KH----------------------------------------------------WT 643 (782)
Q Consensus 640 ------------------------~~----------------------------------------------------~~ 643 (782)
+. -+
T Consensus 313 ~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di~ 392 (590)
T KOG1290|consen 313 ESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDIR 392 (590)
T ss_pred ccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCcccee
Confidence 00 03
Q ss_pred EEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh------HH----H
Q 003978 644 VKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS------MQ----V 713 (782)
Q Consensus 644 vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~------~~----~ 713 (782)
|||+|||.|++.+..+. ....|..|+|||++.|..|+..+||||++|++|||.||...|..... .. .
T Consensus 393 vKIaDlGNACW~~khFT---~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i 469 (590)
T KOG1290|consen 393 VKIADLGNACWVHKHFT---EDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALI 469 (590)
T ss_pred EEEeeccchhhhhhhhc---hhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHH
Confidence 68888888887666543 33579999999999999999999999999999999999998864432 11 1
Q ss_pred HHHhhccc---------------cc---------------------cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003978 714 IGAVGFMN---------------QR---------------------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVD 757 (782)
Q Consensus 714 ~~~i~~~~---------------~~---------------------~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~ 757 (782)
++.+..+. .+ +.++..-..++.+||.-||+.+|++|||+.++
T Consensus 470 ~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~c-- 547 (590)
T KOG1290|consen 470 MELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQC-- 547 (590)
T ss_pred HHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHH--
Confidence 11111000 00 01111122468899999999999999999999
Q ss_pred HHHHHHHHHhhcccC
Q 003978 758 KLRDLQRQYFQASRS 772 (782)
Q Consensus 758 ~L~~L~~~~~~~~~~ 772 (782)
|+|+|++...-
T Consensus 548 ----l~hPwLn~~~~ 558 (590)
T KOG1290|consen 548 ----LKHPWLNPVAG 558 (590)
T ss_pred ----hcCccccCCCC
Confidence 67899986544
No 391
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=7.6e-32 Score=264.57 Aligned_cols=254 Identities=19% Similarity=0.369 Sum_probs=203.2
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCC--cee
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQ--RLC 578 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~--~~~ 578 (782)
.++|++.+++|+|.|+.||.|.. .+++++||++++.+ .+.+++|++||+.|. ||||+.++++..++. ...
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk-----kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktpa 111 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK-----KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPS 111 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH-----HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCch
Confidence 46899999999999999999984 67889999987543 367899999999996 999999999998764 467
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC-CcEEEEecCCCccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH-WTVKVGDFGLSRLKHE 657 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~-~~vkL~DFGla~~~~~ 657 (782)
||+||++..+...+.. .++.-.+..++.+++.||.|||+.| |+|||+||.|+||+.. -.++|+|+|+|...+.
T Consensus 112 LiFE~v~n~Dfk~ly~----tl~d~dIryY~~elLkALdyCHS~G--ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp 185 (338)
T KOG0668|consen 112 LIFEYVNNTDFKQLYP----TLTDYDIRYYIYELLKALDYCHSMG--IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 185 (338)
T ss_pred hHhhhhccccHHHHhh----hhchhhHHHHHHHHHHHHhHHHhcC--cccccCCcceeeechhhceeeeeecchHhhcCC
Confidence 9999998877665553 3677788999999999999999999 9999999999999864 5699999999987765
Q ss_pred ccccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCC-CCChHHHHHHhhcccc-----------cc
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWD-NLNSMQVIGAVGFMNQ-----------RL 724 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~-~~~~~~~~~~i~~~~~-----------~~ 724 (782)
.. .....+.+..|.-||++..- .|++.-|+|||||+|..|++.+-||- +.+..+.+..+....+ .+
T Consensus 186 ~~-eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i 264 (338)
T KOG0668|consen 186 GK-EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQI 264 (338)
T ss_pred Cc-eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHcc
Confidence 43 33455678899999998764 47899999999999999999988873 3333333323221100 01
Q ss_pred CCC------------------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcCC
Q 003978 725 EIP------------------------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVG 775 (782)
Q Consensus 725 ~~p------------------------~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~~ 775 (782)
.++ ...++++.+|+.++|..|-.+|+|+.|. +.|+||...+....
T Consensus 265 ~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEa------m~HpyF~~~~~~~~ 333 (338)
T KOG0668|consen 265 DLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEA------MAHPYFAPVREAES 333 (338)
T ss_pred CCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHH------hcCchHHHHHHHhh
Confidence 111 1246899999999999999999999998 78999987765443
No 392
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.97 E-value=6.9e-32 Score=290.31 Aligned_cols=255 Identities=23% Similarity=0.350 Sum_probs=207.1
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC------CCceeEEeeeee
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR------HPNVLLFMGAVT 572 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~------HpnIv~l~~~~~ 572 (782)
|.+-.+|.+....|+|-|+.|..|.+ .+..||||++....... +.=..|++||++|. --++++|+-.|.
T Consensus 428 E~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~---KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~ 504 (752)
T KOG0670|consen 428 ELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMH---KTGLKELEILKKLNDADPEDKFHCLRLFRHFK 504 (752)
T ss_pred hhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHh---hhhhHHHHHHHHhhccCchhhhHHHHHHHHhh
Confidence 55667999999999999999999987 46689999998755422 34457999999995 247999999999
Q ss_pred cCCceeEEEeecCCCCHHHHHhhcCC--cchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC-CcEEEEec
Q 003978 573 SPQRLCIVTEFLPRGSLFRLLQRNTT--KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH-WTVKVGDF 649 (782)
Q Consensus 573 ~~~~~~lv~E~~~ggsL~~~l~~~~~--~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~-~~vkL~DF 649 (782)
..+++|||||-+ ..+|.++|++.+. .|....+..++.||+.||..|-.+| |+|.||||+||||+.. ..+|||||
T Consensus 505 hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~--vlHaDIKPDNiLVNE~k~iLKLCDf 581 (752)
T KOG0670|consen 505 HKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG--VLHADIKPDNILVNESKNILKLCDF 581 (752)
T ss_pred hcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC--eeecccCccceEeccCcceeeeccC
Confidence 999999999999 6799999987543 3677889999999999999999999 9999999999999865 46899999
Q ss_pred CCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccC----
Q 003978 650 GLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE---- 725 (782)
Q Consensus 650 Gla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~---- 725 (782)
|.|....+...+.. .-+..|.|||++.|.+|++..|+||+||+||||+||+.-|.+....+++....-+.+.++
T Consensus 582 GSA~~~~eneitPY--LVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~Kml 659 (752)
T KOG0670|consen 582 GSASFASENEITPY--LVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKML 659 (752)
T ss_pred ccccccccccccHH--HHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHh
Confidence 99977666544332 236789999999999999999999999999999999999998887776654211111000
Q ss_pred ------------------------------------CC-----------CCCC-------HHHHHHHHHhhhhCCCCCCC
Q 003978 726 ------------------------------------IP-----------KDVD-------PRWAAIVESCWHSDPQCRPS 751 (782)
Q Consensus 726 ------------------------------------~p-----------~~~~-------~~l~~LI~~cL~~dP~~RPs 751 (782)
-| ..++ ..|++|+.+||..||++|.|
T Consensus 660 RKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit 739 (752)
T KOG0670|consen 660 RKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRIT 739 (752)
T ss_pred hhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCC
Confidence 00 0111 25789999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 003978 752 FQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 752 ~~ell~~L~~L~~~~~~~ 769 (782)
..+. |.|+||+.
T Consensus 740 ~nqA------L~HpFi~~ 751 (752)
T KOG0670|consen 740 VNQA------LKHPFITE 751 (752)
T ss_pred HHHH------hcCCcccC
Confidence 9998 67888864
No 393
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=3.5e-30 Score=293.54 Aligned_cols=258 Identities=19% Similarity=0.243 Sum_probs=186.1
Q ss_pred cccceeEeeeeccCCcEEEEEEEE------------------cCCeEEEEEEeccCCC--HH----------HHHHHHHH
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW------------------YGSDVAVKVFSRQEYS--DE----------VIHSFRQE 552 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~------------------~~~~vAiK~~~~~~~~--~~----------~~~~~~~E 552 (782)
..++|++.++||+|+||.||+|.. .++.||||.+...... .+ ..+....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 456899999999999999999963 2456999998643211 01 11223446
Q ss_pred HHHHHhCCCCce-----eEEeeeeec--------CCceeEEEeecCCCCHHHHHhhcC----------------------
Q 003978 553 VSLMKRLRHPNV-----LLFMGAVTS--------PQRLCIVTEFLPRGSLFRLLQRNT---------------------- 597 (782)
Q Consensus 553 i~il~~l~HpnI-----v~l~~~~~~--------~~~~~lv~E~~~ggsL~~~l~~~~---------------------- 597 (782)
+.++..++|.++ ++++++|.. ....+|||||+.+++|.+++....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766554 667777643 356899999999999999986421
Q ss_pred -CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc-ccccCCCCCCcccCcc
Q 003978 598 -TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY-LTTKTGKGTPQWMAPE 675 (782)
Q Consensus 598 -~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~-~~~~~~~Gt~~y~aPE 675 (782)
..+++..++.++.|++.+|.|||+.+ |+||||||+|||++.++.+||+|||++....... .......+|+.|+|||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~--ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE 380 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIG--IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE 380 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence 12345678889999999999999988 9999999999999999999999999986543321 1122334589999999
Q ss_pred cccCCCC----------------------CchhHHHHHHHHHHHHHcCCC-CCCCCChHHHHHH-----------hhccc
Q 003978 676 VLRNEPS----------------------DEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGA-----------VGFMN 721 (782)
Q Consensus 676 ~l~~~~~----------------------s~~sDIwSLG~ll~elltG~~-Pf~~~~~~~~~~~-----------i~~~~ 721 (782)
++..... ..+.||||+||++|+|++|.+ ||........... +....
T Consensus 381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~ 460 (507)
T PLN03224 381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQK 460 (507)
T ss_pred hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccC
Confidence 9864321 124699999999999999986 7764332211110 00011
Q ss_pred cccCCCCCCCHHHHHHHHHhhhhCC---CCCCCHHHHHHHHHHHHHHHhh
Q 003978 722 QRLEIPKDVDPRWAAIVESCWHSDP---QCRPSFQELVDKLRDLQRQYFQ 768 (782)
Q Consensus 722 ~~~~~p~~~~~~l~~LI~~cL~~dP---~~RPs~~ell~~L~~L~~~~~~ 768 (782)
.........++..++||.+||..+| .+|+|+.++ |.|+||.
T Consensus 461 ~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~ea------L~Hp~f~ 504 (507)
T PLN03224 461 YDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQA------LSHRFFL 504 (507)
T ss_pred CCcccccccChHHHHHHHHHhccCCCCcccCCCHHHH------hCCCCcC
Confidence 1223335678999999999999876 689999999 6789884
No 394
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=4.1e-30 Score=268.90 Aligned_cols=262 Identities=27% Similarity=0.451 Sum_probs=218.0
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEcCC-------eEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGS-------DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS 573 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~-------~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~ 573 (782)
.+...++++..++-+|+||.||.|.+..+ .|.+|.++... .+-.+..+..|--++..+.|||+..+.++...
T Consensus 280 ~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A-S~iQv~~~L~es~lly~~sH~nll~V~~V~ie 358 (563)
T KOG1024|consen 280 TVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA-SQIQVNLLLQESMLLYGASHPNLLSVLGVSIE 358 (563)
T ss_pred hhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc-cHHHHHHHHHHHHHHhcCcCCCccceeEEEee
Confidence 34456788899999999999999966432 35666664333 44456678888888999999999999998754
Q ss_pred -CCceeEEEeecCCCCHHHHHhhc-------CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEE
Q 003978 574 -PQRLCIVTEFLPRGSLFRLLQRN-------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVK 645 (782)
Q Consensus 574 -~~~~~lv~E~~~ggsL~~~l~~~-------~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vk 645 (782)
....++++.++.-|+|..+|... ...++..+...++.|++.||+|||.++ |||.||-..|++|++.-+||
T Consensus 359 ~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~--ViHkDiAaRNCvIdd~LqVk 436 (563)
T KOG1024|consen 359 DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG--VIHKDIAARNCVIDDQLQVK 436 (563)
T ss_pred ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC--cccchhhhhcceehhheeEE
Confidence 45678899999999999999732 234677788889999999999999999 99999999999999999999
Q ss_pred EEecCCCccccc-ccccc-cCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcccc
Q 003978 646 VGDFGLSRLKHE-TYLTT-KTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQ 722 (782)
Q Consensus 646 L~DFGla~~~~~-~~~~~-~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~ 722 (782)
|+|-.+++-.-. ++... ...-....||+||.+.+..|+.++|+||||++||||+| |+.||...++.++...+ +.++
T Consensus 437 ltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~yl-kdGy 515 (563)
T KOG1024|consen 437 LTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYL-KDGY 515 (563)
T ss_pred eccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHH-hccc
Confidence 999999984322 22111 12234668999999999999999999999999999999 99999999999887666 3677
Q ss_pred ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 723 RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 723 ~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
+...|-++|+++..++.-||...|++||+++++...|.++..+.
T Consensus 516 RlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ql 559 (563)
T KOG1024|consen 516 RLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQL 559 (563)
T ss_pred eecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999887654
No 395
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=9.3e-31 Score=253.73 Aligned_cols=215 Identities=25% Similarity=0.395 Sum_probs=174.4
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHH-hCCCCceeEEeeeeecCCc
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMK-RLRHPNVLLFMGAVTSPQR 576 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~-~l~HpnIv~l~~~~~~~~~ 576 (782)
+++..+++..+..||+|+||.|-+.++ .|.-.|+|.+..... ....+++.+|+.+.. ...+|++|.|||.+.....
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn-~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd 119 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN-SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD 119 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC-hHHHHHHHHhhhhhccCCCCCeEEEeehhhhcccc
Confidence 455666777888999999999888876 677789999865443 344456667777654 4479999999999999999
Q ss_pred eeEEEeecCCCCHHHHHh---hcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCc
Q 003978 577 LCIVTEFLPRGSLFRLLQ---RNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 653 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~---~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~ 653 (782)
++|.||.| ..+|..+.. ..+..+++..+-+|+..+++||.|||++ ..|||||+||.||||+.+|+||+||||.+-
T Consensus 120 vwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k-L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 120 VWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK-LSVIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred EEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH-hhhhhccCCcceEEEccCCcEEEcccccce
Confidence 99999999 447766543 3466789999999999999999999986 359999999999999999999999999998
Q ss_pred ccccccccccCCCCCCcccCcccccC----CCCCchhHHHHHHHHHHHHHcCCCCCCCC-ChHHHHHHhh
Q 003978 654 LKHETYLTTKTGKGTPQWMAPEVLRN----EPSDEKSDVYSFGVILWELATEKIPWDNL-NSMQVIGAVG 718 (782)
Q Consensus 654 ~~~~~~~~~~~~~Gt~~y~aPE~l~~----~~~s~~sDIwSLG~ll~elltG~~Pf~~~-~~~~~~~~i~ 718 (782)
...+....+ ...|-..|||||.+.. ..|+.++||||||++++||.++++||... .+.+.+.++.
T Consensus 198 ~L~dSiAkt-~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvV 266 (282)
T KOG0984|consen 198 YLVDSIAKT-MDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVV 266 (282)
T ss_pred eehhhhHHH-HhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHh
Confidence 776654433 2467788999999864 46788999999999999999999999754 4556555553
No 396
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.97 E-value=2.9e-29 Score=258.30 Aligned_cols=257 Identities=18% Similarity=0.298 Sum_probs=217.6
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCcee
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~ 578 (782)
+..-.|+++++||+|+||..+.|.. ++.+||||.-++... ...+..|.+.++.|. .++|...|.+.....+..
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~----APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~Ni 100 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE----APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNI 100 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEeccccCC----cchHHHHHHHHHHHcCCCCCCceeeeccccchhh
Confidence 3445899999999999999999974 899999998765443 245677888888884 799999999999888999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC-----CcEEEEecCCCc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH-----WTVKVGDFGLSR 653 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~-----~~vkL~DFGla~ 653 (782)
||||++ |.+|.|++.-++..|+.+++..++.||+.-++|+|++. +|+|||||+|+||..- ..|.|+|||+|+
T Consensus 101 LVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~--LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK 177 (449)
T KOG1165|consen 101 LVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKD--LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK 177 (449)
T ss_pred hhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcc--eeecccCccceeecCCCCCCCceEEEEeccchh
Confidence 999999 88999999999999999999999999999999999998 9999999999999743 359999999998
Q ss_pred cccc-------ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH---HHHHhhccccc
Q 003978 654 LKHE-------TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ---VIGAVGFMNQR 723 (782)
Q Consensus 654 ~~~~-------~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~---~~~~i~~~~~~ 723 (782)
.+.+ ++....+..||.+||+-..+.|...+.+.|+-|||.+++++|-|.+||.++.... .+++|......
T Consensus 178 ~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~ 257 (449)
T KOG1165|consen 178 EYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRS 257 (449)
T ss_pred hhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhcccccc
Confidence 6543 3445566789999999999999999999999999999999999999999875443 44444322221
Q ss_pred ---cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003978 724 ---LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 765 (782)
Q Consensus 724 ---~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~ 765 (782)
..+...+|.++...+...-..+..+-|+++-+...|.++...
T Consensus 258 T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr 302 (449)
T KOG1165|consen 258 TPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDR 302 (449)
T ss_pred CCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHh
Confidence 123456889999999999999999999999998888887653
No 397
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-30 Score=268.43 Aligned_cols=251 Identities=25% Similarity=0.345 Sum_probs=202.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC------
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ------ 575 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------ 575 (782)
..+|.-++.+|.|.- .|..+.+ .+++||+|.+..........++..+|..++..+.|+||++++.+|.-..
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 357888899999998 6666654 6889999988766444445678889999999999999999999986543
Q ss_pred ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
..|+|||+| ..+|...+. ..++-.++.++..|++.|+.|||+.| |+||||||+||++..++.+||.|||+|+..
T Consensus 95 e~y~v~e~m-~~nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~~--IihRdLkPsnivv~~~~~lKi~dfg~ar~e 168 (369)
T KOG0665|consen 95 EVYLVMELM-DANLCQVIL---MELDHETISYILYQMLCGIKHLHSAG--IIHRDLKPSNIVVNSDCTLKILDFGLARTE 168 (369)
T ss_pred hHHHHHHhh-hhHHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhcc--eeecccCcccceecchhheeeccchhhccc
Confidence 479999999 559988886 34778899999999999999999999 999999999999999999999999999876
Q ss_pred ccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-------------
Q 003978 656 HETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ------------- 722 (782)
Q Consensus 656 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~------------- 722 (782)
... ......+.|..|+|||++.+..+...+||||+||++.||++|..-|.+.+......++....+
T Consensus 169 ~~~-~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~ 247 (369)
T KOG0665|consen 169 DTD-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPT 247 (369)
T ss_pred Ccc-cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHH
Confidence 665 333455789999999999999999999999999999999999999987654332222110000
Q ss_pred -------c-----cC----CC-----------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003978 723 -------R-----LE----IP-----------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 768 (782)
Q Consensus 723 -------~-----~~----~p-----------~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~ 768 (782)
+ .. +| +.-...+++++.+||..||++|.|++++ |+|+|++
T Consensus 248 ~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~da------L~HPY~~ 314 (369)
T KOG0665|consen 248 VRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDA------LRHPYIK 314 (369)
T ss_pred HHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHH------hcCCeee
Confidence 0 00 11 0112357899999999999999999999 7889996
No 398
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.4e-31 Score=266.50 Aligned_cols=249 Identities=26% Similarity=0.406 Sum_probs=197.7
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC-----cee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ-----RLC 578 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~-----~~~ 578 (782)
+.+..+.||.|+||.||-+++ .++.||+|.+..-...--..+.+.+|+++|..++|.|++..+++..-.+ .+|
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 455567899999999999987 6888999988654333345577889999999999999999988876543 478
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
++.|+| ..+|..+|-. ...++...+..++.||++||.|||+.+ |.||||||.|+|++.+..+||||||+++.....
T Consensus 134 V~TELm-QSDLHKIIVS-PQ~Ls~DHvKVFlYQILRGLKYLHsA~--ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 134 VLTELM-QSDLHKIIVS-PQALTPDHVKVFVYQILRGLKYLHTAN--ILHRDIKPGNLLVNSNCILKICDFGLARTWDQR 209 (449)
T ss_pred HHHHHH-Hhhhhheecc-CCCCCcchhhhhHHHHHhhhHHHhhcc--hhhccCCCccEEeccCceEEecccccccccchh
Confidence 899999 5588888865 457899999999999999999999999 999999999999999999999999999875443
Q ss_pred cc-cccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc-------------
Q 003978 659 YL-TTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR------------- 723 (782)
Q Consensus 659 ~~-~~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~------------- 723 (782)
.. .....+-|..|+|||+++|. .|+.+.||||+||++.||+-.+.-|...++.+.+..|....+.
T Consensus 210 ~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGA 289 (449)
T KOG0664|consen 210 DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGA 289 (449)
T ss_pred hhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhh
Confidence 22 12223458899999999985 4789999999999999999999999888776655544221111
Q ss_pred --------cCCC-----------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003978 724 --------LEIP-----------KDVDPRWAAIVESCWHSDPQCRPSFQELVDK 758 (782)
Q Consensus 724 --------~~~p-----------~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~ 758 (782)
.+.| ..-..+...++.+||..||++|.+..+.+.+
T Consensus 290 k~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~ 343 (449)
T KOG0664|consen 290 KNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH 343 (449)
T ss_pred HHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence 1111 1223467889999999999999998888543
No 399
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=3e-28 Score=244.04 Aligned_cols=210 Identities=40% Similarity=0.656 Sum_probs=185.4
Q ss_pred eccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCCCCHH
Q 003978 513 IGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLF 590 (782)
Q Consensus 513 IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ggsL~ 590 (782)
||.|.+|.||++... +..+++|++....... ....+.+|++.++.+.|++|+++++++......+++|||+.+++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence 689999999999986 7889999987655332 3467889999999999999999999999989999999999989999
Q ss_pred HHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC-CCcEEEEecCCCcccccccccccCCCCCC
Q 003978 591 RLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-HWTVKVGDFGLSRLKHETYLTTKTGKGTP 669 (782)
Q Consensus 591 ~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~-~~~vkL~DFGla~~~~~~~~~~~~~~Gt~ 669 (782)
+++......++...++.++.+++.+|.+||+.+ ++|+||+|.||+++. ++.++|+|||.+..............+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~ 157 (215)
T cd00180 80 DLLKENEGKLSEDEILRILLQILEGLEYLHSNG--IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTP 157 (215)
T ss_pred HHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCC
Confidence 999865456889999999999999999999998 999999999999999 89999999999876554432233456788
Q ss_pred cccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCC
Q 003978 670 QWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQC 748 (782)
Q Consensus 670 ~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~ 748 (782)
.|++||.+... .++.++|+|+||+++|+| ..+.+++.+||..||++
T Consensus 158 ~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------~~~~~~l~~~l~~~p~~ 204 (215)
T cd00180 158 AYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------PELKDLIRKMLQKDPEK 204 (215)
T ss_pred CccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------HHHHHHHHHHhhCCccc
Confidence 99999999887 778999999999999999 78899999999999999
Q ss_pred CCCHHHHHHH
Q 003978 749 RPSFQELVDK 758 (782)
Q Consensus 749 RPs~~ell~~ 758 (782)
||++.++++.
T Consensus 205 R~~~~~l~~~ 214 (215)
T cd00180 205 RPSAKEILEH 214 (215)
T ss_pred CcCHHHHhhC
Confidence 9999999764
No 400
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=2.5e-30 Score=285.95 Aligned_cols=251 Identities=27% Similarity=0.419 Sum_probs=216.9
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
...++|+++..+|.|+||.|||+++ +++..|+|+++..... ....+..|+-+++..+|||||.+++.|-....+++
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~d--d~~~iqqei~~~~dc~h~nivay~gsylr~dklwi 89 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD--DFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWI 89 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCc--cccccccceeeeecCCCcChHHHHhhhhhhcCcEE
Confidence 3456899999999999999999987 5778999999876543 24567789999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
+||||.||+|.+.-.-. .++++.++..+++..++||+|||+.| =+|||||-.|||+++.|.|||.|||.+..+....
T Consensus 90 cMEycgggslQdiy~~T-gplselqiayvcRetl~gl~ylhs~g--k~hRdiKGanilltd~gDvklaDfgvsaqitati 166 (829)
T KOG0576|consen 90 CMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLKYLHSQG--KIHRDIKGANILLTDEGDVKLADFGVSAQITATI 166 (829)
T ss_pred EEEecCCCcccceeeec-ccchhHHHHHHHhhhhccchhhhcCC--cccccccccceeecccCceeecccCchhhhhhhh
Confidence 99999999999887653 47999999999999999999999998 8999999999999999999999999998877777
Q ss_pred ccccCCCCCCcccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc---cCCCCCCCHH
Q 003978 660 LTTKTGKGTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR---LEIPKDVDPR 733 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~---~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~---~~~p~~~~~~ 733 (782)
.....+.|||.|||||+-. ...|....|||++|++..|+-.-..|--....++.+..+.+.... .+-+..+++-
T Consensus 167 ~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~ 246 (829)
T KOG0576|consen 167 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEF 246 (829)
T ss_pred hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHH
Confidence 7778889999999999863 455888999999999999999888887777777776665443332 2233468899
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHH
Q 003978 734 WAAIVESCWHSDPQCRPSFQELVD 757 (782)
Q Consensus 734 l~~LI~~cL~~dP~~RPs~~ell~ 757 (782)
+-+|++.||.++|++||+++.+|.
T Consensus 247 fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 247 FHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred HHHHHHHHhcCCCccCCChhhhee
Confidence 999999999999999999999854
No 401
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=1.6e-29 Score=275.31 Aligned_cols=199 Identities=25% Similarity=0.431 Sum_probs=172.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEEcCC--eEEEEEEeccCCCHH------HHHHHHHHHHHHHhCC---CCceeEEeeeee
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWYGS--DVAVKVFSRQEYSDE------VIHSFRQEVSLMKRLR---HPNVLLFMGAVT 572 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~~~--~vAiK~~~~~~~~~~------~~~~~~~Ei~il~~l~---HpnIv~l~~~~~ 572 (782)
+.+|..++.+|.|+||.|++|.++.. .|+||.+.+++.-.+ .+-.+..||+||..++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 45799999999999999999998543 589999887654221 2234556999999997 999999999999
Q ss_pred cCCceeEEEeec-CCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCC
Q 003978 573 SPQRLCIVTEFL-PRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGL 651 (782)
Q Consensus 573 ~~~~~~lv~E~~-~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGl 651 (782)
+++.+||+||.- +|.+|+++|...+ .+++..+..|+.|++.|+++||++| |||||||-+||+++.+|.+||+|||.
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~kp-~m~E~eAk~IFkQV~agi~hlh~~~--ivhrdikdenvivd~~g~~klidfgs 716 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFKP-RMDEPEAKLIFKQVVAGIKHLHDQG--IVHRDIKDENVIVDSNGFVKLIDFGS 716 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhccC-ccchHHHHHHHHHHHhccccccccC--ceecccccccEEEecCCeEEEeeccc
Confidence 999999999964 5679999998754 6999999999999999999999999 99999999999999999999999999
Q ss_pred CcccccccccccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCC
Q 003978 652 SRLKHETYLTTKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDN 707 (782)
Q Consensus 652 a~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-s~~sDIwSLG~ll~elltG~~Pf~~ 707 (782)
|.+....+. ..++||..|.|||++.|.+| +..-|||+||++||-++....||.+
T Consensus 717 aa~~ksgpf--d~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 717 AAYTKSGPF--DVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred hhhhcCCCc--ceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 876555433 35689999999999999888 5678999999999999999999864
No 402
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=1.4e-26 Score=236.45 Aligned_cols=202 Identities=36% Similarity=0.590 Sum_probs=173.8
Q ss_pred eeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeec
Q 003978 507 LTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFL 584 (782)
Q Consensus 507 y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~ 584 (782)
|.+.+.||.|++|.||++... +..++||.+...... .....+.+|++.++.++|+||+++++++......++++||+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEecc
Confidence 567899999999999999985 578999998765433 24678889999999999999999999999889999999999
Q ss_pred CCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc-cccc
Q 003978 585 PRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY-LTTK 663 (782)
Q Consensus 585 ~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~-~~~~ 663 (782)
++++|.+++......+++..++.++.+++.+|.+||.++ ++|+||+|.||+++.++.++|+|||++....... ....
T Consensus 80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (225)
T smart00221 80 EGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLG--IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLK 157 (225)
T ss_pred CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccccc
Confidence 999999999765433789999999999999999999998 9999999999999999999999999987655432 1122
Q ss_pred CCCCCCcccCcccc-cCCCCCchhHHHHHHHHHHHHHcCCCCCCC-CChH
Q 003978 664 TGKGTPQWMAPEVL-RNEPSDEKSDVYSFGVILWELATEKIPWDN-LNSM 711 (782)
Q Consensus 664 ~~~Gt~~y~aPE~l-~~~~~s~~sDIwSLG~ll~elltG~~Pf~~-~~~~ 711 (782)
...++..|++||.+ ....++.++|+|+||+++|+|++|+.||.. .+..
T Consensus 158 ~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~ 207 (225)
T smart00221 158 TVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFT 207 (225)
T ss_pred ceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhH
Confidence 34678899999998 667778899999999999999999999977 3443
No 403
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=3.4e-26 Score=226.62 Aligned_cols=257 Identities=21% Similarity=0.301 Sum_probs=212.5
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCce
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~ 577 (782)
.+....|+++++||.|+||.+|++.. .|..||||+-+.....+ .+..|.++++.|+ -..|+.+..++.....-
T Consensus 11 ~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hp----qL~yEskvY~iL~~g~GiP~i~~y~~e~~yn 86 (341)
T KOG1163|consen 11 LIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHP----QLLYESKVYRILQGGVGIPHIRHYGTEKDYN 86 (341)
T ss_pred heeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCc----chhHHHHHHHHhccCCCCchhhhhccccccc
Confidence 45678999999999999999999986 68899999976554433 3556888888886 46788888888888888
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC---CCcEEEEecCCCcc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK---HWTVKVGDFGLSRL 654 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~---~~~vkL~DFGla~~ 654 (782)
.+||+++ |.+|.+++.-+...++..+++-++-|++.-++|+|.++ +|||||||+|+|..- ...+.|+|||+|+.
T Consensus 87 vlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~--fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKk 163 (341)
T KOG1163|consen 87 VLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRN--FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKK 163 (341)
T ss_pred eeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhc--cccccCCccceeeccccccceEEEEeccchhh
Confidence 9999999 89999999988889999999999999999999999998 999999999999963 34699999999985
Q ss_pred ccc-------ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHH---HHHhhcccc--
Q 003978 655 KHE-------TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQV---IGAVGFMNQ-- 722 (782)
Q Consensus 655 ~~~-------~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~---~~~i~~~~~-- 722 (782)
..+ ++.......||.+|.+-..+.+...+.+.|+-|+|.+|.++.-|.+||++...... ++.|....-
T Consensus 164 y~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~ 243 (341)
T KOG1163|consen 164 YRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMST 243 (341)
T ss_pred hccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCC
Confidence 433 34445566899999999999999899999999999999999999999998865443 333321111
Q ss_pred -ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 723 -RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 723 -~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
.-.+.+.+|.++...+..|-..-.++-|++.-+.+.|.-|..
T Consensus 244 ~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr 286 (341)
T KOG1163|consen 244 PIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFR 286 (341)
T ss_pred CHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHh
Confidence 112446789999999999999999999999988777765533
No 404
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.8e-27 Score=239.14 Aligned_cols=244 Identities=21% Similarity=0.333 Sum_probs=186.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEEcCC--eEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeee-eecCCceeE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWYGS--DVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGA-VTSPQRLCI 579 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~~~--~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~-~~~~~~~~l 579 (782)
.+.|.|.+.||+|.||.+-++.++++ .+++|.+++... ....|.+|...--.| .|.||+.-|++ |+..+.+++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t---t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF 99 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT---TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVF 99 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh---hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEE
Confidence 46899999999999999999999654 599999876543 346677777654445 58999988764 677788889
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc--CCCcEEEEecCCCccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD--KHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~--~~~~vkL~DFGla~~~~~ 657 (782)
++||++.|+|..-+... .+-+.....++.|+++|+.|||+.+ +||||||.+||||- +.-+|||||||+++..+.
T Consensus 100 ~qE~aP~gdL~snv~~~--GigE~~~K~v~~ql~SAi~fMHskn--lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 100 VQEFAPRGDLRSNVEAA--GIGEANTKKVFAQLLSAIEFMHSKN--LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred eeccCccchhhhhcCcc--cccHHHHHHHHHHHHHHHHHhhccc--hhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 99999999999988754 4788888999999999999999999 99999999999994 334799999999876554
Q ss_pred ccccccCCCCCCcccCcccccCCC-----CCchhHHHHHHHHHHHHHcCCCCCCCCChHH--HHHHhhccc-cccCCC--
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNEP-----SDEKSDVYSFGVILWELATEKIPWDNLNSMQ--VIGAVGFMN-QRLEIP-- 727 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~~-----~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~--~~~~i~~~~-~~~~~p-- 727 (782)
.-.. ..-+..|.+||++.... .++.+|||.||+++|.+|||.+||+...... ......+.. ..+..|
T Consensus 176 tV~~---~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~ 252 (378)
T KOG1345|consen 176 TVKY---LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKK 252 (378)
T ss_pred eehh---hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchh
Confidence 3221 12356799999875432 2567999999999999999999998543221 111222222 223333
Q ss_pred -CCCCHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003978 728 -KDVDPRWAAIVESCWHSDPQCRPSFQELVD 757 (782)
Q Consensus 728 -~~~~~~l~~LI~~cL~~dP~~RPs~~ell~ 757 (782)
..+++.+..++++-|..+|++|--..+..+
T Consensus 253 F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk 283 (378)
T KOG1345|consen 253 FNPFSEKALRLFKKSLTPRFKDRCKIWTAKK 283 (378)
T ss_pred hcccCHHHHHHHHHhcCCcccccchhHHHHH
Confidence 457889999999999999999955444433
No 405
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=3.1e-25 Score=242.22 Aligned_cols=255 Identities=22% Similarity=0.314 Sum_probs=203.1
Q ss_pred ceeEeeeeccCCcEEEEEEEEcCC---eEEEEEEeccCCCHHHHHHHHHHHHHHHhCCC----CceeEEeeee-ecCCce
Q 003978 506 DLTIGEQIGQGSCGTVYHAVWYGS---DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRH----PNVLLFMGAV-TSPQRL 577 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~~~~---~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~H----pnIv~l~~~~-~~~~~~ 577 (782)
+|++.++||+|+||.||+|..... .+|+|+......... ..+..|+.++..+.. +++..+++.+ ..+...
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~--~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~ 96 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP--SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN 96 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC--ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence 899999999999999999997554 589998765432211 156678888888862 5899999998 577788
Q ss_pred eEEEeecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC-----CcEEEEecCC
Q 003978 578 CIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH-----WTVKVGDFGL 651 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~-----~~vkL~DFGl 651 (782)
||||+.+ |.+|.++..... ..++..+++.++.|++.+|.+||+.| ++||||||.|+++... ..+.|.|||+
T Consensus 97 ~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G--~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 97 FIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG--FIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred EEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC--cccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 9999999 889999986655 78999999999999999999999999 9999999999999865 4699999999
Q ss_pred Cc--ccc-cc------ccc-ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc
Q 003978 652 SR--LKH-ET------YLT-TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN 721 (782)
Q Consensus 652 a~--~~~-~~------~~~-~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~ 721 (782)
++ ... .. ... .....||..|+++.++.+...+.+.|+|||+.++.+|+.|.+||...........+....
T Consensus 174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~ 253 (322)
T KOG1164|consen 174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDP 253 (322)
T ss_pred CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHh
Confidence 98 321 11 111 223469999999999999999999999999999999999999998776543333332222
Q ss_pred cccC---CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003978 722 QRLE---IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 765 (782)
Q Consensus 722 ~~~~---~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~ 765 (782)
.... .....+.++..+...+-..+...+|.+..+...|..+...
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 254 RKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred hhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 2211 3345667888888888889999999999998886665443
No 406
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.93 E-value=1.1e-26 Score=282.97 Aligned_cols=200 Identities=22% Similarity=0.246 Sum_probs=146.9
Q ss_pred CCC-CceeEEeeee-------ecCCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecC
Q 003978 559 LRH-PNVLLFMGAV-------TSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRD 630 (782)
Q Consensus 559 l~H-pnIv~l~~~~-------~~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrD 630 (782)
+.| +||+++++++ .....++++|||+ +++|+++|......+++..++.++.||+.||.|||++| |||||
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~g--IvHrD 105 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQG--IVVHN 105 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCC--eeecc
Confidence 345 5777888877 2334678889988 66999999766667999999999999999999999999 99999
Q ss_pred CCCCcEEEcCCC-------------------cEEEEecCCCccccccc----------------ccccCCCCCCcccCcc
Q 003978 631 LKSSNLLVDKHW-------------------TVKVGDFGLSRLKHETY----------------LTTKTGKGTPQWMAPE 675 (782)
Q Consensus 631 IKp~NILl~~~~-------------------~vkL~DFGla~~~~~~~----------------~~~~~~~Gt~~y~aPE 675 (782)
|||+||||+..+ .+||+|||+++...... ......+||+.|||||
T Consensus 106 lKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 185 (793)
T PLN00181 106 VRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPE 185 (793)
T ss_pred CCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChh
Confidence 999999996544 45556666654321100 0011235889999999
Q ss_pred cccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHH
Q 003978 676 VLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQEL 755 (782)
Q Consensus 676 ~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~el 755 (782)
++.+..++.++|||||||+||||++|..||..... ....+...... .......+....++.+||.++|.+||++.++
T Consensus 186 ~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~L~~~P~~Rps~~ei 262 (793)
T PLN00181 186 EDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR--TMSSLRHRVLP-PQILLNWPKEASFCLWLLHPEPSCRPSMSEL 262 (793)
T ss_pred hhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH--HHHHHHHhhcC-hhhhhcCHHHHHHHHHhCCCChhhCcChHHH
Confidence 99999999999999999999999999988764321 11122111111 1111224567889999999999999999999
Q ss_pred HHHHHHHHHHHhhcc
Q 003978 756 VDKLRDLQRQYFQAS 770 (782)
Q Consensus 756 l~~L~~L~~~~~~~~ 770 (782)
++|+||+..
T Consensus 263 ------l~h~~~~~~ 271 (793)
T PLN00181 263 ------LQSEFINEP 271 (793)
T ss_pred ------hhchhhhhh
Confidence 557777653
No 407
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.93 E-value=1.5e-26 Score=246.27 Aligned_cols=252 Identities=24% Similarity=0.377 Sum_probs=195.2
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE-----cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecC
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW-----YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSP 574 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~-----~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~ 574 (782)
..+.+.|.++++||+|+|++||++.. ..+.||+|.+..... ..++..|+++|..+. +.||+.+.+++..+
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~----p~ri~~El~~L~~~gG~~ni~~~~~~~rnn 107 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS----PSRILNELEMLYRLGGSDNIIKLNGCFRNN 107 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC----chHHHHHHHHHHHhccchhhhcchhhhccC
Confidence 34567899999999999999999975 345699998865432 346788999999994 99999999999999
Q ss_pred CceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC-CCcEEEEecCCCc
Q 003978 575 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-HWTVKVGDFGLSR 653 (782)
Q Consensus 575 ~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~-~~~vkL~DFGla~ 653 (782)
+...+||||++.....+++.. ++...+..+++.++.||.++|.+| ||||||||.|||.+. .++-.|+|||+|.
T Consensus 108 d~v~ivlp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~h~~G--IvHRDiKpsNFL~n~~t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 108 DQVAIVLPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHLHKNG--IVHRDIKPSNFLYNRRTQRGVLVDFGLAQ 181 (418)
T ss_pred CeeEEEecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhhhccC--ccccCCCccccccccccCCceEEechhHH
Confidence 999999999999988888763 567888999999999999999999 999999999999985 4678999999986
Q ss_pred ccc---------------ccc-----------------------------ccccCCCCCCcccCcccccCCC-CCchhHH
Q 003978 654 LKH---------------ETY-----------------------------LTTKTGKGTPQWMAPEVLRNEP-SDEKSDV 688 (782)
Q Consensus 654 ~~~---------------~~~-----------------------------~~~~~~~Gt~~y~aPE~l~~~~-~s~~sDI 688 (782)
... ... .......||+.|+|||++...+ .+.++||
T Consensus 182 ~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDi 261 (418)
T KOG1167|consen 182 RYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDI 261 (418)
T ss_pred HHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccce
Confidence 100 000 0011235999999999987655 4789999
Q ss_pred HHHHHHHHHHHcCCCCCCCCCh-HHHHHHh------------hccccc---------------------c----------
Q 003978 689 YSFGVILWELATEKIPWDNLNS-MQVIGAV------------GFMNQR---------------------L---------- 724 (782)
Q Consensus 689 wSLG~ll~elltG~~Pf~~~~~-~~~~~~i------------~~~~~~---------------------~---------- 724 (782)
||.|++++.++++.+||-.... ...+..+ ....+. .
T Consensus 262 ws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q 341 (418)
T KOG1167|consen 262 WSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQ 341 (418)
T ss_pred eeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccc
Confidence 9999999999999999843321 1111110 000000 0
Q ss_pred ------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003978 725 ------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 768 (782)
Q Consensus 725 ------~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~ 768 (782)
......+..+.+|+.+||..||.+|.|+++. |+|+||.
T Consensus 342 ~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeA------LkHpFF~ 385 (418)
T KOG1167|consen 342 PNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDA------LKHPFFD 385 (418)
T ss_pred cceeeccccccccHHHHHHHHHHccCChhhcccHHHH------hcCcCCc
Confidence 0001234578999999999999999999998 6778885
No 408
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.93 E-value=2.8e-25 Score=220.03 Aligned_cols=163 Identities=23% Similarity=0.318 Sum_probs=130.1
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003978 587 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 666 (782)
Q Consensus 587 gsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 666 (782)
|+|.+++......+++..++.++.||+.||.|||+++ ||+|||++.++.+|+ ||++...... ...
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~--------kp~Nil~~~~~~~~~--fG~~~~~~~~-----~~~ 65 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA--------KSGNILLTWDGLLKL--DGSVAFKTPE-----QSR 65 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC--------CcccEeEcCccceee--ccceEeeccc-----cCC
Confidence 6899999876667999999999999999999999875 999999999999999 9998765432 236
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH-HHHHhhcccccc-----CCCCCCCH--HHHHHH
Q 003978 667 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ-VIGAVGFMNQRL-----EIPKDVDP--RWAAIV 738 (782)
Q Consensus 667 Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~-~~~~i~~~~~~~-----~~p~~~~~--~l~~LI 738 (782)
||+.|||||++.+..++.++|||||||++|||++|..||....... ....+....... ..+..++. ++.+||
T Consensus 66 g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 145 (176)
T smart00750 66 VDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFM 145 (176)
T ss_pred CcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHH
Confidence 8999999999999999999999999999999999999997654322 222221111111 11122333 699999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 739 ESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 739 ~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
.+||..||.+||++.++++++..+..
T Consensus 146 ~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 146 RVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred HHHHhcccccccCHHHHHHHHHHHHH
Confidence 99999999999999999887766643
No 409
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.91 E-value=8.9e-23 Score=216.53 Aligned_cols=249 Identities=29% Similarity=0.442 Sum_probs=203.7
Q ss_pred eeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHH-HHHHHHHHHHHHHhCCCC-ceeEEeeeeecCCceeEEEeec
Q 003978 507 LTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDE-VIHSFRQEVSLMKRLRHP-NVLLFMGAVTSPQRLCIVTEFL 584 (782)
Q Consensus 507 y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~-~~~~~~~Ei~il~~l~Hp-nIv~l~~~~~~~~~~~lv~E~~ 584 (782)
|.+.+.||.|+||.||++... ..+++|.+........ ....+.+|+.++..+.|+ +|+++++.+......+++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 80 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR-KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYV 80 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec-cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecC
Confidence 788899999999999999988 7789999877665443 677899999999999988 7999999998777789999999
Q ss_pred CCCCHHHHHhhcC--CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC-cEEEEecCCCcccccccc-
Q 003978 585 PRGSLFRLLQRNT--TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW-TVKVGDFGLSRLKHETYL- 660 (782)
Q Consensus 585 ~ggsL~~~l~~~~--~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~-~vkL~DFGla~~~~~~~~- 660 (782)
.++++.+++.... ..+.......++.|++.++.|+|+.+ ++||||||+||+++..+ .++++|||.+........
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~--~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 81 DGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG--IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred CCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 9999997776544 26889999999999999999999999 99999999999999988 799999999875444321
Q ss_pred -----cccCCCCCCcccCcccccC---CCCCchhHHHHHHHHHHHHHcCCCCCCCCCh----HHHHHHhhccccc-cC--
Q 003978 661 -----TTKTGKGTPQWMAPEVLRN---EPSDEKSDVYSFGVILWELATEKIPWDNLNS----MQVIGAVGFMNQR-LE-- 725 (782)
Q Consensus 661 -----~~~~~~Gt~~y~aPE~l~~---~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~----~~~~~~i~~~~~~-~~-- 725 (782)
......|+..|++||.+.+ ...+...|+|++|++++++++|..||..... ......+...... ..
T Consensus 159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (384)
T COG0515 159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASP 238 (384)
T ss_pred ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccc
Confidence 2356689999999999988 5778899999999999999999999877763 3333333222212 11
Q ss_pred CCCCC----CHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003978 726 IPKDV----DPRWAAIVESCWHSDPQCRPSFQELVDK 758 (782)
Q Consensus 726 ~p~~~----~~~l~~LI~~cL~~dP~~RPs~~ell~~ 758 (782)
..... ...+.+++..|+..+|..|.+..+....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 239 LSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 11111 2578999999999999999998887554
No 410
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.90 E-value=1.7e-24 Score=251.96 Aligned_cols=259 Identities=24% Similarity=0.324 Sum_probs=201.6
Q ss_pred eEeeeeccCCcEEEEEEEEc--CCeEEEEEEe----ccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 508 TIGEQIGQGSCGTVYHAVWY--GSDVAVKVFS----RQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 508 ~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~----~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
.....+|.|++|.|+.+... ...++.|.+. ...........+..|+.+-..+.||||+..+..+.+....+-.|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 45678999999988877642 2334444433 11112233333667788888889999998888887776666669
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc--
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY-- 659 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~-- 659 (782)
|||++ +|+.++... ..+....+-.++.|++.||.|||..| |.||||||+|+++..+|.+||+|||.+.......
T Consensus 401 E~~~~-Dlf~~~~~~-~~~~~~e~~c~fKqL~~Gv~y~h~~G--iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~ 476 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSN-GKLTPLEADCFFKQLLRGVKYLHSMG--LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEK 476 (601)
T ss_pred hcccH-HHHHHHhcc-cccchhhhhHHHHHHHHHHHHHHhcC--ceeccCccccEEEecCCceEEeecCcceeeccCcch
Confidence 99999 999999864 36888899999999999999999999 9999999999999999999999999987654433
Q ss_pred --ccccCCCCCCcccCcccccCCCCCc-hhHHHHHHHHHHHHHcCCCCCCCCChHHHH--HHhhc-----cccccCCCCC
Q 003978 660 --LTTKTGKGTPQWMAPEVLRNEPSDE-KSDVYSFGVILWELATEKIPWDNLNSMQVI--GAVGF-----MNQRLEIPKD 729 (782)
Q Consensus 660 --~~~~~~~Gt~~y~aPE~l~~~~~s~-~sDIwSLG~ll~elltG~~Pf~~~~~~~~~--~~i~~-----~~~~~~~p~~ 729 (782)
......+|+..|+|||++.+..|+. ..||||.|++++.|.+|+.||......+.. ..... ......+...
T Consensus 477 ~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (601)
T KOG0590|consen 477 NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSL 556 (601)
T ss_pred hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHh
Confidence 2345668999999999999999976 589999999999999999999766544332 11111 1111223345
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcCCC
Q 003978 730 VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVGD 776 (782)
Q Consensus 730 ~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~~~ 776 (782)
++.+.+.+|.+||+.||.+|.|+.+| ++.+||+++.-|+-+
T Consensus 557 lp~~~~~~~~~~l~~~P~~R~ti~~i------~~d~W~~~i~~c~v~ 597 (601)
T KOG0590|consen 557 LPRETRIIIYRMLQLDPTKRITIEQI------LNDEWIRSIECCHVD 597 (601)
T ss_pred chhhHHHHHHHHccCChhheecHHHH------hhChHhhhcceEEec
Confidence 78889999999999999999999999 788999999887654
No 411
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=7.4e-23 Score=224.47 Aligned_cols=167 Identities=18% Similarity=0.141 Sum_probs=129.9
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE---cCCeEEEEEEeccCC---CHHHHHHHHHHHHHHHhCCCCceeE-Eeeeeec
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW---YGSDVAVKVFSRQEY---SDEVIHSFRQEVSLMKRLRHPNVLL-FMGAVTS 573 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~---~~~~vAiK~~~~~~~---~~~~~~~~~~Ei~il~~l~HpnIv~-l~~~~~~ 573 (782)
.....+|.+.+.||+|+||+||+|.+ .++.+|||++..... .......+.+|+++|+.++|+||+. ++++
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 45667899999999999999999987 355679998753311 2344567999999999999999985 5442
Q ss_pred CCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCC-CCCcEEEcCCCcEEEEecCCC
Q 003978 574 PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDL-KSSNLLVDKHWTVKVGDFGLS 652 (782)
Q Consensus 574 ~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDI-Kp~NILl~~~~~vkL~DFGla 652 (782)
+..|+|||||+|++|... .. .. ...++.+++.+|.|||++| |+|||| ||+|||++.++.+||+|||+|
T Consensus 91 -~~~~LVmE~~~G~~L~~~-~~----~~---~~~~~~~i~~aL~~lH~~g--IiHrDL~KP~NILv~~~~~ikLiDFGlA 159 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHLA-RP----HG---DPAWFRSAHRALRDLHRAG--ITHNDLAKPQNWLMGPDGEAAVIDFQLA 159 (365)
T ss_pred -CCcEEEEEccCCCCHHHh-Cc----cc---hHHHHHHHHHHHHHHHHCC--CeeCCCCCcceEEEcCCCCEEEEECccc
Confidence 457999999999999732 11 11 1356789999999999998 999999 999999999999999999999
Q ss_pred cccccccc--------cccCCCCCCcccCcccccCCC
Q 003978 653 RLKHETYL--------TTKTGKGTPQWMAPEVLRNEP 681 (782)
Q Consensus 653 ~~~~~~~~--------~~~~~~Gt~~y~aPE~l~~~~ 681 (782)
+....... ......+++.|++||.+....
T Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~ 196 (365)
T PRK09188 160 SVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRE 196 (365)
T ss_pred eecccCcchhhhhhhhhhhhhhccCccCCcccCChhh
Confidence 85543321 112446888999999986543
No 412
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.89 E-value=1.8e-23 Score=210.08 Aligned_cols=252 Identities=29% Similarity=0.619 Sum_probs=211.5
Q ss_pred cceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeec
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFL 584 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~ 584 (782)
.++.+.-+|.+...|..|+|++.|..++.|++............|..|.-.|+-+.||||..+++.+..+.++.+|..||
T Consensus 190 ~~lnl~tkl~e~hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~m 269 (448)
T KOG0195|consen 190 SSLNLITKLAESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYM 269 (448)
T ss_pred hhhhhhhhhccCCCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeec
Confidence 34555667889999999999999999999998776666666677888888899999999999999999999999999999
Q ss_pred CCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEE--ecCCCccccccccc
Q 003978 585 PRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVG--DFGLSRLKHETYLT 661 (782)
Q Consensus 585 ~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~--DFGla~~~~~~~~~ 661 (782)
+.|+|+..|... ...++..++..++.++++|++|||+..+-|----|....++|+++.+.+|. |--++. .
T Consensus 270 p~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsf-------q 342 (448)
T KOG0195|consen 270 PFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSF-------Q 342 (448)
T ss_pred cchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeee-------e
Confidence 999999999654 334677889999999999999999986433344588889999998776653 222211 1
Q ss_pred ccCCCCCCcccCcccccCCCCC---chhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHH
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSD---EKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 738 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s---~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI 738 (782)
.....-.|.||+||.+...+.+ .+.|+|||.+++|||.|...||....+.+..-++.....+..+|+.+++.+..|+
T Consensus 343 e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgis~hm~klm 422 (448)
T KOG0195|consen 343 EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISRHMNKLM 422 (448)
T ss_pred ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCccHHHHHHH
Confidence 1123347899999999877664 4789999999999999999999999999888888888889999999999999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHH
Q 003978 739 ESCWHSDPQCRPSFQELVDKLRDLQ 763 (782)
Q Consensus 739 ~~cL~~dP~~RPs~~ell~~L~~L~ 763 (782)
.-||.-||.+||.++.++--|++++
T Consensus 423 ~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 423 NICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HHHhcCCCCcCCCcceehhhHHHhc
Confidence 9999999999999999988887764
No 413
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.88 E-value=3.8e-24 Score=238.33 Aligned_cols=242 Identities=24% Similarity=0.393 Sum_probs=197.3
Q ss_pred eeccCCcEEEEEEEE-----cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCceeEEEeecC
Q 003978 512 QIGQGSCGTVYHAVW-----YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLCIVTEFLP 585 (782)
Q Consensus 512 ~IG~G~~G~Vy~~~~-----~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lv~E~~~ 585 (782)
.+|+|+||.|+++.. .+.-+|+|+.++.............|..++..++ ||.+|++...++.+..+++++++..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 379999999998864 3455899998765443222224556888888887 9999999999999999999999999
Q ss_pred CCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCC
Q 003978 586 RGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTG 665 (782)
Q Consensus 586 ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 665 (782)
||.|+..+.... .+.+.....+...++.+++++|+.+ |+|||+|++||+++.+|++++.|||+++..-+....
T Consensus 81 gg~lft~l~~~~-~f~~~~~~~~~aelaLald~lh~l~--iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~---- 153 (612)
T KOG0603|consen 81 GGDLFTRLSKEV-MFDELDVAFYLAELALALDHLHKLG--IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA---- 153 (612)
T ss_pred cchhhhccccCC-chHHHHHHHHHHHHHHHHhhcchhH--HHHhcccccceeecccCccccCCchhhhHhHhhhhc----
Confidence 999999987644 5777777888889999999999999 999999999999999999999999999865443322
Q ss_pred CCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhC
Q 003978 666 KGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSD 745 (782)
Q Consensus 666 ~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~d 745 (782)
+||..|||||++. .+..++|+||+|+++|+|++|..||.. +....| ....+.+|..++..+++++.+++.++
T Consensus 154 cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~I--l~~~~~~p~~l~~~a~~~~~~l~~r~ 225 (612)
T KOG0603|consen 154 CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRI--LKAELEMPRELSAEARSLFRQLFKRN 225 (612)
T ss_pred ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHH--hhhccCCchhhhHHHHHHHHHHHhhC
Confidence 8999999999998 567789999999999999999999987 333333 33467788999999999999999999
Q ss_pred CCCCCCH--HHHHHHHHHHHHHHhhccc
Q 003978 746 PQCRPSF--QELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 746 P~~RPs~--~ell~~L~~L~~~~~~~~~ 771 (782)
|.+|.-. +.+.+ -.+|++|+.+.
T Consensus 226 p~nrLg~~~~~~~e---ik~h~f~~~i~ 250 (612)
T KOG0603|consen 226 PENRLGAGPDGVDE---IKQHEFFQSID 250 (612)
T ss_pred HHHHhccCcchhHH---Hhccchheeee
Confidence 9999643 33322 25677776553
No 414
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.85 E-value=3.6e-21 Score=197.28 Aligned_cols=175 Identities=13% Similarity=0.122 Sum_probs=137.3
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCH-HHHHH------HHHHHHHHHhCCCCceeEEeeeeec
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSD-EVIHS------FRQEVSLMKRLRHPNVLLFMGAVTS 573 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~-~~~~~------~~~Ei~il~~l~HpnIv~l~~~~~~ 573 (782)
.++.++|++.++||.|+||.||++...+..+|||++....... ..... +.+|++.+.++.|++|+.+.+++..
T Consensus 27 ~~l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 27 DFLSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred HHhhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 3567899999999999999999988778889999997654433 33333 5789999999999999999888653
Q ss_pred C--------CceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEE
Q 003978 574 P--------QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVK 645 (782)
Q Consensus 574 ~--------~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vk 645 (782)
. ...+|+|||++|.+|.++.. +++ ....+++.+|..||+.| ++|+||||.||+++.+| ++
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH~~g--i~H~Dikp~Nili~~~g-i~ 174 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLHQHG--MVSGDPHKGNFIVSKNG-LR 174 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHHHcC--CccCCCChHHEEEeCCC-EE
Confidence 3 35789999999999988742 222 23558999999999999 99999999999999998 99
Q ss_pred EEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHH
Q 003978 646 VGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELA 699 (782)
Q Consensus 646 L~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ell 699 (782)
|+|||........... ...+....++.++|+|+||+++..+.
T Consensus 175 liDfg~~~~~~e~~a~------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 175 IIDLSGKRCTAQRKAK------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEECCCcccccchhhH------------HHHHHHhHhcccccccceeEeehHHH
Confidence 9999987644322111 11334555678999999999987654
No 415
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.84 E-value=1e-20 Score=199.28 Aligned_cols=255 Identities=25% Similarity=0.366 Sum_probs=180.3
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEcC------------------------------C-------eEEEEEEeccC-
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYG------------------------------S-------DVAVKVFSRQE- 540 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~------------------------------~-------~vAiK~~~~~~- 540 (782)
+.....++|++++.||+|....||.+.... + +.|||.+-.-.
T Consensus 151 dskFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~ 230 (598)
T KOG4158|consen 151 DSKFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEH 230 (598)
T ss_pred hcccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhccccc
Confidence 334556799999999999999999774310 0 14566543211
Q ss_pred --CCHHHHHHHHHHH------HH--------HHh--------CCCCceeEEeeeeec-----------------------
Q 003978 541 --YSDEVIHSFRQEV------SL--------MKR--------LRHPNVLLFMGAVTS----------------------- 573 (782)
Q Consensus 541 --~~~~~~~~~~~Ei------~i--------l~~--------l~HpnIv~l~~~~~~----------------------- 573 (782)
.....++...+|. .+ .+. -+|||||++..+|.+
T Consensus 231 ~s~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~ 310 (598)
T KOG4158|consen 231 DSGDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPS 310 (598)
T ss_pred CCchHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceeccc
Confidence 1223333333332 11 111 259999999887632
Q ss_pred ----CCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc--CCC--cEE
Q 003978 574 ----PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD--KHW--TVK 645 (782)
Q Consensus 574 ----~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~--~~~--~vk 645 (782)
+..+|+||..+.. +|..++-.+ ..+......++.|+++|+.|||++| |.|||+|.+||||. +++ .+.
T Consensus 311 g~g~~~tlylvMkrY~~-tLr~yl~~~--~~s~r~~~~~laQlLEav~hL~~hg--vAhRDlKSDNiL~ElddD~~P~LV 385 (598)
T KOG4158|consen 311 GAGEPKTLYLVMKRYRQ-TLREYLWTR--HRSYRTGRVILAQLLEAVTHLHKHG--VAHRDLKSDNILLELDDDEIPQLV 385 (598)
T ss_pred ccCCCceEEEehhcchh-hHHHHHhcC--CCchHHHHHHHHHHHHHHHHHHHcc--chhhcccccceEEEecCCCCcEEE
Confidence 2357999998854 999999754 3667777888899999999999999 99999999999994 333 478
Q ss_pred EEecCCCccccc-----cccc-ccCCCCCCcccCcccccCCCC------CchhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 003978 646 VGDFGLSRLKHE-----TYLT-TKTGKGTPQWMAPEVLRNEPS------DEKSDVYSFGVILWELATEKIPWDNLNSMQV 713 (782)
Q Consensus 646 L~DFGla~~~~~-----~~~~-~~~~~Gt~~y~aPE~l~~~~~------s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~ 713 (782)
|+|||++--... ++.. ....-|.-..||||+....+= -.|+|.|+.|.+.||++.-..||........
T Consensus 386 vaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L 465 (598)
T KOG4158|consen 386 VADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLL 465 (598)
T ss_pred EcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhee
Confidence 999998743222 1111 122347888999999864331 2589999999999999999999987443332
Q ss_pred HHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003978 714 IGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDK 758 (782)
Q Consensus 714 ~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~ 758 (782)
-.........+.+|..+++.+++++..+|+.||.+|++.+=....
T Consensus 466 ~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANv 510 (598)
T KOG4158|consen 466 DTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANV 510 (598)
T ss_pred chhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhH
Confidence 222222334677888999999999999999999999987654443
No 416
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.83 E-value=4.6e-21 Score=222.61 Aligned_cols=260 Identities=20% Similarity=0.232 Sum_probs=192.3
Q ss_pred ceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCC--CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEY--SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
+|...+.||.+.|=+|.++.+..-.|+||++-+... .-.-..+...|++ ...++|||++.+.-+.+.+...|||-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 688889999999999999998666699999866542 2222233334555 6667999999999998888899999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc--cc-cc
Q 003978 584 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH--ET-YL 660 (782)
Q Consensus 584 ~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~--~~-~~ 660 (782)
+.. +|+|.|..++ -+..-+..+|+.||+.||.-+|..| |+|+|||.+||||+.-.-+.|+||..-+... ++ +.
T Consensus 103 vkh-nLyDRlSTRP-FL~~iEKkWiaFQLL~al~qcH~~g--VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPa 178 (1431)
T KOG1240|consen 103 VKH-NLYDRLSTRP-FLVLIEKKWIAFQLLKALSQCHKLG--VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPA 178 (1431)
T ss_pred Hhh-hhhhhhccch-HHHHHHHHHHHHHHHHHHHHHHHcC--ccccccccceEEEeeechhhhhcccccCCccCCCCCcc
Confidence 954 9999997644 4677788889999999999999999 9999999999999998899999998654321 11 11
Q ss_pred c----ccCCCCCCcccCcccccCCC-----------CCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhh--cccc
Q 003978 661 T----TKTGKGTPQWMAPEVLRNEP-----------SDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVG--FMNQ 722 (782)
Q Consensus 661 ~----~~~~~Gt~~y~aPE~l~~~~-----------~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~--~~~~ 722 (782)
. ..+...-..|.|||.+.... .+++-||||+||+++||++ |.+||.- .+.+.... ....
T Consensus 179 df~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L---SQL~aYr~~~~~~~ 255 (1431)
T KOG1240|consen 179 DFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL---SQLLAYRSGNADDP 255 (1431)
T ss_pred cceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH---HHHHhHhccCccCH
Confidence 1 01122345799999986411 3568899999999999998 6888842 11111110 0000
Q ss_pred ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHH---------HHHHHHHHhhcccCc
Q 003978 723 RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDK---------LRDLQRQYFQASRST 773 (782)
Q Consensus 723 ~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~---------L~~L~~~~~~~~~~~ 773 (782)
..-+.+--+..+++||..|++.||.+|.+++++|+. |..+.+.||..-+..
T Consensus 256 e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~~FP~yFy~FL~~Y~~~~~~~ 315 (1431)
T KOG1240|consen 256 EQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKYRGLVFPEYFYSFLYDYLDRFVPL 315 (1431)
T ss_pred HHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHhhhccccHHHHHHHHHHHHHhcCCc
Confidence 111122245689999999999999999999999987 677788887654443
No 417
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.83 E-value=2.3e-20 Score=196.85 Aligned_cols=233 Identities=20% Similarity=0.309 Sum_probs=152.7
Q ss_pred cceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCC-HHHHHHHHHHHHHHHhCC----------CCceeEEeeee
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLR----------HPNVLLFMGAV 571 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~-~~~~~~~~~Ei~il~~l~----------HpnIv~l~~~~ 571 (782)
..+..+..||.|+++.||.+++. ++++|||++...... ....+.+++|.-....+. |-.++-.++..
T Consensus 12 r~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~ 91 (288)
T PF14531_consen 12 RTLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLL 91 (288)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEE
T ss_pred eEEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEE
Confidence 35778899999999999999994 588999998655432 234566666654443332 11222222222
Q ss_pred ec---------C---C-----ceeEEEeecCCCCHHHHHhh---cC---CcchHHHHHHHHHHHHHHHHhhhcCCCCeee
Q 003978 572 TS---------P---Q-----RLCIVTEFLPRGSLFRLLQR---NT---TKLDWRRRILMALDIARGVSYLHHCNPPIIH 628 (782)
Q Consensus 572 ~~---------~---~-----~~~lv~E~~~ggsL~~~l~~---~~---~~l~~~~~~~i~~qll~aL~~LH~~~~~ivH 628 (782)
.. . . +.+++|+-+ .++|.+++.. .. ..+.....+.+..|+++.+++||.+| |||
T Consensus 92 ~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G--lVH 168 (288)
T PF14531_consen 92 RIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG--LVH 168 (288)
T ss_dssp EETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT--EEE
T ss_pred EEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc--eEe
Confidence 11 1 1 346788888 5588877632 11 22445555677789999999999999 999
Q ss_pred cCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCCCCCcccCcccccC--------CCCCchhHHHHHHHHHHHHHc
Q 003978 629 RDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRN--------EPSDEKSDVYSFGVILWELAT 700 (782)
Q Consensus 629 rDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~--------~~~s~~sDIwSLG~ll~ellt 700 (782)
+||||+||+++.+|.++|+||+.....+..... ...+..|.+||.... ..++.+.|.|+||+++|.|+|
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~---~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC 245 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC---SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC 245 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG---GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCceeec---cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence 999999999999999999999987666554332 233578999998743 245789999999999999999
Q ss_pred CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCC
Q 003978 701 EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCR 749 (782)
Q Consensus 701 G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~R 749 (782)
|.+||.......... ........+|..++.||..+|+.||.+|
T Consensus 246 ~~lPf~~~~~~~~~~------~~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 246 GRLPFGLSSPEADPE------WDFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp SS-STCCCGGGSTSG------GGGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred ccCCCCCCCcccccc------ccchhcCCcCHHHHHHHHHHccCCcccC
Confidence 999998664332111 0233334788999999999999999987
No 418
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.82 E-value=1.6e-19 Score=181.57 Aligned_cols=187 Identities=16% Similarity=0.170 Sum_probs=142.9
Q ss_pred eEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCH--HHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCceeEEEeec
Q 003978 508 TIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSD--EVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLCIVTEFL 584 (782)
Q Consensus 508 ~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~--~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lv~E~~ 584 (782)
-+...|++|+||+||.+...+.+++.+.+.....-. -....+.+|+++|+.|. |++|++++++ +..|++|||+
T Consensus 5 ~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred ccceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 356789999999999888888888877776544311 12235789999999995 5889999886 3469999999
Q ss_pred CCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCC-CCCcEEEcCCCcEEEEecCCCcccccccc---
Q 003978 585 PRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDL-KSSNLLVDKHWTVKVGDFGLSRLKHETYL--- 660 (782)
Q Consensus 585 ~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDI-Kp~NILl~~~~~vkL~DFGla~~~~~~~~--- 660 (782)
.|.+|...+... ...++.|++.+|.+||++| |+|||| ||+|||++.++.++|+|||++...+....
T Consensus 81 ~G~~L~~~~~~~--------~~~~~~qi~~~L~~lH~~G--IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r 150 (218)
T PRK12274 81 AGAAMYQRPPRG--------DLAYFRAARRLLQQLHRCG--VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMR 150 (218)
T ss_pred cCccHHhhhhhh--------hHHHHHHHHHHHHHHHHCc--CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHH
Confidence 999987654211 1346779999999999999 999999 79999999999999999999985443321
Q ss_pred --c--------ccCCCCCCcccCcccccCC-CCC-chhHHHHHHHHHHHHHcCCCCCCCC
Q 003978 661 --T--------TKTGKGTPQWMAPEVLRNE-PSD-EKSDVYSFGVILWELATEKIPWDNL 708 (782)
Q Consensus 661 --~--------~~~~~Gt~~y~aPE~l~~~-~~s-~~sDIwSLG~ll~elltG~~Pf~~~ 708 (782)
. ..-...++.|+.|+...-. ..+ .+.++++.|+-+|.|+|+..|+...
T Consensus 151 ~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 151 LLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 0 1112367888888875432 233 5789999999999999999886543
No 419
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.81 E-value=4.1e-20 Score=186.35 Aligned_cols=141 Identities=20% Similarity=0.219 Sum_probs=107.8
Q ss_pred eeeeccCCcEEEEEEEE-cCCeEEEEEEeccCCCHHH------------------------HHHHHHHHHHHHhCCCCce
Q 003978 510 GEQIGQGSCGTVYHAVW-YGSDVAVKVFSRQEYSDEV------------------------IHSFRQEVSLMKRLRHPNV 564 (782)
Q Consensus 510 ~~~IG~G~~G~Vy~~~~-~~~~vAiK~~~~~~~~~~~------------------------~~~~~~Ei~il~~l~HpnI 564 (782)
...||+|+||.||+|.. .|+.||||+++........ ......|++++..+.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 46799999999999987 5889999999764321100 1223459999999987776
Q ss_pred eEEeeeeecCCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhh-hcCCCCeeecCCCCCcEEEcCCCc
Q 003978 565 LLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYL-HHCNPPIIHRDLKSSNLLVDKHWT 643 (782)
Q Consensus 565 v~l~~~~~~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~L-H~~~~~ivHrDIKp~NILl~~~~~ 643 (782)
.....+.. ...+|||||++|+++...+.. ...++...+..++.|++.+|.+| |+.| |+||||||+|||++ ++.
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~l~H~~g--iiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLK-DAPLSESKARELYLQVIQIMRILYQDCR--LVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhh-cCCCCHHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEE-CCc
Confidence 43333222 223899999988777655333 34688999999999999999999 6888 99999999999998 478
Q ss_pred EEEEecCCCcccc
Q 003978 644 VKVGDFGLSRLKH 656 (782)
Q Consensus 644 vkL~DFGla~~~~ 656 (782)
++|+|||+|....
T Consensus 156 v~LiDFG~a~~~~ 168 (190)
T cd05147 156 LYIIDVSQSVEHD 168 (190)
T ss_pred EEEEEccccccCC
Confidence 9999999987543
No 420
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.80 E-value=9.3e-20 Score=212.03 Aligned_cols=219 Identities=28% Similarity=0.433 Sum_probs=158.5
Q ss_pred cceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
.+|..++.|-.|+||.||.++++ .+++|+|+= ++... +++ ++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~kiN-kq~li------lRn---ilt~a~npfvv----------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKIN-KQNLI------LRN---ILTFAGNPFVV----------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhccc-ccchh------hhc---cccccCCccee-----------------
Confidence 46788899999999999999886 677999543 22210 000 33333444444
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc----
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET---- 658 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~---- 658 (782)
|+-...++. ..+++. +++.+++|||+.+ |+|||+||+|++|+.-|++|++|||+++..-..
T Consensus 136 ----gDc~tllk~-~g~lPv--------dmvla~Eylh~yg--ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn 200 (1205)
T KOG0606|consen 136 ----GDCATLLKN-IGPLPV--------DMVLAVEYLHSYG--IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN 200 (1205)
T ss_pred ----chhhhhccc-CCCCcc--------hhhHHhHhhccCC--eecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence 233333332 223332 2377899999988 999999999999999999999999998642211
Q ss_pred ----cc-------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhc-cccccCC
Q 003978 659 ----YL-------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGF-MNQRLEI 726 (782)
Q Consensus 659 ----~~-------~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~-~~~~~~~ 726 (782)
++ .....+|||.|.|||++.-+.|+..+|+|+||+++|+++.|..||.+....+.+..+.. ...+++-
T Consensus 201 l~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~ 280 (1205)
T KOG0606|consen 201 LKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEE 280 (1205)
T ss_pred hhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccccc
Confidence 11 12234799999999999999999999999999999999999999999988887766532 2234444
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003978 727 PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 768 (782)
Q Consensus 727 p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~ 768 (782)
...++++++++|.++|+.+|..|--...- ++--+|.||+
T Consensus 281 dea~p~Ea~dli~~LL~qnp~~Rlgt~ga---~evk~h~ff~ 319 (1205)
T KOG0606|consen 281 DEALPPEAQDLIEQLLRQNPLCRLGTGGA---LEVKQHGFFQ 319 (1205)
T ss_pred CcCCCHHHHHHHHHHHHhChHhhcccchh---hhhhhcccee
Confidence 56789999999999999999999632221 2224667764
No 421
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=4.5e-19 Score=178.84 Aligned_cols=141 Identities=21% Similarity=0.208 Sum_probs=110.1
Q ss_pred eeeeccCCcEEEEEEEE-cCCeEEEEEEeccCCC----------------------H--HHHHHHHHHHHHHHhCCCCce
Q 003978 510 GEQIGQGSCGTVYHAVW-YGSDVAVKVFSRQEYS----------------------D--EVIHSFRQEVSLMKRLRHPNV 564 (782)
Q Consensus 510 ~~~IG~G~~G~Vy~~~~-~~~~vAiK~~~~~~~~----------------------~--~~~~~~~~Ei~il~~l~HpnI 564 (782)
...||+|+||.||+|.. .|+.||||+++..... . .....+..|.+.+..+.|++|
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46899999999999987 4889999999765211 0 012234678999999999887
Q ss_pred eEEeeeeecCCceeEEEeecCCCCHHHH-HhhcCCcchHHHHHHHHHHHHHHHHhhhc-CCCCeeecCCCCCcEEEcCCC
Q 003978 565 LLFMGAVTSPQRLCIVTEFLPRGSLFRL-LQRNTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHW 642 (782)
Q Consensus 565 v~l~~~~~~~~~~~lv~E~~~ggsL~~~-l~~~~~~l~~~~~~~i~~qll~aL~~LH~-~~~~ivHrDIKp~NILl~~~~ 642 (782)
.....+... ..||||||++|+++... +.. ..++...+..++.|++.+|.+||. .| |+||||||+|||++ ++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~~~g--ivHrDlkP~NIll~-~~ 154 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQEAG--LVHGDLSEYNILYH-DG 154 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHHhCC--EecCCCChhhEEEE-CC
Confidence 544443332 24899999988755433 432 357788899999999999999999 88 99999999999999 78
Q ss_pred cEEEEecCCCccccc
Q 003978 643 TVKVGDFGLSRLKHE 657 (782)
Q Consensus 643 ~vkL~DFGla~~~~~ 657 (782)
.++|+|||++.....
T Consensus 155 ~~~liDFG~a~~~~~ 169 (190)
T cd05145 155 KPYIIDVSQAVELDH 169 (190)
T ss_pred CEEEEEcccceecCC
Confidence 999999999875543
No 422
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.79 E-value=1.2e-18 Score=207.11 Aligned_cols=255 Identities=24% Similarity=0.315 Sum_probs=189.4
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEE-cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC---CCceeEEeeeeecC
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVW-YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR---HPNVLLFMGAVTSP 574 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~-~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~---HpnIv~l~~~~~~~ 574 (782)
..+...+.|.|-+.||+|+||+||+|.. +++.||||+-+.....+=.+ -.+++.+|+ -+.|..+..++.-.
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI-----~~q~~~RLk~~~~~~~~~~~~a~~~~ 766 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYI-----CLQVMERLKPQMLPSIMHISSAHVFQ 766 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeee-----hHHHHHhhchhhhcchHHHHHHHccC
Confidence 4456678999999999999999999986 57789999976654322111 112222232 23466666666677
Q ss_pred CceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC-------CCcEEEE
Q 003978 575 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-------HWTVKVG 647 (782)
Q Consensus 575 ~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~-------~~~vkL~ 647 (782)
+..+||+||.+.|+|.+++.. ...+++..+.++..||+..++.||.++ |||+||||+|+||.. .--++|+
T Consensus 767 ~~S~lv~ey~~~Gtlld~~N~-~~~m~e~lv~~~~~qml~ive~lH~~~--IIHgDiKPDNfll~~~~~~~~~~~~l~lI 843 (974)
T KOG1166|consen 767 NASVLVSEYSPYGTLLDLINT-NKVMDEYLVMFFSCQMLRIVEHLHAMG--IIHGDIKPDNFLLRREICADSDSKGLYLI 843 (974)
T ss_pred CcceeeeeccccccHHHhhcc-CCCCCchhhhHHHHHHHHHHHHHHhcc--eecccCCcceeEeecccCCCCcccceEEE
Confidence 788999999999999999984 456899999999999999999999999 999999999999953 2359999
Q ss_pred ecCCCcccc--cccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccC
Q 003978 648 DFGLSRLKH--ETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE 725 (782)
Q Consensus 648 DFGla~~~~--~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~ 725 (782)
|||.+--+. ....+....++|-.+-.+|+..|+++++..|.|.|..+++-||+|++- + + .......
T Consensus 844 DfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~-------q----~-~~g~~~~ 911 (974)
T KOG1166|consen 844 DFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM-------E----V-KNGSSWM 911 (974)
T ss_pred ecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH-------H----h-cCCccee
Confidence 999985321 112233455789999999999999999999999999999999999641 1 1 1111111
Q ss_pred ----CCCCCCH-HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 726 ----IPKDVDP-RWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 726 ----~p~~~~~-~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
++..+.. -|..|+..+|..|=..=|.+.+|...|++...+-|+..+..
T Consensus 912 ~~~~~~Ry~~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~~~~~~~~~~ 964 (974)
T KOG1166|consen 912 VKTNFPRYWKRDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLAEHFTGLREA 964 (974)
T ss_pred ccccchhhhhHHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222322 36789999999554455888898888888877777654433
No 423
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.75 E-value=2.8e-17 Score=167.99 Aligned_cols=136 Identities=26% Similarity=0.392 Sum_probs=114.8
Q ss_pred eeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHH------HHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeec
Q 003978 511 EQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDE------VIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFL 584 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~------~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~ 584 (782)
+.||+|++|.||+|.+.+..+++|+......... ....+.+|+.++..+.|++|+....++......+++|||+
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 81 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYI 81 (211)
T ss_pred cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEe
Confidence 5799999999999999999999998764433211 2245778999999999998877777776777889999999
Q ss_pred CCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 585 PRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 585 ~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
+|++|.+++.... . ....++.+++.+|.+||..+ ++|+|++|.|||++ ++.++|+|||++..
T Consensus 82 ~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~~--i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 82 EGEPLKDLINSNG----M-EELELSREIGRLVGKLHSAG--IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred CCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhCC--cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999986532 1 77788999999999999998 99999999999999 78999999998864
No 424
>PRK10345 hypothetical protein; Provisional
Probab=99.75 E-value=1.1e-17 Score=170.68 Aligned_cols=133 Identities=16% Similarity=0.228 Sum_probs=102.3
Q ss_pred EeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-----CCCceeEEeeeeecCC---cee-E
Q 003978 509 IGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-----RHPNVLLFMGAVTSPQ---RLC-I 579 (782)
Q Consensus 509 i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-----~HpnIv~l~~~~~~~~---~~~-l 579 (782)
-.++||+|+||.||.-..... .+||++...... ....+.+|+.+++.+ .||||++++++++++. .++ +
T Consensus 6 ~~~~LG~G~~~~Vy~hp~~~~-k~IKv~~~~~~~--~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 6 EQSPLGTGRHRKCYAHPEDAQ-RCIKIVYHRGDG--GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred CcceecCCCceEEEECCCCcC-eEEEEEeccccc--hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 346899999999996222233 478888654322 235789999999999 5799999999998874 333 7
Q ss_pred EEee--cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHH-HhhhcCCCCeeecCCCCCcEEEcCC----CcEEEEecC
Q 003978 580 VTEF--LPRGSLFRLLQRNTTKLDWRRRILMALDIARGV-SYLHHCNPPIIHRDLKSSNLLVDKH----WTVKVGDFG 650 (782)
Q Consensus 580 v~E~--~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL-~~LH~~~~~ivHrDIKp~NILl~~~----~~vkL~DFG 650 (782)
|||| +.+++|.+++.+. .+++. ..++.+++.++ +|||+++ ||||||||+|||++.. +.++|+||+
T Consensus 83 I~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~~yLh~~~--IvhrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKKLKRYLLDNR--IVTMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred EecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 8999 4578999999763 35555 34567888777 9999999 9999999999999743 479999944
No 425
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.73 E-value=2.7e-17 Score=166.57 Aligned_cols=133 Identities=25% Similarity=0.355 Sum_probs=108.8
Q ss_pred eeccCCcEEEEEEEEcCCeEEEEEEeccCCCH------HHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecC
Q 003978 512 QIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSD------EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLP 585 (782)
Q Consensus 512 ~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~------~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ 585 (782)
.||+|+||.||++.+.+.++++|+........ .....+.+|++++..+.|+++.....++......+++|||++
T Consensus 1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~ 80 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE 80 (199)
T ss_pred CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence 48999999999999999999999975543211 123567889999999988876554444555667899999999
Q ss_pred CCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 586 RGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 586 ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
|++|.+++..... .++.+++.+|.+||+.+ ++|+|+||.||+++ ++.++++|||++...
T Consensus 81 g~~l~~~~~~~~~--------~~~~~i~~~l~~lH~~g--i~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 81 GKPLKDVIEEGND--------ELLREIGRLVGKLHKAG--IVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CccHHHHHhhcHH--------HHHHHHHHHHHHHHHCC--eecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 9999998864321 67889999999999998 99999999999999 789999999998753
No 426
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.70 E-value=4.4e-17 Score=182.35 Aligned_cols=208 Identities=34% Similarity=0.577 Sum_probs=163.6
Q ss_pred HHhCCCCceeEEeeeeecCCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCc
Q 003978 556 MKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSN 635 (782)
Q Consensus 556 l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~N 635 (782)
|+.+.|.|+.+|++.+.....+++|.+||..|+|.+.+......+++.....++++|+.||.|||..-. ..|+.++..|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i-~~hg~l~s~n 79 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPI-GYHGALKSSN 79 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcc-eeeeeecccc
Confidence 356789999999999999999999999999999999998877889999999999999999999998652 3999999999
Q ss_pred EEEcCCCcEEEEecCCCcccccc--cccccCCCCCCcccCcccccCCC-------CCchhHHHHHHHHHHHHHcCCCCCC
Q 003978 636 LLVDKHWTVKVGDFGLSRLKHET--YLTTKTGKGTPQWMAPEVLRNEP-------SDEKSDVYSFGVILWELATEKIPWD 706 (782)
Q Consensus 636 ILl~~~~~vkL~DFGla~~~~~~--~~~~~~~~Gt~~y~aPE~l~~~~-------~s~~sDIwSLG~ll~elltG~~Pf~ 706 (782)
++++..+.+||+|||+....... ........-..-|.|||.+.+.. .+.+.||||+|++++|+++...||.
T Consensus 80 Clvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~ 159 (484)
T KOG1023|consen 80 CLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFD 159 (484)
T ss_pred ceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccc
Confidence 99999999999999998765321 00111112245789999998742 2557999999999999999999997
Q ss_pred CCC----hHHHHHHhhcccc---ccCCC--CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 707 NLN----SMQVIGAVGFMNQ---RLEIP--KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 707 ~~~----~~~~~~~i~~~~~---~~~~p--~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
... ..+.+..+..... ++.+. ...++++..++.+||..+|..||++..+...++.+..
T Consensus 160 ~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 160 LRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred cccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 532 2234444433122 22222 1456689999999999999999999999887776644
No 427
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.68 E-value=3e-16 Score=183.01 Aligned_cols=139 Identities=23% Similarity=0.313 Sum_probs=115.1
Q ss_pred cceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCC-H-----HHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYS-D-----EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~-~-----~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
..|...++||+|+||.||++.+.+..+++|+....... . .....+.+|+++++.++|++|+..+.++......+
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~ 412 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKT 412 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCE
Confidence 34566889999999999999998888777764332221 1 12356889999999999999988877777777889
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
+||||++|++|.+++. ....++.+++.+|.+||+.+ |+||||||+|||+ .++.++|+|||+++..
T Consensus 413 lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~g--iiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 413 IVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKAG--IVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhCC--CccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 9999999999999885 34568889999999999998 9999999999999 5779999999998653
No 428
>smart00090 RIO RIO-like kinase.
Probab=99.68 E-value=2.4e-16 Score=164.47 Aligned_cols=144 Identities=24% Similarity=0.236 Sum_probs=111.0
Q ss_pred ceeEeeeeccCCcEEEEEEE-E--cCCeEEEEEEeccCCC--------------------H--HHHHHHHHHHHHHHhCC
Q 003978 506 DLTIGEQIGQGSCGTVYHAV-W--YGSDVAVKVFSRQEYS--------------------D--EVIHSFRQEVSLMKRLR 560 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~-~--~~~~vAiK~~~~~~~~--------------------~--~~~~~~~~Ei~il~~l~ 560 (782)
-|.+.+.||+|+||.||+|. . .++.||||+++..... . .....+..|+.+++.+.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 58899999999999999998 3 6889999998754311 0 11234678999999997
Q ss_pred CC--ceeEEeeeeecCCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE
Q 003978 561 HP--NVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV 638 (782)
Q Consensus 561 Hp--nIv~l~~~~~~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl 638 (782)
+. .+++++++ ...++||||++|.+|...+... ..+....+..++.||+.+|.+||.+| .|+|+||||+||++
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~g-~iiH~Dikp~NIli 182 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD-VEPEEEEEFELYDDILEEMRKLYKEG-ELVHGDLSEYNILV 182 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccccc-CCcchHHHHHHHHHHHHHHHHHHhcC-CEEeCCCChhhEEE
Confidence 53 34455543 2358999999988887665332 34566677889999999999999865 49999999999999
Q ss_pred cCCCcEEEEecCCCcccc
Q 003978 639 DKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 639 ~~~~~vkL~DFGla~~~~ 656 (782)
+ ++.++|+|||++....
T Consensus 183 ~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 183 H-DGKVVIIDVSQSVELD 199 (237)
T ss_pred E-CCCEEEEEChhhhccC
Confidence 9 8899999999886443
No 429
>PF13426 PAS_9: PAS domain; PDB: 3ULF_B 3UE6_E 2Z6D_B 2Z6C_B 3P7N_B 1LL8_A 3MJQ_A 3BWL_A 4EET_B 4EEP_A ....
Probab=99.68 E-value=7.3e-16 Score=137.54 Aligned_cols=104 Identities=27% Similarity=0.522 Sum_probs=95.2
Q ss_pred CceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEcCCCCEEEEEE
Q 003978 140 GQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTEERVLVVA 219 (782)
Q Consensus 140 ~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~~v~~ 219 (782)
|+||+++|.+|+|+++|++|++++||++++++|+++.+++++.........+.+++..+..+..++.+++++|..+|+.+
T Consensus 1 p~~i~i~d~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~~~~ 80 (104)
T PF13426_consen 1 PDGIFILDPDGRILYVNPAFERLFGYSREELIGKSISDFFPEEDRPEFEEQIERALEEGGSWSGEVRLRRKDGETFWVEV 80 (104)
T ss_dssp -SEEEEEETTSBEEEE-HHHHHHHTS-HHHHTTSBGGGGCSTTSCHHHHHHHHHHHHHTSSEEEEEEEEETTSEEEEEEE
T ss_pred CEEEEEECCcCcEEehhHHHHHHHCcCHHHHcCCCcccccCcccchhhHHHHHHHHhcCCceeEEEEEEcCCCCEEEEEE
Confidence 68999999999999999999999999999999999999998776666677888999999999999999999999999999
Q ss_pred EEEEEECCCCCEEEEEEEEEehhH
Q 003978 220 TNTPFYDDDGTLVGIVCVSTDSRP 243 (782)
Q Consensus 220 ~~~Pi~d~~G~v~g~v~i~rDITe 243 (782)
++.|+.+++|++.+++++++|||+
T Consensus 81 ~~~~i~~~~g~~~~~i~~~~DiTe 104 (104)
T PF13426_consen 81 SASPIRDEDGEITGIIGIFRDITE 104 (104)
T ss_dssp EEEEEEETTSSEEEEEEEEEEEHH
T ss_pred EEEEEECCCCCEEEEEEEEEECCC
Confidence 999999999999999999999996
No 430
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.65 E-value=5.2e-16 Score=157.42 Aligned_cols=138 Identities=24% Similarity=0.218 Sum_probs=107.5
Q ss_pred ceeEeeeeccCCcEEEEEEEE-cCCeEEEEEEeccCCCH--------------------HHHHHHHHHHHHHHhCCCCc-
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW-YGSDVAVKVFSRQEYSD--------------------EVIHSFRQEVSLMKRLRHPN- 563 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~-~~~~vAiK~~~~~~~~~--------------------~~~~~~~~Ei~il~~l~Hpn- 563 (782)
.|.+.+.||+|+||.||++.. .++.||||++....... .....+..|+.++..+.|++
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 377889999999999999987 58899999976532110 11123667899999887774
Q ss_pred -eeEEeeeeecCCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC
Q 003978 564 -VLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW 642 (782)
Q Consensus 564 -Iv~l~~~~~~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~ 642 (782)
++.+++. ...+++|||++|++|..+... .....++.+++.++.++|+.+ |+|+||||+||+|+.++
T Consensus 96 ~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh~~g--i~H~Dl~p~Nill~~~~ 162 (198)
T cd05144 96 PVPKPIDW----NRHAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAYKHG--IIHGDLSEFNILVDDDE 162 (198)
T ss_pred CCCceeec----CCceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHHHCC--CCcCCCCcccEEEcCCC
Confidence 4455442 345899999999998766431 234567889999999999988 99999999999999999
Q ss_pred cEEEEecCCCcccc
Q 003978 643 TVKVGDFGLSRLKH 656 (782)
Q Consensus 643 ~vkL~DFGla~~~~ 656 (782)
.++|+|||++....
T Consensus 163 ~~~liDfg~~~~~~ 176 (198)
T cd05144 163 KIYIIDWPQMVSTD 176 (198)
T ss_pred cEEEEECCccccCC
Confidence 99999999985443
No 431
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.65 E-value=9.4e-17 Score=176.54 Aligned_cols=166 Identities=27% Similarity=0.399 Sum_probs=127.5
Q ss_pred ceeEEEeecCCCCHHHHHhhc--CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRN--TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 653 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~--~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~ 653 (782)
++||.|++|...+|.++|... ....++...+.++.|++.|+.| ++ .+|+|+||.||++..+..+||.|||+..
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~--~ihrdlkp~nif~~~d~q~kIgDFgl~t 404 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG--LIHRDLKPSNIFFSDDDQLKIGDFGLVT 404 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc--chhhhccccccccccchhhhhhhhhhee
Confidence 578999999999999999643 3446777888899999999999 66 9999999999999999999999999986
Q ss_pred cccccc------ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCC
Q 003978 654 LKHETY------LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEI 726 (782)
Q Consensus 654 ~~~~~~------~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~ 726 (782)
...... ......+||+.||+||.+.+..|+.++|||+||++|+|++. -..+|... ..+..+. ...+
T Consensus 405 s~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~---~t~~d~r----~g~i 477 (516)
T KOG1033|consen 405 SQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI---ATLTDIR----DGII 477 (516)
T ss_pred ecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH---Hhhhhhh----cCCC
Confidence 544332 23334579999999999999999999999999999999997 33333211 1111221 1222
Q ss_pred CC---CCCHHHHHHHHHhhhhCCCCCCCHH
Q 003978 727 PK---DVDPRWAAIVESCWHSDPQCRPSFQ 753 (782)
Q Consensus 727 p~---~~~~~l~~LI~~cL~~dP~~RPs~~ 753 (782)
|+ .=.++-..|+.+||.+.|.+||++-
T Consensus 478 p~~~~~d~p~e~~ll~~lls~~p~~RP~~~ 507 (516)
T KOG1033|consen 478 PPEFLQDYPEEYTLLQQLLSPSPEERPSAI 507 (516)
T ss_pred ChHHhhcCcHHHHHHHHhcCCCcccCchHH
Confidence 21 1224556899999999999999433
No 432
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.63 E-value=1.5e-17 Score=194.02 Aligned_cols=248 Identities=25% Similarity=0.359 Sum_probs=196.2
Q ss_pred ceeEeeeeccCCcEEEEEEEEc---CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCceeEEE
Q 003978 506 DLTIGEQIGQGSCGTVYHAVWY---GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~~---~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lv~ 581 (782)
.|.+.+.||+|+|+.|-..... ...+|+|.+...............|..+-+.+. |+|++.+++........++++
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 4666777999999999988653 233677776655434445566667888888886 999999999999999999999
Q ss_pred eecCCCCHHHHH-hhcCCcchHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCCcEEEcCCC-cEEEEecCCCccccc-
Q 003978 582 EFLPRGSLFRLL-QRNTTKLDWRRRILMALDIARGVSYLH-HCNPPIIHRDLKSSNLLVDKHW-TVKVGDFGLSRLKHE- 657 (782)
Q Consensus 582 E~~~ggsL~~~l-~~~~~~l~~~~~~~i~~qll~aL~~LH-~~~~~ivHrDIKp~NILl~~~~-~vkL~DFGla~~~~~- 657 (782)
+|..|+++++.+ .......+...+..++.|+..++.|+| ..+ +.|+||||+|.+++..+ .+++.|||+|.....
T Consensus 101 ~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~--~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~ 178 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG--VTHRDIKPSNSLLDESGSALKIADFGLATAYRNK 178 (601)
T ss_pred CcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc--cccCCCCCccchhccCCCcccCCCchhhcccccc
Confidence 999999999999 443325666777788899999999999 888 99999999999999999 999999999976544
Q ss_pred --ccccccCCCC-CCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH--hhcccc-ccCCCCCC
Q 003978 658 --TYLTTKTGKG-TPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGA--VGFMNQ-RLEIPKDV 730 (782)
Q Consensus 658 --~~~~~~~~~G-t~~y~aPE~l~~~~-~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~--i~~~~~-~~~~p~~~ 730 (782)
........+| ++.|+|||.+.+.. .....|+||.|+++.-+++|..||........... +..... .......+
T Consensus 179 ~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (601)
T KOG0590|consen 179 NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSI 258 (601)
T ss_pred CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCccccC
Confidence 2233445578 99999999999854 46789999999999999999999976654432111 111101 23344568
Q ss_pred CHHHHHHHHHhhhhCCCCCCCHHHH
Q 003978 731 DPRWAAIVESCWHSDPQCRPSFQEL 755 (782)
Q Consensus 731 ~~~l~~LI~~cL~~dP~~RPs~~el 755 (782)
+....+++.+++..+|..|.+.+++
T Consensus 259 ~~~~~~~l~k~l~~~~~~r~s~~~~ 283 (601)
T KOG0590|consen 259 SDQAHDLLHKILKENPSNRLSIEEL 283 (601)
T ss_pred ChhhhhcccccccCCchhccccccc
Confidence 8899999999999999999999988
No 433
>PF08448 PAS_4: PAS fold; InterPro: IPR013656 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. ; PDB: 3K3D_A 3K3C_B 3KX0_X 3FC7_B 3LUQ_D 3MXQ_A 3BWL_C 3FG8_A.
Probab=99.60 E-value=1.4e-14 Score=130.81 Aligned_cols=110 Identities=24% Similarity=0.357 Sum_probs=98.6
Q ss_pred HHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEcCCCCEE
Q 003978 136 LQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTEERV 215 (782)
Q Consensus 136 le~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~ 215 (782)
|++++++|+++|.+|+|+++|+++++++|++.++++|+++.+++++.........+.+++..+.....+..... +|..+
T Consensus 1 l~~~p~~i~v~D~~~~i~~~N~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 79 (110)
T PF08448_consen 1 LDSSPDGIFVIDPDGRIVYANQAAAELFGVSPEELIGRSLFDLLPPEDREEFQAALRRALAGGEPVFFEEILLR-DGEER 79 (110)
T ss_dssp HHHCSSEEEEEETTSBEEEE-HHHHHHHTSTHHHHTTSBHHHHSCCGCHHHHHHHHHHHHHHTSEEEEEEEECT-TSCEE
T ss_pred CCCCCceeEEECCCCEEEEEHHHHHHHhCCCHHHHhhccchhccccchhhhhHHHHHHhhccCceEEEEEEEee-cCCcE
Confidence 68999999999999999999999999999999999999999999887655566677888888888776666555 89999
Q ss_pred EEEEEEEEEECCCCCEEEEEEEEEehhHHHH
Q 003978 216 LVVATNTPFYDDDGTLVGIVCVSTDSRPFQE 246 (782)
Q Consensus 216 ~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~ 246 (782)
|+.+++.|++|.+|++.|++++++|||++|+
T Consensus 80 ~~~~~~~Pi~~~~g~~~g~~~~~~DiT~~rr 110 (110)
T PF08448_consen 80 WFEVSISPIFDEDGEVVGVLVIIRDITERRR 110 (110)
T ss_dssp EEEEEEEEEECTTTCEEEEEEEEEEECCHHH
T ss_pred EEEEEEEEeEcCCCCEEEEEEEEEECchhhC
Confidence 9999999999999999999999999999985
No 434
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.60 E-value=5.1e-15 Score=148.25 Aligned_cols=138 Identities=25% Similarity=0.230 Sum_probs=97.7
Q ss_pred eeeeccCCcEEEEEEEEc-CCeEEEEEEeccCCCHHHHHH----------------------HHHHHHHHHhCCCC--ce
Q 003978 510 GEQIGQGSCGTVYHAVWY-GSDVAVKVFSRQEYSDEVIHS----------------------FRQEVSLMKRLRHP--NV 564 (782)
Q Consensus 510 ~~~IG~G~~G~Vy~~~~~-~~~vAiK~~~~~~~~~~~~~~----------------------~~~Ei~il~~l~Hp--nI 564 (782)
++.||+|+||.||++... ++.||||++............ ...|...+..+.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 567999999999999876 888999998764322111111 13466666666433 24
Q ss_pred eEEeeeeecCCceeEEEeecCCCCHH-HHHhhcCCcchHHHHHHHHHHHHHHHHhhhc-CCCCeeecCCCCCcEEEcCCC
Q 003978 565 LLFMGAVTSPQRLCIVTEFLPRGSLF-RLLQRNTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHW 642 (782)
Q Consensus 565 v~l~~~~~~~~~~~lv~E~~~ggsL~-~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~-~~~~ivHrDIKp~NILl~~~~ 642 (782)
.++++. ...+++|||++++.+. ..+.... .. ..+..++.+++.++.++|. ++ |+|+||||+||+++ ++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh~~~~--ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLYREAG--LVHGDLSEYNILVD-DG 151 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHhhccC--cCcCCCChhhEEEE-CC
Confidence 445543 2458999999884332 1121111 11 5667888999999999999 88 99999999999999 88
Q ss_pred cEEEEecCCCccccc
Q 003978 643 TVKVGDFGLSRLKHE 657 (782)
Q Consensus 643 ~vkL~DFGla~~~~~ 657 (782)
.++|+|||.+.....
T Consensus 152 ~~~liDfg~a~~~~~ 166 (187)
T cd05119 152 KVYIIDVPQAVEIDH 166 (187)
T ss_pred cEEEEECcccccccC
Confidence 999999999864443
No 435
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.59 E-value=1.2e-14 Score=152.02 Aligned_cols=136 Identities=20% Similarity=0.221 Sum_probs=105.8
Q ss_pred eeec-cCCcEEEEEEEEcCCeEEEEEEeccCC-----------CHHHHHHHHHHHHHHHhCCCCce--eEEeeeeecCCc
Q 003978 511 EQIG-QGSCGTVYHAVWYGSDVAVKVFSRQEY-----------SDEVIHSFRQEVSLMKRLRHPNV--LLFMGAVTSPQR 576 (782)
Q Consensus 511 ~~IG-~G~~G~Vy~~~~~~~~vAiK~~~~~~~-----------~~~~~~~~~~Ei~il~~l~HpnI--v~l~~~~~~~~~ 576 (782)
..|| .|+.|+||.+...+..++||.+..... .......+.+|+.++..+.|++| +..+++......
T Consensus 37 ~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~ 116 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHG 116 (239)
T ss_pred ceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecC
Confidence 4576 788888998888899999999865332 11233567889999999998775 677766443222
Q ss_pred ----eeEEEeecCC-CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCC
Q 003978 577 ----LCIVTEFLPR-GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGL 651 (782)
Q Consensus 577 ----~~lv~E~~~g-gsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGl 651 (782)
.++|||+++| .+|.+++... .+++.. +.+|+.+|.+||++| |+|+||||.|||++.++.++|+|||.
T Consensus 117 ~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~~----~~~i~~~l~~lH~~G--I~HrDlkp~NILv~~~~~v~LIDfg~ 188 (239)
T PRK01723 117 LFYRADILIERIEGARDLVALLQEA--PLSEEQ----WQAIGQLIARFHDAG--VYHADLNAHNILLDPDGKFWLIDFDR 188 (239)
T ss_pred cceeeeEEEEecCCCCCHHHHHhcC--CCCHHH----HHHHHHHHHHHHHCC--CCCCCCCchhEEEcCCCCEEEEECCC
Confidence 3599999987 6899988653 344432 468999999999999 99999999999999988999999998
Q ss_pred Ccc
Q 003978 652 SRL 654 (782)
Q Consensus 652 a~~ 654 (782)
+..
T Consensus 189 ~~~ 191 (239)
T PRK01723 189 GEL 191 (239)
T ss_pred ccc
Confidence 864
No 436
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.58 E-value=1.1e-14 Score=138.57 Aligned_cols=135 Identities=19% Similarity=0.169 Sum_probs=111.8
Q ss_pred EeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCC--CceeEEeeeeecCCceeEEEeecCC
Q 003978 509 IGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRH--PNVLLFMGAVTSPQRLCIVTEFLPR 586 (782)
Q Consensus 509 i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~H--pnIv~l~~~~~~~~~~~lv~E~~~g 586 (782)
+.+.||.|.++.||++...+..+++|++..... ...+..|+.+++.+.| .++++++.+....+..+++|||+.+
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g 77 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKDEDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEG 77 (155)
T ss_pred cceecccccccceEEEEecCCeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCC
Confidence 457899999999999999888899999865432 3567889999999976 5899999988888889999999988
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCC-CCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 587 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCN-PPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 587 gsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~-~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
..+..+ +......++.+++.+|++||... .+++|+|++|.||++++.+.++++|||.+...
T Consensus 78 ~~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 78 ETLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred eecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 776544 34455667889999999999841 23999999999999999899999999988643
No 437
>PF00989 PAS: PAS fold; InterPro: IPR013767 PAS domains are involved in many signalling proteins where they are used as a signal sensor domain []. PAS domains appear in archaea, bacteria and eukaryotes. Several PAS-domain proteins are known to detect their signal by way of an associated cofactor. Haeme, flavin, and a 4-hydroxycinnamyl chromophore are used in different proteins. The PAS domain was named after three proteins that it occurs in: Per- period circadian protein Arnt- Ah receptor nuclear translocator protein Sim- single-minded protein. PAS domains are often associated with PAC domains IPR001610 from INTERPRO. It appears that these domains are directly linked, and that together they form the conserved 3D PAS fold. The division between the PAS and PAC domains is caused by major differences in sequences in the region connecting these two motifs []. In human PAS kinase, this region has been shown to be very flexible, and adopts different conformations depending on the bound ligand []. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels [].; GO: 0006355 regulation of transcription, DNA-dependent; PDB: 2GJ3_A 4F3L_B 1XFN_A 1OTD_A 2PYR_A 1KOU_A 1XFQ_A 2ZOI_A 2ZOH_A 1OTA_A ....
Probab=99.58 E-value=2e-14 Score=130.37 Aligned_cols=112 Identities=25% Similarity=0.438 Sum_probs=95.8
Q ss_pred HHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeE-EEEEEEE
Q 003978 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERW-TGQFPAK 208 (782)
Q Consensus 130 ~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~-~~e~~~~ 208 (782)
++|+.++++++++|+++|.+|+|+|+|++|+++|||+.++++|+++.+++++.........+...+..+... ..+....
T Consensus 1 e~~~~i~~~~~~~i~~~d~~g~I~~~N~a~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (113)
T PF00989_consen 1 ERYRAILENSPDGIFVIDEDGRILYVNQAAEELLGYSREELIGKSLFDLIHPEDRRELRERLRQALSQGESGESFEVRFR 80 (113)
T ss_dssp HHHHHHHHCSSSEEEEEETTSBEEEECHHHHHHHSS-HHHHTTSBGGGGCSGGGHHHHHHHHHHHHHHCCHECEEEEEEE
T ss_pred CHHHHHHhcCCceEEEEeCcCeEEEECHHHHHHHccCHHHHcCCcHHHhcCchhhHHHHHHHHHHHHcCCCceeEEEEEE
Confidence 579999999999999999999999999999999999999999999999998776444455677777777754 3344444
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEeh
Q 003978 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDS 241 (782)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDI 241 (782)
.++|..+|+.+.+.|+++.+|++.|++++++||
T Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~DI 113 (113)
T PF00989_consen 81 LRDGRPRWVEVRASPVRDEDGQIIGILVIFRDI 113 (113)
T ss_dssp ETTSCEEEEEEEEEEEEETTEEEEEEEEEEEE-
T ss_pred ecCCcEEEEEEEEEEEEeCCCCEEEEEEEEEeC
Confidence 579999999999999999999999999999997
No 438
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional
Probab=99.52 E-value=1.6e-13 Score=167.65 Aligned_cols=150 Identities=16% Similarity=0.158 Sum_probs=131.2
Q ss_pred HHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEE
Q 003978 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAK 208 (782)
Q Consensus 129 ~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~ 208 (782)
.++++.++++++++|+++|.+|+|+++|++|++++||+.++++|+++.+++++.............+..+..+..+....
T Consensus 154 ~~~l~~il~~~~~~i~~~D~~g~i~~~N~a~~~l~G~~~~eliG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 233 (779)
T PRK11091 154 SSLLRSFLDASPDLVYYRNEDGEFSGCNRAMELLTGKSEKQLIGLTPKDVYSPEAAEKVIETDEKVFRHNVSLTYEQWLD 233 (779)
T ss_pred HHHHHHHHhcCcceEEEECCCCcEEeEcHHHHHHhCcCHHHHcCCChHHhCCHHHHHHHHHHHHHHHhcCCCeEEEEEEE
Confidence 46799999999999999999999999999999999999999999999999887654444444566777788888888899
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHhhccccccccCCchhHHHHHhCCCchhHHHHHHH
Q 003978 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQATIA 287 (782)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~i~~~~~gl~~~l~~d~~qpL~~~i~ 287 (782)
+++|..+|+.++..|+++.+|++.|++++++|||++|+++++++.... .+..|++.++||++.||+.++.
T Consensus 234 ~~~G~~~~~~~~~~pi~~~~g~~~g~v~~~~DITe~k~~e~~l~~a~~---------~~~~~~a~isHelrtPL~~I~g 303 (779)
T PRK11091 234 YPDGRKACFELRKVPFYDRVGKRHGLMGFGRDITERKRYQDALEKASR---------DKTTFISTISHELRTPLNGIVG 303 (779)
T ss_pred cCCCCEEEEEEEeeeEEcCCCCEEEEEEEEeehhHHHHHHHHHHHHHH---------HHHHHHHHhhHhhcCcHHHHHH
Confidence 999999999999999999999999999999999999999998876532 2445999999999999987643
No 439
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.50 E-value=4.5e-14 Score=158.34 Aligned_cols=246 Identities=22% Similarity=0.168 Sum_probs=186.5
Q ss_pred ccceeEeeeecc--CCcEEEEEEEE----cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCc
Q 003978 504 WEDLTIGEQIGQ--GSCGTVYHAVW----YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQR 576 (782)
Q Consensus 504 ~~~y~i~~~IG~--G~~G~Vy~~~~----~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~ 576 (782)
-..+.+.+.+|. |.+|.||.+.. .+..+|+|.-+...........-.+|+...+.++ |+|.|+.+..|+..+.
T Consensus 113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~ 192 (524)
T KOG0601|consen 113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGI 192 (524)
T ss_pred hhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCc
Confidence 346778889999 99999999876 3456888763322221111223345666666664 9999999999999999
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHH----HHHhhhcCCCCeeecCCCCCcEEEcCC-CcEEEEecCC
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIAR----GVSYLHHCNPPIIHRDLKSSNLLVDKH-WTVKVGDFGL 651 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~----aL~~LH~~~~~ivHrDIKp~NILl~~~-~~vkL~DFGl 651 (782)
+|+-+|+| +.+|..+.......++...++....+... ||.++|..+ ++|-|+||+||++..+ ...+++|||+
T Consensus 193 lfiqtE~~-~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~--~~~~~~kp~~i~~~~~~~s~~~~df~~ 269 (524)
T KOG0601|consen 193 LFIQTELC-GESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNN--IVHDDLKPANIFTTSDWTSCKLTDFGL 269 (524)
T ss_pred ceeeeccc-cchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCc--ccccccchhheecccccceeecCCcce
Confidence 99999999 57888888776666888899999999999 999999999 9999999999999999 7789999999
Q ss_pred CcccccccccccCC-----CCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCC--ChHHHHHHhhcccccc
Q 003978 652 SRLKHETYLTTKTG-----KGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNL--NSMQVIGAVGFMNQRL 724 (782)
Q Consensus 652 a~~~~~~~~~~~~~-----~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~--~~~~~~~~i~~~~~~~ 724 (782)
.............. .|...|++||+..+. ++...|||+||.++.+..++..++... +....+... ....
T Consensus 270 v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l-~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~---~ip~ 345 (524)
T KOG0601|consen 270 VSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGL-ATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG---YIPL 345 (524)
T ss_pred eEEccCCccccceeeeecCCCCceEeChhhhccc-cchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc---cCch
Confidence 88766554333222 688999999998776 668999999999999999987665433 111111111 1223
Q ss_pred CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHH
Q 003978 725 EIPKDVDPRWAAIVESCWHSDPQCRPSFQELV 756 (782)
Q Consensus 725 ~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell 756 (782)
++....+.++...+.+||..+|..|++.+.+.
T Consensus 346 e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~ 377 (524)
T KOG0601|consen 346 EFCEGGSSSLRSVTSQMLDEDPRLRLTAQILT 377 (524)
T ss_pred hhhcCcchhhhhHHHHhcCcchhhhhHHHHHh
Confidence 33345567788899999999999999988774
No 440
>PRK13557 histidine kinase; Provisional
Probab=99.48 E-value=4.5e-13 Score=155.87 Aligned_cols=150 Identities=18% Similarity=0.230 Sum_probs=128.7
Q ss_pred HHHHHHHHHHcCceeEEEcC---CCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEE
Q 003978 129 DRQYLNILQSMGQSVHIFDL---SDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQF 205 (782)
Q Consensus 129 ~~~~~~ile~~~d~I~v~D~---dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~ 205 (782)
..+|+.+++.++++|+++|. +|+|+|+|++|++++||+.+|++|+++.+++++.........++..+..+..+..++
T Consensus 29 ~~~~~~~~~~~~~~i~v~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (540)
T PRK13557 29 SDIFFAAVETTRMPMIVTDPNQPDNPIVFANRAFLEMTGYAAEEIIGNNCRFLQGPETDRATVAEVRDAIAERREIATEI 108 (540)
T ss_pred hHHHHHHHHhCcCcEEEEcCCCCCCCEEEEcHHHHHHhCCCHHHhcCCChHhhcCCCCCHHHHHHHHHHHHcCCCceEEE
Confidence 47899999999999999995 789999999999999999999999999999887665555667788888888888888
Q ss_pred EEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHhhccccccccCCchhHHHHHhCCCchhHHHHH
Q 003978 206 PAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQAT 285 (782)
Q Consensus 206 ~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~i~~~~~gl~~~l~~d~~qpL~~~ 285 (782)
..++++|..+|+.+++.|+++.+|.+++++++.+|||+++++++++....... ....+...++|+.+.||+..
T Consensus 109 ~~~~~~G~~~~~~~~~~~i~~~~g~~~~~~~~~~dit~~~~~e~~l~~~~~~~-------~l~~~~~~i~h~l~~pl~~i 181 (540)
T PRK13557 109 LNYRKDGSSFWNALFVSPVYNDAGDLVYFFGSQLDVSRRRDAEDALRQAQKME-------ALGQLTGGIAHDFNNLLQVM 181 (540)
T ss_pred EEEeCCCCEEEEEEEEEEeECCCCCEEEEEEEecChHHHHHHHHHHHHHHHHH-------HhhhhhhhhhHHhhhHHHHH
Confidence 88899999999999999999999999999999999999999988876543221 12236777889999998753
No 441
>PRK13559 hypothetical protein; Provisional
Probab=99.48 E-value=6.1e-13 Score=147.38 Aligned_cols=144 Identities=19% Similarity=0.170 Sum_probs=120.7
Q ss_pred HHHHHHHHHHcCceeEEEcC---CCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEE
Q 003978 129 DRQYLNILQSMGQSVHIFDL---SDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQF 205 (782)
Q Consensus 129 ~~~~~~ile~~~d~I~v~D~---dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~ 205 (782)
.+.|+.+++.++++|+++|. +|.|+++|++|++++||+.++++|+++..+..+.........+...+..+..+..+.
T Consensus 42 ~~~~~~~~e~~~~~i~i~D~~~~~g~i~~~N~a~~~l~G~~~~e~iG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~ 121 (361)
T PRK13559 42 GRLFEQAMEQTRMAMCITDPHQPDLPIVLANQAFLDLTGYAAEEVVGRNCRFLQGAATDPIAVAKIRAAIAAEREIVVEL 121 (361)
T ss_pred hhHHHHHHHhCCCcEEEecCCCCCCcEEEEchHHHHHhCCCHHHHcCCChhhhcCCCCCHHHHHHHHHHhccCCceEEEE
Confidence 36688999999999999997 578999999999999999999999999877765544444455677788888888888
Q ss_pred EEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHhhccccccccCCchhHHHHHhCCCchhHHHHH
Q 003978 206 PAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQAT 285 (782)
Q Consensus 206 ~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~i~~~~~gl~~~l~~d~~qpL~~~ 285 (782)
..+++||..+|+.++..|+++.+|.+.+++++++|||+++++++.++.. ..++..++|+.+.||..+
T Consensus 122 ~~~~~dG~~~~~~~~~~~i~d~~G~~~~~v~~~~DITerk~~e~~~~~~-------------~~l~~~l~H~~~n~L~~i 188 (361)
T PRK13559 122 LNYRKDGEPFWNALHLGPVYGEDGRLLYFFGSQWDVTDIRAVRALEAHE-------------RRLAREVDHRSKNVFAVV 188 (361)
T ss_pred EEEcCCCCEEEEEEEEEEEEcCCCCEEEeeeeeeehhcchhhHHHHHHH-------------HHHHHHHHHhhhhHHHHH
Confidence 8899999999999999999999999999999999999999887654332 226667788888888653
No 442
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.40 E-value=5e-12 Score=143.13 Aligned_cols=222 Identities=21% Similarity=0.296 Sum_probs=147.5
Q ss_pred cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecCCCCHHHHHhhcCCcchHHHHH
Q 003978 527 YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRI 606 (782)
Q Consensus 527 ~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~ 606 (782)
.+.+|.|++++.... .......+-++.|+.++||||+++++.++..+.+|||+|-+. -|..+++.. ....+.
T Consensus 36 ~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l----~~~~v~ 107 (690)
T KOG1243|consen 36 DGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL----GKEEVC 107 (690)
T ss_pred cCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh----HHHHHH
Confidence 567788888876554 445567778899999999999999999999999999999983 677777643 255566
Q ss_pred HHHHHHHHHHHhhhc-CCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCch
Q 003978 607 LMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEK 685 (782)
Q Consensus 607 ~i~~qll~aL~~LH~-~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~ 685 (782)
..+.||+.||.|||. ++ ++|++|+-..|+|+..|.+||++|.++..............---.|..|+.+.... ..
T Consensus 108 ~Gl~qIl~AL~FL~~d~~--lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~--~s 183 (690)
T KOG1243|consen 108 LGLFQILAALSFLNDDCN--LVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE--WS 183 (690)
T ss_pred HHHHHHHHHHHHHhccCC--eeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccc--cc
Confidence 678899999999984 55 99999999999999999999999988754333221111112223466666554332 45
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhh-----ccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003978 686 SDVYSFGVILWELATEKIPWDNLNSMQVIGAVG-----FMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLR 760 (782)
Q Consensus 686 sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~-----~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~ 760 (782)
.|.|-|||++++++.|..+ ..........+. .......-.....+...+++..|...-+--|-.+-+++..|.
T Consensus 184 ~D~~~Lg~li~el~ng~~~--~~~~~~~~~~ipk~~~~~~~k~~~~~~~~r~n~~~~~~~~~~~~gff~n~fvd~~~fLe 261 (690)
T KOG1243|consen 184 IDSWGLGCLIEELFNGSLL--TKTDLSNTGKIPKALIELYCKKLGATELKRPNKLRFILECRLLGGFFRNDFVDTLLFLE 261 (690)
T ss_pred hhhhhHHHHHHHHhCcccC--cchhhhccCccchhHHHHHHHHhccccccccchhhHHHHHHhccccccchHHHHHHHHH
Confidence 7999999999999999332 111110000000 000000000111122556667777666666666666666666
Q ss_pred HH
Q 003978 761 DL 762 (782)
Q Consensus 761 ~L 762 (782)
+|
T Consensus 262 el 263 (690)
T KOG1243|consen 262 EL 263 (690)
T ss_pred hc
Confidence 65
No 443
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.37 E-value=1.9e-11 Score=131.14 Aligned_cols=260 Identities=15% Similarity=0.214 Sum_probs=177.0
Q ss_pred ceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeee------ec-CCce
Q 003978 506 DLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAV------TS-PQRL 577 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~------~~-~~~~ 577 (782)
-...++.||+|+-+.+|-.-.-+..| -|++........ . .-+..|... .||-+-.-+.|- -. ...+
T Consensus 12 ~i~~gr~LgqGgea~ly~l~e~~d~V-AKIYh~Pppa~~--a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~i 85 (637)
T COG4248 12 PIPPGRPLGQGGEADLYTLGEVRDQV-AKIYHAPPPAAQ--A---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVI 85 (637)
T ss_pred ccCCCccccCCccceeeecchhhchh-heeecCCCchHH--H---HHHHHhccCCCCcchhhhhcccHHHhhCCCcccee
Confidence 34567889999999999764433334 477765543221 1 112333333 466433212221 11 2237
Q ss_pred eEEEeecCCCCH-HHHHh-----hcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCC
Q 003978 578 CIVTEFLPRGSL-FRLLQ-----RNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGL 651 (782)
Q Consensus 578 ~lv~E~~~ggsL-~~~l~-----~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGl 651 (782)
.++|..+.|..- ..++. +....+.|...+.+++.|+.+.+.||..| .+-+|+.++|+||++++.|.|+|-..
T Consensus 86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G--h~vGDVn~~~~lVsd~~~V~LVdsDs 163 (637)
T COG4248 86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG--HVVGDVNQNSFLVSDDSKVVLVDSDS 163 (637)
T ss_pred EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC--CcccccCccceeeecCceEEEEcccc
Confidence 789999877633 22221 12234788999999999999999999999 89999999999999999999998764
Q ss_pred CcccccccccccCCCCCCcccCccccc-----CCCCCchhHHHHHHHHHHHHHcC-CCCCCCCCh-----HHHHHHhhc-
Q 003978 652 SRLKHETYLTTKTGKGTPQWMAPEVLR-----NEPSDEKSDVYSFGVILWELATE-KIPWDNLNS-----MQVIGAVGF- 719 (782)
Q Consensus 652 a~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~s~~sDIwSLG~ll~elltG-~~Pf~~~~~-----~~~~~~i~~- 719 (782)
-.. +.........+|.+.|.+||... +..-+...|.|.||+++|+++.| ++||.+... ......|..
T Consensus 164 fqi-~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g 242 (637)
T COG4248 164 FQI-NANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHG 242 (637)
T ss_pred eee-ccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcc
Confidence 332 23333344568999999999865 33346679999999999999987 999975421 001111111
Q ss_pred ------ccc------ccCCC-CCCCHHHHHHHHHhhhh--CCCCCCCHHHHHHHHHHHHHHHhhcccCcC
Q 003978 720 ------MNQ------RLEIP-KDVDPRWAAIVESCWHS--DPQCRPSFQELVDKLRDLQRQYFQASRSTV 774 (782)
Q Consensus 720 ------~~~------~~~~p-~~~~~~l~~LI~~cL~~--dP~~RPs~~ell~~L~~L~~~~~~~~~~~~ 774 (782)
... ...+| ..+++.+..|+.+|+.. ++.-|||++.++..|.++.++.-+|+++.+
T Consensus 243 ~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~C~v~a~ 312 (637)
T COG4248 243 RFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKKCTVSAM 312 (637)
T ss_pred eeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhhhhhccc
Confidence 011 11122 24789999999999973 467899999999999999999999988764
No 444
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.34 E-value=6.1e-13 Score=155.92 Aligned_cols=251 Identities=21% Similarity=0.231 Sum_probs=189.1
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 576 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 576 (782)
|....+.+.+.+.+-.|.++.++.+.-. +.-.++|+...... .....+....+-.++-...+|.++....-+.....
T Consensus 799 yrsS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP 878 (1205)
T KOG0606|consen 799 YRSSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSP 878 (1205)
T ss_pred ccCCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCC
Confidence 5666778899999999999999988643 22234443322111 11112333334444444567888877777777788
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
.+|+++|+.+++|...|...+ ..+..........++.+++|||... ++|+|++|.|+++..+|+.++.|||......
T Consensus 879 ~~L~~~~~~~~~~~Skl~~~~-~~saepaRs~i~~~vqs~e~L~s~~--r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg 955 (1205)
T KOG0606|consen 879 LPLVGHYLNGGDLPSKLHNSG-CLSAEPARSPILERVQSLESLHSSL--RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVG 955 (1205)
T ss_pred cchhhHHhccCCchhhhhcCC-CcccccccchhHHHHhhhhccccch--hhcccccccchhhcccCCcccCccccccccc
Confidence 999999999999999997654 4555555566668889999999977 8999999999999999999999998432111
Q ss_pred cc-------------------------------cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCC
Q 003978 657 ET-------------------------------YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPW 705 (782)
Q Consensus 657 ~~-------------------------------~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf 705 (782)
.. ........||+.|.+||.+.+......+|+|++|+++++.++|..||
T Consensus 956 ~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~ 1035 (1205)
T KOG0606|consen 956 LIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPF 1035 (1205)
T ss_pred cccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCC
Confidence 00 01122346999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHhhccc-cccCCCCCCCHHHHHHHHHhhhhCCCCCCCHH
Q 003978 706 DNLNSMQVIGAVGFMN-QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQ 753 (782)
Q Consensus 706 ~~~~~~~~~~~i~~~~-~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ 753 (782)
......++.+.+.... .++.-+...+++.++++.+.|..+|.+|..+.
T Consensus 1036 na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1036 NAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 9999888887774322 24455567899999999999999999998765
No 445
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.33 E-value=7.2e-12 Score=142.13 Aligned_cols=147 Identities=22% Similarity=0.246 Sum_probs=98.1
Q ss_pred ccceeEeeeeccCCcEEEEEEEE-cCCeEEEEEEeccCCCH--------------------------------HHHH---
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW-YGSDVAVKVFSRQEYSD--------------------------------EVIH--- 547 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~-~~~~vAiK~~~~~~~~~--------------------------------~~~~--- 547 (782)
+..|. .+.||.|++|.||+|+. .|+.||||+.++..... +...
T Consensus 117 F~~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~ 195 (437)
T TIGR01982 117 FAEFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLR 195 (437)
T ss_pred HhhCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHH
Confidence 34444 36799999999999987 68899999986532100 0000
Q ss_pred ---HHHHHHHHHHhCC-----CCceeEEeeeeecCCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHH-HHHh
Q 003978 548 ---SFRQEVSLMKRLR-----HPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIAR-GVSY 618 (782)
Q Consensus 548 ---~~~~Ei~il~~l~-----HpnIv~l~~~~~~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~-aL~~ 618 (782)
.+.+|.+.+..+. +++|.-..-++......+|||||++|++|.++......... ...++..++. .+..
T Consensus 196 ~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~q 272 (437)
T TIGR01982 196 RELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQ 272 (437)
T ss_pred HHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHH
Confidence 1344555555542 34432221122223456899999999999887653222222 2334555555 4678
Q ss_pred hhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 619 LHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 619 LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
+|..| ++|+|+||.||+++.++.++|+|||++....
T Consensus 273 l~~~g--~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 273 VLRDG--FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHhCC--ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 89888 9999999999999999999999999987554
No 446
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.30 E-value=2.6e-12 Score=133.62 Aligned_cols=199 Identities=24% Similarity=0.392 Sum_probs=142.9
Q ss_pred HHHHhCCCCceeEEeeeeecCC-----ceeEEEeecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHhhhcCCCC
Q 003978 554 SLMKRLRHPNVLLFMGAVTSPQ-----RLCIVTEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPP 625 (782)
Q Consensus 554 ~il~~l~HpnIv~l~~~~~~~~-----~~~lv~E~~~ggsL~~~l~~---~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ 625 (782)
.-|-.+.|.|||+++.+|.+.. ...++.|||.-|+|..+|++ +...+......+|+-||+.||.|||+..++
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 3444557999999999986543 47889999999999999964 445578888889999999999999999999
Q ss_pred eeecCCCCCcEEEcCCCcEEEEecCCCcccccc-----cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc
Q 003978 626 IIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET-----YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT 700 (782)
Q Consensus 626 ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~-----~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt 700 (782)
|+|+++..+.|++..+|-||+.--.... .+.. ........+-+.|.+||.=.....+.++|||++|+..++|.-
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s-~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDS-THPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccc-cchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence 9999999999999999999874221111 1110 111222346788999998666667789999999999999988
Q ss_pred CCCC-CCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003978 701 EKIP-WDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDK 758 (782)
Q Consensus 701 G~~P-f~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~ 758 (782)
+..- -.......+...+.... ...-+..-+++|.+||+..|..||++++++-+
T Consensus 278 lEiq~tnseS~~~~ee~ia~~i-----~~len~lqr~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 278 LEIQSTNSESKVEVEENIANVI-----IGLENGLQRGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred heeccCCCcceeehhhhhhhhe-----eeccCccccCcCcccccCCCCCCcchhhhhcC
Confidence 7653 22222222222221111 11112333678999999999999999998654
No 447
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.30 E-value=3.3e-12 Score=146.74 Aligned_cols=146 Identities=21% Similarity=0.234 Sum_probs=94.6
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCC---------------------------C-----HHHH
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY---------------------------S-----DEVI 546 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~---------------------------~-----~~~~ 546 (782)
+..+..|.. +.||.|++|.||+|+.+ |+.||||+.++... . .+..
T Consensus 116 ~~~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~ 194 (537)
T PRK04750 116 EEWFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFE 194 (537)
T ss_pred HHHHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHH
Confidence 445667887 89999999999999973 78999999975421 0 0122
Q ss_pred HHHHHHHHH------HHhCC----CCceeEEeeee-ecCCceeEEEeecCCCCHHHH--HhhcCC---cchHHHHHHHHH
Q 003978 547 HSFRQEVSL------MKRLR----HPNVLLFMGAV-TSPQRLCIVTEFLPRGSLFRL--LQRNTT---KLDWRRRILMAL 610 (782)
Q Consensus 547 ~~~~~Ei~i------l~~l~----HpnIv~l~~~~-~~~~~~~lv~E~~~ggsL~~~--l~~~~~---~l~~~~~~~i~~ 610 (782)
+.+.+|+.+ +..+. +.+.+.+-.++ .--...+||||||+|+.|.++ +...+. .+....+..++.
T Consensus 195 ~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~ 274 (537)
T PRK04750 195 KTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFT 274 (537)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 233334333 33331 22222222222 112345799999999999775 333221 244444455555
Q ss_pred HHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC----cEEEEecCCCcccc
Q 003978 611 DIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW----TVKVGDFGLSRLKH 656 (782)
Q Consensus 611 qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~----~vkL~DFGla~~~~ 656 (782)
|++ ..| ++|+|+||.||+|+.++ .++++|||++....
T Consensus 275 Qif-------~~G--ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 275 QVF-------RDG--FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred HHH-------hCC--eeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 554 467 99999999999999888 99999999986543
No 448
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.29 E-value=2.3e-12 Score=144.71 Aligned_cols=246 Identities=19% Similarity=0.143 Sum_probs=178.2
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc---CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCcee
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY---GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~---~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~ 578 (782)
...+|.++..||.|.|+.||++... +..|++|.+.........-..-..|+.+...+ -|.+++.++..|......|
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 4568999999999999999998753 45588887765544332222333466666666 4889999999888888889
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC-CcEEEEecCCCccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH-WTVKVGDFGLSRLKHE 657 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~-~~vkL~DFGla~~~~~ 657 (782)
+-.|||.++++...+. -...+.+...+.+..|++.++.++|+.. ++|+|+||+||++..+ +.-++.|||+.....-
T Consensus 343 ip~e~~~~~s~~l~~~-~~~~~d~~~~~~~~~q~~~~l~~i~s~~--~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~ 419 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRSV-TSQMLDEDPRLRLTAQILTALNVIHSKL--FVHLDVKPSNILISNDGFFSKLGDFGCWTRLAF 419 (524)
T ss_pred CchhhhcCcchhhhhH-HHHhcCcchhhhhHHHHHhccccccchh--hhcccccccceeeccchhhhhccccccccccce
Confidence 9999999998876662 2334777888899999999999999988 9999999999999886 7789999998764211
Q ss_pred ccccccCCCCCCcc-cCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHH
Q 003978 658 TYLTTKTGKGTPQW-MAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 736 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y-~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~ 736 (782)
. .......+..| .++.......+..+.|++|||..+.+.+++..--...... ...........+....++..
T Consensus 420 ~--~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~-----~~i~~~~~p~~~~~~~~~q~ 492 (524)
T KOG0601|consen 420 S--SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQS-----LTIRSGDTPNLPGLKLQLQV 492 (524)
T ss_pred e--cccccccccccccchhhccccccccccccccccccccccccCcccCcccccc-----eeeecccccCCCchHHhhhh
Confidence 1 11111223344 3555666677788999999999999999986532222211 11122223333444488899
Q ss_pred HHHHhhhhCCCCCCCHHHHHHH
Q 003978 737 IVESCWHSDPQCRPSFQELVDK 758 (782)
Q Consensus 737 LI~~cL~~dP~~RPs~~ell~~ 758 (782)
+.+.++..++..||.+.++..+
T Consensus 493 ~~kv~~~~~~~~~~l~~~l~~~ 514 (524)
T KOG0601|consen 493 LLKVMINPDRKRRPSAVELSLH 514 (524)
T ss_pred hhhhhcCCccccchhhhhhccc
Confidence 9999999999999998888544
No 449
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.29 E-value=9.7e-12 Score=122.18 Aligned_cols=129 Identities=16% Similarity=0.101 Sum_probs=95.7
Q ss_pred eeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCce-eEEeeeeecCCceeEEEeecCCCC
Q 003978 510 GEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNV-LLFMGAVTSPQRLCIVTEFLPRGS 588 (782)
Q Consensus 510 ~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnI-v~l~~~~~~~~~~~lv~E~~~ggs 588 (782)
++.|+.|.++.||++...+..|++|+...... ....+..|+.+++.+.+.++ ++++.+.. ...++||||++|.+
T Consensus 3 ~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~ 77 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVANKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSE 77 (170)
T ss_pred eeecCCcccCceEEEEECCeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCc
Confidence 46789999999999999999999999755431 11245678888888865443 45555443 34589999999987
Q ss_pred HHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCC---CeeecCCCCCcEEEcCCCcEEEEecCCCc
Q 003978 589 LFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNP---PIIHRDLKSSNLLVDKHWTVKVGDFGLSR 653 (782)
Q Consensus 589 L~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~---~ivHrDIKp~NILl~~~~~vkL~DFGla~ 653 (782)
+.... . ....++.+++.+|+.||..+. .++|+|++|.||+++ ++.++|+|||.+.
T Consensus 78 l~~~~------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 78 LLTED------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred ccccc------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 75430 0 112345689999999998761 249999999999999 6689999999875
No 450
>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL. NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes.
Probab=99.26 E-value=2.4e-11 Score=139.27 Aligned_cols=126 Identities=18% Similarity=0.298 Sum_probs=111.1
Q ss_pred HHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEE
Q 003978 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAK 208 (782)
Q Consensus 129 ~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~ 208 (782)
.+.|+.+++.++++|+++|.+|+|+|+|+++++++||++++++|++...+..+.........++..+..+..+..+....
T Consensus 3 ~~~~~~i~~~~~~~i~~~d~~g~~~~~N~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (494)
T TIGR02938 3 PEAYRQTVDQAPLAISITDLKANILYANDAFTRITGYTKEEIIGKNESVLSNHTTPPEVYQALWGSLAEQKPWAGKLLNR 82 (494)
T ss_pred hHHHHHHHHhCCceEEEECCCCcEEEEchhheeecCCCHHHHhCCCchhhcCCCCCHHHHHHHHHHHHhCCcccceeecc
Confidence 46799999999999999999999999999999999999999999987777665554444556677777888888888888
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHh
Q 003978 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDT 254 (782)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~ 254 (782)
+++|..+|+...+.|+++.+|.+.+++++++|||++++++++|+..
T Consensus 83 ~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIt~~k~~e~~l~~~ 128 (494)
T TIGR02938 83 RKDGELYLAELTVAPVLNEAGETTHFLGMHRDITELHRLEQVVANQ 128 (494)
T ss_pred CCCccchhhheeeEEEECCCCCEEEEEEehhhhhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999887653
No 451
>TIGR00229 sensory_box PAS domain S-box. The PAS domain was previously described. This sensory box, or S-box domain occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include heme in the oxygen sensor FixL, FAD in the redox potential sensor NifL, and a 4-hydroxycinnamyl chromophore in photoactive yellow protein. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator.
Probab=99.25 E-value=1.1e-10 Score=101.67 Aligned_cols=120 Identities=23% Similarity=0.396 Sum_probs=97.4
Q ss_pred HHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCC-eEEEEEEEE
Q 003978 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGE-RWTGQFPAK 208 (782)
Q Consensus 130 ~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~-~~~~e~~~~ 208 (782)
+.++.+++.++++++++|.+|.|+++|+++++++|++..+++|+.+..++++.........+...+..+. .......+.
T Consensus 3 ~~~~~~~~~~~~~~~~~d~~~~i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (124)
T TIGR00229 3 ERYRAIFESSPDAIIVIDLEGNILYVNPAFEEIFGYSAEELIGRNVLELIPEEDREEVRERIERLLEGEREPVSEERRVR 82 (124)
T ss_pred hHHHHHHhhCCceEEEEcCCCcEEEEchHHHHHhCCChHHhcCcchhhhcChhhhHHHHHHHHHHHcCCCCCcceEeeeE
Confidence 5688999999999999999999999999999999999999999999887766554333333444454332 234445556
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHH
Q 003978 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAA 250 (782)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~ 250 (782)
.++|..+|+..+..|+. .+|.+.++++++.|||++++++++
T Consensus 83 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dit~~~~~~~~ 123 (124)
T TIGR00229 83 RKDGSEIWVEVSVSPIR-TNGGELGVVGIVRDITERKQAEEA 123 (124)
T ss_pred cCCCCEEEEEEEEeehh-hCCCeeEEEEEeeehhHHHHHHhc
Confidence 88999999999999998 788899999999999999988764
No 452
>PRK13560 hypothetical protein; Provisional
Probab=99.21 E-value=1.4e-10 Score=141.70 Aligned_cols=127 Identities=15% Similarity=0.134 Sum_probs=105.8
Q ss_pred HHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEE
Q 003978 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAK 208 (782)
Q Consensus 129 ~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~ 208 (782)
.+.|+.++++++++|+++|.+|+|+++|+++++++||+.+|++|+++.+++++.............+..+.....+..+.
T Consensus 203 ~~~l~~l~e~~~~~i~~~d~~g~i~~~N~~~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 282 (807)
T PRK13560 203 LHFLQQLLDNIADPAFWKDEDAKVFGCNDAACLACGFRREEIIGMSIHDFAPAQPADDYQEADAAKFDADGSQIIEAEFQ 282 (807)
T ss_pred HHHHHHHHhhCCCeEEEEcCCCCEEEEhHHHHHHhCCCHHHHcCCcchhcCCcchhHHHHHHHHHHhccCCceEEEEEEE
Confidence 45688999999999999999999999999999999999999999999998876543222223345556666677788889
Q ss_pred cCCCCEEEEEE--EEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHhh
Q 003978 209 TKTEERVLVVA--TNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTK 255 (782)
Q Consensus 209 ~kdG~~~~v~~--~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~ 255 (782)
++||..+|+.+ +..|+.+.+|.+.|++++++|||++|++|++|+...
T Consensus 283 ~~dG~~~~~~~~~~~~~~~~~~g~~~g~~~~~~DITerk~~e~~L~~se 331 (807)
T PRK13560 283 NKDGRTRPVDVIFNHAEFDDKENHCAGLVGAITDISGRRAAERELLEKE 331 (807)
T ss_pred cCCCCEEEEEEEecceEEEcCCCCEEEEEEEEEechHHHHHHHHHHHHH
Confidence 99999996655 456778999999999999999999999999986543
No 453
>PRK10060 RNase II stability modulator; Provisional
Probab=99.20 E-value=2.7e-10 Score=136.52 Aligned_cols=133 Identities=17% Similarity=0.230 Sum_probs=106.8
Q ss_pred HHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCcccccccccc-ccHHHHHHHHHHcCCeEEEEEEE
Q 003978 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRD-FDVAYDIVHRIKMGERWTGQFPA 207 (782)
Q Consensus 129 ~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~-~~~~~~l~~~l~~g~~~~~e~~~ 207 (782)
..+++.+++.++++|+++|.+|+|+++|+++++++||+.++++|+++.+++.+... ......+...+..+..+..+.++
T Consensus 110 ~~~~~~v~~~~~~gI~i~D~~g~I~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 189 (663)
T PRK10060 110 LSFAEQVVSEANSVIVILDSRGNIQRFNRLCEEYTGLKEHDVIGQSVFKLFMSRREAAASRRNIRGFFRSGNAYEVERWI 189 (663)
T ss_pred HHHHHHHHhhCCceEEEEeCCCCEEEEcHHHHHHHCcCHHHHcCCCHHHHhCChhhHHHHHHHHHHHHhcCCceEEEEEE
Confidence 35677899999999999999999999999999999999999999999887654432 22333456677888889999999
Q ss_pred EcCCCCEEEEEEEEEEEECCCC-CEEEEEEEEEehhHHHHHHHHHHHhhccccccc
Q 003978 208 KTKTEERVLVVATNTPFYDDDG-TLVGIVCVSTDSRPFQETRAALWDTKNSDTDSN 262 (782)
Q Consensus 208 ~~kdG~~~~v~~~~~Pi~d~~G-~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~ 262 (782)
.+++|..+|+.....+ .+.+| ...+++++.+|||++++++++|+.....+..+.
T Consensus 190 ~~~~G~~~~~~~~~~~-~~~~g~~~~~~i~~~~DITe~k~~e~~l~~~a~~D~LTG 244 (663)
T PRK10060 190 KTRKGQRLFLFRNKFV-HSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITG 244 (663)
T ss_pred EeCCCCEEEEEeeeEE-EcCCCCceEEEEEEEEechHHHHHHHHHHHHhhcCccCC
Confidence 9999999987765544 44444 446788999999999999999988766555443
No 454
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.20 E-value=1.7e-10 Score=112.63 Aligned_cols=133 Identities=26% Similarity=0.350 Sum_probs=103.2
Q ss_pred eeeccCCcEEEEEEEEcCCeEEEEEEeccCCC-HH-----HHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeec
Q 003978 511 EQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYS-DE-----VIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFL 584 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~-~~-----~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~ 584 (782)
..|++|+-+.+|.+.+.+.++++|.=.++.+. ++ ...+..+|.+++..++--.|.-.+=+..++....|+|||+
T Consensus 2 ~~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred chhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 35789999999999999988888875444442 21 2345677999999886555544444555667788999999
Q ss_pred CCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 585 PRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 585 ~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
+|..|.+.+... ...++..+-.-+.-||..| |||+||.++||++..++ +.++|||++..
T Consensus 82 ~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH~~g--ivHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 82 EGELLKDALEEA--------RPDLLREVGRLVGKLHKAG--IVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CChhHHHHHHhc--------chHHHHHHHHHHHHHHhcC--eecCCCccceEEEeCCc-EEEEECCcccc
Confidence 998999899765 1345666777788899999 99999999999999874 99999999863
No 455
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.19 E-value=1.6e-10 Score=116.45 Aligned_cols=138 Identities=20% Similarity=0.179 Sum_probs=98.2
Q ss_pred eeeccCCcEEEEEEEEc--------CCeEEEEEEeccCC--------------------CHHHHHH----HHHHHHHHHh
Q 003978 511 EQIGQGSCGTVYHAVWY--------GSDVAVKVFSRQEY--------------------SDEVIHS----FRQEVSLMKR 558 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~~--------~~~vAiK~~~~~~~--------------------~~~~~~~----~~~Ei~il~~ 558 (782)
..||.|--+.||.|... +..+|||+++.... ...-.+. ..+|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 46899999999999754 36899999853110 0011222 3379999998
Q ss_pred CCC--CceeEEeeeeecCCceeEEEeecCCCCHHH-HHhhcCCcchHHHHHHHHHHHHHHHHhh-hcCCCCeeecCCCCC
Q 003978 559 LRH--PNVLLFMGAVTSPQRLCIVTEFLPRGSLFR-LLQRNTTKLDWRRRILMALDIARGVSYL-HHCNPPIIHRDLKSS 634 (782)
Q Consensus 559 l~H--pnIv~l~~~~~~~~~~~lv~E~~~ggsL~~-~l~~~~~~l~~~~~~~i~~qll~aL~~L-H~~~~~ivHrDIKp~ 634 (782)
+.. -+++.++++ ...+|||||+.+..+.. .+.. ..++......+..+++.+|..| |..| |||+||++.
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd--~~~~~~~~~~i~~~i~~~l~~l~H~~g--lVHGDLs~~ 154 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD--AKLNDEEMKNAYYQVLSMMKQLYKECN--LVHADLSEY 154 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc--cccCHHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHH
Confidence 853 456667764 45689999997644422 2222 1344455667788999999999 8888 999999999
Q ss_pred cEEEcCCCcEEEEecCCCccccc
Q 003978 635 NLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 635 NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|||+.. +.++|+|||.+.....
T Consensus 155 NIL~~~-~~v~iIDF~qav~~~h 176 (197)
T cd05146 155 NMLWHD-GKVWFIDVSQSVEPTH 176 (197)
T ss_pred HEEEEC-CcEEEEECCCceeCCC
Confidence 999974 6899999998865543
No 456
>TIGR02040 PpsR-CrtJ transcriptional regulator PpsR. This model represents the transcriptional regulator PpsR which is strictly associated with photosynthetic proteobacteria and found in photosynthetic operons. PpsR has been reported to be a repressor. These proteins contain a Helix-Turn_Helix motif of the "fis" type (pfam02954).
Probab=99.18 E-value=2.1e-10 Score=130.94 Aligned_cols=114 Identities=14% Similarity=0.004 Sum_probs=91.1
Q ss_pred HHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCC-hhhHcCCCccccccccccccHHHHHHHHHHc-CCeEEEEEEEE
Q 003978 131 QYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYS-AEEALGQDAIELLTDGRDFDVAYDIVHRIKM-GERWTGQFPAK 208 (782)
Q Consensus 131 ~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys-~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~-g~~~~~e~~~~ 208 (782)
.|+.++++++++|+++|.+|+|+++|++|++|+||+ .++++|+++.+++.+... ....+...+.. |.....+....
T Consensus 253 ~~~~l~e~~~d~I~v~D~~G~I~~~N~a~~~l~G~~~~~~l~G~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~ 330 (442)
T TIGR02040 253 NLARLYHEAPDAIVFSDADGTIRGANEAFLELTDSSSLEAVRGRTLDRWLGRGGV--DLRVLLSNVRRTGQVRLYATTLT 330 (442)
T ss_pred HHHHHHHhCCceEEEEcCCCcEEehhHHHHHHhCCCChHHHcCCCHHHHhCCCcc--cHHHHHHHHhhcCceEEEEEEEE
Confidence 589999999999999999999999999999999997 578999999887764322 12333444443 44444566778
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHH
Q 003978 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETR 248 (782)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E 248 (782)
+++|..+|+.+++.|+.+.++ ..++++++|||+|++.+
T Consensus 331 ~~~G~~~~ve~s~~~i~~~~~--~~~~~v~rDITeR~~~~ 368 (442)
T TIGR02040 331 GEFGAQTEVEISAAWVDQGER--PLIVLVIRDISRRLTMR 368 (442)
T ss_pred cCCCCEEEEEEEEEEeccCCc--eEEEEEEecchhhccCC
Confidence 999999999999999986555 45788999999998774
No 457
>PRK11073 glnL nitrogen regulation protein NR(II); Provisional
Probab=99.18 E-value=1.5e-10 Score=127.55 Aligned_cols=144 Identities=15% Similarity=0.070 Sum_probs=113.2
Q ss_pred HHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEE
Q 003978 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAK 208 (782)
Q Consensus 129 ~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~ 208 (782)
...++.+|+++++||+++|.+|+|+++|++|++++||+.++++|+++.++++.... ....+...+..+..+......+
T Consensus 6 ~~~~~~il~~~~~gi~~~d~~~~i~~~N~a~~~~~g~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 83 (348)
T PRK11073 6 LPDAGQILNSLINSILLLDDDLAIHYANPAAQQLLAQSSRKLFGTPLPELLSYFSL--NIELMRESLQAGQGFTDNEVTL 83 (348)
T ss_pred cchHHHHHhcCcCeEEEECCCCeEeeEcHHHHHHhCCCHHHHcCCCHHHHcCcchh--hHHHHHHHHHcCCcccccceEE
Confidence 35689999999999999999999999999999999999999999999998865331 1234456677776655444555
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHhhccccccccCCchhHHHHHhCCCchhHHHHHH
Q 003978 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQATI 286 (782)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~i~~~~~gl~~~l~~d~~qpL~~~i 286 (782)
.++|..+|+.++..|+. . .+++..++|||+++++++++....... ....+...++||++.||..+.
T Consensus 84 ~~~g~~~~~~~~~~~~~--~---~~~~~~~~dit~~~~~~~~~~~~~~~~-------~~~~~~~~iaHelr~pL~~i~ 149 (348)
T PRK11073 84 VIDGRSHILSLTAQRLP--E---GMILLEMAPMDNQRRLSQEQLQHAQQV-------AARDLVRGLAHEIKNPLGGLR 149 (348)
T ss_pred EECCceEEEEEEEEEcc--C---ceeEEEEechhHHHHHHHHHHHHHHHH-------HHHHHHHhhhHhhcChHHHHH
Confidence 67999999999999987 2 246778999999999888775543321 123488899999999998754
No 458
>PRK13558 bacterio-opsin activator; Provisional
Probab=99.18 E-value=3.4e-10 Score=136.02 Aligned_cols=127 Identities=22% Similarity=0.259 Sum_probs=112.0
Q ss_pred HHHHHHHHHcCceeEEEcC---CCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEE
Q 003978 130 RQYLNILQSMGQSVHIFDL---SDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFP 206 (782)
Q Consensus 130 ~~~~~ile~~~d~I~v~D~---dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~ 206 (782)
+.++.+++..+++|+++|. +|.|+|+|+++++++||+.++++|+++..++++.........+...+..+..+..+++
T Consensus 148 r~~~~~~~~~~~gi~~~d~~~~dg~i~~~N~~~~~l~G~~~eel~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 227 (665)
T PRK13558 148 RLKERALDEAPVGITIADATLPDEPLIYINDAFERITGYSPDEVLGRNCRFLQGEDTNEERVAELREAIDEERPTSVELR 227 (665)
T ss_pred HHHHHHHhcCCccEEEEcCCCCCCcEEEEcHHHHHHhCcCHHHHcCCCHHHhcCCCccHHHHHHHHHHHhcCCCeEEEEE
Confidence 3467899999999999984 7999999999999999999999999998888766554455567778888888888999
Q ss_pred EEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHhhc
Q 003978 207 AKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKN 256 (782)
Q Consensus 207 ~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~ 256 (782)
.++++|..+|+.++..|+++.+|.+.+++++++|||++|++|++++....
T Consensus 228 ~~~~dG~~~~~~~~~~pi~d~~G~~~~~vgi~~DITerk~~E~~L~~~~~ 277 (665)
T PRK13558 228 NYRKDGSTFWNQVDIAPIRDEDGTVTHYVGFQTDVTERKEAELALQRERR 277 (665)
T ss_pred EECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEeCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999876443
No 459
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.12 E-value=8e-10 Score=107.47 Aligned_cols=145 Identities=23% Similarity=0.210 Sum_probs=108.2
Q ss_pred EeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCH------HHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 509 IGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSD------EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 509 i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~------~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
.+..|-+|+-+.|+++.+.|+.+.||.=..+.+.. -..++.++|+++|.++.--.|.-..-++.+...-.|+||
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME 90 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME 90 (229)
T ss_pred cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence 45678899999999999999999998744433322 234577889999998864444444444555566788999
Q ss_pred ecCC-CCHHHHHhhcCCcc-hHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC---cEEEEecCCCccc
Q 003978 583 FLPR-GSLFRLLQRNTTKL-DWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW---TVKVGDFGLSRLK 655 (782)
Q Consensus 583 ~~~g-gsL~~~l~~~~~~l-~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~---~vkL~DFGla~~~ 655 (782)
|++| .++.+++......- .......++..|-..+.-||..+ |||+||..+||++..++ .+.|+|||++...
T Consensus 91 ~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd--iiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 91 FIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND--IIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred eccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC--eecccccccceEEecCCCcCceEEEeecchhcc
Confidence 9977 47888886543332 33333678889999999999999 99999999999997654 3589999998643
No 460
>PRK09776 putative diguanylate cyclase; Provisional
Probab=99.10 E-value=1.3e-09 Score=138.10 Aligned_cols=134 Identities=20% Similarity=0.199 Sum_probs=110.0
Q ss_pred CHHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCcccccccccc--ccHHHHHHHHHHcCCe--EEE
Q 003978 128 TDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRD--FDVAYDIVHRIKMGER--WTG 203 (782)
Q Consensus 128 ~~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~--~~~~~~l~~~l~~g~~--~~~ 203 (782)
.++.++.++++++++|+++|.+|+|+++|+++++++||+.+|++|+++.++++.... ......+......+.. ...
T Consensus 534 ~~~~l~~~l~~~~~~i~~~D~~g~i~~~N~a~~~l~G~~~~e~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (1092)
T PRK09776 534 EKERLHITLDSIGEAVVCTDMAMKVTFMNPVAEKMTGWTQEEALGVPLLTVLHITFGDNGPLMENIYSCLTSRSAAYLEQ 613 (1092)
T ss_pred HHHHHHHHHhccccEEEEECCCCeEEEEcHHHHHHhCCCHHHHcCCCHHHHcccccCCcchhhHHHHHHHhcCCCccccc
Confidence 356688899999999999999999999999999999999999999999887754322 1222234444444443 456
Q ss_pred EEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHhhcccccc
Q 003978 204 QFPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDS 261 (782)
Q Consensus 204 e~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~ 261 (782)
+....+++|..+|+.++..|+++.+|++.|++++++|||++|+.+++|......+..+
T Consensus 614 ~~~~~~~~G~~~~~~~~~~pi~~~~g~~~g~v~~~~DITe~k~~e~~L~~~a~~D~lT 671 (1092)
T PRK09776 614 DVVLHCRSGGSYDVHYSITPLSTLDGENIGSVLVIQDVTESRKMLRQLSYSASHDALT 671 (1092)
T ss_pred eEEEEeCCCcEEEEEEEeeeeecCCCCEEEEEEEEEecchHHHHHHHHHhhcCCCccc
Confidence 7778899999999999999999999999999999999999999999998776554443
No 461
>PRK09776 putative diguanylate cyclase; Provisional
Probab=99.10 E-value=4.6e-10 Score=142.23 Aligned_cols=129 Identities=13% Similarity=0.098 Sum_probs=109.2
Q ss_pred CHHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcC-CeEEEEEE
Q 003978 128 TDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMG-ERWTGQFP 206 (782)
Q Consensus 128 ~~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g-~~~~~e~~ 206 (782)
.++.++.++++++++|+++|.+|+|+++|+++++++||+.+|++|+++.+++++++.......+...+..+ ..+..+.+
T Consensus 281 ~e~r~~~l~e~~~~~i~~~d~dG~i~~~N~~~~~l~G~~~~el~g~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~e~~ 360 (1092)
T PRK09776 281 SETRFRNAMEYSAIGMALVGTEGQWLQVNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLLSGEINSYSMEKR 360 (1092)
T ss_pred HHHHHHHHHHhCCceEEEEcCCCcEEehhHHHHHHhCCCHHHHccCCceeccCcchhHhHHHHHHHHHcCCccceeeeeE
Confidence 35678999999999999999999999999999999999999999999999888776433333333333332 23677888
Q ss_pred EEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHhhc
Q 003978 207 AKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKN 256 (782)
Q Consensus 207 ~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~ 256 (782)
..++||+.+|+..+..|+++.+|++.+++++++|||++|++|+++++..+
T Consensus 361 ~~~~dG~~~~~~~~~~~~~~~~g~~~~~i~~~~DITerk~~e~~l~~~~~ 410 (1092)
T PRK09776 361 YYRRDGEVVWALLAVSLVRDTDGTPLYFIAQIEDINELKRTEQVNERLME 410 (1092)
T ss_pred EEcCCCCEEEEEEEEEEEECCCCCEeeehhhHHhhHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999876543
No 462
>TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154).
Probab=99.09 E-value=7.3e-10 Score=120.10 Aligned_cols=128 Identities=16% Similarity=0.251 Sum_probs=102.1
Q ss_pred HHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEE
Q 003978 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAK 208 (782)
Q Consensus 129 ~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~ 208 (782)
.+.|+.++++++++|+++|.+|+|+|+|++|++++||++++++|+++.+++.+.. +...+..+.. ...+...
T Consensus 5 ~~~l~~~~~~~~~~i~~~d~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~-------~~~~l~~~~~-~~~~~~~ 76 (333)
T TIGR02966 5 LSRFRAAAQALPDAVVVLDEEGQIEWCNPAAERLLGLRWPDDLGQRITNLIRHPE-------FVEYLAAGRF-SEPLELP 76 (333)
T ss_pred HHHHHHHHHhCcCcEEEECCCCcEEEEcHHHHHHhCCChHHHcCCcHHHHccCHH-------HHHHHHhccc-CCCeEee
Confidence 4678999999999999999999999999999999999999999999998875432 3444444333 2235555
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHhhccccccccCCchhHHHHHhCCCchhHHHHH
Q 003978 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQAT 285 (782)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~i~~~~~gl~~~l~~d~~qpL~~~ 285 (782)
.++|..+|+.+...|+.+.+ ++.+++|||+++++++... .+...++|+.++||..+
T Consensus 77 ~~~~~~~~~~~~~~p~~~~~-----~~~~~~dit~~~~~~~~~~----------------~~~~~l~h~l~~pL~~i 132 (333)
T TIGR02966 77 SPINSERVLEIRIAPYGEEQ-----KLLVARDVTRLRRLEQMRR----------------DFVANVSHELRTPLTVL 132 (333)
T ss_pred cCCCCceEEEEEEEEcCCCc-----eEEEEeCchHHHHHHHHHH----------------HHHHhhhhhhcccHHHH
Confidence 68888999999999987543 6788999999998766532 26778889999998764
No 463
>PRK11360 sensory histidine kinase AtoS; Provisional
Probab=99.08 E-value=1.8e-09 Score=126.96 Aligned_cols=146 Identities=16% Similarity=0.226 Sum_probs=119.1
Q ss_pred HHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeE-EEEEEEE
Q 003978 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERW-TGQFPAK 208 (782)
Q Consensus 130 ~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~-~~e~~~~ 208 (782)
..++.++++++++|+++|.+|+|+++|+++++++||+.++++|+++.+++++... ....+.+.+..+... ..++...
T Consensus 262 ~~~~~i~~~~~~~i~~~d~~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 339 (607)
T PRK11360 262 SLNELILESIADGVIAIDRQGKITTMNPAAEVITGLQRHELVGKPYSELFPPNTP--FASPLLDTLEHGTEHVDLEISFP 339 (607)
T ss_pred HHHHHHHHhccCeEEEEcCCCCEEEECHHHHHHhCCChHHhcCCcHHHHcCCchh--HHHHHHHHHhcCCCccceEEEEE
Confidence 4577899999999999999999999999999999999999999999998875432 233455666666553 4456677
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHhhccccccccCCchhHHHHHhCCCchhHHHHH
Q 003978 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQAT 285 (782)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~i~~~~~gl~~~l~~d~~qpL~~~ 285 (782)
.++|..+ +.++..|+++.+|++.|++++++|||++++++++++...... ....++..++|++++||...
T Consensus 340 ~~~~~~~-~~~~~~~i~~~~g~~~~~i~~~~Dite~~~~e~~l~~~~~~~-------~l~~~~~~~~hel~~~l~~i 408 (607)
T PRK11360 340 GRDRTIE-LSVSTSLLHNTHGEMIGALVIFSDLTERKRLQRRVARQERLA-------ALGELVAGVAHEIRNPLTAI 408 (607)
T ss_pred cCCCcEE-EEEEEeeEEcCCCCEEEEEEEEeechHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHhhhHHHHH
Confidence 8888776 889999999999999999999999999999999987654321 13347888899999999764
No 464
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.06 E-value=9.7e-10 Score=112.55 Aligned_cols=141 Identities=21% Similarity=0.247 Sum_probs=103.0
Q ss_pred eeeccCCcEEEEEEEEcC-CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCC--CceeEEeeeeecC---CceeEEEeec
Q 003978 511 EQIGQGSCGTVYHAVWYG-SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRH--PNVLLFMGAVTSP---QRLCIVTEFL 584 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~~~-~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~H--pnIv~l~~~~~~~---~~~~lv~E~~ 584 (782)
+.|+.|.++.||++...+ ..+++|+....... .....+..|+++++.+.+ .++++++.+.... +..++||||+
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 568999999999998865 88999997654321 123467889999999865 3456777776553 3678999999
Q ss_pred CCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcC------------------------------------------
Q 003978 585 PRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC------------------------------------------ 622 (782)
Q Consensus 585 ~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~------------------------------------------ 622 (782)
+|.++.+.+.. ..+++.....++.+++.+|..||+.
T Consensus 83 ~G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 83 DGRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CCEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 99887665431 2355555556666666666666642
Q ss_pred ------------CCCeeecCCCCCcEEEcC--CCcEEEEecCCCcc
Q 003978 623 ------------NPPIIHRDLKSSNLLVDK--HWTVKVGDFGLSRL 654 (782)
Q Consensus 623 ------------~~~ivHrDIKp~NILl~~--~~~vkL~DFGla~~ 654 (782)
...++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 134799999999999998 66789999998764
No 465
>PF13596 PAS_10: PAS domain; PDB: 3CAX_A 2QKP_D.
Probab=99.00 E-value=2.3e-09 Score=97.33 Aligned_cols=106 Identities=22% Similarity=0.319 Sum_probs=78.0
Q ss_pred HHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEcCC
Q 003978 132 YLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKT 211 (782)
Q Consensus 132 ~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kd 211 (782)
++.+|++++.+++++|.+++|.|+|+++.++|+... ..+|+++.++.++.. ......+.+.+..|+....+... ..+
T Consensus 1 L~~il~s~~~~i~~vD~~~~I~~~n~~a~~~f~~~~-~~iGr~l~~~~~~~~-~~~l~~~i~~~~~~~~~~~~~~~-~~~ 77 (106)
T PF13596_consen 1 LNNILDSMPIGIIFVDRNLRIRYFNPAAARLFNLSP-SDIGRPLFDIHPPLS-YPNLKKIIEQVRSGKEEEFEIVI-PNG 77 (106)
T ss_dssp HHHHHHHSSSEEEEEETTSBEEEE-SCGC-SS---G-GGTTSBCCCSS-HHH-HHHHHHHHHHHHTTSBSEEEEEE-EET
T ss_pred ChHHHhcCCCCEEEEcCCCeEEEeChhHhhhcCCCh-HHCCCCHHHcCCccc-hHHHHHHHHHHHcCCCceEEEEe-cCC
Confidence 468999999999999999999999999999999765 558999999987643 33445567777888864444333 244
Q ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEehh
Q 003978 212 EERVLVVATNTPFYDDDGTLVGIVCVSTDSR 242 (782)
Q Consensus 212 G~~~~v~~~~~Pi~d~~G~v~g~v~i~rDIT 242 (782)
| .|+.+...|+++.+|++.|++.++.|||
T Consensus 78 ~--~~~~~~~~P~~~~~g~~~G~v~~~~DIT 106 (106)
T PF13596_consen 78 G--RWYLVRYRPYRDEDGEYAGAVITFQDIT 106 (106)
T ss_dssp T--EEEEEEEEEEE-TTS-EEEEEEEEEE-G
T ss_pred C--EEEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 4 4668899999999999999999999998
No 466
>COG5002 VicK Signal transduction histidine kinase [Signal transduction mechanisms]
Probab=98.96 E-value=7.9e-09 Score=108.46 Aligned_cols=132 Identities=20% Similarity=0.290 Sum_probs=109.3
Q ss_pred HHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEc
Q 003978 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKT 209 (782)
Q Consensus 130 ~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~ 209 (782)
+.+..+|-.+.|||+.+|..|+|+.+|..|.+++|.+.++++|+++.+++.-++... +.+.+........+..
T Consensus 111 ~kL~SvlayMtDGViATdRrG~iI~iN~~A~k~L~~~~E~~~~~~i~elL~i~d~y~----~~dL~e~~~s~lld~~--- 183 (459)
T COG5002 111 RKLDSVLAYMTDGVIATDRRGKIILINKPALKMLGVSKEDALGRSILELLKIEDTYT----FEDLVEKNDSLLLDSS--- 183 (459)
T ss_pred HHHHHHHHHHcCceEeecCCCcEEEeccHHHHHhCcCHHHHhcccHHHHhCCcccee----HHHHHhcCCcEEEeec---
Confidence 558889999999999999999999999999999999999999999999987666432 3444444443333322
Q ss_pred CCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHhhccccccccCCchhHHHHHhCCCchhHHHH
Q 003978 210 KTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQA 284 (782)
Q Consensus 210 kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~i~~~~~gl~~~l~~d~~qpL~~ 284 (782)
.+++.+.+.++.+.+.-+.|-+.|+|+++.|+||+.+.|++.+. +.+.++|+++.||.+
T Consensus 184 ~~~E~~~lrv~Fs~i~rEsGfisGlIaVlhDvTEqek~e~ErRe----------------fvanvSHElRTPlts 242 (459)
T COG5002 184 DEEEGYVLRVNFSVIQRESGFISGLIAVLHDVTEQEKVERERRE----------------FVANVSHELRTPLTS 242 (459)
T ss_pred CCCccEEEEEEEEEEeecccccceeEEEEecccHHHHHHHHHHH----------------HHHhcchhhcCchHH
Confidence 26777788888889999999999999999999999999888643 678899999999977
No 467
>PRK11359 cyclic-di-GMP phosphodiesterase; Provisional
Probab=98.95 E-value=5.5e-09 Score=128.02 Aligned_cols=125 Identities=23% Similarity=0.273 Sum_probs=104.9
Q ss_pred HHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCcccccccccc-ccHHHHHHHHHHcCCeEEEEEEE
Q 003978 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRD-FDVAYDIVHRIKMGERWTGQFPA 207 (782)
Q Consensus 129 ~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~-~~~~~~l~~~l~~g~~~~~e~~~ 207 (782)
.+.+..++++++++|+++|.+|+|+++|+++++++||+.++++|+++.+++++... ......+...+..+..+..+.+.
T Consensus 135 ~~~~~~~~~~~~~~i~~~d~~g~i~~~N~~~~~l~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 214 (799)
T PRK11359 135 TRQLIIAVDHLDRPVIVLDPERRIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLL 214 (799)
T ss_pred HHHHHHHHhcCCCcEEEEcCCCcEEEEChhhHhhhCCCHHHHCCCChHHhcCCCCCcHHHHHHHHHhhccCCCCcceeEE
Confidence 34566789999999999999999999999999999999999999999887654333 22333455666666677778888
Q ss_pred EcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHH
Q 003978 208 KTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWD 253 (782)
Q Consensus 208 ~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~ 253 (782)
.+++|..+|+.++..|+.+.+|.+.+++++++|||+++++++..+.
T Consensus 215 ~~~dG~~~~~~~~~~~v~d~~g~~~~~~~~~~DITerk~~e~~~~~ 260 (799)
T PRK11359 215 LTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGN 260 (799)
T ss_pred eCCCCCEEEEEeeeeeeecCCCceeEEEEEeehhhhHHHHHHHHHH
Confidence 8999999999999999999999999999999999999988765543
No 468
>PRK13560 hypothetical protein; Provisional
Probab=98.93 E-value=8.7e-09 Score=126.06 Aligned_cols=146 Identities=10% Similarity=0.096 Sum_probs=116.0
Q ss_pred HHHHHHHcCceeEEEcCC-CcEEEecHHHHHHhCCChhhHcC--CCccccccccccccHHHHHHHHHHcCC-eEEEEEEE
Q 003978 132 YLNILQSMGQSVHIFDLS-DRIIYWNRSAELLYGYSAEEALG--QDAIELLTDGRDFDVAYDIVHRIKMGE-RWTGQFPA 207 (782)
Q Consensus 132 ~~~ile~~~d~I~v~D~d-G~Ii~vN~aae~l~Gys~eEliG--~~~~~l~~~~~~~~~~~~l~~~l~~g~-~~~~e~~~ 207 (782)
.+.++++.+++++..+.+ |..+.+|.....++||+++++++ ..+..++++++.......+...+..+. .+..++++
T Consensus 475 ~~~~~e~~~~~i~~~~~~~~~~~~~~~~~~~~~G~~~~e~~~~~~~~~~~~~p~d~~~~~~~~~~~~~~g~~~~~~e~r~ 554 (807)
T PRK13560 475 ANLIVENSPLVLFRWKAEEGWPVELVSKNITQFGYEPDEFISGKRMFAAIIHPADLEQVAAEVAEFAAQGVDRFEQEYRI 554 (807)
T ss_pred HHHHHhcCCceEEEEecCCCceEEEecchhhhcCCCHHHhhcccchHhhhcChhhHHHHHHHHHHHHhcCCccceeEEEE
Confidence 456789999999887754 55666677778899999999986 334456666654444444555555554 46778999
Q ss_pred EcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHhhccccccccCCchhHHHHHhCCCchhHHHHHH
Q 003978 208 KTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQATI 286 (782)
Q Consensus 208 ~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~i~~~~~gl~~~l~~d~~qpL~~~i 286 (782)
.++||..+|+.....|++|.+|++.+++++++|||++|++|++|+....+ +..|+..++||++.||+.+.
T Consensus 555 ~~~dG~~~w~~~~~~~~~d~~G~~~~~~g~~~DITerK~aE~~L~~a~~~---------~~~~l~~isHelrnpL~~I~ 624 (807)
T PRK13560 555 LGKGGAVCWIDDQSAAERDEEGQISHFEGIVIDISERKHAEEKIKAALTE---------KEVLLKEIHHRVKNNLQIIS 624 (807)
T ss_pred EcCCCCEEEEEecceeeeCCCCCEEEEEEEEechHHHHHHHHHHHHHHHH---------HHHHHHHhHHHHhChHHHHH
Confidence 99999999999999999999999999999999999999999998765432 44588999999999998753
No 469
>cd00130 PAS PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in signal transduction.
Probab=98.92 E-value=3.1e-08 Score=81.74 Aligned_cols=102 Identities=28% Similarity=0.455 Sum_probs=85.5
Q ss_pred CceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEcCCCCEEEEEE
Q 003978 140 GQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTEERVLVVA 219 (782)
Q Consensus 140 ~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~~v~~ 219 (782)
+++++++|.+|.++++|+++++++|++..+++|+.+..++++.........+...+..+.....+......+|...|+.+
T Consensus 2 ~~~i~~~d~~~~~~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (103)
T cd00130 2 PDGVIVLDLDGRILYANPAAEQLLGYSPEELIGKSLLDLIHPEDREELRERLENLLSGGEPVTLEVRLRRKDGSVIWVLV 81 (103)
T ss_pred CceEEEECCCCcEEEECHHHHHHhCCCHHHHcCccHHHhcCCccchHHHHHHHHHHhcCcCeEEEEEEEccCCCEEEEEE
Confidence 57899999999999999999999999999999999988887766443333445555555667777888888899999999
Q ss_pred EEEEEECCCCCEEEEEEEEEeh
Q 003978 220 TNTPFYDDDGTLVGIVCVSTDS 241 (782)
Q Consensus 220 ~~~Pi~d~~G~v~g~v~i~rDI 241 (782)
...++.+.+|...+++++++||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~di 103 (103)
T cd00130 82 SLTPIRDEGGEVIGLLGVVRDI 103 (103)
T ss_pred EEEEEecCCCCEEEEEEEEecC
Confidence 9999998888999999999886
No 470
>PF08447 PAS_3: PAS fold; InterPro: IPR013655 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. The PAS domain contains a sensory box, or S-box domain that occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include haem in the oxygen sensor FixL [], FAD in the redox potential sensor NifL [], and a 4-hydroxycinnamyl chromophore in photoactive yellow protein []. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. This domain has been found in the gene product of the madA gene of the filamentous zygomycete fungus Phycomyces blakesleeanus. It has been shown that MadA encodes a blue-light photoreceptor for phototropism and other light responses. The gene is involved in the phototropic responses associated with sporangiophore growth; they exhibit phototropism by bending toward near-UV and blue wavelengths and away from far-UV wavelengths in a manner that is physiologically similar to plant phototropic responses [].; GO: 0005515 protein binding; PDB: 3NJA_D 3H9W_A 3GDI_B 3ICY_A 3EEH_A 3MR0_B.
Probab=98.90 E-value=1.4e-08 Score=88.78 Aligned_cols=86 Identities=26% Similarity=0.471 Sum_probs=72.1
Q ss_pred EEEecHHHHHHhCCChhhHcCCC----ccccccccccccHHHHHHH-HHHcCCeEEEEEEEEcCCCCEEEEEEEEEEEEC
Q 003978 152 IIYWNRSAELLYGYSAEEALGQD----AIELLTDGRDFDVAYDIVH-RIKMGERWTGQFPAKTKTEERVLVVATNTPFYD 226 (782)
Q Consensus 152 Ii~vN~aae~l~Gys~eEliG~~----~~~l~~~~~~~~~~~~l~~-~l~~g~~~~~e~~~~~kdG~~~~v~~~~~Pi~d 226 (782)
|+|+|+.+++|+||+++++ +.. +..+++|++.......+.. .+..+..+..+++++++||+.+|+.+...+++|
T Consensus 1 ~i~~s~~~~~i~G~~~~~~-~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~~~~~~~~e~R~~~~~G~~~wi~~~~~~~~d 79 (91)
T PF08447_consen 1 IIYWSDNFYEIFGYSPEEI-GKPDFEEWLERIHPDDRERVRQAIQQAALQNGEPFEIEYRIRRKDGEYRWIEVRGRPIFD 79 (91)
T ss_dssp -EEE-THHHHHHTS-HHHH-TCBEHHHHHHHB-TTTHHHHHHHHHHHHHHTT-EEEEEEEEEGTTSTEEEEEEEEEEEET
T ss_pred CEEEeHHHHHHhCCCHHHh-ccCCHHHHHhhcCHHHHHHHHHHHHHHhhccCcceEEEEEEECCCCCEEEEEEEEEEEEC
Confidence 7899999999999999999 777 7788999987777677777 677788999999999999999999999999999
Q ss_pred CCCCEEEEEEEE
Q 003978 227 DDGTLVGIVCVS 238 (782)
Q Consensus 227 ~~G~v~g~v~i~ 238 (782)
.+|+++.++++.
T Consensus 80 ~~g~~~~~~Gv~ 91 (91)
T PF08447_consen 80 ENGKPIRIIGVI 91 (91)
T ss_dssp TTS-EEEEEEEE
T ss_pred CCCCEEEEEEEC
Confidence 999999998874
No 471
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.87 E-value=2.3e-08 Score=106.03 Aligned_cols=138 Identities=18% Similarity=0.133 Sum_probs=97.7
Q ss_pred eccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHH----------HHHHHHHHHHhCCCCc--eeEEeeeeec-----CC
Q 003978 513 IGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIH----------SFRQEVSLMKRLRHPN--VLLFMGAVTS-----PQ 575 (782)
Q Consensus 513 IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~----------~~~~Ei~il~~l~Hpn--Iv~l~~~~~~-----~~ 575 (782)
+-.-....|+++...|+.|.||........ +..+ .+.+|...+..|..-+ ++.++++++. ..
T Consensus 30 v~~~~~rrvvr~~~~g~~~~vKr~~~~~~~-~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~ 108 (268)
T PRK15123 30 FRELEGRRTLRFELAGKSYFLKWHRGTGWG-EIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATR 108 (268)
T ss_pred EecCCCceEEEEEECCEEEEEEEecCCcHH-HHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccc
Confidence 333444457788888889999976433311 1111 3678888887774222 2344444432 23
Q ss_pred ceeEEEeecCCC-CHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC-------CCcEEE
Q 003978 576 RLCIVTEFLPRG-SLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-------HWTVKV 646 (782)
Q Consensus 576 ~~~lv~E~~~gg-sL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~-------~~~vkL 646 (782)
..+||||++++. +|.+++... ....+......++.+++..+.-||..| |+|+|+++.||||+. +..+.|
T Consensus 109 ~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G--i~HgDL~~~NiLl~~~~~~~~~~~~~~L 186 (268)
T PRK15123 109 TSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG--INHRDCYICHFLLHLPFPGREEDLKLSV 186 (268)
T ss_pred eeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc--CccCCCChhhEEEeccccCCCCCceEEE
Confidence 478999999876 899998642 234556677788999999999999999 999999999999975 468999
Q ss_pred EecCCCc
Q 003978 647 GDFGLSR 653 (782)
Q Consensus 647 ~DFGla~ 653 (782)
+||+.+.
T Consensus 187 IDl~r~~ 193 (268)
T PRK15123 187 IDLHRAQ 193 (268)
T ss_pred EECCccc
Confidence 9999775
No 472
>COG3829 RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]
Probab=98.86 E-value=1.7e-08 Score=112.87 Aligned_cols=116 Identities=23% Similarity=0.453 Sum_probs=94.9
Q ss_pred HHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEc
Q 003978 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKT 209 (782)
Q Consensus 130 ~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~ 209 (782)
+.|+.|++.+.++|+++|.+|.|+++|.++..++|++.++++|+++.+++.... ...+..++..+++.......+.
T Consensus 117 ~~l~~il~~~~~~l~vvD~~G~~i~~N~~~~~~~gl~~e~~~gk~~~~v~~~~~----~s~~l~vl~~~kp~~~~~~~~~ 192 (560)
T COG3829 117 QRLEAILDSIDDGLLVVDEDGIIIYYNKAYAKLLGLSPEEVLGKHLLDVVSAGE----DSTLLEVLRTGKPIRDVVQTYN 192 (560)
T ss_pred HHHHHHHhhccCceEEEcCCCcEEEEcHHHHHHhCCCHHHHcCCcHHHHHhccC----CceehhhhhcCCcceeeeeeec
Confidence 668899999999999999999999999999999999999999999999871111 1126788999998877766655
Q ss_pred CCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHh
Q 003978 210 KTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDT 254 (782)
Q Consensus 210 kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~ 254 (782)
.+.. ..+..|++ .+|.+.|+|.+++|+++.+.+..++...
T Consensus 193 ~~~~----i~~~~pv~-~~g~l~G~v~~~~~~~~l~~l~~~~~~~ 232 (560)
T COG3829 193 GNKI----IVNVAPVY-ADGQLIGVVGISKDVSELERLTRELEES 232 (560)
T ss_pred CCce----eEeeccEe-cCCcEEEEEEeecchHHHHHHHHHHHHH
Confidence 4432 56677877 5679999999999999999887776544
No 473
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.86 E-value=8.3e-08 Score=106.18 Aligned_cols=212 Identities=18% Similarity=0.208 Sum_probs=151.4
Q ss_pred CcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeee----cCCceeEEEeecCC-CCH
Q 003978 517 SCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT----SPQRLCIVTEFLPR-GSL 589 (782)
Q Consensus 517 ~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~----~~~~~~lv~E~~~g-gsL 589 (782)
.-.+.|++.. .|..|++|.+...+... ......-++.++++.|+|||+|.++|. .+..+++|++|.++ ++|
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~--~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQS--TNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccC--cccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 3457899986 57789999884332211 011122477899999999999999886 45678999999876 478
Q ss_pred HHHHhhc--------------CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 590 FRLLQRN--------------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 590 ~~~l~~~--------------~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
+++...+ +...++..+|.++.||..||.++|+.| +..+-|.|.+||++.+.+|+|...|.....
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG--LAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG--LACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC--ceeecccHhHeEeeCcceEEEecccceeee
Confidence 7776321 334688999999999999999999999 888999999999999989999877765443
Q ss_pred ccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCC-CCCCCChHHHHHHhhccccccCCCCCCCHHH
Q 003978 656 HETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 734 (782)
Q Consensus 656 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~-Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l 734 (782)
..... +.+.+. .+-|.=.||.+++.|.||.. -|........ . ...+...++.++
T Consensus 444 ~~d~~--------------~~le~~---Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s--~------~~~I~~~yS~D~ 498 (655)
T KOG3741|consen 444 QEDPT--------------EPLESQ---QQNDLRDLGLLLLALATGTENSNRTDSTQSS--H------LTRITTTYSTDL 498 (655)
T ss_pred cCCCC--------------cchhHH---hhhhHHHHHHHHHHHhhcccccccccchHHH--H------HHHhhhhhhHHH
Confidence 33210 112221 46799999999999999943 2322222221 0 112345688999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHH
Q 003978 735 AAIVESCWHSDPQCRPSFQELVDK 758 (782)
Q Consensus 735 ~~LI~~cL~~dP~~RPs~~ell~~ 758 (782)
+++|......++.+ -++.+++..
T Consensus 499 rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 499 RNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred HHHHHHHHhcCccc-ccHHHHHHH
Confidence 99999999999887 577777655
No 474
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.83 E-value=2.1e-09 Score=122.65 Aligned_cols=145 Identities=17% Similarity=0.302 Sum_probs=107.4
Q ss_pred HHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc-------cc--cccCCCCCCcccCcccccCCC
Q 003978 611 DIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET-------YL--TTKTGKGTPQWMAPEVLRNEP 681 (782)
Q Consensus 611 qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~-------~~--~~~~~~Gt~~y~aPE~l~~~~ 681 (782)
+++.||.|+|.. .++||++|.|++|.++..+.+||+.|+++...... +. ......-...|.|||++.+..
T Consensus 107 ~v~dgl~flh~s-Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~ 185 (700)
T KOG2137|consen 107 NVADGLAFLHRS-AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTT 185 (700)
T ss_pred cccchhhhhccC-cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcccc
Confidence 455899999986 35999999999999999999999999987543321 00 011113456899999999988
Q ss_pred CCchhHHHHHHHHHHHHH-cCCCCCCCCChHHHHHHh--hccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHH
Q 003978 682 SDEKSDVYSFGVILWELA-TEKIPWDNLNSMQVIGAV--GFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELV 756 (782)
Q Consensus 682 ~s~~sDIwSLG~ll~ell-tG~~Pf~~~~~~~~~~~i--~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell 756 (782)
.+.++|+|||||++|-++ .|+.-+............ ............+|.++++=+.+++..++..||++..++
T Consensus 186 ~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~ 263 (700)
T KOG2137|consen 186 NTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLL 263 (700)
T ss_pred ccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhhh
Confidence 889999999999999999 566655544332222111 111123445578999999999999999999999888773
No 475
>PRK11086 sensory histidine kinase DcuS; Provisional
Probab=98.80 E-value=1e-07 Score=111.30 Aligned_cols=136 Identities=16% Similarity=0.239 Sum_probs=101.5
Q ss_pred HHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCC---hhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEE
Q 003978 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYS---AEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFP 206 (782)
Q Consensus 130 ~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys---~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~ 206 (782)
+.++.+++++++||+++|.+|+|+++|++|++++|++ ..+.+|+.+..+.+.. .+...+..+........
T Consensus 221 ~~~~~il~~~~~gIi~~D~~g~I~~~N~~a~~llg~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 293 (542)
T PRK11086 221 EQRQAMLQSIKEGVIAVDDRGEVTLINDEAKRLFNYKKGLEDDPLGTDVESWMPVS-------RLKEVLRTGTPRRDEEI 293 (542)
T ss_pred HHHHHHHHHhcCcEEEECCCCeEEEEhHHHHHHhCCCcCCcccccCCcHHHhCCch-------hHHHHHhcCCCccceEE
Confidence 3357899999999999999999999999999999875 3467888877766532 24556667665433222
Q ss_pred EEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHhhccccccccCCchhHHHHHhCCCchhHHHHHH
Q 003978 207 AKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQATI 286 (782)
Q Consensus 207 ~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~i~~~~~gl~~~l~~d~~qpL~~~i 286 (782)
..+|. ++.+...|+.+ +|.+.|++.+++|+|+.+++++++...... ...+...+||.+.||+.+.
T Consensus 294 --~~~g~--~~~~~~~pi~~-~g~~~g~v~~~rDite~~~l~~~l~~~~~~----------~~~l~~~sHel~npL~~I~ 358 (542)
T PRK11086 294 --NINGR--LLLTNTVPVRV-NGEIIGAIATFRDKTEVRQLAQRLDGMVNY----------ADALRAQSHEFMNKLHVIL 358 (542)
T ss_pred --EECCE--EEEEEEEEEeE-CCEEEEEEEEEEEchHHHHHHHHHHHHHHH----------HHHHHhhchhhcCHHHHHH
Confidence 22453 45566789987 889999999999999999998888655422 1245667899999998764
Q ss_pred H
Q 003978 287 A 287 (782)
Q Consensus 287 ~ 287 (782)
.
T Consensus 359 g 359 (542)
T PRK11086 359 G 359 (542)
T ss_pred H
Confidence 3
No 476
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.75 E-value=5.7e-08 Score=97.47 Aligned_cols=127 Identities=29% Similarity=0.308 Sum_probs=81.5
Q ss_pred EEEEEEE-cCCeEEEEEEecc---------------C--------CC-HHHHHHHHHHHHHHHhCCCC--ceeEEeeeee
Q 003978 520 TVYHAVW-YGSDVAVKVFSRQ---------------E--------YS-DEVIHSFRQEVSLMKRLRHP--NVLLFMGAVT 572 (782)
Q Consensus 520 ~Vy~~~~-~~~~vAiK~~~~~---------------~--------~~-~~~~~~~~~Ei~il~~l~Hp--nIv~l~~~~~ 572 (782)
.||.|.. .+..+|||+.+.. . .. ........+|.+.|..+..- ++++++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 4899987 6778999998531 0 01 12335677899999999755 466777653
Q ss_pred cCCceeEEEeecC--CCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHh-hhcCCCCeeecCCCCCcEEEcCCCcEEEEec
Q 003978 573 SPQRLCIVTEFLP--RGSLFRLLQRNTTKLDWRRRILMALDIARGVSY-LHHCNPPIIHRDLKSSNLLVDKHWTVKVGDF 649 (782)
Q Consensus 573 ~~~~~~lv~E~~~--ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~-LH~~~~~ivHrDIKp~NILl~~~~~vkL~DF 649 (782)
..+|||||++ |..+..+.... ++......++.+++..+.. +|..| |||+|+.+.|||++.+ .+.|+||
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~~~~g--ivHGDLs~~NIlv~~~-~~~iIDf 150 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKMLHKAG--IVHGDLSEYNILVDDG-KVYIIDF 150 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHHHCTT--EEESS-STTSEEEETT-CEEE--G
T ss_pred ---CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHHHhcC--ceecCCChhhEEeecc-eEEEEec
Confidence 3479999998 65554443321 1123344556677775555 57888 9999999999999988 9999999
Q ss_pred CCCcccc
Q 003978 650 GLSRLKH 656 (782)
Q Consensus 650 Gla~~~~ 656 (782)
|.+....
T Consensus 151 ~qav~~~ 157 (188)
T PF01163_consen 151 GQAVDSS 157 (188)
T ss_dssp TTEEETT
T ss_pred CcceecC
Confidence 9876443
No 477
>PRK10820 DNA-binding transcriptional regulator TyrR; Provisional
Probab=98.74 E-value=6.1e-08 Score=112.63 Aligned_cols=106 Identities=18% Similarity=0.255 Sum_probs=81.9
Q ss_pred HHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEc
Q 003978 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKT 209 (782)
Q Consensus 130 ~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~ 209 (782)
..++.||+++++||+++|.+|+|+++|++|+++||++.++++|+++.++++... +.+.++.+....... ...
T Consensus 80 ~~L~aIL~sm~eGVi~vD~~G~I~~iN~aA~~Llg~~~eel~Gk~i~eli~~~~-------l~~~le~~~~~~~~~-~v~ 151 (520)
T PRK10820 80 RALSALLEALPEPVLSIDMKGKVELANPASCQLFGQSEEKLRNHTAAQLINGFN-------FLRWLESEPQDSHNE-HVV 151 (520)
T ss_pred HHHHHHHHhCCCcEEEECCCCeeeHhHHHHHHHHCcCHHHHCCCcHHHHcCcch-------HHHHHHcCCCccceE-EEE
Confidence 558899999999999999999999999999999999999999999999987543 445566665421111 223
Q ss_pred CCCCEEEEEEEEEEEE--CCCCCE--EEEEEEEEehhHHH
Q 003978 210 KTEERVLVVATNTPFY--DDDGTL--VGIVCVSTDSRPFQ 245 (782)
Q Consensus 210 kdG~~~~v~~~~~Pi~--d~~G~v--~g~v~i~rDITerk 245 (782)
.+|..++ +.+.|+. +++|.. +|+|.+++|+++..
T Consensus 152 ~~g~~~~--v~~~PI~~~d~~g~~~~~GaVivlrd~~~l~ 189 (520)
T PRK10820 152 INGQDFL--MEITPVYLQDENDQHVLVGAVVMLRSTARMG 189 (520)
T ss_pred ECCEEEE--EEEEeeeecCCCCceeEEEEEEEeccHHHHH
Confidence 4576555 5566776 666654 89999999998754
No 478
>PRK11006 phoR phosphate regulon sensor protein; Provisional
Probab=98.72 E-value=6.2e-08 Score=110.24 Aligned_cols=127 Identities=17% Similarity=0.255 Sum_probs=92.8
Q ss_pred HHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEE
Q 003978 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAK 208 (782)
Q Consensus 129 ~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~ 208 (782)
.+.|+.++++++++|+++|.+|+|+++|++|++++||+.++++|+++.+++.... +...+.... ........
T Consensus 97 ~~~~~~~~~~~~~~i~~~d~~g~i~~~N~~a~~l~g~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~~ 168 (430)
T PRK11006 97 IKRFRSGAESLPDAVVLTTEEGNIFWCNGLAQQLLGFRWPEDNGQNILNLLRYPE-------FTQYLKTRD-FSRPLTLV 168 (430)
T ss_pred HHHHHHHHHhCCCeEEEEcCCCceeHHHHHHHHHhCCCChHhCCCcHHHHhcCHH-------HHHHHHhcc-cCCCeEEE
Confidence 4668899999999999999999999999999999999999999999988775432 122222222 11222333
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHhhccccccccCCchhHHHHHhCCCchhHHHHHH
Q 003978 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQATI 286 (782)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~i~~~~~gl~~~l~~d~~qpL~~~i 286 (782)
..+|. ++.+...|+.+ + +.+.+++|||+++++++..+ .|++.++||++.||..+.
T Consensus 169 ~~~~~--~~~~~~~~~~~--~---~~~~~~~dit~~~~~e~~~~----------------~~~~~isHelrtPL~~i~ 223 (430)
T PRK11006 169 LNNGR--HLEIRVMPYTE--G---QLLMVARDVTQMHQLEGARR----------------NFFANVSHELRTPLTVLQ 223 (430)
T ss_pred cCCCC--EEEEEEEEcCC--C---cEEEEEehhhHHHHHHHHHH----------------HHHHHhHHHhcchHHHHH
Confidence 45554 45566667642 3 25678999999998876543 278889999999997743
No 479
>PRK11359 cyclic-di-GMP phosphodiesterase; Provisional
Probab=98.71 E-value=9.4e-08 Score=117.21 Aligned_cols=124 Identities=16% Similarity=0.236 Sum_probs=98.5
Q ss_pred HHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCe----EEEE
Q 003978 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGER----WTGQ 204 (782)
Q Consensus 129 ~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~----~~~e 204 (782)
+..+..+++..+++++++|.+|+|+++|+++++++||+.+|++|+++.+++++.........+......+.. +..+
T Consensus 11 ~~~~~~~le~~~~~i~~~d~~g~i~~~N~~~~~l~G~s~eeliG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 90 (799)
T PRK11359 11 DGIFFPALEQNMMGAVLINENDEVLFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRE 90 (799)
T ss_pred hhhHHHHHHhhcCcEEEEcCCCeEEEEcHHHHHHhCCCHHHHcCCCHHHhcCccccccchHHHhhhhccCCcccccccee
Confidence 455778899999999999999999999999999999999999999999998876654333334444444332 3457
Q ss_pred EEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHh
Q 003978 205 FPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDT 254 (782)
Q Consensus 205 ~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~ 254 (782)
++.+++||..+|+.++..|+. .+|. .+++++.+|||++++++++++..
T Consensus 91 ~~~~~~dG~~~~v~~~~~~~~-~~g~-~~~~~~~~DiT~~~~~~~~~~~~ 138 (799)
T PRK11359 91 LQLEKKDGSKIWTRFALSKVS-AEGK-VYYLALVRDASVEMAQKEQTRQL 138 (799)
T ss_pred eEEecCCcCEEEEEEEeeeec-cCCc-eEEEEEEeeccchhhhHHHHHHH
Confidence 888999999999999998874 4565 45788999999998877765443
No 480
>PF12860 PAS_7: PAS fold
Probab=98.67 E-value=6.9e-08 Score=88.88 Aligned_cols=105 Identities=24% Similarity=0.351 Sum_probs=75.3
Q ss_pred HHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhH-cCCCccccccccc------cccHHHHHHHHH---HcCCeEEEEE
Q 003978 136 LQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEA-LGQDAIELLTDGR------DFDVAYDIVHRI---KMGERWTGQF 205 (782)
Q Consensus 136 le~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEl-iG~~~~~l~~~~~------~~~~~~~l~~~l---~~g~~~~~e~ 205 (782)
|+++++||+++|.+|+++++|++|.+|+|++.+.+ .|.++.+++.... .......+.+.+ ...... .+
T Consensus 1 Ld~l~~Gv~v~D~~~rl~~~N~~~~~l~~~~~~~~~~G~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~ 78 (115)
T PF12860_consen 1 LDSLPQGVAVFDSDGRLVFWNQRFRELFGLPPEMLRPGASFRDLLRRLAERGEFPPGDPEAWVRQRLARLRRRQPR--SF 78 (115)
T ss_pred CCCcCceEEEEcCCCeEEeEcHHHHHHhCCCHHHhcCCCCHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCc--ee
Confidence 57899999999999999999999999999999998 7999887753210 111122233333 333322 33
Q ss_pred EEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHH
Q 003978 206 PAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRA 249 (782)
Q Consensus 206 ~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~ 249 (782)
.....|| .|+.+...|+- +| |+|.++.|||+++++|+
T Consensus 79 ~~~~~dg--r~l~~~~~~~~--~G---g~v~~~~DVT~~~~~E~ 115 (115)
T PF12860_consen 79 ELRLPDG--RWLEVRAQPLP--DG---GFVLTFTDVTERRRAEE 115 (115)
T ss_pred EEECCCC--EEEEEEeEECC--CC---CEEEEEEeCCHHHHhcC
Confidence 3456777 46678888873 45 57899999999998874
No 481
>TIGR02040 PpsR-CrtJ transcriptional regulator PpsR. This model represents the transcriptional regulator PpsR which is strictly associated with photosynthetic proteobacteria and found in photosynthetic operons. PpsR has been reported to be a repressor. These proteins contain a Helix-Turn_Helix motif of the "fis" type (pfam02954).
Probab=98.61 E-value=2.8e-07 Score=105.31 Aligned_cols=118 Identities=18% Similarity=0.263 Sum_probs=87.2
Q ss_pred HHHHHHHHHHcCceeEEEcC-CCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEE
Q 003978 129 DRQYLNILQSMGQSVHIFDL-SDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPA 207 (782)
Q Consensus 129 ~~~~~~ile~~~d~I~v~D~-dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~ 207 (782)
++.|+.+++.++++|+++|. +|+|+++|+++++|+||+.++++|+++.+++++.........+......|.....++.
T Consensus 132 e~r~~~l~e~~~~~i~~~d~~~g~i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~- 210 (442)
T TIGR02040 132 ETRYRVVLEVSSDAVLLVDMSTGRIVEANSAAAALLGGVGQSLVGRAFPQEFEGRRREELMLTLRNVRATGSAAPVRIL- 210 (442)
T ss_pred HHHHHHHHhhCCceEEEEECCCCEEEEEcHHHHHHhCcCHHHHcCCCHHHhCCHHHHHHHHHHHHHHHhcCCCcceEEE-
Confidence 46789999999999999998 7999999999999999999999999999988776544334445555666665544444
Q ss_pred EcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHH
Q 003978 208 KTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAAL 251 (782)
Q Consensus 208 ~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L 251 (782)
..++|.. | .+.+.++.. +|. ..+++.++|||+++++++++
T Consensus 211 ~~~~~~~-~-~~~~~~~~~-~~~-~~~l~~~~dit~~~~~e~~~ 250 (442)
T TIGR02040 211 LRRSQKR-L-LVVVSVFRQ-DGE-SLFLCQLSPAGATQPVGDEL 250 (442)
T ss_pred EcCCCeE-E-EEEEEEEEe-CCc-eEEEEEEcccchhhhhhHHH
Confidence 3344433 3 345556653 343 35677899999998877654
No 482
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.57 E-value=3e-07 Score=95.28 Aligned_cols=135 Identities=27% Similarity=0.252 Sum_probs=96.5
Q ss_pred eeEeeeeccCCcEEEEEEEE-cCCeEEEEEEecc-------C-----------CC--HHHHHHHHHHHHHHHhCCCC--c
Q 003978 507 LTIGEQIGQGSCGTVYHAVW-YGSDVAVKVFSRQ-------E-----------YS--DEVIHSFRQEVSLMKRLRHP--N 563 (782)
Q Consensus 507 y~i~~~IG~G~~G~Vy~~~~-~~~~vAiK~~~~~-------~-----------~~--~~~~~~~~~Ei~il~~l~Hp--n 563 (782)
+.++.+||.|--+.||.|.. ++.++|||.=+.. + .+ .-......+|.++|..|.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 45788999999999999998 5899999974211 0 00 12335678899999999644 6
Q ss_pred eeEEeeeeecCCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc
Q 003978 564 VLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT 643 (782)
Q Consensus 564 Iv~l~~~~~~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~ 643 (782)
|++.+++ +...+||||++|-.|+..-- .....-.++..|+.-+.-+-..| |||+|+.+-||+++++|.
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r~------~~en~~~il~~il~~~~~~~~~G--iVHGDlSefNIlV~~dg~ 240 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLRL------DVENPDEILDKILEEVRKAYRRG--IVHGDLSEFNILVTEDGD 240 (304)
T ss_pred CCCcccc----ccceeeeehcccceeecccC------cccCHHHHHHHHHHHHHHHHHcC--ccccCCchheEEEecCCC
Confidence 7777775 45689999999877765431 12222233334444444444567 999999999999999999
Q ss_pred EEEEecCCCc
Q 003978 644 VKVGDFGLSR 653 (782)
Q Consensus 644 vkL~DFGla~ 653 (782)
+.++||--+.
T Consensus 241 ~~vIDwPQ~v 250 (304)
T COG0478 241 IVVIDWPQAV 250 (304)
T ss_pred EEEEeCcccc
Confidence 9999996554
No 483
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.53 E-value=1e-06 Score=90.10 Aligned_cols=105 Identities=30% Similarity=0.304 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHhCCCC--ceeEEeeeeecC----CceeEEEeecCCC-CHHHHHhhcCCcchHHHHHHHHHHHHHHHHhh
Q 003978 547 HSFRQEVSLMKRLRHP--NVLLFMGAVTSP----QRLCIVTEFLPRG-SLFRLLQRNTTKLDWRRRILMALDIARGVSYL 619 (782)
Q Consensus 547 ~~~~~Ei~il~~l~Hp--nIv~l~~~~~~~----~~~~lv~E~~~gg-sL~~~l~~~~~~l~~~~~~~i~~qll~aL~~L 619 (782)
.+..+|...+..|..- .++..+++.+.. ...+||+|++++. +|.+++..... .+......++.+++..+.-|
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-~~~~~~~~ll~~l~~~i~~l 134 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-LDPSQRRELLRALARLIAKL 134 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-cchhhHHHHHHHHHHHHHHH
Confidence 4567788877776422 234555555432 2458999999874 79999876332 55667778889999999999
Q ss_pred hcCCCCeeecCCCCCcEEEcCCC---cEEEEecCCCcc
Q 003978 620 HHCNPPIIHRDLKSSNLLVDKHW---TVKVGDFGLSRL 654 (782)
Q Consensus 620 H~~~~~ivHrDIKp~NILl~~~~---~vkL~DFGla~~ 654 (782)
|..| |+|+|+++.||||+.++ .+.|+||+-++.
T Consensus 135 H~~g--i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 135 HDAG--IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHCc--CCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 9999 99999999999999887 899999997654
No 484
>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL. NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes.
Probab=98.46 E-value=1.6e-07 Score=107.57 Aligned_cols=153 Identities=8% Similarity=0.032 Sum_probs=100.7
Q ss_pred HHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEE-EEEEE
Q 003978 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWT-GQFPA 207 (782)
Q Consensus 129 ~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~-~e~~~ 207 (782)
...++.++++++++|+++|.+|+|+++|+++++++|+...+..+..+..++.+.... .+......+..+. .+...
T Consensus 129 ~~~~~~~~~~~~~~i~~~d~~~~i~~~N~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 204 (494)
T TIGR02938 129 KLLIESVVDAAPVAFVLLDPTGRVILDNQEYKKLATDLRVKEPAHTVLDLLREAWRE----ALAENWPQQLAFSNREARF 204 (494)
T ss_pred HHHHHHHHhcccceEEEEcCCCCEEEechhHHHhhchhhhhHHHHHHHHHhhHHhhh----hhhhcchhhhccccceeee
Confidence 356789999999999999999999999999999999998888777665555433211 1111111222222 23344
Q ss_pred EcCCCC-EEEEEEEEEEEECCCCCE---------EEEEEEEEehhHHHHHHHHHHHhhccc---cccccCCchhHHHHHh
Q 003978 208 KTKTEE-RVLVVATNTPFYDDDGTL---------VGIVCVSTDSRPFQETRAALWDTKNSD---TDSNINRPRNTVTAKL 274 (782)
Q Consensus 208 ~~kdG~-~~~v~~~~~Pi~d~~G~v---------~g~v~i~rDITerk~~E~~L~~~~~~~---~~~~i~~~~~gl~~~l 274 (782)
...+|. .+|+.....|+.+.+|.+ .+++++++|||++|+.|++++....++ .........+ ++...
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DITe~k~~ee~l~~~al~~~~~~~~~~~~l~~-~~~~~ 283 (494)
T TIGR02938 205 DRGGGRPARWLSCTGSVIGMESDCADSFFCAAEQPYLLLTIADISNLREEQERARLSALQALMAEEERLEAIRE-TLSAA 283 (494)
T ss_pred ccCCCceeeEEEecCceEEeecchhhheeccCCCchheehHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 445554 789999888887666543 345678999999999998775432221 1111112222 45566
Q ss_pred CCCchhHHHHHH
Q 003978 275 GLDSQQPLQATI 286 (782)
Q Consensus 275 ~~d~~qpL~~~i 286 (782)
.|++++||+.+.
T Consensus 284 ~h~lr~pL~~i~ 295 (494)
T TIGR02938 284 IHRLQGPMNLIS 295 (494)
T ss_pred HHHHhcHHHHHH
Confidence 699999997743
No 485
>PRK09902 hypothetical protein; Provisional
Probab=98.41 E-value=3.7e-06 Score=85.29 Aligned_cols=138 Identities=17% Similarity=0.097 Sum_probs=100.5
Q ss_pred ccCCcEEEEEEEEcCCeEEEEEEeccCC---C-HHHHHHHHHHHHHHHhCCCC--ceeEEeeeee--cC--CceeEEEee
Q 003978 514 GQGSCGTVYHAVWYGSDVAVKVFSRQEY---S-DEVIHSFRQEVSLMKRLRHP--NVLLFMGAVT--SP--QRLCIVTEF 583 (782)
Q Consensus 514 G~G~~G~Vy~~~~~~~~vAiK~~~~~~~---~-~~~~~~~~~Ei~il~~l~Hp--nIv~l~~~~~--~~--~~~~lv~E~ 583 (782)
|+|+.+.|+...+.|..+-+|.-..... . +--...|.+|+..|+.|..- .+++++.... .+ ...+||+|-
T Consensus 27 ~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVTe~ 106 (216)
T PRK09902 27 RRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTED 106 (216)
T ss_pred CCCCcceEEEEEeCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEEEe
Confidence 6799999999998888888886531100 0 11236788899998888422 2444442211 11 235799998
Q ss_pred cCC-CCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc--EEEEecCCCc
Q 003978 584 LPR-GSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT--VKVGDFGLSR 653 (782)
Q Consensus 584 ~~g-gsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~--vkL~DFGla~ 653 (782)
++| -+|.+++.... .+.+......++.+++..+.-||+.| +.|+|+-+.||+++.++. |+++||.-++
T Consensus 107 L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~G--v~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 107 MAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVN--RQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred CCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCC--CcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 854 48999886532 34567777788999999999999999 999999999999986667 9999998665
No 486
>COG3852 NtrB Signal transduction histidine kinase, nitrogen specific [Signal transduction mechanisms]
Probab=98.40 E-value=3.2e-06 Score=88.07 Aligned_cols=137 Identities=20% Similarity=0.155 Sum_probs=105.0
Q ss_pred HHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEE-EEEEEcCC
Q 003978 133 LNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTG-QFPAKTKT 211 (782)
Q Consensus 133 ~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~-e~~~~~kd 211 (782)
..+|+++..+|+++|.+|.|.|+|++|+.+||.+...+.|..+..+++.... ...-+.++...+.++.. ++.+. .+
T Consensus 10 ~~~Ln~~~~pVl~vd~~~~i~yaN~aAe~~~~~Sa~~L~~~~l~~l~~~gs~--ll~ll~q~~~~~~~~~~~~v~l~-~~ 86 (363)
T COG3852 10 GAILNNLINPVLLVDDELAIHYANPAAEQLLAVSARRLAGTRLSELLPFGSL--LLSLLDQVLERGQPVTEYEVTLV-IL 86 (363)
T ss_pred HhHHhccCCceEEEcCCCcEEecCHHHHHHHHHHHHHHhcCChHHHcCCCcH--HHHHHHHHHHhcCCcccceeeee-ec
Confidence 4689999999999999999999999999999999999999999999987754 23345667777776533 44444 78
Q ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHhhccccccccCCchhHHHHHhCCCchhHH
Q 003978 212 EERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPL 282 (782)
Q Consensus 212 G~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~i~~~~~gl~~~l~~d~~qpL 282 (782)
|....+++++.|+-...|- ++..+..+....++.+++.+.... .+..++...++|+++.||
T Consensus 87 g~~~~v~~~v~~v~~~~G~---vlle~~~~~~~~ridre~~q~a~~-------~a~~~L~r~LAHEIKNPL 147 (363)
T COG3852 87 GRSHIVDLTVAPVPEEPGS---VLLEFHPRDMQRRLDREQTQHAQQ-------RAVKGLVRGLAHEIKNPL 147 (363)
T ss_pred CccceEEEEEeeccCCCCe---EEEEechhHHHhHhhHHHHHHHHH-------HHHHHHHHHHHHHhcCcc
Confidence 9999999999999876764 567788888777777765443221 233456777777776666
No 487
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.38 E-value=4.2e-06 Score=85.20 Aligned_cols=140 Identities=16% Similarity=0.140 Sum_probs=94.6
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCH-HHHHH------HHHHHHHHHhC---CCCceeEEeeee
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSD-EVIHS------FRQEVSLMKRL---RHPNVLLFMGAV 571 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~-~~~~~------~~~Ei~il~~l---~HpnIv~l~~~~ 571 (782)
+...+|++.+.+-......|.+....+..+++|..+...... ..... ..+.+..+..+ .-..++.++.+.
T Consensus 28 i~~~~~~~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 28 ILDNNYKIIKVFKNTKRNYVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred HHhCCceEEEeecCCCccEEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 455789999999888888999999999999999876543221 11111 22233333333 222333333333
Q ss_pred ec-----CCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEE
Q 003978 572 TS-----PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKV 646 (782)
Q Consensus 572 ~~-----~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL 646 (782)
+. -...+|+|||++|..|.++.. +++ .+...+..++.-||+.| ++|+|..|.|++++++ .+++
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~-----i~e----~~~~ki~~~ikqlH~~G--~~HGD~hpgNFlv~~~-~i~i 175 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIED-----IDE----DLAEKIVEAIKQLHKHG--FYHGDPHPGNFLVSNN-GIRI 175 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccchh-----cCH----HHHHHHHHHHHHHHHcC--CccCCCCcCcEEEECC-cEEE
Confidence 22 234568999999988866542 222 13345677889999999 9999999999999976 5999
Q ss_pred EecCCCc
Q 003978 647 GDFGLSR 653 (782)
Q Consensus 647 ~DFGla~ 653 (782)
+||+..+
T Consensus 176 ID~~~k~ 182 (229)
T PF06176_consen 176 IDTQGKR 182 (229)
T ss_pred EECcccc
Confidence 9998654
No 488
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.37 E-value=4e-06 Score=86.98 Aligned_cols=136 Identities=15% Similarity=0.205 Sum_probs=83.9
Q ss_pred eeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCc--eeEEeeeeecCCceeEEEeecCCCC
Q 003978 511 EQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPN--VLLFMGAVTSPQRLCIVTEFLPRGS 588 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~Hpn--Iv~l~~~~~~~~~~~lv~E~~~ggs 588 (782)
.+||.|..+.||+. .+..+++|+..... .. ..+.+|.++++.+..-. +++.+.+....+...+|||+++|..
T Consensus 7 ~~i~~G~t~~~y~~--~~~~~VlR~~~~~~-~~---~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~ 80 (226)
T TIGR02172 7 TQTGEGGNGESYTH--KTGKWMLKLYNPGF-DK---ETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR 80 (226)
T ss_pred eeecCCCCcceeEe--cCCCEEEEeCCCCC-CH---HHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence 56899999999984 36678899876533 22 34577999998875332 4677777777777889999998863
Q ss_pred -HHHHH--------------hh-----cCC---cchHHHHHH-HHH----------HHHH-HHHhh--hcCCCCeeecCC
Q 003978 589 -LFRLL--------------QR-----NTT---KLDWRRRIL-MAL----------DIAR-GVSYL--HHCNPPIIHRDL 631 (782)
Q Consensus 589 -L~~~l--------------~~-----~~~---~l~~~~~~~-i~~----------qll~-aL~~L--H~~~~~ivHrDI 631 (782)
+...+ .. +.. ......... +.. .+.. ...+| +.....++|+|+
T Consensus 81 ~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~ 160 (226)
T TIGR02172 81 SFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDF 160 (226)
T ss_pred chhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCC
Confidence 21111 00 000 001000000 000 0001 11111 222334799999
Q ss_pred CCCcEEEcCCCcEEEEecCCCc
Q 003978 632 KSSNLLVDKHWTVKVGDFGLSR 653 (782)
Q Consensus 632 Kp~NILl~~~~~vkL~DFGla~ 653 (782)
.|.||+++.++ +.|+||+.+.
T Consensus 161 ~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 161 QIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CCCcEEEcCCC-cEEEechhcC
Confidence 99999999988 9999999875
No 489
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.33 E-value=3.1e-06 Score=86.99 Aligned_cols=140 Identities=18% Similarity=0.219 Sum_probs=82.7
Q ss_pred eeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCC--ceeEEeeeee---cCCceeEEEeec
Q 003978 510 GEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHP--NVLLFMGAVT---SPQRLCIVTEFL 584 (782)
Q Consensus 510 ~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~Hp--nIv~l~~~~~---~~~~~~lv~E~~ 584 (782)
++.|+.|..+.||++...+..+++|+.... .....+.+|..+++.+... .+++++.... .....+++|+++
T Consensus 2 i~~l~~G~~n~~~~v~~~~~~~vlK~~~~~----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i 77 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDDGRYVLKFYRPP----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYI 77 (239)
T ss_dssp EEEEEESSSSEEEEEEETTSEEEEEEESSH----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEE
T ss_pred CccCCCCCeeeEEEEEECCcEEEEEEeCCC----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEe
Confidence 467999999999999998889999997543 3446677888888887422 3556665432 223468999999
Q ss_pred CCCCHHH----------------HHh---hc--C-CcchH-H--------HHHHH------------HHHHHH-HHHhhh
Q 003978 585 PRGSLFR----------------LLQ---RN--T-TKLDW-R--------RRILM------------ALDIAR-GVSYLH 620 (782)
Q Consensus 585 ~ggsL~~----------------~l~---~~--~-~~l~~-~--------~~~~i------------~~qll~-aL~~LH 620 (782)
+|..+.. .+. .. . ..+.. . ..... ...+.. .+..++
T Consensus 78 ~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (239)
T PF01636_consen 78 PGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELE 157 (239)
T ss_dssp SSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHH
Confidence 9987777 111 00 0 00000 0 00000 011111 223333
Q ss_pred c-----CCCCeeecCCCCCcEEEc-CCCcEEEEecCCCc
Q 003978 621 H-----CNPPIIHRDLKSSNLLVD-KHWTVKVGDFGLSR 653 (782)
Q Consensus 621 ~-----~~~~ivHrDIKp~NILl~-~~~~vkL~DFGla~ 653 (782)
. ....++|+|+.|.|||++ .++.|.|+||+.+.
T Consensus 158 ~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 158 ALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred hhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 1 223499999999999999 66777899998775
No 490
>COG3290 CitA Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms]
Probab=98.33 E-value=2.4e-06 Score=95.81 Aligned_cols=114 Identities=21% Similarity=0.314 Sum_probs=93.8
Q ss_pred HHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChh--hHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEc
Q 003978 132 YLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAE--EALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKT 209 (782)
Q Consensus 132 ~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~e--EliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~ 209 (782)
-.++|+++.+||+.+|+.|.|..+|.+|++|+|+... +.+|+++.++++|..+ +...++.+++...+...+
T Consensus 217 r~A~l~si~EGviAvd~~G~It~~N~~A~~ll~~~~~~~~~ig~~i~~v~~p~~~------l~~vl~~~~~~~~~e~~~- 289 (537)
T COG3290 217 RQAMLQSIKEGVIAVDKKGVITLINQAAQKLLGLRQPSGDPIGRSIVEVLPPDSD------LPEVLETGKPQHDEEIRI- 289 (537)
T ss_pred HHHHHHHhhceEEEECCCCeEeehhHHHHHHhcccCcCcccccccceEeeccccC------cHHHHhcCCcccchhhhc-
Confidence 3467899999999999999999999999999999765 7999999999997544 556678888765544322
Q ss_pred CCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHhhc
Q 003978 210 KTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKN 256 (782)
Q Consensus 210 kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~ 256 (782)
+| .++.++..||+ .+|+++|+|..|||-|+.+++-++|...++
T Consensus 290 -ng--~~~i~nr~pI~-~~~~~~GaI~tFRdktei~~L~eqLt~vr~ 332 (537)
T COG3290 290 -NG--RLLVANRVPIR-SGGQIVGAIITFRDKTEIKKLTEQLTGVRQ 332 (537)
T ss_pred -CC--eEEEEEeccEE-ECCEEeEEEEEEecHHHHHHHHHHHHHHHH
Confidence 34 46678888998 678999999999999999999999976554
No 491
>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism]
Probab=98.32 E-value=2.2e-06 Score=94.93 Aligned_cols=117 Identities=15% Similarity=0.185 Sum_probs=97.1
Q ss_pred HHHHHHHHHcC--ceeEEEc-C---CCcEEEecHHHHHHhCCChhhHcCCCcc--ccccccccccHHHHHHHHHHcCCeE
Q 003978 130 RQYLNILQSMG--QSVHIFD-L---SDRIIYWNRSAELLYGYSAEEALGQDAI--ELLTDGRDFDVAYDIVHRIKMGERW 201 (782)
Q Consensus 130 ~~~~~ile~~~--d~I~v~D-~---dG~Ii~vN~aae~l~Gys~eEliG~~~~--~l~~~~~~~~~~~~l~~~l~~g~~~ 201 (782)
-+++.|+.-.. |.-+++. . |-.|+|+|+.||++.||.+.|+..++|. .+++...+......+.+.++.-+.-
T Consensus 14 TFLENiiRRsn~~dtsFlL~NAQiVD~PiVY~NdgFcKlsGY~RAevMQKs~tc~FMyGEltdk~ti~k~~~t~eN~~~~ 93 (971)
T KOG0501|consen 14 TFLENIIRRSNNADTSFLLANAQIVDWPIVYCNDGFCKLSGYHRAEVMQKSCTCSFMYGELTDKGTIEKVRQTLENYETN 93 (971)
T ss_pred hHHHHHHhhccCCCcceeeccceeeccceEEecCcchhccCccHHHHhcccceeeeeeccccchhhHHHHHHHHHhhhhc
Confidence 45777766554 5545433 2 5789999999999999999999998865 3445555566777888889888888
Q ss_pred EEEEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHH
Q 003978 202 TGQFPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQE 246 (782)
Q Consensus 202 ~~e~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~ 246 (782)
..++.++.|+....|+.+.+.||+++...|+-+++.|+|||..|+
T Consensus 94 qfEillyKKN~TPvW~~vqiAPIrNe~d~VVLfLctFkDIT~~KQ 138 (971)
T KOG0501|consen 94 QFEILLYKKNRTPVWLLVQIAPIRNEKDKVVLFLCTFKDITALKQ 138 (971)
T ss_pred ceeeEeeecCCCceEEEEEeecccCCCceEEEEEeecccchhhcC
Confidence 889999999999999999999999999999999999999999874
No 492
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.27 E-value=2.7e-06 Score=97.72 Aligned_cols=151 Identities=23% Similarity=0.264 Sum_probs=94.3
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEc-CCeEEEEEEeccC---------------------------CC-----HHHHH
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWY-GSDVAVKVFSRQE---------------------------YS-----DEVIH 547 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~-~~~vAiK~~~~~~---------------------------~~-----~~~~~ 547 (782)
+..+..|.. +.|+.++-|.||+|+.. |+.||||+.++.- +. ++..+
T Consensus 122 ee~F~eF~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~ 200 (517)
T COG0661 122 EELFSEFEP-EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEK 200 (517)
T ss_pred HHHHHHcCC-CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHH
Confidence 334444542 68999999999999986 8999999975421 11 11112
Q ss_pred H------HHHHHHHHHhCC-----CCceeEEeeeeecCCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHH
Q 003978 548 S------FRQEVSLMKRLR-----HPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGV 616 (782)
Q Consensus 548 ~------~~~Ei~il~~l~-----HpnIv~l~~~~~~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL 616 (782)
. +.+|...+..++ .++|.-..=+++--..-.|+|||++|..+.+...-....++...+.....++.-
T Consensus 201 ~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~-- 278 (517)
T COG0661 201 RLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFL-- 278 (517)
T ss_pred HHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHH--
Confidence 2 333444444442 344433223333334558999999999888885322233443433333322221
Q ss_pred HhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 617 SYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 617 ~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
..+=..| ++|.|..|.||+++.+|++.+.|||+.....
T Consensus 279 ~q~~~dg--ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 279 RQLLRDG--FFHADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred HHHHhcC--ccccCCCccceEEecCCcEEEEcCcceecCC
Confidence 2222347 9999999999999999999999999976443
No 493
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.25 E-value=1.7e-07 Score=106.05 Aligned_cols=234 Identities=20% Similarity=0.217 Sum_probs=153.5
Q ss_pred eeeccCCcEEEEEEEEcCCe-EEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCc-eeEEeeeeecCCceeEEEeecCCC-
Q 003978 511 EQIGQGSCGTVYHAVWYGSD-VAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPN-VLLFMGAVTSPQRLCIVTEFLPRG- 587 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~~~~~-vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~Hpn-Iv~l~~~~~~~~~~~lv~E~~~gg- 587 (782)
..+++|+++++||.+...+. ...+++... ....-++++|.+++||| .+..++-++.+...++.|+++.++
T Consensus 248 h~fvK~altknpKkRptaeklL~h~fvs~~-------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~r 320 (829)
T KOG0576|consen 248 HNFVKGALTKNPKKRPTAEKLLQHPFVSQT-------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGR 320 (829)
T ss_pred HHHHHHHhcCCCccCCChhhheeceeeccc-------hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCc
Confidence 44689999999998754332 224444322 33455899999999999 777777777788899999999876
Q ss_pred CHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCCC
Q 003978 588 SLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKG 667 (782)
Q Consensus 588 sL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~G 667 (782)
+....+......+..-....+.+.-++++++||+.- =+|+| ||+..+ +.+++.||+......... ...+..+
T Consensus 321 s~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~--~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~-~~~t~~~ 392 (829)
T KOG0576|consen 321 SSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSY--KVHRD----NILGSE-EEVKLLDFAVPPQLTRTM-KPRTAIG 392 (829)
T ss_pred cccccCChhhHhhhhhhhhhhhhhhccccccccccc--ccCcc----cccccc-cccccccccCCcccCccc-ccccCCC
Confidence 332222222222334444556667778999999863 48888 777766 589999999876555443 4456789
Q ss_pred CCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCC--CCCHHHH-HHHHHhhhh
Q 003978 668 TPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPK--DVDPRWA-AIVESCWHS 744 (782)
Q Consensus 668 t~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~--~~~~~l~-~LI~~cL~~ 744 (782)
++.+++||+.....+....|.|++|.-..+|--|.+|-... ......+......+.+.. .+++... ++...|+..
T Consensus 393 ~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P--~~~~~~~g~~p~s~~L~~~~aw~~~~~~~~~~~~~~g 470 (829)
T KOG0576|consen 393 TPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSSP--PAVLPMIGNGPNSPMLTDKSAWSPVFHRDFPAPCLNG 470 (829)
T ss_pred CCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCCC--ccccCCCCCCCCccccchhhhcCcccccCCcccccCC
Confidence 99999999999999999999999999888888887775431 111111111110111111 1112222 366777887
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHh
Q 003978 745 DPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 745 dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
-|..|+..-.. +.+++|
T Consensus 471 ~P~~pkv~mga------cfsKvf 487 (829)
T KOG0576|consen 471 LPPTPKVHMGA------CFSKVF 487 (829)
T ss_pred CCCCCcchhhH------HHHHHh
Confidence 78777776655 445555
No 494
>PRK15053 dpiB sensor histidine kinase DpiB; Provisional
Probab=98.24 E-value=1.9e-05 Score=92.57 Aligned_cols=114 Identities=19% Similarity=0.203 Sum_probs=82.6
Q ss_pred HHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCCh--hhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEE
Q 003978 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSA--EEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPA 207 (782)
Q Consensus 130 ~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~--eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~ 207 (782)
+.++.+++++.+||+++|.+|+|+++|++|++++|+.. ++++|+++.+++++... +..... .......
T Consensus 222 ~~~~~il~~~~egii~~D~~g~I~~~N~~a~~ll~~~~~~~~~~g~~~~~~~~~~~~------~~~~~~-~~~~~~~--- 291 (545)
T PRK15053 222 RQQEALFSSVYEGLIAVDPHGYITAINRNARKMLGLSSPGRQWLGKPIAEVVRPADF------FTEQID-EKRQDVV--- 291 (545)
T ss_pred HHHHHHHHHhCceEEEECCCCeEEeecHHHHHHhCCCCcchhhcCCcHHHhCCCchh------hhhhcC-CcccceE---
Confidence 34567899999999999999999999999999999975 57999999888764321 111111 1111111
Q ss_pred EcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHhhc
Q 003978 208 KTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKN 256 (782)
Q Consensus 208 ~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~ 256 (782)
...+| ..+.++..|+.. +|++.|++.+++|+|+.++++.++.....
T Consensus 292 ~~~~~--~~~~~~~~~i~~-~~~~~G~v~~~~d~te~~~l~~~l~~~~~ 337 (545)
T PRK15053 292 ANFNG--LSVIANREAIRS-GDDLLGAIISFRSKDEISTLNAQLTQIKQ 337 (545)
T ss_pred EEECC--EEEEEEeeeEEE-CCeEEEEEEEEEchHHHHHHHHHHHHHHH
Confidence 12244 345577788875 56788999999999999998888766543
No 495
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.16 E-value=1.9e-05 Score=82.68 Aligned_cols=136 Identities=18% Similarity=0.187 Sum_probs=84.2
Q ss_pred eccCCc-EEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCceeEEEeecCCCCHH
Q 003978 513 IGQGSC-GTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLCIVTEFLPRGSLF 590 (782)
Q Consensus 513 IG~G~~-G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lv~E~~~ggsL~ 590 (782)
|-.|.+ ..||++...+..+.||+..... ...+.+|+++++.+. +--+++++++....+..++|||+++|.+|.
T Consensus 6 ~~~g~~~~~v~~~~~~~~~~~vk~~~~~~-----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 80 (244)
T cd05150 6 VTEGQSGATVYRLDGKNPGLYLKIAPSGP-----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAA 80 (244)
T ss_pred cCCCCCcCeEEEEcCCCCcEEEEecCCCc-----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHh
Confidence 444555 7899998777788999875442 234567888888874 334667888777667789999999987765
Q ss_pred HHHh----------------h-cC-----CcchHH--HHHHH-----------------------HHHHHHHHHhhh--c
Q 003978 591 RLLQ----------------R-NT-----TKLDWR--RRILM-----------------------ALDIARGVSYLH--H 621 (782)
Q Consensus 591 ~~l~----------------~-~~-----~~l~~~--~~~~i-----------------------~~qll~aL~~LH--~ 621 (782)
.... + +. .++... ..+.. ..++...|.... .
T Consensus 81 ~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 160 (244)
T cd05150 81 ALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAE 160 (244)
T ss_pred HhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCc
Confidence 4320 0 00 011100 00000 111111111110 1
Q ss_pred CCCCeeecCCCCCcEEEcCCCcEEEEecCCCc
Q 003978 622 CNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 653 (782)
Q Consensus 622 ~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~ 653 (782)
....++|+|+.|.|||+++++.+.|+||+.+.
T Consensus 161 ~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 161 EDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred CceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 12348999999999999998778899999775
No 496
>PF14598 PAS_11: PAS domain; PDB: 1P97_A 3F1O_A 2A24_A 3H7W_A 3F1P_A 3H82_A 3F1N_A 4F3L_B 4DJ3_A 2KDK_A ....
Probab=98.15 E-value=3.6e-05 Score=70.61 Aligned_cols=95 Identities=22% Similarity=0.307 Sum_probs=78.2
Q ss_pred EEcCCCcEEEecHH-HHHHhCCChhhHcCCCcccccccccccc-HHHHHHHHHHcCCeEEEEEEEEcCCCCEEEEEEEEE
Q 003978 145 IFDLSDRIIYWNRS-AELLYGYSAEEALGQDAIELLTDGRDFD-VAYDIVHRIKMGERWTGQFPAKTKTEERVLVVATNT 222 (782)
Q Consensus 145 v~D~dG~Ii~vN~a-ae~l~Gys~eEliG~~~~~l~~~~~~~~-~~~~l~~~l~~g~~~~~e~~~~~kdG~~~~v~~~~~ 222 (782)
-.+.+|+|+++-.. ...++||.++|++|+.+.+++++++... ........+..|+....-+++..++|..+|+.....
T Consensus 7 rhs~dgki~~~d~~~v~~~lgy~~~eLvG~s~y~~~H~~D~~~~~~~~~~~~~~~g~~~~~~yR~~~k~g~~vwvqt~~~ 86 (111)
T PF14598_consen 7 RHSLDGKITYVDSRAVSSLLGYLPEELVGRSIYDFVHPDDLQRVLKQHHREVLQKGQSVSPYYRFRTKNGGYVWVQTKAT 86 (111)
T ss_dssp EEETTSBEEEEETTHHHHHHSS-HHHHTTSBGGGGBSCCTHHHHHHHHHHHHHHHSSEEEEEEEEE-TTSSEEEEEEEEE
T ss_pred EECCCcEEEEEcCccChhhcCCCcHHHcCCchHHhCCHhhhhhHHHHHHHHHhhCCCcCcceEEEEecCCcEEEEEEEEE
Confidence 36789999999999 5999999999999999999999998764 555677888999988888999999999999999999
Q ss_pred EEECC-CCCEEEEEEEEE
Q 003978 223 PFYDD-DGTLVGIVCVST 239 (782)
Q Consensus 223 Pi~d~-~G~v~g~v~i~r 239 (782)
++.+. .+++..++++-+
T Consensus 87 ~~~n~~~~~~~~Iv~~n~ 104 (111)
T PF14598_consen 87 LFYNPWTSKPEFIVCTNT 104 (111)
T ss_dssp EEEETTTTCEEEEEEEEE
T ss_pred EEECCCCCCccEEEEEEE
Confidence 99864 446666665544
No 497
>PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional
Probab=98.12 E-value=2.1e-05 Score=101.14 Aligned_cols=155 Identities=10% Similarity=0.040 Sum_probs=90.0
Q ss_pred HHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCcccccccccc-ccHHHHHHHHHHcCCeEEEEEEEE
Q 003978 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRD-FDVAYDIVHRIKMGERWTGQFPAK 208 (782)
Q Consensus 130 ~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~-~~~~~~l~~~l~~g~~~~~e~~~~ 208 (782)
++++.++++++++|+++|.+|+|+++|++|++++|+......+........+-.. .................. .....
T Consensus 576 ~~~~~i~~~~~~~i~~~d~~g~i~~~N~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 654 (1197)
T PRK09959 576 SFRKALSDSLPNPTYVVNWQGNVISHNSAFEHYFTADYYKNAMLPLENSDSPFKDVFSNAHEVTAETKENRTIY-TQVFE 654 (1197)
T ss_pred HHHHHHHhhCCCcEEEEcCCCcEEEehHHHHHHhCcccccccccccccccCchhhhHhHHHHHHHHHhhccccc-eeeEe
Confidence 4578899999999999999999999999999999987543333222211111000 000001111111111111 11222
Q ss_pred cCCCCEEEEEE-EEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHhhccccccccCCchhHHHHHhCCCchhHHHHHHH
Q 003978 209 TKTEERVLVVA-TNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQATIA 287 (782)
Q Consensus 209 ~kdG~~~~v~~-~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~i~~~~~gl~~~l~~d~~qpL~~~i~ 287 (782)
..+|...++.. ...+.....+...++++.++|||++++++++++...++.... ......++..++||++.||..++.
T Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dite~~~~~~~l~~~~~~~~~~--~~~~~~~~~~isHelrtPL~~i~~ 732 (1197)
T PRK09959 655 IDNGIEKRCINHWHTLCNLPASDHAVYICGWQDITETRDLIHALEVERNKAINA--TVAKSQFLATMSHEIRTPISSIMG 732 (1197)
T ss_pred eecCccceeeeeeeeeeccCCCCceEEEEEEEehhHHHHHHHHHHHHHHHHHHH--HHHHHHHHHhcChhhCccHHHHHH
Confidence 33343322222 222222223344678888999999999998887665543222 123455899999999999987543
No 498
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.10 E-value=2.4e-05 Score=80.54 Aligned_cols=138 Identities=21% Similarity=0.175 Sum_probs=89.0
Q ss_pred eeccCCcEEEEEEEE-cCCeEEEEEEeccCCC--------------------HHHH--HHHHHHHHHHHhCC--CCceeE
Q 003978 512 QIGQGSCGTVYHAVW-YGSDVAVKVFSRQEYS--------------------DEVI--HSFRQEVSLMKRLR--HPNVLL 566 (782)
Q Consensus 512 ~IG~G~~G~Vy~~~~-~~~~vAiK~~~~~~~~--------------------~~~~--~~~~~Ei~il~~l~--HpnIv~ 566 (782)
.|..|--..||+|.. .+..+|+|+++..... ...+ .=...|+..|+++. +-.+++
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~ 134 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE 134 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 566677778999886 5788999998643211 1111 11234666676663 334455
Q ss_pred EeeeeecCCceeEEEeecCCCC-HHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhc-CCCCeeecCCCCCcEEEcCCCcE
Q 003978 567 FMGAVTSPQRLCIVTEFLPRGS-LFRLLQRNTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHWTV 644 (782)
Q Consensus 567 l~~~~~~~~~~~lv~E~~~ggs-L~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~-~~~~ivHrDIKp~NILl~~~~~v 644 (782)
.+.+. ...|||||+.... -.-.|+ ..++....+..+..++++.+.-|-. .+ +||+||..-|||+. ++.+
T Consensus 135 Pi~~~----~nVLvMEfIg~~g~pAP~Lk--Dv~~e~~e~~~~~~~~v~~~~~l~~~a~--LVHgDLSEyNiL~~-~~~p 205 (268)
T COG1718 135 PIAFR----NNVLVMEFIGDDGLPAPRLK--DVPLELEEAEGLYEDVVEYMRRLYKEAG--LVHGDLSEYNILVH-DGEP 205 (268)
T ss_pred ceeec----CCeEEEEeccCCCCCCCCcc--cCCcCchhHHHHHHHHHHHHHHHHHhcC--cccccchhhheEEE-CCeE
Confidence 55554 3479999995431 111111 1123333556666778888877766 66 99999999999999 7799
Q ss_pred EEEecCCCcccccc
Q 003978 645 KVGDFGLSRLKHET 658 (782)
Q Consensus 645 kL~DFGla~~~~~~ 658 (782)
.|+|||-|....++
T Consensus 206 ~iID~~QaV~~~hp 219 (268)
T COG1718 206 YIIDVSQAVTIDHP 219 (268)
T ss_pred EEEECccccccCCC
Confidence 99999988755543
No 499
>PRK11388 DNA-binding transcriptional regulator DhaR; Provisional
Probab=98.06 E-value=2.3e-05 Score=93.90 Aligned_cols=107 Identities=19% Similarity=0.198 Sum_probs=82.0
Q ss_pred HHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEcCCC
Q 003978 133 LNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTE 212 (782)
Q Consensus 133 ~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG 212 (782)
..+++++.+||+++|.+|+|+++|+++++++|++.++++|+++.++++... .+..++..+............+|
T Consensus 206 ~~il~~~~~gVl~vD~~G~I~~~N~aa~~llg~s~~~l~G~~i~~l~~~~~------~l~~vl~~~~~~~~~~~~l~~~g 279 (638)
T PRK11388 206 NALLESMDDGVIAWDEQGNLQFLNAQAARLLRLDATASQGRAITELLTLPA------VLQQAIKQAHPLKHVEVTFESQG 279 (638)
T ss_pred HHHHhccCCcEEEECCCCeEehhhHHHHHHhCcCHHHHCCCcHHHHhccch------HHHHHHhcCCceeeEEEEEecCC
Confidence 448899999999999999999999999999999999999999999875321 24556777776544333334567
Q ss_pred CEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHH
Q 003978 213 ERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQET 247 (782)
Q Consensus 213 ~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~ 247 (782)
..+++.+++.|+.+..| .+++.+++|++..++.
T Consensus 280 ~~~~~~v~~~Pi~~~~g--~~~v~~l~~~~~~~~~ 312 (638)
T PRK11388 280 QFIDAVITLKPIIEGQG--TSFILLLHPVEQMRQL 312 (638)
T ss_pred ceEEEEEEEEeecccCc--eEEEEEehhhHHHHHH
Confidence 77788999999975444 3466677888776543
No 500
>COG2202 AtoS FOG: PAS/PAC domain [Signal transduction mechanisms]
Probab=98.06 E-value=7e-05 Score=71.33 Aligned_cols=116 Identities=25% Similarity=0.442 Sum_probs=89.5
Q ss_pred HHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHc--CCeEEEEEEEE
Q 003978 131 QYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKM--GERWTGQFPAK 208 (782)
Q Consensus 131 ~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~--g~~~~~e~~~~ 208 (782)
.++.++++++++++++|.+|.|+++|+++++++||+..+.++.....+................... ......+....
T Consensus 113 ~~~~~~~~~~~~~~~~d~~~~~~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (232)
T COG2202 113 RLRALLEASPDGIWVLDEDGRILYANPAAEELLGYSPEEELGRGLSDLIHPEDEERRELELARALAEGRGGPLEIEYRVR 192 (232)
T ss_pred HHHHHHhhCCceEEEEeCCCCEEEeCHHHHHHhCCChHHhcCCChhheEecCCCchhhHHHHHHhhccCCCCcceEEEEE
Confidence 3778999999999999999999999999999999998888888877776544432111122233333 33467788888
Q ss_pred cCCCCE-EEEEEEEEEEECCCCCEEEEEEEEEehhHHHHH
Q 003978 209 TKTEER-VLVVATNTPFYDDDGTLVGIVCVSTDSRPFQET 247 (782)
Q Consensus 209 ~kdG~~-~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~ 247 (782)
.++|.. .++.....+... +|.+.+++....|++++++.
T Consensus 193 ~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~ 231 (232)
T COG2202 193 RKDGERVRWILSRISPVRD-DGEIVGVVGIARDITERKQA 231 (232)
T ss_pred ecCCCEEEEEEeeeeEecC-CCceEEEEEEEechHHHhhc
Confidence 999996 888888777764 78899999999999998764
Done!