Query 003978
Match_columns 782
No_of_seqs 519 out of 3703
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 10:14:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003978.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003978hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9d_A Serine/threonine-protei 100.0 2.2E-55 7.6E-60 480.2 24.7 257 504-769 23-282 (350)
2 4aw0_A HPDK1, 3-phosphoinositi 100.0 7.2E-56 2.5E-60 476.5 18.4 263 504-771 31-298 (311)
3 4fih_A Serine/threonine-protei 100.0 7.4E-55 2.5E-59 475.4 20.7 257 504-772 73-332 (346)
4 3omv_A RAF proto-oncogene seri 100.0 3.7E-54 1.3E-58 463.7 25.5 266 498-767 29-303 (307)
5 3fpq_A Serine/threonine-protei 100.0 1.6E-53 5.4E-58 455.4 25.6 254 507-770 28-289 (290)
6 3hyh_A Carbon catabolite-derep 100.0 1.5E-53 5.1E-58 451.9 24.4 253 505-770 13-269 (275)
7 4g3f_A NF-kappa-beta-inducing 100.0 6.7E-54 2.3E-58 466.4 22.0 254 500-763 53-315 (336)
8 4aoj_A High affinity nerve gro 100.0 5.4E-53 1.8E-57 459.9 29.1 260 500-764 36-319 (329)
9 3ubd_A Ribosomal protein S6 ki 100.0 9.6E-55 3.3E-59 467.3 14.7 256 504-770 23-288 (304)
10 4fie_A Serine/threonine-protei 100.0 3.6E-53 1.2E-57 473.1 25.3 257 504-772 150-409 (423)
11 4asz_A BDNF/NT-3 growth factor 100.0 5.2E-53 1.8E-57 454.0 25.1 260 500-764 8-289 (299)
12 4gt4_A Tyrosine-protein kinase 100.0 3.1E-52 1E-56 449.8 24.2 257 501-761 22-303 (308)
13 4ase_A Vascular endothelial gr 100.0 2.1E-51 7.3E-56 451.0 23.3 264 498-764 57-347 (353)
14 4b99_A Mitogen-activated prote 100.0 7.1E-50 2.4E-54 446.1 26.0 258 504-771 53-352 (398)
15 4g31_A Eukaryotic translation 100.0 4.4E-50 1.5E-54 431.5 19.5 254 505-771 5-287 (299)
16 3hmm_A TGF-beta receptor type- 100.0 8.4E-49 2.9E-53 422.7 20.8 255 505-764 3-297 (303)
17 4f9c_A Cell division cycle 7-r 100.0 8.5E-48 2.9E-52 424.5 25.3 253 503-771 19-360 (361)
18 3v5w_A G-protein coupled recep 100.0 8.8E-48 3E-52 448.4 25.6 256 502-770 186-456 (689)
19 3uto_A Twitchin; kinase, muscl 100.0 1.2E-47 4E-52 447.8 25.9 260 503-773 155-420 (573)
20 3p86_A Serine/threonine-protei 100.0 3.6E-46 1.2E-50 402.9 28.5 268 498-765 30-299 (309)
21 3fe3_A MAP/microtubule affinit 100.0 3.5E-45 1.2E-49 398.7 26.6 259 501-771 11-272 (328)
22 1o6l_A RAC-beta serine/threoni 100.0 6.8E-45 2.3E-49 398.0 24.1 257 503-770 3-267 (337)
23 2psq_A Fibroblast growth facto 100.0 3E-44 1E-48 397.8 29.2 263 499-765 75-365 (370)
24 3zgw_A Maternal embryonic leuc 100.0 1.2E-44 4.1E-49 397.6 24.7 260 499-770 4-267 (347)
25 3fxz_A Serine/threonine-protei 100.0 1.5E-44 5.1E-49 387.7 24.7 259 502-772 17-278 (297)
26 3niz_A Rhodanese family protei 100.0 2.4E-44 8.3E-49 388.6 25.7 263 501-772 17-309 (311)
27 3txo_A PKC-L, NPKC-ETA, protei 100.0 5.2E-45 1.8E-49 401.5 20.1 258 502-770 20-287 (353)
28 3kmu_A ILK, integrin-linked ki 100.0 5E-44 1.7E-48 375.5 24.1 259 501-764 6-270 (271)
29 4dc2_A Protein kinase C IOTA t 100.0 7.7E-44 2.6E-48 397.8 25.2 258 502-770 49-325 (396)
30 3a62_A Ribosomal protein S6 ki 100.0 1E-43 3.5E-48 386.6 25.1 258 502-770 14-283 (327)
31 3a8x_A Protein kinase C IOTA t 100.0 1.5E-43 5.3E-48 388.5 26.6 257 503-770 7-282 (345)
32 3kul_A Ephrin type-A receptor 100.0 2.1E-43 7E-48 383.8 26.9 263 499-765 43-314 (325)
33 4hcu_A Tyrosine-protein kinase 100.0 2.5E-43 8.6E-48 371.3 26.7 260 499-764 4-266 (269)
34 3o0g_A Cell division protein k 100.0 1.5E-43 5.2E-48 377.9 25.2 258 505-771 2-290 (292)
35 3soa_A Calcium/calmodulin-depe 100.0 1.5E-43 5.2E-48 401.4 26.7 259 502-769 8-273 (444)
36 1fot_A TPK1 delta, CAMP-depend 100.0 8.9E-44 3.1E-48 386.0 23.6 253 503-769 4-264 (318)
37 3lb7_A RAF proto-oncogene seri 100.0 1.8E-43 6.2E-48 381.2 25.8 265 498-766 29-302 (307)
38 1ob3_A PFPK5, cell division co 100.0 4.6E-44 1.6E-48 381.3 20.9 257 505-770 2-287 (288)
39 1xjd_A Protein kinase C, theta 100.0 2.6E-44 8.8E-49 394.7 19.4 258 502-770 14-276 (345)
40 2zv2_A Calcium/calmodulin-depe 100.0 9.6E-44 3.3E-48 380.5 23.1 256 503-768 11-297 (298)
41 2yab_A Death-associated protei 100.0 1.5E-43 5.1E-48 391.0 25.0 258 502-769 9-278 (361)
42 2i0e_A Protein kinase C-beta I 100.0 6.5E-44 2.2E-48 392.7 21.7 257 502-769 17-282 (353)
43 1tki_A Titin; serine kinase, m 100.0 1.3E-43 4.5E-48 385.0 23.8 258 503-772 3-266 (321)
44 2bdw_A Hypothetical protein K1 100.0 2.1E-43 7.3E-48 389.9 25.6 258 503-770 27-291 (362)
45 2r5t_A Serine/threonine-protei 100.0 1.1E-43 3.6E-48 393.9 22.8 262 502-770 35-300 (373)
46 3cbl_A C-FES, proto-oncogene t 100.0 1.1E-43 3.8E-48 394.0 22.8 263 499-765 108-375 (377)
47 4ejn_A RAC-alpha serine/threon 100.0 5.8E-44 2E-48 405.1 20.4 259 501-770 144-411 (446)
48 3kk8_A Calcium/calmodulin depe 100.0 1.3E-42 4.3E-47 368.4 29.3 267 503-779 4-277 (284)
49 3s95_A LIMK-1, LIM domain kina 100.0 2.7E-43 9.1E-48 379.2 24.4 262 503-768 8-286 (310)
50 3vhe_A Vascular endothelial gr 100.0 2.5E-43 8.4E-48 386.9 24.5 269 495-766 12-357 (359)
51 3gen_A Tyrosine-protein kinase 100.0 6.5E-43 2.2E-47 370.7 26.7 261 498-764 17-280 (283)
52 3sxs_A Cytoplasmic tyrosine-pr 100.0 4.3E-43 1.5E-47 369.1 24.5 259 500-764 3-264 (268)
53 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.8E-43 6.3E-48 388.7 22.2 254 502-769 38-299 (350)
54 1mp8_A Focal adhesion kinase 1 100.0 7E-43 2.4E-47 370.6 25.4 264 498-766 8-278 (281)
55 3dtc_A Mitogen-activated prote 100.0 4.3E-43 1.5E-47 369.4 23.3 258 501-762 3-271 (271)
56 1luf_A Muscle-specific tyrosin 100.0 4.2E-43 1.4E-47 382.3 24.0 266 498-767 40-338 (343)
57 2pmi_A Negative RE, cyclin-dep 100.0 2E-43 6.8E-48 382.3 21.2 265 505-779 5-309 (317)
58 3c0i_A Peripheral plasma membr 100.0 2.7E-43 9.3E-48 387.1 22.4 259 503-770 22-293 (351)
59 2y0a_A Death-associated protei 100.0 6.3E-43 2.2E-47 380.2 24.9 260 501-770 7-278 (326)
60 3tt0_A Basic fibroblast growth 100.0 2E-42 6.7E-47 384.6 29.2 264 499-766 63-354 (382)
61 3gni_B Strad alpha; kinase fol 100.0 1.1E-42 3.9E-47 387.0 26.2 264 501-772 21-342 (389)
62 2vd5_A DMPK protein; serine/th 100.0 1.7E-43 5.9E-48 397.1 19.7 261 501-770 57-334 (412)
63 3v8s_A RHO-associated protein 100.0 1.4E-43 4.7E-48 397.7 18.7 260 501-770 65-336 (410)
64 2owb_A Serine/threonine-protei 100.0 1.5E-42 5.3E-47 378.2 26.4 259 502-771 38-299 (335)
65 4aw2_A Serine/threonine-protei 100.0 1.5E-43 5.1E-48 400.5 18.7 262 501-770 70-345 (437)
66 4agu_A Cyclin-dependent kinase 100.0 9.6E-43 3.3E-47 374.5 24.2 261 504-773 2-294 (311)
67 4eqm_A Protein kinase; transfe 100.0 1.8E-42 6E-47 370.8 25.8 259 501-762 7-273 (294)
68 3og7_A AKAP9-BRAF fusion prote 100.0 1E-42 3.5E-47 371.1 23.6 262 498-763 17-287 (289)
69 2ivs_A Proto-oncogene tyrosine 100.0 1.8E-42 6.1E-47 372.3 25.7 262 499-764 17-311 (314)
70 3ugc_A Tyrosine-protein kinase 100.0 1.2E-42 3.9E-47 371.3 23.9 262 501-766 6-293 (295)
71 3fdn_A Serine/threonine-protei 100.0 1E-42 3.5E-47 368.7 23.2 263 502-777 6-271 (279)
72 1k9a_A Carboxyl-terminal SRC k 100.0 2E-42 6.7E-47 393.2 26.9 256 499-764 187-445 (450)
73 3t9t_A Tyrosine-protein kinase 100.0 2.8E-42 9.6E-47 362.0 26.0 259 500-764 3-264 (267)
74 4fr4_A YANK1, serine/threonine 100.0 7.4E-43 2.5E-47 388.4 22.7 258 501-770 11-278 (384)
75 1rjb_A FL cytokine receptor; k 100.0 1.5E-42 5.2E-47 378.6 24.7 265 498-765 38-335 (344)
76 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.2E-43 4.1E-48 388.0 15.9 255 503-770 7-265 (336)
77 2eue_A Carbon catabolite derep 100.0 8.1E-43 2.8E-47 368.7 21.6 258 502-772 10-271 (275)
78 1t46_A HOMO sapiens V-KIT hard 100.0 2.7E-42 9.3E-47 370.7 26.1 265 498-765 16-308 (313)
79 1u59_A Tyrosine-protein kinase 100.0 6.7E-42 2.3E-46 364.2 28.4 270 501-775 5-283 (287)
80 2w4o_A Calcium/calmodulin-depe 100.0 1.3E-42 4.5E-47 381.5 23.6 258 501-772 49-314 (349)
81 3dbq_A Dual specificity protei 100.0 3.1E-42 1.1E-46 377.0 26.2 263 501-774 5-284 (343)
82 2x4f_A Myosin light chain kina 100.0 3.8E-42 1.3E-46 381.4 27.0 252 508-770 92-349 (373)
83 3cok_A Serine/threonine-protei 100.0 3.5E-43 1.2E-47 371.8 17.8 260 503-772 9-271 (278)
84 1p4o_A Insulin-like growth fac 100.0 1.4E-42 4.7E-47 375.1 22.8 274 499-776 19-311 (322)
85 4f0f_A Serine/threonine-protei 100.0 2.7E-42 9.3E-47 366.7 24.5 256 502-762 16-287 (287)
86 3l9p_A Anaplastic lymphoma kin 100.0 1.7E-42 5.8E-47 383.2 23.7 262 501-766 67-347 (367)
87 2qol_A Ephrin receptor; recept 100.0 1.9E-42 6.5E-47 383.8 23.9 264 499-766 39-311 (373)
88 3qup_A Tyrosine-protein kinase 100.0 1.5E-42 5.2E-47 375.2 22.3 266 499-767 17-302 (323)
89 2c30_A Serine/threonine-protei 100.0 4.4E-42 1.5E-46 372.7 25.9 254 506-771 46-302 (321)
90 3an0_A Dual specificity mitoge 100.0 1.3E-42 4.6E-47 378.7 21.9 268 498-776 44-323 (340)
91 3tki_A Serine/threonine-protei 100.0 8.8E-43 3E-47 378.7 20.2 258 504-771 6-269 (323)
92 3mtl_A Cell division protein k 100.0 6.8E-43 2.3E-47 379.3 19.3 263 505-777 2-295 (324)
93 1kob_A Twitchin; kinase, intra 100.0 3E-42 1E-46 384.1 24.8 259 502-771 48-312 (387)
94 3uc3_A Serine/threonine-protei 100.0 4.5E-42 1.5E-46 379.1 25.7 256 502-770 17-281 (361)
95 1t4h_A Serine/threonine-protei 100.0 6.2E-42 2.1E-46 364.8 25.8 262 499-770 20-289 (290)
96 2xir_A Vascular endothelial gr 100.0 3.1E-42 1.1E-46 370.7 23.7 268 498-768 20-314 (316)
97 3soc_A Activin receptor type-2 100.0 1.6E-42 5.3E-47 376.1 21.5 260 499-765 18-319 (322)
98 3hko_A Calcium/calmodulin-depe 100.0 3.3E-42 1.1E-46 375.8 24.2 267 501-775 22-342 (345)
99 2rku_A Serine/threonine-protei 100.0 8.6E-42 3E-46 364.4 26.5 259 502-771 12-273 (294)
100 3brb_A Proto-oncogene tyrosine 100.0 7.8E-42 2.7E-46 368.0 26.3 271 492-765 21-309 (313)
101 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1E-42 3.6E-47 378.6 19.6 259 503-771 32-326 (329)
102 3p1a_A MYT1 kinase, membrane-a 100.0 3.7E-42 1.3E-46 371.3 23.6 254 502-769 54-310 (311)
103 1u5q_A Serine/threonine protei 100.0 5.9E-42 2E-46 376.3 25.4 255 504-771 53-313 (348)
104 3rp9_A Mitogen-activated prote 100.0 4.4E-42 1.5E-46 390.8 25.2 259 504-772 52-405 (458)
105 1mqb_A Ephrin type-A receptor 100.0 1.5E-41 5.2E-46 370.2 28.3 265 498-766 37-311 (333)
106 2pvf_A Fibroblast growth facto 100.0 1.3E-41 4.5E-46 370.4 27.6 266 498-767 28-321 (334)
107 2y94_A 5'-AMP-activated protei 100.0 2.6E-42 9E-47 394.2 23.1 257 502-770 13-273 (476)
108 3cc6_A Protein tyrosine kinase 100.0 8.9E-42 3.1E-46 361.8 25.5 261 500-765 7-274 (281)
109 2zmd_A Dual specificity protei 100.0 1E-41 3.5E-46 380.1 27.0 260 503-773 54-330 (390)
110 3fme_A Dual specificity mitoge 100.0 2.9E-42 9.8E-47 366.5 21.4 265 500-774 2-277 (290)
111 3kfa_A Tyrosine-protein kinase 100.0 4.9E-42 1.7E-46 364.6 23.1 263 498-766 6-273 (288)
112 4e5w_A Tyrosine-protein kinase 100.0 1E-41 3.4E-46 364.7 25.5 259 502-763 18-301 (302)
113 2wqm_A Serine/threonine-protei 100.0 2.9E-41 1E-45 363.0 29.2 262 503-766 30-299 (310)
114 3oz6_A Mitogen-activated prote 100.0 4.3E-42 1.5E-46 382.4 23.4 259 502-771 6-336 (388)
115 3llt_A Serine/threonine kinase 100.0 6.4E-42 2.2E-46 376.3 24.5 254 500-768 30-360 (360)
116 1cm8_A Phosphorylated MAP kina 100.0 9.8E-42 3.4E-46 377.2 25.8 255 504-772 24-316 (367)
117 2i1m_A Macrophage colony-stimu 100.0 7.5E-42 2.6E-46 371.4 24.4 267 499-768 40-330 (333)
118 1byg_A CSK, protein (C-termina 100.0 5.6E-42 1.9E-46 362.8 22.8 258 499-766 15-275 (278)
119 2vgo_A Serine/threonine-protei 100.0 6.9E-42 2.4E-46 363.2 23.5 259 502-773 11-272 (284)
120 1csn_A Casein kinase-1; phosph 100.0 1.6E-41 5.4E-46 362.2 26.2 259 501-766 6-285 (298)
121 3is5_A Calcium-dependent prote 100.0 8.8E-42 3E-46 363.4 23.5 257 503-770 20-285 (285)
122 4aaa_A Cyclin-dependent kinase 100.0 4.4E-42 1.5E-46 373.6 21.6 260 502-770 22-313 (331)
123 1xbb_A Tyrosine-protein kinase 100.0 1.7E-41 5.8E-46 361.8 25.6 262 501-767 12-282 (291)
124 3f3z_A Calcium/calmodulin-depe 100.0 1.8E-41 6E-46 358.5 25.5 255 503-772 7-270 (277)
125 1qpc_A LCK kinase; alpha beta 100.0 2.1E-41 7.1E-46 358.4 26.1 262 499-767 7-272 (279)
126 2izr_A Casein kinase I isoform 100.0 6.8E-42 2.3E-46 372.0 22.9 256 503-766 7-283 (330)
127 1nxk_A MAP kinase-activated pr 100.0 1.4E-41 4.7E-46 380.4 26.0 253 502-770 58-328 (400)
128 2a2a_A Death-associated protei 100.0 1.1E-41 3.8E-46 368.8 24.4 259 502-770 9-279 (321)
129 3mwu_A Calmodulin-domain prote 100.0 6.7E-42 2.3E-46 392.4 24.0 261 502-773 19-286 (486)
130 3q5i_A Protein kinase; CDPK, m 100.0 1.1E-41 3.6E-46 392.6 25.7 263 502-775 33-313 (504)
131 2x7f_A TRAF2 and NCK-interacti 100.0 1.4E-41 4.9E-46 367.8 25.1 260 501-771 20-294 (326)
132 2w5a_A Serine/threonine-protei 100.0 3.6E-42 1.2E-46 363.9 19.7 263 504-773 5-277 (279)
133 3ork_A Serine/threonine protei 100.0 4.2E-42 1.4E-46 370.5 20.6 251 502-755 9-271 (311)
134 3com_A Serine/threonine-protei 100.0 2.3E-41 7.9E-46 364.2 26.3 258 502-771 26-286 (314)
135 3pfq_A PKC-B, PKC-beta, protei 100.0 4.3E-42 1.5E-46 408.8 22.7 259 501-770 337-604 (674)
136 3c4z_A Rhodopsin kinase; Ser/T 100.0 5.2E-42 1.8E-46 396.8 22.7 258 502-769 182-454 (543)
137 2qr7_A Ribosomal protein S6 ki 100.0 3.6E-42 1.2E-46 377.2 20.2 252 503-769 20-283 (342)
138 3g33_A Cell division protein k 100.0 5E-42 1.7E-46 368.9 20.9 259 502-770 6-303 (308)
139 1qcf_A Haematopoetic cell kina 100.0 8.5E-42 2.9E-46 388.4 23.6 258 498-762 181-442 (454)
140 3lij_A Calcium/calmodulin depe 100.0 1.3E-41 4.3E-46 391.0 25.3 257 503-770 35-298 (494)
141 3f66_A Hepatocyte growth facto 100.0 1.4E-41 4.8E-46 363.1 24.0 261 503-767 23-294 (298)
142 3poz_A Epidermal growth factor 100.0 1.1E-41 3.7E-46 370.3 23.4 259 502-765 12-279 (327)
143 3lxp_A Non-receptor tyrosine-p 100.0 1.7E-41 5.9E-46 367.0 24.6 261 506-771 32-317 (318)
144 4fvq_A Tyrosine-protein kinase 100.0 2.9E-42 9.8E-47 366.6 18.1 254 501-765 4-276 (289)
145 1opk_A P150, C-ABL, proto-onco 100.0 1.4E-41 4.7E-46 390.9 25.2 259 498-762 213-476 (495)
146 3pls_A Macrophage-stimulating 100.0 3E-41 1E-45 360.1 25.9 259 506-768 22-291 (298)
147 3q4u_A Activin receptor type-1 100.0 1.3E-41 4.4E-46 363.4 22.9 252 502-762 5-300 (301)
148 1u46_A ACK-1, activated CDC42 100.0 1.2E-41 4.2E-46 361.8 22.6 261 501-764 14-284 (291)
149 2r3i_A Cell division protein k 100.0 1.3E-41 4.4E-46 363.3 22.8 263 504-775 2-295 (299)
150 3bhy_A Death-associated protei 100.0 1.7E-41 5.7E-46 359.5 23.4 259 504-772 4-274 (283)
151 3op5_A Serine/threonine-protei 100.0 1.6E-41 5.4E-46 374.5 24.0 263 501-766 31-331 (364)
152 1ua2_A CAK, cell division prot 100.0 1.3E-41 4.5E-46 372.5 23.0 260 503-771 8-299 (346)
153 3lxl_A Tyrosine-protein kinase 100.0 2.1E-41 7.2E-46 367.4 24.2 265 503-771 21-310 (327)
154 2h6d_A 5'-AMP-activated protei 100.0 1.6E-41 5.4E-46 358.4 22.6 259 501-771 7-269 (276)
155 3qd2_B Eukaryotic translation 100.0 6.7E-42 2.3E-46 370.1 19.9 254 504-769 5-331 (332)
156 3kex_A Receptor tyrosine-prote 100.0 5E-42 1.7E-46 372.5 18.9 258 502-764 10-276 (325)
157 3eqc_A Dual specificity mitoge 100.0 2.4E-41 8.2E-46 371.9 24.5 260 501-772 29-333 (360)
158 2eva_A TAK1 kinase - TAB1 chim 100.0 3E-41 1E-45 363.6 24.6 253 502-766 5-265 (307)
159 3a7i_A MST3 kinase, serine/thr 100.0 4.1E-41 1.4E-45 360.7 25.4 256 504-771 21-278 (303)
160 3kn6_A Ribosomal protein S6 ki 100.0 8.1E-42 2.8E-46 371.4 20.0 252 504-771 7-278 (325)
161 1x8b_A WEE1HU, WEE1-like prote 100.0 2.1E-41 7.1E-46 358.2 22.5 251 504-770 10-286 (289)
162 3ttj_A Mitogen-activated prote 100.0 1E-41 3.6E-46 388.7 21.8 254 503-769 60-361 (464)
163 3lzb_A Epidermal growth factor 100.0 1.5E-41 5.2E-46 369.5 22.0 258 502-764 12-278 (327)
164 2clq_A Mitogen-activated prote 100.0 1.5E-41 5.1E-46 361.8 21.4 266 497-772 14-287 (295)
165 4euu_A Serine/threonine-protei 100.0 1.7E-41 5.9E-46 366.8 22.2 259 502-764 6-309 (319)
166 2acx_A G protein-coupled recep 100.0 9.7E-42 3.3E-46 395.9 21.6 258 502-770 181-451 (576)
167 3mi9_A Cell division protein k 100.0 2.2E-41 7.5E-46 371.0 23.1 261 503-772 15-320 (351)
168 3nyv_A Calmodulin-domain prote 100.0 7.4E-42 2.5E-46 391.7 20.2 260 502-772 23-290 (484)
169 2j7t_A Serine/threonine-protei 100.0 8.2E-42 2.8E-46 365.4 19.1 260 503-772 17-284 (302)
170 2jam_A Calcium/calmodulin-depe 100.0 5.4E-41 1.8E-45 360.2 25.5 259 503-774 7-272 (304)
171 1fvr_A Tyrosine-protein kinase 100.0 2.7E-41 9.1E-46 366.6 23.2 261 502-767 22-303 (327)
172 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.6E-41 8.8E-46 384.2 23.7 258 498-762 177-438 (452)
173 3n9x_A Phosphotransferase; mal 100.0 7.8E-41 2.7E-45 378.0 27.2 261 503-773 24-371 (432)
174 3dls_A PAS domain-containing s 100.0 7.5E-42 2.6E-46 373.3 18.0 251 503-771 22-282 (335)
175 3lm5_A Serine/threonine-protei 100.0 1.3E-41 4.4E-46 369.7 19.3 263 500-771 23-295 (327)
176 2ozo_A Tyrosine-protein kinase 100.0 7.8E-41 2.7E-45 394.1 27.6 261 501-766 331-600 (613)
177 2y7j_A Phosphorylase B kinase 100.0 9.3E-41 3.2E-45 369.0 26.4 257 502-768 91-364 (365)
178 3c1x_A Hepatocyte growth facto 100.0 1.9E-41 6.6E-46 375.8 20.7 262 505-770 89-361 (373)
179 2qkw_B Protein kinase; three-h 100.0 6.5E-42 2.2E-46 370.4 16.1 262 499-764 33-315 (321)
180 2yfx_A Tyrosine-protein kinase 100.0 6E-41 2E-45 363.9 23.5 262 501-766 26-306 (327)
181 2wtk_C Serine/threonine-protei 100.0 7.5E-41 2.6E-45 358.4 23.4 261 503-774 3-274 (305)
182 2xrw_A Mitogen-activated prote 100.0 1.4E-40 4.7E-45 368.3 26.0 254 503-769 23-324 (371)
183 2v62_A Serine/threonine-protei 100.0 1.6E-41 5.4E-46 371.8 18.1 257 500-762 32-326 (345)
184 3g2f_A Bone morphogenetic prot 100.0 4.1E-41 1.4E-45 365.8 21.2 260 501-769 9-323 (336)
185 1vzo_A Ribosomal protein S6 ki 100.0 1E-41 3.5E-46 375.1 16.7 258 502-770 51-328 (355)
186 3nsz_A CK II alpha, casein kin 100.0 7.5E-41 2.6E-45 362.8 22.9 250 504-771 35-327 (330)
187 2y4i_B KSR2, HKSR2, kinase sup 100.0 4.3E-42 1.5E-46 370.5 12.9 266 497-766 25-304 (319)
188 2h34_A Serine/threonine-protei 100.0 8.9E-41 3.1E-45 360.0 23.1 257 503-762 32-294 (309)
189 2dyl_A Dual specificity mitoge 100.0 1.1E-40 3.7E-45 359.1 23.7 262 498-770 18-290 (318)
190 2yex_A Serine/threonine-protei 100.0 4.7E-41 1.6E-45 354.5 20.4 259 504-772 6-270 (276)
191 3kvw_A DYRK2, dual specificity 100.0 1.8E-40 6.1E-45 374.8 26.5 257 501-772 93-417 (429)
192 3ll6_A Cyclin G-associated kin 100.0 1.4E-40 4.6E-45 360.6 24.4 261 499-766 22-310 (337)
193 3eb0_A Putative uncharacterize 100.0 5.9E-41 2E-45 372.7 22.0 255 502-772 4-330 (383)
194 3mdy_A Bone morphogenetic prot 100.0 1.4E-40 4.9E-45 361.1 24.5 256 501-765 33-332 (337)
195 2h8h_A Proto-oncogene tyrosine 100.0 5.8E-41 2E-45 389.2 22.8 257 499-762 261-521 (535)
196 1phk_A Phosphorylase kinase; g 100.0 1.6E-40 5.6E-45 354.6 24.5 259 503-771 15-291 (298)
197 4exu_A Mitogen-activated prote 100.0 1E-40 3.5E-45 369.2 23.7 255 503-772 40-332 (371)
198 3cek_A Dual specificity protei 100.0 2.4E-40 8.3E-45 356.6 25.9 267 500-777 23-306 (313)
199 2w1i_A JAK2; chromosomal rearr 100.0 1.5E-40 5.3E-45 360.7 24.4 261 502-766 38-324 (326)
200 1j1b_A Glycogen synthase kinas 100.0 6.7E-41 2.3E-45 377.2 22.3 254 504-773 53-346 (420)
201 2fst_X Mitogen-activated prote 100.0 3.4E-41 1.1E-45 373.0 19.3 255 504-772 28-320 (367)
202 3byv_A Rhoptry kinase; malaria 100.0 5.4E-42 1.9E-46 380.2 12.5 249 504-771 72-367 (377)
203 3uzp_A CKI-delta, CKID, casein 100.0 3.2E-40 1.1E-44 351.7 25.5 257 503-766 7-282 (296)
204 4fl3_A Tyrosine-protein kinase 100.0 2.2E-40 7.5E-45 391.5 26.6 259 503-766 366-633 (635)
205 3qyz_A Mitogen-activated prote 100.0 2.1E-40 7.2E-45 365.5 24.7 256 504-771 26-321 (364)
206 4hgt_A Casein kinase I isoform 100.0 3.2E-40 1.1E-44 351.4 25.1 256 504-766 8-282 (296)
207 2ac3_A MAP kinase-interacting 100.0 8.1E-41 2.8E-45 360.3 20.7 255 504-771 11-303 (316)
208 1blx_A Cyclin-dependent kinase 100.0 1.6E-40 5.3E-45 359.4 23.0 262 504-775 10-308 (326)
209 2wei_A Calmodulin-domain prote 100.0 1.3E-40 4.3E-45 354.4 21.5 261 501-772 18-285 (287)
210 2a19_B Interferon-induced, dou 100.0 1.7E-40 5.8E-45 351.3 22.1 254 502-770 8-280 (284)
211 2pml_X PFPK7, Ser/Thr protein 100.0 2.4E-41 8.1E-46 369.5 16.0 259 501-771 27-330 (348)
212 2b9h_A MAP kinase FUS3, mitoge 100.0 4.3E-40 1.5E-44 360.3 25.8 261 503-775 9-317 (353)
213 3q60_A ROP5B; pseudokinase, tr 100.0 2E-41 6.8E-46 374.7 15.3 257 504-772 61-361 (371)
214 2vwi_A Serine/threonine-protei 100.0 2.1E-41 7.3E-46 361.7 14.9 265 498-771 8-295 (303)
215 1z57_A Dual specificity protei 100.0 2E-40 6.7E-45 359.3 22.3 257 501-772 10-337 (339)
216 3pg1_A Mitogen-activated prote 100.0 1.7E-40 5.7E-45 365.3 21.3 262 501-772 18-325 (362)
217 2nru_A Interleukin-1 receptor- 100.0 1.4E-40 4.9E-45 356.9 20.1 254 507-763 33-305 (307)
218 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.3E-40 1.1E-44 363.9 23.2 259 498-769 58-344 (365)
219 3uim_A Brassinosteroid insensi 100.0 1.2E-41 4.2E-46 368.6 11.5 260 499-761 24-308 (326)
220 3i6u_A CDS1, serine/threonine- 100.0 6.8E-41 2.3E-45 377.1 17.8 257 502-769 132-405 (419)
221 2buj_A Serine/threonine-protei 100.0 2E-40 6.9E-45 357.4 20.4 258 501-763 25-305 (317)
222 4e7w_A Glycogen synthase kinas 100.0 2.4E-40 8.3E-45 369.5 21.7 257 501-773 36-331 (394)
223 2jii_A Serine/threonine-protei 100.0 2.8E-40 9.7E-45 362.6 21.8 256 502-767 39-339 (352)
224 1wak_A Serine/threonine-protei 100.0 1.2E-40 4.2E-45 369.6 18.9 253 502-769 34-397 (397)
225 1b6c_B TGF-B superfamily recep 100.0 3.9E-40 1.3E-44 358.7 22.4 256 501-765 38-337 (342)
226 3coi_A Mitogen-activated prote 100.0 4.6E-40 1.6E-44 360.9 22.9 255 503-772 22-314 (353)
227 2ycf_A Serine/threonine-protei 100.0 1.8E-40 6.2E-45 359.3 18.0 250 503-757 8-274 (322)
228 2i6l_A Mitogen-activated prote 100.0 8.2E-40 2.8E-44 351.8 22.8 259 502-773 8-315 (320)
229 2j0j_A Focal adhesion kinase 1 100.0 1.5E-39 5E-44 385.9 27.1 263 498-765 383-652 (656)
230 3e3p_A Protein kinase, putativ 100.0 8.8E-40 3E-44 358.7 22.7 263 501-776 19-327 (360)
231 1zy4_A Serine/threonine-protei 100.0 7.9E-40 2.7E-44 348.9 21.6 253 504-770 5-290 (303)
232 4eut_A Serine/threonine-protei 100.0 2.4E-40 8.2E-45 369.6 18.4 260 502-765 6-310 (396)
233 3aln_A Dual specificity mitoge 100.0 7.2E-40 2.5E-44 355.1 20.8 262 498-771 15-293 (327)
234 2vx3_A Dual specificity tyrosi 100.0 1.3E-39 4.4E-44 361.7 23.3 258 501-771 50-380 (382)
235 3rgf_A Cyclin-dependent kinase 100.0 3.9E-40 1.3E-44 368.8 18.9 259 503-774 18-344 (405)
236 3sv0_A Casein kinase I-like; t 100.0 1.9E-39 6.6E-44 371.2 25.0 256 502-764 4-278 (483)
237 3gxj_A TGF-beta receptor type- 100.0 8.6E-42 2.9E-46 364.8 3.3 252 504-764 2-297 (303)
238 2eu9_A Dual specificity protei 100.0 2.4E-39 8.3E-44 353.4 22.1 256 501-771 15-341 (355)
239 2iwi_A Serine/threonine-protei 100.0 7.5E-40 2.5E-44 352.4 17.6 257 499-774 25-294 (312)
240 3fhr_A MAP kinase-activated pr 100.0 2.1E-39 7.3E-44 353.9 20.9 253 503-771 26-295 (336)
241 3a99_A Proto-oncogene serine/t 100.0 1.2E-39 4.1E-44 353.1 16.5 253 500-771 38-301 (320)
242 1q8y_A SR protein kinase; tran 100.0 3.1E-39 1E-43 355.9 19.0 256 502-772 16-342 (373)
243 3p23_A Serine/threonine-protei 100.0 2.1E-39 7E-44 366.4 14.9 253 502-768 21-288 (432)
244 3uqc_A Probable conserved tran 100.0 2.3E-37 7.9E-42 330.4 20.9 231 502-765 28-266 (286)
245 2rio_A Serine/threonine-protei 100.0 1.8E-37 6.1E-42 350.8 20.9 250 504-768 14-300 (434)
246 3m2w_A MAP kinase-activated pr 100.0 8.1E-37 2.8E-41 327.3 23.8 235 502-773 14-266 (299)
247 3dzo_A Rhoptry kinase domain; 100.0 1.2E-37 4.1E-42 349.9 15.9 241 504-757 77-363 (413)
248 2vuw_A Serine/threonine-protei 100.0 4.1E-39 1.4E-43 350.9 -0.3 246 502-768 17-336 (336)
249 3qa8_A MGC80376 protein; kinas 100.0 1.1E-37 3.6E-42 365.9 10.9 248 504-755 13-295 (676)
250 2pzi_A Probable serine/threoni 100.0 2E-36 6.8E-41 361.1 19.4 247 501-767 76-331 (681)
251 4azs_A Methyltransferase WBDD; 100.0 4.8E-30 1.6E-34 299.1 6.3 184 512-702 241-435 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 1.3E-26 4.6E-31 268.5 7.7 186 508-706 339-539 (540)
253 1zar_A RIO2 kinase; serine kin 99.9 2E-22 7E-27 214.4 7.1 146 505-678 90-252 (282)
254 1zth_A RIO1 serine protein kin 99.8 3.7E-19 1.3E-23 186.6 9.2 138 506-655 48-219 (258)
255 2gj3_A Nitrogen fixation regul 99.8 5.5E-18 1.9E-22 154.4 15.2 118 128-245 3-120 (120)
256 4hia_A LOV protein; PAS, HTH, 99.8 2.8E-18 9.4E-23 166.8 11.6 121 130-250 7-130 (176)
257 2pr5_A Blue-light photorecepto 99.7 2.4E-17 8.3E-22 152.7 16.0 122 134-257 3-127 (132)
258 1n9l_A PHOT-LOV1, putative blu 99.7 1.1E-16 3.6E-21 143.9 14.4 105 139-243 2-109 (109)
259 3p7n_A Sensor histidine kinase 99.7 1.3E-16 4.3E-21 166.1 16.7 126 126-251 59-189 (258)
260 3ue6_A Aureochrome1; PAS/LOV d 99.7 4.9E-16 1.7E-20 148.2 16.9 125 128-252 33-160 (166)
261 3sw1_A Sensory box protein; li 99.7 1.1E-15 3.6E-20 145.5 17.9 133 125-257 20-155 (162)
262 3t50_A Blue-light-activated hi 99.7 3E-16 1E-20 142.9 13.5 119 135-253 2-123 (128)
263 3f1p_B ARYL hydrocarbon recept 99.7 1.6E-16 5.4E-21 144.5 9.0 117 130-246 2-120 (121)
264 3k3c_A Protein RV1364C/MT1410; 99.6 1.8E-15 6E-20 143.9 15.2 128 128-257 15-148 (158)
265 2vv6_A FIXL, sensor protein FI 99.6 1.2E-15 4.1E-20 138.3 12.9 113 139-253 2-118 (119)
266 4eet_B Phototropin-2; LOV, blu 99.6 2.6E-15 8.8E-20 132.8 13.4 110 135-244 2-114 (115)
267 3mqq_A Transcriptional regulat 99.6 9E-16 3.1E-20 139.2 10.1 114 132-247 5-119 (120)
268 3mr0_A Sensory box histidine k 99.6 5.9E-15 2E-19 138.8 15.9 130 127-256 6-137 (142)
269 3lyx_A Sensory BOX/ggdef domai 99.6 5.6E-15 1.9E-19 131.0 13.9 119 129-247 6-124 (124)
270 3f1p_A Endothelial PAS domain- 99.6 1.2E-15 4.3E-20 137.4 9.4 108 139-246 8-116 (117)
271 2z6d_A Phototropin-2; PAS-fold 99.6 8.8E-15 3E-19 130.6 14.8 122 129-250 5-129 (130)
272 2r78_A Sensor protein; sensory 99.6 7.7E-15 2.6E-19 133.3 14.3 114 123-242 4-117 (117)
273 4gyi_A RIO2 kinase; protein ki 99.6 9.4E-16 3.2E-20 168.6 9.4 136 507-655 97-265 (397)
274 3ewk_A Sensor protein; PAS dom 99.6 9.7E-15 3.3E-19 149.0 15.4 113 142-254 1-113 (227)
275 3nja_A Probable ggdef family p 99.6 6.1E-15 2.1E-19 132.4 11.9 120 127-246 4-125 (125)
276 3luq_A Sensor protein; PAS, hi 99.6 2E-14 6.8E-19 127.1 13.6 112 129-242 2-114 (114)
277 3mxq_A Sensor protein; PSI2, M 99.6 5.3E-15 1.8E-19 142.3 10.1 117 130-247 22-150 (152)
278 3kx0_X Uncharacterized protein 99.6 1.8E-14 6.1E-19 142.1 12.9 124 128-253 35-164 (185)
279 2wkq_A NPH1-1, RAS-related C3 99.6 1.8E-14 6.2E-19 155.5 13.6 117 135-251 16-135 (332)
280 1d06_A Nitrogen fixation regul 99.5 3.8E-14 1.3E-18 130.6 13.3 110 131-242 17-130 (130)
281 3vol_A Aerotaxis transducer AE 99.5 3.9E-14 1.3E-18 146.0 12.9 129 121-259 13-153 (233)
282 2v0u_A NPH1-1, LOV2; kinase, t 99.5 5.9E-14 2E-18 128.3 11.9 116 132-247 4-122 (146)
283 3ewk_A Sensor protein; PAS dom 99.5 1.5E-13 5.2E-18 140.1 14.8 111 130-240 111-227 (227)
284 3h9w_A Diguanylate cyclase wit 99.5 7.8E-14 2.7E-18 125.3 10.6 111 139-249 2-114 (115)
285 3mjq_A Uncharacterized protein 99.5 8.5E-14 2.9E-18 125.5 9.8 120 133-255 2-121 (126)
286 3olo_A Two-component sensor hi 99.5 4.9E-13 1.7E-17 119.1 14.5 107 129-242 12-118 (118)
287 3icy_A Sensor protein; sensory 99.5 1.1E-13 3.6E-18 123.5 9.5 115 128-242 2-118 (118)
288 2qkp_A Uncharacterized protein 99.5 9.9E-14 3.4E-18 133.3 9.5 122 127-251 16-140 (151)
289 3mfx_A Sensory BOX/ggdef famil 99.4 5E-13 1.7E-17 124.7 11.8 112 130-244 7-125 (129)
290 2l0w_A Potassium voltage-gated 99.4 1.1E-12 3.7E-17 118.8 13.2 113 132-244 21-138 (138)
291 3eeh_A Putative light and redo 99.4 5.4E-13 1.9E-17 118.6 11.1 114 128-242 9-125 (125)
292 1byw_A Protein (human ERG pota 99.4 1.9E-12 6.4E-17 111.9 14.0 104 141-244 2-110 (110)
293 1v9y_A Heme PAS sensor protein 99.4 5.8E-13 2E-17 126.2 11.7 123 130-254 40-166 (167)
294 2kdk_A ARYL hydrocarbon recept 99.4 5.3E-13 1.8E-17 120.4 10.7 110 135-244 8-119 (121)
295 3d72_A Vivid PAS protein VVD; 99.4 1.4E-12 4.9E-17 122.1 12.4 105 135-240 31-149 (149)
296 4hi4_A Aerotaxis transducer AE 99.4 1.9E-12 6.3E-17 118.3 11.5 105 130-244 5-121 (121)
297 3b33_A Sensor protein; structu 99.4 2.5E-12 8.5E-17 115.0 11.9 108 130-242 7-115 (115)
298 3bwl_A Sensor protein; structu 99.4 5.6E-12 1.9E-16 114.5 13.5 109 129-242 16-126 (126)
299 3fc7_A HTR-like protein, senso 99.3 1.3E-12 4.5E-17 117.8 5.7 108 128-242 17-125 (125)
300 3fg8_A Uncharacterized protein 99.3 1.5E-12 5.3E-17 118.1 5.6 107 130-244 12-118 (118)
301 4eho_A Bacteriophytochrome, PA 99.3 5E-13 1.7E-17 157.5 1.1 116 132-248 520-635 (635)
302 3tm0_A Aminoglycoside 3'-phosp 99.2 1.7E-11 6E-16 127.6 10.0 142 504-653 13-212 (263)
303 2vlg_A Sporulation kinase A; h 99.2 2.9E-11 9.9E-16 109.6 8.9 92 134-229 3-95 (111)
304 3cax_A Uncharacterized protein 99.2 2.2E-11 7.6E-16 134.1 9.7 118 127-250 236-353 (369)
305 4f3l_A Mclock, circadian locom 99.2 6.5E-11 2.2E-15 130.0 11.2 109 140-248 251-360 (361)
306 3a0r_A Sensor protein; four he 99.2 2.2E-12 7.5E-17 139.7 -0.7 144 130-287 8-152 (349)
307 1ll8_A PAS kinase; PAS domain, 99.1 1.8E-11 6.3E-16 109.6 3.1 101 139-242 7-113 (114)
308 1nwz_A PYP, photoactive yellow 99.1 1.4E-09 4.9E-14 100.0 13.7 101 133-235 20-121 (125)
309 3a0s_A Sensor protein; PAS-fol 99.1 1E-09 3.6E-14 92.1 11.7 95 139-240 1-96 (96)
310 4f3l_B BMAL1B; BHLH, PAS, circ 99.0 3.8E-10 1.3E-14 125.0 10.6 108 139-246 277-386 (387)
311 1mzu_A PPR; photoactive yellow 99.0 1.9E-09 6.5E-14 99.4 13.3 100 134-235 26-126 (129)
312 2w0n_A Sensor protein DCUS; si 99.0 5E-11 1.7E-15 105.7 1.7 105 126-242 11-118 (118)
313 3dxp_A Putative acyl-COA dehyd 99.0 5.5E-10 1.9E-14 122.1 9.5 146 507-656 40-250 (359)
314 2jhe_A Transcription regulator 99.0 2.5E-10 8.7E-15 112.3 6.1 105 129-245 79-189 (190)
315 1nd4_A Aminoglycoside 3'-phosp 99.0 4.2E-10 1.4E-14 116.2 7.3 137 504-654 19-214 (264)
316 3sg8_A APH(2'')-ID; antibiotic 98.9 2E-09 6.9E-14 114.8 7.6 185 510-705 25-287 (304)
317 3rty_A Period circadian protei 98.7 7.2E-08 2.5E-12 104.5 12.1 105 140-244 154-264 (339)
318 3r70_A Aminoglycoside phosphot 98.7 7.6E-08 2.6E-12 103.5 12.0 182 506-701 38-294 (320)
319 2ykf_A Pdtas, probable sensor 98.1 4.1E-09 1.4E-13 112.8 0.0 112 135-253 175-295 (305)
320 4dj3_A Period circadian protei 98.5 7.5E-07 2.6E-11 95.5 12.3 101 141-241 175-279 (317)
321 3gdi_A Period circadian protei 98.4 1.3E-06 4.3E-11 93.4 13.3 103 141-243 166-271 (309)
322 4dj2_A Period circadian protei 98.4 1E-06 3.5E-11 94.6 11.1 104 140-243 176-282 (320)
323 3tdw_A Gentamicin resistance p 98.3 4.3E-06 1.5E-10 89.2 14.1 75 510-591 24-102 (306)
324 3ovc_A Hygromycin-B 4-O-kinase 98.3 2.1E-06 7.3E-11 94.0 10.3 77 506-589 42-121 (362)
325 4gkh_A Aminoglycoside 3'-phosp 98.2 1.1E-05 3.7E-10 83.8 13.5 132 513-654 32-223 (272)
326 3ats_A Putative uncharacterize 98.1 3.3E-06 1.1E-10 91.7 6.6 81 507-589 22-120 (357)
327 4f3l_A Mclock, circadian locom 98.0 4.7E-05 1.6E-09 83.2 13.6 63 129-191 85-147 (361)
328 3d1u_A Putative fructosamine-3 98.0 3.6E-05 1.2E-09 81.4 11.9 78 506-589 16-97 (288)
329 2q83_A YTAA protein; 2635576, 98.0 5.9E-05 2E-09 80.7 13.7 138 510-653 37-251 (346)
330 2olc_A MTR kinase, methylthior 97.9 3E-05 1E-09 85.6 10.4 77 509-587 34-120 (397)
331 4f3l_B BMAL1B; BHLH, PAS, circ 97.8 5.9E-05 2E-09 83.2 10.6 58 129-186 85-143 (387)
332 3jr1_A Putative fructosamine-3 97.6 0.00018 6.1E-09 76.9 10.7 76 508-588 39-117 (312)
333 3rty_A Period circadian protei 97.6 0.00016 5.4E-09 78.2 9.6 97 143-243 6-140 (339)
334 2pyw_A Uncharacterized protein 97.6 0.00022 7.4E-09 79.3 11.0 76 625-701 233-312 (420)
335 2yle_A Protein spire homolog 1 97.5 0.001 3.4E-08 66.7 12.8 138 587-758 33-195 (229)
336 3dxq_A Choline/ethanolamine ki 97.2 0.0009 3.1E-08 70.6 9.5 71 510-589 23-95 (301)
337 3csv_A Aminoglycoside phosphot 97.2 0.0011 3.8E-08 70.9 10.0 140 511-657 24-220 (333)
338 3f7w_A Putative fructosamine-3 97.1 0.0015 5.1E-08 68.4 10.5 80 503-588 13-96 (288)
339 1oj5_A Steroid receptor coacti 97.1 0.00062 2.1E-08 62.3 6.3 81 146-227 13-97 (132)
340 2ppq_A HSK, HK, homoserine kin 97.1 0.0018 6E-08 68.8 10.3 144 507-654 24-217 (322)
341 1nw1_A Choline kinase (49.2 KD 96.7 0.0025 8.4E-08 71.1 8.3 71 509-587 77-157 (429)
342 4dj2_A Period circadian protei 96.6 0.00081 2.8E-08 72.0 3.3 62 124-185 15-82 (320)
343 1zyl_A Hypothetical protein YI 96.5 0.02 6.9E-07 60.7 13.1 73 511-587 32-112 (328)
344 2qg7_A Ethanolamine kinase PV0 96.4 0.0037 1.3E-07 70.3 7.1 73 509-588 112-187 (458)
345 3i1a_A Spectinomycin phosphotr 96.4 0.017 5.8E-07 62.1 11.7 32 625-656 207-238 (339)
346 3feg_A Choline/ethanolamine ki 96.3 0.0051 1.8E-07 67.4 7.1 141 506-654 52-254 (379)
347 3c5i_A Choline kinase; choline 96.3 0.0027 9.2E-08 69.0 4.7 72 510-588 38-120 (369)
348 4dj3_A Period circadian protei 96.1 0.0016 5.6E-08 69.5 2.0 52 135-186 31-83 (317)
349 3gdi_A Period circadian protei 95.8 0.0024 8.1E-08 68.0 1.6 52 134-185 19-71 (309)
350 3f2s_A CK, chetk-alpha, cholin 95.2 0.053 1.8E-06 59.7 9.6 79 505-588 53-157 (401)
351 3mes_A Choline kinase; malaria 94.1 0.16 5.6E-06 56.2 10.3 73 509-588 74-156 (424)
352 2ool_A Sensor protein; bacteri 90.5 0.36 1.2E-05 51.7 6.7 75 143-221 45-124 (337)
353 4dah_A Sporulation kinase D; a 90.2 2.3 7.9E-05 41.5 12.0 96 130-247 58-155 (217)
354 3g15_A CK, chetk-alpha, cholin 88.0 0.12 4E-06 56.8 0.7 29 626-654 246-280 (401)
355 4ann_A ESSB; membrane protein, 84.2 1.9 6.6E-05 42.8 7.1 116 560-706 43-158 (215)
356 1p0z_A Sensor kinase CITA; tra 84.0 9.2 0.00031 34.3 11.3 87 131-243 40-127 (131)
357 3cxl_A N-chimerin; SH2, RHO-GA 80.9 0.12 4E-06 58.1 -3.6 61 508-571 145-213 (463)
358 4ano_A ESSB; membrane protein, 80.5 5.8 0.0002 39.5 9.0 115 560-706 48-163 (219)
359 4ew7_A Conjugative transfer: r 78.8 14 0.00049 31.7 9.4 93 132-228 22-114 (127)
360 3lif_A Putative diguanylate cy 77.8 23 0.0008 34.9 13.0 95 130-246 58-156 (254)
361 4e04_A Bacteriophytochrome (li 77.3 5.3 0.00018 42.3 8.1 54 142-199 31-84 (327)
362 3by8_A Sensor protein DCUS; hi 76.9 12 0.00041 34.1 9.6 90 130-246 45-135 (142)
363 2w1r_A Spovt, stage V sporulat 62.1 70 0.0024 28.3 11.0 88 130-239 6-97 (123)
364 1dip_A Delta-sleep-inducing pe 61.9 23 0.00079 28.4 6.5 33 4-36 13-45 (78)
365 3ra3_B P2F; coiled coil domain 61.4 3.1 0.00011 25.9 1.2 20 14-33 1-20 (28)
366 2ykf_A Pdtas, probable sensor 65.5 1.7 5.9E-05 45.6 0.0 66 167-245 69-139 (305)
367 3c8c_A Methyl-accepting chemot 54.2 55 0.0019 31.3 9.8 53 191-245 95-148 (240)
368 1cja_A Protein (actin-fragmin 49.2 1.4E+02 0.0049 31.4 12.2 140 507-654 71-237 (342)
369 3s7o_A Bacteriophytochrome; bi 49.1 10 0.00034 40.4 3.4 40 142-181 54-94 (343)
370 2gsv_A Hypothetical protein YV 45.4 14 0.00047 29.0 2.7 26 8-33 49-74 (80)
371 3e4o_A C4-dicarboxylate transp 44.7 1.3E+02 0.0044 31.0 11.3 87 140-247 113-199 (305)
372 1deb_A APC protein, adenomatou 41.2 28 0.00095 25.7 3.6 25 6-30 3-27 (54)
373 4fpp_A Phosphotransferase; fou 41.0 5.5 0.00019 40.0 -0.1 64 213-287 3-66 (247)
374 2wq1_A General control protein 39.9 24 0.00083 23.6 2.9 23 6-28 7-29 (33)
375 3zq5_A Phytochrome-like protei 38.4 16 0.00056 41.1 3.2 42 142-183 31-73 (520)
376 3nhq_A Bacteriophytochrome; ph 36.6 30 0.001 38.8 5.0 72 142-220 28-100 (505)
377 2x6h_A GH13170P, VPS34, phosph 36.6 1.6E+02 0.0053 34.3 11.1 25 629-653 551-575 (696)
378 3lid_A Putative sensory BOX/gg 34.2 19 0.00066 37.1 2.8 104 130-246 67-179 (295)
379 3nmd_A CGMP dependent protein 31.1 38 0.0013 27.2 3.3 26 8-33 42-67 (72)
380 3vmx_A Voltage-gated hydrogen 30.7 34 0.0012 25.2 2.7 25 9-33 14-38 (48)
381 3twe_A Alpha4H; unknown functi 27.4 83 0.0028 19.4 3.5 21 7-27 2-22 (27)
382 3pxp_A Helix-turn-helix domain 26.0 47 0.0016 34.4 3.9 35 130-164 99-133 (292)
383 1kd8_A GABH AIV, GCN4 acid bas 25.9 23 0.00079 24.2 1.0 23 7-29 9-31 (36)
384 3ls8_A Phosphatidylinositol 3- 25.8 3.5E+02 0.012 30.9 11.4 25 629-653 477-501 (614)
385 3m48_A General control protein 24.7 31 0.0011 23.2 1.4 25 5-29 6-30 (33)
386 3cwf_A Alkaline phosphatase sy 23.9 2.8E+02 0.0095 23.6 8.3 78 131-243 39-116 (122)
387 3a2a_A Voltage-gated hydrogen 23.8 55 0.0019 24.6 2.8 25 9-33 21-45 (58)
388 1uo4_A General control protein 23.4 28 0.00095 23.6 1.0 24 6-29 8-31 (34)
389 2jn6_A Protein CGL2762, transp 23.4 29 0.00099 29.1 1.5 29 8-36 61-89 (97)
390 1kd8_B GABH BLL, GCN4 acid bas 22.5 71 0.0024 21.9 2.9 23 7-29 9-31 (36)
391 4g3b_A Alpha4F3D; alpha helix, 22.4 67 0.0023 19.6 2.4 19 14-32 6-24 (26)
392 3c3g_A Alpha/beta peptide with 21.9 18 0.00063 24.2 -0.1 23 6-28 7-29 (33)
393 3by9_A Sensor protein; histidi 21.6 3.4E+02 0.012 26.0 9.4 84 141-245 73-156 (260)
394 2bni_A General control protein 21.3 27 0.00093 23.6 0.6 22 6-27 8-29 (34)
395 3c3f_A Alpha/beta peptide with 20.8 20 0.00068 24.2 -0.1 23 6-28 8-30 (34)
396 3he4_B Synzip5; heterodimeric 20.1 77 0.0026 21.9 2.7 20 8-27 5-24 (46)
No 1
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.2e-55 Score=480.20 Aligned_cols=257 Identities=24% Similarity=0.420 Sum_probs=225.6
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
.++|+++++||+|+||+||+|++. ++.||||++.+........+.+.+|+++|+.++|||||++++++++++.+||||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 478999999999999999999984 788999999988777777889999999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc
Q 003978 582 EFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 660 (782)
Q Consensus 582 E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 660 (782)
|||+||+|.++|... ...+++..++.++.||+.||+|||++| ||||||||+||||+.+|.+||+|||+|+.......
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 180 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK--ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE 180 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--CEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCHHHEEECCCCCEEEcccccceeecCCcc
Confidence 999999999999754 345789999999999999999999999 99999999999999999999999999987655433
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHH
Q 003978 661 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVES 740 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~ 740 (782)
...+.+||+.|||||++.+..|+.++|||||||+||||+||+.||...+..+.+..+... ..+.++..+++++++||.+
T Consensus 181 ~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~-~~~~~~~~~s~~~~~li~~ 259 (350)
T 4b9d_A 181 LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISG-SFPPVSLHYSYDLRSLVSQ 259 (350)
T ss_dssp HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT-CCCCCCTTSCHHHHHHHHH
T ss_pred cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcC-CCCCCCccCCHHHHHHHHH
Confidence 344567999999999999999999999999999999999999999999888877776432 2345677899999999999
Q ss_pred hhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 741 CWHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 741 cL~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
||.+||++|||+.++ |+|+||+.
T Consensus 260 ~L~~dP~~R~s~~e~------l~hp~~~~ 282 (350)
T 4b9d_A 260 LFKRNPRDRPSVNSI------LEKGFIAK 282 (350)
T ss_dssp HTCSSGGGSCCHHHH------HTSHHHHT
T ss_pred HccCChhHCcCHHHH------hcCHHhhc
Confidence 999999999999999 56788864
No 2
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=7.2e-56 Score=476.53 Aligned_cols=263 Identities=22% Similarity=0.379 Sum_probs=232.5
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
.++|+++++||+|+||+||+|++ .++.||||++.+... .....+.+.+|+++|+.++|||||+++++|++++.+|||
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35799999999999999999998 477899999986543 223356789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc--
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET-- 658 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~-- 658 (782)
||||+||+|.++|.+. ..+++..+..++.||+.||+|||+++ ||||||||+||||+.+|.+||+|||+|+.....
T Consensus 111 mEy~~gG~L~~~i~~~-~~l~e~~~~~~~~qi~~al~ylH~~~--IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp ECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred EecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 9999999999999765 46999999999999999999999999 999999999999999999999999999865432
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 738 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI 738 (782)
.....+.+||+.|||||++.+..|+.++|||||||+||+|++|.+||...+....+..+. ...+.+|..+++++++||
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~--~~~~~~p~~~s~~~~dli 265 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKII--KLEYDFPEKFFPKARDLV 265 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HTCCCCCTTCCHHHHHHH
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--cCCCCCCcccCHHHHHHH
Confidence 223456789999999999999999999999999999999999999999988888877774 345677889999999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 739 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 739 ~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
.+||.+||++|||+.|++.+-.=++|+||+.+.
T Consensus 266 ~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~id 298 (311)
T 4aw0_A 266 EKLLVLDATKRLGCEEMEGYGPLKAHPFFESVT 298 (311)
T ss_dssp HHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred HHHccCCHhHCcChHHHcCCHHHHCCCCcCCCC
Confidence 999999999999999976554446799998753
No 3
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=7.4e-55 Score=475.38 Aligned_cols=257 Identities=26% Similarity=0.407 Sum_probs=227.6
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
.+.|+++++||+|+||+||+|.+ .++.||||++....... .+.+.+|+.+|+.++|||||+++++|++++.+||||
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~--~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS--GGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhH--HHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 46799999999999999999998 47789999997654322 346788999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
|||+||+|.+++... .+++..++.++.||+.||+|||++| ||||||||+||||+.+|.+||+|||+|+........
T Consensus 151 Ey~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 226 (346)
T 4fih_A 151 EFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 226 (346)
T ss_dssp CCCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC
T ss_pred eCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEECCCCCEEEecCcCceecCCCCCc
Confidence 999999999999753 5999999999999999999999999 999999999999999999999999999876655445
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-cccCCCCCCCHHHHHHHHH
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN-QRLEIPKDVDPRWAAIVES 740 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~-~~~~~p~~~~~~l~~LI~~ 740 (782)
..+.+||+.|||||++.+..|+.++|||||||+||||++|.+||...+..+.+..+.... .....+..+++++++||.+
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~ 306 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 306 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHH
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHH
Confidence 567799999999999999999999999999999999999999999988888777664322 2334445789999999999
Q ss_pred hhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 741 CWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 741 cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
||.+||++|||+.|+ |+|+||+....
T Consensus 307 ~L~~dP~~R~ta~e~------l~Hp~~~~~~~ 332 (346)
T 4fih_A 307 LLVRDPAQRATAAEL------LKHPFLAKAGP 332 (346)
T ss_dssp HSCSSTTTSCCHHHH------TTCGGGGGCCC
T ss_pred HcCCChhHCcCHHHH------hcCHhhcCCCC
Confidence 999999999999999 67899987543
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-54 Score=463.66 Aligned_cols=266 Identities=36% Similarity=0.591 Sum_probs=227.0
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
..|++..++|+++++||+|+||+||+|.+.+ .||||+++......+..+.|.+|+.+|+.++|||||++++++.. +.+
T Consensus 29 ~~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~ 106 (307)
T 3omv_A 29 YYWEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNL 106 (307)
T ss_dssp CCCBCCTTSCCEEEECCCCSSSEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSC
T ss_pred cCcEEcHHHeEEeeEEeeCCCcEEEEEEECC-cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeE
Confidence 4578888999999999999999999998765 69999998776677778899999999999999999999998764 578
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|||||||+||+|.++|.....++++..++.++.||+.||+|||+++ ||||||||+||||+.++.+||+|||+|+....
T Consensus 107 ~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~--IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 107 AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN--IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred EEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence 9999999999999999877778999999999999999999999998 99999999999999999999999999986543
Q ss_pred c--cccccCCCCCCcccCcccccC---CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-c---ccCCCC
Q 003978 658 T--YLTTKTGKGTPQWMAPEVLRN---EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN-Q---RLEIPK 728 (782)
Q Consensus 658 ~--~~~~~~~~Gt~~y~aPE~l~~---~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~-~---~~~~p~ 728 (782)
. .......+||+.|||||++.+ .+|+.++|||||||+||||+||+.||...+....+..+.... . ...++.
T Consensus 185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~ 264 (307)
T 3omv_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYK 264 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCT
T ss_pred CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccc
Confidence 2 223345689999999999964 358999999999999999999999998876654443332221 1 234567
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 729 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 729 ~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
.+++++.+||.+||+.||++|||+.++++.|+.|+|++.
T Consensus 265 ~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp 303 (307)
T 3omv_A 265 NCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp TSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred cchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence 899999999999999999999999999999999988754
No 5
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.6e-53 Score=455.39 Aligned_cols=254 Identities=31% Similarity=0.524 Sum_probs=219.0
Q ss_pred eeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec----CCceeEE
Q 003978 507 LTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS----PQRLCIV 580 (782)
Q Consensus 507 y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~----~~~~~lv 580 (782)
|++.++||+|+||.||+|.+. +..||||++..........+.+.+|+++|+.++|||||+++++|+. +..+|||
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 578889999999999999984 6679999998877777778899999999999999999999999865 3568999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc-CCCcEEEEecCCCccccccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD-KHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~-~~~~vkL~DFGla~~~~~~~ 659 (782)
||||+||+|.+++.+. ..+++..++.++.||+.||+|||+++++||||||||+||||+ .+|.+||+|||+|+.....
T Consensus 108 mEy~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~- 185 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS- 185 (290)
T ss_dssp EECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT-
T ss_pred EeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC-
Confidence 9999999999999764 469999999999999999999999877799999999999997 4799999999999865443
Q ss_pred ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhhccccccCCCCCCCHHHHHHH
Q 003978 660 LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAVGFMNQRLEIPKDVDPRWAAIV 738 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~~l~~LI 738 (782)
...+.+||+.|||||++.+ .|+.++|||||||+||||+||+.||...... .....+.....+..++..+++++++||
T Consensus 186 -~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li 263 (290)
T 3fpq_A 186 -FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEII 263 (290)
T ss_dssp -SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHH
T ss_pred -ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHH
Confidence 2345689999999999876 5999999999999999999999999876544 444444433334456677899999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 739 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 739 ~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
.+||.+||++|||+.++ |+|+||+..
T Consensus 264 ~~~L~~dP~~R~s~~e~------l~Hp~~~~~ 289 (290)
T 3fpq_A 264 EGCIRQNKDERYSIKDL------LNHAFFQEE 289 (290)
T ss_dssp HHHSCSSGGGSCCHHHH------HTSGGGC--
T ss_pred HHHccCChhHCcCHHHH------hcCccccCC
Confidence 99999999999999999 678999753
No 6
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.5e-53 Score=451.91 Aligned_cols=253 Identities=29% Similarity=0.519 Sum_probs=210.7
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCC-HHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
++|++++.||+|+||+||+|.+ .++.||||++.+.... ......+.+|+++|+.++|||||++++++++++.+||||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 6899999999999999999987 4788999999876543 344567899999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
||| +|+|.+++.+. .++++..+..++.||+.||+|||++| |+||||||+||||+.++.+||+|||+|+...... .
T Consensus 93 Ey~-~g~L~~~l~~~-~~l~e~~~~~~~~qi~~al~ylH~~~--IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~-~ 167 (275)
T 3hyh_A 93 EYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-F 167 (275)
T ss_dssp ECC-CEEHHHHHHHS-CSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCTTTEEECTTCCEEECCSSCC---------
T ss_pred eCC-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCChHHeEECCCCCEEEeecCCCeecCCCC-c
Confidence 999 67999999764 46999999999999999999999999 9999999999999999999999999998655432 2
Q ss_pred ccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHH
Q 003978 662 TKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVES 740 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~-s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~ 740 (782)
..+.+||+.|||||++.+..+ +.++|||||||++|+|+||+.||...+.......+. .....+|..+++++++||.+
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~--~~~~~~p~~~s~~~~~li~~ 245 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS--NGVYTLPKFLSPGAAGLIKR 245 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HTCCCCCTTSCHHHHHHHHH
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHHHHHHHH
Confidence 345689999999999999876 579999999999999999999999888777776663 34566788999999999999
Q ss_pred hhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 741 CWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 741 cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
||.+||++|||+.|+ ++|+|||.-
T Consensus 246 ~L~~dP~~R~s~~ei------l~hpw~k~~ 269 (275)
T 3hyh_A 246 MLIVNPLNRISIHEI------MQDDWFKVD 269 (275)
T ss_dssp HSCSSGGGSCCHHHH------HHCHHHHTT
T ss_pred HccCChhHCcCHHHH------HcCcccccC
Confidence 999999999999999 678999853
No 7
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=6.7e-54 Score=466.36 Aligned_cols=254 Identities=26% Similarity=0.319 Sum_probs=219.8
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
+....+.|++.++||+|+||.||+|+++ ++.||||+++..... .+|+.+|+.++|||||++++++.+++.+
T Consensus 53 ~~~~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~-------~~E~~il~~l~HpnIV~l~~~~~~~~~~ 125 (336)
T 4g3f_A 53 YREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-------VEELVACAGLSSPRIVPLYGAVREGPWV 125 (336)
T ss_dssp CCBTTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-------THHHHTTTTCCCTTBCCEEEEEEETTEE
T ss_pred hhcchhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH-------HHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 3344568999999999999999999984 778999999875532 3699999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC-cEEEEecCCCcccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW-TVKVGDFGLSRLKH 656 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~-~vkL~DFGla~~~~ 656 (782)
|||||||+||+|.++|...+ .+++..++.++.||+.||+|||+++ ||||||||+||||+.+| ++||+|||+|+...
T Consensus 126 ~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~ 202 (336)
T 4g3f_A 126 NIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTRR--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 202 (336)
T ss_dssp EEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCCGGGEEECTTSCCEEECCCTTCEEC-
T ss_pred EEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC--ceecccCHHHEEEeCCCCEEEEeeCCCCeEcc
Confidence 99999999999999997654 6999999999999999999999999 99999999999999987 69999999998654
Q ss_pred ccc-----ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-ccCCCCCC
Q 003978 657 ETY-----LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-RLEIPKDV 730 (782)
Q Consensus 657 ~~~-----~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~-~~~~p~~~ 730 (782)
... ......+||+.|||||++.+..|+.++|||||||+||||+||.+||...+.......+..... ...+++.+
T Consensus 203 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 282 (336)
T 4g3f_A 203 PDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSC 282 (336)
T ss_dssp -----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTS
T ss_pred CCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccC
Confidence 322 122345799999999999999999999999999999999999999988776666656543332 24578899
Q ss_pred CHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003978 731 DPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 763 (782)
Q Consensus 731 ~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~ 763 (782)
++++++||.+||.+||.+|||+.||+++|.+..
T Consensus 283 s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l 315 (336)
T 4g3f_A 283 APLTAQAIQEGLRKEPVHRASAMELRRKVGKAL 315 (336)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence 999999999999999999999999999987764
No 8
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=5.4e-53 Score=459.86 Aligned_cols=260 Identities=32% Similarity=0.562 Sum_probs=223.5
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEc-------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeee
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVWY-------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT 572 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~~-------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~ 572 (782)
..+..++|.+.++||+|+||+||+|.+. ++.||||+++.. .....+.|.+|+++|+.++|||||++++++.
T Consensus 36 ~~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~ 113 (329)
T 4aoj_A 36 HHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTMLQHQHIVRFFGVCT 113 (329)
T ss_dssp CBCCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred cccCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 3456678999999999999999999874 457999999643 4556688999999999999999999999999
Q ss_pred cCCceeEEEeecCCCCHHHHHhhcC--------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE
Q 003978 573 SPQRLCIVTEFLPRGSLFRLLQRNT--------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV 638 (782)
Q Consensus 573 ~~~~~~lv~E~~~ggsL~~~l~~~~--------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl 638 (782)
+.+.+|||||||++|+|.++|.... .++++..++.++.||+.||+|||+++ ||||||||+||||
T Consensus 114 ~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDLKp~NILl 191 (329)
T 4aoj_A 114 EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLV 191 (329)
T ss_dssp SSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEE
T ss_pred ECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC--eecccccHhhEEE
Confidence 9999999999999999999997532 35899999999999999999999998 9999999999999
Q ss_pred cCCCcEEEEecCCCcccccc--cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHH
Q 003978 639 DKHWTVKVGDFGLSRLKHET--YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIG 715 (782)
Q Consensus 639 ~~~~~vkL~DFGla~~~~~~--~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~ 715 (782)
+.++.+||+|||+|+..... .......+||+.|||||++.+..++.++|||||||+||||+| |+.||...+..+.+.
T Consensus 192 ~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~ 271 (329)
T 4aoj_A 192 GQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID 271 (329)
T ss_dssp ETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHH
T ss_pred CCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 99999999999999865432 222334579999999999999999999999999999999999 999999998888777
Q ss_pred HhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 716 AVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 716 ~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
.+.. ..++.+|..+++++.+||.+||+.||++|||+.+|+++|+.|.+
T Consensus 272 ~i~~-g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 272 CITQ-GRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp HHHH-TCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHc-CCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 6643 34677888999999999999999999999999999999988864
No 9
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=9.6e-55 Score=467.32 Aligned_cols=256 Identities=23% Similarity=0.396 Sum_probs=219.4
Q ss_pred ccceeEeeeeccCCcEEEEEEEE-----cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW-----YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~-----~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
.++|++++.||+|+||+||+|++ .++.||||++++..........+.+|+++|+.++|||||++++++++++.+|
T Consensus 23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 102 (304)
T 3ubd_A 23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY 102 (304)
T ss_dssp GGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred ccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 36899999999999999999987 3567999999765432222345778999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
||||||+||+|.+++.+.. .+++..+..++.||+.||+|||++| ||||||||+|||++.+|.+||+|||+|+.....
T Consensus 103 ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 103 LILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EEECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 9999999999999998654 6999999999999999999999999 999999999999999999999999999865554
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 738 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI 738 (782)
.....+.+||+.|||||++.+..|+.++|||||||+||||+||..||...+..+.+..+. ...+.+|..+++++++||
T Consensus 180 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~--~~~~~~p~~~s~~~~~li 257 (304)
T 3ubd_A 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL--KAKLGMPQFLSPEAQSLL 257 (304)
T ss_dssp -CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HCCCCCCTTSCHHHHHHH
T ss_pred CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHH--cCCCCCCCcCCHHHHHHH
Confidence 444556789999999999999999999999999999999999999999998888877764 345677889999999999
Q ss_pred HHhhhhCCCCCCC-----HHHHHHHHHHHHHHHhhcc
Q 003978 739 ESCWHSDPQCRPS-----FQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 739 ~~cL~~dP~~RPs-----~~ell~~L~~L~~~~~~~~ 770 (782)
.+||.+||++||| ++|+ +.|+||+.+
T Consensus 258 ~~~L~~dP~~R~ta~~~~~~ei------l~Hp~f~~i 288 (304)
T 3ubd_A 258 RMLFKRNPANRLGAGPDGVEEI------KRHSFFSTI 288 (304)
T ss_dssp HHHTCSSGGGSTTCSTTTHHHH------HTSGGGTTC
T ss_pred HHHcccCHHHCCCCCcCCHHHH------HcCccccCC
Confidence 9999999999998 4677 678999765
No 10
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3.6e-53 Score=473.15 Aligned_cols=257 Identities=26% Similarity=0.408 Sum_probs=228.4
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
.+.|+++++||+|+||.||+|.+. ++.||||++....... .+.+.+|+.+|+.++|||||+++++|.+++.+||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~--~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS--GGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhH--HHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 467999999999999999999984 7789999997654322 356789999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
|||+||+|.+++... .+++..+..++.||+.||+|||++| ||||||||+||||+.+|.|||+|||+|+........
T Consensus 228 Ey~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~~--IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 303 (423)
T 4fie_A 228 EFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 303 (423)
T ss_dssp ECCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCC
T ss_pred eCCCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHCC--eecccCCHHHEEEcCCCCEEEecCccceECCCCCcc
Confidence 999999999999753 5999999999999999999999999 999999999999999999999999999876655445
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-cccCCCCCCCHHHHHHHHH
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN-QRLEIPKDVDPRWAAIVES 740 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~-~~~~~p~~~~~~l~~LI~~ 740 (782)
..+.+||+.|||||++.+..|+.++|||||||++|||++|..||.+.+....+..+.... .....+..+++++++||.+
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~ 383 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 383 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHH
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHH
Confidence 557789999999999999999999999999999999999999999988888777664322 2344556799999999999
Q ss_pred hhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 741 CWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 741 cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
||.+||++|||+.|+ |+|+||+....
T Consensus 384 ~L~~dP~~R~ta~el------l~Hp~~~~~~~ 409 (423)
T 4fie_A 384 LLVRDPAQRATAAEL------LKHPFLAKAGP 409 (423)
T ss_dssp HSCSSTTTSCCHHHH------TTCGGGGGCCC
T ss_pred HcCCChhHCcCHHHH------hcCHHhcCCCC
Confidence 999999999999999 67899987543
No 11
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=5.2e-53 Score=453.98 Aligned_cols=260 Identities=30% Similarity=0.535 Sum_probs=227.1
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEc-------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeee
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVWY-------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT 572 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~~-------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~ 572 (782)
.++..++|.+.++||+|+||.||+|.+. +..||||+++.. .....+.|.+|+++|+.++|||||++++++.
T Consensus 8 ~~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~ 85 (299)
T 4asz_A 8 QHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCV 85 (299)
T ss_dssp CBCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred cccCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC--ChHHHHHHHHHHHHHHhCCCCCCccEEEEEe
Confidence 3556689999999999999999999864 456999998643 4556788999999999999999999999999
Q ss_pred cCCceeEEEeecCCCCHHHHHhhcC------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC
Q 003978 573 SPQRLCIVTEFLPRGSLFRLLQRNT------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK 640 (782)
Q Consensus 573 ~~~~~~lv~E~~~ggsL~~~l~~~~------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~ 640 (782)
+++.+|||||||++|+|.++|.... ..+++..++.++.||+.||+|||+++ ||||||||+||||+.
T Consensus 86 ~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDlKp~NILl~~ 163 (299)
T 4asz_A 86 EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCLVGE 163 (299)
T ss_dssp SSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECG
T ss_pred eCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCccCHhhEEECC
Confidence 9999999999999999999997542 46899999999999999999999998 999999999999999
Q ss_pred CCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHh
Q 003978 641 HWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAV 717 (782)
Q Consensus 641 ~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i 717 (782)
++.+||+|||+|+...... .......||+.|||||++.+..++.++|||||||+||||+| |+.||...+..++...+
T Consensus 164 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i 243 (299)
T 4asz_A 164 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECI 243 (299)
T ss_dssp GGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH
T ss_pred CCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 9999999999998654332 22233468999999999999999999999999999999998 99999999988887776
Q ss_pred hccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 718 GFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 718 ~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
.. ...+..|..+|+++.+||.+||+.||++|||+.++.+.|+++.+
T Consensus 244 ~~-~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 244 TQ-GRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp HH-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred Hc-CCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 43 34567888999999999999999999999999999988887653
No 12
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.1e-52 Score=449.82 Aligned_cols=257 Identities=29% Similarity=0.522 Sum_probs=225.3
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEc-------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWY-------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS 573 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~-------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~ 573 (782)
++...+++++++||+|+||+||+|.+. ++.||||+++... .....+.|.+|+.+|+.++|||||++++++..
T Consensus 22 ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~ 100 (308)
T 4gt4_A 22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTK 100 (308)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE
Confidence 456678999999999999999999863 4579999987543 33445789999999999999999999999999
Q ss_pred CCceeEEEeecCCCCHHHHHhhc---------------CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE
Q 003978 574 PQRLCIVTEFLPRGSLFRLLQRN---------------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV 638 (782)
Q Consensus 574 ~~~~~lv~E~~~ggsL~~~l~~~---------------~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl 638 (782)
++.+|||||||++|+|.++|... ...+++..++.++.||+.||+|||+++ ||||||||+||||
T Consensus 101 ~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDLK~~NILl 178 (308)
T 4gt4_A 101 DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDLATRNVLV 178 (308)
T ss_dssp SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEE
T ss_pred CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC--CCCCCccccceEE
Confidence 99999999999999999999643 235899999999999999999999998 9999999999999
Q ss_pred cCCCcEEEEecCCCcccccc--cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHH
Q 003978 639 DKHWTVKVGDFGLSRLKHET--YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIG 715 (782)
Q Consensus 639 ~~~~~vkL~DFGla~~~~~~--~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~ 715 (782)
+.++.+||+|||+|+..... .......+||+.|||||++.+..++.++|||||||+||||+| |..||.+.+..++..
T Consensus 179 ~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~ 258 (308)
T 4gt4_A 179 YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE 258 (308)
T ss_dssp CGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHH
T ss_pred CCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 99999999999999865432 223345679999999999999999999999999999999998 899999999888877
Q ss_pred HhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003978 716 AVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRD 761 (782)
Q Consensus 716 ~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~ 761 (782)
.+. ....++.|..+|+++.+||.+||..||++|||+.+|++.|++
T Consensus 259 ~i~-~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 259 MIR-NRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp HHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HHH-cCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 764 344567788999999999999999999999999999998864
No 13
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.1e-51 Score=451.05 Aligned_cols=264 Identities=30% Similarity=0.535 Sum_probs=228.5
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEcC-------CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCC-CceeEEee
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYG-------SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRH-PNVLLFMG 569 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~-------~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~H-pnIv~l~~ 569 (782)
..||+..++|+++++||+|+||.||+|.+.+ +.||||+++... .....+.+.+|+++|..+.| ||||++++
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-~~~~~~~~~~E~~il~~l~hhpnIV~l~g 135 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLG 135 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-ChHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence 4578889999999999999999999999754 359999987544 34456789999999999975 89999999
Q ss_pred eeecC-CceeEEEeecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 003978 570 AVTSP-QRLCIVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKS 633 (782)
Q Consensus 570 ~~~~~-~~~~lv~E~~~ggsL~~~l~~~~---------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp 633 (782)
+|..+ +.+|||||||++|+|.++|.... ..+++..++.++.||+.||+|||+++ ||||||||
T Consensus 136 ~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~--iiHRDLK~ 213 (353)
T 4ase_A 136 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAA 213 (353)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSG
T ss_pred EEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC--eecCccCc
Confidence 98664 56899999999999999997532 34889999999999999999999998 99999999
Q ss_pred CcEEEcCCCcEEEEecCCCcccccc--cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 003978 634 SNLLVDKHWTVKVGDFGLSRLKHET--YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNS 710 (782)
Q Consensus 634 ~NILl~~~~~vkL~DFGla~~~~~~--~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~ 710 (782)
+||||+.++.+||+|||+|+..... .......+||+.|||||++.+..|+.++|||||||+||||+| |..||...+.
T Consensus 214 ~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~ 293 (353)
T 4ase_A 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 293 (353)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred cceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999999865432 223345578999999999999999999999999999999998 9999998775
Q ss_pred HHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 711 MQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 711 ~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
...+..+.....++..|..+++++.+||.+||+.||++|||+.+|+++|.++.+
T Consensus 294 ~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 294 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp SHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 554444444556778889999999999999999999999999999999998865
No 14
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.1e-50 Score=446.10 Aligned_cols=258 Identities=21% Similarity=0.342 Sum_probs=219.6
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec------CC
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS------PQ 575 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~------~~ 575 (782)
.++|+++++||+|+||+||+|.+ .|+.||||+++.........+.+.+|+++|+.++|||||++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 46899999999999999999998 47889999998776666667888999999999999999999998753 36
Q ss_pred ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
.+|||||||+ |+|.+++... ..+++..+..++.||+.||.|||++| ||||||||+||||+.+|.+||+|||+|+..
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~-~~l~~~~~~~~~~qil~al~ylH~~~--iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSS-QPLTLEHVRYFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEEEeCCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCc--CcCCCcCccccccCCCCCEEEeecceeeec
Confidence 7899999995 6899999764 47999999999999999999999999 999999999999999999999999999865
Q ss_pred ccc----cccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc------
Q 003978 656 HET----YLTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL------ 724 (782)
Q Consensus 656 ~~~----~~~~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~------ 724 (782)
... .....+.+||+.|||||++.+. .++.++|||||||++|||++|++||.+.+....+..+......+
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~ 288 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ 288 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence 332 1223456899999999999885 46899999999999999999999999988877666653221111
Q ss_pred -----------------------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 725 -----------------------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 725 -----------------------~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
.+.+.+++++.+||.+||..||.+|||+.|+ |+|+||+...
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~------L~Hp~f~~~~ 352 (398)
T 4b99_A 289 AVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAA------LRHPFLAKYH 352 (398)
T ss_dssp -----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHH------TTSGGGTTTC
T ss_pred hhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHH------hcCHhhCcCC
Confidence 0123578999999999999999999999999 7789998754
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=4.4e-50 Score=431.49 Aligned_cols=254 Identities=24% Similarity=0.359 Sum_probs=197.9
Q ss_pred cceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC-------
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ------- 575 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------- 575 (782)
++|++++.||+|+||+||+|+++ ++.||||+++... .....+.+.+|+++|+.++|||||+++++|...+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 57999999999999999999984 7789999997654 3455678899999999999999999999987544
Q ss_pred -----ceeEEEeecCCCCHHHHHhhcCC--cchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEe
Q 003978 576 -----RLCIVTEFLPRGSLFRLLQRNTT--KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGD 648 (782)
Q Consensus 576 -----~~~lv~E~~~ggsL~~~l~~~~~--~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~D 648 (782)
.+|||||||+||+|.+++..... ..++..++.++.||+.||+|||++| ||||||||+||||+.++.+||+|
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~--IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECC
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc--CccccCcHHHeEECCCCcEEEcc
Confidence 37999999999999999976432 2445678899999999999999999 99999999999999999999999
Q ss_pred cCCCcccccccc------------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh-HHHHH
Q 003978 649 FGLSRLKHETYL------------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS-MQVIG 715 (782)
Q Consensus 649 FGla~~~~~~~~------------~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~-~~~~~ 715 (782)
||+|+....... ...+.+||+.|||||++.+..|+.++|||||||+||||++ ||..... ...+.
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~ 238 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLT 238 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHH
Confidence 999986543211 1234579999999999999999999999999999999996 7764322 12222
Q ss_pred HhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 716 AVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 716 ~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
.+.. ...+..+...++.+.+||.+||++||.+|||+.++ |+|+||+...
T Consensus 239 ~~~~-~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~ei------l~h~~~~~~~ 287 (299)
T 4g31_A 239 DVRN-LKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINI------IENAVFEDLD 287 (299)
T ss_dssp HHHT-TCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHH------HTSGGGCCC-
T ss_pred HHhc-CCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHH------hcCHhhCCCC
Confidence 2211 11111223456778999999999999999999999 5689998754
No 16
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=8.4e-49 Score=422.67 Aligned_cols=255 Identities=32% Similarity=0.498 Sum_probs=200.7
Q ss_pred cceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC----ceeEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ----RLCIV 580 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----~~~lv 580 (782)
++|.+.++||+|+||.||+|.++|+.||||+++... .....+..|+..+..++|||||++++++..++ .+|||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 579999999999999999999999999999996543 11122334666667889999999999997654 57999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcC------CCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC------NPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~------~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
||||++|+|.++|... .+++..++.++.|++.||+|||++ .++||||||||+||||+.++.+||+|||+|+.
T Consensus 80 ~Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 157 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp EECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred ecCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence 9999999999999764 589999999999999999999986 12399999999999999999999999999986
Q ss_pred cccccc----cccCCCCCCcccCcccccCC------CCCchhHHHHHHHHHHHHHcCCCCCCC----------CC-----
Q 003978 655 KHETYL----TTKTGKGTPQWMAPEVLRNE------PSDEKSDVYSFGVILWELATEKIPWDN----------LN----- 709 (782)
Q Consensus 655 ~~~~~~----~~~~~~Gt~~y~aPE~l~~~------~~s~~sDIwSLG~ll~elltG~~Pf~~----------~~----- 709 (782)
...... .....+||+.|||||++.+. .++.++|||||||+||||+||..||.. ..
T Consensus 158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~ 237 (303)
T 3hmm_A 158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237 (303)
T ss_dssp EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccch
Confidence 544322 12245799999999999865 356799999999999999999766532 11
Q ss_pred hHHHHHHhhccccccCCCCC-----CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 710 SMQVIGAVGFMNQRLEIPKD-----VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 710 ~~~~~~~i~~~~~~~~~p~~-----~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
.......+.....++.+|.. ++..+.+||.+||..||++|||+.++++.|++|.+
T Consensus 238 ~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 238 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp HHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 12222223222334444432 23578999999999999999999999999998865
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=8.5e-48 Score=424.45 Aligned_cols=253 Identities=23% Similarity=0.357 Sum_probs=206.1
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc-----CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCc
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY-----GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQR 576 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~-----~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~ 576 (782)
..++|+++++||+|+||+||+|+++ ++.||||++..... ...+.+|+++|+.+ +|||||+++++|.++++
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~----~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH----PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC----HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC----HHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 4568999999999999999999863 45699999865432 24577899999998 69999999999999999
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC-CcEEEEecCCCccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH-WTVKVGDFGLSRLK 655 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~-~~vkL~DFGla~~~ 655 (782)
+|||||||+|++|.+++. .+++..+..++.||+.||+|||++| ||||||||+||||+.+ +.+||+|||+|+..
T Consensus 95 ~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~~g--IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~ 168 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQFG--IVHRDVKPSNFLYNRRLKKYALVDFGLAQGT 168 (361)
T ss_dssp EEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHCC--eEeCcCCHHHeEEeCCCCeEEECcCCCCccc
Confidence 999999999999999984 4889999999999999999999999 9999999999999876 79999999999754
Q ss_pred ccccc----------------------------cccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCC
Q 003978 656 HETYL----------------------------TTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWD 706 (782)
Q Consensus 656 ~~~~~----------------------------~~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~ 706 (782)
..... ...+.+||+.|||||++.+. .++.++||||+||++|+|++|+.||.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~ 248 (361)
T 4f9c_A 169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248 (361)
T ss_dssp TTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred CCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence 33211 12245799999999999876 48999999999999999999999995
Q ss_pred CCC-hHHHHHHhhccc----------------------------------------------------cccCCCCCCCHH
Q 003978 707 NLN-SMQVIGAVGFMN----------------------------------------------------QRLEIPKDVDPR 733 (782)
Q Consensus 707 ~~~-~~~~~~~i~~~~----------------------------------------------------~~~~~p~~~~~~ 733 (782)
... ....+..+.... ........++++
T Consensus 249 ~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~ 328 (361)
T 4f9c_A 249 KASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDE 328 (361)
T ss_dssp CCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHH
T ss_pred CCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHH
Confidence 443 333322221100 001122457899
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 734 WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 734 l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
+++||.+||..||.+|||+.|+ |+|+||+..+
T Consensus 329 a~DLl~~lL~~dP~~R~ta~ea------L~Hp~f~~i~ 360 (361)
T 4f9c_A 329 AYDLLDKLLDLNPASRITAEEA------LLHPFFKDMS 360 (361)
T ss_dssp HHHHHHHHTCSCTTTSCCHHHH------HTSGGGTTC-
T ss_pred HHHHHHHHCcCChhHCcCHHHH------hcCcccCCCC
Confidence 9999999999999999999999 7899998764
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=8.8e-48 Score=448.37 Aligned_cols=256 Identities=23% Similarity=0.404 Sum_probs=217.7
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC----CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY----SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~----~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
+..++|+++++||+|+||.||+|++ .++.||||++.+... ..........++.+++.++|||||+++++|++++
T Consensus 186 ~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~ 265 (689)
T 3v5w_A 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD 265 (689)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS
T ss_pred CchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC
Confidence 3457899999999999999999998 477899999976432 2233334445567777889999999999999999
Q ss_pred ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
.+|||||||+||+|.++|.+. ..+++..+..++.||+.||+|||++| ||||||||+||||+.+|+|||+|||+|+..
T Consensus 266 ~lylVmEy~~GGdL~~~l~~~-~~l~E~~a~~y~~qIl~aL~yLH~~g--IiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 266 KLSFILDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEEEEECCCCSCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchHHeEEeCCCCEEecccceeeec
Confidence 999999999999999999865 46999999999999999999999999 999999999999999999999999999865
Q ss_pred ccccccccCCCCCCcccCccccc-CCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh---HHHHHHhhccccccCCCCCCC
Q 003978 656 HETYLTTKTGKGTPQWMAPEVLR-NEPSDEKSDVYSFGVILWELATEKIPWDNLNS---MQVIGAVGFMNQRLEIPKDVD 731 (782)
Q Consensus 656 ~~~~~~~~~~~Gt~~y~aPE~l~-~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~---~~~~~~i~~~~~~~~~p~~~~ 731 (782)
... ...+.+||+.|||||++. +..|+.++|||||||+||||++|.+||...+. ......+ ......+|..++
T Consensus 343 ~~~--~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i--~~~~~~~p~~~S 418 (689)
T 3v5w_A 343 SKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT--LTMAVELPDSFS 418 (689)
T ss_dssp SSC--CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHH--HHCCCCCCTTSC
T ss_pred CCC--CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh--cCCCCCCCccCC
Confidence 443 334678999999999996 56799999999999999999999999975432 2222222 344567888999
Q ss_pred HHHHHHHHHhhhhCCCCCCC-----HHHHHHHHHHHHHHHhhcc
Q 003978 732 PRWAAIVESCWHSDPQCRPS-----FQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 732 ~~l~~LI~~cL~~dP~~RPs-----~~ell~~L~~L~~~~~~~~ 770 (782)
+++++||.+||.+||.+|++ +.++ +.|+||+.+
T Consensus 419 ~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei------~~HpfF~~i 456 (689)
T 3v5w_A 419 PELRSLLEGLLQRDVNRRLGCLGRGAQEV------KESPFFRSL 456 (689)
T ss_dssp HHHHHHHHHHTCSCGGGCTTCSSSTHHHH------TTSGGGTTC
T ss_pred HHHHHHHHHHccCCHhHCCCCCCCCHHHH------hcCccccCC
Confidence 99999999999999999997 7888 678999654
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.2e-47 Score=447.85 Aligned_cols=260 Identities=22% Similarity=0.377 Sum_probs=228.5
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
..++|++++.||+|+||.||+|.+ .++.||||++.... ....+.+.+|+.+|+.++|||||+++++|+++..+|||
T Consensus 155 il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv 232 (573)
T 3uto_A 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 232 (573)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred CccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc--hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 457899999999999999999998 47789999997643 33456788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC--CcEEEEecCCCcccccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH--WTVKVGDFGLSRLKHET 658 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~--~~vkL~DFGla~~~~~~ 658 (782)
||||+||+|.++|......+++..+..++.||+.||.|||+++ |+||||||+||||+.+ +.+||+|||+|+.....
T Consensus 233 ~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~--iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~ 310 (573)
T 3uto_A 233 YEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 310 (573)
T ss_dssp EECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT
T ss_pred EeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCChhhccccCCCCCCEEEeeccceeEccCC
Confidence 9999999999999766678999999999999999999999999 9999999999999854 89999999999876543
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc--cCCCCCCCHHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR--LEIPKDVDPRWAA 736 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~--~~~p~~~~~~l~~ 736 (782)
. .....+||+.|||||++.+..|+.++|||||||+||+|++|.+||...+..+.+..+...... ...+..+++++++
T Consensus 311 ~-~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~d 389 (573)
T 3uto_A 311 Q-SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD 389 (573)
T ss_dssp S-EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHH
T ss_pred C-ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHH
Confidence 2 233558999999999999999999999999999999999999999999988888777544332 2334578999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 737 IVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 737 LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
||.+||..||.+|||+.|+ |+|+||+.....
T Consensus 390 li~~~L~~dp~~R~t~~e~------l~Hpw~~~~~~~ 420 (573)
T 3uto_A 390 FIRKLLLADPNTRMTIHQA------LEHPWLTPGNAP 420 (573)
T ss_dssp HHHTTSCSSGGGSCCHHHH------HHSTTTSCCCCT
T ss_pred HHHHHccCChhHCcCHHHH------hcCcCcCCCCCC
Confidence 9999999999999999999 678999865543
No 20
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=3.6e-46 Score=402.86 Aligned_cols=268 Identities=61% Similarity=1.043 Sum_probs=230.5
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
..+++...+|++.+.||+|+||.||+|.+.++.||||++............+.+|+++++.++||||+++++++.....+
T Consensus 30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 109 (309)
T 3p86_A 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL 109 (309)
T ss_dssp --CBCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCC
T ss_pred ccccCChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCce
Confidence 35567788999999999999999999999999999999988777777778899999999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCC--cchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTT--KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~--~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
++|||||++++|.+++..... .+++..++.++.||+.||+|||+++.+|+||||||+||||+.++.+||+|||+++..
T Consensus 110 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp EEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred EEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 999999999999999976432 389999999999999999999998767999999999999999999999999999866
Q ss_pred ccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHH
Q 003978 656 HETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWA 735 (782)
Q Consensus 656 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~ 735 (782)
...........||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+........++..+++++.
T Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 269 (309)
T 3p86_A 190 ASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVA 269 (309)
T ss_dssp ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHH
T ss_pred cccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHH
Confidence 55544445668999999999999999999999999999999999999999999888887777666677788899999999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKLRDLQRQ 765 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L~~L~~~ 765 (782)
+||.+||..||.+|||+.++++.|+.+...
T Consensus 270 ~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 270 AIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 999999999999999999999998877654
No 21
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=3.5e-45 Score=398.74 Aligned_cols=259 Identities=25% Similarity=0.441 Sum_probs=231.2
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
....++|++++.||+|+||.||+|.+ .++.||||++..........+.+.+|+++|+.++||||+++++++...+.+|
T Consensus 11 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 90 (328)
T 3fe3_A 11 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY 90 (328)
T ss_dssp CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence 34457899999999999999999997 5788999999887777777888999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
+|||||++++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 91 lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 167 (328)
T 3fe3_A 91 LIMEYASGGEVFDYLVAH-GRMKEKEARSKFRQIVSAVQYCHQKR--IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167 (328)
T ss_dssp EEECCCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS
T ss_pred EEEECCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--EeccCCCHHHEEEcCCCCEEEeeccCceecCCC
Confidence 999999999999999765 46899999999999999999999999 999999999999999999999999999765443
Q ss_pred cccccCCCCCCcccCcccccCCCCC-chhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSD-EKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 737 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s-~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~L 737 (782)
. .....+||+.|+|||++.+..++ .++|||||||++|+|++|..||...+.......+. .....+|..+++++.+|
T Consensus 168 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~--~~~~~~p~~~s~~~~~l 244 (328)
T 3fe3_A 168 G-KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL--RGKYRIPFYMSTDCENL 244 (328)
T ss_dssp C-GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HCCCCCCTTSCHHHHHH
T ss_pred C-ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH--hCCCCCCCCCCHHHHHH
Confidence 2 33456899999999999988875 79999999999999999999999988877766663 34556778899999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 738 VESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 738 I~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
|.+||..||.+|||+.++ ++|+||+...
T Consensus 245 i~~~L~~dP~~R~t~~ei------l~h~~~~~~~ 272 (328)
T 3fe3_A 245 LKRFLVLNPIKRGTLEQI------MKDRWINAGH 272 (328)
T ss_dssp HHHHCCSSTTTSCCHHHH------TTCTTTTTTC
T ss_pred HHHHCCCChhHCcCHHHH------hcCHhhcCCC
Confidence 999999999999999999 6789997654
No 22
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=6.8e-45 Score=398.04 Aligned_cols=257 Identities=25% Similarity=0.451 Sum_probs=225.5
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
..++|++++.||+|+||.||+|... ++.||||++++... .......+.+|+.+|+.++||||+++++++...+.+|+
T Consensus 3 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 82 (337)
T 1o6l_A 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF 82 (337)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred ChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEE
Confidence 4578999999999999999999984 77899999976432 12234567889999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
|||||+||+|..++... ..+++..++.++.||+.||.|||++| |+||||||+||||+.+|.+||+|||+++......
T Consensus 83 v~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 83 VMEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 99999999999999764 46899999999999999999999999 9999999999999999999999999998654444
Q ss_pred ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHH
Q 003978 660 LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVE 739 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~ 739 (782)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....+|..+++++++||.
T Consensus 160 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~--~~~~~~p~~~s~~~~~li~ 237 (337)
T 1o6l_A 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRTLSPEAKSLLA 237 (337)
T ss_dssp CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HCCCCCCTTSCHHHHHHHH
T ss_pred CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHHHHHHH
Confidence 44556789999999999999999999999999999999999999999888777666653 3455678889999999999
Q ss_pred HhhhhCCCCCC-----CHHHHHHHHHHHHHHHhhcc
Q 003978 740 SCWHSDPQCRP-----SFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 740 ~cL~~dP~~RP-----s~~ell~~L~~L~~~~~~~~ 770 (782)
+||..||.+|| ++.++ +.|+||+.+
T Consensus 238 ~lL~~dP~~R~g~~~~~~~ei------~~h~~f~~~ 267 (337)
T 1o6l_A 238 GLLKKDPKQRLGGGPSDAKEV------MEHRFFLSI 267 (337)
T ss_dssp HHTCSSTTTSTTCSTTTHHHH------HTSGGGTTC
T ss_pred HHhhcCHHHhcCCCCCCHHHH------HcCCCcCCC
Confidence 99999999999 89999 667888543
No 23
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3e-44 Score=397.82 Aligned_cols=263 Identities=29% Similarity=0.576 Sum_probs=228.1
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEcC---------CeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEe
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYG---------SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFM 568 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~---------~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~ 568 (782)
.++...++|++++.||+|+||.||+|.+.+ ..||||+++... .......+.+|+.+|+.+ +|||||+++
T Consensus 75 ~~~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpnIv~~~ 153 (370)
T 2psq_A 75 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLL 153 (370)
T ss_dssp TTBCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC-BHHHHHHHHHHHHHHHHSCCCTTBCCEE
T ss_pred cccccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc-CHHHHHHHHHHHHHHHHhcCCCCEeeEE
Confidence 345667899999999999999999998732 359999987543 455667899999999999 899999999
Q ss_pred eeeecCCceeEEEeecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 003978 569 GAVTSPQRLCIVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKS 633 (782)
Q Consensus 569 ~~~~~~~~~~lv~E~~~ggsL~~~l~~~~---------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp 633 (782)
+++...+.+|+||||+++|+|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||
T Consensus 154 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp 231 (370)
T 2psq_A 154 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAA 231 (370)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCG
T ss_pred EEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--eeccccch
Confidence 99999999999999999999999997643 24789999999999999999999999 99999999
Q ss_pred CcEEEcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 003978 634 SNLLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNS 710 (782)
Q Consensus 634 ~NILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~ 710 (782)
+||||+.++.+||+|||+++...... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 232 ~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~ 311 (370)
T 2psq_A 232 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 311 (370)
T ss_dssp GGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred hhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 99999999999999999998554322 22334567899999999999999999999999999999999 9999998877
Q ss_pred HHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003978 711 MQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 765 (782)
Q Consensus 711 ~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~ 765 (782)
......+. .......+..++.++.+||.+||..||.+||++.++++.|+++...
T Consensus 312 ~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 312 EELFKLLK-EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp GGHHHHHH-TTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 76665543 3345667788999999999999999999999999999999998754
No 24
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-44 Score=397.65 Aligned_cols=260 Identities=26% Similarity=0.460 Sum_probs=220.4
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 576 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 576 (782)
.++...++|++.+.||+|+||.||+|.+ .++.||||++....... ....+.+|+++|+.++||||+++++++...+.
T Consensus 4 ~~~~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~-~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~ 82 (347)
T 3zgw_A 4 DYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS-DLPRIKTEIEALKNLRHQHICQLYHVLETANK 82 (347)
T ss_dssp CSTTTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred cHHHHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccch-HHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCE
Confidence 4556778999999999999999999997 57889999997765432 34568899999999999999999999999999
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
+|+|||||++++|.+++.... .+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++....
T Consensus 83 ~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 159 (347)
T 3zgw_A 83 IFMVLEYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVHSQG--YAHRDLKPENLLFDEYHKLKLIDFGLCAKPK 159 (347)
T ss_dssp EEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBC--
T ss_pred EEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCccHHHEEEcCCCCEEEEeccCccccc
Confidence 999999999999999997644 6999999999999999999999999 9999999999999999999999999987544
Q ss_pred ccc-ccccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHH
Q 003978 657 ETY-LTTKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 734 (782)
Q Consensus 657 ~~~-~~~~~~~Gt~~y~aPE~l~~~~~-s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l 734 (782)
... ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...+.......+. .....+|..+++++
T Consensus 160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~--~~~~~~p~~~s~~~ 237 (347)
T 3zgw_A 160 GNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIM--RGKYDVPKWLSPSS 237 (347)
T ss_dssp ------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HTCCCCCTTCCHHH
T ss_pred CCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHH
Confidence 322 22345679999999999998876 889999999999999999999999988877766663 34566788899999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 735 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 735 ~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
.+||.+||..||.+|||+.++ +.|+||+..
T Consensus 238 ~~li~~~L~~dP~~Rps~~ei------l~hp~~~~~ 267 (347)
T 3zgw_A 238 ILLLQQMLQVDPKKRISMKNL------LNHPWIMQD 267 (347)
T ss_dssp HHHHHHHTCSSGGGSCCHHHH------HTCHHHHTT
T ss_pred HHHHHHHcccCHhHCcCHHHH------hcCcchhcC
Confidence 999999999999999999999 678999764
No 25
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.5e-44 Score=387.66 Aligned_cols=259 Identities=27% Similarity=0.452 Sum_probs=226.4
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
...++|++.++||+|+||.||+|.+ .++.||||++....... .+.+.+|+.+++.++||||+++++++...+.+|+
T Consensus 17 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 94 (297)
T 3fxz_A 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPNIVNYLDSYLVGDELWV 94 (297)
T ss_dssp CGGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSC--HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred ChhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccH--HHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEE
Confidence 3457899999999999999999986 57789999997654332 3567889999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
|||||.+++|.+++... .+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++.......
T Consensus 95 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (297)
T 3fxz_A 95 VMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (297)
T ss_dssp EEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EEECCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCC--ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence 99999999999999764 5899999999999999999999999 9999999999999999999999999998766554
Q ss_pred ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc-ccccCCCCCCCHHHHHHH
Q 003978 660 LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM-NQRLEIPKDVDPRWAAIV 738 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~-~~~~~~p~~~~~~l~~LI 738 (782)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+... ......+..+++.+.+||
T Consensus 171 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 250 (297)
T 3fxz_A 171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFL 250 (297)
T ss_dssp CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHH
T ss_pred cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHH
Confidence 4555668999999999999999999999999999999999999999988776655554322 223445677999999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 739 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 739 ~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
.+||..||.+|||+.++ ++|+||+....
T Consensus 251 ~~~l~~dp~~Rps~~el------l~h~~~~~~~~ 278 (297)
T 3fxz_A 251 NRCLEMDVEKRGSAKEL------LQHQFLKIAKP 278 (297)
T ss_dssp HHHSCSSTTTSCCHHHH------TTCGGGGGCCC
T ss_pred HHHccCChhHCcCHHHH------hhChhhcccCc
Confidence 99999999999999999 67899987654
No 26
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2.4e-44 Score=388.56 Aligned_cols=263 Identities=26% Similarity=0.360 Sum_probs=219.8
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE-cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW-YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~-~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
+.+.++|+++++||+|+||.||+|.+ .++.||||++............+.+|+++++.++||||+++++++..+..+|+
T Consensus 17 q~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 96 (311)
T 3niz_A 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTL 96 (311)
T ss_dssp ECSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEE
T ss_pred cchHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEE
Confidence 45668999999999999999999998 57789999997665545556778899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
|||||++ +|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++......
T Consensus 97 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 173 (311)
T 3niz_A 97 VFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR--ILHRDLKPQNLLINSDGALKLADFGLARAFGIPV 173 (311)
T ss_dssp EEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEETTSCC
T ss_pred EEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCchHhEEECCCCCEEEccCcCceecCCCc
Confidence 9999964 899999877777999999999999999999999999 9999999999999999999999999998765544
Q ss_pred ccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc---------------
Q 003978 660 LTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR--------------- 723 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~--------------- 723 (782)
.......||+.|+|||++.+ ..++.++|||||||++|+|++|..||...........+......
T Consensus 174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 253 (311)
T 3niz_A 174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253 (311)
T ss_dssp C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchh
Confidence 44455678999999999987 56799999999999999999999999877665544443211110
Q ss_pred -------------cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 724 -------------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 724 -------------~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
..+.+.+++++.+||.+||..||.+|||+.++ |+|+||+....
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el------l~hp~f~~~~~ 309 (311)
T 3niz_A 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDA------MNHPYFKDLDP 309 (311)
T ss_dssp HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHH------HTSGGGTTSCT
T ss_pred hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHH------hcCcccccCCc
Confidence 01224578899999999999999999999999 67899997654
No 27
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=5.2e-45 Score=401.47 Aligned_cols=258 Identities=27% Similarity=0.415 Sum_probs=220.5
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCce
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 577 (782)
...++|+++++||+|+||.||+|.+. ++.||||++++... .......+.+|+.+++.+ +||||+++++++...+.+
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 44578999999999999999999984 67899999976432 223346678899999988 699999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|+|||||+|++|..++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++....
T Consensus 100 ~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKS-RRFDEARARFYAAEIISALMFLHDKG--IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 9999999999999999765 46999999999999999999999999 99999999999999999999999999986544
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHH
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 737 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~L 737 (782)
........+||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....+|..+++++.+|
T Consensus 177 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~--~~~~~~p~~~~~~~~~l 254 (353)
T 3txo_A 177 NGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL--NDEVVYPTWLHEDATGI 254 (353)
T ss_dssp ---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HCCCCCCTTSCHHHHHH
T ss_pred CCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCHHHHHH
Confidence 4445556789999999999999999999999999999999999999999988888777763 34566788899999999
Q ss_pred HHHhhhhCCCCCCCH------HHHHHHHHHHHHHHhhcc
Q 003978 738 VESCWHSDPQCRPSF------QELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 738 I~~cL~~dP~~RPs~------~ell~~L~~L~~~~~~~~ 770 (782)
|.+||.+||.+||++ .++ ++|+||+..
T Consensus 255 i~~lL~~dP~~R~~~~~~~~~~~i------l~hp~f~~~ 287 (353)
T 3txo_A 255 LKSFMTKNPTMRLGSLTQGGEHAI------LRHPFFKEI 287 (353)
T ss_dssp HHHHTCSSGGGSTTSGGGTCTHHH------HTSGGGTTC
T ss_pred HHHHhhhCHHHccCCcccCCHHHH------hhCCcccCC
Confidence 999999999999998 777 678999754
No 28
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=5e-44 Score=375.52 Aligned_cols=259 Identities=30% Similarity=0.601 Sum_probs=231.1
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC--Ccee
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP--QRLC 578 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~~ 578 (782)
++..++|++.+.||+|+||.||+|.+.++.||||++..........+.+.+|+.+++.++||||+++++++... ..++
T Consensus 6 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (271)
T 3kmu_A 6 GIDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPT 85 (271)
T ss_dssp CCCGGGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCE
T ss_pred CCCHHHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeE
Confidence 45668999999999999999999999999999999988777777778899999999999999999999999877 7889
Q ss_pred EEEeecCCCCHHHHHhhcCC-cchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTT-KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~-~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
+||||+++++|.+++..... .+++..++.++.||+.||.|||+++..|+|+||||+|||++.++.++|+|||++.....
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~ 165 (271)
T 3kmu_A 86 LITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS 165 (271)
T ss_dssp EEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred eeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence 99999999999999976543 58999999999999999999999877799999999999999999999999998754322
Q ss_pred ccccccCCCCCCcccCcccccCCCCCc---hhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHH
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNEPSDE---KSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 734 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~~~s~---~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l 734 (782)
....||+.|+|||++.+..++. ++|||||||++|+|++|..||...........+......+.++..+++++
T Consensus 166 -----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (271)
T 3kmu_A 166 -----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHV 240 (271)
T ss_dssp -----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHHH
T ss_pred -----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHHH
Confidence 2456899999999998866544 89999999999999999999999888877766665666777888999999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 735 AAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 735 ~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
.+||.+||..||.+|||+.++++.|+++++
T Consensus 241 ~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 241 SKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 999999999999999999999999998753
No 29
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=7.7e-44 Score=397.78 Aligned_cols=258 Identities=26% Similarity=0.428 Sum_probs=220.2
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCC-HHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCce
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~-~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 577 (782)
...++|+++++||+|+||.||+|++. ++.||||++++.... ......+..|..+|..+ +|||||++++++.....+
T Consensus 49 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 128 (396)
T 4dc2_A 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL 128 (396)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEE
Confidence 44578999999999999999999984 567999999876543 33445677899999887 899999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|+|||||+||+|..++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.+|.+||+|||+++....
T Consensus 129 ~lV~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 129 FFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEEcCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--EEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 9999999999999999764 46999999999999999999999999 99999999999999999999999999986444
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC---------hHHHHHHhhccccccCCCC
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN---------SMQVIGAVGFMNQRLEIPK 728 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~---------~~~~~~~i~~~~~~~~~p~ 728 (782)
........+||+.|+|||++.+..++.++|||||||++|+|++|..||.... .......+ ......+|.
T Consensus 206 ~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i--~~~~~~~p~ 283 (396)
T 4dc2_A 206 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI--LEKQIRIPR 283 (396)
T ss_dssp TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHH--HHCCCCCCT
T ss_pred CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHH--hccccCCCC
Confidence 4445567789999999999999999999999999999999999999996432 11122222 344567888
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCH------HHHHHHHHHHHHHHhhcc
Q 003978 729 DVDPRWAAIVESCWHSDPQCRPSF------QELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 729 ~~~~~l~~LI~~cL~~dP~~RPs~------~ell~~L~~L~~~~~~~~ 770 (782)
.+++++++||.+||..||.+||++ .++ +.|+||+..
T Consensus 284 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei------~~Hpff~~i 325 (396)
T 4dc2_A 284 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADI------QGHPFFRNV 325 (396)
T ss_dssp TSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHH------HHSTTTTTC
T ss_pred cCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHH------hcCccccCC
Confidence 999999999999999999999985 566 678999654
No 30
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1e-43 Score=386.60 Aligned_cols=258 Identities=23% Similarity=0.363 Sum_probs=214.5
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE-----cCCeEEEEEEeccCCC--HHHHHHHHHHHHHHHhCCCCceeEEeeeeecC
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW-----YGSDVAVKVFSRQEYS--DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP 574 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~-----~~~~vAiK~~~~~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~ 574 (782)
+..++|++++.||+|+||.||++.. .++.||||++++.... ......+.+|+.+|+.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 93 (327)
T 3a62_A 14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTG 93 (327)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECS
T ss_pred CCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcC
Confidence 4457899999999999999999987 4678999999765432 23445678899999999999999999999999
Q ss_pred CceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 575 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 575 ~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
+.+|+|||||++++|.+++.... .+++..++.++.||+.||.|||++| |+||||||+||||+.++.+||+|||+++.
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~~--ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 94 GKLYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLHQKG--IIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp SCEEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred CEEEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCC--EEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 99999999999999999997643 6889999999999999999999999 99999999999999999999999999976
Q ss_pred cccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHH
Q 003978 655 KHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 734 (782)
Q Consensus 655 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l 734 (782)
............||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....+|..+++++
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~--~~~~~~p~~~~~~~ 248 (327)
T 3a62_A 171 SIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKIL--KCKLNLPPYLTQEA 248 (327)
T ss_dssp --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH--HTCCCCCTTSCHHH
T ss_pred cccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHH--hCCCCCCCCCCHHH
Confidence 4443333445679999999999999999999999999999999999999999888777666653 33456778899999
Q ss_pred HHHHHHhhhhCCCCCC-----CHHHHHHHHHHHHHHHhhcc
Q 003978 735 AAIVESCWHSDPQCRP-----SFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 735 ~~LI~~cL~~dP~~RP-----s~~ell~~L~~L~~~~~~~~ 770 (782)
.+||.+||..||.+|| ++.++ +.|+||+..
T Consensus 249 ~~li~~~L~~dp~~R~~~~~~~~~e~------l~hp~f~~~ 283 (327)
T 3a62_A 249 RDLLKKLLKRNAASRLGAGPGDAGEV------QAHPFFRHI 283 (327)
T ss_dssp HHHHHHHSCSCGGGSTTSSTTTHHHH------HHSGGGSSC
T ss_pred HHHHHHHHhcCHhhccCCCCCCHHHH------HcCCcccCC
Confidence 9999999999999999 78888 678999654
No 31
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.5e-43 Score=388.48 Aligned_cols=257 Identities=26% Similarity=0.426 Sum_probs=221.5
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCcee
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~ 578 (782)
..++|++++.||+|+||.||+|.++ ++.||||++++... .......+.+|+.+++.+ +|||||++++++.....+|
T Consensus 7 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 86 (345)
T 3a8x_A 7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 86 (345)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEE
Confidence 4578999999999999999999985 67799999987654 445667788999999988 8999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
+|||||+|++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++.....
T Consensus 87 lv~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 87 FVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp EEECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 999999999999999764 36899999999999999999999999 999999999999999999999999999864444
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCC---------ChHHHHHHhhccccccCCCCC
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNL---------NSMQVIGAVGFMNQRLEIPKD 729 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~---------~~~~~~~~i~~~~~~~~~p~~ 729 (782)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||... ........+ ......+|..
T Consensus 164 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i--~~~~~~~p~~ 241 (345)
T 3a8x_A 164 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI--LEKQIRIPRS 241 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHH--HHCCCCCCTT
T ss_pred CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHH--HcCCCCCCCC
Confidence 44455678999999999999999999999999999999999999999652 112222222 2345667888
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCH------HHHHHHHHHHHHHHhhcc
Q 003978 730 VDPRWAAIVESCWHSDPQCRPSF------QELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 730 ~~~~l~~LI~~cL~~dP~~RPs~------~ell~~L~~L~~~~~~~~ 770 (782)
++.++++||.+||..||.+||++ .++ +.|+||+..
T Consensus 242 ~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i------~~hp~f~~~ 282 (345)
T 3a8x_A 242 LSVKAASVLKSFLNKDPKERLGCHPQTGFADI------QGHPFFRNV 282 (345)
T ss_dssp SCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHH------HTSGGGTTC
T ss_pred CCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHH------hcCCccCCC
Confidence 99999999999999999999985 566 678999643
No 32
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.1e-43 Score=383.83 Aligned_cols=263 Identities=32% Similarity=0.514 Sum_probs=227.6
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEc-----CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWY-----GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS 573 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~-----~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~ 573 (782)
..++..++|++.+.||+|+||.||+|.+. +..||||+++... .....+.+.+|+.+++.++||||+++++++..
T Consensus 43 ~~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 121 (325)
T 3kul_A 43 TREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVTR 121 (325)
T ss_dssp CCBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG
T ss_pred ccccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 34566789999999999999999999983 3349999997543 45566789999999999999999999999999
Q ss_pred CCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCc
Q 003978 574 PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 653 (782)
Q Consensus 574 ~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~ 653 (782)
.+.+|+|||||++++|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 122 GRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG--YVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp GGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred CCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCcceEEECCCCCEEECCCCccc
Confidence 99999999999999999999877678999999999999999999999999 9999999999999999999999999998
Q ss_pred ccccccc---cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCC
Q 003978 654 LKHETYL---TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKD 729 (782)
Q Consensus 654 ~~~~~~~---~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~ 729 (782)
....... ......+|+.|+|||++.+..++.++|||||||++|+|++ |..||...........+.. ......+..
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~ 278 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEE-GYRLPAPMG 278 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHT-TCCCCCCTT
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc-CCCCCCCCC
Confidence 6544321 2223456889999999999999999999999999999999 9999999888877766643 345567778
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003978 730 VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 765 (782)
Q Consensus 730 ~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~ 765 (782)
+++.+.+||.+||..||.+|||+.++++.|+++...
T Consensus 279 ~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 279 CPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999988653
No 33
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.5e-43 Score=371.34 Aligned_cols=260 Identities=30% Similarity=0.574 Sum_probs=229.1
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEE-cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVW-YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~-~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
.|.+..++|++.+.||+|+||.||++.+ .+..||+|++....... +.+.+|+++++.++||||+++++++.....+
T Consensus 4 ~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (269)
T 4hcu_A 4 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI 80 (269)
T ss_dssp -CBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCH---HHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred cEEeChhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCH---HHHHHHHHHHHhCCCCCEeeEEEEEecCCce
Confidence 4566778999999999999999999998 56679999998765544 4678899999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|+||||+++++|.+++......+++..++.++.|++.||.|||+++ |+|+||||+||+++.++.+||+|||++.....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 158 (269)
T 4hcu_A 81 CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 158 (269)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred EEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCC--eecCCcchheEEEcCCCCEEeccccccccccc
Confidence 9999999999999999877777999999999999999999999999 99999999999999999999999999976544
Q ss_pred cc-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHH
Q 003978 658 TY-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWA 735 (782)
Q Consensus 658 ~~-~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~ 735 (782)
.. .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||...........+.. ......+..+++.+.
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 237 (269)
T 4hcu_A 159 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST-GFRLYKPRLASTHVY 237 (269)
T ss_dssp HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-TCCCCCCTTSCHHHH
T ss_pred cccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhc-CccCCCCCcCCHHHH
Confidence 32 22334467889999999999999999999999999999999 9999999888777666643 334556777899999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
+||.+||..||.+||++.+++++|+++..
T Consensus 238 ~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 238 QIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999998864
No 34
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.5e-43 Score=377.85 Aligned_cols=258 Identities=24% Similarity=0.337 Sum_probs=218.5
Q ss_pred cceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
++|+++++||+|+||.||+|.+ .++.||||++............+.+|+.+++.++||||+++++++..++.+|+|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 6899999999999999999998 46789999998776666666788899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
||++ +|.+++......+++..++.++.||+.||.|||++| |+||||||+||||+.++.+||+|||+++.........
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~--ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN--VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCC
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEeecccceecCCccccc
Confidence 9965 777777666677999999999999999999999999 9999999999999999999999999998765554445
Q ss_pred cCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCC-CCCCChHHHHHHhhcccc------------------
Q 003978 663 KTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIP-WDNLNSMQVIGAVGFMNQ------------------ 722 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~~~-~s~~sDIwSLG~ll~elltG~~P-f~~~~~~~~~~~i~~~~~------------------ 722 (782)
....||+.|+|||++.+.. ++.++|||||||++|+|++|..| |...+.......+.....
T Consensus 159 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 238 (292)
T 3o0g_A 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238 (292)
T ss_dssp CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccc
Confidence 5668899999999998766 79999999999999999998777 455554444444321110
Q ss_pred ---------ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 723 ---------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 723 ---------~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
.....+.+++++++||.+||..||++|||+.++ ++|+||+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~------l~hp~f~~~~ 290 (292)
T 3o0g_A 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA------LQHPYFSDFC 290 (292)
T ss_dssp CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHH------HTSGGGTTC-
T ss_pred cccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHH------hcCcccccCC
Confidence 011224578999999999999999999999999 6789998643
No 35
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.5e-43 Score=401.40 Aligned_cols=259 Identities=22% Similarity=0.333 Sum_probs=225.3
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
...++|+++++||+|+||.||+|.+ .++.||+|++..........+.+.+|+.+++.++|||||++++++...+.+|+
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 3457899999999999999999987 57789999998877666667789999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc---CCCcEEEEecCCCcccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD---KHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~---~~~~vkL~DFGla~~~~ 656 (782)
|||||.|++|.+++... ..+++..+..++.||+.||.|||++| |+||||||+||||+ .++.+||+|||++....
T Consensus 88 v~E~~~gg~L~~~i~~~-~~~~e~~~~~i~~qil~aL~~lH~~g--ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 88 IFDLVTGGELFEDIVAR-EYYSEADASHCIQQILEAVLHCHQMG--VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp EECCCBCCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EEEeCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 99999999999999765 46999999999999999999999999 99999999999998 46789999999998765
Q ss_pred cccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCC--CCCCCHHH
Q 003978 657 ETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEI--PKDVDPRW 734 (782)
Q Consensus 657 ~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~--p~~~~~~l 734 (782)
..........||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+......... ...+++++
T Consensus 165 ~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 244 (444)
T 3soa_A 165 GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA 244 (444)
T ss_dssp TTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHH
T ss_pred CCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHH
Confidence 5444445668999999999999999999999999999999999999999998887777776543333222 24689999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 735 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 735 ~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
++||.+||..||.+|||+.++ |+|+||+.
T Consensus 245 ~~li~~~L~~dP~~Rpta~e~------L~hp~~~~ 273 (444)
T 3soa_A 245 KDLINKMLTINPSKRITAAEA------LKHPWISH 273 (444)
T ss_dssp HHHHHHHSCSSTTTSCCHHHH------HHSCTTHH
T ss_pred HHHHHHHcCCChhHCCCHHHH------hcCccccC
Confidence 999999999999999999999 55677754
No 36
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=8.9e-44 Score=385.99 Aligned_cols=253 Identities=25% Similarity=0.445 Sum_probs=223.0
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCC-HHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
..++|++++.||+|+||.||+|.. .++.||||++++.... ......+.+|+.+++.++||||+++++++.+...+|+
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 83 (318)
T 1fot_A 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM 83 (318)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred ChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEE
Confidence 357899999999999999999998 4778999999764321 1234567789999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
|||||+|++|.+++... ..+++..++.++.||+.||.|||++| |+||||||+||||+.+|.+||+|||+++.....
T Consensus 84 v~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 84 IMDYIEGGELFSLLRKS-QRFPNPVAKFYAAEVCLALEYLHSKD--IIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp EECCCCSCBHHHHHHHT-SSCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred EEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 99999999999999764 46899999999999999999999999 999999999999999999999999999865432
Q ss_pred ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHH
Q 003978 660 LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVE 739 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~ 739 (782)
....+||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....+|..+++++.+||.
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~--~~~~~~p~~~~~~~~~li~ 235 (318)
T 1fot_A 160 --TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKIL--NAELRFPPFFNEDVKDLLS 235 (318)
T ss_dssp --BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH--HCCCCCCTTSCHHHHHHHH
T ss_pred --cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH--hCCCCCCCCCCHHHHHHHH
Confidence 335689999999999999999999999999999999999999999888777766663 3345678889999999999
Q ss_pred HhhhhCCCCCC-----CHHHHHHHHHHHHHHHhhc
Q 003978 740 SCWHSDPQCRP-----SFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 740 ~cL~~dP~~RP-----s~~ell~~L~~L~~~~~~~ 769 (782)
+||..||.+|| ++.++ +.|+||+.
T Consensus 236 ~lL~~dp~~R~~~~~~~~~~i------~~hp~f~~ 264 (318)
T 1fot_A 236 RLITRDLSQRLGNLQNGTEDV------KNHPWFKE 264 (318)
T ss_dssp HHTCSCTTTCTTSSTTTTHHH------HTSGGGSS
T ss_pred HHhccCHHHcCCCcCCCHHHH------hcCccccC
Confidence 99999999999 89999 67899864
No 37
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.8e-43 Score=381.17 Aligned_cols=265 Identities=36% Similarity=0.606 Sum_probs=223.2
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
..|++..++|++.++||+|+||.||+|.+.+ .+|+|+++.........+.+.+|+.+++.++||||+++++++. .+.+
T Consensus 29 ~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~ 106 (307)
T 3lb7_A 29 YYWEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNL 106 (307)
T ss_dssp CCCBCCTTSCCEEEEEEECSSCEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSC
T ss_pred ceEEecccceEEEeEecCCCCeEEEEEEECC-EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcE
Confidence 4567778899999999999999999998755 5999999877667777889999999999999999999999875 4568
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
++|||||.+++|.+++......+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+++....
T Consensus 107 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~ 184 (307)
T 3lb7_A 107 AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN--IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred EEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--EeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence 9999999999999999877778999999999999999999999999 99999999999999999999999999975432
Q ss_pred --ccccccCCCCCCcccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhh-cccc---ccCCCC
Q 003978 658 --TYLTTKTGKGTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVG-FMNQ---RLEIPK 728 (782)
Q Consensus 658 --~~~~~~~~~Gt~~y~aPE~l~---~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~-~~~~---~~~~p~ 728 (782)
.........||+.|+|||++. +..++.++|||||||++|+|++|..||...........+. .... ...++.
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (307)
T 3lb7_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYK 264 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTTSCS
T ss_pred ccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhhhhc
Confidence 122233457999999999986 6678899999999999999999999998776554433322 1111 223446
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 729 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 729 ~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
.+++.+.+||.+||..||.+||++.++++.|+.+++.+
T Consensus 265 ~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 265 NCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp SSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred CCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 78999999999999999999999999999999988754
No 38
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=4.6e-44 Score=381.30 Aligned_cols=257 Identities=25% Similarity=0.367 Sum_probs=214.0
Q ss_pred cceeEeeeeccCCcEEEEEEEEc-CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY-GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~-~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
++|++++.||+|+||.||+|.+. ++.||||++............+.+|+.+++.++||||+++++++...+.+|+||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 68999999999999999999984 77899999976544333346678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccccc
Q 003978 584 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTK 663 (782)
Q Consensus 584 ~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 663 (782)
+++ +|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++..........
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR--VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT 158 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCCEEEeECccccccCccccccc
Confidence 965 999999876677999999999999999999999998 99999999999999999999999999976554333334
Q ss_pred CCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc-------------------
Q 003978 664 TGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR------------------- 723 (782)
Q Consensus 664 ~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~------------------- 723 (782)
...||+.|+|||++.+. .++.++|||||||++|+|++|..||...........+......
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T 1ob3_A 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (288)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred cccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccccc
Confidence 55789999999999764 5799999999999999999999999988776655444211000
Q ss_pred --------cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 724 --------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 724 --------~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
..+...+++++.+||.+||..||.+|||+.++ +.|+||+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~------l~hp~f~~~ 287 (288)
T 1ob3_A 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA------LEHAYFKEN 287 (288)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHH------HTSGGGGC-
T ss_pred ccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHH------hcCcchhhc
Confidence 01224578999999999999999999999999 678999864
No 39
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.6e-44 Score=394.69 Aligned_cols=258 Identities=25% Similarity=0.426 Sum_probs=223.3
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCce
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 577 (782)
...++|++.+.||+|+||.||+|.++ ++.||||++++... .......+..|..++..+ +||||+++++++.....+
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 45579999999999999999999984 67799999976432 112245677899999877 899999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|+|||||+||+|.+++... ..+++..++.++.||+.||.|||++| |+||||||+||||+.+|.+||+|||+++....
T Consensus 94 ~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLHSKG--IVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 9999999999999999764 36899999999999999999999999 99999999999999999999999999986543
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHH
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 737 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~L 737 (782)
........+||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+.. ....+|..+++++++|
T Consensus 171 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~--~~~~~p~~~s~~~~~l 248 (345)
T 1xjd_A 171 GDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM--DNPFYPRWLEKEAKDL 248 (345)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CCCCCCTTSCHHHHHH
T ss_pred CCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHh--CCCCCCcccCHHHHHH
Confidence 33344567899999999999999999999999999999999999999998888777766643 3456778899999999
Q ss_pred HHHhhhhCCCCCCCHH-HHHHHHHHHHHHHhhcc
Q 003978 738 VESCWHSDPQCRPSFQ-ELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 738 I~~cL~~dP~~RPs~~-ell~~L~~L~~~~~~~~ 770 (782)
|.+||..||.+||++. ++ ++|+||+..
T Consensus 249 i~~lL~~dp~~R~~~~~~i------~~hp~f~~~ 276 (345)
T 1xjd_A 249 LVKLFVREPEKRLGVRGDI------RQHPLFREI 276 (345)
T ss_dssp HHHHSCSSGGGSBTTBSCG------GGSGGGTTC
T ss_pred HHHHhcCCHhHcCCChHHH------HcCccccCC
Confidence 9999999999999997 77 567888654
No 40
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=9.6e-44 Score=380.48 Aligned_cols=256 Identities=26% Similarity=0.413 Sum_probs=213.6
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCH------------------------HHHHHHHHHHHHH
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSD------------------------EVIHSFRQEVSLM 556 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~------------------------~~~~~~~~Ei~il 556 (782)
..++|++.+.||+|+||.||+|.+ .++.||||++....... ...+.+.+|+++|
T Consensus 11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 90 (298)
T 2zv2_A 11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL 90 (298)
T ss_dssp EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence 347899999999999999999987 46779999997654221 1245688999999
Q ss_pred HhCCCCceeEEeeeeec--CCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 003978 557 KRLRHPNVLLFMGAVTS--PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSS 634 (782)
Q Consensus 557 ~~l~HpnIv~l~~~~~~--~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~ 634 (782)
+.++||||+++++++.. ...+|+||||+++++|.+++. ...+++..++.++.||+.||.|||+++ |+||||||+
T Consensus 91 ~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~ 166 (298)
T 2zv2_A 91 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT--LKPLSEDQARFYFQDLIKGIEYLHYQK--IIHRDIKPS 166 (298)
T ss_dssp HTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC--SSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGG
T ss_pred HhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHH
Confidence 99999999999999986 567899999999999988654 346899999999999999999999999 999999999
Q ss_pred cEEEcCCCcEEEEecCCCcccccccccccCCCCCCcccCcccccCCC---CCchhHHHHHHHHHHHHHcCCCCCCCCChH
Q 003978 635 NLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEP---SDEKSDVYSFGVILWELATEKIPWDNLNSM 711 (782)
Q Consensus 635 NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~---~s~~sDIwSLG~ll~elltG~~Pf~~~~~~ 711 (782)
||||+.++.+||+|||+++.............||+.|+|||++.+.. ++.++|||||||++|+|++|..||......
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~ 246 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM 246 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred HEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHH
Confidence 99999999999999999987655443344568999999999998765 377899999999999999999999988776
Q ss_pred HHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003978 712 QVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 768 (782)
Q Consensus 712 ~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~ 768 (782)
.....+............+++++.+||.+||..||.+|||+.++ ++|+||+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~------l~hp~~~ 297 (298)
T 2zv2_A 247 CLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEI------KLHPWVT 297 (298)
T ss_dssp HHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHH------TTCHHHH
T ss_pred HHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHH------hcCcccc
Confidence 66655543333333445789999999999999999999999999 6789986
No 41
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.5e-43 Score=391.01 Aligned_cols=258 Identities=23% Similarity=0.366 Sum_probs=222.7
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCH----HHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSD----EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~----~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
...++|++++.||+|+||.||+|.+. ++.||||++++..... ...+.+.+|+.+|+.++||||+++++++....
T Consensus 9 ~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 88 (361)
T 2yab_A 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT 88 (361)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC
Confidence 44578999999999999999999984 7789999998754321 12467889999999999999999999999999
Q ss_pred ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC----cEEEEecCC
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW----TVKVGDFGL 651 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~----~vkL~DFGl 651 (782)
.+|+|||||+|++|.+++... ..+++..++.++.||+.||.|||++| |+||||||+|||++.++ .+||+|||+
T Consensus 89 ~~~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 89 DVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEEEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 999999999999999999764 46999999999999999999999999 99999999999998776 799999999
Q ss_pred CcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc--cCCCCC
Q 003978 652 SRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR--LEIPKD 729 (782)
Q Consensus 652 a~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~--~~~p~~ 729 (782)
+....... .....+||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+...... ...+..
T Consensus 166 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 244 (361)
T 2yab_A 166 AHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQ 244 (361)
T ss_dssp CEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTT
T ss_pred ceEcCCCC-ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccC
Confidence 98655432 234567999999999999999999999999999999999999999998887777666433221 122357
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 730 VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 730 ~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
+++++++||.+||..||.+|||+.++ +.|+||+.
T Consensus 245 ~s~~~~~li~~~L~~dP~~R~t~~e~------l~hp~~~~ 278 (361)
T 2yab_A 245 TSELAKDFIRKLLVKETRKRLTIQEA------LRHPWITP 278 (361)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHH------HTSTTTSC
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHH------hcCcCcCC
Confidence 89999999999999999999999999 56788864
No 42
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=6.5e-44 Score=392.75 Aligned_cols=257 Identities=24% Similarity=0.398 Sum_probs=223.2
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCce
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 577 (782)
...++|++++.||+|+||.||+|.+. ++.||||++++... .......+..|..+|..+ +||||+++++++...+.+
T Consensus 17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 96 (353)
T 2i0e_A 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 96 (353)
T ss_dssp --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence 45679999999999999999999985 46799999976432 112345677899999888 799999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|+|||||+||+|.+++.... .+++..++.++.||+.||.|||++| |+||||||+||||+.+|.+||+|||+++....
T Consensus 97 ~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--EEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 99999999999999997643 6899999999999999999999999 99999999999999999999999999986444
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHH
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 737 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~L 737 (782)
........+||+.|+|||++.+..++.++|||||||++|||++|..||...+.......+. .....+|..+++++.+|
T Consensus 174 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~--~~~~~~p~~~s~~~~~l 251 (353)
T 2i0e_A 174 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM--EHNVAYPKSMSKEAVAI 251 (353)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HCCCCCCTTSCHHHHHH
T ss_pred CCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHH--hCCCCCCCCCCHHHHHH
Confidence 4444556789999999999999999999999999999999999999999888877776664 34566788999999999
Q ss_pred HHHhhhhCCCCCCC-----HHHHHHHHHHHHHHHhhc
Q 003978 738 VESCWHSDPQCRPS-----FQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 738 I~~cL~~dP~~RPs-----~~ell~~L~~L~~~~~~~ 769 (782)
|.+||..||.+||+ +.++ +.|+||+.
T Consensus 252 i~~lL~~dP~~R~~~~~~~~~~i------~~h~~f~~ 282 (353)
T 2i0e_A 252 CKGLMTKHPGKRLGCGPEGERDI------KEHAFFRY 282 (353)
T ss_dssp HHHHTCSCTTSCTTCSTTHHHHH------HTSGGGTT
T ss_pred HHHHhhcCHHHcCCCCCCCHHHH------hcCccccC
Confidence 99999999999995 5777 56788864
No 43
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-43 Score=384.96 Aligned_cols=258 Identities=21% Similarity=0.327 Sum_probs=223.1
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
..++|++++.||+|+||.||+|.+. +..||+|++.... .....+.+|+.+|+.++||||+++++++...+.+|+|
T Consensus 3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 79 (321)
T 1tki_A 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG---TDQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT---HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc---ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence 4578999999999999999999984 6679999986432 3345688999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC--CCcEEEEecCCCcccccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK--HWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~--~~~vkL~DFGla~~~~~~ 658 (782)
||||+|++|.+++......+++..++.++.||+.||.|||++| |+||||||+|||++. ++.+||+|||++......
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~g--ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~ 157 (321)
T 1tki_A 80 FEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN--IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157 (321)
T ss_dssp ECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred EEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC
Confidence 9999999999999876667999999999999999999999999 999999999999987 789999999999865443
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc--CCCCCCCHHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL--EIPKDVDPRWAA 736 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~--~~p~~~~~~l~~ 736 (782)
. ......||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+....... .....++.++.+
T Consensus 158 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 236 (321)
T 1tki_A 158 D-NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD 236 (321)
T ss_dssp C-EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHH
T ss_pred C-ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHH
Confidence 2 2234568999999999999888999999999999999999999999888877766664322211 122478999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 737 IVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 737 LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
||.+||..||.+|||+.++ |+|+||+....
T Consensus 237 li~~~L~~dp~~Rpt~~e~------l~hp~~~~~~~ 266 (321)
T 1tki_A 237 FVDRLLVKERKSRMTASEA------LQHPWLKQKIE 266 (321)
T ss_dssp HHHTTSCSSGGGSCCHHHH------HHSHHHHSCGG
T ss_pred HHHHHcCCChhHCcCHHHH------hcChhhccCcc
Confidence 9999999999999999999 67899986543
No 44
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.1e-43 Score=389.87 Aligned_cols=258 Identities=22% Similarity=0.396 Sum_probs=224.1
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
..++|++.+.||+|+||.||+|.+. +..||||++..........+.+.+|+.+++.++|||||++++++...+.+|+|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3568999999999999999999984 77899999988777777778899999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC---CcEEEEecCCCccccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH---WTVKVGDFGLSRLKHE 657 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~---~~vkL~DFGla~~~~~ 657 (782)
||||.+++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.+ +.+||+|||++.....
T Consensus 107 ~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp ECCCCSCBHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred EecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 9999999999999764 46899999999999999999999999 9999999999999764 4599999999986654
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC--CCCCHHHH
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP--KDVDPRWA 735 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p--~~~~~~l~ 735 (782)
.. ......||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+.........+ ..++++++
T Consensus 184 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 262 (362)
T 2bdw_A 184 SE-AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 262 (362)
T ss_dssp CC-SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHH
T ss_pred Cc-ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHH
Confidence 32 2334679999999999999999999999999999999999999999888777766664333222222 35799999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
+||.+||..||.+||++.++ |.|+||+..
T Consensus 263 ~li~~~L~~dP~~R~t~~e~------l~hp~~~~~ 291 (362)
T 2bdw_A 263 SLIDSMLTVNPKKRITADQA------LKVPWICNR 291 (362)
T ss_dssp HHHHHHSCSSGGGSCCHHHH------TTSHHHHTH
T ss_pred HHHHHHcCCChhhCcCHHHH------hcCcccCCC
Confidence 99999999999999999999 567887643
No 45
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.1e-43 Score=393.90 Aligned_cols=262 Identities=27% Similarity=0.387 Sum_probs=216.5
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCC-HHHHHHHHHHHHH-HHhCCCCceeEEeeeeecCCce
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYS-DEVIHSFRQEVSL-MKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~-~~~~~~~~~Ei~i-l~~l~HpnIv~l~~~~~~~~~~ 577 (782)
...++|++++.||+|+||.||+|.++ +..||||++++.... ......+..|..+ ++.++|||||++++++...+.+
T Consensus 35 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~ 114 (373)
T 2r5t_A 35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKL 114 (373)
T ss_dssp CCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEE
T ss_pred CChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEE
Confidence 34578999999999999999999984 567999999876543 3334556667776 5778999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|+|||||+||+|.+++... ..+++..++.++.||+.||.|||++| |+||||||+||||+.+|++||+|||+++....
T Consensus 115 ~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 115 YFVLDYINGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLHSLN--IVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 9999999999999999764 36889999999999999999999999 99999999999999999999999999986544
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHH
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 737 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~L 737 (782)
........+||+.|+|||++.+..++.++|||||||++|||++|..||...+.......+. .....++..++.++++|
T Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~l 269 (373)
T 2r5t_A 192 HNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL--NKPLQLKPNITNSARHL 269 (373)
T ss_dssp CCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHH--HSCCCCCSSSCHHHHHH
T ss_pred CCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH--hcccCCCCCCCHHHHHH
Confidence 4444556789999999999999999999999999999999999999999888877776663 34556778899999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 738 VESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 738 I~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
|.+||..||.+||++.+.++.+ +.|+||+.+
T Consensus 270 i~~lL~~dp~~R~~~~~~~~~i--~~h~~f~~~ 300 (373)
T 2r5t_A 270 LEGLLQKDRTKRLGAKDDFMEI--KSHVFFSLI 300 (373)
T ss_dssp HHHHTCSSGGGSTTTTTTHHHH--HTSGGGTTC
T ss_pred HHHHcccCHHhCCCCCCCHHHH--hCCccccCC
Confidence 9999999999999875332222 467888643
No 46
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.1e-43 Score=394.03 Aligned_cols=263 Identities=31% Similarity=0.545 Sum_probs=230.4
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 576 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 576 (782)
.|++..++|++++.||+|+||.||+|.+. ++.||||+++.. ...+....+.+|+++|+.++|||||++++++...+.
T Consensus 108 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 186 (377)
T 3cbl_A 108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP 186 (377)
T ss_dssp TTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT-SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred ccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCC
Confidence 45677789999999999999999999984 778999998754 345556778899999999999999999999999999
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
+|+|||||++++|.+++......+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+++...
T Consensus 187 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 187 IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC--CIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp CEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--cCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 99999999999999999877777999999999999999999999999 9999999999999999999999999997654
Q ss_pred ccccccc--CCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHH
Q 003978 657 ETYLTTK--TGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPR 733 (782)
Q Consensus 657 ~~~~~~~--~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~ 733 (782)
....... ...+++.|+|||++.+..++.++|||||||++|||++ |..||......+....+. .......|..++++
T Consensus 265 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 343 (377)
T 3cbl_A 265 DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE-KGGRLPCPELCPDA 343 (377)
T ss_dssp TSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHH-TTCCCCCCTTCCHH
T ss_pred CCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHH
Confidence 4322211 2235678999999998889999999999999999998 999999988777665553 34456678889999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003978 734 WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 765 (782)
Q Consensus 734 l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~ 765 (782)
+.+||.+||..||.+|||+.++++.|+++...
T Consensus 344 l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 344 VFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 99999999999999999999999999998764
No 47
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=5.8e-44 Score=405.15 Aligned_cols=259 Identities=25% Similarity=0.453 Sum_probs=217.1
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
....++|+++++||+|+||.||+|.+ .++.||||+++.... .......+.+|+.+++.++||||+++++++...+.+
T Consensus 144 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 223 (446)
T 4ejn_A 144 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRL 223 (446)
T ss_dssp CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEE
T ss_pred CCChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEE
Confidence 34567899999999999999999997 467899999976532 234456678899999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhc-CCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~-~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
|+|||||++++|.+++.... .+++..++.++.||+.||+|||+ ++ ||||||||+||||+.++.+||+|||+++...
T Consensus 224 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~g--iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 224 CFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300 (446)
T ss_dssp EEEECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHHTC--CCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred EEEEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcCC--EEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence 99999999999999997644 68999999999999999999998 88 9999999999999999999999999998654
Q ss_pred cccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHH
Q 003978 657 ETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 736 (782)
Q Consensus 657 ~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~ 736 (782)
.........+||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....+|..+++++.+
T Consensus 301 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~--~~~~~~p~~~~~~~~~ 378 (446)
T 4ejn_A 301 KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL--MEEIRFPRTLGPEAKS 378 (446)
T ss_dssp C-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HCCCCCCTTSCHHHHH
T ss_pred CCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHH--hCCCCCCccCCHHHHH
Confidence 44444556789999999999999999999999999999999999999999888877766663 3455678889999999
Q ss_pred HHHHhhhhCCCCCC-----CHHHHHHHHHHHHHHHhhcc
Q 003978 737 IVESCWHSDPQCRP-----SFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 737 LI~~cL~~dP~~RP-----s~~ell~~L~~L~~~~~~~~ 770 (782)
||.+||..||.+|| ++.++ ++|+||+..
T Consensus 379 li~~~L~~dP~~R~~~~~~t~~el------l~hp~f~~~ 411 (446)
T 4ejn_A 379 LLSGLLKKDPKQRLGGGSEDAKEI------MQHRFFAGI 411 (446)
T ss_dssp HHHHHTCSSTTTSTTCSTTTHHHH------HTSGGGTTC
T ss_pred HHHHHcccCHHHhCCCCCCCHHHH------HhCccccCC
Confidence 99999999999999 99999 678998654
No 48
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.3e-42 Score=368.37 Aligned_cols=267 Identities=21% Similarity=0.365 Sum_probs=231.9
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
..++|++.+.||+|+||.||+|.+. ++.||+|++............+.+|+.+++.++||||+++++++......|+|
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 3478999999999999999999884 67899999988777777778899999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc---EEEEecCCCccccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT---VKVGDFGLSRLKHE 657 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~---vkL~DFGla~~~~~ 657 (782)
|||+.+++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+||+|+.++. +||+|||++.....
T Consensus 84 ~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp ECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 9999999999998765 46899999999999999999999999 999999999999986655 99999999976554
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccC--CCCCCCHHHH
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE--IPKDVDPRWA 735 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~--~p~~~~~~l~ 735 (782)
.. ......||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+........ ....+++++.
T Consensus 161 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T 3kk8_A 161 SE-AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 239 (284)
T ss_dssp SC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHH
T ss_pred Cc-cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHH
Confidence 33 22345799999999999999999999999999999999999999998888777766643333222 2347899999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcCCCCCc
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVGDSTQ 779 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~~~~~~ 779 (782)
+||.+||..||.+|||+.++ +.|+||+..........+
T Consensus 240 ~li~~~l~~dp~~Rps~~~~------l~h~~~~~~~~~~~~~~~ 277 (284)
T 3kk8_A 240 SLIDSMLTVNPKKRITADQA------LKVPWICNRERVASAIHR 277 (284)
T ss_dssp HHHHHHSCSSTTTSCCHHHH------TTSHHHHSCCCGGGSCCC
T ss_pred HHHHHHcccChhhCCCHHHH------hcCccccCChhHHhHhhc
Confidence 99999999999999999999 678999887766655544
No 49
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.7e-43 Score=379.20 Aligned_cols=262 Identities=34% Similarity=0.533 Sum_probs=221.5
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
..++|+++++||+|+||.||++.+. +..||+|++.. ........+.+|+++++.++||||+++++++..+..+++|
T Consensus 8 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 85 (310)
T 3s95_A 8 RPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR--FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85 (310)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc--CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEE
Confidence 3578999999999999999999984 77899998854 3456678899999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 660 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 660 (782)
||||++++|.+++......+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+++.......
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 163 (310)
T 3s95_A 86 TEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT 163 (310)
T ss_dssp EECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEECTTSCEEECCCTTCEECC----
T ss_pred EEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCcCeEEECCCCCEEEeecccceecccccc
Confidence 9999999999999887778999999999999999999999999 99999999999999999999999999976543322
Q ss_pred c--------------ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHh-hccccccC
Q 003978 661 T--------------TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAV-GFMNQRLE 725 (782)
Q Consensus 661 ~--------------~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i-~~~~~~~~ 725 (782)
. .....||+.|+|||++.+..++.++|||||||++|+|++|..||............ ........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T 3s95_A 164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY 243 (310)
T ss_dssp ----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHT
T ss_pred cccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccccc
Confidence 1 11457999999999999999999999999999999999999998754321110000 00011234
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003978 726 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 768 (782)
Q Consensus 726 ~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~ 768 (782)
.+..+++.+.+||.+||..||++|||+.++++.|++++...-.
T Consensus 244 ~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~ 286 (310)
T 3s95_A 244 CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG 286 (310)
T ss_dssp CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccC
Confidence 5678999999999999999999999999999999999876543
No 50
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.5e-43 Score=386.89 Aligned_cols=269 Identities=29% Similarity=0.520 Sum_probs=228.6
Q ss_pred CccccccccccceeEeeeeccCCcEEEEEEEEc-------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeE
Q 003978 495 NDCLDYEILWEDLTIGEQIGQGSCGTVYHAVWY-------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLL 566 (782)
Q Consensus 495 ~~~~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~-------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~ 566 (782)
.+...|++..++|+++++||+|+||.||+|.+. ++.||||+++... .....+.+.+|+++++.+ +|||||+
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC-CHHHHHHHHHHHHHHHhhcCCcceee
Confidence 334567788899999999999999999999853 2569999997543 445567889999999999 7999999
Q ss_pred EeeeeecCCc-eeEEEeecCCCCHHHHHhhcCC-----------------------------------------------
Q 003978 567 FMGAVTSPQR-LCIVTEFLPRGSLFRLLQRNTT----------------------------------------------- 598 (782)
Q Consensus 567 l~~~~~~~~~-~~lv~E~~~ggsL~~~l~~~~~----------------------------------------------- 598 (782)
+++++...+. +++|||||++|+|.+++.....
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 9999887554 8999999999999999976432
Q ss_pred ------------------cchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc--
Q 003978 599 ------------------KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET-- 658 (782)
Q Consensus 599 ------------------~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~-- 658 (782)
.+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++.....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~--ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 1889999999999999999999999 999999999999999999999999999755332
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 737 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~L 737 (782)
........||+.|+|||++.+..++.++|||||||++|+|++ |..||.....................+..+++++.+|
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 328 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 328 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHH
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHH
Confidence 222334568899999999999999999999999999999998 9999988765554444444455667788899999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 738 VESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 738 I~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
|.+||..||.+|||+.+++++|+++....
T Consensus 329 i~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 329 MLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999987643
No 51
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=6.5e-43 Score=370.69 Aligned_cols=261 Identities=30% Similarity=0.547 Sum_probs=226.2
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEcCC-eEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGS-DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 576 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~-~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 576 (782)
..+++..++|++++.||+|+||.||++.+.+. .||||++....... ..+.+|+++++.++||||+++++++...+.
T Consensus 17 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 93 (283)
T 3gen_A 17 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVCTKQRP 93 (283)
T ss_dssp CTTBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCH---HHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred CCccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCH---HHHHHHHHHHhcCCCCCEeeEEEEEecCCC
Confidence 45567778999999999999999999998654 69999998765544 457889999999999999999999999999
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
+|+||||+++++|.+++......+++..++.++.||+.||.|||+++ |+|+||||+||||+.++.+||+|||+++...
T Consensus 94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 171 (283)
T 3gen_A 94 IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171 (283)
T ss_dssp EEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCSGGGEEECTTSCEEECSTTGGGGBC
T ss_pred eEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCccceEEEcCCCCEEEcccccccccc
Confidence 99999999999999999876667999999999999999999999999 9999999999999999999999999997654
Q ss_pred ccc-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHH
Q 003978 657 ETY-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 734 (782)
Q Consensus 657 ~~~-~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l 734 (782)
... .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||...........+.. ......+..+++.+
T Consensus 172 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 250 (283)
T 3gen_A 172 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ-GLRLYRPHLASEKV 250 (283)
T ss_dssp CHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT-TCCCCCCTTCCHHH
T ss_pred ccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhc-ccCCCCCCcCCHHH
Confidence 432 22234457889999999999899999999999999999998 9999999888777666542 33455667789999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 735 AAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 735 ~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
.+||.+||..||.+|||+.+++++|.++..
T Consensus 251 ~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 251 YTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 999999999999999999999999998865
No 52
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=4.3e-43 Score=369.07 Aligned_cols=259 Identities=33% Similarity=0.604 Sum_probs=226.8
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEcCC-eEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYGS-DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~-~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
+++..++|++.+.||+|+||.||++.+.+. .||||+++...... ..+.+|+++++.++||||+++++++.....+|
T Consensus 3 ~~l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 79 (268)
T 3sxs_A 3 MELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE---DEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIY 79 (268)
T ss_dssp TBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCH---HHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred eEechhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcH---HHHHHHHHHHHhCCCCCEeeEEEEEccCCceE
Confidence 355678999999999999999999988654 69999998765544 45788999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
+||||+++++|.+++......+++..++.++.||+.||.|||+++ |+|+||||+||+++.++.+||+|||++......
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 80 IVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ--FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT--EEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred EEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 999999999999999877667999999999999999999999999 999999999999999999999999999765443
Q ss_pred c-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHH
Q 003978 659 Y-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 736 (782)
Q Consensus 659 ~-~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~ 736 (782)
. .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||...........+. .......+..+++.+.+
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~ 236 (268)
T 3sxs_A 158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVS-QGHRLYRPHLASDTIYQ 236 (268)
T ss_dssp CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH-TTCCCCCCTTSCHHHHH
T ss_pred hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHH-cCCCCCCCCcChHHHHH
Confidence 2 22334457788999999999889999999999999999999 999999888777665553 23345566778999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 737 IVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 737 LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
||.+||..||.+|||+.++++.|+.++.
T Consensus 237 li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 237 IMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp HHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred HHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 9999999999999999999999988743
No 53
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.8e-43 Score=388.68 Aligned_cols=254 Identities=22% Similarity=0.369 Sum_probs=224.2
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCC-HHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
...++|++++.||+|+||.||+|.+. ++.||||++.+.... ......+.+|+.+|+.++||||+++++++.....+|
T Consensus 38 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 117 (350)
T 1rdq_E 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLY 117 (350)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred CCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence 34579999999999999999999984 778999999764321 123467888999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
+|||||+|++|.+++.... .+++..++.++.||+.||.|||++| |+||||||+||||+.+|.+||+|||+++.....
T Consensus 118 lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~ 194 (350)
T 1rdq_E 118 MVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp EEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC--cccccCccceEEECCCCCEEEcccccceeccCC
Confidence 9999999999999997653 6899999999999999999999999 999999999999999999999999999865432
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 738 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI 738 (782)
....+||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+.. ....+|..+++++.+||
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~--~~~~~p~~~~~~~~~li 269 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--GKVRFPSHFSSDLKDLL 269 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CCCCCCTTCCHHHHHHH
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHc--CCCCCCCCCCHHHHHHH
Confidence 2355799999999999999999999999999999999999999998888777766643 35667888999999999
Q ss_pred HHhhhhCCCCCCC-----HHHHHHHHHHHHHHHhhc
Q 003978 739 ESCWHSDPQCRPS-----FQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 739 ~~cL~~dP~~RPs-----~~ell~~L~~L~~~~~~~ 769 (782)
.+||..||.+||+ +.++ +.|+||+.
T Consensus 270 ~~lL~~dp~~R~~~~~~~~~ei------~~h~~f~~ 299 (350)
T 1rdq_E 270 RNLLQVDLTKRFGNLKNGVNDI------KNHKWFAT 299 (350)
T ss_dssp HHHSCSCTTTCTTSSTTTTHHH------HTSGGGTT
T ss_pred HHHhhcCHHhccCCccCCHHHH------HhCcCcCC
Confidence 9999999999998 8888 67899864
No 54
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=7e-43 Score=370.60 Aligned_cols=264 Identities=33% Similarity=0.586 Sum_probs=217.4
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEcC-----CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeee
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYG-----SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT 572 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~-----~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~ 572 (782)
..+++..++|++++.||+|+||.||+|.+.. ..||+|++.... .....+.+.+|+.+++.++||||+++++++.
T Consensus 8 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 86 (281)
T 1mp8_A 8 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVIT 86 (281)
T ss_dssp -CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred cceEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCccceEEEEEc
Confidence 3467778899999999999999999998742 348999876532 4556678999999999999999999999985
Q ss_pred cCCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCC
Q 003978 573 SPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLS 652 (782)
Q Consensus 573 ~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla 652 (782)
++..|+||||+++++|.+++......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 87 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 163 (281)
T 1mp8_A 87 -ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLS 163 (281)
T ss_dssp -SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECC----
T ss_pred -cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecccccHHHEEECCCCCEEECccccc
Confidence 56789999999999999999877667999999999999999999999998 999999999999999999999999999
Q ss_pred ccccccc-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCC
Q 003978 653 RLKHETY-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDV 730 (782)
Q Consensus 653 ~~~~~~~-~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~ 730 (782)
+...... .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||...........+.. .....++..+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~-~~~~~~~~~~ 242 (281)
T 1mp8_A 164 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN-GERLPMPPNC 242 (281)
T ss_dssp ---------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-TCCCCCCTTC
T ss_pred cccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHc-CCCCCCCCCC
Confidence 7654432 12234467889999999999999999999999999999997 9999998877766655542 2345677889
Q ss_pred CHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 731 DPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 731 ~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
++.+.+||.+||..||.+|||+.++++.|.++..+.
T Consensus 243 ~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 243 PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999987654
No 55
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=4.3e-43 Score=369.38 Aligned_cols=258 Identities=40% Similarity=0.701 Sum_probs=214.5
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCC--HHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYS--DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
++..++|++.+.||+|+||.||++.+.++.||||+++..... ....+.+.+|+++++.++||||+++++++...+.+|
T Consensus 3 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (271)
T 3dtc_A 3 EIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLC 82 (271)
T ss_dssp BCCTTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CE
T ss_pred ccchhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceE
Confidence 345679999999999999999999999999999998764332 234567889999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCC-CeeecCCCCCcEEEcC--------CCcEEEEec
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNP-PIIHRDLKSSNLLVDK--------HWTVKVGDF 649 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~-~ivHrDIKp~NILl~~--------~~~vkL~DF 649 (782)
+||||+++++|.+++.. ..+++..++.++.||+.||.|||+++. +|+|+||||+|||++. ++.+||+||
T Consensus 83 lv~e~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 83 LVMEFARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp EEEECCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EEEEcCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 99999999999999964 468999999999999999999999873 3889999999999986 678999999
Q ss_pred CCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCC
Q 003978 650 GLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKD 729 (782)
Q Consensus 650 Gla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~ 729 (782)
|++........ ....||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+........++..
T Consensus 161 g~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (271)
T 3dtc_A 161 GLAREWHRTTK--MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPST 238 (271)
T ss_dssp CC---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTT
T ss_pred Ccccccccccc--cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCcc
Confidence 99976544322 2457899999999999999999999999999999999999999998887777666655556677889
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 730 VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 730 ~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
+++.+.+||.+||..||.+|||+.+++++|++|
T Consensus 239 ~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 239 CPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred cCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 999999999999999999999999999998754
No 56
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-43 Score=382.33 Aligned_cols=266 Identities=27% Similarity=0.490 Sum_probs=228.6
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEcC-------CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeee
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYG-------SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGA 570 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~-------~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~ 570 (782)
..++...++|++++.||+|+||.||+|.+.+ +.||||+++... .......+.+|+.+++.++||||++++++
T Consensus 40 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~ 118 (343)
T 1luf_A 40 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGV 118 (343)
T ss_dssp HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ceeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 3456677899999999999999999999864 679999987543 45566789999999999999999999999
Q ss_pred eecCCceeEEEeecCCCCHHHHHhhcC-----------------------CcchHHHHHHHHHHHHHHHHhhhcCCCCee
Q 003978 571 VTSPQRLCIVTEFLPRGSLFRLLQRNT-----------------------TKLDWRRRILMALDIARGVSYLHHCNPPII 627 (782)
Q Consensus 571 ~~~~~~~~lv~E~~~ggsL~~~l~~~~-----------------------~~l~~~~~~~i~~qll~aL~~LH~~~~~iv 627 (782)
+...+.+|+||||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+
T Consensus 119 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--iv 196 (343)
T 1luf_A 119 CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK--FV 196 (343)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT--CC
T ss_pred EccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ee
Confidence 999999999999999999999997642 56899999999999999999999999 99
Q ss_pred ecCCCCCcEEEcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCC
Q 003978 628 HRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIP 704 (782)
Q Consensus 628 HrDIKp~NILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~P 704 (782)
||||||+||||+.++.+||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus 197 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 276 (343)
T 1luf_A 197 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276 (343)
T ss_dssp CSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred cCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999999997543321 22334568899999999999899999999999999999999 9999
Q ss_pred CCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 705 WDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 705 f~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
|...........+.. ......+..+++++.+||.+||..||.+|||+.++++.|+++...+.
T Consensus 277 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 277 YYGMAHEEVIYYVRD-GNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp TTTSCHHHHHHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred CCCCChHHHHHHHhC-CCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 998887776665532 33456778899999999999999999999999999999998876554
No 57
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2e-43 Score=382.28 Aligned_cols=265 Identities=25% Similarity=0.353 Sum_probs=205.3
Q ss_pred cceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
++|+++++||+|+||.||+|.+. ++.||||+++.... ......+.+|+.+++.++|||||++++++..++.+|+|||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCST-TCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc-cccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 57999999999999999999874 77899999976542 2223567789999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcC-----CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 583 FLPRGSLFRLLQRNT-----TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~-----~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
||+ ++|.+++.... ..+++..++.++.||+.||.|||++| |+||||||+||||+.++.+||+|||+++....
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 160 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK--ILHRDLKPQNLLINKRGQLKLGDFGLARAFGI 160 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCSSCEETTS
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCChHHeEEcCCCCEEECcCccceecCC
Confidence 997 59999986532 35889999999999999999999998 99999999999999999999999999987654
Q ss_pred ccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc--------------
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-------------- 722 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~-------------- 722 (782)
.........||+.|+|||++.+ ..++.++|||||||++|+|++|..||...+.......+.....
T Consensus 161 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 240 (317)
T 2pmi_A 161 PVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLP 240 (317)
T ss_dssp CCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCT
T ss_pred CcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhh
Confidence 4334445678999999999987 4689999999999999999999999998887665554422110
Q ss_pred ------------------ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcCCCCCc
Q 003978 723 ------------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVGDSTQ 779 (782)
Q Consensus 723 ------------------~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~~~~~~ 779 (782)
....+..++.++.+||.+||..||.+|||+.++ |+|+||+........+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~------l~hp~f~~~~~~~~~~~~ 309 (317)
T 2pmi_A 241 KYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQA------LHHPWFAEYYHHASMGGS 309 (317)
T ss_dssp TCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHH------TTSGGGGGGCC-------
T ss_pred hcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHH------hCChhhhcccchhhcccc
Confidence 011223578899999999999999999999999 678999988877766554
No 58
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.7e-43 Score=387.14 Aligned_cols=259 Identities=24% Similarity=0.353 Sum_probs=215.3
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC---CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY---SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~---~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
..++|++.+.||+|+||.||+|.+ .++.||||++..... .....+.+.+|+.+++.++|||||++++++...+.+
T Consensus 22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 101 (351)
T 3c0i_A 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 101 (351)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 346899999999999999999998 477899999865321 111246788999999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhc---CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc---EEEEecCC
Q 003978 578 CIVTEFLPRGSLFRLLQRN---TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT---VKVGDFGL 651 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~---~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~---vkL~DFGl 651 (782)
|+|||||+|++|.+++... ...+++..++.++.||+.||.|||+++ |+||||||+||||+.++. +||+|||+
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN--IIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 9999999999999888543 235899999999999999999999999 999999999999986554 99999999
Q ss_pred CcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc--cCCCCC
Q 003978 652 SRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR--LEIPKD 729 (782)
Q Consensus 652 a~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~--~~~p~~ 729 (782)
+.............+||+.|+|||++.+..++.++|||||||++|+|++|..||.... ......+...... ......
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~i~~~~~~~~~~~~~~ 258 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSH 258 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-HHHHHHHHHTCCCCCHHHHTT
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-HHHHHHHHcCCCCCCcccccc
Confidence 9876655444456689999999999999999999999999999999999999998753 3333333221111 111256
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 730 VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 730 ~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
++.++++||.+||..||.+|||+.++ |.|+||+..
T Consensus 259 ~s~~~~~li~~~L~~dP~~R~s~~e~------l~hp~~~~~ 293 (351)
T 3c0i_A 259 ISESAKDLVRRMLMLDPAERITVYEA------LNHPWLKER 293 (351)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHH------HTSHHHHTH
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHH------hcChhhcCC
Confidence 89999999999999999999999999 567888654
No 59
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.3e-43 Score=380.15 Aligned_cols=260 Identities=25% Similarity=0.371 Sum_probs=222.2
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCH----HHHHHHHHHHHHHHhCCCCceeEEeeeeecC
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSD----EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP 574 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~----~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~ 574 (782)
+...++|++.+.||+|+||.||+|.+. +..||||++....... .....+.+|+.+|+.++||||+++++++...
T Consensus 7 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 86 (326)
T 2y0a_A 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK 86 (326)
T ss_dssp SCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred CCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence 344578999999999999999999984 7789999997654321 1246788999999999999999999999999
Q ss_pred CceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC----cEEEEecC
Q 003978 575 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW----TVKVGDFG 650 (782)
Q Consensus 575 ~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~----~vkL~DFG 650 (782)
..+|+|||||++++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||
T Consensus 87 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 87 TDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp SEEEEEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred CEEEEEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHHCC--eEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 9999999999999999999754 46999999999999999999999999 99999999999999877 89999999
Q ss_pred CCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc--cCCCC
Q 003978 651 LSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR--LEIPK 728 (782)
Q Consensus 651 la~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~--~~~p~ 728 (782)
+++...... ......||+.|+|||++.+..++.++|||||||++|+|++|..||...........+...... ...+.
T Consensus 164 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (326)
T 2y0a_A 164 LAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242 (326)
T ss_dssp TCEECCTTS-CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHT
T ss_pred CCeECCCCC-ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccc
Confidence 998654332 223457999999999999999999999999999999999999999988877766655432221 12235
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 729 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 729 ~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
.++..+.+||.+||..||.+|||+.++ |+|+||+..
T Consensus 243 ~~~~~~~~li~~~L~~dP~~Rpt~~e~------l~hp~~~~~ 278 (326)
T 2y0a_A 243 NTSALAKDFIRRLLVKDPKKRMTIQDS------LQHPWIKPK 278 (326)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCHHHH------HHSTTTSCC
T ss_pred cCCHHHHHHHHHHccCChhhCCCHHHH------hcCCCccCC
Confidence 789999999999999999999999999 567888643
No 60
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2e-42 Score=384.58 Aligned_cols=264 Identities=31% Similarity=0.574 Sum_probs=230.6
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEcC---------CeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEe
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYG---------SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFM 568 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~---------~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~ 568 (782)
.+++..++|+++++||+|+||.||+|.+.+ ..||||+++... .......+.+|+++++.+ +|||||+++
T Consensus 63 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpnIv~~~ 141 (382)
T 3tt0_A 63 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLL 141 (382)
T ss_dssp TTBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred ccccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc-CHHHHHHHHHHHHHHHHhcCCchhhhhe
Confidence 456777899999999999999999998743 359999997653 455667889999999999 899999999
Q ss_pred eeeecCCceeEEEeecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 003978 569 GAVTSPQRLCIVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKS 633 (782)
Q Consensus 569 ~~~~~~~~~~lv~E~~~ggsL~~~l~~~~---------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp 633 (782)
+++..++.+|+|||||++++|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||
T Consensus 142 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp 219 (382)
T 3tt0_A 142 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAA 219 (382)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCG
T ss_pred eeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCc
Confidence 99999999999999999999999997643 35899999999999999999999998 99999999
Q ss_pred CcEEEcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 003978 634 SNLLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNS 710 (782)
Q Consensus 634 ~NILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~ 710 (782)
+||||+.++.+||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|+|++ |..||.....
T Consensus 220 ~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~ 299 (382)
T 3tt0_A 220 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 299 (382)
T ss_dssp GGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred ceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 99999999999999999998654332 22334567889999999999999999999999999999999 9999998887
Q ss_pred HHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 711 MQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 711 ~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
......+. .......+..+++++.+||.+||..||.+|||+.++++.|+++....
T Consensus 300 ~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 300 EELFKLLK-EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp HHHHHHHH-TTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHH-cCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 77665553 33456677889999999999999999999999999999999997543
No 61
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.1e-42 Score=386.97 Aligned_cols=264 Identities=23% Similarity=0.367 Sum_probs=219.4
Q ss_pred cccccceeEeeeeccC--CcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc
Q 003978 501 EILWEDLTIGEQIGQG--SCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 576 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G--~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 576 (782)
....++|+++++||+| +||.||+|.+. ++.||||++............+.+|+.+++.++|||||++++++...+.
T Consensus 21 ~~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 100 (389)
T 3gni_B 21 LPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE 100 (389)
T ss_dssp CCCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred cCCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCE
Confidence 3445789999999999 99999999985 7789999999887777788899999999999999999999999999999
Q ss_pred eeEEEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
+|+|||||++++|.+++... ...+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++...
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 101 LWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG--YVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 99999999999999999764 356899999999999999999999999 999999999999999999999999988643
Q ss_pred cccc-------ccccCCCCCCcccCcccccC--CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-----
Q 003978 656 HETY-------LTTKTGKGTPQWMAPEVLRN--EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN----- 721 (782)
Q Consensus 656 ~~~~-------~~~~~~~Gt~~y~aPE~l~~--~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~----- 721 (782)
.... .......||+.|+|||++.+ ..++.++|||||||++|+|++|..||...+.......+....
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL 258 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccc
Confidence 2211 11223478999999999988 678999999999999999999999998765544332221100
Q ss_pred ---------------------------------------cccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 722 ---------------------------------------QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 722 ---------------------------------------~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
.....+..+++++.+||.+||..||.+|||+.++ |
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~el------l 332 (389)
T 3gni_B 259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTL------L 332 (389)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHH------T
T ss_pred cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHH------h
Confidence 0112345688999999999999999999999999 6
Q ss_pred HHHHhhcccC
Q 003978 763 QRQYFQASRS 772 (782)
Q Consensus 763 ~~~~~~~~~~ 772 (782)
+|+||+....
T Consensus 333 ~hp~f~~~~~ 342 (389)
T 3gni_B 333 NHSFFKQIKR 342 (389)
T ss_dssp TSGGGGGC--
T ss_pred cCHHHHHHhh
Confidence 7899987654
No 62
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-43 Score=397.10 Aligned_cols=261 Identities=19% Similarity=0.328 Sum_probs=222.5
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
....++|+++++||+|+||.||+|.+ .++.||||++++... .......+.+|+.++..++||||+++++++.+.+.+
T Consensus 57 ~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~ 136 (412)
T 2vd5_A 57 RLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYL 136 (412)
T ss_dssp SCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred cCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEE
Confidence 34568999999999999999999998 477899999975332 112234578899999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|+|||||+||+|.+++.+....+++..++.++.||+.||.|||+++ ||||||||+||||+.++++||+|||+++....
T Consensus 137 ~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~g--iiHrDLKp~NILld~~g~vkL~DFGla~~~~~ 214 (412)
T 2vd5_A 137 YLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG--YVHRDIKPDNILLDRCGHIRLADFGSCLKLRA 214 (412)
T ss_dssp EEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecccCHHHeeecCCCCEEEeechhheeccC
Confidence 9999999999999999876667999999999999999999999999 99999999999999999999999999976544
Q ss_pred ccc-cccCCCCCCcccCccccc-------CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCC---
Q 003978 658 TYL-TTKTGKGTPQWMAPEVLR-------NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEI--- 726 (782)
Q Consensus 658 ~~~-~~~~~~Gt~~y~aPE~l~-------~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~--- 726 (782)
... .....+||+.|+|||++. +..++.++|||||||++|||++|..||...+.......+........+
T Consensus 215 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~ 294 (412)
T 2vd5_A 215 DGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLV 294 (412)
T ss_dssp TSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC--
T ss_pred CCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCcc
Confidence 322 233568999999999997 356889999999999999999999999998888777766543333333
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCC---CCHHHHHHHHHHHHHHHhhcc
Q 003978 727 PKDVDPRWAAIVESCWHSDPQCR---PSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 727 p~~~~~~l~~LI~~cL~~dP~~R---Ps~~ell~~L~~L~~~~~~~~ 770 (782)
+..+++++++||.+||. +|.+| |++.++ +.|+||+.+
T Consensus 295 ~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei------~~Hpff~~i 334 (412)
T 2vd5_A 295 DEGVPEEARDFIQRLLC-PPETRLGRGGAGDF------RTHPFFFGL 334 (412)
T ss_dssp --CCCHHHHHHHHTTSS-CGGGCTTTTTHHHH------HTSGGGTTC
T ss_pred ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHH------hcCCCcCCC
Confidence 35799999999999999 99998 589999 678999764
No 63
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.4e-43 Score=397.65 Aligned_cols=260 Identities=23% Similarity=0.363 Sum_probs=222.7
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCC-HHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
....++|+++++||+|+||.||+|.+. ++.||||++++.... ......+.+|+.+++.++|||||++++++.+...+
T Consensus 65 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 144 (410)
T 3v8s_A 65 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 144 (410)
T ss_dssp SCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEE
Confidence 345679999999999999999999984 667999999753211 01123467899999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|+|||||+||+|.+++... .+++..++.++.||+.||.|||+++ |+||||||+||||+.+|.+||+|||+++....
T Consensus 145 ~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~g--ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~~ 220 (410)
T 3v8s_A 145 YMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK 220 (410)
T ss_dssp EEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeeECCCCCEEEeccceeEeecc
Confidence 9999999999999999753 5899999999999999999999999 99999999999999999999999999976544
Q ss_pred cc-ccccCCCCCCcccCcccccCCC----CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC--CCC
Q 003978 658 TY-LTTKTGKGTPQWMAPEVLRNEP----SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP--KDV 730 (782)
Q Consensus 658 ~~-~~~~~~~Gt~~y~aPE~l~~~~----~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p--~~~ 730 (782)
.. ......+||+.|+|||++.+.. ++.++|||||||+||+|++|..||...+.......+........+| ..+
T Consensus 221 ~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~ 300 (410)
T 3v8s_A 221 EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDI 300 (410)
T ss_dssp TSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCC
T ss_pred CCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccc
Confidence 32 2344678999999999998766 7789999999999999999999999988888777775433333444 479
Q ss_pred CHHHHHHHHHhhhhCCCC--CCCHHHHHHHHHHHHHHHhhcc
Q 003978 731 DPRWAAIVESCWHSDPQC--RPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 731 ~~~l~~LI~~cL~~dP~~--RPs~~ell~~L~~L~~~~~~~~ 770 (782)
++++++||.+||..+|.+ ||++.++ +.|+||+..
T Consensus 301 s~~~~~li~~lL~~~~~rlgR~~~~ei------~~Hp~f~~~ 336 (410)
T 3v8s_A 301 SKEAKNLICAFLTDREVRLGRNGVEEI------KRHLFFKND 336 (410)
T ss_dssp CHHHHHHHHHHSSCGGGCTTSSCHHHH------HTSGGGCCS
T ss_pred cHHHHHHHHHHccChhhhCCCCCHHHH------hcCccccCC
Confidence 999999999999999988 9999999 678999865
No 64
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.5e-42 Score=378.23 Aligned_cols=259 Identities=27% Similarity=0.423 Sum_probs=228.0
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
...++|.+++.||+|+||.||++.+. ++.||+|++..... .......+.+|+.+++.++||||+++++++...+.+|
T Consensus 38 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 117 (335)
T 2owb_A 38 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF 117 (335)
T ss_dssp TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred ccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEE
Confidence 34578999999999999999999984 56799999986644 4456678899999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
+|||||.+++|.+++... ..+++..++.++.||+.||.|||+++ |+|+||||+||||+.++.+||+|||++......
T Consensus 118 lv~e~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 118 VVLELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp EEECCCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEEecCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 999999999999998764 46899999999999999999999999 999999999999999999999999999866544
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 738 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI 738 (782)
........||+.|+|||++.+..++.++|||||||++|+|++|..||...........+. .....++..+++.+.+||
T Consensus 195 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li 272 (335)
T 2owb_A 195 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK--KNEYSIPKHINPVAASLI 272 (335)
T ss_dssp TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH--HTCCCCCTTSCHHHHHHH
T ss_pred cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHh--cCCCCCCccCCHHHHHHH
Confidence 444445679999999999999999999999999999999999999999887766555543 334567788999999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 739 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 739 ~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
.+||..||.+|||+.++ +.|+||+...
T Consensus 273 ~~~l~~dp~~Rps~~el------l~~~~~~~~~ 299 (335)
T 2owb_A 273 QKMLQTDPTARPTINEL------LNDEFFTSGY 299 (335)
T ss_dssp HHHTCSSGGGSCCGGGG------GGSHHHHTSC
T ss_pred HHHccCChhHCcCHHHH------hcCccccCCC
Confidence 99999999999999999 6789997654
No 65
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.5e-43 Score=400.46 Aligned_cols=262 Identities=20% Similarity=0.351 Sum_probs=223.7
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCH-HHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
....++|+++++||+|+||.||+|.+. ++.||||++++..... .....+.+|+.++..++|||||++++++.+...+
T Consensus 70 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~ 149 (437)
T 4aw2_A 70 RLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNL 149 (437)
T ss_dssp SCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred cCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEE
Confidence 345679999999999999999999985 5679999997532111 1123477899999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|+|||||+||+|.+++......+++..++.++.||+.||.|||+++ ||||||||+||||+.++.+||+|||+++....
T Consensus 150 ~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g--iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~ 227 (437)
T 4aw2_A 150 YLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH--YVHRDIKPDNILMDMNGHIRLADFGSCLKLME 227 (437)
T ss_dssp EEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCC--eEecccCHHHeeEcCCCCEEEcchhhhhhccc
Confidence 9999999999999999876667999999999999999999999999 99999999999999999999999999976543
Q ss_pred cc-ccccCCCCCCcccCccccc-----CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC---C
Q 003978 658 TY-LTTKTGKGTPQWMAPEVLR-----NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP---K 728 (782)
Q Consensus 658 ~~-~~~~~~~Gt~~y~aPE~l~-----~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p---~ 728 (782)
.. ......+||+.|+|||++. +..++.++|||||||++|||++|..||...+..+....+........+| .
T Consensus 228 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~ 307 (437)
T 4aw2_A 228 DGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVT 307 (437)
T ss_dssp TSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCC
T ss_pred CCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccc
Confidence 32 2334468999999999997 5568999999999999999999999999988888777765433334444 4
Q ss_pred CCCHHHHHHHHHhhhhCCCC--CCCHHHHHHHHHHHHHHHhhcc
Q 003978 729 DVDPRWAAIVESCWHSDPQC--RPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 729 ~~~~~l~~LI~~cL~~dP~~--RPs~~ell~~L~~L~~~~~~~~ 770 (782)
.+++++++||.+||..+|++ ||++.++ +.|+||+.+
T Consensus 308 ~~s~~~~dLi~~lL~~~~~r~~r~~~~ei------l~Hpff~~i 345 (437)
T 4aw2_A 308 DVSENAKDLIRRLICSREHRLGQNGIEDF------KKHPFFSGI 345 (437)
T ss_dssp CSCHHHHHHHHTTSSCGGGCTTTTTTHHH------HTSGGGTTC
T ss_pred cCCHHHHHHHHHHhcccccccCCCCHHHH------hCCCccCCC
Confidence 58999999999999888888 9999999 678999754
No 66
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=9.6e-43 Score=374.49 Aligned_cols=261 Identities=24% Similarity=0.367 Sum_probs=215.0
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
.++|+++++||+|+||.||+|.+. ++.||||++..........+.+.+|+++++.++||||+++++++...+.+++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 468999999999999999999984 778999999877666667788899999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
|||++++|.+++... ..+++..++.++.||+.||.|||++| |+|+||||+|||++.++.+||+|||++.........
T Consensus 82 e~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 158 (311)
T 4agu_A 82 EYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCHKHN--CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY 158 (311)
T ss_dssp ECCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EeCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc
Confidence 999998998888654 46899999999999999999999999 999999999999999999999999999876544444
Q ss_pred ccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc------------------
Q 003978 662 TKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ------------------ 722 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~------------------ 722 (782)
.....||+.|+|||++.+ ..++.++|||||||++|+|++|..||...........+.....
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (311)
T 4agu_A 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG 238 (311)
T ss_dssp -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTT
T ss_pred cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccccc
Confidence 445678999999999986 5679999999999999999999999998877665544321100
Q ss_pred -ccC----------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 723 -RLE----------IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 723 -~~~----------~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
... ..+.++.++.+||.+||..||.+|||+.++ ++|+||+..+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el------l~hp~f~~~~~~ 294 (311)
T 4agu_A 239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQL------LHHPYFENIREI 294 (311)
T ss_dssp CCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHH------HTSGGGTTCC--
T ss_pred CcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHH------hcChHHHhccCH
Confidence 000 014578899999999999999999999999 678999876543
No 67
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.8e-42 Score=370.84 Aligned_cols=259 Identities=25% Similarity=0.399 Sum_probs=217.4
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
+...++|++++.||+|+||.||++.+ .+..||||++..... .....+.+.+|+.+++.++||||+++++++...+.+
T Consensus 7 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~ 86 (294)
T 4eqm_A 7 KIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCY 86 (294)
T ss_dssp SCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEE
T ss_pred hHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeE
Confidence 34567999999999999999999997 467899999866543 456678899999999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|+||||++|++|.+++.... ++++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 87 ~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 163 (294)
T 4eqm_A 87 YLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAHDMR--IVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163 (294)
T ss_dssp EEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred EEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence 99999999999999997654 6899999999999999999999999 99999999999999999999999999986544
Q ss_pred cc-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc---ccCCCCCCCHH
Q 003978 658 TY-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ---RLEIPKDVDPR 733 (782)
Q Consensus 658 ~~-~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~---~~~~p~~~~~~ 733 (782)
.. .......||+.|+|||++.+..++.++|||||||++|+|++|..||................. ....+..+++.
T Consensus 164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (294)
T 4eqm_A 164 TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQS 243 (294)
T ss_dssp -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHH
T ss_pred ccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHH
Confidence 32 223345799999999999999999999999999999999999999998877655433321111 12355779999
Q ss_pred HHHHHHHhhhhCCCCCC-CHHHHHHHHHHH
Q 003978 734 WAAIVESCWHSDPQCRP-SFQELVDKLRDL 762 (782)
Q Consensus 734 l~~LI~~cL~~dP~~RP-s~~ell~~L~~L 762 (782)
+.++|.+||..||.+|| +++++.+.|.++
T Consensus 244 l~~li~~~l~~dp~~R~~~~~~l~~~l~~~ 273 (294)
T 4eqm_A 244 LSNVILRATEKDKANRYKTIQEMKDDLSSV 273 (294)
T ss_dssp HHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred HHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence 99999999999999999 888888777654
No 68
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1e-42 Score=371.15 Aligned_cols=262 Identities=37% Similarity=0.636 Sum_probs=212.5
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
..+++..++|++.++||+|+||.||++.+.+ .||||+++.........+.+.+|+.+++.++||||++++++. ....+
T Consensus 17 ~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~-~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~ 94 (289)
T 3og7_A 17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQL 94 (289)
T ss_dssp -CCBCCTTSCEEEEEEEECSSEEEEEEESSS-EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSC
T ss_pred CCCccCccceeeeeEecCCCCeEEEEEEEcC-ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCcc
Confidence 4567788899999999999999999998755 599999987777777788999999999999999999999965 45678
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
++|||||.+++|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++.....
T Consensus 95 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~--i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 95 AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp EEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred EEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC--cccccCccceEEECCCCCEEEccceecccccc
Confidence 9999999999999999877778999999999999999999999999 99999999999999999999999999975432
Q ss_pred c--cccccCCCCCCcccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhh-cccc---ccCCCC
Q 003978 658 T--YLTTKTGKGTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVG-FMNQ---RLEIPK 728 (782)
Q Consensus 658 ~--~~~~~~~~Gt~~y~aPE~l~---~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~-~~~~---~~~~p~ 728 (782)
. ........||+.|+|||++. +..++.++|||||||++|+|++|..||............. .... ...+..
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (289)
T 3og7_A 173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRS 252 (289)
T ss_dssp -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCT
T ss_pred ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccc
Confidence 1 12223456899999999987 6667889999999999999999999998766554333332 1111 223445
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003978 729 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 763 (782)
Q Consensus 729 ~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~ 763 (782)
.+++.+.+||.+||..||.+|||+.++++.|+++.
T Consensus 253 ~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 253 NCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 78999999999999999999999999999998764
No 69
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.8e-42 Score=372.33 Aligned_cols=262 Identities=29% Similarity=0.549 Sum_probs=227.3
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEc-------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeee
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWY-------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAV 571 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~-------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~ 571 (782)
.++...++|++.+.||+|+||.||++.+. +..||||++.... .....+.+.+|+.+++.++||||+++++++
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~ 95 (314)
T 2ivs_A 17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHPHVIKLYGAC 95 (314)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred ccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCceeeEEEEE
Confidence 45666789999999999999999999873 2569999987543 455667899999999999999999999999
Q ss_pred ecCCceeEEEeecCCCCHHHHHhhcC-----------------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeee
Q 003978 572 TSPQRLCIVTEFLPRGSLFRLLQRNT-----------------------TKLDWRRRILMALDIARGVSYLHHCNPPIIH 628 (782)
Q Consensus 572 ~~~~~~~lv~E~~~ggsL~~~l~~~~-----------------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivH 628 (782)
...+.+|+||||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+|
T Consensus 96 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH 173 (314)
T 2ivs_A 96 SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVH 173 (314)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT--EEC
T ss_pred ecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC--Ccc
Confidence 99999999999999999999997643 24899999999999999999999999 999
Q ss_pred cCCCCCcEEEcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCC
Q 003978 629 RDLKSSNLLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPW 705 (782)
Q Consensus 629 rDIKp~NILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf 705 (782)
|||||+||||+.++.+||+|||++....... .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||
T Consensus 174 ~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 253 (314)
T 2ivs_A 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253 (314)
T ss_dssp CCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred cccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999997654322 22334567889999999999889999999999999999999 99999
Q ss_pred CCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 706 DNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 706 ~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
...........+. .......+..+++++.+||.+||..||.+||++.++++.|+++..
T Consensus 254 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 254 PGIPPERLFNLLK-TGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp TTCCGGGHHHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHhh-cCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 9887766655543 233556778899999999999999999999999999999998864
No 70
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.2e-42 Score=371.32 Aligned_cols=262 Identities=30% Similarity=0.502 Sum_probs=216.6
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE------cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec-
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW------YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS- 573 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~------~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~- 573 (782)
+...++|+++++||+|+||.||+|.+ .++.||||++... .....+.+.+|+.+++.++||||+++++++..
T Consensus 6 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 83 (295)
T 3ugc_A 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA 83 (295)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHH
T ss_pred cCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 34567999999999999999999985 4667999998643 35566789999999999999999999999854
Q ss_pred -CCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCC
Q 003978 574 -PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLS 652 (782)
Q Consensus 574 -~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla 652 (782)
...+++|||||++++|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++
T Consensus 84 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~~~~~kl~Dfg~~ 161 (295)
T 3ugc_A 84 GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLT 161 (295)
T ss_dssp HHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred CCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHhhEEEcCCCeEEEccCccc
Confidence 35689999999999999999887777999999999999999999999998 999999999999999999999999999
Q ss_pred ccccccc---ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH---------------HH
Q 003978 653 RLKHETY---LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ---------------VI 714 (782)
Q Consensus 653 ~~~~~~~---~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~---------------~~ 714 (782)
....... .......+++.|+|||++.+..++.++|||||||++|+|++|..||....... ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (295)
T 3ugc_A 162 KVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 241 (295)
T ss_dssp C-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred ccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHH
Confidence 8654332 12233457788999999999999999999999999999999999986542211 00
Q ss_pred HHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 715 GAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 715 ~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
............+..+++++.+||.+||..||.+|||+.++++.|+++...+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 242 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 1111123355667889999999999999999999999999999999987643
No 71
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1e-42 Score=368.72 Aligned_cols=263 Identities=29% Similarity=0.487 Sum_probs=223.8
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCH-HHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
...++|++++.||+|+||.||+|.+. +..||||++....... .....+.+|+.+++.++||||+++++++......+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 85 (279)
T 3fdn_A 6 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVY 85 (279)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred eecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEE
Confidence 44579999999999999999999985 4569999987543221 22456888999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
+||||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+|+||||+||||+.++.+||+|||++......
T Consensus 86 lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~--i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 86 LILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp EEECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTTT--CEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--EecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 999999999999999764 46899999999999999999999998 999999999999999999999999998654433
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 738 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI 738 (782)
. .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+. .....++..++..+.+||
T Consensus 163 ~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li 238 (279)
T 3fdn_A 163 R--RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPDFVTEGARDLI 238 (279)
T ss_dssp -------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH--HTCCCCCTTSCHHHHHHH
T ss_pred c--ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHH--hCCCCCCCcCCHHHHHHH
Confidence 2 234578999999999999999999999999999999999999999888777666553 334567788999999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcCCCC
Q 003978 739 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVGDS 777 (782)
Q Consensus 739 ~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~~~~ 777 (782)
.+||..||.+|||+.++ +.|+||+.....-...
T Consensus 239 ~~~l~~~p~~Rps~~e~------l~h~~~~~~~~~~~~~ 271 (279)
T 3fdn_A 239 SRLLKHNPSQRPMLREV------LEHPWITANSSKPSNC 271 (279)
T ss_dssp HHHCCSSGGGSCCHHHH------HHCHHHHHHCSSCCCC
T ss_pred HHHhccChhhCCCHHHH------hhCccccCCccCcccc
Confidence 99999999999999999 6789998766554433
No 72
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2e-42 Score=393.21 Aligned_cols=256 Identities=32% Similarity=0.616 Sum_probs=224.0
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC-ce
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ-RL 577 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~-~~ 577 (782)
.+++..++|++.++||+|+||.||++.+.++.||||+++... ..+.+.+|+.+|+.++|||||++++++.... .+
T Consensus 187 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 262 (450)
T 1k9a_A 187 GWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL 262 (450)
T ss_dssp TCBCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCE
T ss_pred ccccChHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCce
Confidence 456778899999999999999999999999999999997654 2356889999999999999999999986654 79
Q ss_pred eEEEeecCCCCHHHHHhhcCC-cchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTT-KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~-~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
|+|||||++|+|.+++..... .+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+++...
T Consensus 263 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 263 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp EEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 999999999999999986543 3689999999999999999999999 9999999999999999999999999997543
Q ss_pred cccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHH
Q 003978 657 ETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWA 735 (782)
Q Consensus 657 ~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~ 735 (782)
.. .....+++.|+|||++.+..++.++|||||||+||||++ |..||......+....+. ...++..|..+++++.
T Consensus 341 ~~---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~-~~~~~~~p~~~~~~l~ 416 (450)
T 1k9a_A 341 ST---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGCPPAVY 416 (450)
T ss_dssp ---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHH-TTCCCCCCTTCCHHHH
T ss_pred cc---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCCcCCHHHH
Confidence 32 223467899999999999999999999999999999998 999999887776665553 3345677889999999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
+||.+||..||.+|||+.++++.|+++..
T Consensus 417 ~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 417 DVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999988764
No 73
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.8e-42 Score=362.02 Aligned_cols=259 Identities=31% Similarity=0.581 Sum_probs=227.4
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEE-cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVW-YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~-~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
|.+..++|++.+.||+|+||.||++.+ .+..||+|++....... +.+.+|+.+++.++||||+++++++...+.+|
T Consensus 3 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 79 (267)
T 3t9t_A 3 WVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPIC 79 (267)
T ss_dssp CBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCH---HHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred eEEchhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCH---HHHHHHHHHHHhCCCCCEeeEEEEEccCCCeE
Confidence 456678999999999999999999998 45679999998765443 46788999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
+||||+++++|.+++......+++..++.++.||+.||.|||+++ |+|+||||+||+++.++.+||+|||++......
T Consensus 80 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 80 LVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp EEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred EEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCchheEEECCCCCEEEcccccccccccc
Confidence 999999999999999877677999999999999999999999999 999999999999999999999999999765432
Q ss_pred c-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHH
Q 003978 659 Y-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 736 (782)
Q Consensus 659 ~-~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~ 736 (782)
. .......+++.|+|||++.+..++.++|||||||++|+|++ |..||...........+.. ......+..++..+.+
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~-~~~~~~~~~~~~~l~~ 236 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST-GFRLYKPRLASTHVYQ 236 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-TCCCCCCTTSCHHHHH
T ss_pred cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhc-CCcCCCCccCcHHHHH
Confidence 2 22234467889999999998889999999999999999999 8999998887776666542 2344566778999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 737 IVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 737 LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
||.+||..||.+||++.++++.|+++..
T Consensus 237 li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 237 IMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999999998865
No 74
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=7.4e-43 Score=388.39 Aligned_cols=258 Identities=22% Similarity=0.372 Sum_probs=218.4
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
++..++|++++.||+|+||.||+|.+. ++.||||++.+... .......+.+|+.+|+.++|||||++++++.....+
T Consensus 11 ~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 90 (384)
T 4fr4_A 11 DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDM 90 (384)
T ss_dssp CCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 456689999999999999999999984 56799999976432 122346788899999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|+|||||.||+|..++... ..+++..++.++.||+.||.|||++| |+||||||+||||+.+|.+||+|||+++....
T Consensus 91 ~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 91 FMVVDLLLGGDLRYHLQQN-VHFKEETVKLFICELVMALDYLQNQR--IIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp EEEECCCTTEEHHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 9999999999999999764 46999999999999999999999999 99999999999999999999999999986543
Q ss_pred ccccccCCCCCCcccCcccccC---CCCCchhHHHHHHHHHHHHHcCCCCCCCCCh---HHHHHHhhccccccCCCCCCC
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRN---EPSDEKSDVYSFGVILWELATEKIPWDNLNS---MQVIGAVGFMNQRLEIPKDVD 731 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~---~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~---~~~~~~i~~~~~~~~~p~~~~ 731 (782)
. ......+||+.|+|||++.+ ..++.++|||||||++|+|++|..||..... ......+ ......+|..++
T Consensus 168 ~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~--~~~~~~~p~~~s 244 (384)
T 4fr4_A 168 E-TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF--ETTVVTYPSAWS 244 (384)
T ss_dssp T-CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHH--HHCCCCCCTTSC
T ss_pred C-CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHH--hhcccCCCCcCC
Confidence 3 23346689999999999974 4588999999999999999999999975432 2222222 234566778899
Q ss_pred HHHHHHHHHhhhhCCCCCCC-HHHHHHHHHHHHHHHhhcc
Q 003978 732 PRWAAIVESCWHSDPQCRPS-FQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 732 ~~l~~LI~~cL~~dP~~RPs-~~ell~~L~~L~~~~~~~~ 770 (782)
+++.+||.+||..||.+||+ +.++ +.|+||+..
T Consensus 245 ~~~~~li~~lL~~dP~~R~s~~~~l------~~hp~f~~~ 278 (384)
T 4fr4_A 245 QEMVSLLKKLLEPNPDQRFSQLSDV------QNFPYMNDI 278 (384)
T ss_dssp HHHHHHHHHHSCSSGGGSCCSHHHH------HTSGGGTTC
T ss_pred HHHHHHHHHHhcCCHhHhcccHHHH------HcChhhhcC
Confidence 99999999999999999998 7777 467888643
No 75
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-42 Score=378.61 Aligned_cols=265 Identities=28% Similarity=0.461 Sum_probs=222.9
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEc-------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEee
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWY-------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMG 569 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~-------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~ 569 (782)
..+++..++|++++.||+|+||.||+|.+. +..||||++.... .......+.+|+.+++.+ +||||+++++
T Consensus 38 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 116 (344)
T 1rjb_A 38 LKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLG 116 (344)
T ss_dssp GGGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cCcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence 456778899999999999999999999972 3469999997543 233456788999999999 8999999999
Q ss_pred eeecCCceeEEEeecCCCCHHHHHhhcCC----------------------cchHHHHHHHHHHHHHHHHhhhcCCCCee
Q 003978 570 AVTSPQRLCIVTEFLPRGSLFRLLQRNTT----------------------KLDWRRRILMALDIARGVSYLHHCNPPII 627 (782)
Q Consensus 570 ~~~~~~~~~lv~E~~~ggsL~~~l~~~~~----------------------~l~~~~~~~i~~qll~aL~~LH~~~~~iv 627 (782)
++...+.+|+|||||++++|.+++..... .+++..++.++.||+.||.|||+++ |+
T Consensus 117 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--iv 194 (344)
T 1rjb_A 117 ACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS--CV 194 (344)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT--EE
T ss_pred EEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--cc
Confidence 99999999999999999999999976532 3788999999999999999999999 99
Q ss_pred ecCCCCCcEEEcCCCcEEEEecCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCC
Q 003978 628 HRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIP 704 (782)
Q Consensus 628 HrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~P 704 (782)
||||||+||||+.++.+||+|||++........ ......||+.|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus 195 H~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 274 (344)
T 1rjb_A 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 274 (344)
T ss_dssp ETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred cCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999976543321 2223457889999999999999999999999999999998 9999
Q ss_pred CCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003978 705 WDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 765 (782)
Q Consensus 705 f~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~ 765 (782)
|...........+.........+..+++++.+||.+||..||.+|||+.+++++|..+...
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 275 YPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp STTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred cccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 9887655544444334445667788999999999999999999999999999999887543
No 76
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-43 Score=387.97 Aligned_cols=255 Identities=28% Similarity=0.481 Sum_probs=217.7
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCH-HHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
..++|++.+.||+|+||.||+|.+ .++.||||++.+..... .....+.+|+.+++.++||||+++++++.....+|+
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 457899999999999999999998 57789999997543211 123568899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
||||+ +|+|.+++... ..+++..++.++.||+.||.|||++| |+||||||+|||++.++.+||+|||++.......
T Consensus 87 v~E~~-~g~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEK-KRMTEDEGRRFFQQIICAIEYCHRHK--IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp EECCC-CEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred EEECC-CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 99999 78999998764 36899999999999999999999999 9999999999999999999999999998655432
Q ss_pred ccccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHH
Q 003978 660 LTTKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 738 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~~~~~-s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI 738 (782)
.....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...........+ ......+|..+++++.+||
T Consensus 163 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i--~~~~~~~p~~~s~~~~~li 239 (336)
T 3h4j_B 163 -FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV--NSCVYVMPDFLSPGAQSLI 239 (336)
T ss_dssp -TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCC--CSSCCCCCTTSCHHHHHHH
T ss_pred -ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHH--HcCCCCCcccCCHHHHHHH
Confidence 2345689999999999998876 68999999999999999999999876543322222 2234557788999999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 739 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 739 ~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
.+||..||.+|||+.++ ++|+||+..
T Consensus 240 ~~~L~~dP~~Rpt~~ei------l~hp~~~~~ 265 (336)
T 3h4j_B 240 RRMIVADPMQRITIQEI------RRDPWFNVN 265 (336)
T ss_dssp HTTSCSSGGGSCCHHHH------TTCHHHHTT
T ss_pred HHHcCCChhHCcCHHHH------HhChhhccC
Confidence 99999999999999999 678999754
No 77
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8.1e-43 Score=368.67 Aligned_cols=258 Identities=28% Similarity=0.499 Sum_probs=202.7
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCC-HHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
...++|+++++||+|+||.||+|.+ .++.||+|++...... .+....+.+|+.+++.++||||+++++++...+.++
T Consensus 10 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 89 (275)
T 2eue_A 10 AHIGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEII 89 (275)
T ss_dssp CBCCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEE
T ss_pred CcccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEE
Confidence 3456899999999999999999987 5778999999765543 234567889999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
+||||+ +++|.+++... ..+++..++.++.||+.||.|||++| |+|+||||+|||++.++.+||+|||++......
T Consensus 90 lv~e~~-~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 165 (275)
T 2eue_A 90 MVIEYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp EEEECC-CEEHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTSCEEECCSSCC------
T ss_pred EEehhc-CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCChHhEEECCCCCEEEeecccceeccCc
Confidence 999999 77898888764 46899999999999999999999999 999999999999999999999999999765443
Q ss_pred cccccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 737 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~-s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~L 737 (782)
.. .....||+.|+|||++.+..+ +.++|||||||++|+|++|..||...........+. .....++..+++.+.+|
T Consensus 166 ~~-~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l 242 (275)
T 2eue_A 166 NF-LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS--NGVYTLPKFLSPGAAGL 242 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HTCCCCCTTSCHHHHHH
T ss_pred cc-ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--hCCCCCCccCCHHHHHH
Confidence 22 234578999999999988776 789999999999999999999999888776665553 34556788899999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 738 VESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 738 I~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
|.+||..||.+|||+.++ ++|+||+...+
T Consensus 243 i~~~l~~dP~~Rps~~e~------l~h~~f~~~~~ 271 (275)
T 2eue_A 243 IKRMLIVNPLNRISIHEI------MQDDWFKVDLP 271 (275)
T ss_dssp HHHHSCSSGGGSCCHHHH------TTCHHHHTTCC
T ss_pred HHHHhhcCHhHCCCHHHH------hhCCeecccch
Confidence 999999999999999999 67899987543
No 78
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.7e-42 Score=370.70 Aligned_cols=265 Identities=27% Similarity=0.469 Sum_probs=227.0
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEc-------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEee
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWY-------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMG 569 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~-------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~ 569 (782)
..++...++|++++.||+|+||.||+|.+. +..||||+++... .....+.+.+|+.+++.+ +||||+++++
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~ 94 (313)
T 1t46_A 16 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLLG 94 (313)
T ss_dssp GGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cccccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch-hHHHHHHHHHHHHHHhhcccCCCeeeEEE
Confidence 456777889999999999999999999862 3579999997543 344567889999999999 8999999999
Q ss_pred eeecCCceeEEEeecCCCCHHHHHhhcCC-----------------cchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCC
Q 003978 570 AVTSPQRLCIVTEFLPRGSLFRLLQRNTT-----------------KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLK 632 (782)
Q Consensus 570 ~~~~~~~~~lv~E~~~ggsL~~~l~~~~~-----------------~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIK 632 (782)
++...+..++||||+++++|.+++..... .+++..++.++.||+.||.|||+++ |+|+|||
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlk 172 (313)
T 1t46_A 95 ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLA 172 (313)
T ss_dssp EECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCS
T ss_pred EEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCc
Confidence 99999999999999999999999976542 4899999999999999999999998 9999999
Q ss_pred CCcEEEcCCCcEEEEecCCCcccccccc--cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCC
Q 003978 633 SSNLLVDKHWTVKVGDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLN 709 (782)
Q Consensus 633 p~NILl~~~~~vkL~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~ 709 (782)
|+||||+.++.+||+|||++........ ......||+.|+|||++.+..++.++|||||||++|+|++ |..||....
T Consensus 173 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 252 (313)
T 1t46_A 173 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP 252 (313)
T ss_dssp GGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred cceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCccc
Confidence 9999999999999999999976544322 2223457889999999999999999999999999999999 999998876
Q ss_pred hHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003978 710 SMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 765 (782)
Q Consensus 710 ~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~ 765 (782)
.................+..++.++.+||.+||..||.+|||+.++++.|+++...
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 253 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp SSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred chhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 55444444333445556778999999999999999999999999999999887664
No 79
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.7e-42 Score=364.17 Aligned_cols=270 Identities=24% Similarity=0.467 Sum_probs=230.8
Q ss_pred cccccceeEee-eeccCCcEEEEEEEE----cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 501 EILWEDLTIGE-QIGQGSCGTVYHAVW----YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 501 e~~~~~y~i~~-~IG~G~~G~Vy~~~~----~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
....++|.+.+ .||+|+||.||+|.+ .+..||||+++... .....+.+.+|+++++.++||||+++++++. .+
T Consensus 5 ~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~ 82 (287)
T 1u59_A 5 FLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AE 82 (287)
T ss_dssp BCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SS
T ss_pred cccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc-chhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CC
Confidence 34557888887 999999999999986 45679999997643 4556778999999999999999999999994 56
Q ss_pred ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
.+++||||+++++|.+++......+++..++.++.||+.||.|||+++ |+|+||||+||||+.++.+||+|||++...
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 83 ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN--FVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred CcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCC--EeeCCCchheEEEcCCCCEEECcccceeee
Confidence 789999999999999999876677999999999999999999999999 999999999999999999999999999765
Q ss_pred cccc---ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCC
Q 003978 656 HETY---LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVD 731 (782)
Q Consensus 656 ~~~~---~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~ 731 (782)
.... .......||+.|+|||++.+..++.++|||||||++|+|++ |..||...........+. ......++..++
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~-~~~~~~~~~~~~ 239 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-QGKRMECPPECP 239 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHH-TTCCCCCCTTCC
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHh-cCCcCCCCCCcC
Confidence 4322 12233457899999999998889999999999999999998 999999888777665553 234566778999
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcCC
Q 003978 732 PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVG 775 (782)
Q Consensus 732 ~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~~ 775 (782)
+++.+||.+||..||.+||++.+++++|.++....-......+.
T Consensus 240 ~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~~~~~~ 283 (287)
T 1u59_A 240 PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGHHH 283 (287)
T ss_dssp HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTCSSCCC
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcccCCcc
Confidence 99999999999999999999999999999998777655544433
No 80
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.3e-42 Score=381.47 Aligned_cols=258 Identities=26% Similarity=0.368 Sum_probs=204.0
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
+...++|++.+.||+|+||.||+|.+. ++.||||+++... ..+.+.+|+.+|+.++||||+++++++.....+|
T Consensus 49 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 124 (349)
T 2w4o_A 49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEIS 124 (349)
T ss_dssp SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEE
Confidence 445678999999999999999999985 5679999997543 2356778999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC---CCcEEEEecCCCccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK---HWTVKVGDFGLSRLK 655 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~---~~~vkL~DFGla~~~ 655 (782)
+||||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+. ++.+||+|||+++..
T Consensus 125 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~ 201 (349)
T 2w4o_A 125 LVLELVTGGELFDRIVEK-GYYSERDAADAVKQILEAVAYLHENG--IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201 (349)
T ss_dssp EEECCCCSCBHHHHHTTC-SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred EEEEeCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence 999999999999999764 46899999999999999999999998 999999999999975 889999999999865
Q ss_pred ccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH-HHHHhhccccc--cCCCCCCCH
Q 003978 656 HETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ-VIGAVGFMNQR--LEIPKDVDP 732 (782)
Q Consensus 656 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~-~~~~i~~~~~~--~~~p~~~~~ 732 (782)
.... ......||+.|+|||++.+..++.++|||||||++|+|++|..||....... ....+...... ......++.
T Consensus 202 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 280 (349)
T 2w4o_A 202 EHQV-LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSL 280 (349)
T ss_dssp ------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCH
T ss_pred Cccc-ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCH
Confidence 4432 2234579999999999999999999999999999999999999998766544 33333222211 223356899
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 733 RWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 733 ~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
++.+||.+||..||++|||+.++ |+|+||+....
T Consensus 281 ~~~~li~~~L~~dP~~Rpt~~e~------l~hp~~~~~~~ 314 (349)
T 2w4o_A 281 NAKDLVRKLIVLDPKKRLTTFQA------LQHPWVTGKAA 314 (349)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHH------HHSTTTTSTTC
T ss_pred HHHHHHHHHccCChhhCcCHHHH------hcCcccCCCcc
Confidence 99999999999999999999999 67899976554
No 81
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.1e-42 Score=377.03 Aligned_cols=263 Identities=24% Similarity=0.385 Sum_probs=217.8
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE-cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCC--CceeEEeeeeecCCce
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW-YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRH--PNVLLFMGAVTSPQRL 577 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~-~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~H--pnIv~l~~~~~~~~~~ 577 (782)
.+..++|++++.||+|+||.||++.. .++.||||++............+.+|+.+|+.+.| |||+++++++..+..+
T Consensus 5 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~ 84 (343)
T 3dbq_A 5 SVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 84 (343)
T ss_dssp ESSSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred eeecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEE
Confidence 34567899999999999999999987 46679999998877777778889999999999986 9999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|+|||++ +++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+ ++.+||+|||+++....
T Consensus 85 ~lv~e~~-~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~--iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~ 159 (343)
T 3dbq_A 85 YMVMECG-NIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 159 (343)
T ss_dssp EEEECCC-SEEHHHHHHHS-CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred EEEEeCC-CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence 9999955 78999999864 46899999999999999999999999 99999999999997 57899999999986543
Q ss_pred ccc--cccCCCCCCcccCcccccC-----------CCCCchhHHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHhhccccc
Q 003978 658 TYL--TTKTGKGTPQWMAPEVLRN-----------EPSDEKSDVYSFGVILWELATEKIPWDNLNS-MQVIGAVGFMNQR 723 (782)
Q Consensus 658 ~~~--~~~~~~Gt~~y~aPE~l~~-----------~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~-~~~~~~i~~~~~~ 723 (782)
... ......||+.|+|||++.+ ..++.++|||||||++|+|++|..||..... ......+......
T Consensus 160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~ 239 (343)
T 3dbq_A 160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE 239 (343)
T ss_dssp ----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSC
T ss_pred ccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcc
Confidence 321 2235579999999999865 6678899999999999999999999987543 2333344333445
Q ss_pred cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcC
Q 003978 724 LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTV 774 (782)
Q Consensus 724 ~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~ 774 (782)
..++...+.++.+||.+||..||.+|||+.++ |.|+||+......
T Consensus 240 ~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~------l~hp~~~~~~~~~ 284 (343)
T 3dbq_A 240 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL------LAHPYVQIQTHPV 284 (343)
T ss_dssp CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHH------HTSHHHHSCCC--
T ss_pred cCCcccCCHHHHHHHHHHcCCChhHCCCHHHH------HhCccccccCCcc
Confidence 66778889999999999999999999999999 6789998765543
No 82
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3.8e-42 Score=381.40 Aligned_cols=252 Identities=25% Similarity=0.358 Sum_probs=211.9
Q ss_pred eEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeecC
Q 003978 508 TIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLP 585 (782)
Q Consensus 508 ~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ 585 (782)
...+.||+|+||.||+|.. .++.||+|+++... ....+.+.+|+++|+.++|||||++++++...+.+|+|||||+
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~ 169 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG--MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVD 169 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc--cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 3367899999999999987 47789999997644 2345678899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE--cCCCcEEEEecCCCccccccccccc
Q 003978 586 RGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV--DKHWTVKVGDFGLSRLKHETYLTTK 663 (782)
Q Consensus 586 ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl--~~~~~vkL~DFGla~~~~~~~~~~~ 663 (782)
+++|.+++......+++..++.++.||+.||.|||+++ |+||||||+|||| +.++.+||+|||+++...... ...
T Consensus 170 ~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~-~~~ 246 (373)
T 2x4f_A 170 GGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY--ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE-KLK 246 (373)
T ss_dssp TCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC-BCC
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc-ccc
Confidence 99999999776667999999999999999999999999 9999999999999 567899999999998654432 233
Q ss_pred CCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc--cCCCCCCCHHHHHHHHHh
Q 003978 664 TGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR--LEIPKDVDPRWAAIVESC 741 (782)
Q Consensus 664 ~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~--~~~p~~~~~~l~~LI~~c 741 (782)
...||+.|+|||++.+..++.++|||||||++|+|++|..||...+....+..+...... ......+++++.+||.+|
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~ 326 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKL 326 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTT
T ss_pred cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHH
Confidence 457999999999999999999999999999999999999999988887766665432221 122356899999999999
Q ss_pred hhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 742 WHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 742 L~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
|..||.+|||+.++ |+|+||+..
T Consensus 327 L~~dp~~Rps~~e~------l~hp~~~~~ 349 (373)
T 2x4f_A 327 LIKEKSWRISASEA------LKHPWLSDH 349 (373)
T ss_dssp SCSSGGGSCCHHHH------HHSHHHHCH
T ss_pred cCCChhhCCCHHHH------hcCcCcCCC
Confidence 99999999999999 567888643
No 83
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.5e-43 Score=371.80 Aligned_cols=260 Identities=25% Similarity=0.433 Sum_probs=198.8
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCC-HHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
..++|++.+.||+|+||.||+|.. .++.||||++...... ......+.+|+.+++.++||||+++++++...+.+|+
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 346899999999999999999997 5778999999754321 1234678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
||||+++++|.+++......+++..++.++.||+.||.|||+++ |+|+||||+||+++.++.+||+|||++.......
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG--ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 99999999999999877678999999999999999999999999 9999999999999999999999999998665443
Q ss_pred ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHH
Q 003978 660 LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVE 739 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~ 739 (782)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||...........+ ......++..++.++.+||.
T Consensus 167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~ 244 (278)
T 3cok_A 167 EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV--VLADYEMPSFLSIEAKDLIH 244 (278)
T ss_dssp -------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----C--CSSCCCCCTTSCHHHHHHHH
T ss_pred CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHH--hhcccCCccccCHHHHHHHH
Confidence 3334567899999999999988999999999999999999999999877655444333 22344567789999999999
Q ss_pred HhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 740 SCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 740 ~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
+||..||.+|||+.++ +.|+||+....
T Consensus 245 ~~l~~dp~~Rps~~~~------l~h~~~~~~~~ 271 (278)
T 3cok_A 245 QLLRRNPADRLSLSSV------LDHPFMSRNSS 271 (278)
T ss_dssp HHSCSSGGGSCCHHHH------TTSTTTC----
T ss_pred HHcccCHhhCCCHHHH------hcCccccCCCC
Confidence 9999999999999999 67899876544
No 84
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.4e-42 Score=375.12 Aligned_cols=274 Identities=32% Similarity=0.535 Sum_probs=235.3
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEc-------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeee
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWY-------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAV 571 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~-------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~ 571 (782)
.+++..++|++.+.||+|+||.||+|.+. +..||||++.... .......+.+|+.+++.++||||+++++++
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 55677789999999999999999999865 4679999987543 344556788999999999999999999999
Q ss_pred ecCCceeEEEeecCCCCHHHHHhhcC---------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC
Q 003978 572 TSPQRLCIVTEFLPRGSLFRLLQRNT---------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW 642 (782)
Q Consensus 572 ~~~~~~~lv~E~~~ggsL~~~l~~~~---------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~ 642 (782)
...+..|+||||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~NIli~~~~ 175 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDF 175 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCSGGGEEECTTC
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC--CccCCCccceEEEcCCC
Confidence 99999999999999999999996532 34688999999999999999999999 99999999999999999
Q ss_pred cEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhc
Q 003978 643 TVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGF 719 (782)
Q Consensus 643 ~vkL~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~ 719 (782)
.+||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|+|++ |..||...........+.
T Consensus 176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~- 254 (322)
T 1p4o_A 176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM- 254 (322)
T ss_dssp CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH-
T ss_pred eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHH-
Confidence 99999999997554332 22234467899999999999999999999999999999999 899999888777665553
Q ss_pred cccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcCCC
Q 003978 720 MNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVGD 776 (782)
Q Consensus 720 ~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~~~ 776 (782)
.......+..++..+.+||.+||..||.+|||+.++++.|+++..++|+.......+
T Consensus 255 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~~~~~~~~~ 311 (322)
T 1p4o_A 255 EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSE 311 (322)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHHHCSTTST
T ss_pred cCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCCccccccccc
Confidence 233455677899999999999999999999999999999999988888776655443
No 85
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.7e-42 Score=366.67 Aligned_cols=256 Identities=35% Similarity=0.638 Sum_probs=216.9
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCH--HHH---HHHHHHHHHHHhCCCCceeEEeeeeecC
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSD--EVI---HSFRQEVSLMKRLRHPNVLLFMGAVTSP 574 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~--~~~---~~~~~Ei~il~~l~HpnIv~l~~~~~~~ 574 (782)
...++|++.+.||+|+||.||+|.+ .++.||||++....... ... +.+.+|+.+++.++||||+++++++...
T Consensus 16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 95 (287)
T 4f0f_A 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP 95 (287)
T ss_dssp CCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT
T ss_pred hhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC
Confidence 3447899999999999999999998 57789999987654322 211 6788999999999999999999998765
Q ss_pred CceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc-----EEEEec
Q 003978 575 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT-----VKVGDF 649 (782)
Q Consensus 575 ~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~-----vkL~DF 649 (782)
. ++||||+++++|.+++......+++..++.++.||+.||.|||+++.+|+|+||||+||||+.++. +||+||
T Consensus 96 ~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 96 P--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp T--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred C--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 4 799999999999999987777899999999999999999999998766999999999999988776 999999
Q ss_pred CCCcccccccccccCCCCCCcccCccccc--CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHH--HHHhhccccccC
Q 003978 650 GLSRLKHETYLTTKTGKGTPQWMAPEVLR--NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQV--IGAVGFMNQRLE 725 (782)
Q Consensus 650 Gla~~~~~~~~~~~~~~Gt~~y~aPE~l~--~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~--~~~i~~~~~~~~ 725 (782)
|+++..... .....||+.|+|||++. +..++.++|||||||++|+|++|..||........ ...+........
T Consensus 174 g~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 250 (287)
T 4f0f_A 174 GLSQQSVHS---VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPT 250 (287)
T ss_dssp TTCBCCSSC---EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCC
T ss_pred Ccccccccc---ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCC
Confidence 999754432 23457999999999984 45568899999999999999999999987654433 333434445667
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 726 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 726 ~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
++..+++++.+||.+||..||.+|||+.++++.|++|
T Consensus 251 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 251 IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred CCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 7889999999999999999999999999999998753
No 86
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-42 Score=383.24 Aligned_cols=262 Identities=26% Similarity=0.465 Sum_probs=225.1
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEc-------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWY-------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS 573 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~-------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~ 573 (782)
++..++|+++++||+|+||.||+|.+. +..||||+++... .......+.+|+.+++.++|||||++++++..
T Consensus 67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~ 145 (367)
T 3l9p_A 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 145 (367)
T ss_dssp BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc-ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec
Confidence 455689999999999999999999853 3469999986433 44555678899999999999999999999999
Q ss_pred CCceeEEEeecCCCCHHHHHhhcC------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC---cE
Q 003978 574 PQRLCIVTEFLPRGSLFRLLQRNT------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW---TV 644 (782)
Q Consensus 574 ~~~~~lv~E~~~ggsL~~~l~~~~------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~---~v 644 (782)
....|+|||||++++|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++ .+
T Consensus 146 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~~~~ 223 (367)
T 3l9p_A 146 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVA 223 (367)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESCSSTTCCE
T ss_pred CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChhhEEEecCCCCceE
Confidence 999999999999999999997643 35899999999999999999999999 99999999999999555 59
Q ss_pred EEEecCCCcccccc--cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccc
Q 003978 645 KVGDFGLSRLKHET--YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMN 721 (782)
Q Consensus 645 kL~DFGla~~~~~~--~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~ 721 (782)
||+|||+++..... ........||+.|+|||++.+..++.++|||||||++|+|++ |..||...........+. ..
T Consensus 224 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~-~~ 302 (367)
T 3l9p_A 224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT-SG 302 (367)
T ss_dssp EECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH-TT
T ss_pred EECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cC
Confidence 99999999754322 122234467999999999999999999999999999999998 999999988877776654 33
Q ss_pred cccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 722 QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 722 ~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
.....+..++..+.+||.+||..||.+|||+.+++++|+.+....
T Consensus 303 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 303 GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 355667889999999999999999999999999999999887654
No 87
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.9e-42 Score=383.78 Aligned_cols=264 Identities=30% Similarity=0.526 Sum_probs=218.2
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEc-----CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWY-----GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS 573 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~-----~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~ 573 (782)
..++...+|++.+.||+|+||.||+|.+. +..||||+++... .....+.+.+|+.+++.++||||+++++++..
T Consensus 39 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 117 (373)
T 2qol_A 39 AKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117 (373)
T ss_dssp SCBCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred HhhcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee
Confidence 34566679999999999999999999864 5569999986543 45566789999999999999999999999999
Q ss_pred CCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCc
Q 003978 574 PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 653 (782)
Q Consensus 574 ~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~ 653 (782)
...+|+|||||++++|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++
T Consensus 118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 195 (373)
T 2qol_A 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLGR 195 (373)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECCC----
T ss_pred CCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCcceEEEcCCCCEEECcCcccc
Confidence 99999999999999999999877777999999999999999999999998 9999999999999999999999999998
Q ss_pred ccccccc---cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCC
Q 003978 654 LKHETYL---TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKD 729 (782)
Q Consensus 654 ~~~~~~~---~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~ 729 (782)
....... ......+++.|+|||++.+..++.++|||||||++|||++ |..||...........+.. ......+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~-~~~~~~~~~ 274 (373)
T 2qol_A 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE-GYRLPPPMD 274 (373)
T ss_dssp ------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHT-TEECCCCTT
T ss_pred ccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCCCCcc
Confidence 6544321 1223346788999999999999999999999999999998 9999998887776665532 334556678
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 730 VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 730 ~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
++..+.+||.+||..||.+||++.++++.|+++....
T Consensus 275 ~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp CBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred ccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 9999999999999999999999999999999987644
No 88
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.5e-42 Score=375.24 Aligned_cols=266 Identities=29% Similarity=0.468 Sum_probs=210.7
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEcCC-----eEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYGS-----DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS 573 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~-----~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~ 573 (782)
...+..++|++++.||+|+||.||+|.+... .||||+++.........+.+.+|+++++.++||||+++++++..
T Consensus 17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 96 (323)
T 3qup_A 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR 96 (323)
T ss_dssp TTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEEC
T ss_pred hcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeec
Confidence 4456678999999999999999999986432 69999998765555667889999999999999999999999987
Q ss_pred CCce------eEEEeecCCCCHHHHHhhcC-----CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC
Q 003978 574 PQRL------CIVTEFLPRGSLFRLLQRNT-----TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW 642 (782)
Q Consensus 574 ~~~~------~lv~E~~~ggsL~~~l~~~~-----~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~ 642 (782)
.... ++||||+.+++|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++
T Consensus 97 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~--ivH~Dikp~NIli~~~~ 174 (323)
T 3qup_A 97 SRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN--FIHRDLAARNCMLAEDM 174 (323)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTS
T ss_pred cccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC--cccCCCCcceEEEcCCC
Confidence 7655 99999999999999996432 25899999999999999999999999 99999999999999999
Q ss_pred cEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhc
Q 003978 643 TVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGF 719 (782)
Q Consensus 643 ~vkL~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~ 719 (782)
.+||+|||+++...... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||...........+.
T Consensus 175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~- 253 (323)
T 3qup_A 175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLI- 253 (323)
T ss_dssp CEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-
T ss_pred CEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHh-
Confidence 99999999997654322 12223457889999999999999999999999999999999 999999888776665553
Q ss_pred cccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH-HHh
Q 003978 720 MNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR-QYF 767 (782)
Q Consensus 720 ~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~-~~~ 767 (782)
.......+..+++++.+||.+||..||.+|||+.++++.|+++.. +|+
T Consensus 254 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~ 302 (323)
T 3qup_A 254 GGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSV 302 (323)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred cCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhh
Confidence 233556778899999999999999999999999999999999955 444
No 89
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4.4e-42 Score=372.72 Aligned_cols=254 Identities=27% Similarity=0.409 Sum_probs=219.9
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEee
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEF 583 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~ 583 (782)
.|...++||+|+||.||+|.. .++.||||++...... ..+.+.+|+.+++.++||||+++++++......|+||||
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 123 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ--RRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEF 123 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC--SHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchh--HHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEec
Confidence 478888999999999999998 4788999999765432 235678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccccc
Q 003978 584 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTK 663 (782)
Q Consensus 584 ~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 663 (782)
+++++|.+++.. ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++...........
T Consensus 124 ~~~~~L~~~l~~--~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 199 (321)
T 2c30_A 124 LQGGALTDIVSQ--VRLNEEQIATVCEAVLQALAYLHAQG--VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK 199 (321)
T ss_dssp CCSCBHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred CCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccc
Confidence 999999999875 35899999999999999999999998 99999999999999999999999999986655443445
Q ss_pred CCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-ccCCCCCCCHHHHHHHHHhh
Q 003978 664 TGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-RLEIPKDVDPRWAAIVESCW 742 (782)
Q Consensus 664 ~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~-~~~~p~~~~~~l~~LI~~cL 742 (782)
...||+.|+|||++.+..++.++|||||||++|+|++|..||...........+..... ....+..+++.+.+||.+||
T Consensus 200 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 279 (321)
T 2c30_A 200 SLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERML 279 (321)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHS
T ss_pred cccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHc
Confidence 66899999999999999999999999999999999999999998877766655533221 22233468899999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 743 HSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 743 ~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
..||.+|||+.++ +.|+||+...
T Consensus 280 ~~dp~~Rps~~el------l~hp~~~~~~ 302 (321)
T 2c30_A 280 VRDPQERATAQEL------LDHPFLLQTG 302 (321)
T ss_dssp CSSTTTSCCHHHH------HTSGGGGGCC
T ss_pred cCChhhCcCHHHH------hcChhhccCC
Confidence 9999999999999 6689997653
No 90
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.3e-42 Score=378.69 Aligned_cols=268 Identities=25% Similarity=0.387 Sum_probs=217.1
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHH-HHhCCCCceeEEeeeeecC
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSL-MKRLRHPNVLLFMGAVTSP 574 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~i-l~~l~HpnIv~l~~~~~~~ 574 (782)
..+++..++|++++.||+|+||.||+|.+ .++.||||++......... ..+..|+.+ ++.++||||+++++++..+
T Consensus 44 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-~~~~~e~~~~~~~~~h~~iv~~~~~~~~~ 122 (340)
T 3an0_A 44 QNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQ-KRLLMDLDISMRTVDCPFTVTFYGALFRE 122 (340)
T ss_dssp CCCCCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHH-HHHHHHHHHHHTTCCCTTTCCEEEEEECS
T ss_pred cceEEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHH-HHHHHHHHHHHhhcCCCcEEEEeeEEEeC
Confidence 34567778999999999999999999998 5778999999766544443 344445554 7788999999999999999
Q ss_pred CceeEEEeecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHhhhcC-CCCeeecCCCCCcEEEcCCCcEEEEecC
Q 003978 575 QRLCIVTEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHC-NPPIIHRDLKSSNLLVDKHWTVKVGDFG 650 (782)
Q Consensus 575 ~~~~lv~E~~~ggsL~~~l~~---~~~~l~~~~~~~i~~qll~aL~~LH~~-~~~ivHrDIKp~NILl~~~~~vkL~DFG 650 (782)
+.+|+|||||++ +|.+++.. ....+++..++.++.||+.||.|||++ + |+||||||+||||+.++.+||+|||
T Consensus 123 ~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg 199 (340)
T 3an0_A 123 GDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFG 199 (340)
T ss_dssp SCEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC--CCCCSCCSTTEEECSTTCEEECCCS
T ss_pred CcEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC--eecCCCCHHHEEECCCCCEEEeeCC
Confidence 999999999975 99888864 456799999999999999999999986 8 9999999999999999999999999
Q ss_pred CCcccccccccccCCCCCCcccCcccccC----CCCCchhHHHHHHHHHHHHHcCCCCCCCCC-hHHHHHHhhccccccC
Q 003978 651 LSRLKHETYLTTKTGKGTPQWMAPEVLRN----EPSDEKSDVYSFGVILWELATEKIPWDNLN-SMQVIGAVGFMNQRLE 725 (782)
Q Consensus 651 la~~~~~~~~~~~~~~Gt~~y~aPE~l~~----~~~s~~sDIwSLG~ll~elltG~~Pf~~~~-~~~~~~~i~~~~~~~~ 725 (782)
+++....... .....||+.|+|||++.+ ..++.++|||||||++|+|++|..||.... ....+..+........
T Consensus 200 ~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 278 (340)
T 3an0_A 200 ISGYLVDSVA-KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL 278 (340)
T ss_dssp HHHHHSCHHH-HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCC
T ss_pred Cceecccccc-cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCCC
Confidence 9876544322 223479999999999754 468899999999999999999999998643 3333333322222222
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcCCC
Q 003978 726 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVGD 776 (782)
Q Consensus 726 ~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~~~ 776 (782)
.+..++.++.+||.+||..||.+||++.++ +.|+||+...+.-.+
T Consensus 279 ~~~~~~~~~~~li~~~l~~dp~~Rps~~el------l~hp~f~~~~~~~~~ 323 (340)
T 3an0_A 279 PADKFSAEFVDFTSQCLKKNSKERPTYPEL------MQHPFFTLHESKGTD 323 (340)
T ss_dssp CGGGSCHHHHHHHHHHTCSSGGGSCCHHHH------TTSHHHHHHTTSCCC
T ss_pred CcccCCHHHHHHHHHHccCCcccCcCHHHH------hcCcCcccccccccC
Confidence 234589999999999999999999999999 678999876655443
No 91
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=8.8e-43 Score=378.67 Aligned_cols=258 Identities=25% Similarity=0.383 Sum_probs=213.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
.++|++++.||+|+||.||+|.+. ++.||||++..... ....+.+.+|+.+++.++|||||++++++...+..|+||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 84 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc-cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 478999999999999999999884 77899999975543 223466889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc--c
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET--Y 659 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~--~ 659 (782)
|||++++|.+++... ..+++..++.++.||+.||.|||++| |+||||||+||||+.++.+||+|||+++..... .
T Consensus 85 e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 85 EYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp ECCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred EcCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 999999999999754 46899999999999999999999999 999999999999999999999999999754322 1
Q ss_pred ccccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhhccccccCCCCCCCHHHHHH
Q 003978 660 LTTKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAVGFMNQRLEIPKDVDPRWAAI 737 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~~~~~-s~~sDIwSLG~ll~elltG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~~l~~L 737 (782)
.......||+.|+|||++.+..+ +.++|||||||++|+|++|..||...... ..................+++.+.+|
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 241 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHH
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHH
Confidence 22335679999999999988775 77899999999999999999999866543 22222222222223335689999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 738 VESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 738 I~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
|.+||..||.+|||+.++ ++|+||+...
T Consensus 242 i~~~L~~dP~~R~t~~ei------l~h~~~~~~~ 269 (323)
T 3tki_A 242 LHKILVENPSARITIPDI------KKDRWYNKPL 269 (323)
T ss_dssp HHHHSCSSTTTSCCHHHH------TTCTTTTCCC
T ss_pred HHHHccCChhhCcCHHHH------hhChhhcccc
Confidence 999999999999999999 6789997543
No 92
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.8e-43 Score=379.28 Aligned_cols=263 Identities=22% Similarity=0.330 Sum_probs=213.1
Q ss_pred cceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEe
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E 582 (782)
++|+++++||+|+||.||+|.+. ++.||||++..... ......+.+|+.+++.++||||+++++++...+.+|+|||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc-cccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 68999999999999999999984 67899999865432 1112234579999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccc
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTT 662 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 662 (782)
||+ ++|.+++......+++..++.++.||+.||.|||++| |+||||||+||||+.++.+||+|||+++.........
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 157 (324)
T 3mtl_A 81 YLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK--VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY 157 (324)
T ss_dssp CCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT--EEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred ccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc
Confidence 996 5999999887778999999999999999999999999 9999999999999999999999999998665444444
Q ss_pred cCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc-----------------
Q 003978 663 KTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL----------------- 724 (782)
Q Consensus 663 ~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~----------------- 724 (782)
....||+.|+|||++.+ ..++.++|||||||++|+|++|..||...+.......+......+
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (324)
T 3mtl_A 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTY 237 (324)
T ss_dssp -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHT
T ss_pred ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccc
Confidence 45678999999999987 567999999999999999999999999888776655543211110
Q ss_pred -----------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcCCCC
Q 003978 725 -----------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVGDS 777 (782)
Q Consensus 725 -----------~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~~~~ 777 (782)
...+.+++++.+||.+||..||.+|||+.++ |+|+||+.........
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~------l~hp~f~~~~~~~~~~ 295 (324)
T 3mtl_A 238 NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDA------MKHPFFLSLGERIHKL 295 (324)
T ss_dssp CCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHH------TTSGGGGGGCSTTSSS
T ss_pred ccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHH------hcChhhhhcccccccC
Confidence 1123578999999999999999999999999 6789998776655443
No 93
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=3e-42 Score=384.11 Aligned_cols=259 Identities=21% Similarity=0.377 Sum_probs=223.1
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
...++|++++.||+|+||.||+|.+. ++.||+|++.... ......+.+|+.+|+.++|||||++++++.....+|+
T Consensus 48 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 125 (387)
T 1kob_A 48 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL 125 (387)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEE
T ss_pred ccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc--hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEE
Confidence 34578999999999999999999984 6779999987543 2334578899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC--CCcEEEEecCCCccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK--HWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~--~~~vkL~DFGla~~~~~ 657 (782)
|||||.+++|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+. .+.+||+|||+++....
T Consensus 126 v~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 126 ILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS--IVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203 (387)
T ss_dssp EEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred EEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccchHHeEEecCCCCceEEEecccceecCC
Confidence 99999999999999876667999999999999999999999999 999999999999974 57899999999986544
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc--ccCCCCCCCHHHH
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ--RLEIPKDVDPRWA 735 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~--~~~~p~~~~~~l~ 735 (782)
... .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+..... .......+++++.
T Consensus 204 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 282 (387)
T 1kob_A 204 DEI-VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAK 282 (387)
T ss_dssp TSC-EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHH
T ss_pred Ccc-eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHH
Confidence 322 2234789999999999999999999999999999999999999998887776666543322 2233457899999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
+||.+||..||.+|||+.++ |.|+||+...
T Consensus 283 ~li~~~L~~dP~~Rpt~~el------l~hp~~~~~~ 312 (387)
T 1kob_A 283 DFIKNLLQKEPRKRLTVHDA------LEHPWLKGDH 312 (387)
T ss_dssp HHHHTTSCSSGGGSCCHHHH------HTSTTTSSCC
T ss_pred HHHHHHcCCChhHCcCHHHH------hhCccccCCc
Confidence 99999999999999999999 5678887543
No 94
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=4.5e-42 Score=379.08 Aligned_cols=256 Identities=27% Similarity=0.410 Sum_probs=204.6
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
...++|++++.||+|+||.||++.+ .++.||||++....... ..+.+|+.+++.++|||||++++++.....+|+
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 93 (361)
T 3uc3_A 17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID---ENVQREIINHRSLRHPNIVRFKEVILTPTHLAI 93 (361)
T ss_dssp CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSC---HHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcccc---HHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEE
Confidence 3456899999999999999999998 47789999997654333 457789999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc--EEEEecCCCccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT--VKVGDFGLSRLKHE 657 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~--vkL~DFGla~~~~~ 657 (782)
|||||.+++|.+++.... .+++..++.++.||+.||.|||++| |+||||||+||||+.++. +||+|||+++....
T Consensus 94 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH~~~--ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 94 IMEYASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCHSMQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT--CCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred EEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 999999999999997643 6999999999999999999999999 999999999999987765 99999999974332
Q ss_pred ccccccCCCCCCcccCcccccCCCCCch-hHHHHHHHHHHHHHcCCCCCCCCCh----HHHHHHhhccccccCCCCCCCH
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNEPSDEK-SDVYSFGVILWELATEKIPWDNLNS----MQVIGAVGFMNQRLEIPKDVDP 732 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~~~s~~-sDIwSLG~ll~elltG~~Pf~~~~~----~~~~~~i~~~~~~~~~p~~~~~ 732 (782)
.. ......||+.|+|||++.+..++.+ +|||||||++|+|++|..||..... ......+............+++
T Consensus 171 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 249 (361)
T 3uc3_A 171 HS-QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISP 249 (361)
T ss_dssp -----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCH
T ss_pred cC-CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCH
Confidence 22 2234579999999999988887655 8999999999999999999986543 2333333222223333346899
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 733 RWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 733 ~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
++.+||.+||..||.+|||+.++ +.|+||+..
T Consensus 250 ~~~~li~~~L~~dP~~Rps~~el------l~hp~f~~~ 281 (361)
T 3uc3_A 250 ECCHLISRIFVADPATRISIPEI------KTHSWFLKN 281 (361)
T ss_dssp HHHHHHHHHSCSCTTTSCCHHHH------HTSHHHHTT
T ss_pred HHHHHHHHHccCChhHCcCHHHH------HhCcchhcC
Confidence 99999999999999999999999 678999554
No 95
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=6.2e-42 Score=364.75 Aligned_cols=262 Identities=31% Similarity=0.501 Sum_probs=220.6
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec---
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS--- 573 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--- 573 (782)
........|++.+.||+|+||.||+|.+. +..||+|++..........+.+.+|+.+++.++||||+++++++..
T Consensus 20 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 99 (290)
T 1t4h_A 20 GMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK 99 (290)
T ss_dssp EECTTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESS
T ss_pred hcccCceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccC
Confidence 33445567999999999999999999984 5679999998877777778899999999999999999999998864
Q ss_pred -CCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc-CCCcEEEEecCC
Q 003978 574 -PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD-KHWTVKVGDFGL 651 (782)
Q Consensus 574 -~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~-~~~~vkL~DFGl 651 (782)
...+|+||||+++++|.+++... ..+++..++.++.||+.||.|||+++.+|+|+||||+||||+ .++.+||+|||+
T Consensus 100 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 100 GKKCIVLVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp SCEEEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred CCceEEEEEEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 35589999999999999999764 468999999999999999999999776699999999999997 789999999999
Q ss_pred CcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhhccccccCCCCCC
Q 003978 652 SRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAVGFMNQRLEIPKDV 730 (782)
Q Consensus 652 a~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~ 730 (782)
+....... .....||+.|+|||++.+. ++.++|||||||++|+|++|..||...... .....+........++..+
T Consensus 179 ~~~~~~~~--~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (290)
T 1t4h_A 179 ATLKRASF--AKAVIGTPEFMAPEMYEEK-YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVA 255 (290)
T ss_dssp GGGCCTTS--BEESCSSCCCCCGGGGGTC-CCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCC
T ss_pred cccccccc--cccccCCcCcCCHHHHhcc-CCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCC
Confidence 97554432 2345789999999998754 889999999999999999999999875544 3333443333344556678
Q ss_pred CHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 731 DPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 731 ~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
++++.+||.+||..||.+|||+.++ +.|+||+..
T Consensus 256 ~~~l~~li~~~l~~dp~~Rps~~el------l~h~~f~~~ 289 (290)
T 1t4h_A 256 IPEVKEIIEGCIRQNKDERYSIKDL------LNHAFFQEE 289 (290)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHH------HTSGGGC--
T ss_pred CHHHHHHHHHHccCChhhCCCHHHH------hhCcccccC
Confidence 8999999999999999999999999 678999753
No 96
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=3.1e-42 Score=370.74 Aligned_cols=268 Identities=29% Similarity=0.510 Sum_probs=226.1
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEc-------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEee
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWY-------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMG 569 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~-------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~ 569 (782)
..++...++|++++.||+|+||.||+|.+. ++.||||+++... .......+.+|+.+++.+ +||||+++++
T Consensus 20 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 98 (316)
T 2xir_A 20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLG 98 (316)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC-CcHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence 456677889999999999999999999863 3569999997543 445567889999999999 6999999999
Q ss_pred eeecCC-ceeEEEeecCCCCHHHHHhhcCCc---------------chHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 003978 570 AVTSPQ-RLCIVTEFLPRGSLFRLLQRNTTK---------------LDWRRRILMALDIARGVSYLHHCNPPIIHRDLKS 633 (782)
Q Consensus 570 ~~~~~~-~~~lv~E~~~ggsL~~~l~~~~~~---------------l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp 633 (782)
++...+ .+|+|||||++++|.+++...... +++..++.++.||+.||.|||+++ |+||||||
T Consensus 99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dikp 176 (316)
T 2xir_A 99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAA 176 (316)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSG
T ss_pred EEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC--cccccCcc
Confidence 987654 589999999999999999765432 899999999999999999999998 99999999
Q ss_pred CcEEEcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 003978 634 SNLLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNS 710 (782)
Q Consensus 634 ~NILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~ 710 (782)
+||||+.++.+||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|+|++ |..||.....
T Consensus 177 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~ 256 (316)
T 2xir_A 177 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 256 (316)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC
T ss_pred ceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccch
Confidence 99999999999999999997654322 22233457889999999999999999999999999999998 9999987765
Q ss_pred HHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003978 711 MQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 768 (782)
Q Consensus 711 ~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~ 768 (782)
................+..+++++.++|.+||..||.+|||+.+++++|+++.+...+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 314 (316)
T 2xir_A 257 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 314 (316)
T ss_dssp SHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred hHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcc
Confidence 4433333333445667788999999999999999999999999999999999876543
No 97
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.6e-42 Score=376.11 Aligned_cols=260 Identities=30% Similarity=0.443 Sum_probs=210.5
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc--
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR-- 576 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~-- 576 (782)
++....++|+++++||+|+||.||+|.+.++.||||++.... .......+|+.+++.++|||||++++++.....
T Consensus 18 n~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 94 (322)
T 3soc_A 18 NLYFQSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQD---KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVD 94 (322)
T ss_dssp CEEETTEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSS
T ss_pred ccccchhhchhhheecccCceEEEEEEECCCEEEEEEeecCc---hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCC
Confidence 344566799999999999999999999999999999996543 233455668999999999999999999987543
Q ss_pred --eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcC----------CCCeeecCCCCCcEEEcCCCcE
Q 003978 577 --LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC----------NPPIIHRDLKSSNLLVDKHWTV 644 (782)
Q Consensus 577 --~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~----------~~~ivHrDIKp~NILl~~~~~v 644 (782)
+|+|||||++++|.+++... .+++..++.++.||+.||.|||+. + |+||||||+||||+.++.+
T Consensus 95 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~--ivH~Dlkp~Nill~~~~~~ 170 (322)
T 3soc_A 95 VDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA--ISHRDIKSKNVLLKNNLTA 170 (322)
T ss_dssp EEEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE--EECSCCSGGGEEECTTCCE
T ss_pred ceEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC--EEeCCCChHhEEECCCCeE
Confidence 69999999999999999764 489999999999999999999998 8 9999999999999999999
Q ss_pred EEEecCCCcccccccc--cccCCCCCCcccCcccccCC-----CCCchhHHHHHHHHHHHHHcCCCCCCCCCh-------
Q 003978 645 KVGDFGLSRLKHETYL--TTKTGKGTPQWMAPEVLRNE-----PSDEKSDVYSFGVILWELATEKIPWDNLNS------- 710 (782)
Q Consensus 645 kL~DFGla~~~~~~~~--~~~~~~Gt~~y~aPE~l~~~-----~~s~~sDIwSLG~ll~elltG~~Pf~~~~~------- 710 (782)
||+|||+++....... ......||+.|+|||++.+. .++.++|||||||++|+|++|..||.....
T Consensus 171 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~ 250 (322)
T 3soc_A 171 CIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFE 250 (322)
T ss_dssp EECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTH
T ss_pred EEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchh
Confidence 9999999976543322 23345799999999999874 345688999999999999999999965321
Q ss_pred ---------HHHHHHhhccccccCCCC-----CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003978 711 ---------MQVIGAVGFMNQRLEIPK-----DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 765 (782)
Q Consensus 711 ---------~~~~~~i~~~~~~~~~p~-----~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~ 765 (782)
......+......+.++. ..+.++.+||.+||..||.+|||+.++++.|++|+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 251 EEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 112222221222222222 1235699999999999999999999999999998753
No 98
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.3e-42 Score=375.80 Aligned_cols=267 Identities=27% Similarity=0.355 Sum_probs=219.8
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC---CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY---SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~---~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
....++|++++.||+|+||.||+|.+ .+..||||++..... .......+.+|+++++.++|||||++++++...+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 34567999999999999999999988 456799999976432 3345678899999999999999999999999999
Q ss_pred ceeEEEeecCCCCHHHHHhhc---------------------------------------CCcchHHHHHHHHHHHHHHH
Q 003978 576 RLCIVTEFLPRGSLFRLLQRN---------------------------------------TTKLDWRRRILMALDIARGV 616 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~---------------------------------------~~~l~~~~~~~i~~qll~aL 616 (782)
.+|+|||||++++|.+++... ...+++..++.++.||+.||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 999999999999999998521 22357888899999999999
Q ss_pred HhhhcCCCCeeecCCCCCcEEEcCCC--cEEEEecCCCccccccc----ccccCCCCCCcccCcccccC--CCCCchhHH
Q 003978 617 SYLHHCNPPIIHRDLKSSNLLVDKHW--TVKVGDFGLSRLKHETY----LTTKTGKGTPQWMAPEVLRN--EPSDEKSDV 688 (782)
Q Consensus 617 ~~LH~~~~~ivHrDIKp~NILl~~~~--~vkL~DFGla~~~~~~~----~~~~~~~Gt~~y~aPE~l~~--~~~s~~sDI 688 (782)
.|||+++ |+||||||+||||+.++ .+||+|||++....... .......||+.|+|||++.+ ..++.++||
T Consensus 182 ~~LH~~~--ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di 259 (345)
T 3hko_A 182 HYLHNQG--ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDA 259 (345)
T ss_dssp HHHHHTT--EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHH
T ss_pred HHHHHCC--ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHH
Confidence 9999998 99999999999998766 89999999997543321 12335579999999999975 678899999
Q ss_pred HHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC--CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 689 YSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP--KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 689 wSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p--~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
|||||++|+|++|..||...........+.........+ ..+++++.+||.+||..||.+||++.++ |+|+|
T Consensus 260 wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~------l~hp~ 333 (345)
T 3hko_A 260 WSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRA------LQHPW 333 (345)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHH------HHSHH
T ss_pred HHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHH------hcChh
Confidence 999999999999999999988877766664333222222 3489999999999999999999999999 67899
Q ss_pred hhcccCcCC
Q 003978 767 FQASRSTVG 775 (782)
Q Consensus 767 ~~~~~~~~~ 775 (782)
|+.....+.
T Consensus 334 ~~~~~~~~~ 342 (345)
T 3hko_A 334 ISQFSDKIY 342 (345)
T ss_dssp HHTTSSCSS
T ss_pred hccChHhhE
Confidence 988765543
No 99
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=8.6e-42 Score=364.35 Aligned_cols=259 Identities=27% Similarity=0.423 Sum_probs=228.0
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
...++|++++.||+|+||.||++.+. ++.||+|++..... .......+.+|+.+++.++||||+++++++...+.+|
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (294)
T 2rku_A 12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF 91 (294)
T ss_dssp TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEE
Confidence 44578999999999999999999985 66799999977654 4456678899999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
+||||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.+||+|||++......
T Consensus 92 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 92 VVLELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EEEECCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 999999999999998764 36899999999999999999999998 999999999999999999999999999866544
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 738 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI 738 (782)
........||+.|+|||++.+..++.++|||||||++|+|++|..||...........+. .....++..+++.+.+||
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li 246 (294)
T 2rku_A 169 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK--KNEYSIPKHINPVAASLI 246 (294)
T ss_dssp TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH--TTCCCCCTTSCHHHHHHH
T ss_pred ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh--hccCCCccccCHHHHHHH
Confidence 334445679999999999999989999999999999999999999999887766655543 334567788999999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 739 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 739 ~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
.+||..||.+|||+.++ +.|+||+...
T Consensus 247 ~~~l~~~p~~Rps~~~l------l~~~~~~~~~ 273 (294)
T 2rku_A 247 QKMLQTDPTARPTINEL------LNDEFFTSGY 273 (294)
T ss_dssp HHHTCSSGGGSCCGGGG------GGSHHHHTSC
T ss_pred HHHcccChhhCcCHHHH------hhChheecCC
Confidence 99999999999999999 6789997654
No 100
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=7.8e-42 Score=368.00 Aligned_cols=271 Identities=30% Similarity=0.483 Sum_probs=220.2
Q ss_pred CCCCccccccccccceeEeeeeccCCcEEEEEEEEcC-----CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeE
Q 003978 492 DLDNDCLDYEILWEDLTIGEQIGQGSCGTVYHAVWYG-----SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLL 566 (782)
Q Consensus 492 ~~~~~~~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~-----~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~ 566 (782)
++......+.+..++|++++.||+|+||.||+|.+.. ..||||+++...........+.+|+.+++.++||||++
T Consensus 21 el~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~ 100 (313)
T 3brb_A 21 ELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100 (313)
T ss_dssp ---CCTTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred hhhhhHHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeee
Confidence 3444455666778899999999999999999998743 36999999877667777788999999999999999999
Q ss_pred EeeeeecCC-----ceeEEEeecCCCCHHHHHhh-----cCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcE
Q 003978 567 FMGAVTSPQ-----RLCIVTEFLPRGSLFRLLQR-----NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNL 636 (782)
Q Consensus 567 l~~~~~~~~-----~~~lv~E~~~ggsL~~~l~~-----~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NI 636 (782)
+++++.... ..|+||||+.+++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+||
T Consensus 101 ~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dikp~NI 178 (313)
T 3brb_A 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN--FLHRDLAARNC 178 (313)
T ss_dssp CCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT--CCCCCCSGGGE
T ss_pred eeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceE
Confidence 999987654 35999999999999999943 2356899999999999999999999998 99999999999
Q ss_pred EEcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHH
Q 003978 637 LVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQV 713 (782)
Q Consensus 637 Ll~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~ 713 (782)
||+.++.+||+|||++....... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||........
T Consensus 179 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~ 258 (313)
T 3brb_A 179 MLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM 258 (313)
T ss_dssp EECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred EEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH
Confidence 99999999999999997654322 22233457889999999999999999999999999999999 9999998877666
Q ss_pred HHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003978 714 IGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 765 (782)
Q Consensus 714 ~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~ 765 (782)
...+. .......+..+++++.+||.+||..||.+|||+.++++.|+++...
T Consensus 259 ~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 259 YDYLL-HGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp HHHHH-TTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHH-cCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 55543 2335567788999999999999999999999999999999998764
No 101
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1e-42 Score=378.61 Aligned_cols=259 Identities=22% Similarity=0.308 Sum_probs=207.2
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
..++|+++++||+|+||.||+|.+ .++.||||+++...........+.+|+.+++.++||||+++++++.....+|+|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 346899999999999999999987 467899999977665555567788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc-----CCCcEEEEecCCCccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD-----KHWTVKVGDFGLSRLK 655 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~-----~~~~vkL~DFGla~~~ 655 (782)
||||+ ++|.+++.... .+++..++.++.||+.||.|||+++ |+||||||+||||+ .++.+||+|||+++..
T Consensus 112 ~e~~~-~~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~ 187 (329)
T 3gbz_A 112 FEYAE-NDLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCHSRR--CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187 (329)
T ss_dssp EECCS-EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred EecCC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCC--EECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence 99996 49999997654 5899999999999999999999999 99999999999994 4556999999999866
Q ss_pred ccccccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccC---------
Q 003978 656 HETYLTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE--------- 725 (782)
Q Consensus 656 ~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~--------- 725 (782)
...........||+.|+|||++.+. .++.++|||||||++|+|++|..||...........+......+.
T Consensus 188 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (329)
T 3gbz_A 188 GIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTA 267 (329)
T ss_dssp C-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred CCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhh
Confidence 5444444456789999999999874 479999999999999999999999998887766555432111100
Q ss_pred -------------------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 726 -------------------IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 726 -------------------~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
++..+++++.+||.+||..||.+|||+.++ |+|+||+...
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~------l~hp~f~~~~ 326 (329)
T 3gbz_A 268 LPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNA------LEHPYFSHND 326 (329)
T ss_dssp STTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHH------HTSGGGSSSC
T ss_pred hhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHH------hCCcccCCCC
Confidence 011268899999999999999999999999 6789998653
No 102
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.7e-42 Score=371.30 Aligned_cols=254 Identities=20% Similarity=0.224 Sum_probs=210.2
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCcee
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~ 578 (782)
...++|++.++||+|+||.||+|.+. ++.||||++...............|+..+..+ +||||+++++++...+.+|
T Consensus 54 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~ 133 (311)
T 3p1a_A 54 FFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILY 133 (311)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred hhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEE
Confidence 34578999999999999999999984 77899999876655554445555566655555 8999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
+||||| +++|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++......
T Consensus 134 lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~ 210 (311)
T 3p1a_A 134 LQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG--LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210 (311)
T ss_dssp EEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred EEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence 999999 77999999887778999999999999999999999998 999999999999999999999999998765443
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 738 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI 738 (782)
. ......||+.|+|||++.+ .++.++|||||||++|+|++|..||..... ...+........++..+++++.+||
T Consensus 211 ~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~li 285 (311)
T 3p1a_A 211 G-AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG---WQQLRQGYLPPEFTAGLSSELRSVL 285 (311)
T ss_dssp -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---HHHHTTTCCCHHHHTTSCHHHHHHH
T ss_pred C-CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH---HHHHhccCCCcccccCCCHHHHHHH
Confidence 2 2334579999999999987 689999999999999999999766654322 2223222223345567899999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 739 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 739 ~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
.+||..||++|||+.++ |.|+||++
T Consensus 286 ~~~L~~dP~~Rpt~~el------l~hp~~~~ 310 (311)
T 3p1a_A 286 VMMLEPDPKLRATAEAL------LALPVLRQ 310 (311)
T ss_dssp HHHSCSSTTTSCCHHHH------HTSGGGSC
T ss_pred HHHcCCChhhCcCHHHH------HhCccccC
Confidence 99999999999999999 67899975
No 103
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=5.9e-42 Score=376.32 Aligned_cols=255 Identities=31% Similarity=0.453 Sum_probs=221.1
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCC-HHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
.+.|++++.||+|+||.||+|.. .++.||||++...... ....+.+.+|+++++.++|||||++++++...+..|+|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 45799999999999999999997 5778999999866443 34567889999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 660 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 660 (782)
||||. |+|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++......
T Consensus 133 ~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-- 207 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 207 (348)
T ss_dssp EECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred EecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence 99996 6899988766678999999999999999999999999 999999999999999999999999999765432
Q ss_pred cccCCCCCCcccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHH
Q 003978 661 TTKTGKGTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 737 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~---~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~L 737 (782)
....||+.|+|||++. +..++.++|||||||++|+|++|..||...+.......+.........+..++..+.+|
T Consensus 208 --~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 285 (348)
T 1u5q_A 208 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNF 285 (348)
T ss_dssp --CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHH
T ss_pred --CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHH
Confidence 2457999999999985 56688999999999999999999999998887766655544433444556789999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 738 VESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 738 I~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
|.+||..||.+|||+.++ +.|+||...+
T Consensus 286 i~~~l~~dP~~Rps~~~l------l~h~~~~~~~ 313 (348)
T 1u5q_A 286 VDSCLQKIPQDRPTSEVL------LKHRFVLRER 313 (348)
T ss_dssp HHHHTCSSGGGSCCHHHH------TTCHHHHSCC
T ss_pred HHHHcccChhhCcCHHHH------hhChhhhccC
Confidence 999999999999999999 5678876544
No 104
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=4.4e-42 Score=390.81 Aligned_cols=259 Identities=25% Similarity=0.289 Sum_probs=198.4
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec-----CCc
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS-----PQR 576 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-----~~~ 576 (782)
.++|+++++||+|+||.||+|.+ .++.||||++..........+.+.+|+.+|+.++|||||++++++.. ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 47899999999999999999987 47789999997765566667889999999999999999999999843 356
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
+|+||||+ +++|.+++... ..+++..++.++.||+.||.|||+++ ||||||||+||||+.++.+||+|||+++...
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~--iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVHSAG--ILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred EEEEEecc-ccchhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhCC--cCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 89999999 56999999754 46999999999999999999999999 9999999999999999999999999998654
Q ss_pred ccc---------------------------ccccCCCCCCcccCcccc-cCCCCCchhHHHHHHHHHHHHHc--------
Q 003978 657 ETY---------------------------LTTKTGKGTPQWMAPEVL-RNEPSDEKSDVYSFGVILWELAT-------- 700 (782)
Q Consensus 657 ~~~---------------------------~~~~~~~Gt~~y~aPE~l-~~~~~s~~sDIwSLG~ll~ellt-------- 700 (782)
... ......+||+.|+|||++ .+..++.++|||||||+||||++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~ 287 (458)
T 3rp9_A 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAY 287 (458)
T ss_dssp SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSS
T ss_pred CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccc
Confidence 221 112345789999999986 56678999999999999999999
Q ss_pred ---CCCCCCCCChH--------------------HHHHHhhcc------------------------c-----cccCCCC
Q 003978 701 ---EKIPWDNLNSM--------------------QVIGAVGFM------------------------N-----QRLEIPK 728 (782)
Q Consensus 701 ---G~~Pf~~~~~~--------------------~~~~~i~~~------------------------~-----~~~~~p~ 728 (782)
|.++|.+.... ..+..+... . ......+
T Consensus 288 ~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (458)
T 3rp9_A 288 HADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFP 367 (458)
T ss_dssp GGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGST
T ss_pred cccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCC
Confidence 66777554311 111111000 0 0011234
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 729 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 729 ~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
.+++++.+||.+||..||.+|||+.++ |.|+||+....
T Consensus 368 ~~s~~~~dLl~~mL~~dP~~R~t~~e~------L~Hp~f~~~~~ 405 (458)
T 3rp9_A 368 ASSADAIHLLKRMLVFNPNKRITINEC------LAHPFFKEVRI 405 (458)
T ss_dssp TSCHHHHHHHHHHSCSSTTTSCCHHHH------HHSGGGTTTCC
T ss_pred CCCHHHHHHHHHHhccCccccCCHHHH------hcCHhhhhcCC
Confidence 568999999999999999999999999 67999987654
No 105
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-41 Score=370.23 Aligned_cols=265 Identities=31% Similarity=0.513 Sum_probs=223.0
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEcCC------eEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeee
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYGS------DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAV 571 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~------~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~ 571 (782)
+..++...+|++.+.||+|+||.||+|.+... .||||+++... .......+.+|+.+++.++||||+++++++
T Consensus 37 ~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 115 (333)
T 1mqb_A 37 FTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVI 115 (333)
T ss_dssp -CCBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred ccccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 34466778999999999999999999987432 49999987543 455567789999999999999999999999
Q ss_pred ecCCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCC
Q 003978 572 TSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGL 651 (782)
Q Consensus 572 ~~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGl 651 (782)
...+.+++||||+++++|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+
T Consensus 116 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~ 193 (333)
T 1mqb_A 116 SKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN--YVHRDLAARNILVNSNLVCKVSDFGL 193 (333)
T ss_dssp CSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECCCCC
T ss_pred ecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChheEEECCCCcEEECCCCc
Confidence 9999999999999999999999877677999999999999999999999999 99999999999999999999999999
Q ss_pred Ccccccccc---cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCC
Q 003978 652 SRLKHETYL---TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIP 727 (782)
Q Consensus 652 a~~~~~~~~---~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p 727 (782)
++....... ......+|+.|+|||++.+..++.++|||||||++|+|++ |..||...........+.. ......+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~-~~~~~~~ 272 (333)
T 1mqb_A 194 SRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIND-GFRLPTP 272 (333)
T ss_dssp -----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-TCCCCCC
T ss_pred chhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHC-CCcCCCc
Confidence 986543321 1223456889999999999999999999999999999999 9999998887776665542 2345567
Q ss_pred CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 728 KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 728 ~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
..++..+.+||.+||..||.+||++.++++.|+++....
T Consensus 273 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 273 MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 789999999999999999999999999999999887644
No 106
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.3e-41 Score=370.36 Aligned_cols=266 Identities=29% Similarity=0.555 Sum_probs=229.0
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEc---------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEE
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWY---------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLF 567 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~---------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l 567 (782)
..++...++|++++.||+|+||.||+|.+. +..||||+++... .......+.+|+.+++.+ +||||+++
T Consensus 28 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~ 106 (334)
T 2pvf_A 28 PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINL 106 (334)
T ss_dssp TTTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC-cHHHHHHHHHHHHHHHHhhcCCCEeeE
Confidence 345667789999999999999999999863 4569999987543 455567889999999999 89999999
Q ss_pred eeeeecCCceeEEEeecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCC
Q 003978 568 MGAVTSPQRLCIVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLK 632 (782)
Q Consensus 568 ~~~~~~~~~~~lv~E~~~ggsL~~~l~~~~---------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIK 632 (782)
++++...+.+|+||||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+|+|||
T Consensus 107 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlk 184 (334)
T 2pvf_A 107 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLA 184 (334)
T ss_dssp EEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCS
T ss_pred EEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCc
Confidence 999999999999999999999999997643 24889999999999999999999999 9999999
Q ss_pred CCcEEEcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCC
Q 003978 633 SSNLLVDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLN 709 (782)
Q Consensus 633 p~NILl~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~ 709 (782)
|+||||+.++.+||+|||+++...... .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||....
T Consensus 185 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 264 (334)
T 2pvf_A 185 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264 (334)
T ss_dssp GGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred cceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC
Confidence 999999999999999999997654432 22334467889999999998889999999999999999999 999999888
Q ss_pred hHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 710 SMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 710 ~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
.......+. .......+..++.++.+||.+||..||.+|||+.++++.|+++.....
T Consensus 265 ~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 265 VEELFKLLK-EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp HHHHHHHHH-HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHh-cCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 776665543 233456778899999999999999999999999999999999976543
No 107
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.6e-42 Score=394.21 Aligned_cols=257 Identities=27% Similarity=0.540 Sum_probs=224.5
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCH-HHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
...++|.+++.||+|+||.||+|.+. ++.||||++....... +....+.+|+.+|+.++||||+++++++.....+|
T Consensus 13 ~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~ 92 (476)
T 2y94_A 13 VKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIF 92 (476)
T ss_dssp CEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred ceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 45578999999999999999999984 7889999997643211 23467889999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
+|||||++++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++......
T Consensus 93 lv~E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 93 MVMEYVSGGELFDYICKN-GRLDEKESRRLFQQILSGVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp EEEECCSSEEHHHHTTSS-SSCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred EEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence 999999999999999764 46999999999999999999999998 999999999999999999999999999865443
Q ss_pred cccccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAI 737 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~-s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~L 737 (782)
. .....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...+.......+. ......|..+++++.+|
T Consensus 170 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~--~~~~~~p~~~s~~~~~L 246 (476)
T 2y94_A 170 E-FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKIC--DGIFYTPQYLNPSVISL 246 (476)
T ss_dssp C-CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHH--TTCCCCCTTCCHHHHHH
T ss_pred c-cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHh--cCCcCCCccCCHHHHHH
Confidence 2 2345689999999999998776 689999999999999999999999887777666653 33456677899999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 738 VESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 738 I~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
|.+||..||.+|||+.++ +.|+||+..
T Consensus 247 i~~~L~~dP~~Rpt~~ei------l~hp~~~~~ 273 (476)
T 2y94_A 247 LKHMLQVDPMKRATIKDI------REHEWFKQD 273 (476)
T ss_dssp HHHHTCSSTTTSCCHHHH------HTCHHHHTT
T ss_pred HHHHcCCCchhCcCHHHH------HhCHHhhhc
Confidence 999999999999999999 668999764
No 108
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=8.9e-42 Score=361.83 Aligned_cols=261 Identities=33% Similarity=0.568 Sum_probs=221.5
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEcCC-----eEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVWYGS-----DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP 574 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~-----~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~ 574 (782)
+.+..++|++.+.||+|+||.||+|.+.+. .||+|++.... .....+.+.+|+.+++.++||||+++++++..
T Consensus 7 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~- 84 (281)
T 3cc6_A 7 YGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE- 84 (281)
T ss_dssp CSCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-
T ss_pred ceecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-
Confidence 455668999999999999999999987432 39999987643 44556789999999999999999999999875
Q ss_pred CceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 575 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 575 ~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
+..|+||||+++++|.+++......+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.+||+|||++..
T Consensus 85 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 85 EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred CCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCccceEEECCCCcEEeCccCCCcc
Confidence 4678999999999999999877777999999999999999999999999 99999999999999999999999999976
Q ss_pred ccccc-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCH
Q 003978 655 KHETY-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDP 732 (782)
Q Consensus 655 ~~~~~-~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~ 732 (782)
..... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||...........+. .......+..+++
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 241 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE-KGDRLPKPDLCPP 241 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHH-HTCCCCCCTTCCH
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHh-cCCCCCCCCCCCH
Confidence 54432 12234467889999999999999999999999999999998 999998777666555443 2334556778999
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003978 733 RWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 765 (782)
Q Consensus 733 ~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~ 765 (782)
.+.+||.+||..||.+||++.++++.|+++...
T Consensus 242 ~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 242 VLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 999999999999999999999999999988653
No 109
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1e-41 Score=380.15 Aligned_cols=260 Identities=23% Similarity=0.384 Sum_probs=216.3
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc-CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC--CCceeEEeeeeecCCceeE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY-GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR--HPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~-~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~--HpnIv~l~~~~~~~~~~~l 579 (782)
...+|++++.||+|+||.||++... ++.||||++............+.+|+.+|+.+. |||||++++++..++.+|+
T Consensus 54 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~l 133 (390)
T 2zmd_A 54 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 133 (390)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEE
Confidence 3467999999999999999999874 677999999887777777888999999999996 5999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
|||+ .+++|.+++.... .+++..++.++.||+.||.|||+++ |+||||||+||||+ ++.+||+|||+++......
T Consensus 134 v~E~-~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~--ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 134 VMEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp EEEC-CSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTTT--CCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred EEec-CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 9995 5789999998754 6888899999999999999999998 99999999999995 5799999999998654322
Q ss_pred --ccccCCCCCCcccCcccccC-----------CCCCchhHHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHhhccccccC
Q 003978 660 --LTTKTGKGTPQWMAPEVLRN-----------EPSDEKSDVYSFGVILWELATEKIPWDNLNS-MQVIGAVGFMNQRLE 725 (782)
Q Consensus 660 --~~~~~~~Gt~~y~aPE~l~~-----------~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~-~~~~~~i~~~~~~~~ 725 (782)
......+||+.|+|||++.+ ..++.++|||||||+||+|++|..||..... ...+..+........
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~ 288 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 288 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCC
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCC
Confidence 12335579999999999976 3678899999999999999999999987543 334444433344556
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 726 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 726 ~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
++...+.++.+||.+||..||.+|||+.++ |.|+||+.....
T Consensus 289 ~~~~~~~~~~~li~~~L~~dP~~Rps~~el------l~hp~~~~~~~~ 330 (390)
T 2zmd_A 289 FPDIPEKDLQDVLKCCLKRDPKQRISIPEL------LAHPYVQIQTHP 330 (390)
T ss_dssp CCCCSCHHHHHHHHHHTCSSTTTSCCHHHH------HTSHHHHSCC--
T ss_pred CCccchHHHHHHHHHHcccChhhCCCHHHH------hhCcCccccCcc
Confidence 777789999999999999999999999999 678999765443
No 110
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.9e-42 Score=366.45 Aligned_cols=265 Identities=25% Similarity=0.355 Sum_probs=206.6
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
+++..++|++++.||+|+||.||++.+ .++.||||+++...........+.++..+++.++||||+++++++...+..
T Consensus 2 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~ 81 (290)
T 3fme_A 2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDV 81 (290)
T ss_dssp CCCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSE
T ss_pred CcccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCE
Confidence 356678999999999999999999998 677899999976654444455566666678888999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHhhhcC-CCCeeecCCCCCcEEEcCCCcEEEEecCCCc
Q 003978 578 CIVTEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHC-NPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 653 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~---~~~~l~~~~~~~i~~qll~aL~~LH~~-~~~ivHrDIKp~NILl~~~~~vkL~DFGla~ 653 (782)
|+||||++ ++|.+++.. ....+++..++.++.||+.||.|||++ + |+||||||+|||++.++.+||+|||++.
T Consensus 82 ~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T 3fme_A 82 WICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISG 158 (290)
T ss_dssp EEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC--CCCCCCSGGGCEECTTCCEEBCCC----
T ss_pred EEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC--eecCCCCHHHEEECCCCCEEEeecCCcc
Confidence 99999996 488887754 355799999999999999999999997 8 9999999999999999999999999997
Q ss_pred ccccccccccCCCCCCcccCcccc----cCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC-hHHHHHHhhccccccCCCC
Q 003978 654 LKHETYLTTKTGKGTPQWMAPEVL----RNEPSDEKSDVYSFGVILWELATEKIPWDNLN-SMQVIGAVGFMNQRLEIPK 728 (782)
Q Consensus 654 ~~~~~~~~~~~~~Gt~~y~aPE~l----~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~-~~~~~~~i~~~~~~~~~p~ 728 (782)
....... .....||+.|+|||++ .+..++.++|||||||++|+|++|..||.... .................+.
T Consensus 159 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (290)
T 3fme_A 159 YLVDDVA-KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD 237 (290)
T ss_dssp ------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTT
T ss_pred ccccccc-ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccc
Confidence 6544322 2344789999999996 56678899999999999999999999998643 3333333322222333345
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcC
Q 003978 729 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTV 774 (782)
Q Consensus 729 ~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~ 774 (782)
.+++++.+||.+||..||.+|||+.++ ++|+||+...+..
T Consensus 238 ~~~~~~~~li~~~l~~~p~~Rpt~~e~------l~hp~f~~~~~~~ 277 (290)
T 3fme_A 238 KFSAEFVDFTSQCLKKNSKERPTYPEL------MQHPFFTLHESKG 277 (290)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHH------TTSHHHHHHHHSC
T ss_pred cCCHHHHHHHHHHhhcChhhCcCHHHH------HhCcccccCcccc
Confidence 789999999999999999999999999 6789998765443
No 111
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=4.9e-42 Score=364.57 Aligned_cols=263 Identities=33% Similarity=0.579 Sum_probs=229.1
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
..|++..++|++.+.||+|+||.||+|.+. +..||||++..... ..+.+.+|+.+++.++||||+++++++....
T Consensus 6 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 82 (288)
T 3kfa_A 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82 (288)
T ss_dssp CTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCST---HHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHH---HHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 466778899999999999999999999985 67799999875432 3467889999999999999999999999999
Q ss_pred ceeEEEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
.+|+||||+++++|.+++... ...+++..++.++.||+.||.|||+++ |+|+||||+||+++.++.+||+|||++..
T Consensus 83 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~~l~Dfg~~~~ 160 (288)
T 3kfa_A 83 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLSRL 160 (288)
T ss_dssp SEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT--CCCSCCSGGGEEECGGGCEEECCCCGGGT
T ss_pred CEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC--ccCCCCCcceEEEcCCCCEEEccCcccee
Confidence 999999999999999999763 345899999999999999999999999 99999999999999999999999999986
Q ss_pred cccccc-cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCH
Q 003978 655 KHETYL-TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDP 732 (782)
Q Consensus 655 ~~~~~~-~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~ 732 (782)
...... ......+|+.|+|||++.+..++.++|||||||++|+|++ |..||...+.......+. .......+..+++
T Consensus 161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 239 (288)
T 3kfa_A 161 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEGCPE 239 (288)
T ss_dssp SCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH-TTCCCCCCTTCCH
T ss_pred ccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-ccCCCCCCCCCCH
Confidence 554322 2223356889999999999999999999999999999999 999999888776665553 2335566788999
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 733 RWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 733 ~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
.+.+||.+||..||.+|||+.++++.|+++..+.
T Consensus 240 ~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 240 KVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999886653
No 112
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1e-41 Score=364.70 Aligned_cols=259 Identities=29% Similarity=0.470 Sum_probs=215.4
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE------cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC-
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW------YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP- 574 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~------~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~- 574 (782)
...+.|+++++||+|+||.||+|.+ .++.||||++.... .......+.+|+.+++.++||||+++++++...
T Consensus 18 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 96 (302)
T 4e5w_A 18 FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDG 96 (302)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--
T ss_pred hhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC
Confidence 3346799999999999999999985 46779999987543 222346788999999999999999999999876
Q ss_pred -CceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCc
Q 003978 575 -QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 653 (782)
Q Consensus 575 -~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~ 653 (782)
..+++||||+++++|.+++......+++..++.++.||+.||+|||+++ |+|+||||+||||+.++.+||+|||++.
T Consensus 97 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 97 GNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp -CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred CceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCC--cccCCCchheEEEcCCCCEEECcccccc
Confidence 6689999999999999999777778999999999999999999999999 9999999999999999999999999998
Q ss_pred cccccc---ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC--------------hHHHHHH
Q 003978 654 LKHETY---LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN--------------SMQVIGA 716 (782)
Q Consensus 654 ~~~~~~---~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~--------------~~~~~~~ 716 (782)
...... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.... .......
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (302)
T 4e5w_A 175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVN 254 (302)
T ss_dssp ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHH
T ss_pred cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHH
Confidence 654432 22334568889999999999989999999999999999999998864321 1111112
Q ss_pred hhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003978 717 VGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 763 (782)
Q Consensus 717 i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~ 763 (782)
..........+..+++++.+||.+||..||.+|||+.++++.|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 255 TLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 22233455677889999999999999999999999999999999875
No 113
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.9e-41 Score=363.03 Aligned_cols=262 Identities=24% Similarity=0.399 Sum_probs=209.8
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
..++|++.+.||+|+||.||+|.. .++.||||++..... .......+.+|+.+++.++||||+++++++...+.+++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 456899999999999999999997 577899999976443 45667788999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 580 VTEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~---~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
||||+++++|.+++.. ....+++..++.++.||+.||.|||+++ |+|+||||+||||+.++.+||+|||++....
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 9999999999999864 3456899999999999999999999999 9999999999999999999999999987655
Q ss_pred cccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC--hHHHHHHhhccccccCCCCCCCHHH
Q 003978 657 ETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN--SMQVIGAVGFMNQRLEIPKDVDPRW 734 (782)
Q Consensus 657 ~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~--~~~~~~~i~~~~~~~~~p~~~~~~l 734 (782)
..........|++.|+|||++.+..++.++|||||||++|+|++|..||.... .......+.........+..++.++
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEEL 267 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHH
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHH
Confidence 44333345578999999999999999999999999999999999999997543 2333333332222333346789999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 735 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 735 ~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
.+||.+||..||.+|||+.++++.|++|+...
T Consensus 268 ~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 268 RQLVNMCINPDPEKRPDVTYVYDVAKRMHACT 299 (310)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999987654
No 114
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.3e-42 Score=382.35 Aligned_cols=259 Identities=21% Similarity=0.314 Sum_probs=207.3
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCC--c
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQ--R 576 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~--~ 576 (782)
...++|+++++||+|+||.||+|.+ .++.||||++............+.+|+.+|+.+. |||||++++++..++ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 3457999999999999999999987 4778999999766556666778889999999997 999999999997544 6
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
+|+|||||+ ++|..++... .+++..+..++.||+.||+|||++| |+||||||+||||+.++.+||+|||+++...
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSGG--LLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred EEEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 899999996 5999999763 5889999999999999999999999 9999999999999999999999999997543
Q ss_pred cc---------------------cccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 003978 657 ET---------------------YLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVI 714 (782)
Q Consensus 657 ~~---------------------~~~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~ 714 (782)
.. .......+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+....+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~ 240 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 21 111234579999999999987 67899999999999999999999999988876655
Q ss_pred HHhhcccccc---------------------------------------------CCCCCCCHHHHHHHHHhhhhCCCCC
Q 003978 715 GAVGFMNQRL---------------------------------------------EIPKDVDPRWAAIVESCWHSDPQCR 749 (782)
Q Consensus 715 ~~i~~~~~~~---------------------------------------------~~p~~~~~~l~~LI~~cL~~dP~~R 749 (782)
..+......+ ..+..+++++.+||.+||..||.+|
T Consensus 241 ~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R 320 (388)
T 3oz6_A 241 ERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKR 320 (388)
T ss_dssp HHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGS
T ss_pred HHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccC
Confidence 5542111100 1123678999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhhccc
Q 003978 750 PSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 750 Ps~~ell~~L~~L~~~~~~~~~ 771 (782)
||+.++ |.|+||+...
T Consensus 321 ~t~~e~------l~Hp~~~~~~ 336 (388)
T 3oz6_A 321 ISANDA------LKHPFVSIFH 336 (388)
T ss_dssp CCHHHH------TTSTTTTTTC
T ss_pred CCHHHH------hCCHHHHHhc
Confidence 999999 6789986543
No 115
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6.4e-42 Score=376.27 Aligned_cols=254 Identities=26% Similarity=0.404 Sum_probs=214.1
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-----CCceeEEeeeee
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-----HPNVLLFMGAVT 572 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-----HpnIv~l~~~~~ 572 (782)
.....++|+++++||+|+||.||+|.+ .++.||||+++. .......+..|+.+++.+. |||||++++++.
T Consensus 30 g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~ 106 (360)
T 3llt_A 30 GMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN---IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFM 106 (360)
T ss_dssp TCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEE
T ss_pred ceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc---chhhhhhhHHHHHHHHHhcccCCCCCCeecccceee
Confidence 345678999999999999999999998 577899999864 2344567788999999996 999999999999
Q ss_pred cCCceeEEEeecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC-----------
Q 003978 573 SPQRLCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK----------- 640 (782)
Q Consensus 573 ~~~~~~lv~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~----------- 640 (782)
..+.+|+||||+ +++|.+++.... ..+++..++.++.||+.||+|||+++ |+||||||+||||+.
T Consensus 107 ~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~~~~~~~~ 183 (360)
T 3llt_A 107 YYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS--LTHTDLKPENILLDDPYFEKSLITVR 183 (360)
T ss_dssp ETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCTTCCEEEEEEE
T ss_pred ECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCcccEEEccccccccccchh
Confidence 999999999999 889999997653 35899999999999999999999999 999999999999975
Q ss_pred --------------CCcEEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCC
Q 003978 641 --------------HWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWD 706 (782)
Q Consensus 641 --------------~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~ 706 (782)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus 184 ~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 260 (360)
T 3llt_A 184 RVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR 260 (360)
T ss_dssp CTTTCCEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred cccccccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCC
Confidence 789999999999764432 235578999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHhhcccccc------------------------CCC--------------------CCCCHHHHHHHHHhh
Q 003978 707 NLNSMQVIGAVGFMNQRL------------------------EIP--------------------KDVDPRWAAIVESCW 742 (782)
Q Consensus 707 ~~~~~~~~~~i~~~~~~~------------------------~~p--------------------~~~~~~l~~LI~~cL 742 (782)
..+.......+....... ..| ...++.+.+||.+||
T Consensus 261 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L 340 (360)
T 3llt_A 261 THEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSIL 340 (360)
T ss_dssp CSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHC
T ss_pred CCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHh
Confidence 887766555442211110 011 112477889999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003978 743 HSDPQCRPSFQELVDKLRDLQRQYFQ 768 (782)
Q Consensus 743 ~~dP~~RPs~~ell~~L~~L~~~~~~ 768 (782)
..||.+|||+.++ |+|+|||
T Consensus 341 ~~dP~~Rpta~el------L~hp~f~ 360 (360)
T 3llt_A 341 QIDPTLRPSPAEL------LKHKFLE 360 (360)
T ss_dssp CSSGGGSCCHHHH------TTSGGGC
T ss_pred cCChhhCCCHHHH------hcCcccC
Confidence 9999999999999 6788885
No 116
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.8e-42 Score=377.19 Aligned_cols=255 Identities=27% Similarity=0.380 Sum_probs=212.3
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC------
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ------ 575 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------ 575 (782)
.++|++++.||+|+||.||+|.+ .++.||||++..........+.+.+|+++|+.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 47899999999999999999997 4778999999776556666788999999999999999999999997653
Q ss_pred ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
.+|+||||+ +++|.+++.. ..+++..+..++.||+.||.|||++| |+||||||+||||+.++.+||+|||+++..
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHAAG--IIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred eEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 469999999 8899999976 35899999999999999999999999 999999999999999999999999999865
Q ss_pred ccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc------------
Q 003978 656 HETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ------------ 722 (782)
Q Consensus 656 ~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~------------ 722 (782)
... .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+....+..+.....
T Consensus 179 ~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~ 255 (367)
T 1cm8_A 179 DSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS 255 (367)
T ss_dssp CSS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSC
T ss_pred ccc---cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhh
Confidence 432 234578999999999987 6789999999999999999999999998877655544321110
Q ss_pred -----------------ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 723 -----------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 723 -----------------~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
...+...+++.+.+||.+||..||.+|||+.++ |.|+||+....
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~------l~hp~f~~~~~ 316 (367)
T 1cm8_A 256 DEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEA------LAHPYFESLHD 316 (367)
T ss_dssp HHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHH------HHSGGGTTTC-
T ss_pred HHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHH------hcChHHHhhcC
Confidence 112345679999999999999999999999999 67899987544
No 117
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=7.5e-42 Score=371.43 Aligned_cols=267 Identities=26% Similarity=0.485 Sum_probs=227.6
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEcC-------CeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeee
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYG-------SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGA 570 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~-------~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~ 570 (782)
.++...++|++.+.||+|+||.||+|.+.+ ..||+|++.... .......+.+|+.+++.+ +||||++++++
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 118 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGA 118 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence 466777899999999999999999999743 369999987543 345567889999999999 89999999999
Q ss_pred eecCCceeEEEeecCCCCHHHHHhhc-------------CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEE
Q 003978 571 VTSPQRLCIVTEFLPRGSLFRLLQRN-------------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLL 637 (782)
Q Consensus 571 ~~~~~~~~lv~E~~~ggsL~~~l~~~-------------~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NIL 637 (782)
+...+.+|+|||||++++|.+++... ...+++..++.++.||+.||.|||+++ |+||||||+|||
T Consensus 119 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~NIl 196 (333)
T 2i1m_A 119 CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVL 196 (333)
T ss_dssp ECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGCE
T ss_pred EecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC--cccCCcccceEE
Confidence 99999999999999999999999653 235789999999999999999999998 999999999999
Q ss_pred EcCCCcEEEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHH
Q 003978 638 VDKHWTVKVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVI 714 (782)
Q Consensus 638 l~~~~~vkL~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~ 714 (782)
|+.++.+||+|||++....... .......||+.|+|||++.+..++.++|||||||++|+|++ |..||.........
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~ 276 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF 276 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHH
T ss_pred ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHH
Confidence 9999999999999997554322 12233457889999999999999999999999999999998 99999877655544
Q ss_pred HHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003978 715 GAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 768 (782)
Q Consensus 715 ~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~ 768 (782)
..+.........+..+++.+.+||.+||..||.+|||+.++++.|+++..+.-+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 330 (333)
T 2i1m_A 277 YKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRR 330 (333)
T ss_dssp HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhhc
Confidence 444434445566778899999999999999999999999999999998776533
No 118
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=5.6e-42 Score=362.82 Aligned_cols=258 Identities=32% Similarity=0.605 Sum_probs=216.7
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec-CCce
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS-PQRL 577 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-~~~~ 577 (782)
.+.+..++|++.+.||+|+||.||++.+.++.||||+++... ..+.+.+|+.+++.++||||+++++++.. .+.+
T Consensus 15 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (278)
T 1byg_A 15 GWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL 90 (278)
T ss_dssp CCBCCGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CC
T ss_pred cccCChhhceEEeEEecCCCceEEEEEEcCCEEEEEEecchh----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCce
Confidence 455667899999999999999999999999999999987543 34678899999999999999999998654 4578
Q ss_pred eEEEeecCCCCHHHHHhhcCC-cchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTT-KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~-~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
|+||||+++++|.+++..... .+++..++.++.|++.||.|||+++ |+|+||||+||+++.++.+||+|||++....
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 168 (278)
T 1byg_A 91 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168 (278)
T ss_dssp EEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred EEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCcceEEEeCCCcEEEeecccccccc
Confidence 999999999999999976432 3788999999999999999999999 9999999999999999999999999987554
Q ss_pred cccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHHH
Q 003978 657 ETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWA 735 (782)
Q Consensus 657 ~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~ 735 (782)
... ....+++.|+|||++.+..++.++|||||||++|+|++ |..||...+.......+. .......+..+++.+.
T Consensus 169 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~ 244 (278)
T 1byg_A 169 STQ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGCPPAVY 244 (278)
T ss_dssp ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHT-TTCCCCCCTTCCHHHH
T ss_pred ccc---cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-cCCCCCCcccCCHHHH
Confidence 332 23467899999999999999999999999999999998 999999887766655553 2334567788999999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
+||.+||..||.+|||+.++++.|++++...
T Consensus 245 ~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 245 EVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999987653
No 119
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=6.9e-42 Score=363.23 Aligned_cols=259 Identities=27% Similarity=0.473 Sum_probs=224.2
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCH-HHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
...++|++.+.||+|+||.||+|.+. +..||||++....... .....+.+|+.+++.++||||+++++++...+.+|
T Consensus 11 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 90 (284)
T 2vgo_A 11 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIY 90 (284)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEE
Confidence 44578999999999999999999985 5579999987543211 12357889999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
+||||+++++|.+++.... .+++..++.++.||+.||.|||+++ |+|+||||+||+++.++.+||+|||++......
T Consensus 91 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 91 LMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCHERK--VIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp EEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred EEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence 9999999999999997654 6899999999999999999999998 999999999999999999999999998655432
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIV 738 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI 738 (782)
......|++.|+|||++.+..++.++|||||||++|+|++|..||...........+. .....++..++.++++||
T Consensus 168 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li 243 (284)
T 2vgo_A 168 --RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV--NVDLKFPPFLSDGSKDLI 243 (284)
T ss_dssp --CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH--TTCCCCCTTSCHHHHHHH
T ss_pred --ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHh--ccccCCCCcCCHHHHHHH
Confidence 2235578999999999999999999999999999999999999999887776655553 334567788999999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 739 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 739 ~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
.+||..||.+||++.++ +.|+||+.....
T Consensus 244 ~~~l~~~p~~Rps~~~l------l~h~~~~~~~~~ 272 (284)
T 2vgo_A 244 SKLLRYHPPQRLPLKGV------MEHPWVKANSRR 272 (284)
T ss_dssp HHHSCSSGGGSCCHHHH------HTCHHHHHHCCC
T ss_pred HHHhhcCHhhCCCHHHH------hhCHHHHhhccc
Confidence 99999999999999999 668999765543
No 120
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.6e-41 Score=362.19 Aligned_cols=259 Identities=18% Similarity=0.279 Sum_probs=218.8
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCce
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 577 (782)
....++|++.+.||+|+||.||+|.+ .++.||||++...... ..+.+|+.+++.+ +|+||+++++++......
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~ 81 (298)
T 1csn_A 6 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA----PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHN 81 (298)
T ss_dssp CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS----CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEE
T ss_pred cccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCcc----HHHHHHHHHHHHHhcCCCCCeEEeecCCCcee
Confidence 34567899999999999999999996 5778999998754432 3467799999999 799999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc-----EEEEecCCC
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT-----VKVGDFGLS 652 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~-----vkL~DFGla 652 (782)
|+||||+ +++|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++. +||+|||++
T Consensus 82 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~ 158 (298)
T 1csn_A 82 VLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS--LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 158 (298)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred EEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEeccCCCCCCCeEEEEECccc
Confidence 9999999 99999999877767999999999999999999999998 999999999999987765 999999999
Q ss_pred cccccccc-------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC---hHHHHHHhhcc--
Q 003978 653 RLKHETYL-------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN---SMQVIGAVGFM-- 720 (782)
Q Consensus 653 ~~~~~~~~-------~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~---~~~~~~~i~~~-- 720 (782)
+....... ......||+.|+|||++.+..++.++|||||||++|+|++|..||.... .......+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 238 (298)
T 1csn_A 159 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ 238 (298)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHH
T ss_pred cccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhcc
Confidence 86544321 2345579999999999999999999999999999999999999998753 33333332211
Q ss_pred -ccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 721 -NQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 721 -~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
.....+...+++++.+||.+||..||.+||++.+|++.|+++....
T Consensus 239 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~ 285 (298)
T 1csn_A 239 STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL 285 (298)
T ss_dssp HSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred CccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc
Confidence 1122344578999999999999999999999999999999887654
No 121
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=8.8e-42 Score=363.36 Aligned_cols=257 Identities=22% Similarity=0.401 Sum_probs=212.5
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
..++|.+.++||+|+||.||++... +..||+|++...... .....+.+|+++++.++||||+++++++.....+|+|
T Consensus 20 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 98 (285)
T 3is5_A 20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ-VPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIV 98 (285)
T ss_dssp HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC-SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccc-hhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEE
Confidence 3468999999999999999999984 678999999765432 2246788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhc---CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE---cCCCcEEEEecCCCcc
Q 003978 581 TEFLPRGSLFRLLQRN---TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV---DKHWTVKVGDFGLSRL 654 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~---~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl---~~~~~vkL~DFGla~~ 654 (782)
||||++++|.+++... ...+++..++.++.||+.||.|||+++ |+||||||+|||| +.++.+||+|||++..
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~ 176 (285)
T 3is5_A 99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAEL 176 (285)
T ss_dssp ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC
T ss_pred EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC--EEECCCCHHHEEEecCCCCCCEEEEeeeccee
Confidence 9999999999998542 356899999999999999999999999 9999999999999 4567899999999976
Q ss_pred cccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccC-CCCCCCHH
Q 003978 655 KHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE-IPKDVDPR 733 (782)
Q Consensus 655 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~-~p~~~~~~ 733 (782)
..... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...........+........ ....++++
T Consensus 177 ~~~~~-~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (285)
T 3is5_A 177 FKSDE-HSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQ 254 (285)
T ss_dssp -----------CTTGGGCCHHHHTT-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHH
T ss_pred cCCcc-cCcCcccccCcCChHHhcc-CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHH
Confidence 54432 2335578999999999864 578999999999999999999999998887776655543332222 22347899
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 734 WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 734 l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
+.+||.+||..||.+|||+.++ |.|+||+.+
T Consensus 255 ~~~li~~~L~~dP~~Rps~~e~------l~hp~f~~a 285 (285)
T 3is5_A 255 AVDLLKQMLTKDPERRPSAAQV------LHHEWFKQA 285 (285)
T ss_dssp HHHHHHHHTCSCTTTSCCHHHH------HTSGGGGC-
T ss_pred HHHHHHHHccCChhhCcCHHHH------hcCHHhhcC
Confidence 9999999999999999999999 678999863
No 122
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=4.4e-42 Score=373.60 Aligned_cols=260 Identities=25% Similarity=0.349 Sum_probs=216.1
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
...++|++++.||+|+||.||+|.+. ++.||||++............+.+|+.+++.++||||+++++++...+.+|+
T Consensus 22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 101 (331)
T 4aaa_A 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYL 101 (331)
T ss_dssp BCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEE
Confidence 34579999999999999999999985 7789999998777667777788899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
||||+++++|.+++.. ...+++..++.++.||+.||.|||+++ |+|+||||+||||+.++.+||+|||+++......
T Consensus 102 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 102 VFEFVDHTILDDLELF-PNGLDYQVVQKYLFQIINGIGFCHSHN--IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp EEECCSEEHHHHHHHS-TTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred EEecCCcchHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHCC--EEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 9999998888887654 346899999999999999999999999 9999999999999999999999999998665544
Q ss_pred ccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc---------------
Q 003978 660 LTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR--------------- 723 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~--------------- 723 (782)
.......||+.|+|||++.+. .++.++|||||||++|+|++|..||...........+......
T Consensus 179 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 179 EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccc
Confidence 444556799999999999875 6799999999999999999999999988776655443211000
Q ss_pred --c------------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 724 --L------------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 724 --~------------~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
. ...+.+++.+.+||.+||..||.+|||+.++ |+|+||+..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~el------l~hp~f~~~ 313 (331)
T 4aaa_A 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAEL------LHHDFFQMD 313 (331)
T ss_dssp TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGG------GGSHHHHGG
T ss_pred ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHH------hcCchhccC
Confidence 0 0113578999999999999999999999999 668999754
No 123
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.7e-41 Score=361.79 Aligned_cols=262 Identities=26% Similarity=0.473 Sum_probs=221.4
Q ss_pred cccccceeEee-eeccCCcEEEEEEEEc----CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 501 EILWEDLTIGE-QIGQGSCGTVYHAVWY----GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 501 e~~~~~y~i~~-~IG~G~~G~Vy~~~~~----~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
....++|++.+ .||+|+||.||+|.+. +..||||+++.........+.+.+|+.+++.++||||+++++++ ..+
T Consensus 12 ~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~ 90 (291)
T 1xbb_A 12 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAE 90 (291)
T ss_dssp BCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESS
T ss_pred eecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCC
Confidence 34557899998 9999999999999653 45699999987655556678899999999999999999999999 567
Q ss_pred ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
.+|+||||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+|+||||+||||+.++.+||+|||++...
T Consensus 91 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 167 (291)
T 1xbb_A 91 SWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKAL 167 (291)
T ss_dssp SEEEEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred CcEEEEEeCCCCCHHHHHHhC-cCCCHHHHHHHHHHHHHHHHHHHhCC--eEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence 789999999999999999764 46899999999999999999999999 999999999999999999999999999765
Q ss_pred ccccc---cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCC
Q 003978 656 HETYL---TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVD 731 (782)
Q Consensus 656 ~~~~~---~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~ 731 (782)
..... ......+++.|+|||++.+..++.++|||||||++|+|++ |..||...........+. .......+..++
T Consensus 168 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~ 246 (291)
T 1xbb_A 168 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-KGERMGCPAGCP 246 (291)
T ss_dssp CTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-TTCCCCCCTTCC
T ss_pred ccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCC
Confidence 43321 1223456789999999998888999999999999999999 999999988877665554 334566778899
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 732 PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 732 ~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
+++.+||.+||..||.+||++.++++.|+++...--
T Consensus 247 ~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 282 (291)
T 1xbb_A 247 REMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 282 (291)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999998866543
No 124
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.8e-41 Score=358.51 Aligned_cols=255 Identities=25% Similarity=0.395 Sum_probs=219.1
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
..++|++.++||+|+||.||++.+. +..||+|++....... ...+.+|+++++.++||||+++++++.....+|+|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED--VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSC--HHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccch--HHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 3468999999999999999999985 4579999987654322 45788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE---cCCCcEEEEecCCCccccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV---DKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl---~~~~~vkL~DFGla~~~~~ 657 (782)
|||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+|+||||+|||+ +.++.+||+|||++.....
T Consensus 85 ~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~ 161 (277)
T 3f3z_A 85 MELCTGGELFERVVHK-RVFRESDAARIMKDVLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161 (277)
T ss_dssp EECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred EeccCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence 9999999999999764 45899999999999999999999999 9999999999999 7888999999999976544
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC----CCCCHH
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP----KDVDPR 733 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p----~~~~~~ 733 (782)
.. ......||+.|+|||++.+. ++.++|||||||++|+|++|..||...........+... ...++ ..+++.
T Consensus 162 ~~-~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 237 (277)
T 3f3z_A 162 GK-MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREG--TFTFPEKDWLNVSPQ 237 (277)
T ss_dssp TS-CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCHHHHTTSCHH
T ss_pred cc-chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC--CCCCCchhhhcCCHH
Confidence 32 33355799999999998775 889999999999999999999999988877766665332 22223 268999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 734 WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 734 l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
+.+||.+||..||.+|||+.++ |+|+||+....
T Consensus 238 ~~~li~~~l~~dp~~R~s~~~~------l~h~~~~~~~~ 270 (277)
T 3f3z_A 238 AESLIRRLLTKSPKQRITSLQA------LEHEWFEKQLS 270 (277)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHH------TTSHHHHHHHC
T ss_pred HHHHHHHHccCChhhCcCHHHH------hcCHHHhcccc
Confidence 9999999999999999999999 67899977544
No 125
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.1e-41 Score=358.36 Aligned_cols=262 Identities=32% Similarity=0.562 Sum_probs=224.7
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEcC-CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYG-SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~-~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
.|++..++|++++.||+|+||.||+|.+.+ ..||||++...... ...+.+|+++++.++||||+++++++. .+..
T Consensus 7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~ 82 (279)
T 1qpc_A 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVVT-QEPI 82 (279)
T ss_dssp TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred hcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCccc---HHHHHHHHHHHHhCCCcCcceEEEEEc-CCCc
Confidence 467778899999999999999999999865 47999999765543 356888999999999999999999987 4568
Q ss_pred eEEEeecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
++||||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.+||+|||++....
T Consensus 83 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 160 (279)
T 1qpc_A 83 YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIE 160 (279)
T ss_dssp EEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHhhEEEcCCCCEEECCCccccccc
Confidence 99999999999999996532 25899999999999999999999999 9999999999999999999999999998655
Q ss_pred cccc-cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHH
Q 003978 657 ETYL-TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 734 (782)
Q Consensus 657 ~~~~-~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l 734 (782)
.... ......+++.|+|||++.+..++.++|||||||++|+|++ |..||...........+.. ......+..++.++
T Consensus 161 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 239 (279)
T 1qpc_A 161 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-GYRMVRPDNCPEEL 239 (279)
T ss_dssp SSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-TCCCCCCTTCCHHH
T ss_pred CcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhc-ccCCCCcccccHHH
Confidence 4322 2234457889999999998889999999999999999999 9999998887776665532 23455677899999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 735 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 735 ~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
.+||.+||..||++|||+.++++.|+++.....
T Consensus 240 ~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 240 YQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999988866543
No 126
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=6.8e-42 Score=371.95 Aligned_cols=256 Identities=18% Similarity=0.269 Sum_probs=214.3
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCceeE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~l 579 (782)
..++|++++.||+|+||.||+|.+ .++.||||++...... ..+.+|+.+++.+ +||||+++++++......|+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 82 (330)
T 2izr_A 7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA----PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAM 82 (330)
T ss_dssp ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS----CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEE
T ss_pred EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch----HHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEE
Confidence 457899999999999999999996 5778999998765432 3577899999999 89999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc-----EEEEecCCCcc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT-----VKVGDFGLSRL 654 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~-----vkL~DFGla~~ 654 (782)
||||+ +++|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++. +||+|||+++.
T Consensus 83 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~ 159 (330)
T 2izr_A 83 VLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKN--LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE 159 (330)
T ss_dssp EEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred EEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence 99999 99999999876678999999999999999999999998 999999999999998887 99999999986
Q ss_pred cccccc-------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH---HHHHHhhccccc-
Q 003978 655 KHETYL-------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM---QVIGAVGFMNQR- 723 (782)
Q Consensus 655 ~~~~~~-------~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~---~~~~~i~~~~~~- 723 (782)
...... ......||+.|+|||++.+..++.++|||||||++|+|++|..||...... ..+..+......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~ 239 (330)
T 2izr_A 160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRAT 239 (330)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHS
T ss_pred eecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccC
Confidence 543221 124567999999999999999999999999999999999999999875432 223332111111
Q ss_pred --cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 724 --LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 724 --~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
..+...+| ++.+||.+||..||.+||++.+|++.|+++....
T Consensus 240 ~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 240 PIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp CHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred CHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 11123355 9999999999999999999999999999886653
No 127
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.4e-41 Score=380.43 Aligned_cols=253 Identities=24% Similarity=0.372 Sum_probs=201.2
Q ss_pred ccccceeEe-eeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHH-HhCCCCceeEEeeeeec----
Q 003978 502 ILWEDLTIG-EQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLM-KRLRHPNVLLFMGAVTS---- 573 (782)
Q Consensus 502 ~~~~~y~i~-~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il-~~l~HpnIv~l~~~~~~---- 573 (782)
...++|.+. ++||+|+||.||++.+. ++.||||++... ..+.+|+.++ +..+||||+++++++..
T Consensus 58 ~~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~ 130 (400)
T 1nxk_A 58 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAG 130 (400)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred cccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecccC
Confidence 345678877 78999999999999984 678999998642 3456788877 45589999999999865
Q ss_pred CCceeEEEeecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC---CCcEEEEec
Q 003978 574 PQRLCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK---HWTVKVGDF 649 (782)
Q Consensus 574 ~~~~~lv~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~---~~~vkL~DF 649 (782)
...+|||||||+||+|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||+||||+. ++.+||+||
T Consensus 131 ~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~~~~~~~kl~DF 208 (400)
T 1nxk_A 131 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDF 208 (400)
T ss_dssp EEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred CcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCcCcceEEEecCCCCccEEEEec
Confidence 567899999999999999997643 45899999999999999999999999 999999999999987 789999999
Q ss_pred CCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH----HHHHhhcccccc-
Q 003978 650 GLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ----VIGAVGFMNQRL- 724 (782)
Q Consensus 650 Gla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~----~~~~i~~~~~~~- 724 (782)
|+++...... .....+||+.|+|||++.+..++.++|||||||++|+|++|..||....... ....+.......
T Consensus 209 G~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~ 287 (400)
T 1nxk_A 209 GFAKETTSHN-SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP 287 (400)
T ss_dssp TTCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCC
T ss_pred ccccccCCCC-ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCC
Confidence 9998654322 2335678999999999999999999999999999999999999997654321 122222111111
Q ss_pred -CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 725 -EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 725 -~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
.....++.++.+||.+||..||.+|||+.++ +.|+||+..
T Consensus 288 ~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ei------l~hp~~~~~ 328 (400)
T 1nxk_A 288 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF------MNHPWIMQS 328 (400)
T ss_dssp TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHH------HHSHHHHTT
T ss_pred CcccccCCHHHHHHHHHHCCCChhHCcCHHHH------hcCccccCC
Confidence 1225689999999999999999999999999 678998754
No 128
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.1e-41 Score=368.81 Aligned_cols=259 Identities=23% Similarity=0.350 Sum_probs=221.7
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCH----HHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSD----EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~----~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
...++|++++.||+|+||.||+|.+. ++.||||++....... .....+.+|+.+++.++||||+++++++....
T Consensus 9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 88 (321)
T 2a2a_A 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT 88 (321)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence 34578999999999999999999984 7789999997654321 12467889999999999999999999999999
Q ss_pred ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC----cEEEEecCC
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW----TVKVGDFGL 651 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~----~vkL~DFGl 651 (782)
.+|+||||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+|+||||+|||++.++ .+||+|||+
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~--ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~ 165 (321)
T 2a2a_A 89 DVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (321)
T ss_dssp EEEEEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred EEEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence 999999999999999999764 46899999999999999999999998 99999999999999887 799999999
Q ss_pred CcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc--cCCCCC
Q 003978 652 SRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR--LEIPKD 729 (782)
Q Consensus 652 a~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~--~~~p~~ 729 (782)
+....... ......||+.|+|||++.+..++.++|||||||++|+|++|..||...........+...... ..++..
T Consensus 166 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 244 (321)
T 2a2a_A 166 AHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSH 244 (321)
T ss_dssp CEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTT
T ss_pred ceecCccc-cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcc
Confidence 97655432 223457999999999999999999999999999999999999999988877766665432221 122357
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 730 VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 730 ~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
++..+.+||.+||..||.+|||+.++ +.|+||+..
T Consensus 245 ~~~~~~~li~~~l~~dp~~Rps~~e~------l~hp~~~~~ 279 (321)
T 2a2a_A 245 TSELAKDFIRKLLVKETRKRLTIQEA------LRHPWITPV 279 (321)
T ss_dssp CCHHHHHHHHTTSCSSTTTSCCHHHH------HHSTTTSCS
T ss_pred cCHHHHHHHHHHcCCChhhCcCHHHH------hcCccccCC
Confidence 89999999999999999999999999 567887543
No 129
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=6.7e-42 Score=392.41 Aligned_cols=261 Identities=28% Similarity=0.452 Sum_probs=221.8
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
...++|+++++||+|+||.||+|.+. ++.||||++.+..........+.+|+.+|+.++|||||++++++.....+|+
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 98 (486)
T 3mwu_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (486)
T ss_dssp HHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence 34578999999999999999999984 7789999997543322234678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc---CCCcEEEEecCCCcccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD---KHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~---~~~~vkL~DFGla~~~~ 656 (782)
|||||.+++|.+++... ..+++..++.++.||+.||.|||++| |+||||||+||||+ .++.+||+|||+++...
T Consensus 99 v~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 175 (486)
T 3mwu_A 99 VGELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (486)
T ss_dssp EECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred EEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence 99999999999998765 46899999999999999999999999 99999999999995 45679999999997654
Q ss_pred cccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC--CCCCHHH
Q 003978 657 ETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP--KDVDPRW 734 (782)
Q Consensus 657 ~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p--~~~~~~l 734 (782)
... .....+||+.|+|||++.+. ++.++|||||||++|+|++|..||...+.......+.........+ ..+++++
T Consensus 176 ~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 253 (486)
T 3mwu_A 176 QNT-KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA 253 (486)
T ss_dssp CC-----CCTTGGGGCCGGGGGSC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHH
T ss_pred CCC-ccCCCcCCCCCCCHHHhCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHH
Confidence 432 23355799999999999874 8899999999999999999999999988888777765443333322 4689999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 735 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 735 ~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
++||.+||..||.+|||+.++ |.|+||+.....
T Consensus 254 ~~li~~~L~~dp~~R~t~~~~------l~hp~~~~~~~~ 286 (486)
T 3mwu_A 254 KDLIRKMLTFHPSLRITATQC------LEHPWIQKYSSE 286 (486)
T ss_dssp HHHHHHHTCSSTTTSCCHHHH------HHCHHHHHTCCC
T ss_pred HHHHHHHcCCChhhCcCHHHH------hcCHhhccCccc
Confidence 999999999999999999999 678999876543
No 130
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.1e-41 Score=392.58 Aligned_cols=263 Identities=27% Similarity=0.433 Sum_probs=221.3
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCH-----------HHHHHHHHHHHHHHhCCCCceeEEe
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSD-----------EVIHSFRQEVSLMKRLRHPNVLLFM 568 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~-----------~~~~~~~~Ei~il~~l~HpnIv~l~ 568 (782)
...++|+++++||+|+||.||+|.+. +..||||++....... ...+.+.+|+.+|+.++|||||+++
T Consensus 33 ~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~ 112 (504)
T 3q5i_A 33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF 112 (504)
T ss_dssp CGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred CcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 35678999999999999999999984 5679999997654321 2346788999999999999999999
Q ss_pred eeeecCCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC---cEE
Q 003978 569 GAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW---TVK 645 (782)
Q Consensus 569 ~~~~~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~---~vk 645 (782)
+++.....+|+|||||++++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++ .+|
T Consensus 113 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 113 DVFEDKKYFYLVTEFYEGGELFEQIINR-HKFDECDAANIMKQILSGICYLHKHN--IVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESSTTCCSSEE
T ss_pred EEEEcCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCcHHHEEEecCCCCccEE
Confidence 9999999999999999999999999764 46999999999999999999999999 99999999999998775 699
Q ss_pred EEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccC
Q 003978 646 VGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE 725 (782)
Q Consensus 646 L~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~ 725 (782)
|+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...+.......+........
T Consensus 190 l~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~ 267 (504)
T 3q5i_A 190 IVDFGLSSFFSKDY-KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFD 267 (504)
T ss_dssp ECCCTTCEECCTTS-CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC
T ss_pred EEECCCCEEcCCCC-ccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 99999998665432 2335679999999999875 588999999999999999999999999888887777654332222
Q ss_pred --CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcCC
Q 003978 726 --IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVG 775 (782)
Q Consensus 726 --~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~~ 775 (782)
....+++++++||.+||..||.+|||+.++ |.|+||+.......
T Consensus 268 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~------l~h~~~~~~~~~~~ 313 (504)
T 3q5i_A 268 FNDWKNISDEAKELIKLMLTYDYNKRCTAEEA------LNSRWIKKYANNIN 313 (504)
T ss_dssp HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHH------HTSHHHHHTCCCCC
T ss_pred ccccCCCCHHHHHHHHHHcCCChhHCCCHHHH------hcCHhhhhchhccc
Confidence 225789999999999999999999999999 67899987665543
No 131
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=367.79 Aligned_cols=260 Identities=28% Similarity=0.433 Sum_probs=212.9
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeec----
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTS---- 573 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~---- 573 (782)
....++|++++.||+|+||.||+|.+ .++.||||++...... ...+.+|+.+++.+ +||||+++++++..
T Consensus 20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 20 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE---EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSST---THHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred cCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCccc---HHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 34567899999999999999999998 6778999999765433 25677899999999 79999999999976
Q ss_pred --CCceeEEEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecC
Q 003978 574 --PQRLCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFG 650 (782)
Q Consensus 574 --~~~~~lv~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFG 650 (782)
...+|+||||+++++|.+++... ...+++..++.++.||+.||.|||+++ |+|+||||+||||+.++.+||+|||
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~~~~~~kl~Dfg 174 (326)
T 2x7f_A 97 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK--VIHRDIKGQNVLLTENAEVKLVDFG 174 (326)
T ss_dssp CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTCCEEECCCT
T ss_pred cccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCcHHHEEEcCCCCEEEeeCc
Confidence 46789999999999999999764 346899999999999999999999999 9999999999999999999999999
Q ss_pred CCcccccccccccCCCCCCcccCccccc-----CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccC
Q 003978 651 LSRLKHETYLTTKTGKGTPQWMAPEVLR-----NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE 725 (782)
Q Consensus 651 la~~~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~ 725 (782)
++..............||+.|+|||++. +..++.++|||||||++|+|++|..||...........+........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 254 (326)
T 2x7f_A 175 VSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRL 254 (326)
T ss_dssp TTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC
T ss_pred CceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccccC
Confidence 9986654433344557999999999997 56678999999999999999999999998887766555543333334
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 726 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 726 ~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
.+..++..+.+||.+||..||.+||++.++ +.|+||+...
T Consensus 255 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~l------l~hp~~~~~~ 294 (326)
T 2x7f_A 255 KSKKWSKKFQSFIESCLVKNHSQRPATEQL------MKHPFIRDQP 294 (326)
T ss_dssp SCSCSCHHHHHHHHHHCCSSGGGSCCHHHH------HTSHHHHCCT
T ss_pred CccccCHHHHHHHHHHhccChhhCCCHHHH------hhChHHhhCc
Confidence 456789999999999999999999999999 5678887654
No 132
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=3.6e-42 Score=363.92 Aligned_cols=263 Identities=25% Similarity=0.408 Sum_probs=221.2
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeee--cCCceeE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT--SPQRLCI 579 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~--~~~~~~l 579 (782)
.++|++++.||+|+||.||++.+ .++.||+|++..........+.+.+|+.+++.++||||+++++++. ....+|+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 46899999999999999999998 4678999999887777777788999999999999999999999874 4678999
Q ss_pred EEeecCCCCHHHHHhhc---CCcchHHHHHHHHHHHHHHHHhhhcCC---CCeeecCCCCCcEEEcCCCcEEEEecCCCc
Q 003978 580 VTEFLPRGSLFRLLQRN---TTKLDWRRRILMALDIARGVSYLHHCN---PPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 653 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~---~~~l~~~~~~~i~~qll~aL~~LH~~~---~~ivHrDIKp~NILl~~~~~vkL~DFGla~ 653 (782)
||||+++++|.+++... ...+++..++.++.||+.||.|||+.+ .+|+|+||||+|||++.++.+||+|||++.
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999999653 234899999999999999999999876 339999999999999999999999999987
Q ss_pred ccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHH
Q 003978 654 LKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPR 733 (782)
Q Consensus 654 ~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~ 733 (782)
.............||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+.. .....++..++.+
T Consensus 165 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~-~~~~~~~~~~~~~ 243 (279)
T 2w5a_A 165 ILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE-GKFRRIPYRYSDE 243 (279)
T ss_dssp HC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-TCCCCCCTTSCHH
T ss_pred eeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhh-cccccCCcccCHH
Confidence 654432222334689999999999999999999999999999999999999998887766655532 2334667789999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 734 WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 734 l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
+.+||.+||..||.+||++.++ +.+.|+.+....
T Consensus 244 l~~li~~~l~~~p~~Rps~~~l------l~~~~~~~~~~~ 277 (279)
T 2w5a_A 244 LNEIITRMLNLKDYHRPSVEEI------LENPLILEHHHH 277 (279)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHH------HTSTTCCGGGSC
T ss_pred HHHHHHHHcCCCcccCCCHHHH------HhChhhhhhccc
Confidence 9999999999999999999999 456666655443
No 133
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=4.2e-42 Score=370.47 Aligned_cols=251 Identities=25% Similarity=0.350 Sum_probs=206.5
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce-
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL- 577 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~- 577 (782)
...++|++.+.||+|+||.||++.+ .++.||||+++.... .......+.+|+.+++.++||||+++++++......
T Consensus 9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 88 (311)
T 3ork_A 9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAG 88 (311)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTE
T ss_pred eecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCC
Confidence 4557899999999999999999997 567899999987544 445667889999999999999999999998766544
Q ss_pred ---eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 578 ---CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 578 ---~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
|+|||||++++|.+++.... .+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++.
T Consensus 89 ~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 89 PLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred cccEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--CCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 99999999999999997643 6899999999999999999999999 99999999999999999999999999976
Q ss_pred ccccc---ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc--ccCCCCC
Q 003978 655 KHETY---LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ--RLEIPKD 729 (782)
Q Consensus 655 ~~~~~---~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~--~~~~p~~ 729 (782)
..... .......||+.|+|||++.+..++.++|||||||++|+|++|..||................. .......
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEG 245 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTT
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCC
Confidence 54322 122345689999999999999999999999999999999999999998887665544432221 1123356
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHH
Q 003978 730 VDPRWAAIVESCWHSDPQCRPSFQEL 755 (782)
Q Consensus 730 ~~~~l~~LI~~cL~~dP~~RPs~~el 755 (782)
+++++.+||.+||..||.+||+..++
T Consensus 246 ~~~~l~~li~~~l~~dP~~R~~~~~~ 271 (311)
T 3ork_A 246 LSADLDAVVLKALAKNPENRYQTAAE 271 (311)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCSSHHH
T ss_pred CCHHHHHHHHHHHhcCHhhChhhHHH
Confidence 89999999999999999999976666
No 134
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.3e-41 Score=364.24 Aligned_cols=258 Identities=27% Similarity=0.459 Sum_probs=218.2
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
...++|++.+.||+|+||.||+|.+. ++.||||++..... ...+.+|+.+++.++||||+++++++...+.+|+
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD----LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC----CHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH----HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 44578999999999999999999985 77899999976543 2467789999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
||||+++++|.+++......+++..++.++.||+.||.|||+++ |+|+||||+||+++.++.+||+|||++.......
T Consensus 102 v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (314)
T 3com_A 102 VMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR--KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM 179 (314)
T ss_dssp EEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECBTTB
T ss_pred EeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcCCCcCHHHEEECCCCCEEEeecccchhhhhhc
Confidence 99999999999999866677999999999999999999999999 9999999999999999999999999997665544
Q ss_pred ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-cccCCCCCCCHHHHHHH
Q 003978 660 LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN-QRLEIPKDVDPRWAAIV 738 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~-~~~~~p~~~~~~l~~LI 738 (782)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||...........+.... .....+..++..+.+||
T Consensus 180 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 259 (314)
T 3com_A 180 AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFV 259 (314)
T ss_dssp SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHH
T ss_pred cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHH
Confidence 44455679999999999999999999999999999999999999999887766554443221 12334556899999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 739 ESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 739 ~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
.+||..||.+|||+.++ +.|+||+...
T Consensus 260 ~~~l~~dp~~Rpt~~~l------l~~~~~~~~~ 286 (314)
T 3com_A 260 KQCLVKSPEQRATATQL------LQHPFVRSAK 286 (314)
T ss_dssp HHHTCSCTTTSCCHHHH------TTSHHHHTCC
T ss_pred HHHccCChhhCcCHHHH------HhCHHHhcCC
Confidence 99999999999999999 6689997654
No 135
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4.3e-42 Score=408.78 Aligned_cols=259 Identities=24% Similarity=0.397 Sum_probs=225.4
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCc
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQR 576 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~ 576 (782)
....++|+++++||+|+||.||+|.+. ++.||||++++... .......+..|..+|..+ +||||+++++++...+.
T Consensus 337 ~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~ 416 (674)
T 3pfq_A 337 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 416 (674)
T ss_dssp ---CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSE
T ss_pred cccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCE
Confidence 455679999999999999999999984 56699999976432 112345677899999887 69999999999999999
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
+||||||++||+|.+++.... .+++..++.++.||+.||.|||+++ ||||||||+||||+.++.+||+|||+++...
T Consensus 417 ~~lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~g--IiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 417 LYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTS--EECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEEEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC--eEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 999999999999999998653 6999999999999999999999999 9999999999999999999999999998654
Q ss_pred cccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHH
Q 003978 657 ETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 736 (782)
Q Consensus 657 ~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~ 736 (782)
.........+||+.|+|||++.+..++.++|||||||+||||++|..||...+.......+. .....+|..+++++.+
T Consensus 494 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~--~~~~~~p~~~s~~~~~ 571 (674)
T 3pfq_A 494 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM--EHNVAYPKSMSKEAVA 571 (674)
T ss_dssp CTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--SSCCCCCTTSCHHHHH
T ss_pred cCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHH--hCCCCCCccCCHHHHH
Confidence 44445557789999999999999999999999999999999999999999988888777773 4456778899999999
Q ss_pred HHHHhhhhCCCCCCCH-----HHHHHHHHHHHHHHhhcc
Q 003978 737 IVESCWHSDPQCRPSF-----QELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 737 LI~~cL~~dP~~RPs~-----~ell~~L~~L~~~~~~~~ 770 (782)
||.+||.+||.+||++ .+| +.|+||+.+
T Consensus 572 li~~lL~~dP~~R~~~~~~~~~ei------~~h~ff~~i 604 (674)
T 3pfq_A 572 ICKGLMTKHPGKRLGCGPEGERDI------KEHAFFRYI 604 (674)
T ss_dssp HHHHHSCSSSTTCTTCSTTHHHHH------HSSGGGSSC
T ss_pred HHHHHccCCHHHCCCCCCCcHHHH------hcCccccCC
Confidence 9999999999999987 777 568898653
No 136
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=5.2e-42 Score=396.77 Aligned_cols=258 Identities=24% Similarity=0.363 Sum_probs=221.1
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCH-HHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSD-EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
...++|++.+.||+|+||.||+|.+ .++.||||++.+..... .....+.+|+.+|+.++|||||++++++.....+|
T Consensus 182 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~ 261 (543)
T 3c4z_A 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLC 261 (543)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEE
Confidence 3457899999999999999999998 47789999997643211 23456788999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhc---CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 579 IVTEFLPRGSLFRLLQRN---TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~---~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
+|||||+||+|.+++... ...+++..++.++.||+.||.|||++| |+||||||+||||+.+|.+||+|||+++..
T Consensus 262 lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g--IvHrDLKP~NILl~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVEL 339 (543)
T ss_dssp EEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC--CcccCCChHHEEEeCCCCEEEeecceeeec
Confidence 999999999999999754 346899999999999999999999999 999999999999999999999999999876
Q ss_pred ccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC----hHHHHHHhhccccccCCCCCCC
Q 003978 656 HETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLN----SMQVIGAVGFMNQRLEIPKDVD 731 (782)
Q Consensus 656 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~----~~~~~~~i~~~~~~~~~p~~~~ 731 (782)
..........+||+.|+|||++.+..++.++|||||||++|||++|..||.... .......+ ......+|..++
T Consensus 340 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i--~~~~~~~p~~~s 417 (543)
T 3c4z_A 340 KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV--LEQAVTYPDKFS 417 (543)
T ss_dssp CTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHH--HHCCCCCCTTSC
T ss_pred cCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHH--hhcccCCCcccC
Confidence 554434445689999999999999999999999999999999999999997653 23333333 234556778899
Q ss_pred HHHHHHHHHhhhhCCCCCCCH-----HHHHHHHHHHHHHHhhc
Q 003978 732 PRWAAIVESCWHSDPQCRPSF-----QELVDKLRDLQRQYFQA 769 (782)
Q Consensus 732 ~~l~~LI~~cL~~dP~~RPs~-----~ell~~L~~L~~~~~~~ 769 (782)
+++++||.+||..||.+||++ .++ +.|+||+.
T Consensus 418 ~~~~~li~~lL~~dP~~R~~~~~~~a~ei------~~Hpff~~ 454 (543)
T 3c4z_A 418 PASKDFCEALLQKDPEKRLGFRDGSCDGL------RTHPLFRD 454 (543)
T ss_dssp HHHHHHHHHHSCSSGGGSCCCBTTBSHHH------HTSGGGTT
T ss_pred HHHHHHHHHhccCCHhHCCCCcccCHHHH------HcCccccC
Confidence 999999999999999999964 677 57899975
No 137
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=3.6e-42 Score=377.19 Aligned_cols=252 Identities=24% Similarity=0.387 Sum_probs=212.0
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCceeE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~l 579 (782)
..++|++.+.||+|+||.||+|.++ ++.||||++.+.... ..+|++++..+ +||||+++++++.+...+|+
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD------PTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC------CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC------hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 3568999999999999999999984 677999999765432 34578888877 79999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC----CcEEEEecCCCccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH----WTVKVGDFGLSRLK 655 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~----~~vkL~DFGla~~~ 655 (782)
|||||.||+|.+++... ..+++..++.++.||+.||.|||++| |+||||||+|||+..+ +.+||+|||+++..
T Consensus 94 v~E~~~gg~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~g--ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 94 VTELMKGGELLDKILRQ-KFFSEREASAVLFTITKTVEYLHAQG--VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp EECCCCSCBHHHHHHTC-TTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred EEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 99999999999999764 46899999999999999999999999 9999999999998543 35999999999866
Q ss_pred ccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCC---ChHHHHHHhhccccc--cCCCCCC
Q 003978 656 HETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNL---NSMQVIGAVGFMNQR--LEIPKDV 730 (782)
Q Consensus 656 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~---~~~~~~~~i~~~~~~--~~~p~~~ 730 (782)
..........+||+.|+|||++.+..++.++|||||||++|+|++|..||... ........+...... ...+..+
T Consensus 171 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 250 (342)
T 2qr7_A 171 RAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSV 250 (342)
T ss_dssp BCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTS
T ss_pred cCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccC
Confidence 55444445668999999999999888899999999999999999999999763 334444444322221 2233578
Q ss_pred CHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 731 DPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 731 ~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
++++++||.+||..||.+||++.++ ++|+||+.
T Consensus 251 s~~~~~li~~~L~~dP~~R~t~~~i------l~hp~~~~ 283 (342)
T 2qr7_A 251 SDTAKDLVSKMLHVDPHQRLTAALV------LRHPWIVH 283 (342)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHH------TTSHHHHT
T ss_pred CHHHHHHHHHHCCCChhHCcCHHHH------hcCCeecC
Confidence 9999999999999999999999999 67899854
No 138
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=5e-42 Score=368.95 Aligned_cols=259 Identities=27% Similarity=0.322 Sum_probs=208.1
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCC---HHHHHHHHHHHHHHHhC---CCCceeEEeeeeec
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYS---DEVIHSFRQEVSLMKRL---RHPNVLLFMGAVTS 573 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~---~~~~~~~~~Ei~il~~l---~HpnIv~l~~~~~~ 573 (782)
...++|+++++||+|+||.||+|.+ .++.||||++...... ......+.+|+.+++.+ .||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 3457899999999999999999996 5778999998754321 11123455677766665 59999999999876
Q ss_pred CC-----ceeEEEeecCCCCHHHHHhhcCC-cchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEE
Q 003978 574 PQ-----RLCIVTEFLPRGSLFRLLQRNTT-KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVG 647 (782)
Q Consensus 574 ~~-----~~~lv~E~~~ggsL~~~l~~~~~-~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~ 647 (782)
.. .++++|||+. ++|.+++..... .+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCTTTEEECTTSCEEEC
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcCCCCEEEe
Confidence 55 4799999996 599999976543 3899999999999999999999999 9999999999999999999999
Q ss_pred ecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc---
Q 003978 648 DFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL--- 724 (782)
Q Consensus 648 DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~--- 724 (782)
|||+++...... ......||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+......+
T Consensus 163 Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 241 (308)
T 3g33_A 163 DFGLARIYSYQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 241 (308)
T ss_dssp SCSCTTTSTTCC-CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred eCccccccCCCc-ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 999997654332 2234578999999999999999999999999999999999999999888777665543211100
Q ss_pred ----------------------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 725 ----------------------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 725 ----------------------~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
.+.+.+++++.+||.+||..||.+|||+.++ |+|+||+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~------l~h~~~~~~ 303 (308)
T 3g33_A 242 DWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRA------LQHSYLHKD 303 (308)
T ss_dssp TSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHH------HTSTTC---
T ss_pred hccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHH------hcCccccCC
Confidence 1124578999999999999999999999999 678999764
No 139
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=8.5e-42 Score=388.36 Aligned_cols=258 Identities=31% Similarity=0.575 Sum_probs=224.0
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEc-CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWY-GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 576 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~-~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 576 (782)
..+++..++|++.++||+|+||.||+|.+. +..||||+++..... .+.+.+|+.+|+.++|||||++++++. ...
T Consensus 181 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~ 256 (454)
T 1qcf_A 181 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS---VEAFLAEANVMKTLQHDKLVKLHAVVT-KEP 256 (454)
T ss_dssp TCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBC---HHHHHHHHHHHTTCCCTTBCCEEEEEC-SSS
T ss_pred cceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCcc---HHHHHHHHHHHhhCCCCCEeeEEEEEe-CCc
Confidence 346778889999999999999999999985 567999999765433 467889999999999999999999987 567
Q ss_pred eeEEEeecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
+|+|||||.+|+|.+++.... ..+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+++..
T Consensus 257 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DFG~a~~~ 334 (454)
T 1qcf_A 257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASLVCKIADFGLARVI 334 (454)
T ss_dssp CEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCSGGGEEECTTCCEEECSTTGGGGB
T ss_pred cEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCHHHEEECCCCcEEEeeCCCceEc
Confidence 899999999999999997542 35788899999999999999999998 999999999999999999999999999865
Q ss_pred ccccc-cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHH
Q 003978 656 HETYL-TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPR 733 (782)
Q Consensus 656 ~~~~~-~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~ 733 (782)
..... ......+++.|+|||++.+..++.++|||||||+||||++ |..||......+....+. ...+...|..++++
T Consensus 335 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~-~~~~~~~~~~~~~~ 413 (454)
T 1qcf_A 335 EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE-RGYRMPRPENCPEE 413 (454)
T ss_dssp CCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH-HTCCCCCCTTSCHH
T ss_pred CCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHH
Confidence 44321 2233456889999999998899999999999999999999 999999988887776664 23455667889999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 734 WAAIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 734 l~~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
+.+||.+||..||++|||+.+|++.|+++
T Consensus 414 l~~li~~cl~~dp~~RPt~~~i~~~L~~~ 442 (454)
T 1qcf_A 414 LYNIMMRCWKNRPEERPTFEYIQSVLDDF 442 (454)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 99999999999999999999999887765
No 140
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.3e-41 Score=391.01 Aligned_cols=257 Identities=28% Similarity=0.410 Sum_probs=215.2
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
..++|+++++||+|+||.||+|.+ .+..||||++.+..........+.+|+.+|+.++|||||++++++.....+|+|
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 456899999999999999999998 467899999987654443456788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC---CCcEEEEecCCCccccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK---HWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~---~~~vkL~DFGla~~~~~ 657 (782)
||||.+++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+. ++.+||+|||++.....
T Consensus 115 ~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 115 MECYKGGELFDEIIHR-MKFNEVDAAVIIKQVLSGVTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp EECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred EecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 9999999999998764 46899999999999999999999999 999999999999976 45599999999986654
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCC--CCCCCHHHH
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEI--PKDVDPRWA 735 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~--p~~~~~~l~ 735 (782)
.. .....+||+.|+|||++.+ .++.++|||||||++|+|++|..||...........+......... ...+++.++
T Consensus 192 ~~-~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 269 (494)
T 3lij_A 192 QK-KMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAK 269 (494)
T ss_dssp TB-CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHH
T ss_pred Cc-cccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHH
Confidence 32 2335679999999999875 5899999999999999999999999999888877776543333222 246899999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
+||.+||..||.+|||+.++ |+|+||+..
T Consensus 270 ~li~~~L~~dp~~R~s~~e~------l~hp~~~~~ 298 (494)
T 3lij_A 270 DLIKQMLQFDSQRRISAQQA------LEHPWIKEM 298 (494)
T ss_dssp HHHHHHTCSSTTTSCCHHHH------HTCHHHHHH
T ss_pred HHHHHHCCCChhhCccHHHH------hcCcccccC
Confidence 99999999999999999999 567888653
No 141
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.4e-41 Score=363.13 Aligned_cols=261 Identities=31% Similarity=0.527 Sum_probs=219.3
Q ss_pred cccceeEeeeeccCCcEEEEEEEEcCC-----eEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeee-ecCCc
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWYGS-----DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAV-TSPQR 576 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~~~-----~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~-~~~~~ 576 (782)
...+|++.++||+|+||.||+|.+... .||+|.+.... .....+.+.+|+.+++.++||||+++++++ ..++.
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 101 (298)
T 3f66_A 23 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 101 (298)
T ss_dssp GGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred cceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC-CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCc
Confidence 345799999999999999999986322 47888886533 445667889999999999999999999985 55668
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
.|+||||+++++|.+++......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 102 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~ 179 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMY 179 (298)
T ss_dssp CEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred eEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCchheEEECCCCCEEECccccccccc
Confidence 89999999999999999876777899999999999999999999999 9999999999999999999999999997654
Q ss_pred ccc----ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCC
Q 003978 657 ETY----LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVD 731 (782)
Q Consensus 657 ~~~----~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~ 731 (782)
... .......||+.|+|||++.+..++.++|||||||++|+|++ |.+||...+.......+. .......+..++
T Consensus 180 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 258 (298)
T 3f66_A 180 DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCP 258 (298)
T ss_dssp CGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHH-TTCCCCCCTTCC
T ss_pred ccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHh-cCCCCCCCccCC
Confidence 322 12233457889999999999999999999999999999999 677887776665554443 233455677899
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 732 PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 732 ~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
..+.+||.+||..||.+|||+.++++.|+++...++
T Consensus 259 ~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 259 DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999887654
No 142
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.1e-41 Score=370.28 Aligned_cols=259 Identities=27% Similarity=0.523 Sum_probs=215.4
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCe----EEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSD----VAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~----vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
...++|+++++||+|+||.||+|.+. ++. ||+|.+.... .....+.+.+|+.+++.++||||+++++++...
T Consensus 12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~- 89 (327)
T 3poz_A 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS- 89 (327)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-
T ss_pred cCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-
Confidence 34578999999999999999999873 333 5777765332 233456788999999999999999999999875
Q ss_pred ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
..++||||+.+++|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++..
T Consensus 90 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 167 (327)
T 3poz_A 90 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp SEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred CeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCChheEEECCCCCEEEccCcceeEc
Confidence 478999999999999999887778999999999999999999999998 999999999999999999999999999765
Q ss_pred cccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCH
Q 003978 656 HETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDP 732 (782)
Q Consensus 656 ~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~ 732 (782)
.... .......||+.|+|||++.+..++.++|||||||++|+|++ |..||...........+. .......+..++.
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 246 (327)
T 3poz_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-KGERLPQPPICTI 246 (327)
T ss_dssp TTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-TTCCCCCCTTBCH
T ss_pred cCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHH-cCCCCCCCccCCH
Confidence 4322 22234457889999999999999999999999999999999 999999887766555443 3335566778999
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003978 733 RWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 765 (782)
Q Consensus 733 ~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~ 765 (782)
++.+||.+||..||.+||++.++++.|.++...
T Consensus 247 ~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 247 DVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 999999999999999999999999999998653
No 143
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.7e-41 Score=367.05 Aligned_cols=261 Identities=29% Similarity=0.495 Sum_probs=217.8
Q ss_pred ceeEeeeeccCCcEEEEEEEE------cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC--Cce
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW------YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP--QRL 577 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~------~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~ 577 (782)
.|+++++||+|+||.||++.+ .++.||||+++... .......+.+|+++|+.++||||+++++++... ..+
T Consensus 32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 110 (318)
T 3lxp_A 32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA-GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASL 110 (318)
T ss_dssp GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEE
T ss_pred HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc-ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceE
Confidence 459999999999999999875 46679999997653 455667899999999999999999999999874 568
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
++||||+++++|.+++... .+++..++.++.||+.||.|||+++ |+|+||||+||||+.++.+||+|||++.....
T Consensus 111 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH~~~--ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 111 QLVMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHAQH--YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp EEEECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EEEEecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 9999999999999999764 4899999999999999999999999 99999999999999999999999999986544
Q ss_pred cc---ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH--------------HHHHhhcc
Q 003978 658 TY---LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ--------------VIGAVGFM 720 (782)
Q Consensus 658 ~~---~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~--------------~~~~i~~~ 720 (782)
.. .......||+.|+|||++.+..++.++|||||||++|+|++|..||....... ........
T Consensus 187 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (318)
T 3lxp_A 187 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER 266 (318)
T ss_dssp TCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred cccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhc
Confidence 32 12334568889999999999889999999999999999999999997543211 01111122
Q ss_pred ccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 721 NQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 721 ~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
......+..+++++.+||.+||..||.+|||+.++++.|+++...|-...+
T Consensus 267 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~~p 317 (318)
T 3lxp_A 267 GERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAP 317 (318)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC---
T ss_pred ccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccCCC
Confidence 334566788999999999999999999999999999999999988865443
No 144
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.9e-42 Score=366.56 Aligned_cols=254 Identities=25% Similarity=0.454 Sum_probs=215.4
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEcC---------CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeee
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWYG---------SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAV 571 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~~---------~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~ 571 (782)
++..++|++.+.||+|+||.||+|.+.. ..||+|++.... ....+.+.+|+.+++.++||||+++++++
T Consensus 4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 81 (289)
T 4fvq_A 4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH--RNYSESFFEAASMMSKLSHKHLVLNYGVC 81 (289)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG--GGGHHHHHHHHHHHHTSCCTTBCCEEEEE
T ss_pred EechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEEE
Confidence 3456799999999999999999998743 459999986543 23346788999999999999999999999
Q ss_pred ecCCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc--------
Q 003978 572 TSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT-------- 643 (782)
Q Consensus 572 ~~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~-------- 643 (782)
..++..|+|||||++++|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++.
T Consensus 82 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 82 VCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENT--LIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp CCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred EeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCC--eECCCcCcceEEEecCCcccccccce
Confidence 9999999999999999999999887767999999999999999999999999 999999999999998877
Q ss_pred EEEEecCCCcccccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccc
Q 003978 644 VKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMN 721 (782)
Q Consensus 644 vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~ 721 (782)
+||+|||++....... ...||+.|+|||++.+ ..++.++|||||||++|+|++ +.+||............ .
T Consensus 160 ~kl~Dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~---~ 232 (289)
T 4fvq_A 160 IKLSDPGISITVLPKD----ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY---E 232 (289)
T ss_dssp EEECCCCSCTTTSCHH----HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH---H
T ss_pred eeeccCcccccccCcc----ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHh---h
Confidence 9999999987544322 2346889999999987 678999999999999999999 46666665554433322 3
Q ss_pred cccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003978 722 QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 765 (782)
Q Consensus 722 ~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~ 765 (782)
....++...++++.+||.+||..||.+|||+.+++++|+++..+
T Consensus 233 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 233 DRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp TTCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred ccCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 35566777889999999999999999999999999999887553
No 145
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.4e-41 Score=390.88 Aligned_cols=259 Identities=33% Similarity=0.588 Sum_probs=226.6
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
..+++...+|++.++||+|+||.||+|.+. +..||||+++..... .+.+.+|+.+|+.++|||||++++++....
T Consensus 213 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 289 (495)
T 1opk_A 213 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREP 289 (495)
T ss_dssp SCCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred cccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccc---hHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 346777889999999999999999999986 678999999765433 467889999999999999999999999999
Q ss_pred ceeEEEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
.+|||||||.+|+|.+++... ...+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+++.
T Consensus 290 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 367 (495)
T 1opk_A 290 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENHLVKVADFGLSRL 367 (495)
T ss_dssp SCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECGGGCEEECCTTCEEC
T ss_pred cEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChhhEEECCCCcEEEeeccccee
Confidence 999999999999999999763 345899999999999999999999999 99999999999999999999999999986
Q ss_pred ccccc-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCH
Q 003978 655 KHETY-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDP 732 (782)
Q Consensus 655 ~~~~~-~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~ 732 (782)
..... .......+++.|+|||++.+..++.++|||||||+||||++ |..||...+..+....+. ...+...+..+++
T Consensus 368 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 446 (495)
T 1opk_A 368 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEGCPE 446 (495)
T ss_dssp CTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH-TTCCCCCCTTCCH
T ss_pred ccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCH
Confidence 54332 22233456789999999999889999999999999999999 999999888776665553 3345667888999
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 733 RWAAIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 733 ~l~~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
++.+||.+||..||.+|||+.+|++.|+.+
T Consensus 447 ~l~~li~~cl~~dP~~RPs~~el~~~L~~~ 476 (495)
T 1opk_A 447 KVYELMRACWQWNPSDRPSFAEIHQAFETM 476 (495)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 999999999999999999999999988765
No 146
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3e-41 Score=360.06 Aligned_cols=259 Identities=30% Similarity=0.567 Sum_probs=220.4
Q ss_pred ceeEeeeeccCCcEEEEEEEEc--CC---eEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce-eE
Q 003978 506 DLTIGEQIGQGSCGTVYHAVWY--GS---DVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL-CI 579 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~~--~~---~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~-~l 579 (782)
.|.+.++||+|+||.||+|.+. +. .||+|++.... .....+.+.+|+.+++.++||||+++++++...+.. ++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 100 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT-EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV 100 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc-cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence 6778899999999999999873 22 58999986533 445667889999999999999999999999876665 99
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
+|||+.+++|.+++......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 101 v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK--FVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp EECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 99999999999999876777999999999999999999999999 9999999999999999999999999997543321
Q ss_pred ----ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHH
Q 003978 660 ----LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 734 (782)
Q Consensus 660 ----~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l 734 (782)
.......+|+.|+|||.+.+..++.++|||||||++|+|++ |.+||...+.......+. .......+..+++.+
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l 257 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLA-QGRRLPQPEYCPDSL 257 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHH-TTCCCCCCTTCCHHH
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhh-cCCCCCCCccchHHH
Confidence 22234467899999999999999999999999999999999 556666666655554443 333456677899999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003978 735 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 768 (782)
Q Consensus 735 ~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~ 768 (782)
.+||.+||..||.+|||+.++++.|+++...+..
T Consensus 258 ~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~ 291 (298)
T 3pls_A 258 YQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291 (298)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999887654
No 147
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.3e-41 Score=363.40 Aligned_cols=252 Identities=33% Similarity=0.574 Sum_probs=204.1
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHh--CCCCceeEEeeeeec----CC
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKR--LRHPNVLLFMGAVTS----PQ 575 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~--l~HpnIv~l~~~~~~----~~ 575 (782)
...++|++.+.||+|+||.||+|.+.++.||||++.... ...+.+|.+++.. ++||||+++++++.. ..
T Consensus 5 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~ 79 (301)
T 3q4u_A 5 TVARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRD-----EKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79 (301)
T ss_dssp CCGGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGGG-----HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred cccCcEEEEEeeccCCCcEEEEEEECCEEEEEEEecccc-----chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence 456799999999999999999999999999999986532 2445667777777 789999999998643 34
Q ss_pred ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhh--------cCCCCeeecCCCCCcEEEcCCCcEEEE
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLH--------HCNPPIIHRDLKSSNLLVDKHWTVKVG 647 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH--------~~~~~ivHrDIKp~NILl~~~~~vkL~ 647 (782)
.+|+||||+++++|.+++.. ..+++..++.++.||+.||.||| +++ |+||||||+||||+.++.+||+
T Consensus 80 ~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dlkp~Nill~~~~~~kl~ 155 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA--IAHRDLKSKNILVKKNGQCCIA 155 (301)
T ss_dssp EEEEEECCCTTCBHHHHHTT--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE--EECSCCCGGGEEECTTSCEEEC
T ss_pred eeEEehhhccCCCHHHHHhh--cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC--eecCCCChHhEEEcCCCCEEEe
Confidence 58999999999999999964 36899999999999999999999 888 9999999999999999999999
Q ss_pred ecCCCccccccccc----ccCCCCCCcccCcccccCC------CCCchhHHHHHHHHHHHHHcC----------CCCCCC
Q 003978 648 DFGLSRLKHETYLT----TKTGKGTPQWMAPEVLRNE------PSDEKSDVYSFGVILWELATE----------KIPWDN 707 (782)
Q Consensus 648 DFGla~~~~~~~~~----~~~~~Gt~~y~aPE~l~~~------~~s~~sDIwSLG~ll~elltG----------~~Pf~~ 707 (782)
|||+++........ .....||+.|+|||++.+. .++.++|||||||++|+|++| ..||..
T Consensus 156 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~ 235 (301)
T 3q4u_A 156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD 235 (301)
T ss_dssp CCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred eCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccc
Confidence 99999754433221 2334799999999999876 345689999999999999999 888865
Q ss_pred CCh----HHHHHH-hhccccccCCCC-----CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 708 LNS----MQVIGA-VGFMNQRLEIPK-----DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 708 ~~~----~~~~~~-i~~~~~~~~~p~-----~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
... ...... +......+.++. .+++++.+||.+||..||.+|||+.++++.|++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 236 VVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 321 222222 222222333332 2457899999999999999999999999999876
No 148
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.2e-41 Score=361.78 Aligned_cols=261 Identities=34% Similarity=0.547 Sum_probs=216.1
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEc---CC--eEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWY---GS--DVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP 574 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~---~~--~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~ 574 (782)
.+..++|++++.||+|+||.||+|.+. +. .||||+++.... .....+.+.+|+++++.++||||+++++++..+
T Consensus 14 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 93 (291)
T 1u46_A 14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP 93 (291)
T ss_dssp ECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred ccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC
Confidence 344578999999999999999999863 22 489999876543 335667899999999999999999999999876
Q ss_pred CceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 575 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 575 ~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
. .++||||+.+++|.+++......+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.+||+|||++..
T Consensus 94 ~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 94 P-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp S-CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred C-ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCC--cccCCCchheEEEcCCCCEEEcccccccc
Confidence 4 89999999999999999876667999999999999999999999998 99999999999999999999999999976
Q ss_pred cccccc---cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCC
Q 003978 655 KHETYL---TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDV 730 (782)
Q Consensus 655 ~~~~~~---~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~ 730 (782)
...... ......+|+.|+|||++.+..++.++|||||||++|+|++ |..||...+.......+.........+..+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 250 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTC
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCc
Confidence 543321 2234467889999999998888999999999999999999 999999998888777776555566677889
Q ss_pred CHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 731 DPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 731 ~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
+.++.++|.+||..||.+|||+.++++.|.+++.
T Consensus 251 ~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 251 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 9999999999999999999999999999988754
No 149
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.3e-41 Score=363.31 Aligned_cols=263 Identities=25% Similarity=0.373 Sum_probs=217.4
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
.++|++.+.||+|+||.||+|.+. ++.||||++............+.+|+.+++.++||||+++++++..++.+|+||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 468999999999999999999984 778999998765444444467888999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc
Q 003978 582 EFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 660 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 660 (782)
||+. ++|.+++.... ..+++..++.++.||+.||.|||++| |+|+||||+||+++.++.+||+|||++........
T Consensus 82 e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 158 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158 (299)
T ss_dssp ECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred Eccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence 9996 59999997643 46889999999999999999999999 99999999999999999999999999876554433
Q ss_pred cccCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc----------------
Q 003978 661 TTKTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR---------------- 723 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~~~~-~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~---------------- 723 (782)
......||+.|+|||++.+.. ++.++|||||||++|+|++|..||...+.......+......
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (299)
T 2r3i_A 159 TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238 (299)
T ss_dssp CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccc
Confidence 344557899999999998765 789999999999999999999999988776655444221110
Q ss_pred cCC-----------CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcCC
Q 003978 724 LEI-----------PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVG 775 (782)
Q Consensus 724 ~~~-----------p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~~ 775 (782)
..+ ...++.++.+||.+||..||++|||+.++ +.|+||+.....+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~------l~hp~~~~~~~~~~ 295 (299)
T 2r3i_A 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA------LAHPFFQDVTKPVP 295 (299)
T ss_dssp TTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHH------HTSGGGTTCCCCCC
T ss_pred hhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHH------hcChhhhcCCCCCC
Confidence 011 13478999999999999999999999999 67899998776553
No 150
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.7e-41 Score=359.53 Aligned_cols=259 Identities=24% Similarity=0.396 Sum_probs=219.0
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCH----HHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSD----EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~----~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
.++|++++.||+|+||.||++.+. ++.||+|+++...... ...+.+.+|+.+++.++||||+++++++.....+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 468999999999999999999985 7789999998654322 1246788999999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC----cEEEEecCCCc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW----TVKVGDFGLSR 653 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~----~vkL~DFGla~ 653 (782)
++||||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+|+||||+||+++.++ .+||+|||++.
T Consensus 84 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 9999999999999999764 46899999999999999999999998 99999999999998877 89999999997
Q ss_pred ccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc--cCCCCCCC
Q 003978 654 LKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR--LEIPKDVD 731 (782)
Q Consensus 654 ~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~--~~~p~~~~ 731 (782)
...... ......|++.|+|||++.+..++.++|||||||++|+|++|..||...........+...... ...+..++
T Consensus 161 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (283)
T 3bhy_A 161 KIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTS 239 (283)
T ss_dssp ECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCC
T ss_pred eccCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCC
Confidence 654432 223457899999999999999999999999999999999999999988877766655432221 22335789
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 732 PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 732 ~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
..+.+||.+||..||.+||++.++ +.|+||+..+.
T Consensus 240 ~~~~~li~~~l~~dp~~Rps~~~~------l~h~~~~~~~~ 274 (283)
T 3bhy_A 240 ELAKDFIRRLLVKDPKRRMTIAQS------LEHSWIKAIRR 274 (283)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHH------HHCHHHHHHHH
T ss_pred HHHHHHHHHHccCCHhHCcCHHHH------HhCHHHHHHHH
Confidence 999999999999999999999999 56788876543
No 151
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.6e-41 Score=374.50 Aligned_cols=263 Identities=17% Similarity=0.230 Sum_probs=209.4
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEc-------CCeEEEEEEeccCCCH----HHH-----HHHHHHHHHHHhCCCCce
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWY-------GSDVAVKVFSRQEYSD----EVI-----HSFRQEVSLMKRLRHPNV 564 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~-------~~~vAiK~~~~~~~~~----~~~-----~~~~~Ei~il~~l~HpnI 564 (782)
+...++|+++++||+|+||.||+|.+. ++.||||++....... ... ..+..|+..+..++||||
T Consensus 31 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~i 110 (364)
T 3op5_A 31 DMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGV 110 (364)
T ss_dssp CTTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCS
T ss_pred ccCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCC
Confidence 455679999999999999999999874 3679999987653210 000 123345566777889999
Q ss_pred eEEeeeeecC----CceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc-
Q 003978 565 LLFMGAVTSP----QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD- 639 (782)
Q Consensus 565 v~l~~~~~~~----~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~- 639 (782)
+++++++... ..+||||||| +++|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+
T Consensus 111 v~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 111 PKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHE--YVHGDIKASNLLLNY 187 (364)
T ss_dssp CCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEES
T ss_pred CeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eEEecCCHHHEEEec
Confidence 9999998764 4589999999 99999999887678999999999999999999999998 99999999999999
Q ss_pred -CCCcEEEEecCCCccccccccc-------ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH
Q 003978 640 -KHWTVKVGDFGLSRLKHETYLT-------TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM 711 (782)
Q Consensus 640 -~~~~vkL~DFGla~~~~~~~~~-------~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~ 711 (782)
.++.+||+|||+++........ .....||+.|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 8899999999999765432211 12345999999999999999999999999999999999999999854322
Q ss_pred HHHHHhhccc---------cccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 712 QVIGAVGFMN---------QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 712 ~~~~~i~~~~---------~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
.......... ........++.++.+||..||..||.+||++.+|++.|.++....
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~ 331 (364)
T 3op5_A 268 PKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI 331 (364)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence 2211111000 011123678999999999999999999999999999999887653
No 152
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-41 Score=372.53 Aligned_cols=260 Identities=23% Similarity=0.284 Sum_probs=213.2
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCC---HHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYS---DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
..++|++++.||+|+||.||+|.+. ++.||||++...... ......+.+|+.+++.++||||+++++++.....+
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 4578999999999999999999974 778999998754322 12234678899999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
++||||+++ +|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++....
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW--ILHRDLKPNNLLLDENGVLKLADFGLAKSFGS 164 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECCCGGGSTTTS
T ss_pred EEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC--EECCCCCHHHEEEcCCCCEEEEecccceeccC
Confidence 999999975 999999877777899999999999999999999999 99999999999999999999999999987655
Q ss_pred ccccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc------------
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL------------ 724 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~------------ 724 (782)
.........||+.|+|||++.+. .++.++|||||||++|+|++|.+||...+....+..+......+
T Consensus 165 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 244 (346)
T 1ua2_A 165 PNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP 244 (346)
T ss_dssp CCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSST
T ss_pred CcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCc
Confidence 44444556899999999999764 47899999999999999999999999888776655543211100
Q ss_pred --------------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 725 --------------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 725 --------------~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
.+...++.++.+||.+||..||.+|||+.++ |+|+||+...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el------l~h~~f~~~~ 299 (346)
T 1ua2_A 245 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQA------LKMKYFSNRP 299 (346)
T ss_dssp TCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHH------HTSGGGTSSS
T ss_pred ccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHH------hcChhhhcCC
Confidence 0114567899999999999999999999999 6789997654
No 153
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.1e-41 Score=367.44 Aligned_cols=265 Identities=31% Similarity=0.456 Sum_probs=217.7
Q ss_pred cccceeEeeeeccCCcEEEEEEEE------cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeee--cC
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW------YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT--SP 574 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~------~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~--~~ 574 (782)
..++|++++.||+|+||.||+|.+ .+..||||++... .....+.+.+|+++++.++||||+++++++. ..
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 98 (327)
T 3lxl_A 21 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR 98 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSS
T ss_pred chhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC--CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCC
Confidence 357999999999999999999985 4567999998654 3455677899999999999999999999886 45
Q ss_pred CceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 575 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 575 ~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
..+|+||||+++++|.+++......+++..++.++.||+.||.|||+++ |+|+||||+||||+.++.+||+|||++..
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 176 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR--CVHRDLAARNILVESEAHVKIADFGLAKL 176 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred ceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCChhhEEECCCCCEEEccccccee
Confidence 6689999999999999999876667999999999999999999999998 99999999999999999999999999986
Q ss_pred ccccc---ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH--------------HHHHHh
Q 003978 655 KHETY---LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM--------------QVIGAV 717 (782)
Q Consensus 655 ~~~~~---~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~--------------~~~~~i 717 (782)
..... .......||+.|+|||++.+..++.++|||||||++|+|++|..||...... ......
T Consensus 177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (327)
T 3lxl_A 177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL 256 (327)
T ss_dssp CCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHH
T ss_pred cccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 54322 1233456889999999999998999999999999999999999998654322 111112
Q ss_pred hccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 718 GFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 718 ~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
.........+..+++++.+||.+||..||.+|||+.+++++|+.+......+..
T Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~ 310 (327)
T 3lxl_A 257 LEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCET 310 (327)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---------
T ss_pred hhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCccc
Confidence 222334566788999999999999999999999999999999988766554443
No 154
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.6e-41 Score=358.37 Aligned_cols=259 Identities=25% Similarity=0.499 Sum_probs=215.2
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCC-HHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
....++|++++.||+|+||.||+|.+. ++.||||++...... .+....+.+|+.+++.++||||+++++++.....+
T Consensus 7 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 86 (276)
T 2h6d_A 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDF 86 (276)
T ss_dssp CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred cceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeE
Confidence 345679999999999999999999984 788999999754321 12346788999999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
|+||||+++++|.+++.... .+++..++.++.||+.||.|||+++ |+|+||||+||+++.++.+||+|||++.....
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 87 FMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp EEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHHC--SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred EEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 99999999999999997653 5899999999999999999999999 99999999999999999999999999876544
Q ss_pred ccccccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHH
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA 736 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~~~-s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~ 736 (782)
.. ......||+.|+|||++.+..+ +.++|||||||++|+|++|..||...........+. .....++..++..+.+
T Consensus 164 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~ 240 (276)
T 2h6d_A 164 GE-FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIR--GGVFYIPEYLNRSVAT 240 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HCCCCCCTTSCHHHHH
T ss_pred Cc-ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhh--cCcccCchhcCHHHHH
Confidence 32 2234578999999999988766 689999999999999999999999887766665553 2344567789999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 737 IVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 737 LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
||.+||..||.+|||+.++ +.|+||+...
T Consensus 241 li~~~l~~~p~~Rps~~~~------l~h~~~~~~~ 269 (276)
T 2h6d_A 241 LLMHMLQVDPLKRATIKDI------REHEWFKQDL 269 (276)
T ss_dssp HHHHHTCSSGGGSCCHHHH------HHSHHHHTTC
T ss_pred HHHHHccCChhhCCCHHHH------HhChhhccCc
Confidence 9999999999999999999 5689997643
No 155
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=6.7e-42 Score=370.09 Aligned_cols=254 Identities=24% Similarity=0.357 Sum_probs=204.0
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC------
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ------ 575 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------ 575 (782)
.++|++++.||+|+||.||+|.+ .++.||||+++... .....+.+.+|+++|+.++|||||++++++....
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 46899999999999999999998 47789999997654 3334577899999999999999999999885443
Q ss_pred ---------------------------------------------------ceeEEEeecCCCCHHHHHhhcCC--cchH
Q 003978 576 ---------------------------------------------------RLCIVTEFLPRGSLFRLLQRNTT--KLDW 602 (782)
Q Consensus 576 ---------------------------------------------------~~~lv~E~~~ggsL~~~l~~~~~--~l~~ 602 (782)
.+|+|||||++++|.+++..... ..++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 27999999999999999976432 2455
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc------------ccccCCCCCCc
Q 003978 603 RRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY------------LTTKTGKGTPQ 670 (782)
Q Consensus 603 ~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~------------~~~~~~~Gt~~ 670 (782)
..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++...... .......||+.
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHHhCC--eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 678899999999999999999 9999999999999999999999999998655432 12234579999
Q ss_pred ccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCC
Q 003978 671 WMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRP 750 (782)
Q Consensus 671 y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RP 750 (782)
|+|||++.+..++.++|||||||++|+|++|..|+... ......+. ....+..+...++++.+||.+||..||.+||
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 318 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER--VRIITDVR-NLKFPLLFTQKYPQEHMMVQDMLSPSPTERP 318 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH--HHHHHHHH-TTCCCHHHHHHCHHHHHHHHHHHCSSGGGSC
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH--HHHHHHhh-ccCCCcccccCChhHHHHHHHHccCCCCcCC
Confidence 99999999999999999999999999999987765321 11111111 1111112234568899999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhhc
Q 003978 751 SFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 751 s~~ell~~L~~L~~~~~~~ 769 (782)
|+.++ ++|+||+.
T Consensus 319 s~~~~------l~~~~f~~ 331 (332)
T 3qd2_B 319 EATDI------IENAIFEN 331 (332)
T ss_dssp CHHHH------HHSTTCCC
T ss_pred CHHHH------hhchhhhc
Confidence 99999 67888875
No 156
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=5e-42 Score=372.46 Aligned_cols=258 Identities=28% Similarity=0.487 Sum_probs=216.5
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCe----EEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSD----VAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~----vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
...++|+++++||+|+||.||+|.+. +.. ||+|++..... ......+.+|+.+++.++||||+++++++. ..
T Consensus 10 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~ 87 (325)
T 3kex_A 10 FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG-RQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GS 87 (325)
T ss_dssp CCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS-CSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BS
T ss_pred cCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CC
Confidence 34578999999999999999999974 343 77777654321 122345667999999999999999999886 56
Q ss_pred ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
..++||||+.+++|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++..
T Consensus 88 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 88 SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG--MVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp SEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTT--CCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred ccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCC--CCCCccchheEEECCCCeEEECCCCccccc
Confidence 789999999999999999876667999999999999999999999999 999999999999999999999999999865
Q ss_pred cccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCH
Q 003978 656 HETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDP 732 (782)
Q Consensus 656 ~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~ 732 (782)
.... .......||+.|+|||++.+..++.++|||||||++|+|++ |..||...........+. .......+..++.
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 244 (325)
T 3kex_A 166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE-KGERLAQPQICTI 244 (325)
T ss_dssp CCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHH-TTCBCCCCTTBCT
T ss_pred CcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHH-cCCCCCCCCcCcH
Confidence 4332 12234567889999999999999999999999999999999 999999887766665553 3345566778899
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 733 RWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 733 ~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
++.+||.+||..||.+||++.++++.|+++..
T Consensus 245 ~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 245 DVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp TTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999999999998854
No 157
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2.4e-41 Score=371.95 Aligned_cols=260 Identities=23% Similarity=0.369 Sum_probs=218.7
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
++..++|++.+.||+|+||.||++.+. +..||+|++.... .......+.+|+.+++.++||||+++++++..++.+|
T Consensus 29 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 107 (360)
T 3eqc_A 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 107 (360)
T ss_dssp CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEE
T ss_pred ccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc-CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEE
Confidence 445679999999999999999999985 7789999997653 4556678999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcC-CCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC-NPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~-~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
+|||||++++|.+++.... .+++..++.++.||+.||.|||+. + |+|+||||+||||+.++.+||+|||++.....
T Consensus 108 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 108 ICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp EEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHHC--CCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred EEEECCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHhCC--EEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 9999999999999997653 689999999999999999999985 8 99999999999999999999999999975433
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhh-------------------
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVG------------------- 718 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~------------------- 718 (782)
. ......||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+.
T Consensus 185 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (360)
T 3eqc_A 185 S--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 262 (360)
T ss_dssp H--C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------
T ss_pred c--cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCC
Confidence 2 2234578999999999999999999999999999999999999998776544322211
Q ss_pred -----------------------ccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 719 -----------------------FMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 719 -----------------------~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
...........++.++.+||.+||..||.+|||+.++ |+|+||+....
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el------l~hp~~~~~~~ 333 (360)
T 3eqc_A 263 PLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL------MVHAFIKRSDA 333 (360)
T ss_dssp -----------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHH------HTSHHHHHHHH
T ss_pred cccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHH------hhChHhhcchH
Confidence 0111111223478999999999999999999999999 67899976543
No 158
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3e-41 Score=363.56 Aligned_cols=253 Identities=33% Similarity=0.623 Sum_probs=209.5
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
+..++|++.+.||+|+||.||++.+.++.||||++... ...+.+.+|+++++.++||||+++++++. +..|+||
T Consensus 5 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~ 78 (307)
T 2eva_A 5 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVM 78 (307)
T ss_dssp CCGGGEEEEEEEECCSSSEEEEEEETTEEEEEEECSST----THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEE
T ss_pred CCHhHeeeeeEeecCCCceEEEEEECCeeEEEEEecCh----hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEE
Confidence 34578999999999999999999999999999998643 23467889999999999999999999887 4589999
Q ss_pred eecCCCCHHHHHhhcCC--cchHHHHHHHHHHHHHHHHhhhc---CCCCeeecCCCCCcEEEcCCCc-EEEEecCCCccc
Q 003978 582 EFLPRGSLFRLLQRNTT--KLDWRRRILMALDIARGVSYLHH---CNPPIIHRDLKSSNLLVDKHWT-VKVGDFGLSRLK 655 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~--~l~~~~~~~i~~qll~aL~~LH~---~~~~ivHrDIKp~NILl~~~~~-vkL~DFGla~~~ 655 (782)
||+++++|.+++..... .+++..++.++.|++.||.|||+ ++ |+||||||+||||+.++. +||+|||++...
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~--ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~ 156 (307)
T 2eva_A 79 EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA--LIHRDLKPPNLLLVAGGTVLKICDFGTACDI 156 (307)
T ss_dssp ECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSC--CCCCCCSGGGEEEETTTTEEEECCCCC----
T ss_pred EcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCC--eecCCCChhHEEEeCCCCEEEEccccccccc
Confidence 99999999999976432 36788999999999999999999 67 999999999999998886 799999999754
Q ss_pred ccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH--HHHHHhhccccccCCCCCCCHH
Q 003978 656 HETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM--QVIGAVGFMNQRLEIPKDVDPR 733 (782)
Q Consensus 656 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~--~~~~~i~~~~~~~~~p~~~~~~ 733 (782)
.... ....||+.|+|||++.+..++.++|||||||++|+|++|..||...... .....+ ........+..++..
T Consensus 157 ~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 232 (307)
T 2eva_A 157 QTHM---TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAV-HNGTRPPLIKNLPKP 232 (307)
T ss_dssp -----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHH-HTTCCCCCBTTCCHH
T ss_pred cccc---ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHH-hcCCCCCcccccCHH
Confidence 4321 2346899999999999999999999999999999999999999865432 222222 233455667789999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 734 WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 734 l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
+.+||.+||..||.+|||+.++++.|+.+...+
T Consensus 233 l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 233 IESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999886544
No 159
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=4.1e-41 Score=360.68 Aligned_cols=256 Identities=31% Similarity=0.520 Sum_probs=223.5
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
.+.|++++.||+|+||.||+|.+ .++.||||++...... .....+.+|+.+++.++||||+++++++.....+|+||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 99 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 99 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS-TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH-HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 35799999999999999999987 4678999999765432 23567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
||+++++|.+++.. ..+++..++.++.||+.||.|||+++ |+|+||||+||+|+.++.+||+|||++.........
T Consensus 100 e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 175 (303)
T 3a7i_A 100 EYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEK--KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 175 (303)
T ss_dssp ECCTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCC
T ss_pred EeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCChheEEECCCCCEEEeecccceecCccccc
Confidence 99999999999975 46899999999999999999999999 999999999999999999999999999876554444
Q ss_pred ccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHh
Q 003978 662 TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESC 741 (782)
Q Consensus 662 ~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~c 741 (782)
.....||+.|+|||++.+..++.++|||||||++|+|++|..||...........+.. .....++..++..+.+||.+|
T Consensus 176 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~ 254 (303)
T 3a7i_A 176 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK-NNPPTLEGNYSKPLKEFVEAC 254 (303)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-SCCCCCCSSCCHHHHHHHHHH
T ss_pred cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhc-CCCCCCccccCHHHHHHHHHH
Confidence 4566799999999999999999999999999999999999999998887766655432 234456778999999999999
Q ss_pred hhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 742 WHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 742 L~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
|..||.+|||+.++ +.|+||+...
T Consensus 255 l~~dp~~Rps~~~l------l~~~~~~~~~ 278 (303)
T 3a7i_A 255 LNKEPSFRPTAKEL------LKHKFILRNA 278 (303)
T ss_dssp CCSSGGGSCCHHHH------TTCHHHHHHC
T ss_pred cCCChhhCcCHHHH------hhChhhhcCC
Confidence 99999999999999 5567775443
No 160
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=8.1e-42 Score=371.41 Aligned_cols=252 Identities=24% Similarity=0.422 Sum_probs=193.1
Q ss_pred ccceeEe---eeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCce
Q 003978 504 WEDLTIG---EQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 504 ~~~y~i~---~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~ 577 (782)
.++|.+. ++||+|+||.||+|.+. ++.||||++.... ...+.+|+.+++.+. ||||+++++++......
T Consensus 7 ~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~ 81 (325)
T 3kn6_A 7 YQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM-----EANTQKEITALKLCEGHPNIVKLHEVFHDQLHT 81 (325)
T ss_dssp HHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGGG-----HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred hhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChhh-----hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEE
Confidence 3566664 78999999999999984 6789999997542 356678999999997 99999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC---cEEEEecCCCcc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW---TVKVGDFGLSRL 654 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~---~vkL~DFGla~~ 654 (782)
|+|||||++++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++ .+||+|||+++.
T Consensus 82 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 158 (325)
T 3kn6_A 82 FLVMELLNGGELFERIKKK-KHFSETEASYIMRKLVSAVSHMHDVG--VVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158 (325)
T ss_dssp EEEECCCCSCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEEC----CEEEECCCTTCEE
T ss_pred EEEEEccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCHHHEEEecCCCcccEEEecccccee
Confidence 9999999999999999764 46999999999999999999999999 99999999999998765 899999999986
Q ss_pred cccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh-------HHHHHHhhccccccCCC
Q 003978 655 KHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS-------MQVIGAVGFMNQRLEIP 727 (782)
Q Consensus 655 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~-------~~~~~~i~~~~~~~~~p 727 (782)
...........+||+.|+|||++.+..++.++|||||||++|+|++|..||...+. ......+.. ....++
T Consensus 159 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~--~~~~~~ 236 (325)
T 3kn6_A 159 KPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKK--GDFSFE 236 (325)
T ss_dssp CCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTT--TCCCCC
T ss_pred cCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHc--CCCCCC
Confidence 65544444566789999999999999999999999999999999999999976543 233333322 122222
Q ss_pred ----CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 728 ----KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 728 ----~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
..+++++++||.+||..||.+|||+.++ ++|+||+...
T Consensus 237 ~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~el------l~h~w~~~~~ 278 (325)
T 3kn6_A 237 GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGL------RYNEWLQDGS 278 (325)
T ss_dssp SHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTS------TTCGGGCTTC
T ss_pred cccccCCCHHHHHHHHHHCCCChhHCCCHHHH------hcChhhccCc
Confidence 3589999999999999999999999999 6789997653
No 161
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.1e-41 Score=358.21 Aligned_cols=251 Identities=22% Similarity=0.339 Sum_probs=212.3
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCceeEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lv 580 (782)
.++|++++.||+|+||.||+|.+. ++.||||++............+.+|+.++..+ +||||+++++++..++.+|+|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 468999999999999999999984 78899999987665555567788999999999 899999999999999999999
Q ss_pred EeecCCCCHHHHHhhcC---CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC----------------
Q 003978 581 TEFLPRGSLFRLLQRNT---TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH---------------- 641 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~---~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~---------------- 641 (782)
|||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~ 167 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWA 167 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEC------------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC--EeecCCCHHHEEEcCCCCCccccccccccccc
Confidence 99999999999997542 45899999999999999999999999 9999999999999844
Q ss_pred ---CcEEEEecCCCcccccccccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHh
Q 003978 642 ---WTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAV 717 (782)
Q Consensus 642 ---~~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i 717 (782)
..+||+|||++...... ....||+.|+|||++.+. .++.++|||||||++|+|++|..|+....... .+
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~---~~ 240 (289)
T 1x8b_A 168 SNKVMFKIGDLGHVTRISSP----QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWH---EI 240 (289)
T ss_dssp --CCCEEECCCTTCEETTCS----CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHH---HH
T ss_pred CCceEEEEcccccccccCCc----cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHH---HH
Confidence 47999999999765443 234689999999999876 55679999999999999999998876543322 22
Q ss_pred hccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 718 GFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 718 ~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
. ......++..+++++.+||.+||..||.+|||+.++ ++|+||+..
T Consensus 241 ~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l------l~h~~~~~~ 286 (289)
T 1x8b_A 241 R-QGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMAL------VKHSVLLSA 286 (289)
T ss_dssp H-TTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHH------HTCTTC---
T ss_pred H-cCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHH------hhChHhhhh
Confidence 1 233456778899999999999999999999999999 678998764
No 162
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1e-41 Score=388.66 Aligned_cols=254 Identities=26% Similarity=0.364 Sum_probs=208.0
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC-----
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ----- 575 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----- 575 (782)
..++|+++++||+|+||.||+|.+ .++.||||++..........+.+.+|+.+|+.++|||||++++++....
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 357899999999999999999987 4678999999876656677788999999999999999999999996553
Q ss_pred -ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 576 -RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 576 -~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
.+|+|||||++ +|.+.+.. .+++..++.++.||+.||+|||++| |+||||||+||||+.++.+||+|||+++.
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH~~~--iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred CeEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 46999999965 67777753 4889999999999999999999999 99999999999999999999999999986
Q ss_pred cccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc----------
Q 003978 655 KHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL---------- 724 (782)
Q Consensus 655 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~---------- 724 (782)
..... .....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+......+
T Consensus 214 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~ 292 (464)
T 3ttj_A 214 AGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 292 (464)
T ss_dssp ---CC-CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCH
T ss_pred cCCCc-ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcch
Confidence 65432 2335689999999999999999999999999999999999999999887766554442211100
Q ss_pred ----------C---------CCCC-----------CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 725 ----------E---------IPKD-----------VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 725 ----------~---------~p~~-----------~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
. ++.. .++++.+||.+||..||++|||+.++ |+|+||+.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~------L~Hp~~~~ 361 (464)
T 3ttj_A 293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA------LQHPYINV 361 (464)
T ss_dssp HHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHH------HTSTTTGG
T ss_pred hhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHH------hcChhhhh
Confidence 0 0000 15679999999999999999999999 67899974
No 163
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=369.45 Aligned_cols=258 Identities=28% Similarity=0.527 Sum_probs=214.4
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCe----EEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSD----VAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~----vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
...++|+++++||+|+||.||+|.+. ++. |++|.+.... .......+.+|+.+++.++||||+++++++....
T Consensus 12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 90 (327)
T 3lzb_A 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90 (327)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS-SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS
T ss_pred cCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC
Confidence 44578999999999999999999973 444 4666664332 2233467889999999999999999999998754
Q ss_pred ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
.++||||+.+++|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++..
T Consensus 91 -~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~ 167 (327)
T 3lzb_A 91 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp -EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred -ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC--CcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence 78999999999999999887778999999999999999999999999 999999999999999999999999999865
Q ss_pred cccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCH
Q 003978 656 HETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDP 732 (782)
Q Consensus 656 ~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~ 732 (782)
.... .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||...........+. .......+..++.
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 246 (327)
T 3lzb_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-KGERLPQPPICTI 246 (327)
T ss_dssp ------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-TTCCCCCCTTBCH
T ss_pred cCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-cCCCCCCCccCCH
Confidence 4322 22234457889999999999999999999999999999999 999999887776655543 3345566788999
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 733 RWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 733 ~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
++.+||.+||..||.+||++.++++.|.++..
T Consensus 247 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 247 DVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999974
No 164
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=361.82 Aligned_cols=266 Identities=28% Similarity=0.479 Sum_probs=217.1
Q ss_pred cccccccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC
Q 003978 497 CLDYEILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP 574 (782)
Q Consensus 497 ~~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~ 574 (782)
...+....++|.....||+|+||.||+|.+ .+..||||++.... ....+.+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 91 (295)
T 2clq_A 14 LLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--SRYSQPLHEEIALHKHLKHKNIVQYLGSFSEN 91 (295)
T ss_dssp CCCEEECBCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC--C---HHHHHHHHHHHTCCCTTBCCEEEEEEET
T ss_pred cccccccccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc--hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeC
Confidence 345555566777777999999999999998 46679999987653 23456788999999999999999999999999
Q ss_pred CceeEEEeecCCCCHHHHHhhcC--CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC-CCcEEEEecCC
Q 003978 575 QRLCIVTEFLPRGSLFRLLQRNT--TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-HWTVKVGDFGL 651 (782)
Q Consensus 575 ~~~~lv~E~~~ggsL~~~l~~~~--~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~-~~~vkL~DFGl 651 (782)
+.+++||||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+|+||||+||+|+. ++.+||+|||+
T Consensus 92 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~kl~Dfg~ 169 (295)
T 2clq_A 92 GFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ--IVHRDIKGDNVLINTYSGVLKISDFGT 169 (295)
T ss_dssp TEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEETTTCCEEECCTTT
T ss_pred CcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC--EEccCCChhhEEEECCCCCEEEeeccc
Confidence 99999999999999999997653 34568889999999999999999998 999999999999987 89999999999
Q ss_pred CcccccccccccCCCCCCcccCcccccCCC--CCchhHHHHHHHHHHHHHcCCCCCCCCChHH-HHHHhhccccccCCCC
Q 003978 652 SRLKHETYLTTKTGKGTPQWMAPEVLRNEP--SDEKSDVYSFGVILWELATEKIPWDNLNSMQ-VIGAVGFMNQRLEIPK 728 (782)
Q Consensus 652 a~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~--~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~-~~~~i~~~~~~~~~p~ 728 (782)
+..............||+.|+|||++.+.. ++.++|||||||++|+|++|..||....... .............++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 249 (295)
T 2clq_A 170 SKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPE 249 (295)
T ss_dssp CEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCT
T ss_pred ccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccc
Confidence 986554333344567999999999997644 7889999999999999999999997654332 2222222334556778
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 729 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 729 ~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
.+++++.+||.+||..||++||++.++ |.|+||+....
T Consensus 250 ~~~~~~~~li~~~l~~dp~~Rps~~~l------l~~~~~~~~~~ 287 (295)
T 2clq_A 250 SMSAEAKAFILKCFEPDPDKRACANDL------LVDEFLKVSSK 287 (295)
T ss_dssp TSCHHHHHHHHHTTCSSTTTSCCHHHH------HTSGGGCC---
T ss_pred cCCHHHHHHHHHHccCChhhCCCHHHH------hcChhhhhccc
Confidence 899999999999999999999999999 67899976543
No 165
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-41 Score=366.80 Aligned_cols=259 Identities=19% Similarity=0.357 Sum_probs=209.9
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC--ce
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ--RL 577 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~--~~ 577 (782)
...++|++.++||+|+||.||+|.+. ++.||||++...... .....+.+|+++|+.++||||+++++++.... .+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 84 (319)
T 4euu_A 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK 84 (319)
T ss_dssp CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG-SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred CCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceE
Confidence 34578999999999999999999985 778999999754422 12456778999999999999999999987655 78
Q ss_pred eEEEeecCCCCHHHHHhhcCC--cchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE----cCCCcEEEEecCC
Q 003978 578 CIVTEFLPRGSLFRLLQRNTT--KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV----DKHWTVKVGDFGL 651 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~--~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl----~~~~~vkL~DFGl 651 (782)
|+|||||++++|.+++..... .+++..++.++.||+.||.|||+++ |+||||||+|||| +.++.+||+|||+
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp EEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred EEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 999999999999999976433 3899999999999999999999999 9999999999999 7788899999999
Q ss_pred CcccccccccccCCCCCCcccCccccc--------CCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh----HHHHHHhhc
Q 003978 652 SRLKHETYLTTKTGKGTPQWMAPEVLR--------NEPSDEKSDVYSFGVILWELATEKIPWDNLNS----MQVIGAVGF 719 (782)
Q Consensus 652 a~~~~~~~~~~~~~~Gt~~y~aPE~l~--------~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~----~~~~~~i~~ 719 (782)
++...... ......||+.|+|||++. +..++.++|||||||++|+|++|..||..... ......+..
T Consensus 163 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (319)
T 4euu_A 163 ARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (319)
T ss_dssp CEECCTTC-CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred ceecCCCC-ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence 98655433 223457999999999986 57788999999999999999999999975432 222222211
Q ss_pred ccc-------------------c----cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 720 MNQ-------------------R----LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 720 ~~~-------------------~----~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
... . ..++..++..+.+||.+||..||++|||+.+++++..+-.|
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 110 0 01222345678999999999999999999999988776543
No 166
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=9.7e-42 Score=395.88 Aligned_cols=258 Identities=23% Similarity=0.329 Sum_probs=220.2
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCC-HHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
...++|++.+.||+|+||.||+|.+ .++.||||++.+.... ......+.+|+.+|+.++|||||++++++...+.+|
T Consensus 181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~ 260 (576)
T 2acx_A 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALC 260 (576)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEE
Confidence 4457899999999999999999998 4778999999764321 122356788999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
+|||||+||+|.+++.... ..+++..++.++.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+++....
T Consensus 261 lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g--IvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER--IVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp EEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 9999999999999997643 34899999999999999999999999 99999999999999999999999999986544
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh----HHHHHHhhccccccCCCCCCCHH
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS----MQVIGAVGFMNQRLEIPKDVDPR 733 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~----~~~~~~i~~~~~~~~~p~~~~~~ 733 (782)
.. .....+||+.|+|||++.+..++.++|||||||++|+|++|..||..... ......+ ......++..++++
T Consensus 339 ~~-~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i--~~~~~~~p~~~s~~ 415 (576)
T 2acx_A 339 GQ-TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV--KEVPEEYSERFSPQ 415 (576)
T ss_dssp TC-CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHH--HHCCCCCCTTSCHH
T ss_pred Cc-cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHh--hcccccCCccCCHH
Confidence 32 22345899999999999999999999999999999999999999987532 2333333 22345667889999
Q ss_pred HHHHHHHhhhhCCCCCC-----CHHHHHHHHHHHHHHHhhcc
Q 003978 734 WAAIVESCWHSDPQCRP-----SFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 734 l~~LI~~cL~~dP~~RP-----s~~ell~~L~~L~~~~~~~~ 770 (782)
+++||.+||..||.+|| ++.++ +.|+||+..
T Consensus 416 ~~dLI~~lL~~dP~~R~g~~~~sa~ei------l~HpfF~~i 451 (576)
T 2acx_A 416 ARSLCSQLLCKDPAERLGCRGGSAREV------KEHPLFKKL 451 (576)
T ss_dssp HHHHHHHHTCSSGGGSTTCSSSHHHHH------HTSGGGTTC
T ss_pred HHHHHHHhccCCHHHcCCCCCCCHHHH------HhChhhccC
Confidence 99999999999999999 78999 678999753
No 167
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=2.2e-41 Score=370.95 Aligned_cols=261 Identities=21% Similarity=0.290 Sum_probs=215.6
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec-------
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS------- 573 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~------- 573 (782)
..++|+++++||+|+||.||+|.+ .++.||||++............+.+|+.+++.++||||+++++++..
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 347899999999999999999998 47789999987665444444567789999999999999999999876
Q ss_pred -CCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCC
Q 003978 574 -PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLS 652 (782)
Q Consensus 574 -~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla 652 (782)
.+.+|+|||||.+ +|.+.+......+++..++.++.||+.||.|||++| |+||||||+||||+.++.+||+|||++
T Consensus 95 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 95 CKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp --CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 3468999999965 888888776677999999999999999999999999 999999999999999999999999999
Q ss_pred cccccc----cccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccC--
Q 003978 653 RLKHET----YLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE-- 725 (782)
Q Consensus 653 ~~~~~~----~~~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~-- 725 (782)
+..... ........||+.|+|||++.+ ..++.++|||||||++|+|++|..||...........+........
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 251 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence 764421 122234578999999999986 4579999999999999999999999998887766655532221111
Q ss_pred CCCC----------------------------CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 726 IPKD----------------------------VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 726 ~p~~----------------------------~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
..+. .++.+.+||.+||..||.+|||+.++ |+|+||+....
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~------l~hp~f~~~~~ 320 (351)
T 3mi9_A 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA------LNHDFFWSDPM 320 (351)
T ss_dssp TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHH------HTSGGGGSSSC
T ss_pred hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHH------hCCCCcCCCCC
Confidence 1011 26789999999999999999999999 67899976443
No 168
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=7.4e-42 Score=391.66 Aligned_cols=260 Identities=29% Similarity=0.435 Sum_probs=223.8
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCC-HHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
...++|++.++||+|+||.||+|.+ .++.||||++...... ......+.+|+.+|+.++|||||++++++...+.+|
T Consensus 23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 102 (484)
T 3nyv_A 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFY 102 (484)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred cccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 4457899999999999999999998 4778999999765432 233567889999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE---cCCCcEEEEecCCCccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV---DKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl---~~~~~vkL~DFGla~~~ 655 (782)
+|||||.+++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||| +.++.+||+|||+++..
T Consensus 103 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 103 LVGEVYTGGELFDEIISR-KRFSEVDAARIIRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp EEECCCCSCBHHHHHHTC-SCCBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 999999999999999764 46999999999999999999999999 9999999999999 56789999999999765
Q ss_pred ccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCC--CCCCHH
Q 003978 656 HETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIP--KDVDPR 733 (782)
Q Consensus 656 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p--~~~~~~ 733 (782)
.... ......||+.|+|||++.+ .++.++|||||||++|+|++|.+||...+.......+.........+ ..++++
T Consensus 180 ~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 257 (484)
T 3nyv_A 180 EASK-KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES 257 (484)
T ss_dssp CCCC-SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHH
T ss_pred cccc-ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHH
Confidence 4432 2234479999999999987 58899999999999999999999999998888777775444333333 468999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 734 WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 734 l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
+++||.+||..||.+|||+.++ |.|+||+....
T Consensus 258 ~~~li~~~L~~dp~~R~s~~e~------l~h~~~~~~~~ 290 (484)
T 3nyv_A 258 AKDLIRKMLTYVPSMRISARDA------LDHEWIQTYTK 290 (484)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHH------HTSHHHHHHTC
T ss_pred HHHHHHHHCCCChhHCcCHHHH------hhChhhccccc
Confidence 9999999999999999999999 67899876543
No 169
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=8.2e-42 Score=365.37 Aligned_cols=260 Identities=28% Similarity=0.469 Sum_probs=217.1
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
..++|++++.||+|+||.||+|.+. +..||+|++..... .....+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE--EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH--HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 4578999999999999999999985 67899999865432 2346788899999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 660 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 660 (782)
||||++++|.+++......+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.+||+|||++........
T Consensus 95 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 172 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR--IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ 172 (302)
T ss_dssp EECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH
T ss_pred EEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHHHEEECCCCCEEEEECCCCcccccccc
Confidence 9999999999999876677999999999999999999999998 99999999999999999999999998764433322
Q ss_pred cccCCCCCCcccCcccc-----cCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc-ccCCCCCCCHHH
Q 003978 661 TTKTGKGTPQWMAPEVL-----RNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-RLEIPKDVDPRW 734 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l-----~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~-~~~~p~~~~~~l 734 (782)
......||+.|+|||++ .+..++.++|||||||++|+|++|..||...+.......+..... ....+..++..+
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 252 (302)
T 2j7t_A 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEF 252 (302)
T ss_dssp C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHH
T ss_pred ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHH
Confidence 33355789999999998 467788999999999999999999999998887766655533222 223456789999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 735 AAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 735 ~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
.+||.+||..||.+|||+.++ +.|+||+....
T Consensus 253 ~~li~~~l~~dp~~Rps~~~l------l~h~~~~~~~~ 284 (302)
T 2j7t_A 253 RDFLKIALDKNPETRPSAAQL------LEHPFVSSITS 284 (302)
T ss_dssp HHHHHHHSCSCTTTSCCHHHH------TTSTTTTTCCC
T ss_pred HHHHHHHcccChhhCCCHHHH------hcChHHhhhcc
Confidence 999999999999999999999 56788876543
No 170
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=5.4e-41 Score=360.20 Aligned_cols=259 Identities=22% Similarity=0.366 Sum_probs=219.8
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 580 (782)
..++|++.+.||+|+||.||++.+ .++.||||+++.... .....+.+|+.+++.++||||+++++++.....+|+|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA--FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc--cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 457899999999999999999998 477899999976432 2235678899999999999999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE---cCCCcEEEEecCCCccccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV---DKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl---~~~~~vkL~DFGla~~~~~ 657 (782)
|||+++++|.+++.... .+++..++.++.||+.||.|||+++ |+|+||||+||++ +.++.+||+|||++.....
T Consensus 85 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 85 MQLVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLHENG--IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp ECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTT--CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred EEcCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 99999999999997643 6899999999999999999999998 9999999999999 7788999999999875443
Q ss_pred ccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc--ccCCCCCCCHHHH
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ--RLEIPKDVDPRWA 735 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~--~~~~p~~~~~~l~ 735 (782)
.. .....||+.|+|||++.+..++.++|||||||++|+|++|..||...........+..... ....+..+++++.
T Consensus 162 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 239 (304)
T 2jam_A 162 GI--MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAK 239 (304)
T ss_dssp BT--THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHH
T ss_pred Cc--cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHH
Confidence 22 2233589999999999999999999999999999999999999998887776666543322 2234467899999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcC
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTV 774 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~ 774 (782)
+||.+||..||.+|||+.++ +.|+||+......
T Consensus 240 ~li~~~l~~dp~~Rps~~~~------l~h~~~~~~~~~~ 272 (304)
T 2jam_A 240 DFICHLLEKDPNERYTCEKA------LSHPWIDGNTALH 272 (304)
T ss_dssp HHHHHHHCSSTTTSCCHHHH------HTSHHHHSSCSCC
T ss_pred HHHHHHcCCChhHCcCHHHH------hcCccccCCCccc
Confidence 99999999999999999999 6789998765443
No 171
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.7e-41 Score=366.63 Aligned_cols=261 Identities=30% Similarity=0.573 Sum_probs=219.7
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCe--EEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCc
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSD--VAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQR 576 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~--vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~ 576 (782)
..+++|++.+.||+|+||.||+|.+. +.. +|+|.++... .......+.+|+++++.+ +||||+++++++...+.
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 100 (327)
T 1fvr_A 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY 100 (327)
T ss_dssp CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTE
T ss_pred ccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc-chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCc
Confidence 34579999999999999999999874 443 4889886432 333456788999999999 89999999999999999
Q ss_pred eeEEEeecCCCCHHHHHhhcC---------------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC
Q 003978 577 LCIVTEFLPRGSLFRLLQRNT---------------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH 641 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~---------------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~ 641 (782)
+|+||||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.+
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~~ 178 (327)
T 1fvr_A 101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGEN 178 (327)
T ss_dssp EEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECGG
T ss_pred eEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCccceEEEcCC
Confidence 999999999999999997643 36899999999999999999999999 9999999999999999
Q ss_pred CcEEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhcc
Q 003978 642 WTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFM 720 (782)
Q Consensus 642 ~~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~ 720 (782)
+.+||+|||+++..... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||...........+..
T Consensus 179 ~~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~- 256 (327)
T 1fvr_A 179 YVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ- 256 (327)
T ss_dssp GCEEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGG-
T ss_pred CeEEEcccCcCcccccc-ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhc-
Confidence 99999999998743322 22234467899999999998889999999999999999998 9999998887776665532
Q ss_pred ccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 721 NQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 721 ~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
......+..+++++.+||.+||..||.+|||+.++++.|.++....-
T Consensus 257 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 257 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 23455677899999999999999999999999999999999877543
No 172
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.6e-41 Score=384.22 Aligned_cols=258 Identities=33% Similarity=0.587 Sum_probs=218.9
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEcC-CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYG-SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 576 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~-~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 576 (782)
..+++..++|++.++||+|+||.||+|.+.+ ..||||+++...... +.+.+|+++|+.++||||+++++++.. +.
T Consensus 177 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~ 252 (452)
T 1fmk_A 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLVQLYAVVSE-EP 252 (452)
T ss_dssp TCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCH---HHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred cccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCH---HHHHHHHHHHHhCCCCCEeeEEEEEcC-Cc
Confidence 3567788899999999999999999999865 469999998655433 568899999999999999999999876 67
Q ss_pred eeEEEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
+|+|||||++|+|.+++... ...+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+++..
T Consensus 253 ~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 330 (452)
T 1fmk_A 253 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLI 330 (452)
T ss_dssp CEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCCCTTC--
T ss_pred eEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChhhEEECCCCCEEECCCccceec
Confidence 89999999999999999753 345899999999999999999999999 999999999999999999999999999865
Q ss_pred cccc-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHH
Q 003978 656 HETY-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPR 733 (782)
Q Consensus 656 ~~~~-~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~ 733 (782)
.... .......+++.|+|||++.+..++.++|||||||++|||++ |..||......+....+. ...+...|..+++.
T Consensus 331 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~-~~~~~~~~~~~~~~ 409 (452)
T 1fmk_A 331 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPES 409 (452)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-TTCCCCCCTTSCHH
T ss_pred CCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHH
Confidence 4332 22233457889999999999899999999999999999999 999999988877776664 33456677889999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 734 WAAIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 734 l~~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
+.+||.+||..||++|||+.++++.|+++
T Consensus 410 l~~li~~cl~~dP~~Rpt~~~l~~~L~~~ 438 (452)
T 1fmk_A 410 LHDLMCQCWRKEPEERPTFEYLQAFLEDY 438 (452)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 99999999999999999999998877654
No 173
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=7.8e-41 Score=377.99 Aligned_cols=261 Identities=23% Similarity=0.322 Sum_probs=208.4
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC-----C
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP-----Q 575 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-----~ 575 (782)
..++|++++.||+|+||.||+|.+. ++.||||++..........+.+.+|+.+|+.++||||+++++++... .
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 4579999999999999999999984 56799999987655666678899999999999999999999999766 5
Q ss_pred ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
.+|+||||+. ++|.+++... ..+++..++.++.||+.||.|||++| |+||||||+||||+.++.+||+|||+++..
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~g--ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIHESG--IIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred eEEEEEecCC-cCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 6899999995 5999999764 46999999999999999999999999 999999999999999999999999999865
Q ss_pred ccccc----------------------cccCCCCCCcccCcccc-cCCCCCchhHHHHHHHHHHHHHcCCCC--------
Q 003978 656 HETYL----------------------TTKTGKGTPQWMAPEVL-RNEPSDEKSDVYSFGVILWELATEKIP-------- 704 (782)
Q Consensus 656 ~~~~~----------------------~~~~~~Gt~~y~aPE~l-~~~~~s~~sDIwSLG~ll~elltG~~P-------- 704 (782)
..... .....+||+.|+|||++ .+..++.++|||||||++|||++|..|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~ 259 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNR 259 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGC
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccc
Confidence 43221 12456899999999986 566689999999999999999985444
Q ss_pred ---CCCCCh-----------------HHHHHH------------------------hhccccccC-----CCCCCCHHHH
Q 003978 705 ---WDNLNS-----------------MQVIGA------------------------VGFMNQRLE-----IPKDVDPRWA 735 (782)
Q Consensus 705 ---f~~~~~-----------------~~~~~~------------------------i~~~~~~~~-----~p~~~~~~l~ 735 (782)
|.+.+. ...+.. +........ ..+.+++++.
T Consensus 260 ~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 339 (432)
T 3n9x_A 260 FPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGI 339 (432)
T ss_dssp CCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHH
T ss_pred cccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHH
Confidence 333220 000000 100011111 1146899999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 736 AIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 736 ~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
+||.+||..||.+|||+.++ |.|+||+..+..
T Consensus 340 dLl~~mL~~dP~~R~ta~e~------L~Hp~f~~~~~~ 371 (432)
T 3n9x_A 340 NLLESMLKFNPNKRITIDQA------LDHPYLKDVRKK 371 (432)
T ss_dssp HHHHHHSCSSTTTSCCHHHH------HTCGGGTTTCCT
T ss_pred HHHHHHhcCCcccCCCHHHH------hcChhhhhccCc
Confidence 99999999999999999999 678999876543
No 174
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.5e-42 Score=373.32 Aligned_cols=251 Identities=24% Similarity=0.403 Sum_probs=214.9
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHH------HHHHHHHHHHHHHhCCCCceeEEeeeeecC
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDE------VIHSFRQEVSLMKRLRHPNVLLFMGAVTSP 574 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~------~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~ 574 (782)
..++|++++.||+|+||.||+|.+ .++.||||++........ ....+.+|+.+|+.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 457899999999999999999987 567799999987643221 234567799999999999999999999999
Q ss_pred CceeEEEeecCCC-CHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCc
Q 003978 575 QRLCIVTEFLPRG-SLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 653 (782)
Q Consensus 575 ~~~~lv~E~~~gg-sL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~ 653 (782)
+.+++||||+.+| +|.+++.... .+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++.
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 178 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLRLKD--IIHRDIKDENIVIAEDFTIKLIDFGSAA 178 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC--eEEeccCHHHEEEcCCCcEEEeecccce
Confidence 9999999998766 9999997643 6999999999999999999999999 9999999999999999999999999998
Q ss_pred ccccccccccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCH
Q 003978 654 LKHETYLTTKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDP 732 (782)
Q Consensus 654 ~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~ 732 (782)
....... .....||+.|+|||++.+..+ +.++|||||||++|+|++|..||..... ........+..+++
T Consensus 179 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------~~~~~~~~~~~~~~ 249 (335)
T 3dls_A 179 YLERGKL-FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE--------TVEAAIHPPYLVSK 249 (335)
T ss_dssp ECCTTCC-BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG--------GTTTCCCCSSCCCH
T ss_pred ECCCCCc-eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH--------HHhhccCCCcccCH
Confidence 6554322 234579999999999998877 7899999999999999999999976332 12234455667999
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 733 RWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 733 ~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
++.+||.+||..||.+|||+.++ ++|+||+...
T Consensus 250 ~l~~li~~~L~~dP~~Rps~~el------l~hp~~~~~~ 282 (335)
T 3dls_A 250 ELMSLVSGLLQPVPERRTTLEKL------VTDPWVTQPV 282 (335)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHH------HHCTTTTCCC
T ss_pred HHHHHHHHHccCChhhCcCHHHH------hcCccccCCc
Confidence 99999999999999999999999 6789987643
No 175
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.3e-41 Score=369.71 Aligned_cols=263 Identities=22% Similarity=0.374 Sum_probs=221.6
Q ss_pred ccccccceeEe-eeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCC
Q 003978 500 YEILWEDLTIG-EQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQ 575 (782)
Q Consensus 500 ~e~~~~~y~i~-~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~ 575 (782)
.+...++|.+. ++||+|+||.||+|.+. ++.||||++............+.+|+.+++.+. ||||+++++++....
T Consensus 23 ~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~ 102 (327)
T 3lm5_A 23 MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTS 102 (327)
T ss_dssp HHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred HHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC
Confidence 34556788887 89999999999999985 778999999876554444567889999999995 699999999999999
Q ss_pred ceeEEEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC---CCcEEEEecCC
Q 003978 576 RLCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK---HWTVKVGDFGL 651 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~---~~~vkL~DFGl 651 (782)
.+|+|||||.+++|.+++... ...+++..++.++.||+.||.|||++| |+||||||+||||+. ++.+||+|||+
T Consensus 103 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g--ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~ 180 (327)
T 3lm5_A 103 EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN--IVHLDLKPQNILLSSIYPLGDIKIVDFGM 180 (327)
T ss_dssp EEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEESCBTTBCCEEECCGGG
T ss_pred eEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--eecCcCChHHEEEecCCCCCcEEEeeCcc
Confidence 999999999999999998543 356899999999999999999999999 999999999999987 78999999999
Q ss_pred CcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc--ccCCCCC
Q 003978 652 SRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ--RLEIPKD 729 (782)
Q Consensus 652 a~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~--~~~~p~~ 729 (782)
++....... .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+..... ....+..
T Consensus 181 a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 259 (327)
T 3lm5_A 181 SRKIGHACE-LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSS 259 (327)
T ss_dssp CEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTT
T ss_pred ccccCCccc-cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcc
Confidence 986554322 2345799999999999999999999999999999999999999998888776665543332 3334467
Q ss_pred CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 730 VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 730 ~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
+++.+.+||.+||..||.+|||+.++ |+|+||+...
T Consensus 260 ~~~~~~~li~~~L~~dP~~Rpt~~~l------l~h~~~~~~~ 295 (327)
T 3lm5_A 260 VSQLATDFIQSLLVKNPEKRPTAEIC------LSHSWLQQWD 295 (327)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHH------TTCGGGCCCC
T ss_pred cCHHHHHHHHHHcCCChhhCcCHHHH------hCCHhhcccc
Confidence 89999999999999999999999999 6789997653
No 176
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.8e-41 Score=394.12 Aligned_cols=261 Identities=25% Similarity=0.485 Sum_probs=219.6
Q ss_pred cccccceeEee-eeccCCcEEEEEEEEc----CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 501 EILWEDLTIGE-QIGQGSCGTVYHAVWY----GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 501 e~~~~~y~i~~-~IG~G~~G~Vy~~~~~----~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
.+..+++.+.+ +||+|+||.||+|.+. +..||||+++.... ....+.+.+|+++|+.++|||||++++++.. +
T Consensus 331 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~ 408 (613)
T 2ozo_A 331 FLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E 408 (613)
T ss_dssp BCCTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCS-STTHHHHHHHHHHHTTCCCTTBCCEEEEEES-S
T ss_pred eccccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-C
Confidence 44456677777 8999999999999874 34599999976532 2345678899999999999999999999976 5
Q ss_pred ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
.+|+|||||.+|+|.+++......+++..++.++.||+.||+|||+++ ||||||||+||||+.++.+||+|||+++..
T Consensus 409 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--iiHrDlkp~NILl~~~~~vkL~DFGla~~~ 486 (613)
T 2ozo_A 409 ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN--FVHRNLAARNVLLVNRHYAKISDFGLSKAL 486 (613)
T ss_dssp SEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCCSTTTTC
T ss_pred CeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--EEcCcCCHHHEEEcCCCcEEEeeccCcccc
Confidence 699999999999999999877777999999999999999999999998 999999999999999999999999999865
Q ss_pred cccc---ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCC
Q 003978 656 HETY---LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVD 731 (782)
Q Consensus 656 ~~~~---~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~ 731 (782)
.... .......+++.|+|||++.+..++.++|||||||+||||++ |..||...+..+....+. ...++..|..++
T Consensus 487 ~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~-~~~~~~~p~~~~ 565 (613)
T 2ozo_A 487 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-QGKRMECPPECP 565 (613)
T ss_dssp C--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHH-TTCCCCCCTTCC
T ss_pred cCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-cCCCCCCCCcCC
Confidence 4321 11223356789999999999999999999999999999998 999999988887776664 344667788899
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 732 PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 732 ~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
+++.+||.+||..||.+||++.+|++.|+.+....
T Consensus 566 ~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~ 600 (613)
T 2ozo_A 566 PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 600 (613)
T ss_dssp HHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999887764443
No 177
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=9.3e-41 Score=369.01 Aligned_cols=257 Identities=24% Similarity=0.433 Sum_probs=218.8
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCC--C----HHHHHHHHHHHHHHHhC-CCCceeEEeeeee
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY--S----DEVIHSFRQEVSLMKRL-RHPNVLLFMGAVT 572 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~--~----~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~ 572 (782)
...++|++.+.||+|+||.||+|.+. ++.||||++..... . ....+.+.+|+.+++.+ +||||+++++++.
T Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 170 (365)
T 2y7j_A 91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170 (365)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 34578999999999999999999984 78899999976542 2 23356788999999999 7999999999999
Q ss_pred cCCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCC
Q 003978 573 SPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLS 652 (782)
Q Consensus 573 ~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla 652 (782)
.....|+|||||+|++|.+++... ..+++..++.++.||+.||.|||++| |+|+||||+||||+.++.+||+|||++
T Consensus 171 ~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~g--i~H~Dlkp~NIl~~~~~~ikl~DfG~~ 247 (365)
T 2y7j_A 171 SSSFMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLHANN--IVHRDLKPENILLDDNMQIRLSDFGFS 247 (365)
T ss_dssp BSSEEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred eCCEEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEEEecCcc
Confidence 999999999999999999999764 46899999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccCCCCCCcccCcccccC------CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccC-
Q 003978 653 RLKHETYLTTKTGKGTPQWMAPEVLRN------EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE- 725 (782)
Q Consensus 653 ~~~~~~~~~~~~~~Gt~~y~aPE~l~~------~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~- 725 (782)
....... ......||+.|+|||++.+ ..++.++|||||||++|+|++|..||...........+........
T Consensus 248 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~ 326 (365)
T 2y7j_A 248 CHLEPGE-KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSS 326 (365)
T ss_dssp EECCTTC-CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCH
T ss_pred cccCCCc-ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC
Confidence 7654432 2335679999999999863 3578899999999999999999999998877766655533222221
Q ss_pred -CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003978 726 -IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 768 (782)
Q Consensus 726 -~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~ 768 (782)
....++..+.+||.+||..||.+|||+.++ |+|+||+
T Consensus 327 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~el------l~hp~f~ 364 (365)
T 2y7j_A 327 PEWDDRSSTVKDLISRLLQVDPEARLTAEQA------LQHPFFE 364 (365)
T ss_dssp HHHSSSCHHHHHHHHHHSCSSTTTSCCHHHH------HHSGGGC
T ss_pred cccccCCHHHHHHHHHHcCCChhHCcCHHHH------hcCcccC
Confidence 124688999999999999999999999999 6789986
No 178
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-41 Score=375.80 Aligned_cols=262 Identities=31% Similarity=0.527 Sum_probs=213.6
Q ss_pred cceeEeeeeccCCcEEEEEEEEcC-----CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeee-cCCcee
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWYG-----SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT-SPQRLC 578 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~~-----~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~-~~~~~~ 578 (782)
..|++.++||+|+||.||+|.+.. ..||+|.++... .......+.+|+.+++.++||||+++++++. .++..|
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~ 167 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 167 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS-CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeE
Confidence 468899999999999999998632 248999886533 3455678899999999999999999999864 456789
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
+||||+++++|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++.....
T Consensus 168 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 168 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCC--EecCccchheEEECCCCCEEEeecccccccccc
Confidence 999999999999999877777899999999999999999999999 999999999999999999999999999754332
Q ss_pred cc----cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHH
Q 003978 659 YL----TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPR 733 (782)
Q Consensus 659 ~~----~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~ 733 (782)
.. ......+|+.|+|||++.+..++.++|||||||++|+|++ |.+||...+..+....+. .......|..++..
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~-~~~~~~~p~~~~~~ 324 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDP 324 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHH-TTCCCCCCTTCCHH
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHH
Confidence 11 1223457889999999999999999999999999999999 788998776655554443 23345567789999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 734 WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 734 l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
+.+||.+||..||.+|||+.++++.|+++...+....
T Consensus 325 l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~ 361 (373)
T 3c1x_A 325 LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH 361 (373)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCC
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999999999988776443
No 179
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=6.5e-42 Score=370.44 Aligned_cols=262 Identities=28% Similarity=0.453 Sum_probs=214.3
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEc-CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWY-GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~-~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
+.+...++|++.+.||+|+||.||+|.+. ++.||||++..... ...+.+.+|+.+++.++||||+++++++...+.+
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS--QGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM 110 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCS--SHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCC
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeE
Confidence 34456689999999999999999999974 77899998865433 3356788999999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcC---CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 578 CIVTEFLPRGSLFRLLQRNT---TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~---~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
|+||||+++++|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++.
T Consensus 111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 188 (321)
T 2qkw_B 111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA--IIHRDVKSINILLDENFVPKITDFGISKK 188 (321)
T ss_dssp EEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCSTTEEECTTCCEEECCCTTCEE
T ss_pred EEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC--eecCCCCHHHEEECCCCCEEEeecccccc
Confidence 99999999999999986543 35899999999999999999999998 99999999999999999999999999975
Q ss_pred ccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHH---HHH----hhc--ccc-
Q 003978 655 KHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQV---IGA----VGF--MNQ- 722 (782)
Q Consensus 655 ~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~---~~~----i~~--~~~- 722 (782)
..... .......||+.|+|||++.+..++.++|||||||++|+|++|..||........ ... ... ...
T Consensus 189 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (321)
T 2qkw_B 189 GTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268 (321)
T ss_dssp CSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSS
T ss_pred cccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHh
Confidence 43321 122334589999999999988999999999999999999999999975433211 000 000 000
Q ss_pred -cc----CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 723 -RL----EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 723 -~~----~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
.. .++..++..+.+||.+||..||++|||+.+++++|+.+.+
T Consensus 269 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp SSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 11 1223345678999999999999999999999999998764
No 180
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=6e-41 Score=363.86 Aligned_cols=262 Identities=26% Similarity=0.456 Sum_probs=220.2
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE-------cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW-------YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS 573 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~-------~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~ 573 (782)
++..++|++++.||+|+||.||+|.+ .+..||||++.... .......+.+|+.+++.++||||+++++++..
T Consensus 26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 104 (327)
T 2yfx_A 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSLQ 104 (327)
T ss_dssp BCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc-chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC
Confidence 35567999999999999999999984 35579999986433 44556678899999999999999999999999
Q ss_pred CCceeEEEeecCCCCHHHHHhhcC------CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC---CCcE
Q 003978 574 PQRLCIVTEFLPRGSLFRLLQRNT------TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK---HWTV 644 (782)
Q Consensus 574 ~~~~~lv~E~~~ggsL~~~l~~~~------~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~---~~~v 644 (782)
....|+|||||++++|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||+||||+. +..+
T Consensus 105 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~--i~H~dlkp~NIli~~~~~~~~~ 182 (327)
T 2yfx_A 105 SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVA 182 (327)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESCSSTTCCE
T ss_pred CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC--eecCcCCHhHEEEecCCCcceE
Confidence 999999999999999999997653 34889999999999999999999999 999999999999984 4469
Q ss_pred EEEecCCCccccccc--ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccc
Q 003978 645 KVGDFGLSRLKHETY--LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMN 721 (782)
Q Consensus 645 kL~DFGla~~~~~~~--~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~ 721 (782)
||+|||++....... .......||+.|+|||++.+..++.++|||||||++|+|++ |..||...........+. ..
T Consensus 183 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~-~~ 261 (327)
T 2yfx_A 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT-SG 261 (327)
T ss_dssp EECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH-TT
T ss_pred EECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHh-cC
Confidence 999999987543221 12223467899999999999899999999999999999998 999999888776665553 23
Q ss_pred cccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 722 QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 722 ~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
.....+..++..+.+||.+||..||.+||++.+++++|..+....
T Consensus 262 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 262 GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 355667789999999999999999999999999999999887644
No 181
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=7.5e-41 Score=358.45 Aligned_cols=261 Identities=24% Similarity=0.440 Sum_probs=216.6
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCC--HHHHHHHHHHHHHHHhCCCCceeEEeeee--ecCCc
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYS--DEVIHSFRQEVSLMKRLRHPNVLLFMGAV--TSPQR 576 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~--~~~~~ 576 (782)
..++|++++.||+|+||.||++.+ .+..||||++...... ......+.+|+.+++.++||||+++++++ .....
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 357899999999999999999998 4668999999764321 23456788999999999999999999998 44567
Q ss_pred eeEEEeecCCCCHHHHHhh-cCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 577 LCIVTEFLPRGSLFRLLQR-NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~-~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
+|+|||||.++ |.+++.. ....+++..++.++.||+.||.|||+++ |+|+||||+|||++.++.+||+|||++...
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~--i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG--IVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCcccEEEcCCCcEEeecccccccc
Confidence 89999999765 7777754 3456899999999999999999999999 999999999999999999999999999765
Q ss_pred ccc--cccccCCCCCCcccCcccccCCCC--CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCC
Q 003978 656 HET--YLTTKTGKGTPQWMAPEVLRNEPS--DEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVD 731 (782)
Q Consensus 656 ~~~--~~~~~~~~Gt~~y~aPE~l~~~~~--s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~ 731 (782)
... ........||+.|+|||++.+... +.++|||||||++|+|++|..||...+.......+. .....++..++
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~--~~~~~~~~~~~ 237 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIG--KGSYAIPGDCG 237 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH--HCCCCCCSSSC
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHh--cCCCCCCCccC
Confidence 422 222335579999999999987544 779999999999999999999999888777666553 23456778899
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcC
Q 003978 732 PRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTV 774 (782)
Q Consensus 732 ~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~ 774 (782)
+.+.+||.+||..||.+|||+.++ ++|+||+......
T Consensus 238 ~~l~~li~~~l~~dp~~Rps~~~l------l~~~~~~~~~~~~ 274 (305)
T 2wtk_C 238 PPLSDLLKGMLEYEPAKRFSIRQI------RQHSWFRKKHPPA 274 (305)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHH------HHSHHHHSCCCC-
T ss_pred HHHHHHHHHHccCChhhCCCHHHH------hcCcccccCCCCc
Confidence 999999999999999999999999 6789998765543
No 182
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.4e-40 Score=368.25 Aligned_cols=254 Identities=26% Similarity=0.342 Sum_probs=205.1
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC-----
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ----- 575 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----- 575 (782)
..++|++++.||+|+||.||+|.+ .++.||||++............+.+|+.+++.++||||+++++++....
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 457999999999999999999987 4678999999876666667788899999999999999999999987655
Q ss_pred -ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 576 -RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 576 -~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
.+|+|||||+ ++|.+++.. .+++..+..++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++.
T Consensus 103 ~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 103 QDVYIVMELMD-ANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp CEEEEEEECCS-EEHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred cceEEEEEcCC-CCHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHHCC--eecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 6799999996 488888853 4889999999999999999999999 99999999999999999999999999976
Q ss_pred cccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc-----------
Q 003978 655 KHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR----------- 723 (782)
Q Consensus 655 ~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~----------- 723 (782)
..... ......||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+......
T Consensus 177 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 255 (371)
T 2xrw_A 177 AGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 255 (371)
T ss_dssp --------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCH
T ss_pred ccccc-ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 54432 223457899999999999999999999999999999999999999988776655444221110
Q ss_pred ---------cC--------------CCC------CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 724 ---------LE--------------IPK------DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 724 ---------~~--------------~p~------~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
+. ++. ..+.++++||.+||..||.+|||+.++ |+|+||+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~------l~hp~~~~ 324 (371)
T 2xrw_A 256 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA------LQHPYINV 324 (371)
T ss_dssp HHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHH------HHSHHHHT
T ss_pred HHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHH------hCCcchhh
Confidence 00 000 015689999999999999999999999 67899964
No 183
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.6e-41 Score=371.78 Aligned_cols=257 Identities=21% Similarity=0.249 Sum_probs=202.8
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEEc-----CCeEEEEEEeccCCCH----H-----HHHHHHHHHHHHHhCCCCcee
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVWY-----GSDVAVKVFSRQEYSD----E-----VIHSFRQEVSLMKRLRHPNVL 565 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~~-----~~~vAiK~~~~~~~~~----~-----~~~~~~~Ei~il~~l~HpnIv 565 (782)
.+...++|++++.||+|+||.||+|.+. +..||||++....... . ....+.+|+.+++.++||||+
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~ 111 (345)
T 2v62_A 32 DDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIP 111 (345)
T ss_dssp ECTTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCC
T ss_pred ccccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcc
Confidence 3455679999999999999999999984 4679999987653211 0 112356788999999999999
Q ss_pred EEeeeeec----CCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC
Q 003978 566 LFMGAVTS----PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH 641 (782)
Q Consensus 566 ~l~~~~~~----~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~ 641 (782)
++++++.. ...+|+||||| +++|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+||||+.+
T Consensus 112 ~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~ 187 (345)
T 2v62_A 112 LFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHENE--YVHGDIKAANLLLGYK 187 (345)
T ss_dssp CEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEESS
T ss_pred eeecccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCcCHHHEEEccC
Confidence 99999877 67899999999 999999997655 7999999999999999999999998 9999999999999887
Q ss_pred C--cEEEEecCCCcccccccc-------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCC--Ch
Q 003978 642 W--TVKVGDFGLSRLKHETYL-------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNL--NS 710 (782)
Q Consensus 642 ~--~vkL~DFGla~~~~~~~~-------~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~--~~ 710 (782)
+ .+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|+|++|..||... +.
T Consensus 188 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~ 267 (345)
T 2v62_A 188 NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP 267 (345)
T ss_dssp STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH
T ss_pred CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc
Confidence 7 999999999976533211 113457999999999999999999999999999999999999999642 22
Q ss_pred HHHHHHhhccccccCCC---------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 711 MQVIGAVGFMNQRLEIP---------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 711 ~~~~~~i~~~~~~~~~p---------~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
....... ......++ ..++.++.+||.+||..||.+||++.+|++.|+++
T Consensus 268 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 326 (345)
T 2v62_A 268 VAVQTAK--TNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH 326 (345)
T ss_dssp HHHHHHH--HHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred HHHHHHH--HhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence 2221111 11111122 27899999999999999999999999999887754
No 184
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.1e-41 Score=365.80 Aligned_cols=260 Identities=30% Similarity=0.462 Sum_probs=202.9
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHH--HHhCCCCceeEEeeeee-----c
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSL--MKRLRHPNVLLFMGAVT-----S 573 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~i--l~~l~HpnIv~l~~~~~-----~ 573 (782)
.+..++|+++++||+|+||.||+|.+.++.||||++..... ..+..|.++ +..++||||+++++.+. .
T Consensus 9 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~-----~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 83 (336)
T 3g2f_A 9 SLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANR-----QNFINEKNIYRVPLMEHDNIARFIVGDERVTADG 83 (336)
T ss_dssp CCCTTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGGH-----HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTS
T ss_pred CcChHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccch-----hhHHHHHHHHHHHhccCcchhhheecccccccCC
Confidence 34567999999999999999999999999999999975431 233334444 45589999999997543 2
Q ss_pred CCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcC---------CCCeeecCCCCCcEEEcCCCcE
Q 003978 574 PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC---------NPPIIHRDLKSSNLLVDKHWTV 644 (782)
Q Consensus 574 ~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~---------~~~ivHrDIKp~NILl~~~~~v 644 (782)
...+|+|||||++++|.+++.... +++..++.++.||+.||.|||++ + |+||||||+||||+.++.+
T Consensus 84 ~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~--ivH~Dikp~Nill~~~~~~ 159 (336)
T 3g2f_A 84 RMEYLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA--ISHRDLNSRNVLVKNDGTC 159 (336)
T ss_dssp CEEEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC--EECSSCSGGGEEECTTSCE
T ss_pred CceEEEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHHhhhccccccccc--eeecccccceEEEcCCCcE
Confidence 335789999999999999997644 58888999999999999999998 8 9999999999999999999
Q ss_pred EEEecCCCcccccc--------cccccCCCCCCcccCcccccC-------CCCCchhHHHHHHHHHHHHHcCCCCCCCCC
Q 003978 645 KVGDFGLSRLKHET--------YLTTKTGKGTPQWMAPEVLRN-------EPSDEKSDVYSFGVILWELATEKIPWDNLN 709 (782)
Q Consensus 645 kL~DFGla~~~~~~--------~~~~~~~~Gt~~y~aPE~l~~-------~~~s~~sDIwSLG~ll~elltG~~Pf~~~~ 709 (782)
||+|||+++..... ........||+.|+|||++.+ ..++.++|||||||++|+|++|..||....
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~ 239 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTS
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCcc
Confidence 99999999765432 112224479999999999987 345678999999999999999977663221
Q ss_pred h------------------HHHHHHhhccccccCCCCC------CCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003978 710 S------------------MQVIGAVGFMNQRLEIPKD------VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 765 (782)
Q Consensus 710 ~------------------~~~~~~i~~~~~~~~~p~~------~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~ 765 (782)
. ......+......+.++.. +++++.+||.+||..||.+|||+.++++.|++|.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 240 SVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp CCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred chhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence 1 1111112222233444443 345899999999999999999999999999999998
Q ss_pred Hhhc
Q 003978 766 YFQA 769 (782)
Q Consensus 766 ~~~~ 769 (782)
|-+.
T Consensus 320 ~~~~ 323 (336)
T 3g2f_A 320 WERN 323 (336)
T ss_dssp CCC-
T ss_pred HHhc
Confidence 8643
No 185
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-41 Score=375.14 Aligned_cols=258 Identities=22% Similarity=0.369 Sum_probs=212.5
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE-----cCCeEEEEEEeccCC--CHHHHHHHHHHHHHHHhC-CCCceeEEeeeeec
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW-----YGSDVAVKVFSRQEY--SDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTS 573 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~-----~~~~vAiK~~~~~~~--~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~ 573 (782)
...++|+++++||+|+||.||++.. .++.||||+++.... .......+.+|+++|+.+ .||||+++++++..
T Consensus 51 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 130 (355)
T 1vzo_A 51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT 130 (355)
T ss_dssp CCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE
T ss_pred ccccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee
Confidence 4457999999999999999999998 577899999865321 111224566799999999 69999999999999
Q ss_pred CCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCc
Q 003978 574 PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 653 (782)
Q Consensus 574 ~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~ 653 (782)
...+|+|||||++++|.+++.... .+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++
T Consensus 131 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 131 ETKLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKLG--IIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp TTEEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred CceEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 999999999999999999997643 6899999999999999999999998 9999999999999999999999999997
Q ss_pred ccccc-cccccCCCCCCcccCcccccC--CCCCchhHHHHHHHHHHHHHcCCCCCCCCCh----HHHHHHhhccccccCC
Q 003978 654 LKHET-YLTTKTGKGTPQWMAPEVLRN--EPSDEKSDVYSFGVILWELATEKIPWDNLNS----MQVIGAVGFMNQRLEI 726 (782)
Q Consensus 654 ~~~~~-~~~~~~~~Gt~~y~aPE~l~~--~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~----~~~~~~i~~~~~~~~~ 726 (782)
..... .......+||+.|+|||++.+ ..++.++|||||||++|+|++|..||..... ......+ ......+
T Consensus 208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~ 285 (355)
T 1vzo_A 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI--LKSEPPY 285 (355)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHH--HHCCCCC
T ss_pred ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHH--hccCCCC
Confidence 54332 222334579999999999986 3468899999999999999999999974432 2222222 2345567
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCCC-----CHHHHHHHHHHHHHHHhhcc
Q 003978 727 PKDVDPRWAAIVESCWHSDPQCRP-----SFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 727 p~~~~~~l~~LI~~cL~~dP~~RP-----s~~ell~~L~~L~~~~~~~~ 770 (782)
+..++..+.+||.+||..||.+|| ++.++ +.|+||+..
T Consensus 286 ~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~el------l~h~~f~~~ 328 (355)
T 1vzo_A 286 PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEI------KEHLFFQKI 328 (355)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHH------HTSGGGTTC
T ss_pred CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHH------HcCcchhcC
Confidence 788999999999999999999999 99999 567888643
No 186
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=7.5e-41 Score=362.81 Aligned_cols=250 Identities=21% Similarity=0.354 Sum_probs=206.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEeeeeec--CCcee
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTS--PQRLC 578 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~--~~~~~ 578 (782)
.++|+++++||+|+||.||+|.+ .++.||||+++... .+.+.+|+.+++.+. ||||+++++++.. ....+
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 109 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 109 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc-----hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence 47899999999999999999987 57789999987433 356889999999997 9999999999987 56789
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC-cEEEEecCCCccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW-TVKVGDFGLSRLKHE 657 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~-~vkL~DFGla~~~~~ 657 (782)
+||||+.+++|.+++. .+++..++.++.||+.||.|||+++ |+||||||+||||+.++ .+||+|||+++....
T Consensus 110 lv~e~~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp EEEECCCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred EEEeccCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 9999999999999885 3788999999999999999999999 99999999999999776 899999999976544
Q ss_pred ccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCC-hHHHHHHhhcccc-------------
Q 003978 658 TYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLN-SMQVIGAVGFMNQ------------- 722 (782)
Q Consensus 658 ~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~-~~~~~~~i~~~~~------------- 722 (782)
.. ......||+.|+|||++.+ ..++.++|||||||++|+|++|..||.... ....+..+.....
T Consensus 184 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 262 (330)
T 3nsz_A 184 GQ-EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI 262 (330)
T ss_dssp TC-CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred CC-ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcc
Confidence 32 2335578999999999987 668999999999999999999999995432 2222211110000
Q ss_pred ----------------------ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 723 ----------------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 723 ----------------------~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
....+..+++++.+||.+||..||.+|||+.++ |+|+||+...
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~------l~hp~f~~~~ 327 (330)
T 3nsz_A 263 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA------MEHPYFYTVV 327 (330)
T ss_dssp CCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHH------HTSGGGTTCC
T ss_pred ccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHH------hcCccHhhhc
Confidence 001122378999999999999999999999999 6789998764
No 187
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=4.3e-42 Score=370.49 Aligned_cols=266 Identities=31% Similarity=0.557 Sum_probs=220.4
Q ss_pred cccccccccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc
Q 003978 497 CLDYEILWEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR 576 (782)
Q Consensus 497 ~~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 576 (782)
...+++..++|++.+.||+|+||.||+|.+.+ .+|+|+++.........+.+.+|+.+++.++||||+++++++.....
T Consensus 25 ~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~-~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 103 (319)
T 2y4i_B 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPH 103 (319)
T ss_dssp GGGSSSCCSCEECCCBCCCSSSSEEEEEEESS-SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSC
T ss_pred cccccCCHHHeEEeeEeccCCceEEEEEEEcC-eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCc
Confidence 35667778999999999999999999999866 59999987654433334567789999999999999999999999999
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
+++||||+++++|.+++......+++..++.++.||+.||.|||+++ |+|+||||+|||++ ++.+||+|||++....
T Consensus 104 ~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~ 180 (319)
T 2y4i_B 104 LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG--ILHKDLKSKNVFYD-NGKVVITDFGLFSISG 180 (319)
T ss_dssp EEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSTTEEEC---CCEECCCSCCC---
T ss_pred eEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCChhhEEEe-CCCEEEeecCCccccc
Confidence 99999999999999999876667999999999999999999999999 99999999999998 6799999999987543
Q ss_pred cc-----cccccCCCCCCcccCcccccC---------CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc
Q 003978 657 ET-----YLTTKTGKGTPQWMAPEVLRN---------EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ 722 (782)
Q Consensus 657 ~~-----~~~~~~~~Gt~~y~aPE~l~~---------~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~ 722 (782)
.. ........||+.|+|||++.+ ..++.++|||||||++|+|++|..||...........+.....
T Consensus 181 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~ 260 (319)
T 2y4i_B 181 VLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMK 260 (319)
T ss_dssp -------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCC
T ss_pred cccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCC
Confidence 21 112233468999999999875 4468899999999999999999999998887777666644333
Q ss_pred ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 723 RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 723 ~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
....+..++.++.+||.+||..||.+|||+.++++.|+++....
T Consensus 261 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 261 PNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp CCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred CCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 33334468899999999999999999999999999999887654
No 188
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.9e-41 Score=359.97 Aligned_cols=257 Identities=19% Similarity=0.260 Sum_probs=209.3
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~l 579 (782)
..++|++.+.||+|+||.||++.+ .++.||||++..... .......+.+|+.+++.++||||+++++++..++.+|+
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 357899999999999999999997 467799999976543 34556789999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY 659 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~ 659 (782)
||||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+|+||||+||||+.++.+||+|||++.......
T Consensus 112 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQ-GPLAPPRAVAIVRQIGSALDAAHAAG--ATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EEECCCCEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EEEecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCc--CCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 99999999999999764 36899999999999999999999999 9999999999999999999999999987654432
Q ss_pred -ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc-cccCCCCCCCHHHHHH
Q 003978 660 -LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN-QRLEIPKDVDPRWAAI 737 (782)
Q Consensus 660 -~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~-~~~~~p~~~~~~l~~L 737 (782)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||...........+.... .....+..+++++.+|
T Consensus 189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 268 (309)
T 2h34_A 189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAV 268 (309)
T ss_dssp --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHHH
T ss_pred cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHHH
Confidence 22234578999999999999999999999999999999999999998876654433332222 2234567899999999
Q ss_pred HHHhhhhCCCCCC-CHHHHHHHHHHH
Q 003978 738 VESCWHSDPQCRP-SFQELVDKLRDL 762 (782)
Q Consensus 738 I~~cL~~dP~~RP-s~~ell~~L~~L 762 (782)
|.+||..||++|| ++.++++.|+++
T Consensus 269 i~~~l~~dP~~Rp~s~~~l~~~l~~~ 294 (309)
T 2h34_A 269 IARGMAKNPEDRYVTCGDLSAAAHAA 294 (309)
T ss_dssp HHHHTCSSGGGSCSSHHHHHHHHHHT
T ss_pred HHHhccCCHHHHHHhHHHHHHHHHHH
Confidence 9999999999999 999998887755
No 189
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=359.07 Aligned_cols=262 Identities=25% Similarity=0.425 Sum_probs=200.7
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
..|....++|++++.||+|+||.||+|.+. ++.||||++............+..+..+++.++||||+++++++..+.
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~ 97 (318)
T 2dyl_A 18 QRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNT 97 (318)
T ss_dssp SEEECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred hhhhhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC
Confidence 456677889999999999999999999984 788999999876554444555666667788889999999999999999
Q ss_pred ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcC-CCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC-NPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~-~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
.+|+||||+ ++.+..++......+++..++.++.||+.||.|||+. + |+|+||||+|||++.++.+||+|||++..
T Consensus 98 ~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~--i~H~dlkp~Nil~~~~~~~kl~dfg~~~~ 174 (318)
T 2dyl_A 98 DVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGR 174 (318)
T ss_dssp EEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCGGGEEECTTSCEEECCCTTC--
T ss_pred cEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCC--EEeCCCCHHHEEECCCCCEEEEECCCchh
Confidence 999999999 6677777766566799999999999999999999985 8 99999999999999999999999999976
Q ss_pred cccccccccCCCCCCcccCccccc-----CCCCCchhHHHHHHHHHHHHHcCCCCCCCCC-hHHHHHHhhccccccCCC-
Q 003978 655 KHETYLTTKTGKGTPQWMAPEVLR-----NEPSDEKSDVYSFGVILWELATEKIPWDNLN-SMQVIGAVGFMNQRLEIP- 727 (782)
Q Consensus 655 ~~~~~~~~~~~~Gt~~y~aPE~l~-----~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~-~~~~~~~i~~~~~~~~~p- 727 (782)
..... ......||+.|+|||++. +..++.++|||||||++|+|++|..||.... .......+.. .....++
T Consensus 175 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~ 252 (318)
T 2dyl_A 175 LVDDK-AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ-EEPPLLPG 252 (318)
T ss_dssp -------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHH-SCCCCCCS
T ss_pred ccCCc-cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhc-cCCCCCCc
Confidence 54432 223457899999999994 5567889999999999999999999998743 3333333322 2222222
Q ss_pred -CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 728 -KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 728 -~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
..+++++.+||.+||..||.+||++.+++ .|+||+..
T Consensus 253 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll------~h~~~~~~ 290 (318)
T 2dyl_A 253 HMGFSGDFQSFVKDCLTKDHRKRPKYNKLL------EHSFIKRY 290 (318)
T ss_dssp SSCCCHHHHHHHHHHTCSCTTTSCCHHHHT------TSHHHHHH
T ss_pred cCCCCHHHHHHHHHHccCChhHCcCHHHHh------hCHHHHhc
Confidence 46899999999999999999999999994 56676543
No 190
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=4.7e-41 Score=354.47 Aligned_cols=259 Identities=25% Similarity=0.386 Sum_probs=216.4
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
.++|++++.||+|+||.||+|.+. ++.||||++...... .....+.+|+.+++.++||||+++++++...+..|+||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT-THHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch-hhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 468999999999999999999984 778999999765432 34567889999999999999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc--
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY-- 659 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~-- 659 (782)
||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+|+||||+||+++.++.+||+|||++.......
T Consensus 85 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 85 EYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp ECCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred EecCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 999999999998653 46899999999999999999999999 9999999999999999999999999997543321
Q ss_pred ccccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhhccccccCCCCCCCHHHHHH
Q 003978 660 LTTKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAVGFMNQRLEIPKDVDPRWAAI 737 (782)
Q Consensus 660 ~~~~~~~Gt~~y~aPE~l~~~~~-s~~sDIwSLG~ll~elltG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~~l~~L 737 (782)
.......||+.|+|||++.+..+ +.++|||||||++|+|++|..||...... ..................+++.+.+|
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 241 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHH
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHH
Confidence 22335578999999999988765 67899999999999999999999876543 22222221222222335689999999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 738 VESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 738 I~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
|.+||..||.+|||+.++ +.|+||+....
T Consensus 242 i~~~l~~~p~~Rps~~~i------l~~~~~~~~~~ 270 (276)
T 2yex_A 242 LHKILVENPSARITIPDI------KKDRWYNKPLK 270 (276)
T ss_dssp HHHHSCSSTTTSCCHHHH------TTCTTTTCCCC
T ss_pred HHHHCCCCchhCCCHHHH------hcCccccChhh
Confidence 999999999999999999 56899986643
No 191
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.8e-40 Score=374.79 Aligned_cols=257 Identities=23% Similarity=0.304 Sum_probs=212.9
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC------CCCceeEEeeeee
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL------RHPNVLLFMGAVT 572 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l------~HpnIv~l~~~~~ 572 (782)
+....+|+++++||+|+||.||+|.+. ++.||||+++.. ......+.+|+++++.+ .|+||+++++++.
T Consensus 93 ~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~ 169 (429)
T 3kvw_A 93 DHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFT 169 (429)
T ss_dssp CEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEE
T ss_pred CcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecc
Confidence 455678999999999999999999884 577999999653 34446677888888877 5779999999999
Q ss_pred cCCceeEEEeecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc--EEEEec
Q 003978 573 SPQRLCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT--VKVGDF 649 (782)
Q Consensus 573 ~~~~~~lv~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~--vkL~DF 649 (782)
....+|+||||+. ++|.+++.... ..+++..++.++.||+.||.|||+++ ||||||||+||||+.++. +||+||
T Consensus 170 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlKp~NILl~~~~~~~vkL~DF 246 (429)
T 3kvw_A 170 FRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDF 246 (429)
T ss_dssp ETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT--EECSCCSGGGEEESSTTSCCEEECCC
T ss_pred cCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEEccCCCcceEEeec
Confidence 9999999999995 69999997654 35899999999999999999999999 999999999999999887 999999
Q ss_pred CCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc-----
Q 003978 650 GLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL----- 724 (782)
Q Consensus 650 Gla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~----- 724 (782)
|+++..... ....+||+.|+|||++.+..++.++|||||||+||+|++|..||...+....+..+......+
T Consensus 247 G~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~ 323 (429)
T 3kvw_A 247 GSSCYEHQR---VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLL 323 (429)
T ss_dssp TTCEETTCC---CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred ccceecCCc---ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHH
Confidence 999765433 235578999999999999999999999999999999999999999887766554432110000
Q ss_pred ----------------------------------------------------CCCCCCCHHHHHHHHHhhhhCCCCCCCH
Q 003978 725 ----------------------------------------------------EIPKDVDPRWAAIVESCWHSDPQCRPSF 752 (782)
Q Consensus 725 ----------------------------------------------------~~p~~~~~~l~~LI~~cL~~dP~~RPs~ 752 (782)
.++...++++.+||.+||..||.+|||+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta 403 (429)
T 3kvw_A 324 DASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTP 403 (429)
T ss_dssp HTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred HhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCH
Confidence 0122347889999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccC
Q 003978 753 QELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 753 ~ell~~L~~L~~~~~~~~~~ 772 (782)
.++ |+|+||+....
T Consensus 404 ~e~------L~Hpw~~~~~~ 417 (429)
T 3kvw_A 404 GQA------LRHPWLRRRLP 417 (429)
T ss_dssp HHH------HTSTTTC----
T ss_pred HHH------hCChhhccCCC
Confidence 999 67899987543
No 192
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=360.61 Aligned_cols=261 Identities=26% Similarity=0.431 Sum_probs=197.9
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEeeeee---
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVT--- 572 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~--- 572 (782)
..+....+|++.++||+|+||.||++.+ .++.||||++... .......+.+|+.+++.+. ||||+++++++.
T Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~ 99 (337)
T 3ll6_A 22 TVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGK 99 (337)
T ss_dssp EEEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECT
T ss_pred eeeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC--chHHHHHHHHHHHHHHHhccCCChhhccccccccc
Confidence 3455567999999999999999999998 6778999998654 3455677889999999996 999999999983
Q ss_pred -----cCCceeEEEeecCCCCHHHHHhh--cCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEE
Q 003978 573 -----SPQRLCIVTEFLPRGSLFRLLQR--NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVK 645 (782)
Q Consensus 573 -----~~~~~~lv~E~~~ggsL~~~l~~--~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vk 645 (782)
....++++|||+. |+|.+++.. ....+++..++.++.||+.||.|||+++.+|+||||||+||||+.++.+|
T Consensus 100 ~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~k 178 (337)
T 3ll6_A 100 EESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIK 178 (337)
T ss_dssp TTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEE
T ss_pred cccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEE
Confidence 3445899999995 699998864 34569999999999999999999999776699999999999999999999
Q ss_pred EEecCCCcccccccc------------cccCCCCCCcccCcccc---cCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh
Q 003978 646 VGDFGLSRLKHETYL------------TTKTGKGTPQWMAPEVL---RNEPSDEKSDVYSFGVILWELATEKIPWDNLNS 710 (782)
Q Consensus 646 L~DFGla~~~~~~~~------------~~~~~~Gt~~y~aPE~l---~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~ 710 (782)
|+|||+++....... ......||+.|+|||++ .+..++.++|||||||++|+|++|..||.....
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~ 258 (337)
T 3ll6_A 179 LCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK 258 (337)
T ss_dssp BCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred EecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH
Confidence 999999976543221 11134689999999998 567788999999999999999999999976554
Q ss_pred HHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 711 MQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 711 ~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
...... ......+..++..+.+||.+||..||.+|||+.+++++|.++....
T Consensus 259 ~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 259 LRIVNG----KYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp -----------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHhhcC----cccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 332221 2233445667888999999999999999999999999999887643
No 193
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.9e-41 Score=372.66 Aligned_cols=255 Identities=22% Similarity=0.334 Sum_probs=208.3
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec------
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS------ 573 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~------ 573 (782)
...++|++++.||+|+||.||+|.+ .++.||||++..... ...+|+++|+.++|||||++++++..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc------hHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 4457899999999999999999987 577899999875532 12369999999999999999999843
Q ss_pred --------------------------------CCceeEEEeecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHh
Q 003978 574 --------------------------------PQRLCIVTEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSY 618 (782)
Q Consensus 574 --------------------------------~~~~~lv~E~~~ggsL~~~l~~---~~~~l~~~~~~~i~~qll~aL~~ 618 (782)
...+++|||||+ ++|.+.+.. ....+++..++.++.||+.||.|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp --------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 334889999997 588777753 34579999999999999999999
Q ss_pred hhcCCCCeeecCCCCCcEEEc-CCCcEEEEecCCCcccccccccccCCCCCCcccCcccccCCC-CCchhHHHHHHHHHH
Q 003978 619 LHHCNPPIIHRDLKSSNLLVD-KHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILW 696 (782)
Q Consensus 619 LH~~~~~ivHrDIKp~NILl~-~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~s~~sDIwSLG~ll~ 696 (782)
||++| |+||||||+||||+ .++.+||+|||+++...... ......||+.|+|||++.+.. ++.++|||||||++|
T Consensus 157 LH~~g--i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ 233 (383)
T 3eb0_A 157 IHSLG--ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE-PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFG 233 (383)
T ss_dssp HHTTT--EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred HHHCc--CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHH
Confidence 99998 99999999999997 68899999999998654432 233557899999999988754 899999999999999
Q ss_pred HHHcCCCCCCCCChHHHHHHhhcccc---------------------------ccCCCCCCCHHHHHHHHHhhhhCCCCC
Q 003978 697 ELATEKIPWDNLNSMQVIGAVGFMNQ---------------------------RLEIPKDVDPRWAAIVESCWHSDPQCR 749 (782)
Q Consensus 697 elltG~~Pf~~~~~~~~~~~i~~~~~---------------------------~~~~p~~~~~~l~~LI~~cL~~dP~~R 749 (782)
+|++|..||...+....+..+..... ...++..+++++.+||.+||..||.+|
T Consensus 234 ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (383)
T 3eb0_A 234 ELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLR 313 (383)
T ss_dssp HHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGS
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhC
Confidence 99999999998887765555432111 111456689999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhhcccC
Q 003978 750 PSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 750 Ps~~ell~~L~~L~~~~~~~~~~ 772 (782)
||+.++ |+|+||+..+.
T Consensus 314 ~t~~e~------l~hp~f~~~~~ 330 (383)
T 3eb0_A 314 INPYEA------MAHPFFDHLRN 330 (383)
T ss_dssp CCHHHH------HTSGGGHHHHH
T ss_pred CCHHHH------hcCHHHHHHHh
Confidence 999999 56788876543
No 194
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-40 Score=361.10 Aligned_cols=256 Identities=30% Similarity=0.530 Sum_probs=205.8
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC--CCCceeEEeeeeecC----
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL--RHPNVLLFMGAVTSP---- 574 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l--~HpnIv~l~~~~~~~---- 574 (782)
....++|+++++||+|+||.||+|.+.++.||||++.... ...+.+|.+++..+ +||||+++++++...
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTE-----EASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred cccccceEEEeEeecCCCeEEEEEEECCceEEEEEEeccc-----cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 4556799999999999999999999999999999986543 13344556665554 899999999998876
Q ss_pred CceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcC--------CCCeeecCCCCCcEEEcCCCcEEE
Q 003978 575 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC--------NPPIIHRDLKSSNLLVDKHWTVKV 646 (782)
Q Consensus 575 ~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~--------~~~ivHrDIKp~NILl~~~~~vkL 646 (782)
..+|+|||||++++|.+++... .+++..++.++.|++.||.|||++ + |+||||||+||||+.++.+||
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dikp~Nill~~~~~~kl 183 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA--IAHRDLKSKNILVKKNGTCCI 183 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC--EECSCCCGGGEEECTTSCEEE
T ss_pred CceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC--EEecccchHHEEECCCCCEEE
Confidence 6789999999999999999754 589999999999999999999988 7 999999999999999999999
Q ss_pred EecCCCccccccccc----ccCCCCCCcccCcccccCCCCCch------hHHHHHHHHHHHHHcC----------CCCCC
Q 003978 647 GDFGLSRLKHETYLT----TKTGKGTPQWMAPEVLRNEPSDEK------SDVYSFGVILWELATE----------KIPWD 706 (782)
Q Consensus 647 ~DFGla~~~~~~~~~----~~~~~Gt~~y~aPE~l~~~~~s~~------sDIwSLG~ll~elltG----------~~Pf~ 706 (782)
+|||+++........ .....||+.|+|||++.+.....+ +|||||||++|+|++| ..||.
T Consensus 184 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~ 263 (337)
T 3mdy_A 184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH 263 (337)
T ss_dssp CCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred EeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHh
Confidence 999999755432221 224579999999999988766554 9999999999999999 77776
Q ss_pred CCCh-----HHHHHHhhccccccCCCC-----CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003978 707 NLNS-----MQVIGAVGFMNQRLEIPK-----DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 765 (782)
Q Consensus 707 ~~~~-----~~~~~~i~~~~~~~~~p~-----~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~ 765 (782)
.... ......+........++. .+++++.+||.+||..||.+|||+.+++++|+++...
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 332 (337)
T 3mdy_A 264 DLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332 (337)
T ss_dssp TTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred hhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence 5421 122222222222333332 4567899999999999999999999999999988653
No 195
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=5.8e-41 Score=389.24 Aligned_cols=257 Identities=33% Similarity=0.595 Sum_probs=223.4
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEEcC-CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVWYG-SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~-~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
.|++..++|++.++||+|+||.||+|.+.+ ..||||+++...... +.+.+|+++|+.++|||||++++++.. ..+
T Consensus 261 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~ 336 (535)
T 2h8h_A 261 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI 336 (535)
T ss_dssp CSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCH---HHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred ceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCH---HHHHHHHHHHHhCCCCCEeeEEEEEee-ccc
Confidence 467778899999999999999999999865 469999998655433 568899999999999999999999876 678
Q ss_pred eEEEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 578 CIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
|||||||.+++|.+++... ...+++..++.++.||+.||+|||+++ ||||||||+||||+.++.+||+|||+++...
T Consensus 337 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 414 (535)
T 2h8h_A 337 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIE 414 (535)
T ss_dssp EEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred eEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence 9999999999999999753 345899999999999999999999999 9999999999999999999999999998654
Q ss_pred ccc-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHHH
Q 003978 657 ETY-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRW 734 (782)
Q Consensus 657 ~~~-~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l 734 (782)
... .......++..|+|||++.+..++.++|||||||+||||++ |..||......+....+. ...+...+..++..+
T Consensus 415 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~-~~~~~~~~~~~~~~l 493 (535)
T 2h8h_A 415 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESL 493 (535)
T ss_dssp CHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHH-TTCCCCCCTTCCHHH
T ss_pred CCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHHH
Confidence 432 12234457889999999999899999999999999999999 999999988877776664 334566778899999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHHHH
Q 003978 735 AAIVESCWHSDPQCRPSFQELVDKLRDL 762 (782)
Q Consensus 735 ~~LI~~cL~~dP~~RPs~~ell~~L~~L 762 (782)
.+||.+||..||++|||+.+|++.|+++
T Consensus 494 ~~li~~cl~~dP~~RPt~~~l~~~L~~~ 521 (535)
T 2h8h_A 494 HDLMCQCWRKEPEERPTFEYLQAFLEDY 521 (535)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 9999999999999999999999887654
No 196
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.6e-40 Score=354.61 Aligned_cols=259 Identities=24% Similarity=0.401 Sum_probs=220.1
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC---C----HHHHHHHHHHHHHHHhCC-CCceeEEeeeee
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY---S----DEVIHSFRQEVSLMKRLR-HPNVLLFMGAVT 572 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~---~----~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~ 572 (782)
..++|++.+.||+|+||.||+|.+ .++.||||++..... . ......+.+|+++++.+. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 457899999999999999999998 467899999976531 1 234567889999999995 999999999999
Q ss_pred cCCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCC
Q 003978 573 SPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLS 652 (782)
Q Consensus 573 ~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla 652 (782)
....+|+||||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+|+||||+||+++.++.+||+|||++
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~ 171 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFS 171 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEEcCCCcEEEecccch
Confidence 999999999999999999999764 46899999999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccCCCCCCcccCccccc------CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCC
Q 003978 653 RLKHETYLTTKTGKGTPQWMAPEVLR------NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEI 726 (782)
Q Consensus 653 ~~~~~~~~~~~~~~Gt~~y~aPE~l~------~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~ 726 (782)
....... ......|++.|+|||++. ...++.++|||||||++|+|++|..||...+.......+.........
T Consensus 172 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 250 (298)
T 1phk_A 172 CQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 250 (298)
T ss_dssp EECCTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT
T ss_pred hhcCCCc-ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCc
Confidence 7654332 233457899999999985 456788999999999999999999999988877666555433322222
Q ss_pred C--CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 727 P--KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 727 p--~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
+ ..++..+.+||.+||..||.+|||+.++ ++|+||+...
T Consensus 251 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l------l~h~~~~~~~ 291 (298)
T 1phk_A 251 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEA------LAHPFFQQYV 291 (298)
T ss_dssp TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHH------TTSGGGCTTC
T ss_pred ccccccCHHHHHHHHHHccCCcccCCCHHHH------HhChHhhhcc
Confidence 2 4689999999999999999999999999 6789997653
No 197
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1e-40 Score=369.24 Aligned_cols=255 Identities=24% Similarity=0.375 Sum_probs=214.3
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce---
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL--- 577 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~--- 577 (782)
+.++|.+.+.||+|+||.||+|.+. ++.||||++............+.+|+.+++.++||||+++++++......
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 3479999999999999999999874 77899999987766677778899999999999999999999999877655
Q ss_pred ---eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 578 ---CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 578 ---~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
|+||||+. ++|.+++. ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++.
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMG---MEFSEEKIQYLVYQMLKGLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eeEEEEEcccc-ccHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999996 68888874 34899999999999999999999999 99999999999999999999999999976
Q ss_pred cccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc----------
Q 003978 655 KHETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR---------- 723 (782)
Q Consensus 655 ~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~---------- 723 (782)
.... .....||+.|+|||++.+ ..++.++|||||||++|+|++|..||...+.......+......
T Consensus 194 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 270 (371)
T 4exu_A 194 ADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN 270 (371)
T ss_dssp ---------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCS
T ss_pred cccC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhh
Confidence 5433 234578999999999987 67899999999999999999999999988776655544221110
Q ss_pred -------------------cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 724 -------------------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 724 -------------------~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
...++.+++++.+||.+||..||.+|||+.++ |+|+||+..+.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el------l~hp~f~~~~~ 332 (371)
T 4exu_A 271 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQA------LTHPFFEPFRD 332 (371)
T ss_dssp CHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHH------HTSGGGTTTCC
T ss_pred hhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHH------hcCcccccCCC
Confidence 11234678999999999999999999999999 67899986543
No 198
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2.4e-40 Score=356.58 Aligned_cols=267 Identities=24% Similarity=0.378 Sum_probs=216.0
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEE-cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC--CCceeEEeeeeecCCc
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVW-YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR--HPNVLLFMGAVTSPQR 576 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~-~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~--HpnIv~l~~~~~~~~~ 576 (782)
..+..++|++++.||+|+||.||++.+ .++.||||++............+.+|+.+++.+. ||||+++++++.....
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~ 102 (313)
T 3cek_A 23 MSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 102 (313)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSE
T ss_pred eeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCE
Confidence 345667899999999999999999987 4677999999877777777888999999999997 5999999999999999
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
+|+|||++ +++|.+++... ..+++..++.++.||+.||.|||+++ |+|+||||+|||+++ +.+||+|||++....
T Consensus 103 ~~lv~e~~-~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~ 177 (313)
T 3cek_A 103 IYMVMECG-NIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVD-GMLKLIDFGIANQMQ 177 (313)
T ss_dssp EEEEECCC-SEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEET-TEEEECCCSSSCC--
T ss_pred EEEEEecC-CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcccEEEEC-CeEEEeecccccccc
Confidence 99999954 78999999864 46899999999999999999999998 999999999999965 799999999997654
Q ss_pred cccc--cccCCCCCCcccCcccccC-----------CCCCchhHHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHhhcccc
Q 003978 657 ETYL--TTKTGKGTPQWMAPEVLRN-----------EPSDEKSDVYSFGVILWELATEKIPWDNLNS-MQVIGAVGFMNQ 722 (782)
Q Consensus 657 ~~~~--~~~~~~Gt~~y~aPE~l~~-----------~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~-~~~~~~i~~~~~ 722 (782)
.... ......||+.|+|||++.+ ..++.++|||||||++|+|++|..||..... ......+.....
T Consensus 178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 257 (313)
T 3cek_A 178 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNH 257 (313)
T ss_dssp ------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTS
T ss_pred CccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhccc
Confidence 3221 2234578999999999976 4678899999999999999999999987643 233333333334
Q ss_pred ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcCCCC
Q 003978 723 RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVGDS 777 (782)
Q Consensus 723 ~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~~~~ 777 (782)
...++..++.++.+||.+||..||.+||++.++ +.|+||+.......+.
T Consensus 258 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el------l~h~~~~~~~~~~~~~ 306 (313)
T 3cek_A 258 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL------LAHPYVQIQTHPVNQM 306 (313)
T ss_dssp CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHH------HTSHHHHCC-------
T ss_pred ccCCcccchHHHHHHHHHHccCCcccCcCHHHH------hcCccccCCCCchhhh
Confidence 556777889999999999999999999999999 6789998877665554
No 199
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=360.67 Aligned_cols=261 Identities=30% Similarity=0.502 Sum_probs=218.5
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE------cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW------YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~------~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
...++|++++.||+|+||.||++.+ .++.||||++... .....+.+.+|+.+++.++||||+++++++....
T Consensus 38 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 115 (326)
T 2w1i_A 38 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 115 (326)
T ss_dssp CCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC--
T ss_pred cCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecC
Confidence 3457899999999999999999985 4667999998753 3455678899999999999999999999987654
Q ss_pred --ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCc
Q 003978 576 --RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 653 (782)
Q Consensus 576 --~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~ 653 (782)
.+++||||+++++|.+++......+++..++.++.||+.||.|||+++ |+|+||||+||||+.++.+||+|||++.
T Consensus 116 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dikp~NIli~~~~~~kL~Dfg~~~ 193 (326)
T 2w1i_A 116 RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTK 193 (326)
T ss_dssp --CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred CCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--EeccCCCcceEEEcCCCcEEEecCcchh
Confidence 789999999999999999887677999999999999999999999998 9999999999999999999999999998
Q ss_pred ccccccc---cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH---------------HHH
Q 003978 654 LKHETYL---TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ---------------VIG 715 (782)
Q Consensus 654 ~~~~~~~---~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~---------------~~~ 715 (782)
....... ......++..|+|||++.+..++.++|||||||++|+|++|..||......- .+.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (326)
T 2w1i_A 194 VLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 273 (326)
T ss_dssp ECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred hccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHH
Confidence 6544321 1223457888999999999889999999999999999999999986431110 001
Q ss_pred HhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 716 AVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 716 ~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
...........+..+++++.+||.+||..||.+|||+.++++.|++++.++
T Consensus 274 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l 324 (326)
T 2w1i_A 274 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324 (326)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 111122345567789999999999999999999999999999999998875
No 200
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=6.7e-41 Score=377.23 Aligned_cols=254 Identities=23% Similarity=0.307 Sum_probs=206.5
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC------C
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP------Q 575 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------~ 575 (782)
..+|++++.||+|+||.||+|.+ .++.||||++..... ...+|+++|+.++|||||++++++... .
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~ 126 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 126 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcce
Confidence 35799999999999999999998 477899999875432 234699999999999999999988432 2
Q ss_pred ceeEEEeecCCCCHHHHHh---hcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC-CcEEEEecCC
Q 003978 576 RLCIVTEFLPRGSLFRLLQ---RNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH-WTVKVGDFGL 651 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~---~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~-~~vkL~DFGl 651 (782)
.+++||||+++ +|.+++. .....+++..++.++.||+.||.|||+++ |+||||||+||||+.+ +.+||+|||+
T Consensus 127 ~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 127 YLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred eEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChhhEEEeCCCCeEEeccchh
Confidence 36799999965 7776664 23457899999999999999999999998 9999999999999965 5789999999
Q ss_pred CcccccccccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc--------
Q 003978 652 SRLKHETYLTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-------- 722 (782)
Q Consensus 652 a~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~-------- 722 (782)
++...... ......||+.|+|||++.+. .++.++|||||||+||||++|+.||...+....+..+.....
T Consensus 204 a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 204 AKQLVRGE-PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp CEECCTTC-CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHH
T ss_pred hhhcccCC-CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 98654332 22345789999999999775 689999999999999999999999998876655444322100
Q ss_pred -------ccC------------CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 723 -------RLE------------IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 723 -------~~~------------~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
... ++..+++++.+||.+||..||.+||++.++ +.|+||+..+..
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~------l~hp~f~~~~~~ 346 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEA------CAHSFFDELRDP 346 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHH------HTSGGGGGGGCT
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHH------hCCHhhcccccc
Confidence 011 234678999999999999999999999999 678999876544
No 201
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=3.4e-41 Score=373.01 Aligned_cols=255 Identities=26% Similarity=0.358 Sum_probs=199.4
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC------C
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP------Q 575 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------~ 575 (782)
.++|++++.||+|+||.||+|.+ .++.||||++............+.+|+.+|+.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 47899999999999999999987 467899999977655666678889999999999999999999998654 5
Q ss_pred ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
.+|++|||+ +++|.+++.. ..+++..++.++.||+.||.|||++| |+||||||+||||+.++.+||+|||+++..
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp CCEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECC-------
T ss_pred eEEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 679999999 7899999875 46899999999999999999999999 999999999999999999999999999765
Q ss_pred ccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc-----------
Q 003978 656 HETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR----------- 723 (782)
Q Consensus 656 ~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~----------- 723 (782)
... .....||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+....+..+......
T Consensus 183 ~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~ 259 (367)
T 2fst_X 183 ADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259 (367)
T ss_dssp -----------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCC
T ss_pred ccc---CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 432 234578999999999987 67899999999999999999999999988776555443221100
Q ss_pred ----------c--------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 724 ----------L--------EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 724 ----------~--------~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
. .+...+++.+.+||.+||..||.+|||+.++ |.|+||+....
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~------L~hp~~~~~~~ 320 (367)
T 2fst_X 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA------LAHAYFAQYHD 320 (367)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHH------HTSGGGTTTCC
T ss_pred HHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHH------hcChhhhhccC
Confidence 0 1123568899999999999999999999999 67899986544
No 202
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=5.4e-42 Score=380.20 Aligned_cols=249 Identities=16% Similarity=0.185 Sum_probs=200.4
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC-CHHHHHHHHHHHH---HHHhCCCCceeEEe-------ee
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY-SDEVIHSFRQEVS---LMKRLRHPNVLLFM-------GA 570 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~-~~~~~~~~~~Ei~---il~~l~HpnIv~l~-------~~ 570 (782)
.++|++.+.||+|+||.||+|.+ .++.||||++..... .....+.+.+|+. +|+.++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 47899999999999999999986 478899999986533 3345678889994 55555899999998 55
Q ss_pred eecCC-----------------ceeEEEeecCCCCHHHHHhhcC------CcchHHHHHHHHHHHHHHHHhhhcCCCCee
Q 003978 571 VTSPQ-----------------RLCIVTEFLPRGSLFRLLQRNT------TKLDWRRRILMALDIARGVSYLHHCNPPII 627 (782)
Q Consensus 571 ~~~~~-----------------~~~lv~E~~~ggsL~~~l~~~~------~~l~~~~~~~i~~qll~aL~~LH~~~~~iv 627 (782)
++.++ ..||+|||| +|+|.+++.... ..+++..++.++.||+.||+|||+++ |+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--iv 228 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--LV 228 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT--EE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC--ee
Confidence 55443 278999999 679999997542 23445888889999999999999999 99
Q ss_pred ecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCCCCCcccCcccccCC-----------CCCchhHHHHHHHHHH
Q 003978 628 HRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNE-----------PSDEKSDVYSFGVILW 696 (782)
Q Consensus 628 HrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-----------~~s~~sDIwSLG~ll~ 696 (782)
||||||+||||+.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||++|
T Consensus 229 HrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ 304 (377)
T 3byv_A 229 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGA---RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIY 304 (377)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTC---EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHH
T ss_pred cCCCCHHHEEEcCCCCEEEEechhheecCC---cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHH
Confidence 999999999999999999999999985443 2335567 999999999887 8999999999999999
Q ss_pred HHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 697 ELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 697 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
+|++|..||......... ......+..+++++.+||.+||..||.+|||+.++ ++|+||+...
T Consensus 305 elltg~~Pf~~~~~~~~~------~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~------l~hp~f~~~~ 367 (377)
T 3byv_A 305 WIWCADLPITKDAALGGS------EWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQA------METPEYEQLR 367 (377)
T ss_dssp HHHHSSCCC------CCS------GGGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHH------HTSHHHHHHH
T ss_pred HHHHCCCCCcccccccch------hhhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHH------hhChHHHHHH
Confidence 999999999765433221 11223346789999999999999999999999999 5567776544
No 203
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=3.2e-40 Score=351.68 Aligned_cols=257 Identities=22% Similarity=0.312 Sum_probs=212.1
Q ss_pred cccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeee-ecCCceeE
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAV-TSPQRLCI 579 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~-~~~~~~~l 579 (782)
..++|++.+.||+|+||.||+|.+ .++.||||++...... ..+.+|+.+++.+.|++++..+.++ ......++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC----CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch----hHHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence 347899999999999999999996 5778999998765443 2477899999999988766655554 56677899
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc---CCCcEEEEecCCCcccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD---KHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~---~~~~vkL~DFGla~~~~ 656 (782)
||||+ +++|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+ .++.+||+|||++....
T Consensus 83 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 159 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence 99999 89999999866678999999999999999999999999 99999999999994 78899999999998654
Q ss_pred cccc-------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh---HHHHHHhhc---cccc
Q 003978 657 ETYL-------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS---MQVIGAVGF---MNQR 723 (782)
Q Consensus 657 ~~~~-------~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~---~~~~~~i~~---~~~~ 723 (782)
.... ......||+.|+|||++.+..++.++|||||||++|+|++|..||..... ......+.. ....
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (296)
T 3uzp_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 239 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch
Confidence 4322 12455799999999999999999999999999999999999999986432 122222211 1111
Q ss_pred cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 724 LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 724 ~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
..++..+++++.+||.+||..||.+|||+.++++.|+++....
T Consensus 240 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 240 EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 2234678999999999999999999999999999998886654
No 204
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.2e-40 Score=391.53 Aligned_cols=259 Identities=26% Similarity=0.478 Sum_probs=218.6
Q ss_pred cccceeEe-eeeccCCcEEEEEEEEc----CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 503 LWEDLTIG-EQIGQGSCGTVYHAVWY----GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 503 ~~~~y~i~-~~IG~G~~G~Vy~~~~~----~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
....+.+. ++||+|+||.||+|.+. ++.||||+++.........+.+.+|+++|+.++|||||++++++.. ..+
T Consensus 366 ~~~~~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~ 444 (635)
T 4fl3_A 366 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESW 444 (635)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSE
T ss_pred cchhccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCE
Confidence 33445554 48999999999999763 3569999998765555566789999999999999999999999974 568
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccc
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~ 657 (782)
++|||||.+++|.+++... ..+++..++.++.||+.||+|||+++ ||||||||+||||+.++.+||+|||+++....
T Consensus 445 ~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~--iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~ 521 (635)
T 4fl3_A 445 MLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRA 521 (635)
T ss_dssp EEEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC
T ss_pred EEEEEccCCCCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHHHCC--EeCCCCChHhEEEeCCCCEEEEEcCCcccccc
Confidence 9999999999999999764 46899999999999999999999999 99999999999999999999999999976543
Q ss_pred cc---ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCCCHH
Q 003978 658 TY---LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPR 733 (782)
Q Consensus 658 ~~---~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~ 733 (782)
.. .......+|+.|+|||++.+..++.++|||||||+||||++ |..||...+.......+. .......+..++++
T Consensus 522 ~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~-~~~~~~~p~~~~~~ 600 (635)
T 4fl3_A 522 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-KGERMGCPAGCPRE 600 (635)
T ss_dssp -------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-TTCCCCCCTTCCHH
T ss_pred CccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHH
Confidence 22 12233457889999999999999999999999999999998 999999998887776664 34456778889999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 734 WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 734 l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
+.+||.+||..||++||++.+|++.|+++...+
T Consensus 601 l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l 633 (635)
T 4fl3_A 601 MYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 633 (635)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999988776554
No 205
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.1e-40 Score=365.55 Aligned_cols=256 Identities=24% Similarity=0.365 Sum_probs=213.4
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC-----Cc
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP-----QR 576 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-----~~ 576 (782)
..+|+++++||+|+||.||+|.+ .+..||||++.... .......+.+|+++|+.++||||+++++++... ..
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc-CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 36899999999999999999987 46679999987533 445567888999999999999999999998654 36
Q ss_pred eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 577 LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 577 ~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
+|+||||+. ++|.+++... .+++..++.++.||+.||.|||++| |+||||||+||||+.++.+||+|||+++...
T Consensus 105 ~~iv~e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEEEEECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEcccC-cCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 899999996 5999999753 5899999999999999999999999 9999999999999999999999999998654
Q ss_pred ccccc---ccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc---------
Q 003978 657 ETYLT---TKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR--------- 723 (782)
Q Consensus 657 ~~~~~---~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~--------- 723 (782)
..... .....||+.|+|||++.+ ..++.++|||||||++|+|++|..||...+....+..+......
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 259 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTC
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHh
Confidence 33221 234579999999998754 55899999999999999999999999887766555443211100
Q ss_pred --------------------cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 724 --------------------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 724 --------------------~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
..+.+.+++++.+||.+||..||.+|||+.++ |.|+||+...
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~------l~hp~~~~~~ 321 (364)
T 3qyz_A 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA------LAHPYLEQYY 321 (364)
T ss_dssp CCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHH------HTSGGGTTTC
T ss_pred hhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHH------hcCcchhhcc
Confidence 11225678999999999999999999999999 6789998753
No 206
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=3.2e-40 Score=351.39 Aligned_cols=256 Identities=22% Similarity=0.313 Sum_probs=208.3
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeee-ecCCceeEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAV-TSPQRLCIV 580 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~-~~~~~~~lv 580 (782)
.++|++.+.||+|+||.||+|.+ .++.||||++...... ..+.+|+.+++.+.|++++..+..+ ......++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C----CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc----hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 46899999999999999999996 5678999987654332 3467899999999988777666555 666778999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE---cCCCcEEEEecCCCccccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV---DKHWTVKVGDFGLSRLKHE 657 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl---~~~~~vkL~DFGla~~~~~ 657 (782)
|||+ +++|.+++......+++..++.++.||+.||.|||+++ |+||||||+|||| +.++.+||+|||+++....
T Consensus 84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp EECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred EEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 9999 89999999876677999999999999999999999999 9999999999999 7889999999999986544
Q ss_pred ccc-------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH---HHHHHhhc---ccccc
Q 003978 658 TYL-------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM---QVIGAVGF---MNQRL 724 (782)
Q Consensus 658 ~~~-------~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~---~~~~~i~~---~~~~~ 724 (782)
... ......||+.|+|||++.+..++.++|||||||++|+|++|..||...... .....+.. .....
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE 240 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHH
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhh
Confidence 321 223557999999999999999999999999999999999999999765332 12212111 11112
Q ss_pred CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHH
Q 003978 725 EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 766 (782)
Q Consensus 725 ~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~ 766 (782)
.....+++++.+||.+||..||++|||+.++++.|+++....
T Consensus 241 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~ 282 (296)
T 4hgt_A 241 VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred hhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence 233678999999999999999999999999999999887765
No 207
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=8.1e-41 Score=360.29 Aligned_cols=255 Identities=23% Similarity=0.351 Sum_probs=204.5
Q ss_pred ccceeEe-eeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCceeE
Q 003978 504 WEDLTIG-EQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 504 ~~~y~i~-~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~l 579 (782)
.+.|++. +.||+|+||.||+|.+ .++.||||++...... ....+.+|++++..+ +||||+++++++...+.+|+
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~l 88 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGH--IRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYL 88 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSC--CHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcch--hHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 3578885 7899999999999987 5778999999765432 245778899999985 79999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc---EEEEecCCCcccc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT---VKVGDFGLSRLKH 656 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~---vkL~DFGla~~~~ 656 (782)
|||||++++|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+||||+.++. +||+|||++....
T Consensus 89 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 165 (316)
T 2ac3_A 89 VFEKMRGGSILSHIHKR-RHFNELEASVVVQDVASALDFLHNKG--IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK 165 (316)
T ss_dssp EEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred EEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC--ceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence 99999999999999765 46899999999999999999999998 999999999999988765 9999999987543
Q ss_pred ccc-------ccccCCCCCCcccCcccccC-----CCCCchhHHHHHHHHHHHHHcCCCCCCCCCh--------------
Q 003978 657 ETY-------LTTKTGKGTPQWMAPEVLRN-----EPSDEKSDVYSFGVILWELATEKIPWDNLNS-------------- 710 (782)
Q Consensus 657 ~~~-------~~~~~~~Gt~~y~aPE~l~~-----~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~-------------- 710 (782)
... .......||+.|+|||++.+ ..++.++|||||||++|+|++|..||.....
T Consensus 166 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 245 (316)
T 2ac3_A 166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPAC 245 (316)
T ss_dssp ----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHH
T ss_pred cCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhH
Confidence 211 11223469999999999975 4578899999999999999999999976542
Q ss_pred -HHHHHHhhccccccCCC----CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 711 -MQVIGAVGFMNQRLEIP----KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 711 -~~~~~~i~~~~~~~~~p----~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
......+. .....++ ..+++++++||.+||..||.+|||+.++ ++|+||+...
T Consensus 246 ~~~~~~~i~--~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~------l~hp~~~~~~ 303 (316)
T 2ac3_A 246 QNMLFESIQ--EGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQV------LQHPWVQGCA 303 (316)
T ss_dssp HHHHHHHHH--HCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH------HHSTTCC---
T ss_pred HHHHHHHHh--ccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHH------hcChhhcCCC
Confidence 12222222 1222333 4689999999999999999999999999 6789997653
No 208
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.6e-40 Score=359.40 Aligned_cols=262 Identities=26% Similarity=0.340 Sum_probs=215.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc---CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC---CCCceeEEeeeee-----
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY---GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL---RHPNVLLFMGAVT----- 572 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~---~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l---~HpnIv~l~~~~~----- 572 (782)
.++|++++.||+|+||.||+|.+. ++.||||++............+.+|+.+++.+ .||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~ 89 (326)
T 1blx_A 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 89 (326)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence 468999999999999999999983 56799999876543322223455677766665 8999999999987
Q ss_pred cCCceeEEEeecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCC
Q 003978 573 SPQRLCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGL 651 (782)
Q Consensus 573 ~~~~~~lv~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGl 651 (782)
....+++||||+. ++|.+++.... ..+++..++.++.||+.||.|||++| |+|+||||+||||+.++.+||+|||+
T Consensus 90 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g--i~H~dlkp~Nili~~~~~~kl~Dfg~ 166 (326)
T 1blx_A 90 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGL 166 (326)
T ss_dssp SEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred CCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCHHHeEEcCCCCEEEecCcc
Confidence 5567899999996 59999997643 34899999999999999999999999 99999999999999999999999999
Q ss_pred CcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc---------
Q 003978 652 SRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ--------- 722 (782)
Q Consensus 652 a~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~--------- 722 (782)
++...... ......||+.|+|||++.+..++.++|||||||++|+|++|..||...........+.....
T Consensus 167 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 245 (326)
T 1blx_A 167 ARIYSFQM-ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 245 (326)
T ss_dssp CCCCCGGG-GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCT
T ss_pred cccccCCC-CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCcc
Confidence 97654332 23356789999999999999999999999999999999999999998887665554421100
Q ss_pred ----------------ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcCC
Q 003978 723 ----------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVG 775 (782)
Q Consensus 723 ----------------~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~~ 775 (782)
...+...++..+.+||.+||..||.+|||+.++ +.|+||+....+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~------l~hp~~~~~~~~~~ 308 (326)
T 1blx_A 246 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA------LSHPYFQDLERCKE 308 (326)
T ss_dssp TCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHH------HTSGGGTTCCCCCC
T ss_pred ccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHH------hcCccccccchhhh
Confidence 112345689999999999999999999999999 67899987765543
No 209
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.3e-40 Score=354.36 Aligned_cols=261 Identities=27% Similarity=0.429 Sum_probs=221.0
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
....++|++++.||+|+||.||+|.. .++.||||++............+.+|+++++.++||||+++++++.....+|
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 44567999999999999999999998 4778999999766544444567889999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC---CcEEEEecCCCccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH---WTVKVGDFGLSRLK 655 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~---~~vkL~DFGla~~~ 655 (782)
+||||+.+++|.+++.... .+++..++.++.||+.||.|||+++ |+|+||||+||+|+.+ +.+||+|||++...
T Consensus 98 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~ 174 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (287)
T ss_dssp EEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTB
T ss_pred EEEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCChhhEEEecCCCcccEEEeccCcceee
Confidence 9999999999999987643 6899999999999999999999998 9999999999999754 47999999998765
Q ss_pred ccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCC--CCCCCHH
Q 003978 656 HETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEI--PKDVDPR 733 (782)
Q Consensus 656 ~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~--p~~~~~~ 733 (782)
..... .....||+.|+|||++.+. ++.++|||||||++|+|++|..||...+.......+......... ...++++
T Consensus 175 ~~~~~-~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (287)
T 2wei_A 175 QQNTK-MKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDD 252 (287)
T ss_dssp CCCSS-CSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHH
T ss_pred cCCCc-cccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHH
Confidence 43321 2233578999999998875 889999999999999999999999988877766665433322222 2568999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 734 WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 734 l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
+.+||.+||..||.+|||+.++ +.|+||+....
T Consensus 253 ~~~li~~~l~~dp~~Rps~~el------l~hp~~~~~~~ 285 (287)
T 2wei_A 253 AKDLIRKMLTFHPSLRITATQC------LEHPWIQKYSS 285 (287)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHH------HHSHHHHHHCC
T ss_pred HHHHHHHHcccChhhCcCHHHH------hcCHHHhcccc
Confidence 9999999999999999999999 67899986543
No 210
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.7e-40 Score=351.33 Aligned_cols=254 Identities=25% Similarity=0.369 Sum_probs=211.5
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec------
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS------ 573 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~------ 573 (782)
....+|++++.||+|+||.||+|.+. ++.||||++.... ..+.+|+++++.++||||+++++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (284)
T 2a19_B 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPE 81 (284)
T ss_dssp HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--
T ss_pred hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcc
Confidence 34578999999999999999999985 7889999997653 346689999999999999999998854
Q ss_pred ----------CCceeEEEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC
Q 003978 574 ----------PQRLCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW 642 (782)
Q Consensus 574 ----------~~~~~lv~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~ 642 (782)
...+|+||||+++++|.+++... ...+++..++.++.||+.||.|||+++ |+|+||||+|||++.++
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~ 159 (284)
T 2a19_B 82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK--LINRDLKPSNIFLVDTK 159 (284)
T ss_dssp -------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETT
T ss_pred cccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCHHHEEEcCCC
Confidence 34589999999999999999754 356899999999999999999999998 99999999999999999
Q ss_pred cEEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc
Q 003978 643 TVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ 722 (782)
Q Consensus 643 ~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~ 722 (782)
.+||+|||++....... ......||+.|+|||++.+..++.++|||||||++|+|++|..||... ......+ .
T Consensus 160 ~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--~~~~~~~----~ 232 (284)
T 2a19_B 160 QVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--SKFFTDL----R 232 (284)
T ss_dssp EEEECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--HHHHHHH----H
T ss_pred CEEECcchhheeccccc-cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--HHHHHHh----h
Confidence 99999999997655432 223457899999999999999999999999999999999999887432 1122122 1
Q ss_pred ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 723 RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 723 ~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
...++..++..+.+||.+||..||.+|||+.++++.|..+.+..-+..
T Consensus 233 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~~ 280 (284)
T 2a19_B 233 DGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKNE 280 (284)
T ss_dssp TTCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC------
T ss_pred cccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCccc
Confidence 234567789999999999999999999999999999988866544433
No 211
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.4e-41 Score=369.49 Aligned_cols=259 Identities=22% Similarity=0.382 Sum_probs=219.2
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCH---------------HHHHHHHHHHHHHHhCCCCcee
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSD---------------EVIHSFRQEVSLMKRLRHPNVL 565 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~---------------~~~~~~~~Ei~il~~l~HpnIv 565 (782)
....++|++++.||+|+||.||+|.+.++.||||++....... .....+.+|+.+++.++||||+
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~ 106 (348)
T 2pml_X 27 DKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCL 106 (348)
T ss_dssp CEEETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBC
T ss_pred ccccCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcc
Confidence 3456799999999999999999999988999999987543211 1126788999999999999999
Q ss_pred EEeeeeecCCceeEEEeecCCCCHHHH------Hhhc-CCcchHHHHHHHHHHHHHHHHhhhc-CCCCeeecCCCCCcEE
Q 003978 566 LFMGAVTSPQRLCIVTEFLPRGSLFRL------LQRN-TTKLDWRRRILMALDIARGVSYLHH-CNPPIIHRDLKSSNLL 637 (782)
Q Consensus 566 ~l~~~~~~~~~~~lv~E~~~ggsL~~~------l~~~-~~~l~~~~~~~i~~qll~aL~~LH~-~~~~ivHrDIKp~NIL 637 (782)
++++++...+.+|+||||+++++|.++ +... ...+++..++.++.||+.||.|||+ +| |+|+||||+|||
T Consensus 107 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~--i~H~dl~p~Nil 184 (348)
T 2pml_X 107 TCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNIL 184 (348)
T ss_dssp CCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC--EECCCCCGGGEE
T ss_pred eEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC--EeecCCChHhEE
Confidence 999999999999999999999999998 5442 4578999999999999999999998 88 999999999999
Q ss_pred EcCCCcEEEEecCCCcccccccccccCCCCCCcccCcccccCC-CCCc-hhHHHHHHHHHHHHHcCCCCCCCCCh-HHHH
Q 003978 638 VDKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNE-PSDE-KSDVYSFGVILWELATEKIPWDNLNS-MQVI 714 (782)
Q Consensus 638 l~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~-~sDIwSLG~ll~elltG~~Pf~~~~~-~~~~ 714 (782)
|+.++.+||+|||++...... ......||+.|+|||++.+. .++. ++|||||||++|+|++|..||..... ....
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 262 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELF 262 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHH
T ss_pred EcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Confidence 999999999999999865443 23455789999999999887 5665 99999999999999999999988766 5555
Q ss_pred HHhhccccccCCC-------------------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 715 GAVGFMNQRLEIP-------------------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 715 ~~i~~~~~~~~~p-------------------~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
..+... ...++ ..+++++.+||.+||..||.+|||+.++ ++|+||+...
T Consensus 263 ~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~------l~hp~f~~~~ 330 (348)
T 2pml_X 263 NNIRTK--NIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDA------LKHEWLADTN 330 (348)
T ss_dssp HHHTSC--CCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHH------HTSGGGTTCC
T ss_pred HHHhcc--CcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHH------hcCccccCCC
Confidence 454322 22333 5689999999999999999999999999 5678887654
No 212
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=4.3e-40 Score=360.26 Aligned_cols=261 Identities=25% Similarity=0.337 Sum_probs=214.4
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC-----C
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP-----Q 575 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~-----~ 575 (782)
..++|++.+.||+|+||.||+|.+. ++.||||++.... .......+.+|+.+++.++||||+++++++... .
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD-KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc-cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 4578999999999999999999985 7789999996433 345567788999999999999999999987654 6
Q ss_pred ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~ 655 (782)
..|+||||+. ++|.+++.. ..+++..++.++.||+.||.|||++| |+||||||+||||+.++.+||+|||++...
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~--ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred eEEEEEeccC-ccHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 7899999996 599999976 35899999999999999999999999 999999999999999999999999999765
Q ss_pred ccccc----------cccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc-
Q 003978 656 HETYL----------TTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR- 723 (782)
Q Consensus 656 ~~~~~----------~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~- 723 (782)
..... ......||+.|+|||++.+ ..++.++|||||||++|+|++|..||...+.......+......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (353)
T 2b9h_A 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP 242 (353)
T ss_dssp C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Confidence 43211 1123478999999998765 67899999999999999999999999988765544332211000
Q ss_pred -----------------------------cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcC
Q 003978 724 -----------------------------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTV 774 (782)
Q Consensus 724 -----------------------------~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~ 774 (782)
...++.+++++.+||.+||..||.+|||+.++ ++|+||+......
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el------l~hp~~~~~~~~~ 316 (353)
T 2b9h_A 243 HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA------LEHPYLQTYHDPN 316 (353)
T ss_dssp CSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHH------HTSGGGTTTCCTT
T ss_pred chhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHH------hcCccccccCCcc
Confidence 01124688999999999999999999999999 6789998776544
Q ss_pred C
Q 003978 775 G 775 (782)
Q Consensus 775 ~ 775 (782)
.
T Consensus 317 ~ 317 (353)
T 2b9h_A 317 D 317 (353)
T ss_dssp S
T ss_pred c
Confidence 3
No 213
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2e-41 Score=374.71 Aligned_cols=257 Identities=12% Similarity=0.078 Sum_probs=194.0
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCC-HHHHHHHHHHHHHHHhC--CCCceeEEe-------eee
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYS-DEVIHSFRQEVSLMKRL--RHPNVLLFM-------GAV 571 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~-~~~~~~~~~Ei~il~~l--~HpnIv~l~-------~~~ 571 (782)
..+|+++++||+|+||.||+|.+ .++.||||++...... ......+.+|+.+++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 34699999999999999999997 4677999999886653 34566777885544444 699988865 333
Q ss_pred ecC-----------------CceeEEEeecCCCCHHHHHhhcCCcchHHHH------HHHHHHHHHHHHhhhcCCCCeee
Q 003978 572 TSP-----------------QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRR------ILMALDIARGVSYLHHCNPPIIH 628 (782)
Q Consensus 572 ~~~-----------------~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~------~~i~~qll~aL~~LH~~~~~ivH 628 (782)
..+ ..+|||||||+ ++|.+++......+++..+ +.++.||+.||+|||+++ |+|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~--ivH 217 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKG--LVH 217 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT--EEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC--Ccc
Confidence 322 33799999997 7999999875444555555 677799999999999999 999
Q ss_pred cCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCCCCCcccCcccccC--CCCCchhHHHHHHHHHHHHHcCCCCCC
Q 003978 629 RDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRN--EPSDEKSDVYSFGVILWELATEKIPWD 706 (782)
Q Consensus 629 rDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~--~~~s~~sDIwSLG~ll~elltG~~Pf~ 706 (782)
|||||+||||+.++.+||+|||+++....... ...+|+.|+|||++.+ ..++.++|||||||+||+|++|..||.
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~ 294 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTRGP---ASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFG 294 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTCEEE---GGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTT
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCCCcc---CccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999986543321 3356799999999987 778999999999999999999999998
Q ss_pred CCChHHHH--HH---hhcc--ccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 707 NLNSMQVI--GA---VGFM--NQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 707 ~~~~~~~~--~~---i~~~--~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
........ .. .... ......+..+++.+.+||.+||..||++|||+.++ |+|+||+....
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~------l~hp~f~~~~~ 361 (371)
T 3q60_A 295 LVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEA------METPEFLQLQN 361 (371)
T ss_dssp BCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHH------TTSHHHHHHHH
T ss_pred CcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHH------hcCHHHHHHHH
Confidence 76432110 00 0001 11122335789999999999999999999999999 67888876543
No 214
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2.1e-41 Score=361.69 Aligned_cols=265 Identities=29% Similarity=0.493 Sum_probs=197.3
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ 575 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 575 (782)
..+.+..++|++.+.||+|+||.||++.+ .++.||||++..... ......+.+|+.+++.++||||+++++++...+
T Consensus 8 ~p~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 86 (303)
T 2vwi_A 8 LPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD 86 (303)
T ss_dssp -----CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSS
T ss_pred cccccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc-chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC
Confidence 34566778999999999999999999986 678899999865432 233467788999999999999999999999999
Q ss_pred ceeEEEeecCCCCHHHHHhh-------cCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEe
Q 003978 576 RLCIVTEFLPRGSLFRLLQR-------NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGD 648 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~-------~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~D 648 (782)
..|+||||+++++|.+++.. ....+++..++.++.||+.||.|||+++ |+|+||||+||+++.++.+||+|
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~d 164 (303)
T 2vwi_A 87 ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG--QIHRDVKAGNILLGEDGSVQIAD 164 (303)
T ss_dssp CEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTCCEEECC
T ss_pred CcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC--CCCCCCChhhEEEcCCCCEEEEe
Confidence 99999999999999999964 2345899999999999999999999998 99999999999999999999999
Q ss_pred cCCCccccccc-----ccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc
Q 003978 649 FGLSRLKHETY-----LTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ 722 (782)
Q Consensus 649 FGla~~~~~~~-----~~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~ 722 (782)
||++....... .......||+.|+|||++.+ ..++.++|||||||++|+|++|..||.................
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 244 (303)
T 2vwi_A 165 FGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP 244 (303)
T ss_dssp CHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSC
T ss_pred ccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCC
Confidence 99987543321 11234578999999999876 5688999999999999999999999988766554433221111
Q ss_pred --------ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 723 --------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 723 --------~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
.......++.++.+||.+||..||.+||++.++ ++|+||+...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l------l~h~~~~~~~ 295 (303)
T 2vwi_A 245 PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL------LRHKFFQKAK 295 (303)
T ss_dssp CCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHH------HTSTTC----
T ss_pred CccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHH------hhChhhhcCC
Confidence 122345688999999999999999999999999 6678887654
No 215
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2e-40 Score=359.33 Aligned_cols=257 Identities=24% Similarity=0.349 Sum_probs=214.5
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE---cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCC------ceeEEeeee
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW---YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHP------NVLLFMGAV 571 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~---~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~Hp------nIv~l~~~~ 571 (782)
+...++|++++.||+|+||.||+|.+ .++.||||+++.. ......+.+|+.+++.++|+ +|+++++++
T Consensus 10 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~ 86 (339)
T 1z57_A 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWF 86 (339)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEE
T ss_pred CCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC---CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccc
Confidence 45567999999999999999999987 4677999998643 34557788899999988655 599999999
Q ss_pred ecCCceeEEEeecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC----------
Q 003978 572 TSPQRLCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK---------- 640 (782)
Q Consensus 572 ~~~~~~~lv~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~---------- 640 (782)
...+.+|+||||+ +++|.+++.... ..+++..++.++.||+.||+|||+++ |+||||||+||||+.
T Consensus 87 ~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~~~~ 163 (339)
T 1z57_A 87 EHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK--LTHTDLKPENILFVQSDYTEAYNPK 163 (339)
T ss_dssp EETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESCCCEEEEEC--
T ss_pred ccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHEEEeccccccccCCc
Confidence 9999999999999 889999997654 36889999999999999999999999 999999999999987
Q ss_pred ---------CCcEEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH
Q 003978 641 ---------HWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM 711 (782)
Q Consensus 641 ---------~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~ 711 (782)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+..
T Consensus 164 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 240 (339)
T 1z57_A 164 IKRDERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK 240 (339)
T ss_dssp --CEEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH
T ss_pred cccccccccCCCceEeeCcccccCccc---cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH
Confidence 668999999999765432 23457899999999999999999999999999999999999999988766
Q ss_pred HHHHHhhccccc------------------------------------------cCCCCCCCHHHHHHHHHhhhhCCCCC
Q 003978 712 QVIGAVGFMNQR------------------------------------------LEIPKDVDPRWAAIVESCWHSDPQCR 749 (782)
Q Consensus 712 ~~~~~i~~~~~~------------------------------------------~~~p~~~~~~l~~LI~~cL~~dP~~R 749 (782)
.....+...... ...+...++++.+||.+||..||.+|
T Consensus 241 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 320 (339)
T 1z57_A 241 EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKR 320 (339)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccc
Confidence 544433211110 01112235789999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhhcccC
Q 003978 750 PSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 750 Ps~~ell~~L~~L~~~~~~~~~~ 772 (782)
||+.++ ++|+||+..+.
T Consensus 321 pt~~el------l~hp~f~~~~~ 337 (339)
T 1z57_A 321 ITLREA------LKHPFFDLLKK 337 (339)
T ss_dssp CCHHHH------TTSGGGGGGGC
T ss_pred cCHHHH------hcCHHHHHHhc
Confidence 999999 67899987654
No 216
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.7e-40 Score=365.26 Aligned_cols=262 Identities=20% Similarity=0.291 Sum_probs=210.9
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE-cCCeEEEEEEeccCC---------CHHHHHHHHHHHHHHHhCCCCceeEEeee
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW-YGSDVAVKVFSRQEY---------SDEVIHSFRQEVSLMKRLRHPNVLLFMGA 570 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~-~~~~vAiK~~~~~~~---------~~~~~~~~~~Ei~il~~l~HpnIv~l~~~ 570 (782)
....++|++++.||+|+||.||+|.+ .+..||||++..... .....+.+.+|+.+++.++||||++++++
T Consensus 18 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 97 (362)
T 3pg1_A 18 HAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDI 97 (362)
T ss_dssp HHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEE
T ss_pred HHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeee
Confidence 45668999999999999999999986 577899999865322 23445788999999999999999999999
Q ss_pred eec-----CCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEE
Q 003978 571 VTS-----PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVK 645 (782)
Q Consensus 571 ~~~-----~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vk 645 (782)
+.. ...+|+||||+. ++|.+++......+++..++.++.||+.||.|||+++ |+|+||||+||||+.++.+|
T Consensus 98 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~NIl~~~~~~~k 174 (362)
T 3pg1_A 98 FVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAG--VVHRDLHPGNILLADNNDIT 174 (362)
T ss_dssp EEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEE
T ss_pred EEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCc--CEecCCChHHEEEcCCCCEE
Confidence 843 346899999996 6999998877677999999999999999999999999 99999999999999999999
Q ss_pred EEecCCCcccccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc-
Q 003978 646 VGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR- 723 (782)
Q Consensus 646 L~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~- 723 (782)
|+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|+|++|..||...........+......
T Consensus 175 l~Dfg~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~ 253 (362)
T 3pg1_A 175 ICDFNLAREDTADA-NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTP 253 (362)
T ss_dssp ECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred EEecCccccccccc-ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCC
Confidence 99999997544332 2234578999999999987 67899999999999999999999999988766655444211110
Q ss_pred -----------------------------cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 724 -----------------------------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 724 -----------------------------~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
...++.+++.+.+||.+||..||.+|||+.++ |+|+||+....
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el------l~hp~f~~~~~ 325 (362)
T 3pg1_A 254 KIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQA------LRHPYFESLFD 325 (362)
T ss_dssp CHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHH------HTSGGGTTTCC
T ss_pred ChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHH------HcCchhhhccC
Confidence 11234578899999999999999999999999 67899987643
No 217
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.4e-40 Score=356.86 Aligned_cols=254 Identities=31% Similarity=0.527 Sum_probs=209.6
Q ss_pred eeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccC--CCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEEeec
Q 003978 507 LTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQE--YSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFL 584 (782)
Q Consensus 507 y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~--~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~E~~ 584 (782)
|..+++||+|+||.||+|.+.++.||||++.... ......+.+.+|+.+++.++||||+++++++...+..|+||||+
T Consensus 33 ~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 112 (307)
T 2nru_A 33 SVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112 (307)
T ss_dssp TTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred cccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEec
Confidence 4455899999999999999999999999987543 23345678899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhc--CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccc--c
Q 003978 585 PRGSLFRLLQRN--TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETY--L 660 (782)
Q Consensus 585 ~ggsL~~~l~~~--~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~--~ 660 (782)
++++|.+++... ...+++..++.++.||+.||.|||+++ |+|+||||+||||+.++.+||+|||++....... .
T Consensus 113 ~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 190 (307)
T 2nru_A 113 PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH--HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190 (307)
T ss_dssp TTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCE
T ss_pred CCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC--eecCCCCHHHEEEcCCCcEEEeecccccccccccccc
Confidence 999999999643 345899999999999999999999998 9999999999999999999999999997654322 1
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHH----HHhhccc---------cccCCC
Q 003978 661 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVI----GAVGFMN---------QRLEIP 727 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~----~~i~~~~---------~~~~~p 727 (782)
......||+.|+|||++.+. ++.++|||||||++|+|++|..||......... ..+.... .....+
T Consensus 191 ~~~~~~g~~~y~aPE~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (307)
T 2nru_A 191 MTSRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDAD 269 (307)
T ss_dssp ECSSCCSCGGGCCHHHHTTE-ECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCC
T ss_pred cccccCCCcCcCChHHhcCC-CCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccc
Confidence 23345799999999998764 788999999999999999999999865432211 1111000 011122
Q ss_pred CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003978 728 KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 763 (782)
Q Consensus 728 ~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~ 763 (782)
..++..+.+||.+||..||.+|||+.++++.|+++.
T Consensus 270 ~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 270 STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 334567999999999999999999999999999874
No 218
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=363.95 Aligned_cols=259 Identities=17% Similarity=0.207 Sum_probs=212.3
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEE-------EcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC---CCceeEE
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAV-------WYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR---HPNVLLF 567 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~-------~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~---HpnIv~l 567 (782)
..++...++|++.++||+|+||.||+|. ..++.||||+++... ...+..|+++++.+. |+||+++
T Consensus 58 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~l~~~~~~~iv~~ 132 (365)
T 3e7e_A 58 TEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN-----PWEFYIGTQLMERLKPSMQHMFMKF 132 (365)
T ss_dssp CEEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC-----HHHHHHHHHHHHHSCGGGGGGBCCE
T ss_pred eeEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC-----hhHHHHHHHHHHHhhhhhhhhhhhh
Confidence 3455667899999999999999999993 357789999986543 245677888888886 9999999
Q ss_pred eeeeecCCceeEEEeecCCCCHHHHHhh----cCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC---
Q 003978 568 MGAVTSPQRLCIVTEFLPRGSLFRLLQR----NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK--- 640 (782)
Q Consensus 568 ~~~~~~~~~~~lv~E~~~ggsL~~~l~~----~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~--- 640 (782)
++++...+..|+|||||++|+|.+++.. ....+++..++.++.||+.||+|||+++ ||||||||+||||+.
T Consensus 133 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~--ivHrDiKp~NIll~~~~~ 210 (365)
T 3e7e_A 133 YSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE--IIHGDIKPDNFILGNGFL 210 (365)
T ss_dssp EEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECGGGT
T ss_pred heeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC--eecCCCCHHHEEeccccc
Confidence 9999999999999999999999999975 3456999999999999999999999998 999999999999998
Q ss_pred --------CCcEEEEecCCCcccc--cccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh
Q 003978 641 --------HWTVKVGDFGLSRLKH--ETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS 710 (782)
Q Consensus 641 --------~~~vkL~DFGla~~~~--~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~ 710 (782)
++.+||+|||+++... .........+||+.|+|||++.+..++.++|||||||++|+|++|+.||.....
T Consensus 211 ~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~ 290 (365)
T 3e7e_A 211 EQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEG 290 (365)
T ss_dssp CC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEET
T ss_pred CccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCC
Confidence 8999999999997543 122233456799999999999999999999999999999999999999964432
Q ss_pred HHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCC-CCHHHHHHHHHHHHHHHhhc
Q 003978 711 MQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCR-PSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 711 ~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~R-Ps~~ell~~L~~L~~~~~~~ 769 (782)
.. ............+..+.+++..||..+|.+| |++.++.+.|+++...-+..
T Consensus 291 ~~------~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~~~ 344 (365)
T 3e7e_A 291 GE------CKPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHYTN 344 (365)
T ss_dssp TE------EEECSCCTTCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHTTT
T ss_pred Cc------eeechhccccCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhhhh
Confidence 11 0000111111346789999999999999998 57889888888877665543
No 219
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.2e-41 Score=368.61 Aligned_cols=260 Identities=30% Similarity=0.486 Sum_probs=208.5
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEE-cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCce
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVW-YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRL 577 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~-~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 577 (782)
..+...++|++.+.||+|+||.||+|.. .++.||||++....... ....+.+|+++++.++||||+++++++......
T Consensus 24 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 102 (326)
T 3uim_A 24 ELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQG-GELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 102 (326)
T ss_dssp HHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCC
T ss_pred HHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCch-HHHHHHHHHHHHHhccCCCccceEEEEecCCce
Confidence 3455678999999999999999999986 47789999987543221 123578899999999999999999999999999
Q ss_pred eEEEeecCCCCHHHHHhhcC---CcchHHHHHHHHHHHHHHHHhhhcC---CCCeeecCCCCCcEEEcCCCcEEEEecCC
Q 003978 578 CIVTEFLPRGSLFRLLQRNT---TKLDWRRRILMALDIARGVSYLHHC---NPPIIHRDLKSSNLLVDKHWTVKVGDFGL 651 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~---~~l~~~~~~~i~~qll~aL~~LH~~---~~~ivHrDIKp~NILl~~~~~vkL~DFGl 651 (782)
++|||||.+++|.+++.... ..+++..++.++.||+.||.|||++ + |+||||||+||||+.++.+||+|||+
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~--ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 180 (326)
T 3uim_A 103 LLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK--IIHRDVKAANILLDEEFEAVVGDFGL 180 (326)
T ss_dssp EEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSC--EECCCCSGGGEEECTTCCEEECCCSS
T ss_pred EEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEeCCCchhhEEECCCCCEEeccCcc
Confidence 99999999999999997543 3489999999999999999999998 8 99999999999999999999999999
Q ss_pred Cccccccc-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCC-----ChHHHHHHhhccccc--
Q 003978 652 SRLKHETY-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNL-----NSMQVIGAVGFMNQR-- 723 (782)
Q Consensus 652 a~~~~~~~-~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~-----~~~~~~~~i~~~~~~-- 723 (782)
++...... .......||+.|+|||++.+..++.++|||||||++|+|++|..||... ........+......
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (326)
T 3uim_A 181 AKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 260 (326)
T ss_dssp CEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCC
T ss_pred ccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchh
Confidence 98654322 2233456999999999999888999999999999999999999999521 111111111100000
Q ss_pred ----------cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003978 724 ----------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRD 761 (782)
Q Consensus 724 ----------~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~ 761 (782)
...+...+..+.+||.+||..||.+|||+.+++++|+.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 261 LEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp STTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred hhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 11112234679999999999999999999999998864
No 220
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=6.8e-41 Score=377.06 Aligned_cols=257 Identities=27% Similarity=0.432 Sum_probs=202.2
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCC------HHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYS------DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS 573 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~------~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~ 573 (782)
...++|.+.++||+|+||.||+|.+. ++.||||++...... ......+.+|+.+|+.++|||||++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 45678999999999999999999984 578999999865421 1223457889999999999999999999864
Q ss_pred CCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC---cEEEEecC
Q 003978 574 PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW---TVKVGDFG 650 (782)
Q Consensus 574 ~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~---~vkL~DFG 650 (782)
..+|+|||||++++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++ .+||+|||
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~--ivHrDlkp~NIll~~~~~~~~~kl~DFG 287 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFG 287 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred -CceEEEEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEecCCCcceEEEeecc
Confidence 4589999999999999988654 46899999999999999999999998 99999999999997544 59999999
Q ss_pred CCcccccccccccCCCCCCcccCcccccC---CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH-HHHHhhccc--ccc
Q 003978 651 LSRLKHETYLTTKTGKGTPQWMAPEVLRN---EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ-VIGAVGFMN--QRL 724 (782)
Q Consensus 651 la~~~~~~~~~~~~~~Gt~~y~aPE~l~~---~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~-~~~~i~~~~--~~~ 724 (782)
+++...... .....+||+.|+|||++.+ ..++.++|||||||++|+|++|..||....... ....+.... ..+
T Consensus 288 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~ 366 (419)
T 3i6u_A 288 HSKILGETS-LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 366 (419)
T ss_dssp TTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCH
T ss_pred cceecCCCc-cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCc
Confidence 998765432 2335679999999999864 567889999999999999999999997654332 222221111 112
Q ss_pred CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 725 EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 725 ~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
.....+++.+.+||.+||..||.+|||+.++ |+|+||+.
T Consensus 367 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~------l~hp~~~~ 405 (419)
T 3i6u_A 367 EVWAEVSEKALDLVKKLLVVDPKARFTTEEA------LRHPWLQD 405 (419)
T ss_dssp HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH------HHSGGGCC
T ss_pred hhhcccCHHHHHHHHHHccCChhHCcCHHHH------hCCcccCC
Confidence 2235689999999999999999999999999 67899864
No 221
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2e-40 Score=357.37 Aligned_cols=258 Identities=22% Similarity=0.296 Sum_probs=209.1
Q ss_pred cccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeee----cC
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT----SP 574 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~----~~ 574 (782)
.+..++|++++.||+|+||.||++.. .++.||||++... .......+.+|+.+++.++||||+++++++. ..
T Consensus 25 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 102 (317)
T 2buj_A 25 IIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAK 102 (317)
T ss_dssp EETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTE
T ss_pred EECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC--CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCC
Confidence 34567899999999999999999997 5778999998653 3455678899999999999999999999986 34
Q ss_pred CceeEEEeecCCCCHHHHHhh---cCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCC
Q 003978 575 QRLCIVTEFLPRGSLFRLLQR---NTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGL 651 (782)
Q Consensus 575 ~~~~lv~E~~~ggsL~~~l~~---~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGl 651 (782)
..+|+||||+.+++|.+++.. ....+++..++.++.||+.||.|||+++ |+|+||||+||||+.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~dlkp~NIl~~~~~~~kl~dfg~ 180 (317)
T 2buj_A 103 HEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG--YAHRDLKPTNILLGDEGQPVLMDLGS 180 (317)
T ss_dssp EEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTSCEEECCCSS
T ss_pred ceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEcCCCCEEEEecCc
Confidence 578999999999999999975 3567899999999999999999999998 99999999999999999999999999
Q ss_pred Ccccccccc---------cccCCCCCCcccCcccccCCC---CCchhHHHHHHHHHHHHHcCCCCCCCCCh--HHHHHHh
Q 003978 652 SRLKHETYL---------TTKTGKGTPQWMAPEVLRNEP---SDEKSDVYSFGVILWELATEKIPWDNLNS--MQVIGAV 717 (782)
Q Consensus 652 a~~~~~~~~---------~~~~~~Gt~~y~aPE~l~~~~---~s~~sDIwSLG~ll~elltG~~Pf~~~~~--~~~~~~i 717 (782)
+........ ......||+.|+|||++.+.. ++.++|||||||++|+|++|..||..... ......+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 260 (317)
T 2buj_A 181 MNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV 260 (317)
T ss_dssp CEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH
T ss_pred chhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh
Confidence 875432111 011235799999999998664 58899999999999999999999953211 0111111
Q ss_pred hccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHH
Q 003978 718 GFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 763 (782)
Q Consensus 718 ~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~ 763 (782)
. .......+..++.++.+||.+||..||.+|||+.+++++|++++
T Consensus 261 ~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 261 Q-NQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp H-CC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred h-ccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 1 12233445678999999999999999999999999999988774
No 222
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.4e-40 Score=369.50 Aligned_cols=257 Identities=22% Similarity=0.303 Sum_probs=207.3
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEc-CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc---
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWY-GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR--- 576 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~-~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~--- 576 (782)
+....+|+++++||+|+||.||+|.+. +..||+|.+..... ...+|+++|+.++|||||++++++.....
T Consensus 36 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~ 109 (394)
T 4e7w_A 36 EQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKD 109 (394)
T ss_dssp CEEEEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSS
T ss_pred CcccceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCC
Confidence 344568999999999999999999984 44588888765432 12369999999999999999999854433
Q ss_pred ---eeEEEeecCCCCHHHHHh---hcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc-CCCcEEEEec
Q 003978 577 ---LCIVTEFLPRGSLFRLLQ---RNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD-KHWTVKVGDF 649 (782)
Q Consensus 577 ---~~lv~E~~~ggsL~~~l~---~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~-~~~~vkL~DF 649 (782)
+|+|||||++ ++...+. .....+++..++.++.||+.||.|||++| |+||||||+||||+ .++.+||+||
T Consensus 110 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~~~~~kL~DF 186 (394)
T 4e7w_A 110 EVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG--ICHRDIKPQNLLLDPPSGVLKLIDF 186 (394)
T ss_dssp CEEEEEEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEETTTTEEEECCC
T ss_pred ceEEEEEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCCHHHEEEcCCCCcEEEeeC
Confidence 7899999976 5544432 23456899999999999999999999999 99999999999999 7999999999
Q ss_pred CCCcccccccccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccc-----
Q 003978 650 GLSRLKHETYLTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQR----- 723 (782)
Q Consensus 650 Gla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~----- 723 (782)
|+++...... ......||+.|+|||++.+. .++.++|||||||++|+|++|..||...+....+..+......
T Consensus 187 G~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~ 265 (394)
T 4e7w_A 187 GSAKILIAGE-PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQ 265 (394)
T ss_dssp TTCEECCTTC-CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred CCcccccCCC-CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 9998654332 23355789999999999775 4899999999999999999999999988776655443221100
Q ss_pred ----------------------cCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 724 ----------------------LEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 724 ----------------------~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
..++..+++++.+||.+||..||.+|||+.++ +.|+||+..+..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~------l~hp~f~~~~~~ 331 (394)
T 4e7w_A 266 IKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEA------LCHPFFDELRTG 331 (394)
T ss_dssp HHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHH------HTSGGGSTTTSS
T ss_pred HHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHH------hcChhhhhhccc
Confidence 01334588999999999999999999999999 679999876553
No 223
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=362.64 Aligned_cols=256 Identities=14% Similarity=0.190 Sum_probs=210.1
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc----------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeE-----
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY----------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLL----- 566 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~----------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~----- 566 (782)
...++|++.+.||+|+||.||+|.+. ++.||||++... ..+.+|+++++.++||||++
T Consensus 39 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~ 111 (352)
T 2jii_A 39 KSGRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKL 111 (352)
T ss_dssp TTSCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred ccCCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhh
Confidence 34579999999999999999999874 568999998754 35778999999999999988
Q ss_pred ----------Eeeeeec-CCceeEEEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCC
Q 003978 567 ----------FMGAVTS-PQRLCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSS 634 (782)
Q Consensus 567 ----------l~~~~~~-~~~~~lv~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~ 634 (782)
+++++.. ...+|+||||| +++|.+++... ...+++..++.++.||+.||.|||+++ |+||||||+
T Consensus 112 ~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dikp~ 188 (352)
T 2jii_A 112 YSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE--YVHGNVTAE 188 (352)
T ss_dssp TTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCCGG
T ss_pred ccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCHH
Confidence 5556554 67889999999 99999999865 357999999999999999999999998 999999999
Q ss_pred cEEEcCCC--cEEEEecCCCcccccccc-------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCC
Q 003978 635 NLLVDKHW--TVKVGDFGLSRLKHETYL-------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPW 705 (782)
Q Consensus 635 NILl~~~~--~vkL~DFGla~~~~~~~~-------~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf 705 (782)
||||+.++ .+||+|||+++....... ......||+.|+|||++.+..++.++|||||||+||+|++|..||
T Consensus 189 NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 268 (352)
T 2jii_A 189 NIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPW 268 (352)
T ss_dssp GEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTT
T ss_pred HEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 99999998 899999999976543221 113347999999999999999999999999999999999999999
Q ss_pred CCCC--hHHHHHHhhc-cccccCCC------CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHh
Q 003978 706 DNLN--SMQVIGAVGF-MNQRLEIP------KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 767 (782)
Q Consensus 706 ~~~~--~~~~~~~i~~-~~~~~~~p------~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~ 767 (782)
.... .......... ......++ ..++.++.+||.+||..||.+|||+.++++.|+++....-
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 269 TNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp GGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred ccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 8764 2222222211 11111111 2568999999999999999999999999999999877654
No 224
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.2e-40 Score=369.62 Aligned_cols=253 Identities=21% Similarity=0.294 Sum_probs=204.7
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC--------CCceeEEeeee
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR--------HPNVLLFMGAV 571 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~--------HpnIv~l~~~~ 571 (782)
...++|+++++||+|+||.||+|.+ .++.||||++... ......+.+|+.+|+.+. |+||+++++++
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~ 110 (397)
T 1wak_A 34 LFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDF 110 (397)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEE
T ss_pred hcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC---CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecce
Confidence 4457899999999999999999987 4677999998643 445577889999999985 78899999998
Q ss_pred e----cCCceeEEEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcC-CCCeeecCCCCCcEEEcCCC---
Q 003978 572 T----SPQRLCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHC-NPPIIHRDLKSSNLLVDKHW--- 642 (782)
Q Consensus 572 ~----~~~~~~lv~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~-~~~ivHrDIKp~NILl~~~~--- 642 (782)
. ....+|+||||+ +++|.+++... ...+++..++.++.||+.||.|||++ | |+||||||+||||+.++
T Consensus 111 ~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g--ivHrDikp~NIll~~~~~~~ 187 (397)
T 1wak_A 111 KISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR--IIHTDIKPENILLSVNEQYI 187 (397)
T ss_dssp EEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC--EECCCCSGGGEEECCCHHHH
T ss_pred eecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHeeEeccchhh
Confidence 7 556799999999 66777666543 35699999999999999999999998 8 99999999999998775
Q ss_pred ----------------------------------------------cEEEEecCCCcccccccccccCCCCCCcccCccc
Q 003978 643 ----------------------------------------------TVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEV 676 (782)
Q Consensus 643 ----------------------------------------------~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~ 676 (782)
.+||+|||+++..... .....||+.|+|||+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHH
T ss_pred hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCChh
Confidence 7999999999865543 234578999999999
Q ss_pred ccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh------HHHHHHhhcccc----------------------------
Q 003978 677 LRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS------MQVIGAVGFMNQ---------------------------- 722 (782)
Q Consensus 677 l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~------~~~~~~i~~~~~---------------------------- 722 (782)
+.+..++.++|||||||+||+|++|..||...+. ......+.....
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 9999999999999999999999999999976542 111111110000
Q ss_pred ------------ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhc
Q 003978 723 ------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQA 769 (782)
Q Consensus 723 ------------~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~ 769 (782)
....+...++.+.+||.+||..||.+|||+.++ |+|+||+.
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~------l~hp~~~~ 397 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAEC------LRHPWLNS 397 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHH------HTSGGGGC
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHH------hhCccccC
Confidence 001122335678999999999999999999999 67899863
No 225
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3.9e-40 Score=358.66 Aligned_cols=256 Identities=32% Similarity=0.551 Sum_probs=211.1
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHh--CCCCceeEEeeeeecCC---
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKR--LRHPNVLLFMGAVTSPQ--- 575 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~--l~HpnIv~l~~~~~~~~--- 575 (782)
....++|++.+.||+|+||.||++.+.++.||||++.... ...+.+|+++++. ++||||+++++++....
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGGG-----HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCchh-----HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 4556799999999999999999999999999999986432 3566788999988 68999999999998776
Q ss_pred -ceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhh--------cCCCCeeecCCCCCcEEEcCCCcEEE
Q 003978 576 -RLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLH--------HCNPPIIHRDLKSSNLLVDKHWTVKV 646 (782)
Q Consensus 576 -~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH--------~~~~~ivHrDIKp~NILl~~~~~vkL 646 (782)
.+|+||||+++++|.+++... .+++..++.++.||+.||.||| +++ |+||||||+||||+.++.+||
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dlkp~NIll~~~~~~kL 188 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA--IAHRDLKSKNILVKKNGTCCI 188 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE--EECSCCSGGGEEECTTSCEEE
T ss_pred ceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC--eeeCCCCHHHEEECCCCCEEE
Confidence 789999999999999999754 5899999999999999999999 778 999999999999999999999
Q ss_pred EecCCCcccccccc----cccCCCCCCcccCcccccCCCC------CchhHHHHHHHHHHHHHcC----------CCCCC
Q 003978 647 GDFGLSRLKHETYL----TTKTGKGTPQWMAPEVLRNEPS------DEKSDVYSFGVILWELATE----------KIPWD 706 (782)
Q Consensus 647 ~DFGla~~~~~~~~----~~~~~~Gt~~y~aPE~l~~~~~------s~~sDIwSLG~ll~elltG----------~~Pf~ 706 (782)
+|||++........ ......||+.|+|||++.+... +.++|||||||++|+|++| ..||.
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~ 268 (342)
T 1b6c_B 189 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 268 (342)
T ss_dssp CCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred EECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCcc
Confidence 99999976544321 2234579999999999987632 3689999999999999999 88997
Q ss_pred CCCh-----HHHHHHhhccccccCCCC-----CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003978 707 NLNS-----MQVIGAVGFMNQRLEIPK-----DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 765 (782)
Q Consensus 707 ~~~~-----~~~~~~i~~~~~~~~~p~-----~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~ 765 (782)
.... ......+......+.++. .++..+.+||.+||..||.+|||+.+++++|+++..+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 269 DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp TTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 6532 222223322222333332 2346899999999999999999999999999998764
No 226
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=4.6e-40 Score=360.94 Aligned_cols=255 Identities=24% Similarity=0.375 Sum_probs=212.9
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc----
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR---- 576 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~---- 576 (782)
..++|.+.+.||+|+||.||+|.+. ++.||||++............+.+|+.+++.++||||+++++++.....
T Consensus 22 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 22 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred cCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 3478999999999999999999984 7789999998766666677889999999999999999999999987654
Q ss_pred --eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 577 --LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 577 --~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
+|+||||+. ++|.+++. ..+++..++.++.||+.||.|||++| |+||||||+||||+.++.+||+|||+++.
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~al~~LH~~~--ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMG---LKFSEEKIQYLVYQMLKGLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTT---SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eeEEEEecccc-CCHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999996 58887774 34899999999999999999999999 99999999999999999999999999976
Q ss_pred cccccccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccc------------
Q 003978 655 KHETYLTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN------------ 721 (782)
Q Consensus 655 ~~~~~~~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~------------ 721 (782)
.... .....||+.|+|||++.+ ..++.++|||||||++|+|++|..||...+....+..+....
T Consensus 176 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 252 (353)
T 3coi_A 176 ADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN 252 (353)
T ss_dssp -----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCS
T ss_pred CCCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHh
Confidence 5432 234578999999999987 678999999999999999999999999887665544432110
Q ss_pred -----------------cccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 722 -----------------QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 722 -----------------~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
....++..+++++.+||.+||..||.+|||+.++ +.|+||+..+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~------l~hp~f~~~~~ 314 (353)
T 3coi_A 253 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQA------LTHPFFEPFRD 314 (353)
T ss_dssp CHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHH------HTSGGGTTTCC
T ss_pred hHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHH------hcCcchhhccC
Confidence 0112335679999999999999999999999999 67899986554
No 227
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.8e-40 Score=359.30 Aligned_cols=250 Identities=28% Similarity=0.442 Sum_probs=200.3
Q ss_pred cccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCC------HHHHHHHHHHHHHHHhCCCCceeEEeeeeecC
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYS------DEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSP 574 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~------~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~ 574 (782)
..++|++.+.||+|+||.||+|.+. ++.||||++...... ......+.+|+.+|+.++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 4578999999999999999999984 568999999764321 12334678899999999999999999998765
Q ss_pred CceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc---EEEEecCC
Q 003978 575 QRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT---VKVGDFGL 651 (782)
Q Consensus 575 ~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~---vkL~DFGl 651 (782)
. +|+||||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+.++. +||+|||+
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTT-CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred c-eEEEEecCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 4 89999999999999999754 46899999999999999999999999 999999999999987654 99999999
Q ss_pred CcccccccccccCCCCCCcccCccccc---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHhhcc--ccccC
Q 003978 652 SRLKHETYLTTKTGKGTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAVGFM--NQRLE 725 (782)
Q Consensus 652 a~~~~~~~~~~~~~~Gt~~y~aPE~l~---~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~-~~~~~i~~~--~~~~~ 725 (782)
+........ .....||+.|+|||++. +..++.++|||||||++|+|++|..||...... .....+... .....
T Consensus 164 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 242 (322)
T 2ycf_A 164 SKILGETSL-MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 242 (322)
T ss_dssp CEECCCCHH-HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHH
T ss_pred ceecccccc-cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCch
Confidence 986544321 12346899999999974 566789999999999999999999999765432 122222111 11122
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003978 726 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVD 757 (782)
Q Consensus 726 ~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~ 757 (782)
.+..++.++.+||.+||..||.+||++.++++
T Consensus 243 ~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 243 VWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 33568999999999999999999999999953
No 228
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=8.2e-40 Score=351.85 Aligned_cols=259 Identities=22% Similarity=0.343 Sum_probs=207.4
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeee-------
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT------- 572 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~------- 572 (782)
...++|++++.||+|+||.||+|.+. ++.||||++... .....+.+.+|+++++.++||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 85 (320)
T 2i6l_A 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLT 85 (320)
T ss_dssp EETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCC
T ss_pred ccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccc
Confidence 34578999999999999999999985 678999998754 3556678899999999999999999998873
Q ss_pred -------cCCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc-CCCcE
Q 003978 573 -------SPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD-KHWTV 644 (782)
Q Consensus 573 -------~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~-~~~~v 644 (782)
....+|+||||+. ++|.+++.. ..+++..++.++.||+.||+|||+++ |+|+||||+|||++ .++.+
T Consensus 86 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~ 160 (320)
T 2i6l_A 86 DDVGSLTELNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPANLFINTEDLVL 160 (320)
T ss_dssp C----CCSCSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEEETTTTEE
T ss_pred cccccccccCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCCCCeE
Confidence 3467899999996 599999975 45889999999999999999999999 99999999999997 56799
Q ss_pred EEEecCCCccccccc---ccccCCCCCCcccCcccccC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc
Q 003978 645 KVGDFGLSRLKHETY---LTTKTGKGTPQWMAPEVLRN-EPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM 720 (782)
Q Consensus 645 kL~DFGla~~~~~~~---~~~~~~~Gt~~y~aPE~l~~-~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~ 720 (782)
||+|||+++...... .......+|+.|+|||++.+ ..++.++|||||||++|+|++|..||...+.......+...
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 240 (320)
T 2i6l_A 161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILES 240 (320)
T ss_dssp EECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred EEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 999999998654321 11223457999999998865 67899999999999999999999999988776655443211
Q ss_pred cc----------------------------ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccC
Q 003978 721 NQ----------------------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 721 ~~----------------------------~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~ 772 (782)
.. ....++.++.++.+||.+||..||.+|||+.++ +.|+||+...-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el------l~hp~~~~~~~ 314 (320)
T 2i6l_A 241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEA------LSHPYMSIYSF 314 (320)
T ss_dssp SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHH------HTSHHHHTTCC
T ss_pred cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHH------hCCcccccccC
Confidence 10 011235689999999999999999999999999 67899987654
Q ss_pred c
Q 003978 773 T 773 (782)
Q Consensus 773 ~ 773 (782)
.
T Consensus 315 p 315 (320)
T 2i6l_A 315 P 315 (320)
T ss_dssp -
T ss_pred c
Confidence 4
No 229
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.5e-39 Score=385.87 Aligned_cols=263 Identities=33% Similarity=0.590 Sum_probs=224.9
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEcC-----CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeee
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWYG-----SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT 572 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~~-----~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~ 572 (782)
..+++..++|++++.||+|+||.||+|.+.. ..||||+++.. ......+.+.+|+.+++.++|||||++++++.
T Consensus 383 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~ 461 (656)
T 2j0j_A 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT 461 (656)
T ss_dssp GGTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST-TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence 3566777899999999999999999998842 34889987643 24556678999999999999999999999985
Q ss_pred cCCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCC
Q 003978 573 SPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLS 652 (782)
Q Consensus 573 ~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla 652 (782)
++.+|+|||||++++|.+++......+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||++
T Consensus 462 -~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDikp~NILl~~~~~vkL~DFG~a 538 (656)
T 2j0j_A 462 -ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLS 538 (656)
T ss_dssp -SSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCCCCC
T ss_pred -cCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccchHhEEEeCCCCEEEEecCCC
Confidence 46789999999999999999877667999999999999999999999998 999999999999999999999999999
Q ss_pred ccccccc-ccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccccCCCCCC
Q 003978 653 RLKHETY-LTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDV 730 (782)
Q Consensus 653 ~~~~~~~-~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~ 730 (782)
+...... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||...........+.. .....++..+
T Consensus 539 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~-~~~~~~~~~~ 617 (656)
T 2j0j_A 539 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN-GERLPMPPNC 617 (656)
T ss_dssp CSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHH-TCCCCCCTTC
T ss_pred eecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc-CCCCCCCccc
Confidence 8654432 22234467889999999999999999999999999999997 9999999888777666643 3355678889
Q ss_pred CHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003978 731 DPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 765 (782)
Q Consensus 731 ~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~ 765 (782)
++.+.+||.+||..||.+|||+.++++.|.++..+
T Consensus 618 ~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 618 PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998654
No 230
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=8.8e-40 Score=358.75 Aligned_cols=263 Identities=21% Similarity=0.234 Sum_probs=201.3
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc--
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR-- 576 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~-- 576 (782)
....++|++.+.||+|+||.||+|.+. +..||||++....... ....++++.+..++||||+++++++.....
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR---NRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCC---CHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcccc---HHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 345679999999999999999999984 7789999986543322 345567888888999999999999865433
Q ss_pred -----eeEEEeecCCCCHHHHHh---hcCCcchHHHHHHHHHHHHHHHHhhh--cCCCCeeecCCCCCcEEEcC-CCcEE
Q 003978 577 -----LCIVTEFLPRGSLFRLLQ---RNTTKLDWRRRILMALDIARGVSYLH--HCNPPIIHRDLKSSNLLVDK-HWTVK 645 (782)
Q Consensus 577 -----~~lv~E~~~ggsL~~~l~---~~~~~l~~~~~~~i~~qll~aL~~LH--~~~~~ivHrDIKp~NILl~~-~~~vk 645 (782)
+++||||+++ +|...+. .....+++..++.++.||+.||.||| +++ |+||||||+||||+. ++.+|
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~--ivH~Dlkp~NIll~~~~~~~k 172 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN--VCHRDIKPHNVLVNEADGTLK 172 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC--CBCSCCCGGGEEEETTTTEEE
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC--eecCcCCHHHEEEeCCCCcEE
Confidence 7899999976 6655543 23456889999999999999999999 877 999999999999996 89999
Q ss_pred EEecCCCcccccccccccCCCCCCcccCcccccCCC-CCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccc--
Q 003978 646 VGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEP-SDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ-- 722 (782)
Q Consensus 646 L~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~-~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~-- 722 (782)
|+|||+++...... ......||+.|+|||++.+.. ++.++|||||||++|+|++|..||...+.......+.....
T Consensus 173 l~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~ 251 (360)
T 3e3p_A 173 LCDFGSAKKLSPSE-PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCP 251 (360)
T ss_dssp ECCCTTCBCCCTTS-CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred EeeCCCceecCCCC-CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCC
Confidence 99999998655432 233557899999999997654 79999999999999999999999998887665555422110
Q ss_pred ----------------------------ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcC
Q 003978 723 ----------------------------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTV 774 (782)
Q Consensus 723 ----------------------------~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~ 774 (782)
....+...++++.+||.+||..||.+|||+.++ |+|+||+......
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~------l~hp~f~~~~~~~ 325 (360)
T 3e3p_A 252 SREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEA------LCHPYFDELHDPA 325 (360)
T ss_dssp CHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHH------TTSGGGGGGGCTT
T ss_pred CHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHH------hcCccccccCCcc
Confidence 011223367899999999999999999999999 6799998876554
Q ss_pred CC
Q 003978 775 GD 776 (782)
Q Consensus 775 ~~ 776 (782)
..
T Consensus 326 ~~ 327 (360)
T 3e3p_A 326 TK 327 (360)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 231
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=7.9e-40 Score=348.86 Aligned_cols=253 Identities=26% Similarity=0.401 Sum_probs=203.5
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec--------
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS-------- 573 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-------- 573 (782)
.++|++++.||+|+||.||+|.+ .++.||||++... ......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT---EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM 81 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC--
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc---HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhh
Confidence 36899999999999999999997 5778999998643 3456788899999999999999999998754
Q ss_pred -----CCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEe
Q 003978 574 -----PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGD 648 (782)
Q Consensus 574 -----~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~D 648 (782)
...+|+||||+++++|.+++......+++..++.++.||+.||.|||+++ |+|+||||+||||+.++.+||+|
T Consensus 82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 82 TAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQG--IIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ----CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECC
T ss_pred cccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCC--eecccCCHHhEEEcCCCCEEEee
Confidence 35689999999999999999877767889999999999999999999999 99999999999999999999999
Q ss_pred cCCCcccccc--------------cccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCC-hHH
Q 003978 649 FGLSRLKHET--------------YLTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLN-SMQ 712 (782)
Q Consensus 649 FGla~~~~~~--------------~~~~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~-~~~ 712 (782)
||++...... ........||+.|+|||++.+. .++.++|||||||++|+|++ ||.... ...
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~ 236 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVN 236 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHH
Confidence 9999765422 1122345689999999999865 68899999999999999998 564322 222
Q ss_pred HHHHhhccc--cccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 003978 713 VIGAVGFMN--QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQAS 770 (782)
Q Consensus 713 ~~~~i~~~~--~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~ 770 (782)
....+.... ....++...++.+.+||.+||..||.+|||+.++ +.|+||+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l------l~h~~~~~~ 290 (303)
T 1zy4_A 237 ILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTL------LNSGWLPVK 290 (303)
T ss_dssp HHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHH------HHSSCSCCC
T ss_pred HHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHH------hCCCCcCCC
Confidence 333332211 1233455678889999999999999999999999 568888643
No 232
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.4e-40 Score=369.63 Aligned_cols=260 Identities=19% Similarity=0.363 Sum_probs=210.1
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC--ce
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQ--RL 577 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~--~~ 577 (782)
...++|++.++||+|+||.||+|.+. ++.||||++...... .....+.+|+++|+.++||||+++++++.... ..
T Consensus 6 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 84 (396)
T 4eut_A 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK 84 (396)
T ss_dssp CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG-SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred CCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCee
Confidence 34578999999999999999999985 778999999754321 22456778999999999999999999987655 68
Q ss_pred eEEEeecCCCCHHHHHhhcCC--cchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE----cCCCcEEEEecCC
Q 003978 578 CIVTEFLPRGSLFRLLQRNTT--KLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV----DKHWTVKVGDFGL 651 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~--~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl----~~~~~vkL~DFGl 651 (782)
|+|||||++++|.+++..... .+++..++.++.||+.||+|||+++ |+||||||+|||| +.++.+||+|||+
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp EEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred EEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC--EEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 999999999999999976432 3899999999999999999999999 9999999999999 7778899999999
Q ss_pred CcccccccccccCCCCCCcccCcccccC--------CCCCchhHHHHHHHHHHHHHcCCCCCCCCC----hHHHHHHhhc
Q 003978 652 SRLKHETYLTTKTGKGTPQWMAPEVLRN--------EPSDEKSDVYSFGVILWELATEKIPWDNLN----SMQVIGAVGF 719 (782)
Q Consensus 652 a~~~~~~~~~~~~~~Gt~~y~aPE~l~~--------~~~s~~sDIwSLG~ll~elltG~~Pf~~~~----~~~~~~~i~~ 719 (782)
++...... ......||+.|+|||++.+ ..++.++|||||||++|+|++|..||.... ....+..+..
T Consensus 163 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 241 (396)
T 4eut_A 163 ARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (396)
T ss_dssp CEECCCGG-GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred ceEccCCC-ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence 98655433 2334579999999999875 456789999999999999999999996432 2233333321
Q ss_pred ccc-------------------cc----CCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003978 720 MNQ-------------------RL----EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 765 (782)
Q Consensus 720 ~~~-------------------~~----~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~ 765 (782)
... .. .++..++..+.+||.+||..||++||++.++++.+.++.+.
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 110 00 11123456789999999999999999999999999887653
No 233
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=7.2e-40 Score=355.12 Aligned_cols=262 Identities=26% Similarity=0.415 Sum_probs=191.3
Q ss_pred ccccccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHH-HHHhCCCCceeEEeeeeecC
Q 003978 498 LDYEILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVS-LMKRLRHPNVLLFMGAVTSP 574 (782)
Q Consensus 498 ~~~e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~-il~~l~HpnIv~l~~~~~~~ 574 (782)
..++...++|++++.||+|+||.||+|.+. ++.||||++..... ......+..|+. +++.++||||+++++++..+
T Consensus 15 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~ 93 (327)
T 3aln_A 15 QHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD-EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFRE 93 (327)
T ss_dssp EEECCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC-HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECS
T ss_pred HhcccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC-chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeC
Confidence 455667789999999999999999999985 77899999976543 333445555655 77778999999999999999
Q ss_pred CceeEEEeecCCCCHHHHHhh----cCCcchHHHHHHHHHHHHHHHHhhhcC-CCCeeecCCCCCcEEEcCCCcEEEEec
Q 003978 575 QRLCIVTEFLPRGSLFRLLQR----NTTKLDWRRRILMALDIARGVSYLHHC-NPPIIHRDLKSSNLLVDKHWTVKVGDF 649 (782)
Q Consensus 575 ~~~~lv~E~~~ggsL~~~l~~----~~~~l~~~~~~~i~~qll~aL~~LH~~-~~~ivHrDIKp~NILl~~~~~vkL~DF 649 (782)
+..|+||||+.+ +|.+++.. ....+++..++.++.|++.||.|||+. + |+||||||+||||+.++.+||+||
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~--ivH~dlkp~NIll~~~~~~kl~Df 170 (327)
T 3aln_A 94 GDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDF 170 (327)
T ss_dssp SEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS--CCCSCCCGGGEEEETTTEEEECCC
T ss_pred CceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC--EeECCCCHHHEEEcCCCCEEEccC
Confidence 999999999965 88887753 245689999999999999999999998 8 999999999999999999999999
Q ss_pred CCCcccccccccccCCCCCCcccCcccc----cCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHH-HHHHhhcccccc
Q 003978 650 GLSRLKHETYLTTKTGKGTPQWMAPEVL----RNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQ-VIGAVGFMNQRL 724 (782)
Q Consensus 650 Gla~~~~~~~~~~~~~~Gt~~y~aPE~l----~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~-~~~~i~~~~~~~ 724 (782)
|+++....... .....||+.|+|||++ .+..++.++|||||||++|+|++|..||....... ....+. .....
T Consensus 171 g~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~ 248 (327)
T 3aln_A 171 GISGQLVDSIA-KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVV-KGDPP 248 (327)
T ss_dssp SSSCC-------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCC-CSCCC
T ss_pred CCceecccccc-cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHh-cCCCC
Confidence 99976544322 2234789999999998 46668899999999999999999999998754321 111111 11122
Q ss_pred CC----CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 725 EI----PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 725 ~~----p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
.+ ...+++.+.+||.+||..||.+|||+.++ ++|+||+...
T Consensus 249 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el------l~hp~~~~~~ 293 (327)
T 3aln_A 249 QLSNSEEREFSPSFINFVNLCLTKDESKRPKYKEL------LKHPFILMYE 293 (327)
T ss_dssp CCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHH------TTSHHHHHHH
T ss_pred CCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHH------HhChHHHHhH
Confidence 22 24689999999999999999999999999 5677875443
No 234
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.3e-39 Score=361.72 Aligned_cols=258 Identities=24% Similarity=0.314 Sum_probs=209.6
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CC-----ceeEEeeeee
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HP-----NVLLFMGAVT 572 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-Hp-----nIv~l~~~~~ 572 (782)
+...++|++.++||+|+||.||+|.+. ++.||||+++.. ......+..|+.+++.+. |+ +|+++++++.
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~ 126 (382)
T 2vx3_A 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK---KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 126 (382)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE
T ss_pred CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc---HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec
Confidence 445689999999999999999999884 667999999643 344567778899988885 44 4999999999
Q ss_pred cCCceeEEEeecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc--CCCcEEEEec
Q 003978 573 SPQRLCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD--KHWTVKVGDF 649 (782)
Q Consensus 573 ~~~~~~lv~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~--~~~~vkL~DF 649 (782)
..+.+|+||||+. ++|.+++.... ..+++..++.++.||+.||.|||.+..+||||||||+||||+ .++.+||+||
T Consensus 127 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DF 205 (382)
T 2vx3_A 127 FRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDF 205 (382)
T ss_dssp ETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCC
T ss_pred cCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEec
Confidence 9999999999995 59999997653 458999999999999999999995333399999999999995 4778999999
Q ss_pred CCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcccccc-----
Q 003978 650 GLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL----- 724 (782)
Q Consensus 650 Gla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~----- 724 (782)
|+++..... .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+....+..+......+
T Consensus 206 G~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 282 (382)
T 2vx3_A 206 GSSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHIL 282 (382)
T ss_dssp TTCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred cCceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 999866443 234578999999999999999999999999999999999999999888766655443211100
Q ss_pred -----------CCC------------------CC----------------------------CCHHHHHHHHHhhhhCCC
Q 003978 725 -----------EIP------------------KD----------------------------VDPRWAAIVESCWHSDPQ 747 (782)
Q Consensus 725 -----------~~p------------------~~----------------------------~~~~l~~LI~~cL~~dP~ 747 (782)
.++ +. .++++.+||.+||..||.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~ 362 (382)
T 2vx3_A 283 DQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPK 362 (382)
T ss_dssp TTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTT
T ss_pred HhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChh
Confidence 000 00 014789999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhhccc
Q 003978 748 CRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 748 ~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
+|||+.++ |+|+||+...
T Consensus 363 ~Rpta~e~------L~hp~f~~~~ 380 (382)
T 2vx3_A 363 TRIQPYYA------LQHSFFKKTA 380 (382)
T ss_dssp TSCCHHHH------TTSGGGCC--
T ss_pred hCCCHHHH------hcCcccccCC
Confidence 99999999 6789998654
No 235
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.9e-40 Score=368.80 Aligned_cols=259 Identities=22% Similarity=0.327 Sum_probs=192.9
Q ss_pred cccceeE-eeeeccCCcEEEEEEEEc----CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeee--cCC
Q 003978 503 LWEDLTI-GEQIGQGSCGTVYHAVWY----GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVT--SPQ 575 (782)
Q Consensus 503 ~~~~y~i-~~~IG~G~~G~Vy~~~~~----~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~--~~~ 575 (782)
..+.|++ +++||+|+||.||+|.+. +..||||++...... ..+.+|+.+|+.++|||||++++++. ...
T Consensus 18 ~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 93 (405)
T 3rgf_A 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS----MSACREIALLRELKHPNVISLQKVFLSHADR 93 (405)
T ss_dssp HHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC----HHHHHHHHHHHHCCCTTBCCCCEEEEETTTT
T ss_pred hhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC----HHHHHHHHHHHhcCCCCeeeEeeEEecCCCC
Confidence 3456776 568999999999999974 567999999765543 35678999999999999999999994 467
Q ss_pred ceeEEEeecCCCCHHHHHhhc--------CCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE----cCCCc
Q 003978 576 RLCIVTEFLPRGSLFRLLQRN--------TTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV----DKHWT 643 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~--------~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl----~~~~~ 643 (782)
.+|+||||+. ++|.+++... ...+++..++.++.||+.||.|||+++ |+||||||+|||| +.++.
T Consensus 94 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 94 KVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECCSSTTTTC
T ss_pred eEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC--EeCCCcCHHHeEEecCCCCCCc
Confidence 8999999995 5888888532 124899999999999999999999999 9999999999999 67789
Q ss_pred EEEEecCCCccccccc---ccccCCCCCCcccCcccccCC-CCCchhHHHHHHHHHHHHHcCCCCCCCCChH--------
Q 003978 644 VKVGDFGLSRLKHETY---LTTKTGKGTPQWMAPEVLRNE-PSDEKSDVYSFGVILWELATEKIPWDNLNSM-------- 711 (782)
Q Consensus 644 vkL~DFGla~~~~~~~---~~~~~~~Gt~~y~aPE~l~~~-~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~-------- 711 (782)
+||+|||+++...... ......+||+.|+|||++.+. .++.++|||||||++|+|++|..||......
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~ 250 (405)
T 3rgf_A 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYH 250 (405)
T ss_dssp EEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCC
T ss_pred EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccch
Confidence 9999999998654321 223345799999999999874 4899999999999999999999999755431
Q ss_pred -HHHHHhhcccccc------------------------------------CCCCCCCHHHHHHHHHhhhhCCCCCCCHHH
Q 003978 712 -QVIGAVGFMNQRL------------------------------------EIPKDVDPRWAAIVESCWHSDPQCRPSFQE 754 (782)
Q Consensus 712 -~~~~~i~~~~~~~------------------------------------~~p~~~~~~l~~LI~~cL~~dP~~RPs~~e 754 (782)
..+..+......+ ......++.+.+||.+||..||.+|||+.+
T Consensus 251 ~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e 330 (405)
T 3rgf_A 251 HDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQ 330 (405)
T ss_dssp HHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHH
T ss_pred HHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence 1111111000000 011123778999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCcC
Q 003978 755 LVDKLRDLQRQYFQASRSTV 774 (782)
Q Consensus 755 ll~~L~~L~~~~~~~~~~~~ 774 (782)
+ |+|+||+..+...
T Consensus 331 ~------L~hp~f~~~~~~~ 344 (405)
T 3rgf_A 331 A------MQDPYFLEDPLPT 344 (405)
T ss_dssp H------HTSGGGTSSSCCC
T ss_pred H------hcChhhccCCCCc
Confidence 9 7789998765443
No 236
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.9e-39 Score=371.21 Aligned_cols=256 Identities=20% Similarity=0.302 Sum_probs=213.3
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCC-CceeEEeeeeecCCcee
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRH-PNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~H-pnIv~l~~~~~~~~~~~ 578 (782)
...++|+++++||+|+||.||+|.+. ++.||||++....... .+.+|+++++.+.| ++|+.+..++......|
T Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~----~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~ 79 (483)
T 3sv0_A 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP----QLLYESKIYRILQGGTGIPNVRWFGVEGDYNV 79 (483)
T ss_dssp EETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSC----CHHHHHHHHHHTTTSTTCCCEEEEEEETTEEE
T ss_pred CcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccH----HHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEE
Confidence 34578999999999999999999974 7789999987654332 46779999999986 55666666677778889
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE---cCCCcEEEEecCCCccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV---DKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl---~~~~~vkL~DFGla~~~ 655 (782)
|||||| +++|.+++......+++..++.++.||+.||.|||+++ ||||||||+|||| +.++.+||+|||+++..
T Consensus 80 lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g--IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS--FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156 (483)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred EEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence 999999 89999999876778999999999999999999999999 9999999999999 58899999999999865
Q ss_pred ccccc-------cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh---HHHHHHhhcc---cc
Q 003978 656 HETYL-------TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS---MQVIGAVGFM---NQ 722 (782)
Q Consensus 656 ~~~~~-------~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~---~~~~~~i~~~---~~ 722 (782)
..... ......||+.|+|||++.+..++.++|||||||+||+|++|..||..... ...+..+... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (483)
T 3sv0_A 157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATS 236 (483)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSC
T ss_pred cCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcccccc
Confidence 44321 22356799999999999999999999999999999999999999987543 2222222111 11
Q ss_pred ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 723 RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 723 ~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
...++..++.++.+||.+||..||++||++.+|++.|+++..
T Consensus 237 ~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 237 IEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp HHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 223346789999999999999999999999999999998865
No 237
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=8.6e-42 Score=364.77 Aligned_cols=252 Identities=33% Similarity=0.559 Sum_probs=190.0
Q ss_pred ccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHh--CCCCceeEEeeeeecCC----ce
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKR--LRHPNVLLFMGAVTSPQ----RL 577 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~--l~HpnIv~l~~~~~~~~----~~ 577 (782)
.++|++.+.||+|+||.||+|.+.++.||||++.... ...+.+|.+++.. ++||||+++++++.... .+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 76 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CTTSCEEEEECC-TT-----HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEcCcceEEEEecccc-----hhhHHHHHHHHHHHhccCcceeeeeeecccCCCcccee
Confidence 3689999999999999999999999999999986432 2456678888887 78999999999998776 78
Q ss_pred eEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhh--------cCCCCeeecCCCCCcEEEcCCCcEEEEec
Q 003978 578 CIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLH--------HCNPPIIHRDLKSSNLLVDKHWTVKVGDF 649 (782)
Q Consensus 578 ~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH--------~~~~~ivHrDIKp~NILl~~~~~vkL~DF 649 (782)
|+|||||++++|.+++... .+++..++.++.|++.||.||| +++ |+||||||+||||+.++.+||+||
T Consensus 77 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dlkp~Nil~~~~~~~kl~DF 152 (303)
T 3gxj_A 77 WLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA--IAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC---CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred EEEEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC--EeeCcCCHHHeEECCCCCEEEeec
Confidence 9999999999999999754 5788889999999999999999 888 999999999999999999999999
Q ss_pred CCCccccccccc----ccCCCCCCcccCcccccCC------CCCchhHHHHHHHHHHHHHcC----------CCCCCCCC
Q 003978 650 GLSRLKHETYLT----TKTGKGTPQWMAPEVLRNE------PSDEKSDVYSFGVILWELATE----------KIPWDNLN 709 (782)
Q Consensus 650 Gla~~~~~~~~~----~~~~~Gt~~y~aPE~l~~~------~~s~~sDIwSLG~ll~elltG----------~~Pf~~~~ 709 (782)
|+++........ .....||+.|+|||++.+. .++.++|||||||++|+|++| ..||....
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~ 232 (303)
T 3gxj_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp CC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTC
T ss_pred CcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccC
Confidence 999765443222 2234799999999999876 334689999999999999999 77885542
Q ss_pred h-----HHHHHHhhccccccCCCC-----CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHH
Q 003978 710 S-----MQVIGAVGFMNQRLEIPK-----DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 764 (782)
Q Consensus 710 ~-----~~~~~~i~~~~~~~~~p~-----~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~ 764 (782)
. ......+......+.++. .+++.+.+||.+||..||.+|||+.++++.|+++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 233 PSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp C-CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred CCCccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 2 112222221222233332 233579999999999999999999999999987754
No 238
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.4e-39 Score=353.37 Aligned_cols=256 Identities=23% Similarity=0.344 Sum_probs=210.9
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEc--C-CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCc------eeEEeeee
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWY--G-SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPN------VLLFMGAV 571 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~--~-~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~Hpn------Iv~l~~~~ 571 (782)
+...++|++++.||+|+||.||+|.+. + ..||||+++.. ......+.+|+.+++.+.|++ |+.+++++
T Consensus 15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~ 91 (355)
T 2eu9_A 15 DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV---GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWF 91 (355)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEE
T ss_pred ceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc---ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeee
Confidence 345689999999999999999999974 3 57999998643 344567888999999987655 99999999
Q ss_pred ecCCceeEEEeecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE------------
Q 003978 572 TSPQRLCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLV------------ 638 (782)
Q Consensus 572 ~~~~~~~lv~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl------------ 638 (782)
...+.+|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||+||||
T Consensus 92 ~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~--ivH~Dlkp~NIll~~~~~~~~~~~~ 168 (355)
T 2eu9_A 92 NFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ--LTHTDLKPENILFVNSEFETLYNEH 168 (355)
T ss_dssp EETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEESCCCEEEEECCC
T ss_pred eeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEeccccccccccc
Confidence 9999999999999 667777776543 56899999999999999999999998 9999999999999
Q ss_pred -------cCCCcEEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChH
Q 003978 639 -------DKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSM 711 (782)
Q Consensus 639 -------~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~ 711 (782)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus 169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 245 (355)
T 2eu9_A 169 KSCEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR 245 (355)
T ss_dssp -CCCEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred ccccccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH
Confidence 56789999999999764433 23457999999999999999999999999999999999999999988766
Q ss_pred HHHHHhhcccccc------------------------------------------CCCCCCCHHHHHHHHHhhhhCCCCC
Q 003978 712 QVIGAVGFMNQRL------------------------------------------EIPKDVDPRWAAIVESCWHSDPQCR 749 (782)
Q Consensus 712 ~~~~~i~~~~~~~------------------------------------------~~p~~~~~~l~~LI~~cL~~dP~~R 749 (782)
.....+....... ......++++.+||.+||..||.+|
T Consensus 246 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 325 (355)
T 2eu9_A 246 EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQR 325 (355)
T ss_dssp HHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhC
Confidence 5444332211100 0111224589999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhhccc
Q 003978 750 PSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 750 Ps~~ell~~L~~L~~~~~~~~~ 771 (782)
||+.++ |.|+||+...
T Consensus 326 pt~~e~------l~hp~f~~~~ 341 (355)
T 2eu9_A 326 ITLAEA------LLHPFFAGLT 341 (355)
T ss_dssp CCHHHH------TTSGGGGGCC
T ss_pred cCHHHH------hcChhhcCCC
Confidence 999999 6789998654
No 239
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.5e-40 Score=352.38 Aligned_cols=257 Identities=25% Similarity=0.445 Sum_probs=203.5
Q ss_pred cccccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCH----HHHHHHHHHHHHHHhC----CCCceeEEe
Q 003978 499 DYEILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSD----EVIHSFRQEVSLMKRL----RHPNVLLFM 568 (782)
Q Consensus 499 ~~e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~----~~~~~~~~Ei~il~~l----~HpnIv~l~ 568 (782)
..+...++|++++.||+|+||.||+|.+ .++.||||++....... .....+.+|+.+++.+ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 3455668999999999999999999987 56789999997654322 1233456799999998 899999999
Q ss_pred eeeecCCceeEEEee-cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc-CCCcEEE
Q 003978 569 GAVTSPQRLCIVTEF-LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD-KHWTVKV 646 (782)
Q Consensus 569 ~~~~~~~~~~lv~E~-~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~-~~~~vkL 646 (782)
+++...+..++|||| +.+++|.+++.... .+++..++.++.||+.||.|||+++ |+|+||||+||+++ .++.+||
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCHSRG--VVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHHT--EECCCCSGGGEEEETTTTEEEE
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChhhEEEeCCCCeEEE
Confidence 999999999999999 78899999997643 6899999999999999999999999 99999999999999 8899999
Q ss_pred EecCCCcccccccccccCCCCCCcccCcccccCCCCC-chhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccC
Q 003978 647 GDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSD-EKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLE 725 (782)
Q Consensus 647 ~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s-~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~ 725 (782)
+|||++....... .....||+.|+|||++.+..+. .++|||||||++|+|++|..||..... . ......
T Consensus 182 ~dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~------~~~~~~ 251 (312)
T 2iwi_A 182 IDFGSGALLHDEP--YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE--I------LEAELH 251 (312)
T ss_dssp CCCSSCEECCSSC--BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--H------HHTCCC
T ss_pred EEcchhhhcccCc--ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH--H------hhhccC
Confidence 9999998665432 2345789999999999876664 589999999999999999999975321 1 123455
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCcC
Q 003978 726 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTV 774 (782)
Q Consensus 726 ~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~~ 774 (782)
++..++.++.+||.+||..||++|||+.++ ++|+||+......
T Consensus 252 ~~~~~~~~~~~li~~~l~~~p~~Rps~~e~------l~~~~~~~~~~~~ 294 (312)
T 2iwi_A 252 FPAHVSPDCCALIRRCLAPKPSSRPSLEEI------LLDPWMQTPAEDV 294 (312)
T ss_dssp CCTTSCHHHHHHHHHHTCSSTTTSCCHHHH------HHSTTTCC-----
T ss_pred CcccCCHHHHHHHHHHccCChhhCcCHHHH------hcChhhcCchhcc
Confidence 678899999999999999999999999999 6789998765443
No 240
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.1e-39 Score=353.86 Aligned_cols=253 Identities=22% Similarity=0.347 Sum_probs=181.9
Q ss_pred cccceeEee-eeccCCcEEEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec----CC
Q 003978 503 LWEDLTIGE-QIGQGSCGTVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS----PQ 575 (782)
Q Consensus 503 ~~~~y~i~~-~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~----~~ 575 (782)
..++|.+.+ .||+|+||.||+|.+. ++.||||++.... . ........++.+.||||+++++++.. ..
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~---~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 99 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP---K---ARQEVDHHWQASGGPHIVCILDVYENMHHGKR 99 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH---H---HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH---H---HHHHHHHHHHhcCCCChHHHHHHHhhccCCCc
Confidence 446899865 6999999999999985 7889999986532 1 12223344667799999999999875 44
Q ss_pred ceeEEEeecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC---CCcEEEEecCC
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK---HWTVKVGDFGL 651 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~---~~~vkL~DFGl 651 (782)
.+|+|||||++++|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||+||||+. ++.+||+|||+
T Consensus 100 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~--ivH~dlkp~NIll~~~~~~~~~kl~Dfg~ 177 (336)
T 3fhr_A 100 CLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN--IAHRDVKPENLLYTSKEKDAVLKLTDFGF 177 (336)
T ss_dssp EEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred eEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEEecCCCceEEEecccc
Confidence 5899999999999999997653 46999999999999999999999999 999999999999976 45599999999
Q ss_pred CcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH----hhccc--cccC
Q 003978 652 SRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGA----VGFMN--QRLE 725 (782)
Q Consensus 652 a~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~----i~~~~--~~~~ 725 (782)
++..... ......||+.|+|||++.+..++.++|||||||++|+|++|..||........... +.... ....
T Consensus 178 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (336)
T 3fhr_A 178 AKETTQN--ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNP 255 (336)
T ss_dssp CEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTT
T ss_pred ceecccc--ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCch
Confidence 9765433 22345789999999999888889999999999999999999999976654432211 11111 1122
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 726 IPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 726 ~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
....+++++.+||.+||..||.+|||+.++ +.|+||+...
T Consensus 256 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~el------l~hp~~~~~~ 295 (336)
T 3fhr_A 256 EWSEVSEDAKQLIRLLLKTDPTERLTITQF------MNHPWINQSM 295 (336)
T ss_dssp TSTTCCHHHHHHHHHHSCSSGGGSCCHHHH------HHSHHHHTGG
T ss_pred hhccCCHHHHHHHHHHCCCChhHCcCHHHH------hcCccccccc
Confidence 225689999999999999999999999999 6789998654
No 241
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.2e-39 Score=353.12 Aligned_cols=253 Identities=23% Similarity=0.412 Sum_probs=212.3
Q ss_pred ccccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCH----HHHHHHHHHHHHHHhCC--CCceeEEeeee
Q 003978 500 YEILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSD----EVIHSFRQEVSLMKRLR--HPNVLLFMGAV 571 (782)
Q Consensus 500 ~e~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~----~~~~~~~~Ei~il~~l~--HpnIv~l~~~~ 571 (782)
.+...++|++++.||+|+||.||+|.+ .++.||||++....... .....+.+|+.+++.+. ||||+++++++
T Consensus 38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~ 117 (320)
T 3a99_A 38 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 117 (320)
T ss_dssp --CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE
T ss_pred cCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEE
Confidence 345668999999999999999999987 56789999997654321 11245667999999996 59999999999
Q ss_pred ecCCceeEEEeecCC-CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc-CCCcEEEEec
Q 003978 572 TSPQRLCIVTEFLPR-GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD-KHWTVKVGDF 649 (782)
Q Consensus 572 ~~~~~~~lv~E~~~g-gsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~-~~~~vkL~DF 649 (782)
..++.+++|||++.+ ++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+||||+ .++.+||+||
T Consensus 118 ~~~~~~~lv~e~~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 118 ERPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp ECSSEEEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEETTTTEEEECCC
T ss_pred ecCCcEEEEEEcCCCCccHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC--cEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 999999999999976 8999999764 46899999999999999999999999 99999999999999 7889999999
Q ss_pred CCCcccccccccccCCCCCCcccCcccccCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCC
Q 003978 650 GLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPK 728 (782)
Q Consensus 650 Gla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~-s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~ 728 (782)
|+++...... .....||+.|+|||++.+..+ +.++|||||||++|+|++|..||..... . ......++.
T Consensus 195 g~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~------~~~~~~~~~ 264 (320)
T 3a99_A 195 GSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--I------IRGQVFFRQ 264 (320)
T ss_dssp TTCEECCSSC--BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--H------HHCCCCCSS
T ss_pred cccccccccc--ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--h------hcccccccc
Confidence 9998665432 234578999999999987665 6789999999999999999999975321 1 122345667
Q ss_pred CCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 003978 729 DVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 771 (782)
Q Consensus 729 ~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~ 771 (782)
.+++++.+||.+||..||.+|||+.++ ++++||+...
T Consensus 265 ~~~~~~~~li~~~l~~dp~~Rps~~~l------l~hp~~~~~~ 301 (320)
T 3a99_A 265 RVSSECQHLIRWCLALRPSDRPTFEEI------QNHPWMQDVL 301 (320)
T ss_dssp CCCHHHHHHHHHHTCSSGGGSCCHHHH------HTSGGGSSCC
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHH------hcCHhhcCcc
Confidence 899999999999999999999999999 6788987654
No 242
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=3.1e-39 Score=355.90 Aligned_cols=256 Identities=19% Similarity=0.314 Sum_probs=205.6
Q ss_pred ccccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-----------CCceeEEe
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-----------HPNVLLFM 568 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-----------HpnIv~l~ 568 (782)
...++|++++.||+|+||.||+|.+ .++.||||++... ......+.+|+.+++.+. ||||++++
T Consensus 16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~ 92 (373)
T 1q8y_A 16 YKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLL 92 (373)
T ss_dssp ETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCC
T ss_pred ccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC---ccchhhhhHHHHHHHHhhcccccchhccccchHHHHH
Confidence 3457899999999999999999997 5778999998643 334567788999998886 89999999
Q ss_pred eeeecCC----ceeEEEeecCCCCHHHHHhhc-CCcchHHHHHHHHHHHHHHHHhhhcC-CCCeeecCCCCCcEEEc---
Q 003978 569 GAVTSPQ----RLCIVTEFLPRGSLFRLLQRN-TTKLDWRRRILMALDIARGVSYLHHC-NPPIIHRDLKSSNLLVD--- 639 (782)
Q Consensus 569 ~~~~~~~----~~~lv~E~~~ggsL~~~l~~~-~~~l~~~~~~~i~~qll~aL~~LH~~-~~~ivHrDIKp~NILl~--- 639 (782)
+++...+ .++++|||+ +++|.+++... ...+++..++.++.||+.||.|||++ + |+||||||+||||+
T Consensus 93 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~--ivH~Dikp~NIll~~~~ 169 (373)
T 1q8y_A 93 DHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVD 169 (373)
T ss_dssp EEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC--EECSCCSGGGEEEEEEE
T ss_pred HHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC--EEecCCChHHeEEeccC
Confidence 9987654 789999999 88999999763 34589999999999999999999997 8 99999999999994
Q ss_pred ---CCCcEEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh------
Q 003978 640 ---KHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNS------ 710 (782)
Q Consensus 640 ---~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~------ 710 (782)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|+|++|..||.....
T Consensus 170 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 246 (373)
T 1q8y_A 170 SPENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246 (373)
T ss_dssp TTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred CCcCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence 3448999999999765543 2345789999999999999999999999999999999999999986542
Q ss_pred HHHHHHhhc-c---------------------------------------ccccCCCCCCCHHHHHHHHHhhhhCCCCCC
Q 003978 711 MQVIGAVGF-M---------------------------------------NQRLEIPKDVDPRWAAIVESCWHSDPQCRP 750 (782)
Q Consensus 711 ~~~~~~i~~-~---------------------------------------~~~~~~p~~~~~~l~~LI~~cL~~dP~~RP 750 (782)
......+.. . .....++..++.++.+||.+||..||.+||
T Consensus 247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 326 (373)
T 1q8y_A 247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 326 (373)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence 111111110 0 001123344567899999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhhcccC
Q 003978 751 SFQELVDKLRDLQRQYFQASRS 772 (782)
Q Consensus 751 s~~ell~~L~~L~~~~~~~~~~ 772 (782)
|+.++ |.|+||+....
T Consensus 327 t~~el------l~hp~f~~~~~ 342 (373)
T 1q8y_A 327 DAGGL------VNHPWLKDTLG 342 (373)
T ss_dssp CHHHH------HTCGGGTTCTT
T ss_pred CHHHH------hhChhhhcccC
Confidence 99999 67899987543
No 243
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=366.42 Aligned_cols=253 Identities=25% Similarity=0.366 Sum_probs=197.0
Q ss_pred ccccceeEeeeeccCCcEE-EEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCceeE
Q 003978 502 ILWEDLTIGEQIGQGSCGT-VYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCI 579 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~-Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~l 579 (782)
+...+|.+.++||+|+||. ||++...++.||||++..... ..+.+|+++|+.+ +|||||++++++.....+|+
T Consensus 21 i~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~l 95 (432)
T 3p23_A 21 VGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYI 95 (432)
T ss_dssp ETTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEE
T ss_pred EccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEE
Confidence 4445799999999999998 555666889999999865432 2345799999999 79999999999999999999
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC-----CCcEEEEecCCCcc
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK-----HWTVKVGDFGLSRL 654 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~-----~~~vkL~DFGla~~ 654 (782)
|||||. ++|.+++......+.+..++.++.||+.||.|||+++ |+||||||+||||+. ...+||+|||+++.
T Consensus 96 v~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~ 172 (432)
T 3p23_A 96 AIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172 (432)
T ss_dssp EEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTT--CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred EEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCc--CEeCCCCHHHEEEecCCCCCceeEEEecccceee
Confidence 999995 5999999876656666677889999999999999999 999999999999953 23588999999976
Q ss_pred ccccc---ccccCCCCCCcccCccccc---CCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHhhccccc-cCC
Q 003978 655 KHETY---LTTKTGKGTPQWMAPEVLR---NEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQR-LEI 726 (782)
Q Consensus 655 ~~~~~---~~~~~~~Gt~~y~aPE~l~---~~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~~~~~~~i~~~~~~-~~~ 726 (782)
..... .......||+.|+|||++. +..++.++|||||||++|+|++ |..||...........+...... ...
T Consensus 173 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 252 (432)
T 3p23_A 173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHP 252 (432)
T ss_dssp C------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCT
T ss_pred ccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCc
Confidence 54321 2233457999999999998 4566789999999999999999 99999766554443332211111 112
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003978 727 PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 768 (782)
Q Consensus 727 p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~ 768 (782)
+...+..+.+||.+||..||.+|||+.+++ +|+||+
T Consensus 253 ~~~~~~~~~~li~~~L~~dP~~Rps~~evl------~hp~f~ 288 (432)
T 3p23_A 253 EKHEDVIARELIEKMIAMDPQKRPSAKHVL------KHPFFW 288 (432)
T ss_dssp TCHHHHHHHHHHHHHSCSSGGGSCCHHHHH------TSTTTC
T ss_pred cccccHHHHHHHHHHHhCCHhhCCCHHHHH------hCcccc
Confidence 233456789999999999999999999994 566664
No 244
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2.3e-37 Score=330.40 Aligned_cols=231 Identities=16% Similarity=0.137 Sum_probs=192.6
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCcee
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 578 (782)
...++|++.+.||+|+||.||+|.+. ++.||||++..... .......+.+|+.++..++||||+++++++...+.+|
T Consensus 28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 107 (286)
T 3uqc_A 28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGL 107 (286)
T ss_dssp ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEE
Confidence 45578999999999999999999985 77899999987654 3566788999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccc
Q 003978 579 IVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHET 658 (782)
Q Consensus 579 lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~ 658 (782)
+|||||+|++|.+++... .....+..++.||+.||.|||++| |+||||||+||||+.+|.+||+++|
T Consensus 108 lv~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH~~g--ivH~Dikp~NIll~~~g~~kl~~~~-------- 174 (286)
T 3uqc_A 108 VVAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAHRAG--VALSIDHPSRVRVSIDGDVVLAYPA-------- 174 (286)
T ss_dssp EEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEEETTSCEEECSCC--------
T ss_pred EEEEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHCC--CccCCCCcccEEEcCCCCEEEEecc--------
Confidence 999999999999999643 344567889999999999999999 9999999999999999999997443
Q ss_pred cccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH-hhcccc----ccCCCCCCCHH
Q 003978 659 YLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGA-VGFMNQ----RLEIPKDVDPR 733 (782)
Q Consensus 659 ~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~-i~~~~~----~~~~p~~~~~~ 733 (782)
|++ +++.++|||||||++|+|++|+.||...+....+.. ...... ...+...++++
T Consensus 175 ------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T 3uqc_A 175 ------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQ 235 (286)
T ss_dssp ------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHH
T ss_pred ------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHH
Confidence 333 368899999999999999999999987654321100 000111 11234678999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHH
Q 003978 734 WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 765 (782)
Q Consensus 734 l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~ 765 (782)
+.+||.+||..||.+| |+.++++.|.++...
T Consensus 236 l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 236 ISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp HHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred HHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 9999999999999999 999999999988643
No 245
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.8e-37 Score=350.76 Aligned_cols=250 Identities=25% Similarity=0.351 Sum_probs=189.3
Q ss_pred ccceeEeeeeccCCcEEEEEE-EEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCceeEEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHA-VWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~-~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
.+.|.+.+.||+|+||+||.+ ...++.||||++.... ...+.+|+.+|+.+ +|||||++++++.....+|+||
T Consensus 14 ~~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~-----~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~ 88 (434)
T 2rio_A 14 KNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF-----CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIAL 88 (434)
T ss_dssp SSCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred hheeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH-----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEE
Confidence 345677899999999999755 4478899999987543 24567899999876 8999999999999999999999
Q ss_pred eecCCCCHHHHHhhcCCcc------hHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC-------------C
Q 003978 582 EFLPRGSLFRLLQRNTTKL------DWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKH-------------W 642 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l------~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~-------------~ 642 (782)
|||. ++|.+++....... .+..++.++.||+.||+|||+++ |+||||||+||||+.+ +
T Consensus 89 E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~~~~~~~~~~~~~~~~ 165 (434)
T 2rio_A 89 ELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENL 165 (434)
T ss_dssp CCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEECCHHHHSCCTTCCCSC
T ss_pred ecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEecCcccccccccCCCce
Confidence 9995 59999997643211 22345679999999999999999 9999999999999754 4
Q ss_pred cEEEEecCCCcccccccc----cccCCCCCCcccCcccccC-------CCCCchhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 003978 643 TVKVGDFGLSRLKHETYL----TTKTGKGTPQWMAPEVLRN-------EPSDEKSDVYSFGVILWELAT-EKIPWDNLNS 710 (782)
Q Consensus 643 ~vkL~DFGla~~~~~~~~----~~~~~~Gt~~y~aPE~l~~-------~~~s~~sDIwSLG~ll~ellt-G~~Pf~~~~~ 710 (782)
.+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||++|+|++ |..||.....
T Consensus 166 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~ 245 (434)
T 2rio_A 166 RILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245 (434)
T ss_dssp EEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT
T ss_pred EEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh
Confidence 899999999986544321 1224579999999999976 568899999999999999999 9999976544
Q ss_pred HHHHHHhhccccccCC----CCCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhh
Q 003978 711 MQVIGAVGFMNQRLEI----PKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 768 (782)
Q Consensus 711 ~~~~~~i~~~~~~~~~----p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~ 768 (782)
.... .+......... +..+++++.+||.+||..||.+|||+.+++ +|+||+
T Consensus 246 ~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil------~hp~f~ 300 (434)
T 2rio_A 246 RESN-IIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVL------RHPLFW 300 (434)
T ss_dssp HHHH-HHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHH------TSGGGS
T ss_pred hHHH-HhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHH------hCCccC
Confidence 3321 11111111111 113457899999999999999999999994 566664
No 246
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=8.1e-37 Score=327.30 Aligned_cols=235 Identities=23% Similarity=0.387 Sum_probs=189.4
Q ss_pred ccccceeEe-eeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHH-HhCCCCceeEEeeeeec----
Q 003978 502 ILWEDLTIG-EQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLM-KRLRHPNVLLFMGAVTS---- 573 (782)
Q Consensus 502 ~~~~~y~i~-~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il-~~l~HpnIv~l~~~~~~---- 573 (782)
...++|.+. +.||+|+||.||++.+ .++.||||++... ..+.+|+.++ +.++||||+++++++..
T Consensus 14 ~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~ 86 (299)
T 3m2w_A 14 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAG 86 (299)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred ccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCC
Confidence 345678877 7899999999999998 5678999998642 3456788887 66689999999999876
Q ss_pred CCceeEEEeecCCCCHHHHHhhcC-CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC---CCcEEEEec
Q 003978 574 PQRLCIVTEFLPRGSLFRLLQRNT-TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDK---HWTVKVGDF 649 (782)
Q Consensus 574 ~~~~~lv~E~~~ggsL~~~l~~~~-~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~---~~~vkL~DF 649 (782)
...+|+|||||++++|.+++.... ..+++..++.++.||+.||.|||+++ |+||||||+||||+. ++.+||+||
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~~~kl~Df 164 (299)
T 3m2w_A 87 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDF 164 (299)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred CceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEecCCCCCcEEEecc
Confidence 677899999999999999997653 46999999999999999999999999 999999999999998 788999999
Q ss_pred CCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhcc--ccccCCC
Q 003978 650 GLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFM--NQRLEIP 727 (782)
Q Consensus 650 Gla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~--~~~~~~p 727 (782)
|++.... +..++.++|||||||++|+|++|..||...........+... .....++
T Consensus 165 g~a~~~~----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 222 (299)
T 3m2w_A 165 GFAKETT----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP 222 (299)
T ss_dssp TTCEECT----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSC
T ss_pred ccccccc----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCC
Confidence 9985432 234678999999999999999999999876554332221111 1112222
Q ss_pred ----CCCCHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHHHHHHhhcccCc
Q 003978 728 ----KDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRST 773 (782)
Q Consensus 728 ----~~~~~~l~~LI~~cL~~dP~~RPs~~ell~~L~~L~~~~~~~~~~~ 773 (782)
..+++++.+||.+||..||.+|||+.++ +.|+||+.....
T Consensus 223 ~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~------l~hp~~~~~~~~ 266 (299)
T 3m2w_A 223 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF------MNHPWIMQSTKV 266 (299)
T ss_dssp HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHH------HTSHHHHTGGGS
T ss_pred chhcccCCHHHHHHHHHHcccChhhCCCHHHH------hcChhhcccccC
Confidence 5689999999999999999999999999 678999776543
No 247
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.2e-37 Score=349.93 Aligned_cols=241 Identities=16% Similarity=0.163 Sum_probs=188.4
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc--CCeEEEEEEeccCC-CHHHHHHHHHHHHHHHhCCC-Ccee--------------
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY--GSDVAVKVFSRQEY-SDEVIHSFRQEVSLMKRLRH-PNVL-------------- 565 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~--~~~vAiK~~~~~~~-~~~~~~~~~~Ei~il~~l~H-pnIv-------------- 565 (782)
...|++++.||+|+||.||+|.+. ++.||||++..... .....+.+.+|+.+++.+.| +|+.
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 356899999999999999999985 88999999874332 22345678899999999976 2211
Q ss_pred -------EEeeeeec-----CCceeEEEeecCCCCHHHHHh------hcCCcchHHHHHHHHHHHHHHHHhhhcCCCCee
Q 003978 566 -------LFMGAVTS-----PQRLCIVTEFLPRGSLFRLLQ------RNTTKLDWRRRILMALDIARGVSYLHHCNPPII 627 (782)
Q Consensus 566 -------~l~~~~~~-----~~~~~lv~E~~~ggsL~~~l~------~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~iv 627 (782)
.++.++.. ...++++|+++ +++|.+++. .....+++..++.++.||+.||+|||+++ ||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ii 233 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--LV 233 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT--EE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC--cc
Confidence 11111111 22467788877 679999984 22456888999999999999999999999 99
Q ss_pred ecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCCCCCcccCcccc----------cCCCCCchhHHHHHHHHHHH
Q 003978 628 HRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVL----------RNEPSDEKSDVYSFGVILWE 697 (782)
Q Consensus 628 HrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l----------~~~~~s~~sDIwSLG~ll~e 697 (782)
||||||+||||+.++.+||+|||+++..... ....+| +.|+|||++ .+..++.++|||||||++|+
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e 309 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence 9999999999999999999999998765543 335577 999999999 55567889999999999999
Q ss_pred HHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003978 698 LATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVD 757 (782)
Q Consensus 698 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~ell~ 757 (782)
|++|+.||...+....... .......+++++.+||.+||..||.+||++.++++
T Consensus 310 lltg~~Pf~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 310 IWCADLPNTDDAALGGSEW------IFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHSSCCCCTTGGGSCSGG------GGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHCCCCCCCcchhhhHHH------HHhhcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9999999987654332211 12233468899999999999999999999999854
No 248
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=4.1e-39 Score=350.91 Aligned_cols=246 Identities=20% Similarity=0.223 Sum_probs=191.9
Q ss_pred ccccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCC------CHHHHHHHHHHHHHHHhCC---------CCceeE
Q 003978 502 ILWEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEY------SDEVIHSFRQEVSLMKRLR---------HPNVLL 566 (782)
Q Consensus 502 ~~~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~------~~~~~~~~~~Ei~il~~l~---------HpnIv~ 566 (782)
+..++|+++++||+|+||.||+|+++++.||||++..... .....+.+.+|+.+|+.++ |||||+
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 17 LPTEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp SCHHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 4457899999999999999999999999999999986542 2223467888999998886 555555
Q ss_pred Eee-----------------eeec-------------CCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHH
Q 003978 567 FMG-----------------AVTS-------------PQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGV 616 (782)
Q Consensus 567 l~~-----------------~~~~-------------~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL 616 (782)
+++ ++.. ...+|||||||++|++.+.+.+ ..+++..++.++.||+.||
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHH
Confidence 544 4443 6789999999999977666643 4589999999999999999
Q ss_pred Hhhh-cCCCCeeecCCCCCcEEEcCCC--------------------cEEEEecCCCcccccccccccCCCCCCcccCcc
Q 003978 617 SYLH-HCNPPIIHRDLKSSNLLVDKHW--------------------TVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPE 675 (782)
Q Consensus 617 ~~LH-~~~~~ivHrDIKp~NILl~~~~--------------------~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE 675 (782)
.||| +++ ||||||||+||||+.++ .+||+|||+|+..... ..+||+.|+|||
T Consensus 175 ~~lH~~~~--ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~aPE 247 (336)
T 2vuw_A 175 AVAEASLR--FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMDED 247 (336)
T ss_dssp HHHHHHHC--CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTCSG
T ss_pred HHHHHhCC--EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccChh
Confidence 9999 899 99999999999999887 8999999999866543 337899999999
Q ss_pred cccCCCCCchhHHHHHHHH-HHHHHcCCCCCCCCChHH-HHHHhh-ccccc----cCCCCCCCHHHHHHHHHhhhhCCCC
Q 003978 676 VLRNEPSDEKSDVYSFGVI-LWELATEKIPWDNLNSMQ-VIGAVG-FMNQR----LEIPKDVDPRWAAIVESCWHSDPQC 748 (782)
Q Consensus 676 ~l~~~~~s~~sDIwSLG~l-l~elltG~~Pf~~~~~~~-~~~~i~-~~~~~----~~~p~~~~~~l~~LI~~cL~~dP~~ 748 (782)
++.+.. +.++|||||+++ .+++++|..||....... ....+. ..... ...+..+++++++||.+||.+|
T Consensus 248 ~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d--- 323 (336)
T 2vuw_A 248 LFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS--- 323 (336)
T ss_dssp GGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS---
T ss_pred hhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC---
Confidence 999877 899999998777 778889999985421111 111111 01111 1112347889999999999976
Q ss_pred CCCHHHHHHHHHHH-HHHHhh
Q 003978 749 RPSFQELVDKLRDL-QRQYFQ 768 (782)
Q Consensus 749 RPs~~ell~~L~~L-~~~~~~ 768 (782)
|+.++ | +|+||+
T Consensus 324 --sa~e~------l~~Hp~f~ 336 (336)
T 2vuw_A 324 --SATDL------LCQHSLFK 336 (336)
T ss_dssp --SHHHH------HHHCGGGC
T ss_pred --CHHHH------HhcCCCcC
Confidence 99999 6 688885
No 249
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.1e-37 Score=365.91 Aligned_cols=248 Identities=22% Similarity=0.263 Sum_probs=198.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeec------CC
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTS------PQ 575 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~------~~ 575 (782)
.++|++.++||+|+||.||++.+ .++.||||++... ........+.+|+++++.++||||+++++++.. .+
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC-CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 36899999999999999999987 5778999998654 345666789999999999999999999998765 67
Q ss_pred ceeEEEeecCCCCHHHHHhhcC--CcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc---EEEEecC
Q 003978 576 RLCIVTEFLPRGSLFRLLQRNT--TKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWT---VKVGDFG 650 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~~~l~~~~--~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~---vkL~DFG 650 (782)
..|+|||||+|++|.+++.... ..+++..++.++.||+.||.|||++| |+||||||+||||+.++. +||+|||
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g--IVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT--BCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHeEeecCCCceeEEEcccc
Confidence 7899999999999999997643 25889999999999999999999999 999999999999997665 9999999
Q ss_pred CCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHH---------HHhhc--
Q 003978 651 LSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVI---------GAVGF-- 719 (782)
Q Consensus 651 la~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~---------~~i~~-- 719 (782)
++....... ......||+.|+|||++.+..++.++|||||||++|+|++|..||......... ..+..
T Consensus 170 ~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~ 248 (676)
T 3qa8_A 170 YAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYD 248 (676)
T ss_dssp CCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCC
T ss_pred ccccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhh
Confidence 998665433 233567999999999999999999999999999999999999999765332210 00000
Q ss_pred -ccc----------ccCCCCCCCHHHHHHHHHhhhhCCCCCCCHHHH
Q 003978 720 -MNQ----------RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQEL 755 (782)
Q Consensus 720 -~~~----------~~~~p~~~~~~l~~LI~~cL~~dP~~RPs~~el 755 (782)
... ...++..+++.+.+||.+||..||.+|||+.++
T Consensus 249 ~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 000 011223367899999999999999999999997
No 250
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2e-36 Score=361.14 Aligned_cols=247 Identities=23% Similarity=0.317 Sum_probs=201.8
Q ss_pred cccccceeEeeeeccCCcEEEEEEEEc---CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCc-
Q 003978 501 EILWEDLTIGEQIGQGSCGTVYHAVWY---GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQR- 576 (782)
Q Consensus 501 e~~~~~y~i~~~IG~G~~G~Vy~~~~~---~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~- 576 (782)
+...++|++.++||+|+||.||++.+. ++.||||++.... .......+.+|+++++.++|||||++++++...+.
T Consensus 76 ~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 154 (681)
T 2pzi_A 76 DIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG-DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRH 154 (681)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTT
T ss_pred CEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC-CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCC
Confidence 455689999999999999999999984 6789999986532 45556788899999999999999999999987665
Q ss_pred ----eeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCC
Q 003978 577 ----LCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLS 652 (782)
Q Consensus 577 ----~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla 652 (782)
.|||||||+|++|.+++.. .+++..++.++.||+.||.|||++| ||||||||+||||+.+ .+||+|||++
T Consensus 155 ~~~~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~g--iiHrDlkp~NIll~~~-~~kl~DFG~a 228 (681)
T 2pzi_A 155 GDPVGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSIG--LVYNDLKPENIMLTEE-QLKLIDLGAV 228 (681)
T ss_dssp SCEEEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred CCceeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCC--CeecccChHHeEEeCC-cEEEEecccc
Confidence 7999999999999988754 6899999999999999999999999 9999999999999986 9999999999
Q ss_pred cccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCH
Q 003978 653 RLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDP 732 (782)
Q Consensus 653 ~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~ 732 (782)
+..... ....||+.|+|||++.+.. +.++|||||||++|+|++|..||....... . .........++
T Consensus 229 ~~~~~~----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~-------~-~~~~~~~~~~~ 295 (681)
T 2pzi_A 229 SRINSF----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG-------L-PEDDPVLKTYD 295 (681)
T ss_dssp EETTCC----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS-------C-CTTCHHHHHCH
T ss_pred hhcccC----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc-------c-cccccccccCH
Confidence 865443 3457999999999998764 889999999999999999999886421100 0 00000012357
Q ss_pred HHHHHHHHhhhhCCCCCC-CHHHHHHHHHHHHHHHh
Q 003978 733 RWAAIVESCWHSDPQCRP-SFQELVDKLRDLQRQYF 767 (782)
Q Consensus 733 ~l~~LI~~cL~~dP~~RP-s~~ell~~L~~L~~~~~ 767 (782)
.+.+||.+||..||.+|| +++++...|..+.....
T Consensus 296 ~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~ 331 (681)
T 2pzi_A 296 SYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREVV 331 (681)
T ss_dssp HHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHHhh
Confidence 899999999999999999 57788888877765543
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=4.8e-30 Score=299.14 Aligned_cols=184 Identities=16% Similarity=0.123 Sum_probs=132.3
Q ss_pred eeccCCcEEEEEEE--EcCCeEEEEEEeccCC----C----HHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCceeEE
Q 003978 512 QIGQGSCGTVYHAV--WYGSDVAVKVFSRQEY----S----DEVIHSFRQEVSLMKRL-RHPNVLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 512 ~IG~G~~G~Vy~~~--~~~~~vAiK~~~~~~~----~----~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~lv 580 (782)
.++.|++|.++.++ +.|+.|+||++.+... . +...+.+.+|+++|+++ .|+||+++++++++++.+|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 56788888777765 4799999999976532 1 23456799999999999 699999999999999999999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccc
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYL 660 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~ 660 (782)
||||+|++|.++|...+ ++++. .|+.||+.||+|||++| ||||||||+||||+.+|.|||+|||+|+.......
T Consensus 321 MEyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH~~G--IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~ 394 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALEKQG--FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS 394 (569)
T ss_dssp EECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHHHTT--CEESCCCGGGEEECTTSCEEECCCTTEESCC---C
T ss_pred EecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHHHCC--ceeccCchHhEEECCCCCEEEeecccCeeCCCCCc
Confidence 99999999999998654 56654 47889999999999999 99999999999999999999999999987665544
Q ss_pred cccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCC
Q 003978 661 TTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEK 702 (782)
Q Consensus 661 ~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~ 702 (782)
...+.+||+.|||||++.+. +..++|+||+|+++++|.++.
T Consensus 395 ~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 395 WPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp CSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred cccCceechhhccHHHhCCC-CCCcccccccccchhhhcccc
Confidence 44556899999999999875 567899999999988775553
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=1.3e-26 Score=268.53 Aligned_cols=186 Identities=18% Similarity=0.189 Sum_probs=148.5
Q ss_pred eEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCH------HHHHHHHHHHHHHHhCCCCceeEEeeeeecCCceeEEE
Q 003978 508 TIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSD------EVIHSFRQEVSLMKRLRHPNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 508 ~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~------~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~ 581 (782)
...++||+|+||.||++...+..+++|......... ...+.+.+|+++|+.++||||+++..++......||||
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp ---------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 446789999999999998899999999876544322 12456899999999999999996555555677889999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCccccccccc
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLT 661 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~ 661 (782)
|||+|++|.+++.. ++.++.||+.||.|||+++ |+||||||+|||++. .+||+|||+++........
T Consensus 419 E~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~g--IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~ 485 (540)
T 3en9_A 419 SYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKND--VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDK 485 (540)
T ss_dssp ECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHTT--EECTTCCTTSEEESS--SEEECCCTTCEECCCHHHH
T ss_pred ECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHCc--CccCCCCHHHEEECC--eEEEEECccCEECCCcccc
Confidence 99999999999975 5678999999999999999 999999999999999 9999999999876543221
Q ss_pred -------ccCCCCCCcccCcccccC--CCCCchhHHHHHHHHHHHHHcCCCCCC
Q 003978 662 -------TKTGKGTPQWMAPEVLRN--EPSDEKSDVYSFGVILWELATEKIPWD 706 (782)
Q Consensus 662 -------~~~~~Gt~~y~aPE~l~~--~~~s~~sDIwSLG~ll~elltG~~Pf~ 706 (782)
.....||+.|||||++.+ ..|+...|+|+..+-.++.+.++-+|.
T Consensus 486 ~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 486 AVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 134579999999999987 556778899999999999888887774
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=2e-22 Score=214.40 Aligned_cols=146 Identities=22% Similarity=0.208 Sum_probs=115.9
Q ss_pred cceeEeeeeccCCcEEEEEEEE-cCCeEEEEEEeccCCCH----------------HHHHHHHHHHHHHHhCCCCceeEE
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVW-YGSDVAVKVFSRQEYSD----------------EVIHSFRQEVSLMKRLRHPNVLLF 567 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~-~~~~vAiK~~~~~~~~~----------------~~~~~~~~Ei~il~~l~HpnIv~l 567 (782)
..|.+++.||+|+||.||+|.+ .++.||||+++...... .....+.+|+.+|+.++ | +++
T Consensus 90 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v 166 (282)
T 1zar_A 90 KVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAV 166 (282)
T ss_dssp SCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSS
T ss_pred eEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCc
Confidence 3466779999999999999998 46789999986432211 24567889999999998 4 566
Q ss_pred eeeeecCCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEE
Q 003978 568 MGAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVG 647 (782)
Q Consensus 568 ~~~~~~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~ 647 (782)
++++.. +..|+|||||+|++|.+ +.. .....++.||+.||.|||++| |+||||||+||||+ ++.+||+
T Consensus 167 ~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH~~g--iiHrDlkp~NILl~-~~~vkl~ 234 (282)
T 1zar_A 167 PKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFYHRG--IVHGDLSQYNVLVS-EEGIWII 234 (282)
T ss_dssp CCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEEE-TTEEEEC
T ss_pred CeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHHHCC--CEeCCCCHHHEEEE-CCcEEEE
Confidence 665443 56799999999999988 421 123468999999999999999 99999999999999 9999999
Q ss_pred ecCCCcccccccccccCCCCCCcccCccccc
Q 003978 648 DFGLSRLKHETYLTTKTGKGTPQWMAPEVLR 678 (782)
Q Consensus 648 DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~ 678 (782)
|||+++. +..|+|||.+.
T Consensus 235 DFG~a~~-------------~~~~~a~e~l~ 252 (282)
T 1zar_A 235 DFPQSVE-------------VGEEGWREILE 252 (282)
T ss_dssp CCTTCEE-------------TTSTTHHHHHH
T ss_pred ECCCCeE-------------CCCCCHHHHHH
Confidence 9999852 34578899864
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.77 E-value=3.7e-19 Score=186.57 Aligned_cols=138 Identities=20% Similarity=0.214 Sum_probs=107.8
Q ss_pred ceeEeeeeccCCcEEEEEEEE--cCCe--EEEEEEeccCCC----------------------HHHHHHHHHHHHHHHhC
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW--YGSD--VAVKVFSRQEYS----------------------DEVIHSFRQEVSLMKRL 559 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~--~~~~--vAiK~~~~~~~~----------------------~~~~~~~~~Ei~il~~l 559 (782)
-|.+.+.||+|+||.||+|.+ .|+. ||||+++..... ......+.+|+.+|+.+
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 378999999999999999988 7888 999997543211 01224678899999999
Q ss_pred CCCce--eEEeeeeecCCceeEEEeecCC-C----CHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhh-cCCCCeeecCC
Q 003978 560 RHPNV--LLFMGAVTSPQRLCIVTEFLPR-G----SLFRLLQRNTTKLDWRRRILMALDIARGVSYLH-HCNPPIIHRDL 631 (782)
Q Consensus 560 ~HpnI--v~l~~~~~~~~~~~lv~E~~~g-g----sL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH-~~~~~ivHrDI 631 (782)
.|++| +.+++. ...+|||||+.+ | +|.++... .++..+..++.||+.+|.||| ++| ||||||
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~~g--ivHrDl 197 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQEAE--LVHADL 197 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHHTSC--EECSSC
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHHHCC--EEeCCC
Confidence 87754 344432 367899999942 3 77776532 234567788999999999999 988 999999
Q ss_pred CCCcEEEcCCCcEEEEecCCCccc
Q 003978 632 KSSNLLVDKHWTVKVGDFGLSRLK 655 (782)
Q Consensus 632 Kp~NILl~~~~~vkL~DFGla~~~ 655 (782)
||+|||++. .++|+|||+|...
T Consensus 198 kp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 198 SEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp STTSEEESS--SEEECCCTTCEET
T ss_pred CHHHEEEcC--cEEEEECcccccC
Confidence 999999998 9999999999643
No 255
>2gj3_A Nitrogen fixation regulatory protein; PAS domain, FAD, redox sensor, atomic resolution, transferase; HET: FAD; 1.04A {Azotobacter vinelandii}
Probab=99.77 E-value=5.5e-18 Score=154.38 Aligned_cols=118 Identities=20% Similarity=0.320 Sum_probs=106.7
Q ss_pred CHHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEE
Q 003978 128 TDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPA 207 (782)
Q Consensus 128 ~~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~ 207 (782)
.++.|+.++++++++|+++|.+|+|+|+|++|++++||+.+|++|+++..+.++.........++..+..+..+..++..
T Consensus 3 ~~~~~~~~~~~~~~~i~~~d~~g~i~~~N~a~~~~~G~~~~elig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 82 (120)
T 2gj3_A 3 LPEIFRQTVEHAPIAISITDLKANILYANRAFRTITGYGSEEVLGKNESILSNGTTPRLVYQALWGRLAQKKPWSGVLVN 82 (120)
T ss_dssp CHHHHHHHHHHCSSEEEEECTTCBEEEECHHHHHHHCCCTTGGGGCBGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred hHHHHHHHHHhCCCeEEEECCCCCEEeehHHHHHHHCcCHHHHcCCCHHHcCCCCCCHHHHHHHHHHHHcCCCEEEEEEE
Confidence 35789999999999999999999999999999999999999999999998877665444445678888899999999999
Q ss_pred EcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHH
Q 003978 208 KTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQ 245 (782)
Q Consensus 208 ~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk 245 (782)
+++||..+|+.+++.|++|.+|++.+++++++|||++|
T Consensus 83 ~~~dG~~~~~~~~~~pi~~~~g~~~~~v~~~~DITe~k 120 (120)
T 2gj3_A 83 RRKDKTLYLAELTVAPVLNEAGETIYYLGMHRDTSELH 120 (120)
T ss_dssp ECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCSCC
T ss_pred EcCCCCEEEEEEEEEEEECCCCCEEEEEEEeccCcccC
Confidence 99999999999999999999999999999999999864
No 256
>4hia_A LOV protein; PAS, HTH, signaling protein; HET: FMN; 1.95A {Rhodobacter sphaeroides} PDB: 4hnb_A* 4hj4_A* 4hj6_A* 4hj3_A*
Probab=99.75 E-value=2.8e-18 Score=166.77 Aligned_cols=121 Identities=13% Similarity=0.131 Sum_probs=112.9
Q ss_pred HHHHHHHHHcCceeEEEcCC---CcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEE
Q 003978 130 RQYLNILQSMGQSVHIFDLS---DRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFP 206 (782)
Q Consensus 130 ~~~~~ile~~~d~I~v~D~d---G~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~ 206 (782)
+.|+.++++++++|+++|.+ |+|+|+|++|++++||+.++++|+++..++++.........+...+..+..+..++.
T Consensus 7 ~~~~~~~~~~~~~i~~~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 86 (176)
T 4hia_A 7 EKIRAVFDRSGVALTLVDMSLPEQPVVLANPPFLRMTGYTEGQILGFNCRFLQRGDENAQARADIRDALKLGRELQVVLR 86 (176)
T ss_dssp HHHHHHHHHCSSCCEEEETTSTTCCEEEECHHHHHHHTCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEecCCCCCcEEEECHHHHHHHCcCHHHHcCCCcceeeCCCCCHHHHHHHHHHHHcCCceEEEEE
Confidence 56889999999999999999 999999999999999999999999999998877766666678888999999999999
Q ss_pred EEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHH
Q 003978 207 AKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAA 250 (782)
Q Consensus 207 ~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~ 250 (782)
.+++||..+|+.+++.|+++.+|.+.+++++++|||++|++|++
T Consensus 87 ~~~~dG~~~~~~~~~~pi~~~~g~~~~~~~~~~DITe~k~~e~~ 130 (176)
T 4hia_A 87 NYRANDEPFDNLLFLHPVGGRPDAPDYFLGSQFELGRSGNSEEA 130 (176)
T ss_dssp EECTTCCEEEEEEEEEEESSBTTBCSEEEEEEEEESSSGGGHHH
T ss_pred EEcCCCCEEEEEEEEEEeeCCCCCeEEEEEEEEECcHhhHHHHH
Confidence 99999999999999999999999999999999999999999988
No 257
>2pr5_A Blue-light photoreceptor; light-oxygen-voltage, LOV, PER-ARNT-SIM, PAS, flavoprotein, protein; HET: FMN; 1.45A {Bacillus subtilis} PDB: 2pr6_A*
Probab=99.74 E-value=2.4e-17 Score=152.69 Aligned_cols=122 Identities=22% Similarity=0.173 Sum_probs=105.0
Q ss_pred HHHHHcCceeEEEcCCC---cEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEcC
Q 003978 134 NILQSMGQSVHIFDLSD---RIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTK 210 (782)
Q Consensus 134 ~ile~~~d~I~v~D~dG---~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~k 210 (782)
.++++++++|+++|.+| +|+|+|++|++|+||+.+|++|+++..+.++.........+...+..+..+..++..+++
T Consensus 3 ~~~~~~~~~i~~~d~~g~~~~i~~~N~a~~~~~G~~~~el~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~k 82 (132)
T 2pr5_A 3 HMLDHVRVGVVITDPALEDNPIVYVNQGFVQMTGYETEEILGKNCRFLQGKHTDPAEVDNIRTALQNKEPVTVQIQNYKK 82 (132)
T ss_dssp ---CCCCCEEEEECTTSTTCCEEEECHHHHHHHSCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEECT
T ss_pred hHHhcCCCcEEEEeCCCCCCcEEEECHHHHHHhCcCHHHHcCCChhhhCCCCCCHHHHHHHHHHHHcCCCeEEEEEEEec
Confidence 57899999999999976 999999999999999999999999988776655444455677888888889999999999
Q ss_pred CCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHhhcc
Q 003978 211 TEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNS 257 (782)
Q Consensus 211 dG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~ 257 (782)
||..+|+.+++.|+++.+ +.+++++++|||++|++|++|++...+
T Consensus 83 dG~~~~~~~~~~~~~~~~--~~~~~~~~~DITe~k~~e~~l~~~~~~ 127 (132)
T 2pr5_A 83 DGTMFWNELNIDPMEIED--KTYFVGIQNDITKQKEYEKLLEDSLTE 127 (132)
T ss_dssp TSCEEEEEEEEEEEEETT--EEEEEEEEEECHHHHHHHHHHHHHHHH
T ss_pred CCCeeeeEEEEEeccCCC--eeEEEEEEEeCcHHHHHHHHHHHHHHH
Confidence 999999999999998765 889999999999999999999776543
No 258
>1n9l_A PHOT-LOV1, putative blue light receptor; phototropin, flavin, electron transport; HET: FMN; 1.90A {Chlamydomonas reinhardtii} SCOP: d.110.3.6 PDB: 1n9n_A* 1n9o_A*
Probab=99.71 E-value=1.1e-16 Score=143.93 Aligned_cols=105 Identities=23% Similarity=0.287 Sum_probs=95.6
Q ss_pred cCceeEEEcC---CCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEcCCCCEE
Q 003978 139 MGQSVHIFDL---SDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTEERV 215 (782)
Q Consensus 139 ~~d~I~v~D~---dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~ 215 (782)
++++|+++|. +|+|+|+|++|++|+||+.+|++|+++..+.++.........+++++..++.+..++..++|||+.+
T Consensus 2 ~~~~i~i~d~~~~~g~i~~~N~a~~~l~Gy~~~e~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~kdG~~~ 81 (109)
T 1n9l_A 2 LRHTFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQGEGTDPKEVQKIRDAIKKGEACSVRLLNYRKDGTPF 81 (109)
T ss_dssp CSCEEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEECTTSCEE
T ss_pred CccEEEEEcCCCCCCeEEEEchHHHHHHCcCHHHHcCCCchhcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEcCCCCEE
Confidence 6789999994 7999999999999999999999999988877766544455678899999999999999999999999
Q ss_pred EEEEEEEEEECCCCCEEEEEEEEEehhH
Q 003978 216 LVVATNTPFYDDDGTLVGIVCVSTDSRP 243 (782)
Q Consensus 216 ~v~~~~~Pi~d~~G~v~g~v~i~rDITe 243 (782)
|+.+++.|++|++|++.+++++++|||+
T Consensus 82 ~~~~~~~pi~d~~G~~~~~v~~~~DITe 109 (109)
T 1n9l_A 82 WNLLTVTPIKTPDGRVSKFVGVQVDVTS 109 (109)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEECCC
T ss_pred EEEEEEEEEECCCCCEEEEEEEEEeCCC
Confidence 9999999999999999999999999984
No 259
>3p7n_A Sensor histidine kinase; LOV domain, light-activated transcription factor, DNA bindin; HET: FMN; 2.10A {Erythrobacter litoralis}
Probab=99.70 E-value=1.3e-16 Score=166.09 Aligned_cols=126 Identities=18% Similarity=0.163 Sum_probs=108.7
Q ss_pred CcCHHHHHHHHHHcCceeEEEcC---CCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEE
Q 003978 126 NFTDRQYLNILQSMGQSVHIFDL---SDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWT 202 (782)
Q Consensus 126 ~l~~~~~~~ile~~~d~I~v~D~---dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~ 202 (782)
.-.++.|+.++++++++|+++|. +|+|+|||++|++++||+.+|++|+++.+++++.........+...+..+..+.
T Consensus 59 ~~~~~~~~~i~~~~~~~i~~~d~~~~~g~i~~~N~a~~~l~G~~~~el~g~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~ 138 (258)
T 3p7n_A 59 QPPAQWVLDLIEASPIASVVSDPRLADNPLIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWLTDKIRQGVREHKPVL 138 (258)
T ss_dssp --CCHHHHHHHHTCSSEEEEECTTSTTCCEEEECHHHHHHHCCCGGGTTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEE
T ss_pred HhHHHHHHHHHhcCCccEEEEcCCCCCCcEEEEhHHHHHHcCCCHHHHCCCChhhccCCCCchhHHHHHHHHHHcCCCeE
Confidence 34457899999999999999999 899999999999999999999999999999888776666667888899999999
Q ss_pred EEEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHH--HHHHHH
Q 003978 203 GQFPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQ--ETRAAL 251 (782)
Q Consensus 203 ~e~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk--~~E~~L 251 (782)
.++..+++||..+|+.+++.|++|.+|.+.+++++++|||++| +.+.++
T Consensus 139 ~e~~~~~~dG~~~~~~~~~~pi~d~~g~~~~~v~~~~DITerk~~~~e~~~ 189 (258)
T 3p7n_A 139 VEILNYKKDGTPFRNAVLVAPIYDDDDELLYFLGSQVEVDDDQPNMGMARR 189 (258)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEECTTSCSEEEEEEEEEC-------CHHHH
T ss_pred EEEEEEcCCCCEEEEeeEEEEEEcCCCCEEEEEEEeeecchhhhhhhHHHH
Confidence 9999999999999999999999999999999999999999994 444443
No 260
>3ue6_A Aureochrome1; PAS/LOV domain, FMN-binding blue-light photoreceptor, signal protein; HET: FMN; 2.75A {Vaucheria frigida} PDB: 3ulf_A*
Probab=99.69 E-value=4.9e-16 Score=148.24 Aligned_cols=125 Identities=20% Similarity=0.147 Sum_probs=113.2
Q ss_pred CHHHHHHHHHHcCceeEEEcC---CCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEE
Q 003978 128 TDRQYLNILQSMGQSVHIFDL---SDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQ 204 (782)
Q Consensus 128 ~~~~~~~ile~~~d~I~v~D~---dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e 204 (782)
..+.++.++++++++|+++|. +|+|+|+|++|++++||+.++++|+++..++++.........+...+..+..+..+
T Consensus 33 ~~~~~~~~~~~~~~~i~~~d~~~~~g~i~~~N~~~~~l~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e 112 (166)
T 3ue6_A 33 PDYSLVKALQMAQQNFVITDASLPDNPIVYASRGFLTLTGYSLDQILGRNCRFLQGPETDPRAVDKIRNAITKGVDTSVC 112 (166)
T ss_dssp CCCHHHHHHHHTTSCEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHhcCCceEEEEEccCCCCcEEEECHHHHHHhCcCHHHHcCCCHhheeCCCCCHHHHHHHHHHHhcCCceEEE
Confidence 346799999999999999999 79999999999999999999999999998888776555566778888899999999
Q ss_pred EEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHH
Q 003978 205 FPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALW 252 (782)
Q Consensus 205 ~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~ 252 (782)
+...+++|..+|+.+++.|+++.+|.+.|++++++|||++|+.+...+
T Consensus 113 ~~~~~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DITe~k~~~~~~e 160 (166)
T 3ue6_A 113 LLNYRQDGTTFWNLFFVAGLRDSKGNIVNYVGVQSKVSEDYAKLLVNE 160 (166)
T ss_dssp EEEECTTSCEEEEEEEEEEEECTTSCEEEEEEECCBCCHHHHHHHHHH
T ss_pred EEEEcCCCCEEEEEEEEEeeeCCCCCEEEEEEEEEechHHHHHHHHHh
Confidence 999999999999999999999999999999999999999998876643
No 261
>3sw1_A Sensory box protein; light-oxygen-voltage, LOV, PAS, signaling protein; HET: FMN; 2.63A {Pseudomonas putida}
Probab=99.68 E-value=1.1e-15 Score=145.46 Aligned_cols=133 Identities=19% Similarity=0.155 Sum_probs=120.6
Q ss_pred cCcCHHHHHHHHHHcCceeEEEcCCC---cEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeE
Q 003978 125 FNFTDRQYLNILQSMGQSVHIFDLSD---RIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERW 201 (782)
Q Consensus 125 ~~l~~~~~~~ile~~~d~I~v~D~dG---~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~ 201 (782)
.....+.++.++++++++|+++|.+| +|+++|+++++++||+.++++|+++..++++.........+...+..+..+
T Consensus 20 ~~~~~~~~~~i~~~~~~~i~~~d~~~~~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (162)
T 3sw1_A 20 HMINAQLLQSMVDASNDGIVVAEKEGDDTILIYVNAAFEYLTGYSRDEILYQDCRFLQGDDRDQLGRARIRKAMAEGRPC 99 (162)
T ss_dssp -CCCHHHHHHHHHTCSSEEEEEEEETTEEEEEEECHHHHHHHTCCHHHHTTSBGGGGTTTCCCCHHHHHHHHHHHHTCCE
T ss_pred ccchHHHHHHHHhhccCcEEEEeCCCCccEEEEECHHHHHHHCCCHHHHcCCCcceecCCCcCHHHHHHHHHHHhcCCCC
Confidence 44567899999999999999999999 999999999999999999999999998888776666666778888999999
Q ss_pred EEEEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHhhcc
Q 003978 202 TGQFPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNS 257 (782)
Q Consensus 202 ~~e~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~ 257 (782)
..++...+++|..+|+.+++.|+.+.+|.+.+++++++|||++++++++|+.....
T Consensus 100 ~~~~~~~~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DiTe~k~~e~~l~~~~~~ 155 (162)
T 3sw1_A 100 REVLRNYRKDGSAFWNELSITPVKSDFDQRTYFIGIQKDVSRQVELERELAELRAR 155 (162)
T ss_dssp EEEEEEECTTCCEEEEEEEEEEEECSSSSCEEEEEEEEECHHHHHHHHHHHHHTC-
T ss_pred cceEEEECCCCCEEEEEEEEEEeecCCCCEEEEEEEEEeCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999877654
No 262
>3t50_A Blue-light-activated histidine kinase; PAS superfamily, blue-light photoreceptor, FMN binding, TRAN; HET: FMN; 1.64A {Brucella melitensis}
Probab=99.68 E-value=3e-16 Score=142.89 Aligned_cols=119 Identities=19% Similarity=0.143 Sum_probs=103.2
Q ss_pred HHHHcCceeEEEcC---CCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEcCC
Q 003978 135 ILQSMGQSVHIFDL---SDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKT 211 (782)
Q Consensus 135 ile~~~d~I~v~D~---dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kd 211 (782)
++++++++|+++|. +|+|+++|++|++++||+.++++|+++.+++++.........+...+..+..+..++...+++
T Consensus 2 ~~~~~~~~i~~~d~~~~~g~i~~~N~~~~~l~g~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (128)
T 3t50_A 2 ASEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADEVMGRNCRFLQGHGTDPAHVRAIKSAIAAEKPIDIDIINYKKS 81 (128)
T ss_dssp CCCCCSSCEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEECTT
T ss_pred ccccCcccEEEecCCCCCCcEEEEcHHHHHHhCcCHHHHcCCCHhhhcCCccCHHHHHHHHHHHHcCCCceeEEEEEcCC
Confidence 46788999999999 999999999999999999999999999998877766555667788888999999999999999
Q ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHH
Q 003978 212 EERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWD 253 (782)
Q Consensus 212 G~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~ 253 (782)
|..+|+.+++.|+.+.+|.+.+++++++|||++|++|++..+
T Consensus 82 g~~~~~~~~~~~i~~~~g~~~~~~~~~~DITe~k~~e~~~~~ 123 (128)
T 3t50_A 82 GEAFWNRLHISPVHNANGRLQHFVSSQLDVTLELVPRGSLEH 123 (128)
T ss_dssp CCEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHC-------
T ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEEcchhhhhhhhhhh
Confidence 999999999999999999999999999999999999887644
No 263
>3f1p_B ARYL hydrocarbon receptor nuclear translocator; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.0 PDB: 3f1o_B* 3f1n_B 3h7w_B* 3h82_B* 1x0o_A 2hv1_A 4h6j_B 2b02_A* 2k7s_A 2a24_B
Probab=99.66 E-value=1.6e-16 Score=144.47 Aligned_cols=117 Identities=13% Similarity=0.192 Sum_probs=97.8
Q ss_pred HHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHH-cCCeEEEEEEEE
Q 003978 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIK-MGERWTGQFPAK 208 (782)
Q Consensus 130 ~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~-~g~~~~~e~~~~ 208 (782)
+++..+++++++.|+++|.+|+|+|+|+++++++||+++|++|+++.+++++++.......+..++. .+..+..+++++
T Consensus 2 ~~~~ll~e~~~d~i~~~d~~g~i~~~n~~~~~~~G~~~~el~g~~~~~~i~p~d~~~~~~~~~~~~~~~~~~~~~e~r~~ 81 (121)
T 3f1p_B 2 EFKGLNVCQPTRFISRHNIEGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFR 81 (121)
T ss_dssp ------CCCCCEEEEEECTTSBEEEECTTHHHHHSCCGGGTTTSBGGGGBCTTTHHHHHHHHHHHTTSTTCCEEEEEEEE
T ss_pred CcccceecCCCceEEEECCCceEEEECcchhhhhCCChHHHcCCCHHHeECHHHHHHHHHHHHHHHhcCCCcccEEEEEE
Confidence 4567789999999999999999999999999999999999999999999998876554455556664 455688899999
Q ss_pred cCCCCEEEEEEEEEEEECC-CCCEEEEEEEEEehhHHHH
Q 003978 209 TKTEERVLVVATNTPFYDD-DGTLVGIVCVSTDSRPFQE 246 (782)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~-~G~v~g~v~i~rDITerk~ 246 (782)
++||..+|+.++..|++|. +|++.+++++.+|||++|+
T Consensus 82 ~~dG~~~w~~~~~~~~~~~~~g~~~~iv~~~~DIT~~kq 120 (121)
T 3f1p_B 82 SKNQEWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQ 120 (121)
T ss_dssp CTTSCEEEEEEEEEEECCTTCCCCCEEEEEEEECCCC--
T ss_pred ecCCCEEEEEEEEEEEECCCCCceeEEEEEeEEcccccC
Confidence 9999999999999999987 7899999999999999875
No 264
>3k3c_A Protein RV1364C/MT1410; sensor, PAS, signal transduction, fatty-acid binding, sigma regulator, signaling protein; HET: PLM; 1.62A {Mycobacterium tuberculosis} PDB: 3k3d_A
Probab=99.64 E-value=1.8e-15 Score=143.92 Aligned_cols=128 Identities=15% Similarity=0.101 Sum_probs=108.3
Q ss_pred CHHHHHHHHHHcCceeEEEc-CCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEE
Q 003978 128 TDRQYLNILQSMGQSVHIFD-LSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFP 206 (782)
Q Consensus 128 ~~~~~~~ile~~~d~I~v~D-~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~ 206 (782)
..+.|+.++++++++|+++| .+|+|+++|+++++++|++ +++|+++.+++++.........+.+++..|++...+..
T Consensus 15 ~~~~~~~~~~~~~~~i~~~d~~~~~i~~~N~~~~~~~g~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 92 (158)
T 3k3c_A 15 AAEDVRRIFEHIPAILVGLEGPDHRFVAVNAAYRGFSPLL--DTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQSGSEW 92 (158)
T ss_dssp CHHHHHHHHHHCSSEEEEEETTTTEEEEECHHHHHHCTTC--CSTTSBHHHHSGGGGGTTHHHHHHHHHHHCCCEEEEEE
T ss_pred HHHHHHHHHhcCCceEEEEECCCcEeHHHHHHHHHHcCCc--hhcCCcHHHhCCchhHHHHHHHHHHHHHhCCcccccce
Confidence 35789999999999999999 9999999999999999999 99999999999876655555667788888887544322
Q ss_pred -E--EcC-C-CCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHhhcc
Q 003978 207 -A--KTK-T-EERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNS 257 (782)
Q Consensus 207 -~--~~k-d-G~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~ 257 (782)
. .+. + |..+|+.++..|+++.+|.+.|++++++|||++|++|++|+....+
T Consensus 93 ~~~~~~~~~~g~~~~~~~~~~pi~~~~g~~~g~~~~~~DITe~k~~e~~l~~~~~~ 148 (158)
T 3k3c_A 93 RLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQAAEARVEE 148 (158)
T ss_dssp EEEEESSSSCEEEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHHHHHHHHHHHHH
T ss_pred eEEeccCCCCcceEEEEEEEEEeECCCCCEEEEEEEEEehhHHHHHHHHHHHHHHH
Confidence 2 232 2 7789999999999999999999999999999999999998765543
No 265
>2vv6_A FIXL, sensor protein FIXL; signaling protein, transferase, phosphoprotein, nitrogen FIX PER-ARNT-SIM, metal-binding, PAS, iron, heme; HET: HEM; 1.5A {Bradyrhizobium japonicum} PDB: 1xj6_A* 1xj4_A* 2vv7_A* 2vv8_A* 1lsw_A* 1dp8_A* 1dp9_A* 1drm_A* 1lsv_A* 1dp6_A* 1lsx_A* 1lt0_A* 1y28_A* 2cmn_A* 1xj3_A* 1xj2_A* 2owh_A* 2owj_A*
Probab=99.64 E-value=1.2e-15 Score=138.33 Aligned_cols=113 Identities=17% Similarity=0.140 Sum_probs=81.1
Q ss_pred cCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCe----EEEEEEEEcCCCCE
Q 003978 139 MGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGER----WTGQFPAKTKTEER 214 (782)
Q Consensus 139 ~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~----~~~e~~~~~kdG~~ 214 (782)
++++|+++|.+|+|+++|++|++|+||+++|++|+++..++++.........+...+..+.. ...++..+++||..
T Consensus 2 ~~d~i~~~d~~g~i~~~N~a~~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~ 81 (119)
T 2vv6_A 2 IPDAMIVIDGHGIIQLFSTAAERLFGWSELEAIGQNVNILMPEPDRSRHDSYISRYRTTSDPHIIGIGRIVTGKRRDGTT 81 (119)
T ss_dssp CCCEEEEEETTSBEEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHHHHHHHCCCSSTTTCEEEEEECTTSCE
T ss_pred CcceEEEECCCCeEEEEhHHHHHHhCCCHHHHcCCCHHHhCCchHHHHHHHHHHHHhcCCCcccCCCceEEEEEeCCCCE
Confidence 67899999999999999999999999999999999999888765432222233344444443 23467788999999
Q ss_pred EEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHH
Q 003978 215 VLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWD 253 (782)
Q Consensus 215 ~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~ 253 (782)
+|+.+++.|+.+.+ ..+++++++|||++|++|++|++
T Consensus 82 ~~~~~~~~~~~~~~--~~~~~~~~~DITerk~~e~~l~~ 118 (119)
T 2vv6_A 82 FPMHLSIGEMQSGG--EPYFTGFVRDLTEHQQTQARLQE 118 (119)
T ss_dssp EEEEEEEEEEEETT--EEEEEEEEEECC-----------
T ss_pred EEEEEEEEEEEECC--eEEEEEEEEEcHHHHHHHHHHHh
Confidence 99999999998643 35689999999999999998864
No 266
>4eet_B Phototropin-2; LOV, blue light photoreceptor, signaling protein, flavoprote; HET: FMN; 1.20A {Arabidopsis thaliana} PDB: 4ees_A* 4eer_A* 4eep_A* 4eeu_A* 1jnu_A* 1g28_A*
Probab=99.63 E-value=2.6e-15 Score=132.82 Aligned_cols=110 Identities=24% Similarity=0.197 Sum_probs=98.7
Q ss_pred HHHHcCceeEEEcC---CCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEcCC
Q 003978 135 ILQSMGQSVHIFDL---SDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKT 211 (782)
Q Consensus 135 ile~~~d~I~v~D~---dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kd 211 (782)
.+++++++|+++|. +|+|+|+|++|++++||+.++++|+++..++++.........+...+..+..+..++...+++
T Consensus 2 ~l~~~~~~i~~~d~~~~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (115)
T 4eet_B 2 SPEFIEKNFVITDPRLPDNPIIFASDGFLELTEYSREEILGRNARFLQGPETDQATVQKIRDAIRDQRETTVQLINYTKS 81 (115)
T ss_dssp ---CCCCSEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEECTT
T ss_pred ccccCCCcEEEEcCCCCCCcEEEEcHHHHHHHCcCHHHHhCCCHHHhcCCCCChHHHHHHHHHHHcCCCcceEEEEecCC
Confidence 47889999999999 999999999999999999999999999888877765555566788888999998899999999
Q ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEehhHH
Q 003978 212 EERVLVVATNTPFYDDDGTLVGIVCVSTDSRPF 244 (782)
Q Consensus 212 G~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITer 244 (782)
|..+|+.+++.|+++.+|.+.+++++++|||++
T Consensus 82 g~~~~~~~~~~~~~~~~g~~~~~~~~~~DITer 114 (115)
T 4eet_B 82 GKKFWNLLHLQPVRDQKGELQYFIGVQLDGSDH 114 (115)
T ss_dssp CCEEEEEEEEEEEECTTSCEEEEEEEEEECSCC
T ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEeeccc
Confidence 999999999999999999999999999999975
No 267
>3mqq_A Transcriptional regulator, LUXR family; PAS domain, PSI, MCSG, structural genomics, center for structural genomics; 1.65A {Burkholderia thailandensis} PDB: 3mqo_A
Probab=99.62 E-value=9e-16 Score=139.21 Aligned_cols=114 Identities=11% Similarity=0.074 Sum_probs=94.1
Q ss_pred HHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCcccccccccc-ccHHHHHHHHHHcCCeEEEEEEEEcC
Q 003978 132 YLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRD-FDVAYDIVHRIKMGERWTGQFPAKTK 210 (782)
Q Consensus 132 ~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~-~~~~~~l~~~l~~g~~~~~e~~~~~k 210 (782)
|+.++++++++|+ +|.+|+|+++|++|++|+||+.++++|+++..++++... ......+...+..+..+..+..+.++
T Consensus 5 ~~~~~~~~~~~i~-~~~~g~i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 83 (120)
T 3mqq_A 5 YKTAFHLAPIGLV-LSRDRVIEDCNDELAAIFRCARADLIGRSFEVLYPSSDEFERIGERISPVMIAHGSYADDRIMKRA 83 (120)
T ss_dssp HHHHHHHCSSEEE-EEETTEEEEECHHHHHHTTSCHHHHTTCBGGGGSSSHHHHHHHHHHHHHHHHHHSCEEEEEEEECT
T ss_pred HHHHHhcCCceEE-EecCCEEHHHHHHHHHHhCcCHHHhCCCchhhccCChhhHHHHHHHHHHHHhcCCcceEEEEEEeC
Confidence 8899999999996 578999999999999999999999999999988765433 22333456667778888889999999
Q ss_pred CCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHH
Q 003978 211 TEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQET 247 (782)
Q Consensus 211 dG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~ 247 (782)
||..+|+.++..|+ +.+|.+.+++++++|||++|++
T Consensus 84 dG~~~~~~~~~~~~-~~~~~~~~~v~~~~DITerk~~ 119 (120)
T 3mqq_A 84 GGELFWCHVTGRAL-DRTAPLAAGVWTFEDLSATRRV 119 (120)
T ss_dssp TSCEEEEEEEEEES-STTSTTSSEEEEEEESCC----
T ss_pred CCCEEEEEEEEEEC-CCCCCceeEEEEEEcccHhhcc
Confidence 99999999999998 5566667899999999999976
No 268
>3mr0_A Sensory box histidine kinase/response regulator; PAS fold, structural genomics, PSI-2; HET: PG5; 1.49A {Burkholderia thailandensis}
Probab=99.62 E-value=5.9e-15 Score=138.75 Aligned_cols=130 Identities=9% Similarity=0.166 Sum_probs=112.8
Q ss_pred cCHHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcC--CCccccccccccccHHHHHHHHHHcCCeEEEE
Q 003978 127 FTDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALG--QDAIELLTDGRDFDVAYDIVHRIKMGERWTGQ 204 (782)
Q Consensus 127 l~~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG--~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e 204 (782)
.+++.|+.++++++++++.+|.++.++|+|+++++++||+.+++.+ ..+..+++|++.......+..++..+..+..+
T Consensus 6 ~se~rl~~~~~~~~~g~w~~d~~~~~~~~s~~~~~~~G~~~~~~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~~~~~~~e 85 (142)
T 3mr0_A 6 ASEERFQLAVSGASAGLWDWNPKTGAMYLSPHFKKIMGYEDHELPDEITGHRESIHPDDRARVLAALKAHLEHRDTYDVE 85 (142)
T ss_dssp ---CCHHHHHHHTTCEEEEECTTTCCEEECHHHHHHTTCCGGGSCSEEC---CCBCTTTHHHHHHHHHHHHHHCCCEEEE
T ss_pred HHHHHHHHHHHhCCcEEEEEEcCCCeEEECHHHHHHhCCCccccCCCHHHHHhhcCHHHHHHHHHHHHHHHhCCCceEEE
Confidence 3456699999999999999999999999999999999999999877 34667888887666666677788888889999
Q ss_pred EEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHhhc
Q 003978 205 FPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKN 256 (782)
Q Consensus 205 ~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~ 256 (782)
+++.++||..+|+.....|++|.+|++++++++++|||++|++|++|+...+
T Consensus 86 ~r~~~~~G~~~w~~~~~~~~~d~~g~~~~~~G~~~DITerk~~E~~L~~~~~ 137 (142)
T 3mr0_A 86 YRVRTRSGDFRWIQSRGQALWNSAGEPYRMVGWIMDVTDRKRDEDALRVSRE 137 (142)
T ss_dssp EEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEcCchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999977654
No 269
>3lyx_A Sensory BOX/ggdef domain protein; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Colwellia psychrerythraea}
Probab=99.61 E-value=5.6e-15 Score=130.97 Aligned_cols=119 Identities=24% Similarity=0.415 Sum_probs=104.8
Q ss_pred HHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEE
Q 003978 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAK 208 (782)
Q Consensus 129 ~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~ 208 (782)
.+.++.++++++++|+++|.+|+|+++|+++++++|++.++++|+++..+.++.........+...+..+..+..+....
T Consensus 6 ~~~~~~~~~~~~~~i~~~d~~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (124)
T 3lyx_A 6 LKQRAKAFDYVFDAIVVTDLQGFIIDWNKGSETLYGYSKEQAIGQPVNMLHVPGDTEHITSEVISAVENQGKWTGEIRML 85 (124)
T ss_dssp HHHHHHGGGTCSSEEEEEETTCBEEEECHHHHHHHCCCHHHHTTSBGGGGSCTTTHHHHHHHHHHHHHHTSCEEEEEEEE
T ss_pred HHHHHHHHhhcCceEEEECCCCcEeehhhHHHHHhCCCHHHHcCCCHHHhcCcchhhHHHHHHHHHHHcCCcccceEEEE
Confidence 46789999999999999999999999999999999999999999999966665554444456778888899898899999
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHH
Q 003978 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQET 247 (782)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~ 247 (782)
.++|..+|+.++..|+.+.+|.+.|++++++|||+++++
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~l 124 (124)
T 3lyx_A 86 HKDGHIGWIESMCVPIYGENYQMVGALGINRDITKRKKE 124 (124)
T ss_dssp CTTSCEEEEEEEEEEEECSTTCEEEEEEEEEECSCC---
T ss_pred ccCCCEEEEEEEEEEEECCCCCEEEEEEEEecchhhhcC
Confidence 999999999999999999999999999999999998753
No 270
>3f1p_A Endothelial PAS domain-containing protein 1; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.7 PDB: 3f1o_A* 3f1n_A 3h7w_A* 3h82_A* 1p97_A 2a24_A 4h6j_A
Probab=99.61 E-value=1.2e-15 Score=137.45 Aligned_cols=108 Identities=19% Similarity=0.228 Sum_probs=97.5
Q ss_pred cCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEcCCCCEEEEE
Q 003978 139 MGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTEERVLVV 218 (782)
Q Consensus 139 ~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~~v~ 218 (782)
.++.|+++|.+|+|+|+|+++++++||+++|++|+++.+++++++.......+..++..+..+..+++++++||..+|+.
T Consensus 8 ~~~~i~~~d~~g~i~~~n~~~~~~~Gy~~~el~g~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~~~w~~ 87 (117)
T 3f1p_A 8 SKTFLSEHSMDMKFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLE 87 (117)
T ss_dssp GGEEEEEECTTCBEEEECTHHHHHHCCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHHHHSEEECCCEEEECTTSSEEEEE
T ss_pred CccEEEEECCCceEEEECcChhhhhCCCHHHHcCCchhheECHHHHHHHHHHHHHHHhCCCeeeeEEEEEecCCCEEEEE
Confidence 45789999999999999999999999999999999999999988866555567777888888888999999999999999
Q ss_pred EEEEEEECC-CCCEEEEEEEEEehhHHHH
Q 003978 219 ATNTPFYDD-DGTLVGIVCVSTDSRPFQE 246 (782)
Q Consensus 219 ~~~~Pi~d~-~G~v~g~v~i~rDITerk~ 246 (782)
++..|++|. +|.+.+++++.+|||++++
T Consensus 88 ~~~~~~~d~~~g~~~~iv~~~~DITer~~ 116 (117)
T 3f1p_A 88 TQGTVIYNPRNLQPQCIMCVNYVLSEIEK 116 (117)
T ss_dssp EEEEEEEETTTTEEEEEEEEEEECSCCBC
T ss_pred EeeEEEECCCCCCceEEEEEeeecccccc
Confidence 999999987 8899999999999998864
No 271
>2z6d_A Phototropin-2; PAS-fold, LOV-fold, alternative splicing, ATP-binding, chromophore, flavoprotein, FMN, kinase, membrane, nucleotide-binding; HET: FMN; 2.00A {Arabidopsis thaliana} PDB: 2z6c_A*
Probab=99.61 E-value=8.8e-15 Score=130.56 Aligned_cols=122 Identities=20% Similarity=0.278 Sum_probs=105.7
Q ss_pred HHHHHHHHHHcCceeEEEc---CCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEE
Q 003978 129 DRQYLNILQSMGQSVHIFD---LSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQF 205 (782)
Q Consensus 129 ~~~~~~ile~~~d~I~v~D---~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~ 205 (782)
++.++.++++++++|+++| .+|.|+++|+++++++|++.++++|+++..++++.........+...+..+..+..++
T Consensus 5 ~~~~~~~~~~~~~~i~~~d~~d~~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (130)
T 2z6d_A 5 SQELKTALSTLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRFLQGPDTDKNEVAKIRDCVKNGKSYCGRL 84 (130)
T ss_dssp --CHHHHHHHTTCEEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHhcccceeeeeccCCCCcEEEecHHHHHHhCcCHHHHcCCChhhccCCCCCchHHHHHHHHHHcCCcceeEE
Confidence 3568999999999999999 9999999999999999999999999999988877665555566778888888888888
Q ss_pred EEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHH
Q 003978 206 PAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAA 250 (782)
Q Consensus 206 ~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~ 250 (782)
...+++|..+|+.+...|+.+.+|.+.+++++++|||++++++++
T Consensus 85 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~~e~e 129 (130)
T 2z6d_A 85 LNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQVEVSKYTEGVND 129 (130)
T ss_dssp EEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCTTC-----
T ss_pred EEEcCCCcEEEEEEEEEEEECCCCCeeEEEEEEecchHHHHhhcc
Confidence 889999999999999999999999999999999999999987654
No 272
>2r78_A Sensor protein; sensory box sensor histidine kinase/response regulator, structural genomics, PSI, MCSG; 1.60A {Geobacter sulfurreducens pca}
Probab=99.60 E-value=7.7e-15 Score=133.31 Aligned_cols=114 Identities=19% Similarity=0.198 Sum_probs=92.3
Q ss_pred CccCcCHHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEE
Q 003978 123 SAFNFTDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWT 202 (782)
Q Consensus 123 ~a~~l~~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~ 202 (782)
..+...++.|+.++++++++|+++|.+|+|+++|+++++|+||+++|++|+++..+.++.. ......++..+..+..+.
T Consensus 4 ~~l~~se~~~~~l~e~~~d~i~~~d~~g~i~~vN~a~~~l~Gy~~~el~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 82 (117)
T 2r78_A 4 ENLYFQSNAYRALFEHAIDGIFIMDAEGHYLDVNPAICSAIGYTRDEFLALDWGVLSRGVD-SGWAAASLARIVGGEPLR 82 (117)
T ss_dssp CSHHHHHHHHHHHHHHCSSEEEEECTTSBEEEECHHHHHHHCCCHHHHTTCBTTTTTTCST-TSHHHHHHHHHHTTCCEE
T ss_pred hHHHHhHHHHHHHHhcCCceEEEECCCCCEEEecHHHHHHHCcCHHHHcCCCHHHhCCccc-hhHHHHHHHHHHcCCcEE
Confidence 3344567889999999999999999999999999999999999999999999876654332 222334566677787788
Q ss_pred EEEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehh
Q 003978 203 GQFPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSR 242 (782)
Q Consensus 203 ~e~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDIT 242 (782)
.+.+.+++||+.+|+.+++.|+. +|+ ++++++|||
T Consensus 83 ~e~~~~~kdG~~~~v~~~~~~~~--~g~---~~~i~~DIT 117 (117)
T 2r78_A 83 EERTVWTRNGDQLTVELSAHLLP--DGK---ILGIARDVS 117 (117)
T ss_dssp EEEEEECTTSCEEEEEEEEEECT--TSC---EEEEEEC--
T ss_pred EEEEEEecCCCEEEEEEEEEEec--CCe---EEEEEEeCC
Confidence 88999999999999999999985 566 567899997
No 273
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.60 E-value=9.4e-16 Score=168.64 Aligned_cols=136 Identities=17% Similarity=0.154 Sum_probs=98.4
Q ss_pred eeEeeeeccCCcEEEEEEEE-cCCeEEEEEEeccCC---------------CHH-----HHHHHHHHHHHHHhCCCCcee
Q 003978 507 LTIGEQIGQGSCGTVYHAVW-YGSDVAVKVFSRQEY---------------SDE-----VIHSFRQEVSLMKRLRHPNVL 565 (782)
Q Consensus 507 y~i~~~IG~G~~G~Vy~~~~-~~~~vAiK~~~~~~~---------------~~~-----~~~~~~~Ei~il~~l~HpnIv 565 (782)
|.++++||.|+||.||+|.. .|+.||||+++.... ... ......+|...|..+.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 89999999999999999986 678999999753211 000 011223567777777544432
Q ss_pred --EEeeeeecCCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC-
Q 003978 566 --LFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHW- 642 (782)
Q Consensus 566 --~l~~~~~~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~- 642 (782)
..++. ...+|||||++|++|.++... .....++.||+.+|.+||++| ||||||||.||||++++
T Consensus 177 vp~p~~~----~~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH~~g--IVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 177 VPEPIAQ----SRHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLAKHG--LIHGDFNEFNILIREEKD 243 (397)
T ss_dssp CCCEEEE----ETTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEEEEEEC
T ss_pred CCeeeec----cCceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHEEEeCCCC
Confidence 22322 234799999998887554321 123457789999999999999 99999999999998776
Q ss_pred ---------cEEEEecCCCccc
Q 003978 643 ---------TVKVGDFGLSRLK 655 (782)
Q Consensus 643 ---------~vkL~DFGla~~~ 655 (782)
.+.|+||+-+...
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCEET
T ss_pred cccccccccceEEEEeCCcccC
Confidence 3899999977543
No 274
>3ewk_A Sensor protein; PAS domain, alpha/beta fold, kinase, phosphoprotein, transfe flavoprotein; HET: FAD; 2.34A {Methylococcus capsulatus}
Probab=99.59 E-value=9.7e-15 Score=149.01 Aligned_cols=113 Identities=27% Similarity=0.342 Sum_probs=102.9
Q ss_pred eeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEcCCCCEEEEEEEE
Q 003978 142 SVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTEERVLVVATN 221 (782)
Q Consensus 142 ~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~~v~~~~ 221 (782)
.|+++|.+|+|+|+|++|++|+||+++|++|+++..+.++.........+++.+..+..+..++..+++||..+|+.+++
T Consensus 1 ~i~i~D~~g~i~~~N~a~~~l~Gy~~~el~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~ 80 (227)
T 3ewk_A 1 LVSITDLQGRILYANDNFCAVSRYGREELVGQDHRIVNSGYHGKAYIRDMWRTISRGNIWQGEFCNRRKDGTRYWVDSTI 80 (227)
T ss_dssp CEEEEETTCBEEEECHHHHHHTTCCHHHHTTSBGGGGCCSCSCHHHHHHHHHHHTTTCCEEEEEEEECSSSCEEEEEEEE
T ss_pred CEEEECCCCcEEehHHHHHHHHCcCHHHHcCCCHHHcCCCCCCHHHHHHHHHHHHcCCeEEEEEEEEcCCCCEEeeeeEE
Confidence 37899999999999999999999999999999998887665555555677888999999999999999999999999999
Q ss_pred EEEECCCCCEEEEEEEEEehhHHHHHHHHHHHh
Q 003978 222 TPFYDDDGTLVGIVCVSTDSRPFQETRAALWDT 254 (782)
Q Consensus 222 ~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~ 254 (782)
.|++|.+|++.+++++.+|||++|++|++|+..
T Consensus 81 ~p~~d~~g~~~~~~~~~~DIT~~k~~e~~l~~~ 113 (227)
T 3ewk_A 81 VPLMDNAGKPRQYISIRRDITAQKEAEAQLARL 113 (227)
T ss_dssp EEEECSSSCEEEEEEEEEECTTTTHHHHHHHHH
T ss_pred EEEEcCCCCEEEEEEEEEehhhHHHHHHHHHHH
Confidence 999999999999999999999999999988654
No 275
>3nja_A Probable ggdef family protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.37A {Chromobacterium violaceum}
Probab=99.59 E-value=6.1e-15 Score=132.42 Aligned_cols=120 Identities=6% Similarity=0.101 Sum_probs=93.7
Q ss_pred cCHHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcC--CCccccccccccccHHHHHHHHHHcCCeEEEE
Q 003978 127 FTDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALG--QDAIELLTDGRDFDVAYDIVHRIKMGERWTGQ 204 (782)
Q Consensus 127 l~~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG--~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e 204 (782)
..++.|+.++++++++|+++|.+|.++++|+++++++||+.++++| ..+..++++++.......+..++..+..+..+
T Consensus 4 ~~~~~l~~~~~~~~~~i~~~d~~~~~~~~n~~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~e 83 (125)
T 3nja_A 4 MAEKLLHTAESDAGIGSWVLHMESGRLEWSQAVHDIFGTDSATFDATEDAYFQRVHPDDRARVRRELDRHVLGDRPFDVE 83 (125)
T ss_dssp -------------CCEEEEEETTTTEEEECHHHHHHHTCCTTTCCCBHHHHHHHBCTTTHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHHhCCeeEEEEEcCCCcEEECHHHHHHhCCCcccccccHHHHHhhcChhHHHHHHHHHHHHHhcCCCceEE
Confidence 3457799999999999999999999999999999999999999999 66667777776555555667778888888889
Q ss_pred EEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHH
Q 003978 205 FPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQE 246 (782)
Q Consensus 205 ~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~ 246 (782)
+++.+++|..+|+.+...|+.+.+|.+.+++++++|||++|+
T Consensus 84 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~g~~~DITe~k~ 125 (125)
T 3nja_A 84 YRIVRPDGQVRELLERNHIQRQASGQVDHLWGTVIDMTEHKQ 125 (125)
T ss_dssp EEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCC---
T ss_pred EEEECCCCCEEEEEEeeEEEECCCCCEEEEEEEEEecccccC
Confidence 999999999999999999999999999999999999999874
No 276
>3luq_A Sensor protein; PAS, histidine, kinase, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: PGE; 2.49A {Geobacter sulfurreducens}
Probab=99.57 E-value=2e-14 Score=127.06 Aligned_cols=112 Identities=16% Similarity=0.164 Sum_probs=92.4
Q ss_pred HHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEE-EEE
Q 003978 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQ-FPA 207 (782)
Q Consensus 129 ~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e-~~~ 207 (782)
++.|+.++++++++|+++|.+|+|+++|+++++++|++.++++|+++.++++ +... ........+..+.....+ ...
T Consensus 2 e~~~~~~~~~~~~~i~~~d~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~ 79 (114)
T 3luq_A 2 DERLRLFTEHAPAALAMFDREMRYLAVSRRWREDYGLGDGDILGMSHYDIFP-EIGE-EWKSVHRRGLAGEVIRVEEDCF 79 (114)
T ss_dssp CHHHHHHHHTCSSEEEEEETTCBEEEECHHHHHHTTCCSSCCTTCBHHHHCT-TCCH-HHHHHHHHHHTTCCEEEEEEEE
T ss_pred hHHHHHHHhcCCceEEEEcCCcEEEEECHHHHHHHCCCHHHHcCCcHHHHCC-ccHH-HHHHHHHHHhcCCcceeeeeEE
Confidence 3679999999999999999999999999999999999999999999999884 3322 233344444455554444 477
Q ss_pred EcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehh
Q 003978 208 KTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSR 242 (782)
Q Consensus 208 ~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDIT 242 (782)
.+++|..+|+.++..|+++.+|.+.|++++++|||
T Consensus 80 ~~~~g~~~~~~~~~~p~~~~~g~~~~~~~~~~DIT 114 (114)
T 3luq_A 80 VRADGRTQWLRWEVRPWYEGEGRVGGVVIFTEDIT 114 (114)
T ss_dssp EC--CCEEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EcCCCcEEEEEEEEEEeECCCCCEEEEEEEEeeCC
Confidence 89999999999999999999999999999999997
No 277
>3mxq_A Sensor protein; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.78A {Vibrio cholerae o1 biovar el tor}
Probab=99.57 E-value=5.3e-15 Score=142.32 Aligned_cols=117 Identities=15% Similarity=0.140 Sum_probs=93.3
Q ss_pred HHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEE-----
Q 003978 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQ----- 204 (782)
Q Consensus 130 ~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e----- 204 (782)
..++.||+++++||+++|.+|+|++||+++++++|++.++++|+++.++++. ........+..++..|.+....
T Consensus 22 ~~l~~il~~~~~gi~v~D~~g~I~~~N~a~~~~~G~~~~eviG~~~~~~~p~-~~~~~~~~l~~vl~~G~~~~~~~~~~~ 100 (152)
T 3mxq_A 22 LLLSELLDQLSFALCIVRNDYVIVKVNEYFESRVIFDGETMQGKNILELFPE-SADYLKRKIDTALVIESSSFSSWEQKP 100 (152)
T ss_dssp HHHHHHHHHHCCEEEEEETTSBEEEECHHHHHTSSSCHHHHTTSBHHHHSGG-GHHHHHHHHHHHHHHTSCEEEECCSSS
T ss_pred HHHHHHHhcCCCCEEEEcCCCEEEEECHHHHHHHCcCHHHHCCCCHHHhcCC-hHHHHHHHHHHHHhcCCceeeeccccc
Confidence 3578999999999999999999999999999999999999999999999987 4333444678888888763321
Q ss_pred ----EEE---EcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHH
Q 003978 205 ----FPA---KTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQET 247 (782)
Q Consensus 205 ----~~~---~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~ 247 (782)
+.. ..++|..++..+++.|++|.+|++.|++.+++|||+++.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~ti~Pl~d~~G~v~gv~~ii~DVTe~~~a 150 (152)
T 3mxq_A 101 HLLPFKSSRPVSGEEEQMYQNLEVIPIHSEDGTIEHVCLCVYDVTIQASQ 150 (152)
T ss_dssp CSSCC----------CCEEEEEEEEEEECTTSCEEEEEEEEEEEECC---
T ss_pred ccccccccCCCCCCCcEEEEEEEEEEEECCCCCEEEEEEEEEECCHHHhc
Confidence 111 2356778889999999999999999999999999998764
No 278
>3kx0_X Uncharacterized protein RV1364C/MT1410; PAS domain, sensory domain, mycobacteium tuberculos molecule binding domain; 2.30A {Mycobacterium tuberculosis}
Probab=99.56 E-value=1.8e-14 Score=142.08 Aligned_cols=124 Identities=15% Similarity=0.094 Sum_probs=101.7
Q ss_pred CHHHHHHHHHHcCceeEEEc-CCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEE
Q 003978 128 TDRQYLNILQSMGQSVHIFD-LSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFP 206 (782)
Q Consensus 128 ~~~~~~~ile~~~d~I~v~D-~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~ 206 (782)
..+.|+.++++++++|+++| .+|+|+|+|++|++++||+ +++|+++.+++++.........+..++..|+....+..
T Consensus 35 ~~~~l~~l~~~~~~~i~~~d~~~g~i~~~N~a~~~l~G~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 112 (185)
T 3kx0_X 35 AAEDVRRIFEHIPAILVGLEGPDHRFVAVNAAYRGFSPLL--DTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQSGSEW 112 (185)
T ss_dssp CHHHHHHHHHHCSSEEEEEETTTTEEEEECHHHHHHCCCC--SCTTSBHHHHCTTSCSSSSHHHHHHHHHHCCCEEEEEE
T ss_pred hHHHHHHHHhcCCceEEEEECCCcEEEEEcHHHHHHcCCc--cccCCcHHHHCCchhhhhHHHHHHHHHHcCCcccccce
Confidence 35789999999999999999 9999999999999999999 99999999999876655455567788888888655433
Q ss_pred EE---cCC--CCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHH
Q 003978 207 AK---TKT--EERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWD 253 (782)
Q Consensus 207 ~~---~kd--G~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~ 253 (782)
.+ +++ |..+|+.++..|+++.+|.+.|++++++|||++|++|+++..
T Consensus 113 ~~~~~~~~~gg~~~~~~~~~~pi~~~~g~~~g~~~~~~DITerk~~e~~~~~ 164 (185)
T 3kx0_X 113 RLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQAAEA 164 (185)
T ss_dssp EEC--------CCEEEEEEEEEEECTTSCEEEEEEEEEECHHHHTTCC----
T ss_pred eEEeeccCCCCccEEEEEEEEEEECCCCCEEEEEEEEEeCCHHHHHHHHHHH
Confidence 22 222 778999999999999999999999999999999999888433
No 279
>2wkq_A NPH1-1, RAS-related C3 botulinum toxin substrate 1; transferase, cell adhesion, nucleotide-binding, protein engineering, RAS superfamily LOV2; HET: GTP FMN; 1.60A {Avena sativa} PDB: 2wkr_A* 2wkp_A*
Probab=99.55 E-value=1.8e-14 Score=155.50 Aligned_cols=117 Identities=24% Similarity=0.209 Sum_probs=108.0
Q ss_pred HHHHcCceeEEEcC---CCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEcCC
Q 003978 135 ILQSMGQSVHIFDL---SDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKT 211 (782)
Q Consensus 135 ile~~~d~I~v~D~---dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kd 211 (782)
++++++++|+++|. +|+|+|+|++|++|+||+++|++|+++.+++++.........+...+..+..+..+.+.+++|
T Consensus 16 ~~~~~~~~i~~~D~~~~~g~i~~~N~a~~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~d 95 (332)
T 2wkq_A 16 TLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYSREEILGRNARFLQGPETDRATVRKIRDAIDNQTEVTVQLINYTKS 95 (332)
T ss_dssp CGGGCCSEEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHTTCCEEEEEEEECTT
T ss_pred HhhcCCCcEEEecCCCCCCCEEEeehHHHHHhCCCHHHHcCCCchhhcCCCCCHHHHHHHHHHHHcCCeeEEEEEEEcCC
Confidence 47899999999999 999999999999999999999999999999887766556667888999999999999999999
Q ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHH
Q 003978 212 EERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAAL 251 (782)
Q Consensus 212 G~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L 251 (782)
|..+|+.+++.|++|.+|++.|++++++|||+++++++++
T Consensus 96 G~~~~~~~~~~pi~d~~g~~~~~v~~~~DITe~k~~e~~~ 135 (332)
T 2wkq_A 96 GKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVRDAAER 135 (332)
T ss_dssp CCEEEEEEEEEEEECTTSCEEEEEEEEEEESSCCCHHHHH
T ss_pred CCEEEEeeEEEEeEcCCCCEEEEEEEeccCchhhhhhhhc
Confidence 9999999999999999999999999999999998887665
No 280
>1d06_A Nitrogen fixation regulatory protein FIXL; oxygen sensor, histidine kinase, PAS, high-resolution, two-C system, signaling protein; HET: HEM; 1.40A {Sinorhizobium meliloti} SCOP: d.110.3.2 PDB: 1ew0_A*
Probab=99.54 E-value=3.8e-14 Score=130.60 Aligned_cols=110 Identities=15% Similarity=0.162 Sum_probs=88.8
Q ss_pred HHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCe----EEEEEE
Q 003978 131 QYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGER----WTGQFP 206 (782)
Q Consensus 131 ~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~----~~~e~~ 206 (782)
.|+.++++++++|+++|.+|+|+++|++|++|+||+.+|++|+++..++++.........+...+..+.. ...++.
T Consensus 17 ~~~~l~~~~~d~i~~~d~~g~i~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 96 (130)
T 1d06_A 17 HLRSILDTVPDATVVSATDGTIVSFNAAAVRQFGYAEEEVIGQNLRILMPEPYRHEHDGYLQRYMATGEKRIIGIDRVVS 96 (130)
T ss_dssp CHHHHHTTCSSEEEEEETTSBEEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHHHHHHHCCCSSTTSCEEEE
T ss_pred HHHHHHhhCcCeEEEECCCCeEEEEcHHHHHHHCCCHHHHcCCcHHHHCCchhHHHHHHHHHHHHhcCCccccCCeeEEE
Confidence 4889999999999999999999999999999999999999999999988765532222333444444443 234677
Q ss_pred EEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehh
Q 003978 207 AKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSR 242 (782)
Q Consensus 207 ~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDIT 242 (782)
.+++||+.+|+.+++.|+.+.+ ..+++++++|||
T Consensus 97 ~~~kdG~~~~~~~~~~~~~~~~--~~~~~~~~~DIT 130 (130)
T 1d06_A 97 GQRKDGSTFPMKLAVGEMRSGG--ERFFTGFIRDLT 130 (130)
T ss_dssp EECTTSCEEEEEEEEEEEEETT--EEEEEEEEEECC
T ss_pred EEeCCCCEEEEEEEEEEEEECC--eEEEEEEEEECc
Confidence 8899999999999999998633 356889999997
No 281
>3vol_A Aerotaxis transducer AER2; heme, oxygen sensor protein, PAS, HAMP, cyanoMet, CN-bound, protein; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=99.53 E-value=3.9e-14 Score=146.05 Aligned_cols=129 Identities=13% Similarity=0.142 Sum_probs=98.8
Q ss_pred CCCccCcCHHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHh------------CCChhhHcCCCccccccccccccHH
Q 003978 121 GPSAFNFTDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLY------------GYSAEEALGQDAIELLTDGRDFDVA 188 (782)
Q Consensus 121 ~~~a~~l~~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~------------Gys~eEliG~~~~~l~~~~~~~~~~ 188 (782)
|-.+.....++++.+|++++++|+++|.+|+|+|+|++|++|+ ||+.++++|+++.++++... ..
T Consensus 13 ~~~~~~~e~~~l~~iLd~~~~~vii~D~~g~I~~~N~a~~~ll~~~~~~~~~~l~G~~~~eliG~~~~~~~~~~~---~~ 89 (233)
T 3vol_A 13 GLVPRGSHMARIKSALDNVSANVMIADNDLNIIYMNRTVSEMLGRAEADIRKQLPNFDAGRLMGANIDVFHKNPA---HQ 89 (233)
T ss_dssp -----CTHHHHHHHHHTTSSSEEEEEETTSBEEEECHHHHHHHHHTHHHHHTTCTTCCTTSCTTCBGGGGSSSHH---HH
T ss_pred cCCchHHHHHHHHHHHhcCCCcEEEECCCCcEEEecHHHHHHHHHHHHHHHhhcCCCCHHHHcCCCHHHHcCCHH---HH
Confidence 3334444557799999999999999999999999999999999 89999999999998876422 12
Q ss_pred HHHHHHHHcCCeEEEEEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHhhcccc
Q 003978 189 YDIVHRIKMGERWTGQFPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDT 259 (782)
Q Consensus 189 ~~l~~~l~~g~~~~~e~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~ 259 (782)
..++..+. ..+..++. .+| .|+.++++|++|.+|++.|++++++|||+++++|++++.......
T Consensus 90 ~~~~~~~~--~~~~~~~~---~~g--~~~~~~~~Pi~d~~G~~~g~v~~~~DITe~~~~e~ei~~l~~a~~ 153 (233)
T 3vol_A 90 RHLLANLT--GVHKAELN---LGG--RRFSLDVVPVFNDANERLGSAVQWTDRTEEHRAEQEVSQLVQAAA 153 (233)
T ss_dssp HHHHHTCC--SCEEEEEE---ETT--EEEEEEEEEEECTTCCEEEEEEEEEECHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcc--cceeEEEE---ECC--EEEEEEEEEEECCCCCEEEEEEEEehhhHHHHHHHHHHHHHHHHh
Confidence 22333322 23444433 355 367899999999999999999999999999999999987766533
No 282
>2v0u_A NPH1-1, LOV2; kinase, transferase, ATP-binding, serine/threonine-protein kinase, light-induced signal trans phototropin1, nucleotide-binding; HET: FMN; 1.40A {Avena sativa} PDB: 2v0w_A* 2v1b_A* 2v1a_A* 1jnu_A* 1g28_A*
Probab=99.52 E-value=5.9e-14 Score=128.32 Aligned_cols=116 Identities=22% Similarity=0.205 Sum_probs=105.2
Q ss_pred HHHHHHHcCceeEEEcC---CCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEE
Q 003978 132 YLNILQSMGQSVHIFDL---SDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAK 208 (782)
Q Consensus 132 ~~~ile~~~d~I~v~D~---dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~ 208 (782)
++.++++++++|+++|. +|.|+++|+++++++||+.++++|+++..++++.........+...+..+..+..++...
T Consensus 4 l~~~~~~~~~~i~~~d~~~~~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (146)
T 2v0u_A 4 LATTLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYSREEILGRNCRFLQGPETDRATVRKIRDAIDNQTEVTVQLINY 83 (146)
T ss_dssp CCCTGGGSSSCEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred HHHHHhcCCCcEEEEcCCCCCceEEEEcHHHHHHHCcCHHHHcCCCHHHhcCCcCChHHHHHHHHHHhcCCCcceEEEEE
Confidence 45678999999999999 999999999999999999999999999988877765555566788888899888899999
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHH
Q 003978 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQET 247 (782)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~ 247 (782)
+++|..+|+.++..|+.+.+|.+.+++++++|||++++.
T Consensus 84 ~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~~ 122 (146)
T 2v0u_A 84 TKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVRD 122 (146)
T ss_dssp CTTCCEEEEEEEEEEEECTTSCEEEEEEEEEEESSCCCH
T ss_pred ecCCcEEEEEEEEEEeECCCCCEEEEEEEEeechHHHHH
Confidence 999999999999999999999999999999999999873
No 283
>3ewk_A Sensor protein; PAS domain, alpha/beta fold, kinase, phosphoprotein, transfe flavoprotein; HET: FAD; 2.34A {Methylococcus capsulatus}
Probab=99.50 E-value=1.5e-13 Score=140.07 Aligned_cols=111 Identities=23% Similarity=0.336 Sum_probs=102.7
Q ss_pred HHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEc
Q 003978 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKT 209 (782)
Q Consensus 130 ~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~ 209 (782)
+.++.++++++++|+++|.+|+|+|+|++|++++||+.+|++|+++..+.++.........+++++..+..+..++..++
T Consensus 111 ~~~~~~~~~~~~~i~~~d~~g~i~~~N~~~~~~~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 190 (227)
T 3ewk_A 111 ARLKQAMDANSEMILLTDRAGRIIYANPALCRFSGMAEGELLGQSPSILDSPLADQETLAAMQEALQAGQPWSGRLLNRR 190 (227)
T ss_dssp HHHHHHHHTCCSEEEEECTTSCEEEECHHHHHHHTCCTHHHHSSCGGGGBCTTSCHHHHHHHHHHHHHTCCEECCEEEEE
T ss_pred HHHHHHHhcCcCeEEEEcCCCcEEEEchHHHHHhCCCHHHHcCCChhhccCCCCCHHHHHHHHHHHHcCCceeEEEEEEC
Confidence 45778899999999999999999999999999999999999999999988877766666778999999999999999999
Q ss_pred CCCC------EEEEEEEEEEEECCCCCEEEEEEEEEe
Q 003978 210 KTEE------RVLVVATNTPFYDDDGTLVGIVCVSTD 240 (782)
Q Consensus 210 kdG~------~~~v~~~~~Pi~d~~G~v~g~v~i~rD 240 (782)
++|. .+|+.+++.|++|.+|++++++++++|
T Consensus 191 k~G~~~~dg~~~~~~~~~~pi~d~~g~~~~~v~i~~D 227 (227)
T 3ewk_A 191 RTGPAPHDAEDYWAEISTTPIHTDGNGLVGYVQIQHD 227 (227)
T ss_dssp ECCSSSSCEEEEEEEEEEEEEECSSSCEEEEEEEEEC
T ss_pred CCCCcCcccceEEEEEEEEEEECCCCCEEEEEEEecC
Confidence 9997 899999999999999999999999987
No 284
>3h9w_A Diguanylate cyclase with PAS/PAC sensor; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.90A {Marinobacter aquaeolei}
Probab=99.49 E-value=7.8e-14 Score=125.29 Aligned_cols=111 Identities=12% Similarity=0.048 Sum_probs=95.0
Q ss_pred cCceeEEEc-CCCcEEEecHHHHHHhCCChhhHcCCC-ccccccccccccHHHHHHHHHHcCCeEEEEEEEEcCCCCEEE
Q 003978 139 MGQSVHIFD-LSDRIIYWNRSAELLYGYSAEEALGQD-AIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTEERVL 216 (782)
Q Consensus 139 ~~d~I~v~D-~dG~Ii~vN~aae~l~Gys~eEliG~~-~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~~ 216 (782)
++++|+.+| .+|+++|+|+++++|+||+.++++|.. +..+++|++.......+..++..+..+..+++++++||..+|
T Consensus 2 a~~giw~~d~~~~~~~~~n~~~~~l~G~~~~e~~~~~~~~~~ihpdd~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~~~w 81 (115)
T 3h9w_A 2 TKAIPWKINWQTMAFEYIGPQIEALLGWPQGSWKSVEDWATRMHPEDQEWVVNFCVKQSECGVDHEADYRALHRDGHYVW 81 (115)
T ss_dssp -CCEEEEEETTTTEEEEECTHHHHHHCSCGGGCCBHHHHHHSBCHHHHHHHHHHHHHHHHTTCCEEEEEEEECTTSCEEE
T ss_pred cceEEEEEEcCCCcEEEEChhHHHHhCCChHHccCHHHHHHhcCHHHHHHHHHHHHHHHhcCCcccEEEEEEcCCCCEEE
Confidence 467899999 679999999999999999999999842 345777777655556677788888888999999999999999
Q ss_pred EEEEEEEEECCCCCEEEEEEEEEehhHHHHHHH
Q 003978 217 VVATNTPFYDDDGTLVGIVCVSTDSRPFQETRA 249 (782)
Q Consensus 217 v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~ 249 (782)
+.+...|++|.+|++++++++..|||++|++|+
T Consensus 82 ~~~~~~~~~d~~G~~~~~~G~~~Dit~~k~~~~ 114 (115)
T 3h9w_A 82 IRDVVHVVRDDSGEVEALIGFMFDISLEHHHHH 114 (115)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEECGGGGC---
T ss_pred EEEEEEEEECCCCCEEEEEEEEeccCccccccc
Confidence 999999999999999999999999999998875
No 285
>3mjq_A Uncharacterized protein; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium; 2.60A {Desulfitobacterium hafniense}
Probab=99.48 E-value=8.5e-14 Score=125.48 Aligned_cols=120 Identities=12% Similarity=0.098 Sum_probs=87.7
Q ss_pred HHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEcCCC
Q 003978 133 LNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTE 212 (782)
Q Consensus 133 ~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG 212 (782)
+.++++++++|+++|.+|+|+++|+++++++||+.++++|+++.+++++.........+...+..+. ...++...+++|
T Consensus 2 ~~l~~~~~~~i~~~d~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g 80 (126)
T 3mjq_A 2 KNFLETIEDMILIINREGRLLYANTAVPKKLGYTHEELMSMHILTITSAGKMAEGEKILAELFAGKK-ESLPLSLEKKEG 80 (126)
T ss_dssp CTTGGGCSSEEEEEETTSBEEEECTHHHHHHSCCHHHHHHSBHHHHHCTTCHHHHHHHHHHHHHTCC-SEEEEEEECTTS
T ss_pred hhHHhhCCceEEEEeCCCcEEEEcHHHHHHHCCCHHHHcCCCHHHHcCchhHHHHHHHHHHHHhCCC-ceeEEEEEccCC
Confidence 4578999999999999999999999999999999999999999999876654333333444444444 467788889999
Q ss_pred CEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHhh
Q 003978 213 ERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTK 255 (782)
Q Consensus 213 ~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~ 255 (782)
..+|+.++..|+... ...+++++++|||+++++++++....
T Consensus 81 ~~~~~~~~~~~~~~~--~~~~~~~~~~DITe~k~a~~~~~~~~ 121 (126)
T 3mjq_A 81 TSIPAKARIWQGKWH--NEPCLFAIIKDLSKEERASSPPFLEH 121 (126)
T ss_dssp CEEEEEEEEEEEESS--SSEEEEEEEEECC-------------
T ss_pred CEEEEEEEEEeeeEC--CceEEEEEEEechHHHHhhcccchhh
Confidence 999999999987653 35689999999999999988876543
No 286
>3olo_A Two-component sensor histidine kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, TRA; 2.09A {Nostoc SP}
Probab=99.48 E-value=4.9e-13 Score=119.15 Aligned_cols=107 Identities=13% Similarity=0.069 Sum_probs=89.9
Q ss_pred HHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEE
Q 003978 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAK 208 (782)
Q Consensus 129 ~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~ 208 (782)
.+.++.++++++++|+++|.+|+|+++|+++++++||++++++|+++.++++...... +..+..+..+..+....
T Consensus 12 ~~~~~~~~~~~~~~i~~~d~~g~i~~~N~~~~~l~G~~~~el~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~e~~~~ 86 (118)
T 3olo_A 12 FKFAHYLINNAVEASFCLGDNWQFLYVNDATCRMTEYSREQLLSMNLQDIDVDFALHD-----WEEIRQKNNYTFKTRYR 86 (118)
T ss_dssp HHHHHHHHHHCSSEEEEECTTSBEEEECHHHHHHHCCCHHHHTTCBGGGTBTTGGGSC-----HHHHHHHSEEEEEEEEE
T ss_pred HHHHHHHHhcCCceEEEECCCCcEEEEHHHHHHHHCCCHHHHhCCChhhcccccCHHH-----HHHHHhcCcEEEEEEEE
Confidence 3567889999999999999999999999999999999999999999999886544322 44455667788888999
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehh
Q 003978 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSR 242 (782)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDIT 242 (782)
+++|..+|+.++..|+.+.+ ..+++++++|||
T Consensus 87 ~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~DIT 118 (118)
T 3olo_A 87 SQSGRIFLVEMSLTFLEDQE--RRFSCVFVREKS 118 (118)
T ss_dssp CTTCCEEEEEEEEEEEEETT--EEEEEEEEEEC-
T ss_pred ccCCCEEEEEEEEEEEEECC--ccEEEEEEEeCC
Confidence 99999999999999997643 346789999997
No 287
>3icy_A Sensor protein; sensory box histidine kinase/response regulator domain, kinase, chlorobium tepidum TLS, PSI-2; 2.68A {Chlorobaculum tepidum}
Probab=99.47 E-value=1.1e-13 Score=123.53 Aligned_cols=115 Identities=11% Similarity=0.119 Sum_probs=102.9
Q ss_pred CHHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCc--cccccccccccHHHHHHHHHHcCCeEEEEE
Q 003978 128 TDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDA--IELLTDGRDFDVAYDIVHRIKMGERWTGQF 205 (782)
Q Consensus 128 ~~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~--~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~ 205 (782)
+++.|+.++++++++|+.+|.+|.++++|+++++++||+.+++++... ..++++++.......+...+..+..+..++
T Consensus 2 s~~~~~~l~~~~~~~i~~~d~~~~~~~~n~~~~~~~G~~~~~~~~~~~~~~~~i~p~d~~~~~~~~~~~~~~~~~~~~e~ 81 (118)
T 3icy_A 2 NAEELQALVDNIPAAIYHLDVSGQATIRFRPPAFLKTLVSEHAGTTRLNTLSMIHHDDRHMLSNAYSKLREAKHSLTLVY 81 (118)
T ss_dssp HHHHHHHHHTTCCCCCEEECTTSCEEECCCCCGGGGGGEEEETTEEEEGGGGGBCGGGHHHHHHHHHHHHHSCCEEEEEE
T ss_pred cHHHHHHHHhcCCceEEEEEcCCCceEEechhHhhcCCCHHHccCChhHHHHHcCHHHHHHHHHHHHHHHhcCCCceEEE
Confidence 357899999999999999999999999999999999999999988754 567777776555556677778888889999
Q ss_pred EEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehh
Q 003978 206 PAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSR 242 (782)
Q Consensus 206 ~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDIT 242 (782)
++.+++|..+|+.....|+++.+|.+++++++++|||
T Consensus 82 r~~~~~g~~~w~~~~~~~~~~~~g~~~~~~g~~~DIT 118 (118)
T 3icy_A 82 RIVTPEGKLHWIEDHMRSSFSDDGLFSGIDGILCEVT 118 (118)
T ss_dssp EEECTTCCEEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 9999999999999999999999999999999999997
No 288
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=99.46 E-value=9.9e-14 Score=133.27 Aligned_cols=122 Identities=18% Similarity=0.258 Sum_probs=100.6
Q ss_pred cCHHHHHHHHHHcCceeEEEcCCCcEEEecHH---HHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEE
Q 003978 127 FTDRQYLNILQSMGQSVHIFDLSDRIIYWNRS---AELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTG 203 (782)
Q Consensus 127 l~~~~~~~ile~~~d~I~v~D~dG~Ii~vN~a---ae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~ 203 (782)
++.+.+..||++++++|+++|.+|+|+|+|++ +++++| ..++++|+++.+++++.. ....+.+..++++|+....
T Consensus 16 l~~~~l~~IL~~~~~gI~~vD~~g~I~~~N~a~~~~~~i~g-~~~~~iGr~v~~~~~~~~-~~~v~~i~~~l~~g~~~~~ 93 (151)
T 2qkp_A 16 LSVEQANLILNHLPLEITFVNKDDIFQYYNDSVPAAEMVFK-RTPSQVGRNVELCHPPKV-LDKVKKVFELLRNGQRDKV 93 (151)
T ss_dssp ECHHHHHHHHHHSSSEEEEEETTSBEEEECCCSCGGGCSSC-CCGGGTTSBGGGSSCHHH-HHHHHHHHHHHHTTSBSEE
T ss_pred ecHHHHHHHHHhCCCceEEEcCCCeEEEEeCCCchhhhhcC-CCHHHcCCCHHHhCCHHH-HHHHHHHHHHHHcCCccEE
Confidence 56688999999999999999999999999999 999999 567899999999876443 3345678888999988766
Q ss_pred EEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHH
Q 003978 204 QFPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAAL 251 (782)
Q Consensus 204 e~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L 251 (782)
++.....+ ...++.++..||+|++|+++|++.+++|||+.++++++.
T Consensus 94 ~~~~~~~~-~~~~v~v~~~Pi~d~~G~~~G~vev~~Dit~l~~le~~r 140 (151)
T 2qkp_A 94 NMWFQSER-LGKFVYVTYAAVRDQAGDFQGVLEYVQDIKPFFELDSEF 140 (151)
T ss_dssp EEEEEETT-TTEEEEEEEEEEECTTCCEEEEEEEEEECGGGGGGGGC-
T ss_pred EEEEecCC-CCeEEEEEEEEEECCCCCEEEEEEEEEECHHHHhhhhhh
Confidence 66654332 124678899999999999999999999999998776653
No 289
>3mfx_A Sensory BOX/ggdef family protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Shewanella oneidensis}
Probab=99.44 E-value=5e-13 Score=124.74 Aligned_cols=112 Identities=13% Similarity=0.073 Sum_probs=84.6
Q ss_pred HHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCC-------eEE
Q 003978 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGE-------RWT 202 (782)
Q Consensus 130 ~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~-------~~~ 202 (782)
+.++.++++++++|+++|.+|+|+++|++|++|+||+.++++|+++.+++++.........+......+. ...
T Consensus 7 ~~l~~i~~~~~d~i~~~D~~g~I~~~N~aa~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (129)
T 3mfx_A 7 ETIELFIQHLTEAMILVNANGFIRSCNQRSAELLDCPQVSLKGQDWRNFLTEHHQARYDNLLSHDVQLGTNCGQPVQHPA 86 (129)
T ss_dssp HHHHHHHTTCSSEEEEEETTSBEEEECHHHHHHTTSCHHHHTTSBGGGGBCTTCCGGGGCTTC----------CCSCEEE
T ss_pred HHHHHHHhcCCceEEEECCCCEEEeEhHHHHHHHCcCHHHHcCCcHHHHcChHhHHHHHHHHHHHHhcCcccccccCCCc
Confidence 5688999999999999999999999999999999999999999999999987654221111111112221 245
Q ss_pred EEEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHH
Q 003978 203 GQFPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPF 244 (782)
Q Consensus 203 ~e~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITer 244 (782)
.++.++++||+.+|+.++++|+.+ ++. -++++++|+...
T Consensus 87 ~E~~~~rkdG~~~~velsis~i~~-~~~--~~v~~~~~~~~~ 125 (129)
T 3mfx_A 87 QETTLICASGKAKDVELSISYIPG-HEP--MFVMVMHDLEHH 125 (129)
T ss_dssp EEEEEECTTSCEEEEEEEEEEECS-SSC--EEEEEEEEC---
T ss_pred eEEEEEcCCCCEEEEEEEEEEecC-CCc--EEEEEEechhhh
Confidence 788899999999999999999983 322 278889998643
No 290
>2l0w_A Potassium voltage-gated channel, subfamily H (EAG member 2, isoform CRA_B; HERG, PAS domain, voltage-gated potassium channel, membrane; NMR {Homo sapiens} PDB: 2l1m_A 2l4r_A
Probab=99.43 E-value=1.1e-12 Score=118.85 Aligned_cols=113 Identities=16% Similarity=0.135 Sum_probs=95.0
Q ss_pred HHHHHHHcCceeEEEcC---CCcEEEecHHHHHHhCCChhhHcCCC--ccccccccccccHHHHHHHHHHcCCeEEEEEE
Q 003978 132 YLNILQSMGQSVHIFDL---SDRIIYWNRSAELLYGYSAEEALGQD--AIELLTDGRDFDVAYDIVHRIKMGERWTGQFP 206 (782)
Q Consensus 132 ~~~ile~~~d~I~v~D~---dG~Ii~vN~aae~l~Gys~eEliG~~--~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~ 206 (782)
+...+++++++|+++|. +|+|+|+|+++++++||+.++++|++ +..+.++.........+...+..+..+..+..
T Consensus 21 ~~~~~~~~~~~i~~~d~~~~~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (138)
T 2l0w_A 21 IIRKFEGQSRKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPRTQRRAAAQIAQALLGAEERKVEIA 100 (138)
T ss_dssp HHHHHTTTTSEEEEEESSSTTCBEEEECSHHHHHHSCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHTTCSSCEEEEEE
T ss_pred HHHHHhcCCCCEEEEecCCCCCEEEEeCHHHHHHhCCCHHHHcCCCCcccccCCcccchhHHHHHHHHHhhcCCceeEEE
Confidence 44445559999999999 99999999999999999999999999 45455544433334556777777888888888
Q ss_pred EEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHH
Q 003978 207 AKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPF 244 (782)
Q Consensus 207 ~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITer 244 (782)
..+++|..+|+.+++.|+.+.+|.+.+++++++|||++
T Consensus 101 ~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~ 138 (138)
T 2l0w_A 101 FYRKDGSCFLCLVDVVPVKNEDGAVIMFILNFEVVMEK 138 (138)
T ss_dssp EECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEC
T ss_pred EECCCCCEEEEEEEEEEEeCCCCCEEEEEEEEEeccCC
Confidence 89999999999999999999999999999999999863
No 291
>3eeh_A Putative light and redox sensing histidine kinase; structural genomic MCSG, protein structure initiative, midwest center for STRU genomics; HET: PG5; 1.95A {Haloarcula marismortui}
Probab=99.43 E-value=5.4e-13 Score=118.62 Aligned_cols=114 Identities=14% Similarity=0.163 Sum_probs=97.8
Q ss_pred CHHHHHHHHHHcCceeEEEcCC-CcEEEecHHHHHHhCCChhhHcCCC--ccccccccccccHHHHHHHHHHcCCeEEEE
Q 003978 128 TDRQYLNILQSMGQSVHIFDLS-DRIIYWNRSAELLYGYSAEEALGQD--AIELLTDGRDFDVAYDIVHRIKMGERWTGQ 204 (782)
Q Consensus 128 ~~~~~~~ile~~~d~I~v~D~d-G~Ii~vN~aae~l~Gys~eEliG~~--~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e 204 (782)
.++.|+.++++++++|+++|.+ |.|+++|+++++++||+.++++|+. +..+++++.... ....+..+..+..+..+
T Consensus 9 ~~~~~~~~~~~~~~~i~~~d~~~~~i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~e 87 (125)
T 3eeh_A 9 SERRVRELTEATNDILWEFTADLSEVLVINSAYEDIWGRSVAKLRENPHDFLNGIHPEDREL-MKDTMQSLMDGESADVE 87 (125)
T ss_dssp -CHHHHHHHSCCCCEEEEEETTSSCEEEECTHHHHHHSSCHHHHHHCGGGGGGGBCHHHHHH-HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHhcCCceEEEEEcCCCcEEEecHHHHHHHCCCHHHHccCcHHHHHhcCHHHHHH-HHHHHHHHHcCCCccEE
Confidence 4478999999999999999999 9999999999999999999999988 556666655332 23334446778888889
Q ss_pred EEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehh
Q 003978 205 FPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSR 242 (782)
Q Consensus 205 ~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDIT 242 (782)
+++.+++|..+|+.++..|+.+.+|.+.+++++++|||
T Consensus 88 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIT 125 (125)
T 3eeh_A 88 CRVNATEEYQRWVWIQGEPITNDAGETVRVAGFARDIT 125 (125)
T ss_dssp EEECGGGTTCEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EEEEcCCCCEEEEEEecEEEECCCCCEEEEEEEEEecC
Confidence 99999999999999999999999999999999999997
No 292
>1byw_A Protein (human ERG potassium channel); PAS domain, potassium channel domain, membrane protein; 2.60A {Homo sapiens} SCOP: d.110.3.6
Probab=99.42 E-value=1.9e-12 Score=111.85 Aligned_cols=104 Identities=17% Similarity=0.132 Sum_probs=88.2
Q ss_pred ceeEEEcC---CCcEEEecHHHHHHhCCChhhHcCCC--ccccccccccccHHHHHHHHHHcCCeEEEEEEEEcCCCCEE
Q 003978 141 QSVHIFDL---SDRIIYWNRSAELLYGYSAEEALGQD--AIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTEERV 215 (782)
Q Consensus 141 d~I~v~D~---dG~Ii~vN~aae~l~Gys~eEliG~~--~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~ 215 (782)
++|+++|. +|+|+|+|+++++++||+.++++|++ +..+.++.........+...+..+..+..+....+++|..+
T Consensus 2 ~~i~i~d~~~~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 81 (110)
T 1byw_A 2 RKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPCTQRRAAAQIAQALLGAEERKVEIAFYRKDGSCF 81 (110)
T ss_dssp CEEEEEETTSSSCBEEEECHHHHHHHTCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHHHTTCCEEEEEEEECTTSCEE
T ss_pred CCEEEEeccCCCCcEEEECHHHHHHhCCCHHHHccCCCccccccCCcCCHHHHHHHHHHHhcCCCceEEEEEEcCCCCEE
Confidence 58999997 59999999999999999999999998 34444443333334567778888888888888899999999
Q ss_pred EEEEEEEEEECCCCCEEEEEEEEEehhHH
Q 003978 216 LVVATNTPFYDDDGTLVGIVCVSTDSRPF 244 (782)
Q Consensus 216 ~v~~~~~Pi~d~~G~v~g~v~i~rDITer 244 (782)
|+.++..|+.+.+|.+.+++++++|||++
T Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~DiTe~ 110 (110)
T 1byw_A 82 LCLVDVVPVKNEDGAVIMFILNFEVVMEK 110 (110)
T ss_dssp EEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEEEEEEeecCCCCEEEEEEEEEeccCC
Confidence 99999999999999999999999999963
No 293
>1v9y_A Heme PAS sensor protein; signaling protein; HET: HEM; 1.32A {Escherichia coli} SCOP: d.110.3.2 PDB: 1v9z_A* 1vb6_A* 1s67_L* 1s66_L*
Probab=99.42 E-value=5.8e-13 Score=126.19 Aligned_cols=123 Identities=15% Similarity=0.227 Sum_probs=86.6
Q ss_pred HHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCe----EEEEE
Q 003978 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGER----WTGQF 205 (782)
Q Consensus 130 ~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~----~~~e~ 205 (782)
+.|+.++++++++|+++|.+|.|+++|+++++++||+.++++|+++.+++++.........+......+.. +..++
T Consensus 40 ~~~~~~l~~~~~~i~~~d~~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (167)
T 1v9y_A 40 GIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSREL 119 (167)
T ss_dssp CCHHHHHHTCSSEEEEECTTSBEEEECHHHHHHHSCCGGGTTTSBGGGGSCGGGTTTHHHHHHHHHC----------CEE
T ss_pred HHHHHHHHhCCCCEEEECCCCcEEEECHHHHHHhCCCHHHHcCCChhhccCccccchHHHHHHHHhhcCCCcccccceEE
Confidence 45899999999999999999999999999999999999999999999988876544333333444443333 44577
Q ss_pred EEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHh
Q 003978 206 PAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDT 254 (782)
Q Consensus 206 ~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~ 254 (782)
...+++|..+|+.++..|+ +.+|.+ +++++++|||++++++++|+.+
T Consensus 120 ~~~~~~g~~~~~~~~~~~~-~~~g~~-~~~~~~~DiT~~~~~e~~l~~l 166 (167)
T 1v9y_A 120 QLEKKDGSKIWTRFALSKV-SAEGKV-YYLALVRDASVEMAQKEQTRQL 166 (167)
T ss_dssp EEECTTSCEEEEEEEEEEE-EETTEE-EEEEEEEC--------------
T ss_pred EEEcCCCcEEEEEEEEEEE-ecCCCE-EEEEEEecCcHHHHHHHHHHhh
Confidence 7889999999999999999 456666 4899999999999999887653
No 294
>2kdk_A ARYL hydrocarbon receptor nuclear translocator-LI 2; circadian clock, PAS domain, transcription, activator, biolo rhythms, DNA-binding, nucleus; NMR {Homo sapiens}
Probab=99.42 E-value=5.3e-13 Score=120.45 Aligned_cols=110 Identities=18% Similarity=0.215 Sum_probs=92.3
Q ss_pred HHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHc-CCeEEEEEEEEcCCCC
Q 003978 135 ILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKM-GERWTGQFPAKTKTEE 213 (782)
Q Consensus 135 ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~-g~~~~~e~~~~~kdG~ 213 (782)
++++++++|+++|.+|+|+|+|+++++++||+.+|++|+++.+++++++.......+...+.. +.....+++++++||.
T Consensus 8 ~~~~~~~~i~~~d~~g~i~~~N~~~~~~~G~~~~el~g~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~ 87 (121)
T 2kdk_A 8 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAVLQSKEKILTDSYKFRAKDGS 87 (121)
T ss_dssp CCCCSSEEEEEECTTSBEEEECTHHHHHTCCCTTTSBTSBTTTTBCSSSHHHHHHHHHHHHTSSSCEEEEEEEEECSSSC
T ss_pred cccCCccEEEEECCCeeEEEEChhHHHHHCCCHHHHcCCcHHHeeCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCC
Confidence 567789999999999999999999999999999999999999998877654444444555655 3446778899999999
Q ss_pred EEEEEEEEEEEECCC-CCEEEEEEEEEehhHH
Q 003978 214 RVLVVATNTPFYDDD-GTLVGIVCVSTDSRPF 244 (782)
Q Consensus 214 ~~~v~~~~~Pi~d~~-G~v~g~v~i~rDITer 244 (782)
.+|+.++..|++|.+ +.+.+++++.+||++.
T Consensus 88 ~~~~~~~~~~~~d~~~~~~~~~v~~~~~i~~~ 119 (121)
T 2kdk_A 88 FVTLKSQWFSFTNPDTKELEYIVSVNTLVLGH 119 (121)
T ss_dssp EEEEEEEEEEEECCSSSCEEEEEEEEECCSSC
T ss_pred EEEEEEEEEEEECCCCCeeeEEEEEEEecccc
Confidence 999999999999876 5677788999999864
No 295
>3d72_A Vivid PAS protein VVD; circadian, photoreceptor, blue-light, LOV, signaling protein; HET: FAD; 1.65A {Neurospora crassa} PDB: 3is2_A* 2pd8_A* 3hjk_A* 2pdr_A* 2pd7_A* 2pdt_A* 3hji_A* 3rh8_B*
Probab=99.40 E-value=1.4e-12 Score=122.11 Aligned_cols=105 Identities=17% Similarity=0.199 Sum_probs=92.1
Q ss_pred HHHHcCceeEEEc---CCCcEEEecHHHHHHhCCChhhHcCCCccccccccc-----------cccHHHHHHHHHHcCCe
Q 003978 135 ILQSMGQSVHIFD---LSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGR-----------DFDVAYDIVHRIKMGER 200 (782)
Q Consensus 135 ile~~~d~I~v~D---~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~-----------~~~~~~~l~~~l~~g~~ 200 (782)
++++. ++|+++| .+|+|+|+|+++++|+||+.+|++|+++..++++.. .......+...+..+..
T Consensus 31 ~~~~~-~~i~~~d~~d~~g~i~~~N~a~~~l~G~~~~el~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (149)
T 3d72_A 31 PVDTS-VALILCDLKQKDTPIVYASEAFLYMTGYSNAEVLGRNCRFLQSPDGMVKPKSTRKYVDSNTINTMRKAIDRNAE 109 (149)
T ss_dssp SCCTT-SCEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGGSTTSCCCTTCCCSSSCHHHHHHHHHHHHHTCC
T ss_pred hhcCC-ccEEEEeccCCCCcEEEECHHHHHHHCcCHHHHcCCChhHhCCccccccccccccccChHHHHHHHHHHHCCCc
Confidence 34553 8999999 799999999999999999999999999998887663 34445567788888988
Q ss_pred EEEEEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEe
Q 003978 201 WTGQFPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTD 240 (782)
Q Consensus 201 ~~~e~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rD 240 (782)
+..+...+++||..+|+.+++.|+++.+|++.+++++++|
T Consensus 110 ~~~e~~~~~~dG~~~~~~~~~~~i~~~~g~~~~~v~~~~D 149 (149)
T 3d72_A 110 VQVEVVNFKKNGQRFVNFLTMIPVRDETGEYRYSMGFQCE 149 (149)
T ss_dssp EEEEEEEECTTCCEEEEEEEEEEEECTTSSEEEEEEECCC
T ss_pred eEEEEEEECCCCCEEEEEEEEEEEEcCCCCEEEEEEEEeC
Confidence 9899999999999999999999999999999999999877
No 296
>4hi4_A Aerotaxis transducer AER2; PAS domain, diatomic GAS sensor, signaling protein; HET: HEM GOL; 2.30A {Pseudomonas aeruginosa}
Probab=99.38 E-value=1.9e-12 Score=118.25 Aligned_cols=105 Identities=16% Similarity=0.220 Sum_probs=80.9
Q ss_pred HHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhC------------CChhhHcCCCccccccccccccHHHHHHHHHHc
Q 003978 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYG------------YSAEEALGQDAIELLTDGRDFDVAYDIVHRIKM 197 (782)
Q Consensus 130 ~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~G------------ys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~ 197 (782)
.+++.+|++++++|+++|.+|+|+|+|++|++|+| |+.++++|+++.++++... ....++..+.
T Consensus 5 ~rl~~il~~~~~gviv~D~~g~I~~~N~a~~~llg~~~~~i~~~~~g~~~~~~~G~~~~~~~~~~~---~~~~~~~~~~- 80 (121)
T 4hi4_A 5 ARIASALDNVSANVMIADNDLNIIYMNRTVSEMLGRAEADIRKQLPNFDAGRLMGANIDVFHKNPA---HQRHLLANLT- 80 (121)
T ss_dssp HHHHHHHTTSSSEEEEEETTCBEEEECHHHHHHHHHTHHHHHHHCTTCCGGGCTTCBGGGGCSSHH---HHHHHHHHCS-
T ss_pred HHHHHHHhcCCccEEEEcCCCeEEEecHHHHHHHHHHHHHHHHhcCCCChHHhcCCCHHHhcCCHH---HHHHHHhCcC-
Confidence 56899999999999999999999999999999996 8999999999998875321 1222333222
Q ss_pred CCeEEEEEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHH
Q 003978 198 GERWTGQFPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPF 244 (782)
Q Consensus 198 g~~~~~e~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITer 244 (782)
..+..++. .+|. ++.++++|++|.+|++.|++++++|||+.
T Consensus 81 -~~~~~~~~---~~~~--~~~~~~~pi~~~~g~~~g~v~~~~DiTee 121 (121)
T 4hi4_A 81 -GVHKAELN---LGGR--RFSLDVVPVFNDANARLGSAVQWTDRTEE 121 (121)
T ss_dssp -SCEEEEEE---ETTE--EEEEEEEEEECTTSCEEEEEEEEEECC--
T ss_pred -CCcEEEEE---ECCE--EEEEEEEEEECCCCCEEEEEEEEEEecCC
Confidence 23443333 2453 45789999999999999999999999974
No 297
>3b33_A Sensor protein; structural genomics, PAS domain, nitrogen regulation protein APC91440.4, PSI-2; HET: MSE; 1.83A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.38 E-value=2.5e-12 Score=115.03 Aligned_cols=108 Identities=18% Similarity=0.146 Sum_probs=88.6
Q ss_pred HHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeE-EEEEEEE
Q 003978 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERW-TGQFPAK 208 (782)
Q Consensus 130 ~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~-~~e~~~~ 208 (782)
.....++++++++|+++|.+|+|+|+|++|++++|++.++++|+++.+++++... ....+.+++..+... ..+..+.
T Consensus 7 ~l~~~il~~~~~~i~~~D~~g~I~~~N~aa~~l~g~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 84 (115)
T 3b33_A 7 SLPSAILNNMVTATLILDDGLAIRYANPAAELLFSQSAKRIVEQSLSQLIQHASL--DLALLTQPLQSGQSITDSDVTFV 84 (115)
T ss_dssp CHHHHHHHHCSSEEEEECTTCBEEEECHHHHHHTTSCHHHHTTCBHHHHCSEEEC--CTHHHHHHHHHCCCEEEEEEEEE
T ss_pred ccHHHHHhhcCceEEEECCCCcEEEECHHHHHHhCCCHHHHhCCCHHHHhCccch--hhHHHHHHHHcCCcccCCceEEe
Confidence 4567799999999999999999999999999999999999999999998765432 123355667777664 3455555
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehh
Q 003978 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSR 242 (782)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDIT 242 (782)
++|..+|+.+++.|+.+ +|. .+++.+++||+
T Consensus 85 -~~g~~~~~~~~~~pi~~-~g~-~~~l~~~~Di~ 115 (115)
T 3b33_A 85 -VDGRPLMLEVTVSPITW-QRQ-LMLLVEMRKID 115 (115)
T ss_dssp -ETTEEEEEEEEEEEEEE-TTE-EEEEEEEEEC-
T ss_pred -cCCCEEEEEEEEEEeec-CCc-eEEEEEEEeCC
Confidence 78999999999999998 776 68999999985
No 298
>3bwl_A Sensor protein; structural genomics, APC87707.1, PAS domain, HTR-like protei protein structure initiative; HET: MSE I3A; 1.73A {Haloarcula marismortui atcc 43049}
Probab=99.36 E-value=5.6e-12 Score=114.48 Aligned_cols=109 Identities=13% Similarity=0.109 Sum_probs=82.0
Q ss_pred HHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhH--cCCCccccccccccccHHHHHHHHHHcCCeEEEEEE
Q 003978 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEA--LGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFP 206 (782)
Q Consensus 129 ~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEl--iG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~ 206 (782)
++.|+.++++++++|+++|.+|+|+++|+++++++||+.+|+ +|+++.++++ .. ......+.....+.....+..
T Consensus 16 ~~~~~~l~e~~~~~i~~~d~~g~i~~~N~a~~~~~G~~~~el~g~g~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~e~~ 92 (126)
T 3bwl_A 16 SSRLEALFENSPDMIDVLDADGTICEVNQRFCAELGYDESEVLGRSIWEFDLMF--DA-EDVQTQLSGFSVDERRKFEGL 92 (126)
T ss_dssp HHHHHHHHHHCSSEEEEECTTCBEEEECHHHHHHHTCCGGGTTTSBGGGTBTTC--CH-HHHHHHHHTCCTTCEEEEEEE
T ss_pred HHHHHHHHhhCCcEEEEEcCCCCEEEEcHHHHHHhCCCHHHHhhCCCchhhccC--CH-HHHHHHHHHHhcCCCcceEEE
Confidence 467899999999999999999999999999999999999999 5787777766 21 111111111223344555667
Q ss_pred EEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehh
Q 003978 207 AKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSR 242 (782)
Q Consensus 207 ~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDIT 242 (782)
..++||..+|+.++..++.+ +|.. +++++++|||
T Consensus 93 ~~~~dG~~~~~~~~~~~~~~-~~~~-~~~~~~~DIT 126 (126)
T 3bwl_A 93 YERRDGSTMSVEVHLLRFNL-EGED-RFLAISRDIT 126 (126)
T ss_dssp EECTTSCEEEEEEEEEEEEE-TTEE-EEEEEEEEC-
T ss_pred EEeCCCCEEEEEEEeEEEec-CCcE-EEEEEEEeCC
Confidence 78999999999999888753 4443 5788999997
No 299
>3fc7_A HTR-like protein, sensor protein; APC87712.1, HTR-like protein,haloarcula marismortui ATCC 430 structural genomics, PSI-2; 2.65A {Haloarcula marismortui}
Probab=99.31 E-value=1.3e-12 Score=117.77 Aligned_cols=108 Identities=11% Similarity=0.064 Sum_probs=77.0
Q ss_pred CHHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEE
Q 003978 128 TDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPA 207 (782)
Q Consensus 128 ~~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~ 207 (782)
.++.|+.++++++++|+++|.+|+|+++|++|++++||+.++++|+++.+++++.............+..+...
T Consensus 17 ~~~~~~~i~~~~~~~i~~~d~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 90 (125)
T 3fc7_A 17 TRKKFESLVSDSPDGIVHLTTNGTILSVNPSMAGRLGADPDTLVGQQLSAVMDSEAANQRLEAGKSAVENGTAT------ 90 (125)
T ss_dssp ---------CCSCCEEEEEETTSBEEEECHHHHHHHTSCHHHHTTSBGGGSSCHHHHHHHHHHHHHHHHHTSCE------
T ss_pred HHHHHHHHHhcCCCeEEEEcCCCeEEEECHHHHHHhCCCHHHHcCccHHHhCCHHHHHHHHHHHHHHhcCCCeE------
Confidence 34679999999999999999999999999999999999999999999999884332222222224555666544
Q ss_pred EcCCCC-EEEEEEEEEEEECCCCCEEEEEEEEEehh
Q 003978 208 KTKTEE-RVLVVATNTPFYDDDGTLVGIVCVSTDSR 242 (782)
Q Consensus 208 ~~kdG~-~~~v~~~~~Pi~d~~G~v~g~v~i~rDIT 242 (782)
..++|. .+|+.+++.|+.+. |.+.|++++++|||
T Consensus 91 ~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~DIT 125 (125)
T 3fc7_A 91 RSEDAVGGRHYHNQYIPVDSH-RKSDTFQLVSRDIT 125 (125)
T ss_dssp EEEEEETTEEEEEEEEESSTT-TTTTEEEEEEEECC
T ss_pred EeEcCCCcEEEEEEEEeEecC-CCeEEEEEEEecCC
Confidence 223444 67899999998764 66678999999997
No 300
>3fg8_A Uncharacterized protein RHA05790; PAS domain, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; HET: 3PB; 1.80A {Rhodococcus SP}
Probab=99.30 E-value=1.5e-12 Score=118.10 Aligned_cols=107 Identities=17% Similarity=0.079 Sum_probs=86.4
Q ss_pred HHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEc
Q 003978 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKT 209 (782)
Q Consensus 130 ~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~ 209 (782)
.+.+.++++++++|+++|.+|+|+++|+++++++|++.++++|+++.+++++.........+.+++..++....++....
T Consensus 12 ~~~~~il~~~~~~i~~~D~~g~i~~~N~a~~~l~g~~~~e~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (118)
T 3fg8_A 12 SGRENLYFQGGLGFMALDEDLRIIYVNSGCLRHVRRSRDELLGRVVTEVLPETQGSYFDALCRKVLATGREQQTRVDSLY 91 (118)
T ss_dssp -CCCCSSSCTTCEEEEECTTCBEEEECHHHHHHHTCCHHHHTTSBHHHHCGGGTTSHHHHHHHHHHHHCCCEEEEEECSS
T ss_pred chHHHHHhhCCceEEEECCCCeEEEECHHHHHHhCCCHHHHcCCcHHHHcCccchHHHHHHHHHHHHcCCceEEEEEEEc
Confidence 44677899999999999999999999999999999999999999999998766544445567788888988776443333
Q ss_pred CCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHH
Q 003978 210 KTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPF 244 (782)
Q Consensus 210 kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITer 244 (782)
.+| .|+.+++.|+.+ |++++++|||++
T Consensus 92 ~~g--~~~~~~~~p~~~------g~v~~~~DITer 118 (118)
T 3fg8_A 92 SPG--MTIEVTAAADSG------ALVVHFRDVTAE 118 (118)
T ss_dssp STT--CEEEEEEEEETT------EEEEEEEECSCC
T ss_pred CCC--eEEEEEEEEcCC------cEEEEEEeccCC
Confidence 466 577888889753 378889999974
No 301
>4eho_A Bacteriophytochrome, PAS/PAC sensor; photoreceptor, bacteriopbhytochrome; HET: MSE BLA; 2.90A {Rhodopseudomonas palustris tie-1}
Probab=99.27 E-value=5e-13 Score=157.49 Aligned_cols=116 Identities=16% Similarity=0.200 Sum_probs=105.0
Q ss_pred HHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEcCC
Q 003978 132 YLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKT 211 (782)
Q Consensus 132 ~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kd 211 (782)
+..++++..++|+++|.+|+|+|||++|++|+||+.+|++|++...+.+++. ......+++.+..|+.+.++++++++|
T Consensus 520 ~~~lle~a~~~i~~~D~~grI~~~N~a~~~l~G~s~~e~~g~~~l~~~~~~~-~~~~~~i~~~l~~g~~~~~E~~~~~~d 598 (635)
T 4eho_A 520 ASSQVHASMQPVLITDAEGRILLMNDSFRDMLPAGSPSAVHLDDLAGFFVES-NDFLRNVAELIDHGRGWRGEVLLRGAG 598 (635)
T ss_dssp HHHHHHHCSSCCEEEETTCCEEEECHHHHTTSCSSCCCCCSSGGGTTSSSSC-THHHHHHHHHHHHCCCBCCCCEECCSS
T ss_pred HHHHHHhCCCcEEEECCCCeEeeHHHHHHHHHCcChHHHcCcchhhccCCCC-HHHHHHHHHHHHcCCcEEEEEEEEccC
Confidence 4567899999999999999999999999999999999999999887777665 345567788889999999999999999
Q ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHH
Q 003978 212 EERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETR 248 (782)
Q Consensus 212 G~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E 248 (782)
|+.+|+.+++.|++|.+|+++|++++++|||++|++|
T Consensus 599 G~~~~~~~~~~pv~d~~G~v~g~v~i~~DITerK~aE 635 (635)
T 4eho_A 599 NRPLPLAVRADPVTRTEDQSLGFVLIFSDATDRRTAD 635 (635)
T ss_dssp SSCEECCCCEEEECSTTSSCCEEEECCCCCSSSCCCC
T ss_pred CcEEEEEEEEEEEECCCCCEEEEEEEEEeCchHhhCC
Confidence 9999999999999999999999999999999998754
No 302
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.23 E-value=1.7e-11 Score=127.64 Aligned_cols=142 Identities=15% Similarity=0.026 Sum_probs=110.7
Q ss_pred ccceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCceeEEEe
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLCIVTE 582 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lv~E 582 (782)
...|++...++.|+++.||++...+..+++|+........ ...+.+|+.+++.+. +..++++++++...+..|+|||
T Consensus 13 l~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e 90 (263)
T 3tm0_A 13 IEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGT--TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMS 90 (263)
T ss_dssp HTTSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTS--TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred hccceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCC--HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEE
Confidence 3578899999999999999998888899999987532111 135778999999884 6778899999988888999999
Q ss_pred ecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCC---------------------------------------
Q 003978 583 FLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCN--------------------------------------- 623 (782)
Q Consensus 583 ~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~--------------------------------------- 623 (782)
|++|.+|.+.+.. ......++.+++.+|..||+..
T Consensus 91 ~i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (263)
T 3tm0_A 91 EADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPF 164 (263)
T ss_dssp CCSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSS
T ss_pred ecCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccC
Confidence 9999998776321 1122356778888999999810
Q ss_pred ------------------CCeeecCCCCCcEEEcCCCcEEEEecCCCc
Q 003978 624 ------------------PPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 653 (782)
Q Consensus 624 ------------------~~ivHrDIKp~NILl~~~~~vkL~DFGla~ 653 (782)
..++|+|++|.|||++.++.+.|+||+.+.
T Consensus 165 ~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 165 KDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred CCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 238999999999999876556799999774
No 303
>2vlg_A Sporulation kinase A; histidine kinase, two-component regulatory system, two-component signal transduction, transferase, phosphorylation, SCOD; 1.7A {Bacillus subtilis}
Probab=99.21 E-value=2.9e-11 Score=109.65 Aligned_cols=92 Identities=21% Similarity=0.160 Sum_probs=68.6
Q ss_pred HHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHc-CCeEEEEEEEEcCCC
Q 003978 134 NILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKM-GERWTGQFPAKTKTE 212 (782)
Q Consensus 134 ~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~-g~~~~~e~~~~~kdG 212 (782)
.+|+++++.|+++|.+|+|+|+|+++++++||+.+|++|+++.++++|++.... ...+.. +.....++++++|||
T Consensus 3 ~lle~~~d~i~v~d~~G~i~yvn~~~~~~lGy~~~el~G~~~~~~ihp~D~~~~----~~~~~~~~~~~~~e~r~~~kdG 78 (111)
T 2vlg_A 3 FPLQTKTDIHAVLASNGRIIYISANSKLHLGYLQGEMIGSFLKTFLHEEDQFLV----ESYFYNEHHLMPCTFRFIKKDH 78 (111)
T ss_dssp ------CCEEEEECTTSBEEEECTTHHHHHSCCHHHHTTSBGGGGBCGGGHHHH----HHHHHCSCCSSCEEEEEECTTS
T ss_pred chhhcCCCEEEEEcCCCeEEEEChHHHHHhCCCHHHHcCCcHHHeECHhHHHHH----HHHHhccCCCccEEEEEEcCCC
Confidence 478999999999999999999999999999999999999999999998875332 233332 233455788899999
Q ss_pred CEEEEEEEEEEEECCCC
Q 003978 213 ERVLVVATNTPFYDDDG 229 (782)
Q Consensus 213 ~~~~v~~~~~Pi~d~~G 229 (782)
+.+|+.+++.++.+.++
T Consensus 79 ~~~wve~~~~~v~~~~~ 95 (111)
T 2vlg_A 79 TIVWVEAAVEIVTTRAE 95 (111)
T ss_dssp CEEEEEEEEEEC-----
T ss_pred CEEEEEEEEEEEecccC
Confidence 99999999999987654
No 304
>3cax_A Uncharacterized protein PF0695; structural genomics, unknown function, PSI-2, protein struct initiative; 2.43A {Pyrococcus furiosus dsm 3638}
Probab=99.20 E-value=2.2e-11 Score=134.08 Aligned_cols=118 Identities=17% Similarity=0.331 Sum_probs=98.8
Q ss_pred cCHHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEE
Q 003978 127 FTDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFP 206 (782)
Q Consensus 127 l~~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~ 206 (782)
+..+.+..||+++++||+++|.+|+|+|+|++ ++++ ++.++++|+++.+++++.. ....+.+..++++|+....+..
T Consensus 236 ~~~~~l~~IL~~l~dgIivvD~~g~I~~~N~a-e~i~-~~~~e~iGr~v~~~~p~~~-~~~~~~l~~~l~~g~~~~~~~~ 312 (369)
T 3cax_A 236 LNIEELKAIFEALPVDVTFIDKDDRVRFFSPG-ERIF-TRTPSVLGRPVQLCHPPKS-VYVVNKILKAFKEGRKKEATFW 312 (369)
T ss_dssp ECHHHHHHHHHHSSSEEEEECTTSBEEEECCS-SCSS-CCCGGGTTCBTTTSSCGGG-HHHHHHHHHHHHHTSCSCEEEE
T ss_pred hhHHHHHHHHHhCCCcEEEECCCCcEEEEcCH-HHcc-CChHHHcCCcHHHHCChhh-HHHHHHHHHHHHcCCceEEEEE
Confidence 55688999999999999999999999999999 9999 9999999999999887543 2334567788888887655554
Q ss_pred EEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHH
Q 003978 207 AKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAA 250 (782)
Q Consensus 207 ~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~ 250 (782)
.. .+| .++.++..||+|.+|+++|++.+++|||+++++++.
T Consensus 313 ~~-~~g--~~v~v~~~PI~d~~G~~~G~v~v~~DITe~~~le~~ 353 (369)
T 3cax_A 313 LR-LRE--KYVYIKYVPLFNEKGEYIGTLEMTMDIAPYKKIEGE 353 (369)
T ss_dssp EE-ETT--EEEEEEEEEEECTTSCEEEEEEEEEECHHHHTCCSC
T ss_pred Ee-eCC--EEEEEEEEEEECCCCCEEEEEEEEEcCHHHHHHHHH
Confidence 43 346 578899999999999999999999999999876543
No 305
>4f3l_A Mclock, circadian locomoter output cycles protein kaput; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=99.17 E-value=6.5e-11 Score=129.99 Aligned_cols=109 Identities=16% Similarity=0.138 Sum_probs=97.6
Q ss_pred CceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEcCCCCEEEEEE
Q 003978 140 GQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTEERVLVVA 219 (782)
Q Consensus 140 ~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~~v~~ 219 (782)
.+.++..|.+|+|+|+|++++.++||+++|++|+++.+++++++.......+...+..|+....+++++++||..+|+..
T Consensus 251 ~~f~~~~~~dg~~~~vn~~~~~ilGY~~eEl~g~~~~~~iHpdD~~~~~~~~~~~l~~g~~~~~eyR~~~kdG~~vWv~~ 330 (361)
T 4f3l_A 251 EEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQT 330 (361)
T ss_dssp CEEEEEECTTSBEEEECTTSHHHHCCCHHHHTTSBGGGGBCHHHHHHHHHHHHHHHHHSEEECCCEEEECTTSEEEEEEE
T ss_pred ceeEEEEcCCceEEEECChhhhhhCcCHHHHcCCCHHHeECHHHHHHHHHHHHHHHhCCCcceEEEEEEecCCCEEEEEE
Confidence 34566789999999999999999999999999999999999988765556677888888877778999999999999999
Q ss_pred EEEEEECC-CCCEEEEEEEEEehhHHHHHH
Q 003978 220 TNTPFYDD-DGTLVGIVCVSTDSRPFQETR 248 (782)
Q Consensus 220 ~~~Pi~d~-~G~v~g~v~i~rDITerk~~E 248 (782)
+..|++|. +|++.+++++.+|||+++..+
T Consensus 331 ~~~~v~~~~~g~~~~iv~~~~dITe~~~~~ 360 (361)
T 4f3l_A 331 HYYITYHQWNSRPEFIVCTHTVVSYAEVRA 360 (361)
T ss_dssp EEEEEECTTTCCEEEEEEEEEECCHHHHHH
T ss_pred EEEEEEcCCCCCeeEEEEEEEECChhHhhc
Confidence 99999998 799999999999999998764
No 306
>3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transfe two-component regulatory system; 3.80A {Thermotoga maritima}
Probab=99.17 E-value=2.2e-12 Score=139.72 Aligned_cols=144 Identities=17% Similarity=0.178 Sum_probs=107.4
Q ss_pred HHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEc
Q 003978 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKT 209 (782)
Q Consensus 130 ~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~ 209 (782)
++++.++++++++|+++|.+|+|+++|++|++++||+.++++|+++.++..... ....+...+..+...... .
T Consensus 8 ~~~~~i~~~~~~~i~~~d~~g~i~~~N~a~~~l~G~~~~e~~G~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~----~ 80 (349)
T 3a0r_A 8 NFSESILESLETAIITLSKDGRITEWNKKAEQLFGLKKENVLGRRLKDLPDFEE---IGSVAESVFENKEPVFLN----F 80 (349)
T ss_dssp -CCCSSGGGSSSEEEEEESSSBCSCBCHHHHHHHSCCSTTTTTCBSTTSTTTTH---HHHHHHHHHHHCCCCEEE----C
T ss_pred HHHHHHHhhhcCeEEEECCCCCEEeeHHHHHHHhCCCHHHHcCcCHHHCcChhH---HHHHHHHHHhcCCceeec----c
Confidence 456789999999999999999999999999999999999999999998833222 223345556666654322 1
Q ss_pred CCCCEEEEEEEEEEEECCCCCE-EEEEEEEEehhHHHHHHHHHHHhhccccccccCCchhHHHHHhCCCchhHHHHHHH
Q 003978 210 KTEERVLVVATNTPFYDDDGTL-VGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQATIA 287 (782)
Q Consensus 210 kdG~~~~v~~~~~Pi~d~~G~v-~g~v~i~rDITerk~~E~~L~~~~~~~~~~~i~~~~~gl~~~l~~d~~qpL~~~i~ 287 (782)
..+...|+.++..|+.+.+|.+ .|++++++|||++++++++++..... .....+++.++||+++||..+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~DiTe~~~~e~~~~~~~~~-------~~~~~~~~~i~Helr~pL~~i~~ 152 (349)
T 3a0r_A 81 YKFGERYFNIRFSPFRNAKTQLLEGVIITIDDVTELYKYEEERKRRERL-------SILGEMTARVAHEIRNPITIIGG 152 (349)
T ss_dssp CCBTTBCCEEEEEEECCTTTTSSCEEEEEEECCSTTTTTTTTTTHHHHH-------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCceEEEEEEEEEEcCCCceeeEEEEEEEechHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHhcchHHHHHH
Confidence 2223357888999999888765 58999999999999887766443211 12334888899999999977543
No 307
>1ll8_A PAS kinase; PAS domain, ligand binding, ligand screening, kinase regulation, transferase; NMR {Homo sapiens} SCOP: d.110.3.5
Probab=99.12 E-value=1.8e-11 Score=109.56 Aligned_cols=101 Identities=17% Similarity=0.235 Sum_probs=76.1
Q ss_pred cCceeEEEcCC-CcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHH-HHc-CCeE---EEEEEEEcCCC
Q 003978 139 MGQSVHIFDLS-DRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHR-IKM-GERW---TGQFPAKTKTE 212 (782)
Q Consensus 139 ~~d~I~v~D~d-G~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~-l~~-g~~~---~~e~~~~~kdG 212 (782)
.+++|+++|.+ |+|+++|++|++||||+.+|++|+++.+++++... .....+... +.. +... ..++..+++||
T Consensus 7 ~~~~i~~~d~~~g~I~~~N~aa~~l~G~~~~el~g~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG 85 (114)
T 1ll8_A 7 FNKAIFTVDAKTTEILVANDKACGLLGYSSQDLIGQKLTQFFLRSDS-DVVEALSEEHMEADGHAAVVFGTVVDIISRSG 85 (114)
T ss_dssp TTCEEEEEETTTCBEEEECTTHHHHHTCCTTTTTTSBGGGGSSCTTT-HHHHHTTSSTTSSSSCSSCCCSSSEEECCTTC
T ss_pred CCceEEEEECCCCeEEEehHHHHHHhCCCHHHHcCCCHHHhcCcchh-HHHHHHHHHhhccCCcceeccCcEEEEEecCC
Confidence 45799999999 99999999999999999999999999999887542 111122211 111 1111 23466789999
Q ss_pred CEEEEEEEEEEEECCCCCEEEEEEEEEehh
Q 003978 213 ERVLVVATNTPFYDDDGTLVGIVCVSTDSR 242 (782)
Q Consensus 213 ~~~~v~~~~~Pi~d~~G~v~g~v~i~rDIT 242 (782)
..+|+.++++|+.+.++ .+++++++|++
T Consensus 86 ~~~~v~~~~~~~~~~~~--~~~v~~~~~~~ 113 (114)
T 1ll8_A 86 EKIPVSVWMKRMRQERR--LCCVVVLEPVE 113 (114)
T ss_dssp CCEEEECCEECCBSSSS--BEEEEEEEECC
T ss_pred CEEEEEEEEEeeccCCc--cEEEEEEeecC
Confidence 99999999999987654 36788999975
No 308
>1nwz_A PYP, photoactive yellow protein; PAS, LOV, GAF, domains fold, signaling protein; HET: HC4; 0.82A {Halorhodospira halophila} SCOP: d.110.3.1 PDB: 1kou_A* 1ot9_A* 1otb_A* 1s4r_A* 1s4s_A* 1ts0_A* 1ts6_A* 1ts7_A* 1ts8_A* 1uwn_X* 1uwp_X* 2d01_A* 2phy_A* 2pyp_A* 2pyr_A* 2qj5_A* 2qj7_A* 2qws_A* 2zoh_A* 2zoi_A* ...
Probab=99.07 E-value=1.4e-09 Score=99.99 Aligned_cols=101 Identities=9% Similarity=-0.039 Sum_probs=80.0
Q ss_pred HHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccc-cccccccHHHHHHHHHHcCCeEEEEEEEEcCC
Q 003978 133 LNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELL-TDGRDFDVAYDIVHRIKMGERWTGQFPAKTKT 211 (782)
Q Consensus 133 ~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~-~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kd 211 (782)
..+++++++||+++|.+|+|++||+++++++||++++++|+++.+.+ +....+.....+.+.++.|..........+++
T Consensus 20 ~~~ld~l~~Gii~lD~~g~I~~~N~~~e~~sG~~~~eviGk~~f~~~~~~~~~~~f~~rf~~~~~~g~l~~~~~~v~~~~ 99 (125)
T 1nwz_A 20 DGQLDGLAFGAIQLDGDGNILQYNAAEGDITGRDPKQVIGKNFFKDVAPCTDSPEFYGKFKEGVASGNLNTMFEYTFDYQ 99 (125)
T ss_dssp HHHHTTCSSEEEEEETTCBEEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHHTCCEEEEEEEECTT
T ss_pred HHHHhccCceEEEECCCCEEEEEHHHHHHHhCCCHHHHcCCchhhhccchhcccHHHHHHHHHHhcCceeEEEEEEEcCC
Confidence 44799999999999999999999999999999999999999998754 44444555556788888888433444445999
Q ss_pred CCEEEEEEEEEEEECCCCCEEEEE
Q 003978 212 EERVLVVATNTPFYDDDGTLVGIV 235 (782)
Q Consensus 212 G~~~~v~~~~~Pi~d~~G~v~g~v 235 (782)
|. ++.+.+.+..+.+|..++++
T Consensus 100 ~~--p~~v~i~l~~~~~~~~~~i~ 121 (125)
T 1nwz_A 100 MT--PTKVKVHMKKALSGDSYWVF 121 (125)
T ss_dssp SC--CEEEEEEEEECSSSSEEEEE
T ss_pred CC--EEEEEEEEEEcCCCCEEEEE
Confidence 98 55666667778888877664
No 309
>3a0s_A Sensor protein; PAS-fold, kinase, phosphoprotein, transferase, two-component regulatory system; HET: PG4 PGE; 1.47A {Thermotoga maritima} PDB: 3a0v_A*
Probab=99.06 E-value=1e-09 Score=92.13 Aligned_cols=95 Identities=21% Similarity=0.263 Sum_probs=72.9
Q ss_pred cCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEcCCCCEEEEE
Q 003978 139 MGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTEERVLVV 218 (782)
Q Consensus 139 ~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~~v~ 218 (782)
++++|+++|.+|+|+++|+++++++|++.++++|+++.++ +. . ......+...+..+..+... .. +|...|+.
T Consensus 1 ~~~~i~~~d~~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~-~~-~-~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~ 73 (96)
T 3a0s_A 1 METAIITLSKDGRITEWNKKAEQLFGLKKENVLGRRLKDL-PD-F-EEIGSVAESVFENKEPVFLN--FY--KFGERYFN 73 (96)
T ss_dssp CCCEEEEEETTSBEEEECHHHHHHHCCCHHHHTTSBGGGS-TT-C-HHHHHHHHHHHHHTCCEEEE--EE--EETTEEEE
T ss_pred CCceEEEEcCCCCEeehhHHHHHHhCCCHHHhcCCCHHHC-cc-h-HHHHHHHHHHhccCCeEEEE--EE--cCCcEEEE
Confidence 4689999999999999999999999999999999999988 32 2 22233455666666665322 22 34446899
Q ss_pred EEEEEEECCCCC-EEEEEEEEEe
Q 003978 219 ATNTPFYDDDGT-LVGIVCVSTD 240 (782)
Q Consensus 219 ~~~~Pi~d~~G~-v~g~v~i~rD 240 (782)
+++.|+.+.+|. +.|++++++|
T Consensus 74 ~~~~p~~~~~~~~~~g~v~~~~D 96 (96)
T 3a0s_A 74 IRFSPFRNAKTQLLEGVIITIDD 96 (96)
T ss_dssp EEEEEEECTTTCCEEEEEEEEEC
T ss_pred EEEEEeEcCCCCeeeEEEEEecC
Confidence 999999988665 6799999887
No 310
>4f3l_B BMAL1B; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=99.05 E-value=3.8e-10 Score=125.01 Aligned_cols=108 Identities=15% Similarity=0.112 Sum_probs=89.5
Q ss_pred cCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCe-EEEEEEEEcCCCCEEEE
Q 003978 139 MGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGER-WTGQFPAKTKTEERVLV 217 (782)
Q Consensus 139 ~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~-~~~e~~~~~kdG~~~~v 217 (782)
..+-++..|.+|+|+|+|++++.++||+++|++|+++.++++|++.......+...+..+.. ...+++++++||..+|+
T Consensus 277 ~~~fi~~~~~dg~~~~vn~~~~~ilGY~~eEl~g~~~~~~iHpdD~~~~~~~~~~~l~~~~~~~~~eyR~~~kdG~~vWv 356 (387)
T 4f3l_B 277 SMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITL 356 (387)
T ss_dssp CCEEEEEECTTSBEEEECTHHHHHHCCCHHHHTTSBGGGTBCHHHHHHHHHHHHHHTTCSSCEECCCEEEECTTSCEEEE
T ss_pred CceEEEEECCCCEEEEECCCcccccCCCHHHHcCCcHHHeeCHHHHHHHHHHHHHHHhcCCCeeeEEEEEEccCCCEEEE
Confidence 44567779999999999999999999999999999999999988765444445555655544 56689999999999999
Q ss_pred EEEEEEEECC-CCCEEEEEEEEEehhHHHH
Q 003978 218 VATNTPFYDD-DGTLVGIVCVSTDSRPFQE 246 (782)
Q Consensus 218 ~~~~~Pi~d~-~G~v~g~v~i~rDITerk~ 246 (782)
..+..+++|. +|++.++|++.+|||+||.
T Consensus 357 ~~~~~~~~~~~~g~~~~ivg~~~dIT~Rk~ 386 (387)
T 4f3l_B 357 RSRWFSFMNPWTKEVEYIVSTNTVVLANVL 386 (387)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEEECC----
T ss_pred EEEEEEEECCCCCCEEEEEEEEEEcchhhc
Confidence 9999999987 7899999999999999974
No 311
>1mzu_A PPR; photoactive yellow protein, PAS, PYP, signaling protein; HET: HC4; 2.00A {Rhodospirillum centenum} SCOP: d.110.3.1
Probab=99.04 E-value=1.9e-09 Score=99.38 Aligned_cols=100 Identities=12% Similarity=-0.063 Sum_probs=79.0
Q ss_pred HHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccc-cccccccHHHHHHHHHHcCCeEEEEEEEEcCCC
Q 003978 134 NILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELL-TDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTE 212 (782)
Q Consensus 134 ~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~-~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG 212 (782)
.+|+++++||+++|.+|+|++||.++++++||++++++|+++.+.+ +....+.....+.+.++.|..........+++|
T Consensus 26 ~~ld~l~~GiivlD~dg~I~~~N~~~e~isG~s~eeviGk~~f~~~~p~~~~~~f~grf~~~~~~G~l~~~~~yv~~~~~ 105 (129)
T 1mzu_A 26 AEFDALPVGAIQVDGSGVIHRYNRTESRLSGRIPERVIGRNFFTEVAPCTNIPAFSGRFMDGVTSGTLDARFDFVFDFQM 105 (129)
T ss_dssp TTGGGCSSEEEEEETTCBEEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHTSCCEEEEEEEEECSS
T ss_pred HHHhccCceEEEECCCCeEEEEHHHHHHHhCCCHHHHcCCchhhhccchhcccHHHHHHHHHHhcCceeEEEEEEEcCCC
Confidence 3699999999999999999999999999999999999999998754 444445555567888887774333444458899
Q ss_pred CEEEEEEEEEEEECCCCCEEEEE
Q 003978 213 ERVLVVATNTPFYDDDGTLVGIV 235 (782)
Q Consensus 213 ~~~~v~~~~~Pi~d~~G~v~g~v 235 (782)
. ++.+.+.+..+.+|..++++
T Consensus 106 ~--p~~v~i~l~~~~~~~~~~i~ 126 (129)
T 1mzu_A 106 A--PVRVQIRMQNAGVPDRYWIF 126 (129)
T ss_dssp C--EEEEEEEEEECSSTTEEEEE
T ss_pred C--EEEEEEEEEEcCCCCEEEEE
Confidence 8 55666667778888877664
No 312
>2w0n_A Sensor protein DCUS; signal transduction, two-component regulatory system, PAS, kinase, membrane, transferase, solid state cell inner membrane; NMR {Escherichia coli}
Probab=99.02 E-value=5e-11 Score=105.71 Aligned_cols=105 Identities=18% Similarity=0.215 Sum_probs=83.7
Q ss_pred CcCHHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCC---ChhhHcCCCccccccccccccHHHHHHHHHHcCCeEE
Q 003978 126 NFTDRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGY---SAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWT 202 (782)
Q Consensus 126 ~l~~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gy---s~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~ 202 (782)
....+.++.++++++++|+++|.+|+|+++|++|++++|| +.++++|+++.+++++.. +...+..+....
T Consensus 11 ~~~~~~~~~il~~~~~~i~~~d~~g~i~~~N~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~ 83 (118)
T 2w0n_A 11 STLFEQRQAMLQSIKEGVVAVDDRGEVTLINDAAQELLNYRKSQDDEKLSTLSHSWSQVVD-------VSEVLRDGTPRR 83 (118)
T ss_dssp CTTHHHHHHHHHCCCCCCEEEBTTTBCCCBCHHHHHHHCSCTTTTTSSCCCTTCCCSCTHH-------HHHHHHTTCCCC
T ss_pred HHHHHHHHHHHhhccccEEEECCCCcEeehhHHHHHHhCCCccChhhhhccCcccccCchh-------HHHHhccCceec
Confidence 3446778999999999999999999999999999999998 889999999998876532 455566665432
Q ss_pred EEEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehh
Q 003978 203 GQFPAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSR 242 (782)
Q Consensus 203 ~e~~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDIT 242 (782)
... ...+| .|+.++..|+.+ +|++.|++++++|||
T Consensus 84 ~~~--~~~~~--~~~~~~~~p~~~-~g~~~g~v~~~~DiT 118 (118)
T 2w0n_A 84 DEE--ITIKD--RLLLINTVPVRS-NGVIIGAISTFRDKT 118 (118)
T ss_dssp CCC--EESSS--CEECCCEECCCC-SSCCCCEEECCCCCC
T ss_pred cEE--EEECC--EEEEEeeceeee-CCEEEEEEEEEEeCC
Confidence 221 12355 467888899987 888889999999997
No 313
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.00 E-value=5.5e-10 Score=122.08 Aligned_cols=146 Identities=19% Similarity=0.242 Sum_probs=107.4
Q ss_pred eeEeeeeccCCcEEEEEEEEcCCeEEEEEEe--ccCCCHHHHHHHHHHHHHHHhCC--CCceeEEeeeeecC---CceeE
Q 003978 507 LTIGEQIGQGSCGTVYHAVWYGSDVAVKVFS--RQEYSDEVIHSFRQEVSLMKRLR--HPNVLLFMGAVTSP---QRLCI 579 (782)
Q Consensus 507 y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~--~~~~~~~~~~~~~~Ei~il~~l~--HpnIv~l~~~~~~~---~~~~l 579 (782)
...++.|+.|.++.||++...+..+++|+.. ..... .....+.+|+.+++.+. +..+++++.++.+. +..|+
T Consensus 40 ~~~~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~-~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~ 118 (359)
T 3dxp_A 40 PLSVEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLL-PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFY 118 (359)
T ss_dssp CCEEEECCC-CCSCEEEEECSSCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEE
T ss_pred CceEEEcCCcccceEEEEEECCceEEEEeCCCCCCCCC-CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEE
Confidence 3346789999999999999888889999876 33211 12346778999999996 44578888888766 45899
Q ss_pred EEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcC-------------------------------------
Q 003978 580 VTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC------------------------------------- 622 (782)
Q Consensus 580 v~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~------------------------------------- 622 (782)
||||++|..+.+.. ...++......++.+++..|..||..
T Consensus 119 vme~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 119 IMEFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp EEECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred EEEecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 99999987664321 12356777778888999999999972
Q ss_pred -------------------CCCeeecCCCCCcEEEcCCCc--EEEEecCCCcccc
Q 003978 623 -------------------NPPIIHRDLKSSNLLVDKHWT--VKVGDFGLSRLKH 656 (782)
Q Consensus 623 -------------------~~~ivHrDIKp~NILl~~~~~--vkL~DFGla~~~~ 656 (782)
...++|+|++|.|||++.++. +.|+||+.+...+
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g~ 250 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGH 250 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEEC
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccCC
Confidence 134999999999999997753 6899999987543
No 314
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=99.00 E-value=2.5e-10 Score=112.35 Aligned_cols=105 Identities=14% Similarity=0.203 Sum_probs=82.0
Q ss_pred HHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCC-e-EEEEEE
Q 003978 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGE-R-WTGQFP 206 (782)
Q Consensus 129 ~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~-~-~~~e~~ 206 (782)
.+.++.+++++++||+++|.+|+|+++|++|++++|++.++++|+++.++++... +...+..+. . ...++.
T Consensus 79 ~~~l~~il~~~~~gvi~~D~~g~I~~~N~aa~~llg~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 151 (190)
T 2jhe_A 79 HLALSALLEALPEPVLSVDMKSKVDMANPASCQLFGQKLDRLRNHTAAQLINGFN-------FLRWLESEPQDSHNEHVV 151 (190)
T ss_dssp HHHHHHHHHHCSSCEEEECTTCBEEEECHHHHHHHTSCHHHHTTSBGGGTSTTCC-------HHHHHHTCCCSCEEEEEE
T ss_pred HHHHHHHHHhCCCcEEEEcCCCCEEEEcHHHHHHhCCCHHHhcCccHHHHhCCCC-------HHHHHhcCCCCCcceEEE
Confidence 3578999999999999999999999999999999999999999999999887543 233455554 2 333333
Q ss_pred EEcCCCCEEEEEEEEEEEECCCCC----EEEEEEEEEehhHHH
Q 003978 207 AKTKTEERVLVVATNTPFYDDDGT----LVGIVCVSTDSRPFQ 245 (782)
Q Consensus 207 ~~~kdG~~~~v~~~~~Pi~d~~G~----v~g~v~i~rDITerk 245 (782)
. +|. ++.+.+.|+.+.+|+ +.|++.+++|||+++
T Consensus 152 ~---~g~--~~~~~~~pi~~~~~~~~~~~~g~v~~~~DiTe~~ 189 (190)
T 2jhe_A 152 I---NGQ--NFLMEITPVYLQDENDQHVLTGAVVMLRSTIRMG 189 (190)
T ss_dssp E---TTE--EEEEEEEEETTTTEEEEEEEE-HHHHHHHHTTTC
T ss_pred E---CCe--EEEEEEEEEEecCCCCcceEEeEEEEEeccchhc
Confidence 2 664 456778899875665 789999999999864
No 315
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.99 E-value=4.2e-10 Score=116.22 Aligned_cols=137 Identities=16% Similarity=0.092 Sum_probs=97.3
Q ss_pred ccceeEeeeeccCCcEEEEEEEEc-CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCc--eeEEeeeeecCCceeEE
Q 003978 504 WEDLTIGEQIGQGSCGTVYHAVWY-GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPN--VLLFMGAVTSPQRLCIV 580 (782)
Q Consensus 504 ~~~y~i~~~IG~G~~G~Vy~~~~~-~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~Hpn--Iv~l~~~~~~~~~~~lv 580 (782)
...|.+....+.|..+.||++... +..+++|+..... ...+.+|+.+++.+.+.+ +++++++....+..++|
T Consensus 19 ~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~-----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v 93 (264)
T 1nd4_A 19 LFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA-----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLL 93 (264)
T ss_dssp TTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT-----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEE
T ss_pred cCCCceEecccCCCCceEEEEecCCCCeEEEEeCCccc-----chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEE
Confidence 345665554456677999999764 5679999976542 134677899998885434 56788888887889999
Q ss_pred EeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCC-------------------------------------
Q 003978 581 TEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCN------------------------------------- 623 (782)
Q Consensus 581 ~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~------------------------------------- 623 (782)
|||++|.+|. ... ... ..++.+++..|..||+..
T Consensus 94 ~e~i~G~~l~--~~~----~~~---~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (264)
T 1nd4_A 94 LGEVPGQDLL--SSH----LAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQG 164 (264)
T ss_dssp EECCSSEETT--TSC----CCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTT
T ss_pred EEecCCcccC--cCc----CCH---hHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccC
Confidence 9999998873 211 111 134556666777777532
Q ss_pred -------------------CCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 624 -------------------PPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 624 -------------------~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
..++|+|++|.|||++.++.+.|+||+.+..
T Consensus 165 ~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 165 LAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp CCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred ccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 1299999999999998776677999998753
No 316
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.87 E-value=2e-09 Score=114.81 Aligned_cols=185 Identities=20% Similarity=0.194 Sum_probs=119.1
Q ss_pred eeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCc--eeEEeeeeecCC---ceeEEEee
Q 003978 510 GEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPN--VLLFMGAVTSPQ---RLCIVTEF 583 (782)
Q Consensus 510 ~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-Hpn--Iv~l~~~~~~~~---~~~lv~E~ 583 (782)
++.++.|.+..||++. ..+++|+.... .....+.+|+++|+.+. +.. +++++....... ..|+||++
T Consensus 25 i~~~~~G~~n~v~~v~---~~~vlR~~~~~----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~ 97 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN---RDFIFKFPKHS----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK 97 (304)
T ss_dssp CCEEEECSSEEEEEST---TSEEEEEESSH----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred eEecCCCCcceEEEEC---CEEEEEecCCc----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence 3568999999999873 67999986432 44567889999998873 322 445555544333 34899999
Q ss_pred cCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcC-----------------------------------------
Q 003978 584 LPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHC----------------------------------------- 622 (782)
Q Consensus 584 ~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~----------------------------------------- 622 (782)
++|.+|...... .++......++.+++..|..||+.
T Consensus 98 i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 98 IKGVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CCCEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred cCCeECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 999877643321 245555566666777777666641
Q ss_pred ---------------CCCeeecCCCCCcEEEcC--CCcEEEEecCCCcccccccccccCCCCCCcccCccccc------C
Q 003978 623 ---------------NPPIIHRDLKSSNLLVDK--HWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLR------N 679 (782)
Q Consensus 623 ---------------~~~ivHrDIKp~NILl~~--~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~------~ 679 (782)
...++|+|++|.||+++. ...+.|+||+.+...+.......... ...-..|+... +
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~~l~~Y~ 253 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLME-DDEEYGMEFVSKILNHYK 253 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCC-TTTSCCHHHHHHHHHHHT
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHh-hccccCHHHHHHHHHHcC
Confidence 123899999999999998 45678999999875433211111100 00002233211 1
Q ss_pred CCC--------CchhHHHHHHHHHHHHHcCCCCC
Q 003978 680 EPS--------DEKSDVYSFGVILWELATEKIPW 705 (782)
Q Consensus 680 ~~~--------s~~sDIwSLG~ll~elltG~~Pf 705 (782)
... ....+.|+++.++|.+.+|..+|
T Consensus 254 ~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 254 HKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 100 12368999999999999998876
No 317
>3rty_A Period circadian protein; PAS domain, signalling, timeless, circadian clock protein; 2.85A {Drosophila melanogaster} PDB: 1wa9_A 3gec_A
Probab=98.68 E-value=7.2e-08 Score=104.47 Aligned_cols=105 Identities=12% Similarity=0.033 Sum_probs=88.1
Q ss_pred CceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCe-----EEEEEEEEcCCCCE
Q 003978 140 GQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGER-----WTGQFPAKTKTEER 214 (782)
Q Consensus 140 ~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~-----~~~e~~~~~kdG~~ 214 (782)
.+.|+..|.+|+|+|+|+++..++||.++|++|+++.+++++++.......+...+..|+. ...+++++++||..
T Consensus 154 ~~fi~r~~~dG~~~yvn~~~~~lLGY~peELiG~s~~~~vHPdD~~~~~~~~~~~l~~G~~~~~~~~s~~yR~~~kdG~~ 233 (339)
T 3rty_A 154 PKFAIRHTATGIISHVDSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQNGCY 233 (339)
T ss_dssp CEEEEEEETTCBEEEECTTHHHHHCCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHHHHTTSTTCCCBCCCEEEECTTSCE
T ss_pred ceEEEEECCCCeEEEcChhhhcccCCCHHHHcCCcHHHEECHHHHHHHHHHHHHHHHcCCcccccccceEEEEEccCCCE
Confidence 4677789999999999999999999999999999999999998865555566777777774 35689999999999
Q ss_pred EEEEEEEEEEECCC-CCEEEEEEEEEehhHH
Q 003978 215 VLVVATNTPFYDDD-GTLVGIVCVSTDSRPF 244 (782)
Q Consensus 215 ~~v~~~~~Pi~d~~-G~v~g~v~i~rDITer 244 (782)
+|+..+..+++|.. +++.++|++-+.|+..
T Consensus 234 vWlet~~~~~~np~s~~~~~II~~h~vi~~p 264 (339)
T 3rty_A 234 VLLETEWTSFVNPWSRKLEFVVGHHRVFQGP 264 (339)
T ss_dssp EEEEEEEEEEECTTTCSEEEEEEEEEEEECC
T ss_pred EEEEEEEEEEECCCCCCeeEEEEEEEECCCC
Confidence 99999999999865 5677777777765543
No 318
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.67 E-value=7.6e-08 Score=103.45 Aligned_cols=182 Identities=16% Similarity=0.137 Sum_probs=114.7
Q ss_pred ceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCC----CceeEEeeeeecCCceeEEE
Q 003978 506 DLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRH----PNVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~H----pnIv~l~~~~~~~~~~~lv~ 581 (782)
.+.-.+.++.|....||++ +..+++|+... ......+.+|.++|+.+.+ ..+++++++ +..|+||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v---g~~~vlR~~~~----~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvm 106 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC---NEQYVVKVPKR----DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIM 106 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE---TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEE
T ss_pred ceEEEEeCCCCCCceEEEE---CCEEEEEeCCc----HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEE
Confidence 4455678999999999998 88899998633 2334568889999988865 124455554 5678999
Q ss_pred eecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCC--------------------------------------
Q 003978 582 EFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCN-------------------------------------- 623 (782)
Q Consensus 582 E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~-------------------------------------- 623 (782)
||++|.++..... ..++......++.+++..|..||+..
T Consensus 107 e~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
T 3r70_A 107 KYIKGERITYEQY---HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTD 183 (320)
T ss_dssp ECCCCBCCCHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred eecCCcccccccc---ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccc
Confidence 9999988753321 12344444555556666666665322
Q ss_pred -----------------------CCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCCCCCcccCccccc--
Q 003978 624 -----------------------PPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLR-- 678 (782)
Q Consensus 624 -----------------------~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~-- 678 (782)
..++|+|++|.|||++.++.+.|+||+.+...+.................|+...
T Consensus 184 ~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 263 (320)
T 3r70_A 184 EMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDPDNDFLCLLDCSTDDFGKEFGRKV 263 (320)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEECGGGGGHHHHSCCTTSCCHHHHHHH
T ss_pred cchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCCHHHHHHHHHHhcccccCHHHHHHH
Confidence 2259999999999999866679999999875443322111111111123444321
Q ss_pred --CCC------CCchhHHHHHHHHHHHHHcC
Q 003978 679 --NEP------SDEKSDVYSFGVILWELATE 701 (782)
Q Consensus 679 --~~~------~s~~sDIwSLG~ll~elltG 701 (782)
... .....+.|..-..+++++.|
T Consensus 264 l~~Y~~~~~~~~~~~~~~~~~~~~l~~l~~~ 294 (320)
T 3r70_A 264 LKYYQHKAPEVAERKAELNDVYWSIDQIIYG 294 (320)
T ss_dssp HHHTTCSCHHHHHHHHHHHHHTHHHHHHHSS
T ss_pred HHHHhccCcHHHHHHHHHHHHHhHHHHHHHH
Confidence 110 11356777555557778777
No 319
>2ykf_A Pdtas, probable sensor histidine kinase pdtas; transferase, two-component system, GAF domain, PAS domain; 2.00A {Mycobacterium tuberculosis} PDB: 2ykh_A
Probab=98.05 E-value=4.1e-09 Score=112.85 Aligned_cols=112 Identities=16% Similarity=0.132 Sum_probs=80.7
Q ss_pred HHHHcCceeEEEcCCCcEEEecHHHHHHhC---CChhhHcCCCcccccccc---cc-c-cHHHHHHHHHHc-CCeEEEEE
Q 003978 135 ILQSMGQSVHIFDLSDRIIYWNRSAELLYG---YSAEEALGQDAIELLTDG---RD-F-DVAYDIVHRIKM-GERWTGQF 205 (782)
Q Consensus 135 ile~~~d~I~v~D~dG~Ii~vN~aae~l~G---ys~eEliG~~~~~l~~~~---~~-~-~~~~~l~~~l~~-g~~~~~e~ 205 (782)
+++++++||+++|.+|+|+|+|++|+++|| +. ++++|+++.++++.. .. . .....+..++.. +.....++
T Consensus 175 ~~~~~~dGIivvD~~G~Ii~~N~aA~~ll~~lG~~-~~~iGk~l~el~~~~~~~~~~~~~~~~~l~~vl~~~~~~~~~ei 253 (305)
T 2ykf_A 175 SSPRAGDGFIRLDVDGVVSYASPNALSAYHRMGLT-TELEGVNLIDATRPLISDPFEAHEVDEHVQDLLAGDGKGMRMEV 253 (305)
Confidence 456899999999999999999999999985 54 789999999988654 11 0 011112223433 33332222
Q ss_pred EEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHH
Q 003978 206 PAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWD 253 (782)
Q Consensus 206 ~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~ 253 (782)
. .+| .++.++..|+++ +|++.|++.+++|||+++++|++|+.
T Consensus 254 ~---~~~--~~l~v~~~Pi~~-~g~~~G~Vvv~rDITE~~~lE~eL~~ 295 (305)
T 2ykf_A 254 D---AGG--ATVLLRTLPLVV-AGRNVGAAILIRDVTEVKRRDRALIS 295 (305)
Confidence 1 122 467788899986 67889999999999999999999854
No 320
>4dj3_A Period circadian protein homolog 3; PAS domain, circadian rhythm, protein binding; 2.50A {Mus musculus}
Probab=98.46 E-value=7.5e-07 Score=95.50 Aligned_cols=101 Identities=12% Similarity=0.042 Sum_probs=82.4
Q ss_pred ceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCe---EEEEEEEEcCCCCEEEE
Q 003978 141 QSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGER---WTGQFPAKTKTEERVLV 217 (782)
Q Consensus 141 d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~---~~~e~~~~~kdG~~~~v 217 (782)
+-+...+.+|+|+|+|+++..++||.++|++|+++.+++++++.......+.+.++.+.. ...+++++++||..+|+
T Consensus 175 ~Fitrh~~dG~~~yvs~~~~~lLGY~peELig~s~~~~vHPdD~~~~~~~~~~~l~~~~~~~f~s~~yR~~~kdG~~vwv 254 (317)
T 4dj3_A 175 IFTTTHTPGCVFLEVDERAVPLLGYLPQDLIGTSILTYLHPEDRPLMVAIHQKVLKYAGHPPFEHSPVRFCTQNGEYVIL 254 (317)
T ss_dssp EEEEEECTTSBEEEECTTHHHHHSCCHHHHTTSBGGGGBCTTTTTHHHHHHHHHHHTTTSCCEECCCEEEECTTSCEEEE
T ss_pred ceEEEecCCCeEEEEChHHhhhcCcChHHHcCCCHHHeECHHHHHHHHHHHHHHHHcCCCccccceEEEEEccCCCEEEE
Confidence 345557889999999999999999999999999999999998876555556667776554 45689999999999999
Q ss_pred EEEEEEEECC-CCCEEEEEEEEEeh
Q 003978 218 VATNTPFYDD-DGTLVGIVCVSTDS 241 (782)
Q Consensus 218 ~~~~~Pi~d~-~G~v~g~v~i~rDI 241 (782)
.....+++|. .+++.++|+.-+-+
T Consensus 255 et~~~~~~np~s~~~e~II~~h~v~ 279 (317)
T 4dj3_A 255 DSSWSSFVNPWSRKVSFIIGRHKVR 279 (317)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEC
T ss_pred EEEEEEEECCCCCcccEEEEEEEec
Confidence 9999999986 45666666666543
No 321
>3gdi_A Period circadian protein homolog 2; tandem PAS domains, biological rhythms, cytoplasm, nucleus, phosphoprotein, transcription; 2.40A {Mus musculus}
Probab=98.43 E-value=1.3e-06 Score=93.44 Aligned_cols=103 Identities=10% Similarity=0.027 Sum_probs=84.0
Q ss_pred ceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCC-eEE-EEEEEEcCCCCEEEEE
Q 003978 141 QSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGE-RWT-GQFPAKTKTEERVLVV 218 (782)
Q Consensus 141 d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~-~~~-~e~~~~~kdG~~~~v~ 218 (782)
.-+...+.+|+|+|+|+++..++||.++|++|+++.+++++++.........+.++.+. ... ..++++++||..+|++
T Consensus 166 ~Fitrh~~dG~~~yvd~~~~~lLGY~peELig~s~~~~iHpdD~~~~~~~~~~~l~~~g~~~~~~~yR~~~kdG~~vwve 245 (309)
T 3gdi_A 166 IFTTTHTPNCLFQAVDERAVPLLGYLPQDLIETPVLVQLHPSDRPLMLAIHKKILQAGGQPFDYSPIRFRTRNGEYITLD 245 (309)
T ss_dssp EEEEEECTTCBEEEECTTHHHHHSCCHHHHTTSBHHHHBCTTSHHHHHHHHHHHHHTTTCCEEEEEEEEECTTSCEEEEE
T ss_pred eEEEEecCCCeEEEECcccccccCcCHHHHcCCCHHHhCCHHHHHHHHHHHHHHHhcCCceeeceEEEEEccCCCEEEEE
Confidence 34556888999999999999999999999999999999999886544445566666544 355 5899999999999999
Q ss_pred EEEEEEECC-CCCEEEEEEEEEehhH
Q 003978 219 ATNTPFYDD-DGTLVGIVCVSTDSRP 243 (782)
Q Consensus 219 ~~~~Pi~d~-~G~v~g~v~i~rDITe 243 (782)
....+++|. .+++.++|+.-+-|+.
T Consensus 246 t~~~~~~np~s~~~e~ii~~h~v~~g 271 (309)
T 3gdi_A 246 TSWSSFINPWSRKISFIIGRHKVRVG 271 (309)
T ss_dssp EEEEEEECTTTCCEEEEEEEEEEEEC
T ss_pred EEEEEEECCCCCcccEEEEEEEEccC
Confidence 999999875 5677788887776653
No 322
>4dj2_A Period circadian protein homolog 1; PAS domains, circadian clock protein, protein binding; 2.75A {Mus musculus}
Probab=98.39 E-value=1e-06 Score=94.59 Aligned_cols=104 Identities=12% Similarity=0.041 Sum_probs=83.5
Q ss_pred CceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHc-CCeE-EEEEEEEcCCCCEEEE
Q 003978 140 GQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKM-GERW-TGQFPAKTKTEERVLV 217 (782)
Q Consensus 140 ~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~-g~~~-~~e~~~~~kdG~~~~v 217 (782)
.+-+...+.+|+|+|+|+++..++||.++|++|+++.+++++++.......+.+.++. |... ..+++++++||..+|+
T Consensus 176 ~~Fitrh~~dG~~~yvd~~~~~lLGY~peELig~s~~~~vHPdD~~~~~~~~~~~l~~~g~~~~~~~yR~~~kdG~~vwv 255 (320)
T 4dj2_A 176 RIFTTRHTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPFDHSPIRFCARNGEYVTM 255 (320)
T ss_dssp CEEEEEECTTCBEEEECTTHHHHHSCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHTTSSSCCEECCCEEEECSSSCEEEE
T ss_pred ceEEEEecCCceEEEcCcceeccCCcChHHHcCCcHHHhCCHHHHHHHHHHHHHHHhcCCCcccceEEEEEccCCCEEEE
Confidence 3445668889999999999999999999999999999999998865444444555553 4445 3589999999999999
Q ss_pred EEEEEEEECC-CCCEEEEEEEEEehhH
Q 003978 218 VATNTPFYDD-DGTLVGIVCVSTDSRP 243 (782)
Q Consensus 218 ~~~~~Pi~d~-~G~v~g~v~i~rDITe 243 (782)
.....+++|. .+++.++|+.-+-|+.
T Consensus 256 et~~~~~~np~s~~~e~II~~h~v~~g 282 (320)
T 4dj2_A 256 DTSWAGFVHPWSRKVAFVLGRHKVRTA 282 (320)
T ss_dssp ECEEEEEECTTTCSEEEEEEEEEESSC
T ss_pred EEEEEEEECCCCCCccEEEEEEEEccC
Confidence 9999999875 5678888887776653
No 323
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.32 E-value=4.3e-06 Score=89.16 Aligned_cols=75 Identities=15% Similarity=0.075 Sum_probs=56.4
Q ss_pred eeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCC---ceeEEeeeee-cCCceeEEEeecC
Q 003978 510 GEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHP---NVLLFMGAVT-SPQRLCIVTEFLP 585 (782)
Q Consensus 510 ~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~Hp---nIv~l~~~~~-~~~~~~lv~E~~~ 585 (782)
++.++.|....||++ +..+++|+.. .......+.+|.++|+.+.+. .|.+++.+.. ..+..|+||||++
T Consensus 24 v~~l~~G~~n~v~~v---g~~~VlR~~~----~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~ 96 (306)
T 3tdw_A 24 VESLGEGFRNYAILV---NGDWVFRFPK----SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ 96 (306)
T ss_dssp EEEEEECSSEEEEEE---TTTEEEEEES----SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC
T ss_pred eeecCCCcceeEEEE---CCEEEEEecC----CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccC
Confidence 456788999999998 7889999852 234456788999999999642 3556666663 4556789999999
Q ss_pred CCCHHH
Q 003978 586 RGSLFR 591 (782)
Q Consensus 586 ggsL~~ 591 (782)
|..|..
T Consensus 97 G~~l~~ 102 (306)
T 3tdw_A 97 GQILGE 102 (306)
T ss_dssp SEECHH
T ss_pred CeECch
Confidence 987765
No 324
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.27 E-value=2.1e-06 Score=93.96 Aligned_cols=77 Identities=9% Similarity=0.054 Sum_probs=58.2
Q ss_pred ceeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCc--eeEEeeeeecC-CceeEEEe
Q 003978 506 DLTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPN--VLLFMGAVTSP-QRLCIVTE 582 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~Hpn--Iv~l~~~~~~~-~~~~lv~E 582 (782)
....++.|+.|....||++...+..+++|+.... ..+..|+.+++.+.... +.+++.++... +..|+|||
T Consensus 42 ~~~~i~~l~gG~~n~~y~v~~~g~~~vlK~~~~~-------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e 114 (362)
T 3ovc_A 42 SVSDLMQLSEGEESRAFSFDVGGRGYVLRVNSCA-------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISR 114 (362)
T ss_dssp CCEEEEEEEECSSEEEEEEEETTEEEEEEEESCC-------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEE
T ss_pred CCceEEECCCCCcceEEEEEECCcEEEEEeCCch-------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEE
Confidence 3455678999999999999888889999987532 24778889998886433 45677766654 66899999
Q ss_pred ecCCCCH
Q 003978 583 FLPRGSL 589 (782)
Q Consensus 583 ~~~ggsL 589 (782)
|++|..|
T Consensus 115 ~l~G~~l 121 (362)
T 3ovc_A 115 RAQGVTL 121 (362)
T ss_dssp CCCSEET
T ss_pred ecCCCCc
Confidence 9987544
No 325
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.19 E-value=1.1e-05 Score=83.80 Aligned_cols=132 Identities=17% Similarity=0.211 Sum_probs=91.2
Q ss_pred eccCCcE-EEEEEEEc--CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCceeEEEeecCCCC
Q 003978 513 IGQGSCG-TVYHAVWY--GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLCIVTEFLPRGS 588 (782)
Q Consensus 513 IG~G~~G-~Vy~~~~~--~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lv~E~~~ggs 588 (782)
+..|..| .||+.... +..+++|+.... ....+.+|..+|+.+. +--+.++++++.+++..|+|||+++|.+
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS-----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETH-----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCC-----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 4445544 69988653 457999986543 3456788999998884 3236788888888889999999999988
Q ss_pred HHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCC---------------------------------------------
Q 003978 589 LFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCN--------------------------------------------- 623 (782)
Q Consensus 589 L~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~--------------------------------------------- 623 (782)
+.+...... .....++.++...|..||...
T Consensus 107 ~~~~~~~~~-----~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (272)
T 4gkh_A 107 AFQVLEEYP-----DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWK 181 (272)
T ss_dssp HHHHHHHCG-----GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHH
T ss_pred ccccccCCH-----HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHH
Confidence 877654321 111223344455555555321
Q ss_pred -----------CCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 624 -----------PPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 624 -----------~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
..++|+|+.+.|||++.++.+-|+||+.+..
T Consensus 182 ~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 182 EMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 1279999999999999877677999998753
No 326
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.07 E-value=3.3e-06 Score=91.73 Aligned_cols=81 Identities=7% Similarity=0.022 Sum_probs=55.1
Q ss_pred eeEeeee-ccCCcEEEEEEEEc--------CCeEEEEEEeccC---CCHHHHHHHHHHHHHHHhCC-C--CceeEEeeee
Q 003978 507 LTIGEQI-GQGSCGTVYHAVWY--------GSDVAVKVFSRQE---YSDEVIHSFRQEVSLMKRLR-H--PNVLLFMGAV 571 (782)
Q Consensus 507 y~i~~~I-G~G~~G~Vy~~~~~--------~~~vAiK~~~~~~---~~~~~~~~~~~Ei~il~~l~-H--pnIv~l~~~~ 571 (782)
....+.| +.|....+|++... +..+++|+..... ... ...+.+|+.+|+.+. + -.+++++.+.
T Consensus 22 v~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~--~~~~~~E~~~l~~L~~~~~vpvP~v~~~~ 99 (357)
T 3ats_A 22 VTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFP--TYRLDHQFEVIRLVGELTDVPVPRVRWIE 99 (357)
T ss_dssp EEEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSS--CCCHHHHHHHHHHHHHHCCSCCCCEEEEE
T ss_pred eEEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCc--hhHHHHHHHHHHHHhhcCCCCCCcEEEEc
Confidence 3445778 88999999998765 6789999865432 100 134566888887773 2 2466777776
Q ss_pred ecC---CceeEEEeecCCCCH
Q 003978 572 TSP---QRLCIVTEFLPRGSL 589 (782)
Q Consensus 572 ~~~---~~~~lv~E~~~ggsL 589 (782)
... +..|+||||++|..+
T Consensus 100 ~~~~~~g~~~~v~e~l~G~~l 120 (357)
T 3ats_A 100 TTGDVLGTPFFLMDYVEGVVP 120 (357)
T ss_dssp CSSTTTSSCEEEEECCCCBCC
T ss_pred cCCCccCCceEEEEecCCCCh
Confidence 654 356899999987553
No 327
>4f3l_A Mclock, circadian locomoter output cycles protein kaput; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=97.98 E-value=4.7e-05 Score=83.18 Aligned_cols=63 Identities=14% Similarity=0.169 Sum_probs=55.2
Q ss_pred HHHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHH
Q 003978 129 DRQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDI 191 (782)
Q Consensus 129 ~~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l 191 (782)
+++...+++++++.|+++|.+|+|+|+|++++.++||+.+|++|+++.++++|++.......+
T Consensus 85 ~~~~~~~l~a~~~~i~v~~~~G~i~yvs~~~~~~lGy~~~el~g~~~~~~ihp~D~~~~~~~l 147 (361)
T 4f3l_A 85 EEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKIL 147 (361)
T ss_dssp HHHHHHHHHHTTEEEEEEETTSBEEEECTTHHHHHCCCHHHHTTSBGGGGSCGGGHHHHHHHH
T ss_pred HHHHHHHHHhcCceEEEEcCCccEEEEechhhhhcCCCHHHhcCCcHHHhcCHHHHHHHHHHh
Confidence 456678899999999999999999999999999999999999999999999998854443333
No 328
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.96 E-value=3.6e-05 Score=81.35 Aligned_cols=78 Identities=15% Similarity=0.140 Sum_probs=58.4
Q ss_pred ceeEeeeeccCCcEEEEEEEE-cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCC---ceeEEeeeeecCCceeEEE
Q 003978 506 DLTIGEQIGQGSCGTVYHAVW-YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHP---NVLLFMGAVTSPQRLCIVT 581 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~-~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~Hp---nIv~l~~~~~~~~~~~lv~ 581 (782)
.+.-.+.|+.|.++.||++.. .|+.++||+...... .....+.+|++.|+.+.+. .+++++++. ..++||
T Consensus 16 ~~~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~--~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvm 89 (288)
T 3d1u_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAP--ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM 89 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC--CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred CccceeeeCCcchhheEEEEeCCCCeEEEEecCCCCc--chhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEE
Confidence 345567899999999999986 467899999653321 1124678899999999764 577888764 368999
Q ss_pred eecCCCCH
Q 003978 582 EFLPRGSL 589 (782)
Q Consensus 582 E~~~ggsL 589 (782)
||++|+.+
T Consensus 90 e~l~g~~~ 97 (288)
T 3d1u_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EecccCCC
Confidence 99998763
No 329
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.95 E-value=5.9e-05 Score=80.71 Aligned_cols=138 Identities=16% Similarity=0.086 Sum_probs=77.8
Q ss_pred eeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC--CCceeEEeee------eecCCceeEEE
Q 003978 510 GEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR--HPNVLLFMGA------VTSPQRLCIVT 581 (782)
Q Consensus 510 ~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~--HpnIv~l~~~------~~~~~~~~lv~ 581 (782)
++.|+.|..+.||++...+..+++|+.... . ..+..|+.+++.|. .-.+++++.. ....+..+++|
T Consensus 37 ~~~l~gG~~n~~~~v~~~~~~~vlk~~~~~---~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~ 110 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHTDSGAVCLKRIHRP---E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVY 110 (346)
T ss_dssp EEECC----CEEEEEEETTEEEEEEEECSC---H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEE
T ss_pred eeeccccccCcEEEEEeCCCCEEEEecCCC---H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEE
Confidence 456777788999999887777999998752 2 22334555555442 1123344431 13456689999
Q ss_pred eecCCCCHH-----------HHH---hh--cCC--c---------chHHH------------------------------
Q 003978 582 EFLPRGSLF-----------RLL---QR--NTT--K---------LDWRR------------------------------ 604 (782)
Q Consensus 582 E~~~ggsL~-----------~~l---~~--~~~--~---------l~~~~------------------------------ 604 (782)
+|++|..+. ..| .. ... + ..+..
T Consensus 111 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 190 (346)
T 2q83_A 111 DWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQ 190 (346)
T ss_dssp ECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred EeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHH
Confidence 999885431 111 10 000 0 01110
Q ss_pred -HHHHHHHHHHHHHhhhc-----------CCCCeeecCCCCCcEEEcCCCcEEEEecCCCc
Q 003978 605 -RILMALDIARGVSYLHH-----------CNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSR 653 (782)
Q Consensus 605 -~~~i~~qll~aL~~LH~-----------~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~ 653 (782)
...+..++..++.+|+. ....++|+|+++.|||++.++.+.|+||+.+.
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 191 EIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 00111123345556642 22349999999999999888899999999775
No 330
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.90 E-value=3e-05 Score=85.55 Aligned_cols=77 Identities=21% Similarity=0.153 Sum_probs=49.4
Q ss_pred EeeeeccCCcEEEEEEEE--cCCeEEEEEEeccCC--CH---HHHHHHHHHHHHHHhCCC--C-ceeEEeeeeecCCcee
Q 003978 509 IGEQIGQGSCGTVYHAVW--YGSDVAVKVFSRQEY--SD---EVIHSFRQEVSLMKRLRH--P-NVLLFMGAVTSPQRLC 578 (782)
Q Consensus 509 i~~~IG~G~~G~Vy~~~~--~~~~vAiK~~~~~~~--~~---~~~~~~~~Ei~il~~l~H--p-nIv~l~~~~~~~~~~~ 578 (782)
..+.||.|.++.||++.. .++.++||....... .. .....+..|.++|+.+.. + .+++++.+ +....+
T Consensus 34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~ 111 (397)
T 2olc_A 34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAV 111 (397)
T ss_dssp EEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTE
T ss_pred EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccE
Confidence 356899999999999954 467899998653211 00 012345678888887732 3 34466654 344568
Q ss_pred EEEeecCCC
Q 003978 579 IVTEFLPRG 587 (782)
Q Consensus 579 lv~E~~~gg 587 (782)
+|||++++.
T Consensus 112 lvmE~l~g~ 120 (397)
T 2olc_A 112 TVMEDLSHL 120 (397)
T ss_dssp EEECCCTTS
T ss_pred EEEEeCCCc
Confidence 999999763
No 331
>4f3l_B BMAL1B; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=97.80 E-value=5.9e-05 Score=83.23 Aligned_cols=58 Identities=17% Similarity=0.248 Sum_probs=51.7
Q ss_pred HHHHHHHHHHcCceeEEEcCC-CcEEEecHHHHHHhCCChhhHcCCCcccccccccccc
Q 003978 129 DRQYLNILQSMGQSVHIFDLS-DRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFD 186 (782)
Q Consensus 129 ~~~~~~ile~~~d~I~v~D~d-G~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~ 186 (782)
+++...+++++++.|++++.+ |+|+|+|++++.++||+.+|++|+++.+++++++...
T Consensus 85 ~~~~~~ll~~~~gfi~v~~~~~G~i~yvs~~~~~~lG~~~~el~g~~~~~~ihp~D~~~ 143 (387)
T 4f3l_B 85 DELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAK 143 (387)
T ss_dssp HHHHHHHHHTCCSEEEEEETTTCBEEEECTTHHHHHSCCHHHHTTSBGGGGBCGGGHHH
T ss_pred HHHHHHHHhcCCCEEEEEecCCeEEEEEchhhHHHcCCCHHHHCCCcHHHhcCCCCHHH
Confidence 345567799999999999987 9999999999999999999999999999999987543
No 332
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.63 E-value=0.00018 Score=76.92 Aligned_cols=76 Identities=22% Similarity=0.181 Sum_probs=61.0
Q ss_pred eEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC---CCceeEEeeeeecCCceeEEEeec
Q 003978 508 TIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR---HPNVLLFMGAVTSPQRLCIVTEFL 584 (782)
Q Consensus 508 ~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~---HpnIv~l~~~~~~~~~~~lv~E~~ 584 (782)
.-.+.|+.|....+|++...+..+++|+..... ...+..|...|+.|. ...+++++.+....+..|+||||+
T Consensus 39 ~~~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~~-----~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l 113 (312)
T 3jr1_A 39 KHKEKLYSGEMNEIWLINDEVQTVFVKINERSY-----RSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL 113 (312)
T ss_dssp CEEEEECCSSSSEEEEEESSSCEEEEEEEEGGG-----HHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred eeeEEeCCccceeeeEEEECCCeEEEEeCCccc-----HHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence 345779999999999998878889999876432 456778988888873 356788888888778899999999
Q ss_pred CCCC
Q 003978 585 PRGS 588 (782)
Q Consensus 585 ~ggs 588 (782)
+|..
T Consensus 114 ~G~~ 117 (312)
T 3jr1_A 114 NKSK 117 (312)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 8865
No 333
>3rty_A Period circadian protein; PAS domain, signalling, timeless, circadian clock protein; 2.85A {Drosophila melanogaster} PDB: 1wa9_A 3gec_A
Probab=97.58 E-value=0.00016 Score=78.19 Aligned_cols=97 Identities=15% Similarity=0.141 Sum_probs=66.9
Q ss_pred eEEEc-CCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeE------------EEEEEEE-
Q 003978 143 VHIFD-LSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERW------------TGQFPAK- 208 (782)
Q Consensus 143 I~v~D-~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~------------~~e~~~~- 208 (782)
++|++ .+|+|+|+|+++..++||+.+|++|+++.+++++++.. .++..+..+.++ ....+..
T Consensus 6 ~~vv~~~~G~i~yvS~~~~~~LGy~~~el~G~s~~d~ihp~D~~----~f~~~L~~gl~~~~~~~~~~~~~rsffcR~~r 81 (339)
T 3rty_A 6 CCVISMHDGIVLYTTPSITDVLGYPRDMWLGRSFIDFVHLKDRA----TFASQITTGIPIAESRGSVPKDAKSTFCVMLR 81 (339)
T ss_dssp EEEEETTTCBEEEECTTHHHHHCCCTTSSTTSBGGGGBCHHHHH----HHHHHHHTTSCCC----------CCEEEEEEE
T ss_pred EEEEECCCcEEEEEChHHHHHcCCCHHHHCCCcHHHhcCHHHHH----HHHHHHhcCCCCCccccCCCCCCceEEEEEEe
Confidence 45677 69999999999999999999999999999999988743 355566655332 1111111
Q ss_pred ---------------cCCCCEEEEEEEEEEEECC---------CCCEEEEEEEEEehhH
Q 003978 209 ---------------TKTEERVLVVATNTPFYDD---------DGTLVGIVCVSTDSRP 243 (782)
Q Consensus 209 ---------------~kdG~~~~v~~~~~Pi~d~---------~G~v~g~v~i~rDITe 243 (782)
.+++..+|+..+..++.++ +|.+.+++.+..+|+.
T Consensus 82 r~~~l~s~gy~v~~~~~~~~p~~l~~~~~~~~~e~~~~~~~~~~g~~~~lv~~a~~i~s 140 (339)
T 3rty_A 82 RYRGLKSGGFGVIGRPVSYEPFRLGLTFREAPEEARPDNYMVSNGTNMLLVICATPIKS 140 (339)
T ss_dssp CCC-------------CCEEEEEEEEEEEECCCC----------CCCEEEEEEEEECCC
T ss_pred ccCCCCcCCcceecccccceeEEEEEEEeccccccccccccccCCceEEEEEEcccCCc
Confidence 1223344555555566554 5667788889999874
No 334
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.58 E-value=0.00022 Score=79.35 Aligned_cols=76 Identities=16% Similarity=0.112 Sum_probs=48.0
Q ss_pred CeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCC-CCCcccCcccccCCC---CCchhHHHHHHHHHHHHHc
Q 003978 625 PIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK-GTPQWMAPEVLRNEP---SDEKSDVYSFGVILWELAT 700 (782)
Q Consensus 625 ~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~-Gt~~y~aPE~l~~~~---~s~~sDIwSLG~ll~ellt 700 (782)
.++|+|++|.|||++.++ ++|+||+.+...+.......... -...|++|+...... .....++..+...+|+.++
T Consensus 233 ~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 311 (420)
T 2pyw_A 233 ALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLFN 311 (420)
T ss_dssp EEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHHH
T ss_pred eEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHHH
Confidence 399999999999999876 99999999876543221110000 013456666553211 1224566688888888776
Q ss_pred C
Q 003978 701 E 701 (782)
Q Consensus 701 G 701 (782)
+
T Consensus 312 ~ 312 (420)
T 2pyw_A 312 K 312 (420)
T ss_dssp H
T ss_pred H
Confidence 5
No 335
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.47 E-value=0.001 Score=66.67 Aligned_cols=138 Identities=12% Similarity=0.142 Sum_probs=94.5
Q ss_pred CCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCcEEEEecCCCcccccccccccCCC
Q 003978 587 GSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKHETYLTTKTGK 666 (782)
Q Consensus 587 gsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 666 (782)
.+|.++|...+.+++++++|.++.|.+.+|.-+-.... -..+=+.|..|+|..+|.|.+.+ ..+. .
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------~ 98 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQ-PRHRVRSAAQIRVWRDGAVTLAP-AADD------------A 98 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhccc-CCceecCCcceEEecCCceeccc-cccc------------c
Confidence 38999999989999999999999999999877621110 12333457899999999998753 1110 1
Q ss_pred CCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHhhccccccCCCCCCCHHHHHHHHHhhhh--
Q 003978 667 GTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHS-- 744 (782)
Q Consensus 667 Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~l~~LI~~cL~~-- 744 (782)
....+.+||... ...+.+.=|||||++||.-+--.+| ...+..++++|..||..|...
T Consensus 99 ~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~-------------------e~eE~eLS~~LE~LL~~Mt~~~~ 158 (229)
T 2yle_A 99 GEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK-------------------ENEERELSPPLEQLIDHMANTVE 158 (229)
T ss_dssp --------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC-------------------TTEEECCCHHHHHHHHHHTTCCC
T ss_pred cccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC-------------------cccchhhCHHHHHHHHHHHhccc
Confidence 123466888763 3446788999999999987643322 233457999999999999865
Q ss_pred -----------------------CCCCCCCHHHHHHH
Q 003978 745 -----------------------DPQCRPSFQELVDK 758 (782)
Q Consensus 745 -----------------------dP~~RPs~~ell~~ 758 (782)
.+..|++++++++.
T Consensus 159 d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~ 195 (229)
T 2yle_A 159 ADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKL 195 (229)
T ss_dssp --------------------CCSCCCCCCSHHHHHHH
T ss_pred ccccccccccccccccccccccccccCcCCHHHHHHH
Confidence 24578899998754
No 336
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.19 E-value=0.0009 Score=70.65 Aligned_cols=71 Identities=13% Similarity=0.136 Sum_probs=44.2
Q ss_pred eeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCce-eEEeeeeecCCceeEEEeec-CCC
Q 003978 510 GEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNV-LLFMGAVTSPQRLCIVTEFL-PRG 587 (782)
Q Consensus 510 ~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnI-v~l~~~~~~~~~~~lv~E~~-~gg 587 (782)
++.|+.|....+|++ ..+++|+...... ......+|+.+++.+...++ .+++... +..-++++||+ +|.
T Consensus 23 i~~l~gG~tN~~~~~----~~~vlR~~~~~~~---~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~ 93 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA----GDLCLRIPGKGTE---EYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQ 93 (301)
T ss_dssp CEEEESCSSEEEEEE----TTEEEEEECC-------CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCE
T ss_pred eeEcCCcccccccee----eeEEEECCCCCcc---ceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCc
Confidence 677889999999999 6799998764311 01112457777766632122 4555543 33457899999 664
Q ss_pred CH
Q 003978 588 SL 589 (782)
Q Consensus 588 sL 589 (782)
+|
T Consensus 94 ~l 95 (301)
T 3dxq_A 94 TM 95 (301)
T ss_dssp EC
T ss_pred cC
Confidence 43
No 337
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.16 E-value=0.0011 Score=70.92 Aligned_cols=140 Identities=16% Similarity=0.132 Sum_probs=72.1
Q ss_pred eeeccCCcEE-EEEEEEc-CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-C-CceeEEeeeeecCCceeEEEeecCC
Q 003978 511 EQIGQGSCGT-VYHAVWY-GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-H-PNVLLFMGAVTSPQRLCIVTEFLPR 586 (782)
Q Consensus 511 ~~IG~G~~G~-Vy~~~~~-~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-H-pnIv~l~~~~~~~~~~~lv~E~~~g 586 (782)
+.|+.|.... +|+.... +..+++|....... ..+..|+.+++.+. + -.+++++.+....+ +++||++.+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~-----~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~ 96 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG-----GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGD 96 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT-----CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCS
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC-----ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCC
Confidence 4565555444 6677664 67788886544321 12334666666553 1 23456666543333 789999977
Q ss_pred CCHHHHHhhcC-------------------------CcchHHHHH-------H-H------------HHHHHHHHHhh--
Q 003978 587 GSLFRLLQRNT-------------------------TKLDWRRRI-------L-M------------ALDIARGVSYL-- 619 (782)
Q Consensus 587 gsL~~~l~~~~-------------------------~~l~~~~~~-------~-i------------~~qll~aL~~L-- 619 (782)
..+.+++.... ..+...... . + ...+...+..|
T Consensus 97 ~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~ 176 (333)
T 3csv_A 97 ALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILS 176 (333)
T ss_dssp CBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred cchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 67765543210 001111000 0 0 00111112222
Q ss_pred --hcCCCCeeecCCCCCcEEEcCC----CcEEEEecCCCccccc
Q 003978 620 --HHCNPPIIHRDLKSSNLLVDKH----WTVKVGDFGLSRLKHE 657 (782)
Q Consensus 620 --H~~~~~ivHrDIKp~NILl~~~----~~vkL~DFGla~~~~~ 657 (782)
......++|+|+.+.|||++.+ +.+.|+||+.+.....
T Consensus 177 ~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~~ 220 (333)
T 3csv_A 177 AQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHR 220 (333)
T ss_dssp HHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEECT
T ss_pred hcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCCC
Confidence 1112349999999999999874 6799999999875443
No 338
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.13 E-value=0.0015 Score=68.45 Aligned_cols=80 Identities=15% Similarity=0.103 Sum_probs=56.1
Q ss_pred cccceeEeeeeccCCcEEEEEEEE-cCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-C--CceeEEeeeeecCCcee
Q 003978 503 LWEDLTIGEQIGQGSCGTVYHAVW-YGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-H--PNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 503 ~~~~y~i~~~IG~G~~G~Vy~~~~-~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-H--pnIv~l~~~~~~~~~~~ 578 (782)
....+.-++.+|.|..+.||++.. .|+.|++|+........ ...+..|+..|+.|. . --+++++++. .-+
T Consensus 13 ~G~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~--~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~ 86 (288)
T 3f7w_A 13 TGREVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPAL--DGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRT 86 (288)
T ss_dssp HCCCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCC--TTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTE
T ss_pred cCCCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcch--hhHHHHHHHHHHHHHhhCCCCcceEEecc----Cce
Confidence 345667788999999999999987 57899999865433211 235678999888874 2 1245566543 347
Q ss_pred EEEeecCCCC
Q 003978 579 IVTEFLPRGS 588 (782)
Q Consensus 579 lv~E~~~ggs 588 (782)
+||||+.++.
T Consensus 87 lv~e~l~~~~ 96 (288)
T 3f7w_A 87 LAMEWVDERP 96 (288)
T ss_dssp EEEECCCCCC
T ss_pred EEEEeecccC
Confidence 8999997654
No 339
>1oj5_A Steroid receptor coactivator 1A; transcriptional coactivator, complex, LXXLL motif, transcriptional regulation; 2.2A {Mus musculus} SCOP: d.110.3.8
Probab=97.12 E-value=0.00062 Score=62.34 Aligned_cols=81 Identities=9% Similarity=-0.019 Sum_probs=69.2
Q ss_pred EcCCCcEEEecHHHHHHhCCCh--hhHcCCCccccccccccc--cHHHHHHHHHHcCCeEEEEEEEEcCCCCEEEEEEEE
Q 003978 146 FDLSDRIIYWNRSAELLYGYSA--EEALGQDAIELLTDGRDF--DVAYDIVHRIKMGERWTGQFPAKTKTEERVLVVATN 221 (782)
Q Consensus 146 ~D~dG~Ii~vN~aae~l~Gys~--eEliG~~~~~l~~~~~~~--~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~~v~~~~ 221 (782)
.|.+|+|+|+.....+ .+|.. +||+|+.+.+++++++.. ...+...+++..|+....-++++.++|..+|+....
T Consensus 13 h~~dGKf~~vDq~~~r-~~~~~g~qdLlGrsiy~f~H~~D~~~s~l~~h~~~vl~~Gq~~S~~YRfr~k~g~~V~~qT~s 91 (132)
T 1oj5_A 13 QDTTGKIISIDTSSLR-AAGRTGWEDLVRKCIYAFFQPQGREPSYARQLFQEVMTRGTASSPSYRFILNDGTMLSAHTRC 91 (132)
T ss_dssp ECTTCCEEEEECHHHH-TTCCSCHHHHHHHHHHHHTSCBTTBCCHHHHHHHHHHHHSEEECCCEEEECTTSCEEEEEEEE
T ss_pred ecCCCcEEEEeccccc-ccccccHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHcCCccccceEEEecCCcEEEEEEEE
Confidence 6789999999999874 77777 999999999999998854 455567778888888888899999999999999998
Q ss_pred EEEECC
Q 003978 222 TPFYDD 227 (782)
Q Consensus 222 ~Pi~d~ 227 (782)
..+++.
T Consensus 92 k~f~np 97 (132)
T 1oj5_A 92 KLCYPQ 97 (132)
T ss_dssp EEECC-
T ss_pred EEecCC
Confidence 888874
No 340
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.06 E-value=0.0018 Score=68.80 Aligned_cols=144 Identities=17% Similarity=0.144 Sum_probs=79.0
Q ss_pred eeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCc--eeEEeee------eecCCcee
Q 003978 507 LTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPN--VLLFMGA------VTSPQRLC 578 (782)
Q Consensus 507 y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~Hpn--Iv~l~~~------~~~~~~~~ 578 (782)
..-.+.|+.|....||++...+..+++|+...... ...+..|+.+++.+...+ +++++.. ....+..+
T Consensus 24 ~~~~~~i~~G~~n~~~~v~~~~g~~vlk~~~~~~~----~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~ 99 (322)
T 2ppq_A 24 LTSYKGIAEGVENSNFLLHTTKDPLILTLYEKRVE----KNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPA 99 (322)
T ss_dssp EEEEEEECC---EEEEEEEESSCCEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEE
T ss_pred ceEeeccCCCcccceEEEEeCCccEEEEEeCCCCC----HHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEE
Confidence 34456788899899999988777899999875311 123455777776663111 3333322 12235678
Q ss_pred EEEeecCCCCHH-----------HHH---hhc----CCc-------chHHHHHH------------HHHHHHHHHHhhhc
Q 003978 579 IVTEFLPRGSLF-----------RLL---QRN----TTK-------LDWRRRIL------------MALDIARGVSYLHH 621 (782)
Q Consensus 579 lv~E~~~ggsL~-----------~~l---~~~----~~~-------l~~~~~~~------------i~~qll~aL~~LH~ 621 (782)
++|+|++|..+. ..+ ... ..+ ..+...+. +...+...+.++..
T Consensus 100 ~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~ 179 (322)
T 2ppq_A 100 ALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAA 179 (322)
T ss_dssp EEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHh
Confidence 999999875421 111 100 000 01111000 00012333444432
Q ss_pred C-----CCCeeecCCCCCcEEEcCCCcEEEEecCCCcc
Q 003978 622 C-----NPPIIHRDLKSSNLLVDKHWTVKVGDFGLSRL 654 (782)
Q Consensus 622 ~-----~~~ivHrDIKp~NILl~~~~~vkL~DFGla~~ 654 (782)
. ...++|+|+++.|||++.++.+.|+||+.+..
T Consensus 180 ~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 180 HWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp HCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 1 12399999999999999876568999998754
No 341
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.73 E-value=0.0025 Score=71.14 Aligned_cols=71 Identities=14% Similarity=0.200 Sum_probs=47.8
Q ss_pred EeeeeccCCcEEEEEEEEc---------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCc-eeEEeeeeecCCcee
Q 003978 509 IGEQIGQGSCGTVYHAVWY---------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPN-VLLFMGAVTSPQRLC 578 (782)
Q Consensus 509 i~~~IG~G~~G~Vy~~~~~---------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~Hpn-Iv~l~~~~~~~~~~~ 578 (782)
-++.|+.|....||++... +..+++|+..... . ...+.+|..+++.+...+ .+++++.+.. .
T Consensus 77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~-~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g 148 (429)
T 1nw1_A 77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-T---ESHLVAESVIFTLLSERHLGPKLYGIFSG----G 148 (429)
T ss_dssp EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC-C---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC-c---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----C
Confidence 3567888999999999874 4679999984321 2 123446888888774223 3567766542 3
Q ss_pred EEEeecCCC
Q 003978 579 IVTEFLPRG 587 (782)
Q Consensus 579 lv~E~~~gg 587 (782)
+||||++|.
T Consensus 149 ~v~e~l~G~ 157 (429)
T 1nw1_A 149 RLEEYIPSR 157 (429)
T ss_dssp EEECCCCEE
T ss_pred EEEEEeCCc
Confidence 899999763
No 342
>4dj2_A Period circadian protein homolog 1; PAS domains, circadian clock protein, protein binding; 2.75A {Mus musculus}
Probab=96.63 E-value=0.00081 Score=71.96 Aligned_cols=62 Identities=19% Similarity=0.162 Sum_probs=52.6
Q ss_pred ccCcCHHHHHHH-----HHHcCceeEEEcCC-CcEEEecHHHHHHhCCChhhHcCCCccccccccccc
Q 003978 124 AFNFTDRQYLNI-----LQSMGQSVHIFDLS-DRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDF 185 (782)
Q Consensus 124 a~~l~~~~~~~i-----le~~~d~I~v~D~d-G~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~ 185 (782)
+.-++++.|..+ |+++..=++|+..+ |+|+|+++.+..++||+.+|++|+++.+++++++..
T Consensus 15 ~~~~s~eel~~l~~e~lLqaldGF~~vvs~~~G~i~yvS~sv~~~Lg~~~~~l~g~s~~d~iHp~D~~ 82 (320)
T 4dj2_A 15 MSTYTLEELEHITSEYTLRNQDTFSVAVSFLTGRIVYISEQAGVLLRCKRDVFRGARFSELLAPQDVG 82 (320)
T ss_dssp CSEECHHHHHHHHHHHTTSCSSEEEEEEETTTCBEEEECTHHHHHHTSCSTTTTTSBGGGGBCHHHHH
T ss_pred ccccCHHHHHHHHHHHHHhccCCEEEEEECCCceEEEECcHHHHHhCcCHHHHcCCcHHHhcCHHHHH
Confidence 445678888877 66776666778875 999999999999999999999999999999998753
No 343
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.48 E-value=0.02 Score=60.66 Aligned_cols=73 Identities=11% Similarity=0.050 Sum_probs=46.2
Q ss_pred eeeccCCcEEEEEEEEc-CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCC--ceeEEeee-----eecCCceeEEEe
Q 003978 511 EQIGQGSCGTVYHAVWY-GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHP--NVLLFMGA-----VTSPQRLCIVTE 582 (782)
Q Consensus 511 ~~IG~G~~G~Vy~~~~~-~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~Hp--nIv~l~~~-----~~~~~~~~lv~E 582 (782)
..|+ |....||++... |+.+++|+........ ..+..|..+++.+... .+++++.. ....+..+++|+
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~---~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~ 107 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERWTA---DQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFP 107 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTSCH---HHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCCCH---HHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEE
Confidence 4566 788899998764 5579999987543333 3455677777766321 24444443 122445678999
Q ss_pred ecCCC
Q 003978 583 FLPRG 587 (782)
Q Consensus 583 ~~~gg 587 (782)
+++|.
T Consensus 108 ~i~G~ 112 (328)
T 1zyl_A 108 SVGGR 112 (328)
T ss_dssp CCCCE
T ss_pred ecCCC
Confidence 99874
No 344
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.41 E-value=0.0037 Score=70.26 Aligned_cols=73 Identities=14% Similarity=0.114 Sum_probs=47.3
Q ss_pred EeeeeccCCcEEEEEEEEcC--CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCce-eEEeeeeecCCceeEEEeecC
Q 003978 509 IGEQIGQGSCGTVYHAVWYG--SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNV-LLFMGAVTSPQRLCIVTEFLP 585 (782)
Q Consensus 509 i~~~IG~G~~G~Vy~~~~~~--~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnI-v~l~~~~~~~~~~~lv~E~~~ 585 (782)
-++.|+.|-...+|++...+ ..+++|+...... ... ...+|..+++.|...++ +++++.+. + .+||||++
T Consensus 112 ~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~--~~i-dR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~ 184 (458)
T 2qg7_A 112 EFQIINGGITNILIKVKDMSKQAKYLIRLYGPKTD--EII-NREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMD 184 (458)
T ss_dssp EEEEECC--CEEEEEEEETTTTEEEEEEEECC-CC--SCS-CHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCC
T ss_pred EEEEcCCCeEeEEEEEEECCCCceEEEEECCCChh--hhc-CHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeC
Confidence 35678889999999999876 7899998754221 000 11468888888864444 56777663 2 36999998
Q ss_pred CCC
Q 003978 586 RGS 588 (782)
Q Consensus 586 ggs 588 (782)
|.+
T Consensus 185 G~~ 187 (458)
T 2qg7_A 185 GYA 187 (458)
T ss_dssp SEE
T ss_pred Ccc
Confidence 743
No 345
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.37 E-value=0.017 Score=62.10 Aligned_cols=32 Identities=22% Similarity=0.347 Sum_probs=28.0
Q ss_pred CeeecCCCCCcEEEcCCCcEEEEecCCCcccc
Q 003978 625 PIIHRDLKSSNLLVDKHWTVKVGDFGLSRLKH 656 (782)
Q Consensus 625 ~ivHrDIKp~NILl~~~~~vkL~DFGla~~~~ 656 (782)
.++|+|+.+.||+++.++.+.|+||+.+....
T Consensus 207 ~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~~ 238 (339)
T 3i1a_A 207 VLCHSDIHAGNVLVGNEESIYIIDWDEPMLAP 238 (339)
T ss_dssp EEECSCCCGGGEEECGGGCEEECCCSSCEEEC
T ss_pred eeEeCCCCcCCEEEeCCCeEEEEECCCCeeCC
Confidence 49999999999999988889999999876543
No 346
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.28 E-value=0.0051 Score=67.37 Aligned_cols=141 Identities=13% Similarity=0.164 Sum_probs=79.1
Q ss_pred ceeEeeeeccCCcEEEEEEEEc---------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCC
Q 003978 506 DLTIGEQIGQGSCGTVYHAVWY---------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQ 575 (782)
Q Consensus 506 ~y~i~~~IG~G~~G~Vy~~~~~---------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~ 575 (782)
.++ ++.|..|-...+|++... +..+++|+...... ....+.+|.++++.+. +.-..++++.+..
T Consensus 52 ~l~-v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~---~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~-- 125 (379)
T 3feg_A 52 ELR-VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQ---GVDSLVLESVMFAILAERSLGPQLYGVFPE-- 125 (379)
T ss_dssp GCC-CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---C---CHHHHHHHHHHHHHHHHTTSSCCEEEEETT--
T ss_pred ceE-EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccc---hHHHHHHHHHHHHHHHhcCCCCeEEEEcCC--
Confidence 444 356777888899999863 36799998633211 1244557888888774 3223567776653
Q ss_pred ceeEEEeecCCCCHH--------------HHHhh-c------CCcc--hHHHHHHHHHHHHH------------------
Q 003978 576 RLCIVTEFLPRGSLF--------------RLLQR-N------TTKL--DWRRRILMALDIAR------------------ 614 (782)
Q Consensus 576 ~~~lv~E~~~ggsL~--------------~~l~~-~------~~~l--~~~~~~~i~~qll~------------------ 614 (782)
.+||||++|..|. +.|.+ + .... -+..+..+..++-.
T Consensus 126 --g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~ 203 (379)
T 3feg_A 126 --GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLK 203 (379)
T ss_dssp --EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHH
T ss_pred --ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHH
Confidence 3899999875431 11110 0 0111 12333333333211
Q ss_pred -HHHh----hhc--CCCCeeecCCCCCcEEEcCC----CcEEEEecCCCcc
Q 003978 615 -GVSY----LHH--CNPPIIHRDLKSSNLLVDKH----WTVKVGDFGLSRL 654 (782)
Q Consensus 615 -aL~~----LH~--~~~~ivHrDIKp~NILl~~~----~~vkL~DFGla~~ 654 (782)
.+.. |.. ....++|+|+.+.|||++.+ +.+.|+||..+..
T Consensus 204 ~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 204 DEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 1222 211 12348999999999999876 7899999998753
No 347
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.26 E-value=0.0027 Score=69.02 Aligned_cols=72 Identities=11% Similarity=0.133 Sum_probs=43.2
Q ss_pred eeeeccCCcEEEEEEEEcC----------CeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCc-eeEEeeeeecCCcee
Q 003978 510 GEQIGQGSCGTVYHAVWYG----------SDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPN-VLLFMGAVTSPQRLC 578 (782)
Q Consensus 510 ~~~IG~G~~G~Vy~~~~~~----------~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~Hpn-Iv~l~~~~~~~~~~~ 578 (782)
.+.|+.|..-.||++...+ ..+++|+...... .......|..+++.+...+ ++++++... -+
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~---~~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~ 110 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD---ELYNTISEFEVYKTMSKYKIAPQLLNTFN----GG 110 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG---GTSCHHHHHHHHHHHHHTTSSCCEEEEET----TE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc---ceecHHHHHHHHHHHHhcCCCCceEEecC----Cc
Confidence 4567888888999998754 6789998754211 1112356777777774223 446665542 37
Q ss_pred EEEeecCCCC
Q 003978 579 IVTEFLPRGS 588 (782)
Q Consensus 579 lv~E~~~ggs 588 (782)
+||||++|..
T Consensus 111 ~v~e~i~G~~ 120 (369)
T 3c5i_A 111 RIEEWLYGDP 120 (369)
T ss_dssp EEEECCCSEE
T ss_pred EEEEEecCCc
Confidence 8999998743
No 348
>4dj3_A Period circadian protein homolog 3; PAS domain, circadian rhythm, protein binding; 2.50A {Mus musculus}
Probab=96.12 E-value=0.0016 Score=69.50 Aligned_cols=52 Identities=12% Similarity=0.109 Sum_probs=46.5
Q ss_pred HHHHcCceeEEEcCC-CcEEEecHHHHHHhCCChhhHcCCCcccccccccccc
Q 003978 135 ILQSMGQSVHIFDLS-DRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFD 186 (782)
Q Consensus 135 ile~~~d~I~v~D~d-G~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~ 186 (782)
+|+++..=++|++.+ |+|+|+++++..++||+.+|++|+++.+++++.+...
T Consensus 31 ~L~aldgF~~vvs~~~G~i~yvS~~~~~~Lg~~~~el~g~s~~d~ihp~D~~~ 83 (317)
T 4dj3_A 31 TSKNTDTFAAVFSFLSGRLVHISEQAALILNSKRGFLKSVHFVDLLAPQDVRA 83 (317)
T ss_dssp HTSCTTEEEEEEETTTCBEEEECTTHHHHTTCCHHHHHTSBGGGGBCGGGHHH
T ss_pred HHhccCCEEEEEEcCCcEEEEECCHHHHHcCCCHHHHcCCchhhhcChhhHHH
Confidence 478887777888886 9999999999999999999999999999999988543
No 349
>3gdi_A Period circadian protein homolog 2; tandem PAS domains, biological rhythms, cytoplasm, nucleus, phosphoprotein, transcription; 2.40A {Mus musculus}
Probab=95.82 E-value=0.0024 Score=68.00 Aligned_cols=52 Identities=12% Similarity=0.166 Sum_probs=37.5
Q ss_pred HHHHHcCceeEEEcCC-CcEEEecHHHHHHhCCChhhHcCCCccccccccccc
Q 003978 134 NILQSMGQSVHIFDLS-DRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDF 185 (782)
Q Consensus 134 ~ile~~~d~I~v~D~d-G~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~ 185 (782)
.+|+++..=++|++.+ |+|+|+++++..++||+.+|++|+++.+++++++..
T Consensus 19 lll~a~dgF~~vvs~~~G~i~yvS~s~~~~Lg~~~~el~g~s~~d~iHp~D~~ 71 (309)
T 3gdi_A 19 YIVKNADMFAVAVSLVSGKILYISNQVASIFHCKKDAFSDAKFVEFLAPHDVS 71 (309)
T ss_dssp ----CTTEEEEEECTTTCBEEEECTTTTTTC-------CCSBGGGGBCTTTHH
T ss_pred HHHHhcCCEEEEEECCCceEEEECCHHHHHcCCCHHHHcCCchhhccCHhHHH
Confidence 4678888888889986 999999999999999999999999999999998853
No 350
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.18 E-value=0.053 Score=59.69 Aligned_cols=79 Identities=13% Similarity=0.200 Sum_probs=47.6
Q ss_pred cceeEeeeeccCCcEEEEEEEEcC---------CeEEEEEEeccCC------------CHH----HHHHHHHHHHHHHhC
Q 003978 505 EDLTIGEQIGQGSCGTVYHAVWYG---------SDVAVKVFSRQEY------------SDE----VIHSFRQEVSLMKRL 559 (782)
Q Consensus 505 ~~y~i~~~IG~G~~G~Vy~~~~~~---------~~vAiK~~~~~~~------------~~~----~~~~~~~Ei~il~~l 559 (782)
+++.+ +.|..|-...+|++...+ ..|.+++.-.... +.+ ....+..|..+++.+
T Consensus 53 ~~i~v-~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L 131 (401)
T 3f2s_A 53 DEFHI-SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAIL 131 (401)
T ss_dssp GGCEE-EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHH
T ss_pred hheEE-EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHH
Confidence 34444 456668888999998642 5689998754321 000 011233588888877
Q ss_pred C-CCceeEEeeeeecCCceeEEEeecCCCC
Q 003978 560 R-HPNVLLFMGAVTSPQRLCIVTEFLPRGS 588 (782)
Q Consensus 560 ~-HpnIv~l~~~~~~~~~~~lv~E~~~ggs 588 (782)
. +--..++++++.. .+|+||++|-+
T Consensus 132 ~~~Gi~Pkl~~~~~~----G~i~efI~G~~ 157 (401)
T 3f2s_A 132 AERSLGPKLYGIFPQ----GRLEQFIPSRR 157 (401)
T ss_dssp HHTTSSCCEEEEETT----EEEEECCCEEE
T ss_pred HhcCCCCeEEEEeCC----CeEEEecCCcc
Confidence 4 3335677777653 28999998643
No 351
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.14 E-value=0.16 Score=56.20 Aligned_cols=73 Identities=10% Similarity=0.123 Sum_probs=47.0
Q ss_pred EeeeeccCCcEEEEEEEEc---------CCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCcee
Q 003978 509 IGEQIGQGSCGTVYHAVWY---------GSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLR-HPNVLLFMGAVTSPQRLC 578 (782)
Q Consensus 509 i~~~IG~G~~G~Vy~~~~~---------~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~ 578 (782)
-++.|..|-...+|++... +..+++|+..... . ..-...+|..+++.+. +.-.+++++.+. -+
T Consensus 74 ~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t--~-~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~ 146 (424)
T 3mes_A 74 EVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV--G-KFYDSKVELDVFRYLSNINIAPNIIADFP----EG 146 (424)
T ss_dssp EEEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC----CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TE
T ss_pred EEEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc--c-hhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CC
Confidence 3466777888999999876 5789999864422 1 1112245777777774 222456665432 37
Q ss_pred EEEeecCCCC
Q 003978 579 IVTEFLPRGS 588 (782)
Q Consensus 579 lv~E~~~ggs 588 (782)
+||||++|..
T Consensus 147 ~I~efI~G~~ 156 (424)
T 3mes_A 147 RIEEFIDGEP 156 (424)
T ss_dssp EEEECCCSEE
T ss_pred EEEEEeCCcc
Confidence 8999998854
No 352
>2ool_A Sensor protein; bacteriophytochrome, photoconversion, photoreceptor, biliver signaling protein; HET: LBV; 2.20A {Rhodopseudomonas palustris} SCOP: d.110.2.1 d.110.3.9
Probab=90.53 E-value=0.36 Score=51.66 Aligned_cols=75 Identities=16% Similarity=0.102 Sum_probs=49.7
Q ss_pred eEEEcCC-CcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCe---EEEEEEEEcC-CCCEEEE
Q 003978 143 VHIFDLS-DRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGER---WTGQFPAKTK-TEERVLV 217 (782)
Q Consensus 143 I~v~D~d-G~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~---~~~e~~~~~k-dG~~~~v 217 (782)
++++|.+ ++|+.+|..+++++|++.++++|+++.+++++.. ...+.+.+..+.. ....+.+... +|..||+
T Consensus 45 Ll~~~~~~~~i~~~S~N~~~~lg~~~~~llG~~l~~ll~~~~----~~~l~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~ 120 (337)
T 2ool_A 45 LFVVSETDLRIASVSANVEDLLRQPPASLLNVPIAHYLTAAS----AARLTHALHGGDPAAINPIRLDVVTPDGERAFNG 120 (337)
T ss_dssp EEEECTTTCBEEEEETTHHHHHSSCGGGGTTCBGGGGBCHHH----HHHHHHHHCC----CCCSEEEEEEETTEEEEEEE
T ss_pred EEEEECCCCEEEEEehhHHHHHCcCHHHHcCCCHHHHcCHHH----HHHHHHHHhcCCccccCcEEEEEeccCCCeEEEE
Confidence 4557764 8999999999999999999999999999998654 2234455543321 1223333333 3566776
Q ss_pred EEEE
Q 003978 218 VATN 221 (782)
Q Consensus 218 ~~~~ 221 (782)
.+..
T Consensus 121 ~~Hr 124 (337)
T 2ool_A 121 ILHR 124 (337)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 353
>4dah_A Sporulation kinase D; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology, PAS-like fold; 2.03A {Bacillus subtilis} PDB: 4dbj_A 4dbi_A 4dak_A 3fos_A
Probab=90.16 E-value=2.3 Score=41.51 Aligned_cols=96 Identities=4% Similarity=-0.004 Sum_probs=61.3
Q ss_pred HHHHHHHHHcCc--eeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEE
Q 003978 130 RQYLNILQSMGQ--SVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPA 207 (782)
Q Consensus 130 ~~~~~ile~~~d--~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~ 207 (782)
+.+..+++..+. .|+++|.+|.++..... ...+.+ ......+..++..++.+..+...
T Consensus 58 ~~L~~~~~~~~~~~~i~i~d~~G~~~~~~~~----------~~~~~~----------~~~r~~f~~a~~~~~~~is~~~~ 117 (217)
T 4dah_A 58 SILEKTFDSEPRFSGLYFLNAKGDVTASTTE----------LKTKVN----------LADRSFFIKAKETKKTVISDSYS 117 (217)
T ss_dssp HHHHHHHTTCTTEEEEEEEETTCBEEEESSC----------CSSCCB----------CTTSHHHHHHHHHCSCEECCCEE
T ss_pred HHHHHHHhcCCcccEEEEECCCCcEEEecCC----------CCCCCC----------cchhHHHHHHHhcCCcEEeceEE
Confidence 335555554443 78899999998876530 001111 11122355667767765555544
Q ss_pred EcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHH
Q 003978 208 KTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQET 247 (782)
Q Consensus 208 ~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~ 247 (782)
-..+|. ++.....||++.+|+++|++++..++....+.
T Consensus 118 ~~~~g~--~~i~ia~pi~~~~g~~~Gvl~~~i~l~~l~~~ 155 (217)
T 4dah_A 118 SRITGQ--PIFTICVPVLDSKRNVTDYLVAAIQIDYLKNL 155 (217)
T ss_dssp CTTTCS--EEEEEEEEEECTTSCEEEEEEEEEEHHHHHHH
T ss_pred cCCCCC--EEEEEEEEEECCCCCEEEEEEEEEcHHHHHHH
Confidence 455665 56677789999899999999999998876654
No 354
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=88.00 E-value=0.12 Score=56.82 Aligned_cols=29 Identities=24% Similarity=0.394 Sum_probs=24.8
Q ss_pred eeecCCCCCcEEE------cCCCcEEEEecCCCcc
Q 003978 626 IIHRDLKSSNLLV------DKHWTVKVGDFGLSRL 654 (782)
Q Consensus 626 ivHrDIKp~NILl------~~~~~vkL~DFGla~~ 654 (782)
++|+|+.+.|||+ +.+..++++||.+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 6799999999999 3456799999998864
No 355
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=84.19 E-value=1.9 Score=42.82 Aligned_cols=116 Identities=13% Similarity=0.108 Sum_probs=76.8
Q ss_pred CCCceeEEeeeeecCCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc
Q 003978 560 RHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVSYLHHCNPPIIHRDLKSSNLLVD 639 (782)
Q Consensus 560 ~HpnIv~l~~~~~~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~~LH~~~~~ivHrDIKp~NILl~ 639 (782)
.||+++.. .+-+.++.+.+.++.-+.+.=+..+. .++....+.++.+|+....+++. =+|--|+|+||+++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik----~~~~~eKlr~l~ni~~l~~~~~~----r~tf~L~P~NL~f~ 113 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK----SFTKNEKLRYLLNIKNLEEVNRT----RYTFVLAPDELFFT 113 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG----GSCHHHHHHHHHHGGGGGGGGGS----SEECCCSGGGEEEC
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH----hcCHHHHHHHHHHHHHHHHHhcC----ceEEEEecceEEEc
Confidence 58888866 45566666666665543221122232 36677888888898887766553 37889999999999
Q ss_pred CCCcEEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCC
Q 003978 640 KHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWD 706 (782)
Q Consensus 640 ~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~ 706 (782)
.++.+++.-.|+-.. ++|. ..+...=+-.+=|++..+++++..|.
T Consensus 114 ~~~~p~i~~RGik~~-----------------l~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 114 RDGLPIAKTRGLQNV-----------------VDPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp TTSCEEESCCEETTT-----------------BSCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred CCCCEEEEEccCccC-----------------CCCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999975554211 1221 12333344567889999999998874
No 356
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=83.99 E-value=9.2 Score=34.30 Aligned_cols=87 Identities=15% Similarity=0.160 Sum_probs=50.3
Q ss_pred HHHHHHHHcC-ceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEc
Q 003978 131 QYLNILQSMG-QSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKT 209 (782)
Q Consensus 131 ~~~~ile~~~-d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~ 209 (782)
.++.+-+... +-|+++|.+|.+++... .+.+|+++.. ... +..++ .|+.+.... ..
T Consensus 40 ~~~~~~~~~~~~~i~v~d~~G~~~a~~~----------~~~iG~~~~~---~~~-------~~~al-~G~~~~~~~--~g 96 (131)
T 1p0z_A 40 LIDPMRSFSDATYITVGDASGQRLYHVN----------PDEIGKSMEG---GDS-------DEALI-NAKSYVSVR--KG 96 (131)
T ss_dssp HHHHHHHHSCCSEEEEEETTSBEEECSS----------GGGTTSBCCS---SCC-------HHHHH-HCCCEEEEE--EE
T ss_pred HHHHHHHhcCCCEEEEEcCCCcEEEecC----------hhhCCCcccC---CCc-------HHHHh-CCCeEEEEE--Ec
Confidence 3444433333 57888999998776432 3447775431 111 33445 455544322 11
Q ss_pred CCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhH
Q 003978 210 KTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRP 243 (782)
Q Consensus 210 kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITe 243 (782)
..| +......||++.+|+++|+|.+-.++..
T Consensus 97 ~~g---~~~~~~~PV~~~~g~viGvv~vg~~l~~ 127 (131)
T 1p0z_A 97 SLG---SSLRGKSPIQDATGKVIGIVSVGYTIEQ 127 (131)
T ss_dssp TTE---EEEEEEEEEECTTCCEEEEEEEEEEGGG
T ss_pred cce---eeEEEEEeEECCCCCEEEEEEEEEEhHH
Confidence 222 2233444999888999999999888753
No 357
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=80.90 E-value=0.12 Score=58.12 Aligned_cols=61 Identities=16% Similarity=0.143 Sum_probs=17.4
Q ss_pred eEeeeeccCCcEEEEEEEEcC--CeEEE------EEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeeee
Q 003978 508 TIGEQIGQGSCGTVYHAVWYG--SDVAV------KVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGAV 571 (782)
Q Consensus 508 ~i~~~IG~G~~G~Vy~~~~~~--~~vAi------K~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~ 571 (782)
.+.++|| ||.||++.+.+ .+||+ |..+......+....+.+|..+++.++|||+++.+++.
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 4556777 99999998865 47888 66654444455566788899999999999999988764
No 358
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=80.48 E-value=5.8 Score=39.46 Aligned_cols=115 Identities=14% Similarity=0.125 Sum_probs=75.8
Q ss_pred CCCceeEEeeeeecCCceeEEEeecCCCCHHHHHhhcCCcchHHHHHHHHHHHHHHHH-hhhcCCCCeeecCCCCCcEEE
Q 003978 560 RHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRILMALDIARGVS-YLHHCNPPIIHRDLKSSNLLV 638 (782)
Q Consensus 560 ~HpnIv~l~~~~~~~~~~~lv~E~~~ggsL~~~l~~~~~~l~~~~~~~i~~qll~aL~-~LH~~~~~ivHrDIKp~NILl 638 (782)
.||++ --.+-..++.+.+.++.-+++.=+..++ .++....+.++.+|+.... +++. -+|--|+|+||++
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~----~~~~~eKlrll~nl~~L~~~~~~~----r~tf~l~P~NL~f 117 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR----KTTLLSRIRAAIHLVSKVKHHSAR----RLIFIVCPENLMF 117 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH----TSCHHHHHHHHHHHHHHHSSCCSS----SEECCCCGGGEEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH----hcCHHHHHHHHHHHHHHHHHhhhC----ceeEEEeCceEEE
Confidence 57887 3333366677777776654443333443 3667788888888888777 5543 4888999999999
Q ss_pred cCCCcEEEEecCCCcccccccccccCCCCCCcccCcccccCCCCCchhHHHHHHHHHHHHHcCCCCCC
Q 003978 639 DKHWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWD 706 (782)
Q Consensus 639 ~~~~~vkL~DFGla~~~~~~~~~~~~~~Gt~~y~aPE~l~~~~~s~~sDIwSLG~ll~elltG~~Pf~ 706 (782)
+.++.++|.-.|+-. -++|.. .+...=+-.+=|++..++.++..|.
T Consensus 118 ~~~~~p~i~hRGi~~-----------------~lpP~e-----~~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 118 NRALEPFFLHVGVKE-----------------SLPPDE-----WDDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp CTTCCEEESCCEETT-----------------TBSSCS-----CCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred eCCCcEEEEEcCCcc-----------------cCCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999997665421 122221 2222233467788889998888774
No 359
>4ew7_A Conjugative transfer: regulation; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology; 1.67A {Salmonella enterica subsp}
Probab=78.77 E-value=14 Score=31.74 Aligned_cols=93 Identities=15% Similarity=0.123 Sum_probs=53.2
Q ss_pred HHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEcCC
Q 003978 132 YLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKT 211 (782)
Q Consensus 132 ~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kd 211 (782)
.+.|..+.|.+|.|-+....|+|+|.+|++||-....-+-|...... .-+---....--..++-.|-.....+ .-.
T Consensus 22 iq~iY~nSPVpVCVRNq~RkilYaN~aF~elF~Ked~~~sg~S~~~~-~vE~~LS~LELeCqsLGhG~af~r~F---n~~ 97 (127)
T 4ew7_A 22 IQDIYKNSPVPVCVRNQSRKIIYANGAFIELFSKEDQPLSGDSYNRY-GVEVFLSSLELECQSLGHGAAFCRRF---NFH 97 (127)
T ss_dssp HHHHHTTCSSCEEEECTTSCEEEECHHHHHHTTSCCCGGGCTTSSHH-HHHHHHHHHHHHHHHHCTTCEEEEEE---EET
T ss_pred HHhhhcCCCccEEEecccceEEEecchHHHHhhcccCcccCccccee-eehhhHHHHHHHHHhhcCCceEEEEe---ecC
Confidence 46678899999999999999999999999997543333333322110 00000000011123344444444333 346
Q ss_pred CCEEEEEEEEEEEECCC
Q 003978 212 EERVLVVATNTPFYDDD 228 (782)
Q Consensus 212 G~~~~v~~~~~Pi~d~~ 228 (782)
|+.+.+.+-...+.+++
T Consensus 98 ~e~yQIRmE~iSf~~~e 114 (127)
T 4ew7_A 98 GEIYQIRMENISFDNNE 114 (127)
T ss_dssp TEEEEEEEEEEECTTCC
T ss_pred CceEEEEEEEeeecCCc
Confidence 77788877776665443
No 360
>3lif_A Putative diguanylate cyclase (ggdef) with PAS/PAC; PDC fold, signaling protein; HET: CIT; 2.70A {Rhodopseudomonas palustris}
Probab=77.85 E-value=23 Score=34.89 Aligned_cols=95 Identities=13% Similarity=0.105 Sum_probs=58.4
Q ss_pred HHHHHHHHHcCc--eeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHH--cCCeEEEEE
Q 003978 130 RQYLNILQSMGQ--SVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIK--MGERWTGQF 205 (782)
Q Consensus 130 ~~~~~ile~~~d--~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~--~g~~~~~e~ 205 (782)
+.++.++...+. .|+++|.+|. ++.... .. ..+.+ ......+..++. .++.+..+.
T Consensus 58 ~~L~~~~~~~~~~~~i~i~d~~G~-~~~s~~------~~---~~~~~----------~~~r~~f~~a~~~~~~~~~is~p 117 (254)
T 3lif_A 58 ERLRALADNLPQLSDVAILDADGQ-LTYASV------KP---VPALD----------NSDRSYFRYHRANDDHTLLITGP 117 (254)
T ss_dssp HHHHHHHHHCTTEEEEEEECTTSB-EEEESS------SS---EECCB----------CTTSHHHHHHHHCCCCCCEEEEE
T ss_pred HHHHHHHhcCCccceEEEECCCCC-EecCCC------CC---CCCCC----------cccHHHHHHHHhCCCCCeEECCc
Confidence 556777776664 6899999999 543221 00 01111 111123455665 456555555
Q ss_pred EEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHH
Q 003978 206 PAKTKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQE 246 (782)
Q Consensus 206 ~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~ 246 (782)
..-...|. |+.....||++.+|+++|++++..++....+
T Consensus 118 ~~~~~~g~--~~i~~~~pi~~~~g~~~Gvl~~~i~l~~l~~ 156 (254)
T 3lif_A 118 IQSRTSGV--WVFVVSRRLETTDGKFFGVVVATIESEYFST 156 (254)
T ss_dssp EECTTTCC--EEEEEEEEEECTTCCEEEEEEEEECHHHHHH
T ss_pred eecCCCCc--EEEEEEeeeeCCCCCEeEEEEEEECHHHHHH
Confidence 44444554 5566778999989999999999998865543
No 361
>4e04_A Bacteriophytochrome (light-regulated signal trans histidine kinase), PHYB1; bacteriophytochrome chromophore binding domain; HET: LBV; 1.79A {Rhodopseudomonas palustris}
Probab=77.35 E-value=5.3 Score=42.26 Aligned_cols=54 Identities=9% Similarity=0.090 Sum_probs=42.5
Q ss_pred eeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCC
Q 003978 142 SVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGE 199 (782)
Q Consensus 142 ~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~ 199 (782)
.++++|.+++|+.+...+..++|.+.++++|+++.+++.+.. ...+...+....
T Consensus 31 ~Ll~~~~~~~I~~~S~N~~~~lg~~~~~~lG~~l~~ll~~~~----~~~l~~~l~~~~ 84 (327)
T 4e04_A 31 LLLALAADMTIVAGSDNLPELTGLAIGALIGRSAADVFDSET----HNRLTIALAEPG 84 (327)
T ss_dssp EEEEECTTCBEEEEETTHHHHHSCCHHHHTTCBHHHHBCHHH----HHHHHHHHHSCS
T ss_pred EEEEEcCCCeEEEEcccHHHHhCCChHhhcCCCHHHHcCHHH----HHHHHHHhhccc
Confidence 456788889999999999999999999999999999987543 233455555443
No 362
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=76.92 E-value=12 Score=34.11 Aligned_cols=90 Identities=14% Similarity=0.207 Sum_probs=53.2
Q ss_pred HHHHHHHHHcC-ceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEE
Q 003978 130 RQYLNILQSMG-QSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAK 208 (782)
Q Consensus 130 ~~~~~ile~~~-d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~ 208 (782)
..++.+-+... +-|+++|.+|.+++... .+.+|+++.. +. +..++ .|+.+... ..
T Consensus 45 ~~~~~~~~~~~~~~i~v~d~~G~~~~~~~----------~~~iG~~~~~---~~--------~~~al-~G~~~~~~--~~ 100 (142)
T 3by8_A 45 AIAEAVRKRNDLLFIVVTDMQSLRYSHPE----------AQRIGQPFKG---DD--------ILKAL-NGEENVAI--NR 100 (142)
T ss_dssp HHHHHHHHHTTCSEEEEEETTCBBSCCSS----------GGGTTSBCCC---GG--------GTGGG-GTCCEEEE--EC
T ss_pred HHHHHHHhhcCCcEEEEECCCCcEEECCC----------hHHCCCcCCC---CC--------HHHHh-CCCeEEEE--ec
Confidence 44555544443 57888999997665432 3467876541 11 12233 45544332 12
Q ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHH
Q 003978 209 TKTEERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQE 246 (782)
Q Consensus 209 ~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~ 246 (782)
...|.. + ....||++.+|+++|+|.+-.++.....
T Consensus 101 ~~~g~~--~-~~~~PV~~~~g~viGvv~vg~~~~~~~~ 135 (142)
T 3by8_A 101 GFLAQA--L-RVFTPIYDENHKQIGVVAIGLELSRVTQ 135 (142)
T ss_dssp SSSSCE--E-EEEEEEECTTSCEEEEEEEEEEHHHHHH
T ss_pred CccEEE--E-EEEEeEEcCCCCEEEEEEEeEEHHHHHH
Confidence 223322 2 3344999888999999999999876554
No 363
>2w1r_A Spovt, stage V sporulation protein T; regulatory GAF domain of spovt, transcription, transcription regulation, repressor, activator; 1.50A {Bacillus subtilis}
Probab=62.11 E-value=70 Score=28.30 Aligned_cols=88 Identities=18% Similarity=0.165 Sum_probs=55.8
Q ss_pred HHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEE----EE
Q 003978 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTG----QF 205 (782)
Q Consensus 130 ~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~----e~ 205 (782)
+..+.|.+.+..+|.|+|.+..|-++ |...++.+++++. ..+.+++++++.... ..
T Consensus 6 ~~AeiI~~~~~~aV~ItD~~~ilA~~--------G~g~~~~~~~~is------------~~~~~~i~~~k~~~~~~~~~~ 65 (123)
T 2w1r_A 6 EYADALYDSLGHSVLICDRDVYIAVS--------GSSKKDYLNKSIS------------EMLERTMDQRSSVLESDAKSV 65 (123)
T ss_dssp HHHHHHHHHHCSEEEEECSSBEEEEE--------SSCHHHHBTCBBC------------HHHHHHHHHCSCEEESSCEEE
T ss_pred HHHHHHHHHHCCeEEEEcCccEEEEE--------ecChhhcCCCccC------------HHHHHHHHcCCEEEEcCCccc
Confidence 55677888899999999999776654 5555566664331 125668888887433 11
Q ss_pred EEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEEE
Q 003978 206 PAKTKTEERVLVVATNTPFYDDDGTLVGIVCVST 239 (782)
Q Consensus 206 ~~~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~r 239 (782)
......+.. .-...+.||+ .+|+++|++.++.
T Consensus 66 ~~~~~~~~~-~~s~ii~PI~-~~g~viG~i~l~~ 97 (123)
T 2w1r_A 66 QLVNGIDED-MNSYTVGPIV-ANGDPIGAVVIFS 97 (123)
T ss_dssp ESBTTCEEE-ESEEEEEEEE-ETTEEEEEEEEEE
T ss_pred cccCCCCCC-eeEEEEEEEE-ECCEEEEEEEEEE
Confidence 111111122 2345678998 5779999998884
No 364
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=61.92 E-value=23 Score=28.38 Aligned_cols=33 Identities=27% Similarity=0.246 Sum_probs=26.8
Q ss_pred CCChHHHHHHHHHHHHhhHHHHHHHhhhccccC
Q 003978 4 NTGPAEELLRKIQELEAGQEHLKQELSKLKISN 36 (782)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (782)
--+-.++|-++|.||++...+|.+|=+-|+--.
T Consensus 13 VREEVevLKe~I~EL~e~~~qLE~EN~~Lk~~a 45 (78)
T 1dip_A 13 VREEVEILKEQIRELVEKNSQLERENTLLKTLA 45 (78)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 344567889999999999999999988887655
No 365
>3ra3_B P2F; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=61.38 E-value=3.1 Score=25.85 Aligned_cols=20 Identities=40% Similarity=0.609 Sum_probs=15.1
Q ss_pred HHHHHHhhHHHHHHHhhhcc
Q 003978 14 KIQELEAGQEHLKQELSKLK 33 (782)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~ 33 (782)
||++|...-++||||+..|.
T Consensus 1 kirrlkqknarlkqeiaale 20 (28)
T 3ra3_B 1 KIRRLKQKNARLKQEIAALE 20 (28)
T ss_dssp --CHHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHhhhHHHHHHHHHH
Confidence 68889999999999987653
No 366
>2ykf_A Pdtas, probable sensor histidine kinase pdtas; transferase, two-component system, GAF domain, PAS domain; 2.00A {Mycobacterium tuberculosis} PDB: 2ykh_A
Probab=65.48 E-value=1.7 Score=45.64 Aligned_cols=66 Identities=8% Similarity=-0.028 Sum_probs=46.0
Q ss_pred hhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEE----EcCCCCEEEEEEEEEEEECCCCCEEEEEEEEE-eh
Q 003978 167 AEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPA----KTKTEERVLVVATNTPFYDDDGTLVGIVCVST-DS 241 (782)
Q Consensus 167 ~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~----~~kdG~~~~v~~~~~Pi~d~~G~v~g~v~i~r-DI 241 (782)
.++++|+.+.....+ .+.+++++|......... ....| +..++.||++ +|+++|++.+.+ ||
T Consensus 69 ~~dvvG~~~~~~~~~--------~v~~~~~~g~~~~~~~~~~~~~~~~~~----v~~~~~Pi~~-~g~vigvl~~~~~di 135 (305)
T 2ykf_A 69 HTDAVGTVVAANSMP--------LVAATFSGGVPGREGAVGQQNSCQHDG----HSVEVSPVRF-GDQVVAVLTRHQPEL 135 (305)
Confidence 568899877655443 267778888764332211 01222 6889999997 689999999999 99
Q ss_pred hHHH
Q 003978 242 RPFQ 245 (782)
Q Consensus 242 Terk 245 (782)
++..
T Consensus 136 ~~~~ 139 (305)
T 2ykf_A 136 AARR 139 (305)
Confidence 9874
No 367
>3c8c_A Methyl-accepting chemotaxis protein; structural genomics, unknown function, uncharacterized protein; 1.50A {Vibrio cholerae o1 biovar eltor str}
Probab=54.15 E-value=55 Score=31.27 Aligned_cols=53 Identities=17% Similarity=0.226 Sum_probs=33.5
Q ss_pred HHHHHHcCCeEEEEEEEEcCCCCEEEEEEEEEEEECCC-CCEEEEEEEEEehhHHH
Q 003978 191 IVHRIKMGERWTGQFPAKTKTEERVLVVATNTPFYDDD-GTLVGIVCVSTDSRPFQ 245 (782)
Q Consensus 191 l~~~l~~g~~~~~e~~~~~kdG~~~~v~~~~~Pi~d~~-G~v~g~v~i~rDITerk 245 (782)
+..++..++.+-.+...-..+|. ++...+.||++.+ |+++|++++..++....
T Consensus 95 ~~~~~~~~~~~~s~~~~~~~~~~--~~i~~~~pi~~~~~g~~~Gvl~~~i~~~~l~ 148 (240)
T 3c8c_A 95 YKDAKNAGKLVITAPYADSASGE--ILVSVATPVKDSATGQFLGSIFYDVSLAELA 148 (240)
T ss_dssp HHHHHHHTSCEECCCEECTTTCC--EEEEEEEEEECTTTCCEEEEEEEEECHHHHH
T ss_pred HHHHHhcCCcEEeeceEcCCCCe--EEEEEEEEEEECCCCeEEEEEEEEEEHHHHH
Confidence 44555566554333332233454 5556677999865 99999998888876544
No 368
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=49.15 E-value=1.4e+02 Score=31.39 Aligned_cols=140 Identities=14% Similarity=0.094 Sum_probs=74.0
Q ss_pred eeEeeeeccCCcEEEEEEEEcCCeEEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCceeEEeee-------------e--
Q 003978 507 LTIGEQIGQGSCGTVYHAVWYGSDVAVKVFSRQEYSDEVIHSFRQEVSLMKRLRHPNVLLFMGA-------------V-- 571 (782)
Q Consensus 507 y~i~~~IG~G~~G~Vy~~~~~~~~vAiK~~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~-------------~-- 571 (782)
++.++..-.|..| ||.+...+..|+||-.. .-..+.+-.++...-.+.-|+.--+... +
T Consensus 71 v~~I~~s~~Gstg-vff~~td~~~~VVK~s~-----~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~ 144 (342)
T 1cja_A 71 FKGIERSEKGTEG-LFFVETESGVFIVKRST-----NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDK 144 (342)
T ss_dssp EEEEEECCSTTSC-EEEEEESSCEEEEECCT-----THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCS
T ss_pred eeEEEeccCCCCC-eEEEEeCCCEEEEeCcH-----HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhh
Confidence 7777877777655 55555567788899431 1233344445555555677764333211 0
Q ss_pred -------ecCCceeEEEeecCCCCHHHHHhh-cCCcchHHHHHHHHHHHHHHHHhhhcCCCCe--ee-cCCCCCcEEEcC
Q 003978 572 -------TSPQRLCIVTEFLPRGSLFRLLQR-NTTKLDWRRRILMALDIARGVSYLHHCNPPI--IH-RDLKSSNLLVDK 640 (782)
Q Consensus 572 -------~~~~~~~lv~E~~~ggsL~~~l~~-~~~~l~~~~~~~i~~qll~aL~~LH~~~~~i--vH-rDIKp~NILl~~ 640 (782)
...+.+.++|+|++|..|...-.. ....+..+....+. -+-++..+..+.-+. +. .--.+.|||++.
T Consensus 145 ~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~~~k~LG--~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~ 222 (342)
T 1cja_A 145 SFRVITTLANQANILLMELVRGITLNKLTTTSAPEVLTKSTMQQLG--SLMALDVIVNNSDRLPIAWTNEGNLDNIMLSE 222 (342)
T ss_dssp SSCHHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHHHHHHHH--HHHHHHHHHTCCSSSCSSSCSCCCGGGEEEES
T ss_pred hhHHHHHhhcccceehhhhcCCCccccchhhhhhhhcCHHHHHhhc--hhheehhhhcCCccCcccccCCCChhheEEeC
Confidence 012246699999987665432110 00112333332221 122445554433112 11 124789999976
Q ss_pred CC-cEEEEecCCCcc
Q 003978 641 HW-TVKVGDFGLSRL 654 (782)
Q Consensus 641 ~~-~vkL~DFGla~~ 654 (782)
++ .+.++|-+++..
T Consensus 223 ~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 223 RGATVVPIDSKIIPL 237 (342)
T ss_dssp BTTCEEECSCCCCCC
T ss_pred CCCeEEEEcCCcccc
Confidence 54 488899888754
No 369
>3s7o_A Bacteriophytochrome; biliverdin, PAS, GAF, photoreceptor, fluorescent protein; HET: LBV GOL; 1.24A {Deinococcus radiodurans} PDB: 3s7n_A* 3s7p_A* 3s7q_A* 2o9c_A* 2o9b_A* 1ztu_A*
Probab=49.13 E-value=10 Score=40.38 Aligned_cols=40 Identities=20% Similarity=0.211 Sum_probs=35.9
Q ss_pred eeEEEcC-CCcEEEecHHHHHHhCCChhhHcCCCccccccc
Q 003978 142 SVHIFDL-SDRIIYWNRSAELLYGYSAEEALGQDAIELLTD 181 (782)
Q Consensus 142 ~I~v~D~-dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~ 181 (782)
.++++|. +++|+.+...+..++|++.++++|+++.+++.+
T Consensus 54 ~LL~l~~~~~~I~~~S~N~~~~lg~~~~~llG~~l~~ll~~ 94 (343)
T 3s7o_A 54 ALLTADGHSGEVLQMSLNAATFLGQEPTVLRGQTLAALLPE 94 (343)
T ss_dssp EEEEEETTTCBEEEEETTHHHHHSSCHHHHTTCBHHHHSTT
T ss_pred EEEEEECCCCEEEEEcccHHHHhCcChHHHcCCCHHHHHhH
Confidence 4556886 799999999999999999999999999999876
No 370
>2gsv_A Hypothetical protein YVFG; alpha-helical protein, structural genomics, PSI, protein structure initiative; 1.90A {Bacillus subtilis} SCOP: a.23.7.1 PDB: 2js1_A
Probab=45.42 E-value=14 Score=29.03 Aligned_cols=26 Identities=31% Similarity=0.470 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhhhcc
Q 003978 8 AEELLRKIQELEAGQEHLKQELSKLK 33 (782)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (782)
-+.++++||-|++.-...|||-|||.
T Consensus 49 NAvvlkRiqHLdEAY~KVk~e~skle 74 (80)
T 2gsv_A 49 NAVVLKRIQHLDEAYNKVKRGESKLE 74 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-----
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 47899999999999999999999885
No 371
>3e4o_A C4-dicarboxylate transport sensor protein DCTB; PAS domain, N-TERM helical dimerization domain, transferase; 2.30A {Sinorhizobium meliloti} PDB: 3e4p_A 3e4q_A 2zbb_A
Probab=44.71 E-value=1.3e+02 Score=31.04 Aligned_cols=87 Identities=10% Similarity=0.067 Sum_probs=51.0
Q ss_pred CceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEcCCCCEEEEEE
Q 003978 140 GQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTEERVLVVA 219 (782)
Q Consensus 140 ~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~~v~~ 219 (782)
...|+++|.+|.++..+.. -.....+|.++. ....+.+++..+.... +..-...|. ++..
T Consensus 113 ~~~i~v~d~~G~viass~~------~~p~~~~g~d~~----------~R~yf~~Al~g~~~~~--~~~~~~tg~--~~i~ 172 (305)
T 3e4o_A 113 AAVIYLIDRSGVAVAASNW------QEPTSFVGNDYA----------FRDYFRLAVRDGMAEH--FAMGTVSKR--PGLY 172 (305)
T ss_dssp CSEEEEEETTSBEEEETTT------TSTTCCTTCBCT----------TSHHHHHHHHHSEEEE--EEECTTTCC--EEEE
T ss_pred ccEEEEECCCCCEEEeCCC------cCcccccCCCcc----------ccHHHHHHHhcCCcEE--EEEecCCCC--EEEE
Confidence 3578999999998875431 011122333321 1123455666544322 222233344 4456
Q ss_pred EEEEEECCCCCEEEEEEEEEehhHHHHH
Q 003978 220 TNTPFYDDDGTLVGIVCVSTDSRPFQET 247 (782)
Q Consensus 220 ~~~Pi~d~~G~v~g~v~i~rDITerk~~ 247 (782)
...||++ +|+++|++++..|+....+.
T Consensus 173 ~a~PV~~-~G~viGVv~v~i~l~~l~~~ 199 (305)
T 3e4o_A 173 ISRRVDG-PGGPLGVIVAKLEFDGVEAD 199 (305)
T ss_dssp EEEEEEE-TTEEEEEEEEEECCHHHHHH
T ss_pred EEEEEcc-CCeEEEEEEEEEcHHHHHHH
Confidence 6779986 59999999999999866543
No 372
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=41.21 E-value=28 Score=25.72 Aligned_cols=25 Identities=28% Similarity=0.575 Sum_probs=22.2
Q ss_pred ChHHHHHHHHHHHHhhHHHHHHHhh
Q 003978 6 GPAEELLRKIQELEAGQEHLKQELS 30 (782)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~ 30 (782)
.+-+.|++.++-|..+--||||||+
T Consensus 3 asYdQL~~QVe~Lk~ENshLrrEL~ 27 (54)
T 1deb_A 3 ASYDQLLKQVEALKMENSNLRQELE 27 (54)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhHHHHHHH
Confidence 3567899999999999999999986
No 373
>4fpp_A Phosphotransferase; four helix bundle, bergerat fold, CCKA, CTRA, CPDR, bacterial cytoplasme; 2.20A {Caulobacter crescentus} PDB: 4fmt_A
Probab=41.00 E-value=5.5 Score=40.01 Aligned_cols=64 Identities=13% Similarity=0.069 Sum_probs=15.7
Q ss_pred CEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHHHHHHHHHhhccccccccCCchhHHHHHhCCCchhHHHHHHH
Q 003978 213 ERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQETRAALWDTKNSDTDSNINRPRNTVTAKLGLDSQQPLQATIA 287 (782)
Q Consensus 213 ~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~~E~~L~~~~~~~~~~~i~~~~~gl~~~l~~d~~qpL~~~i~ 287 (782)
..+++....+-+. ..|.....+..++|+|.++..+..++... .+ .- |.+.++||++.||.++..
T Consensus 3 ~~~~~~~~s~gl~-P~g~~~~~~~~~~e~~~~~~~e~~~~~~~----la-----al-las~IaHELrtPL~~I~~ 66 (247)
T 4fpp_A 3 SSHHHHHHSSGLV-PRGSHNQMTETVTETTAPASPEADVQGPD----FA-----AM-LAARLCHDFISPASAIVS 66 (247)
T ss_dssp -----------------------------------------CH----HH-----HH-HHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccCCC-cCCcHHHHHHHHHHHHHHHHHHHHhhHHH----HH-----HH-HHhccCHHHhHHHHHHHH
Confidence 3344444444443 34555566778889998877665553221 10 11 667899999999987654
No 374
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=39.89 E-value=24 Score=23.63 Aligned_cols=23 Identities=17% Similarity=-0.032 Sum_probs=17.7
Q ss_pred ChHHHHHHHHHHHHhhHHHHHHH
Q 003978 6 GPAEELLRKIQELEAGQEHLKQE 28 (782)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~ 28 (782)
.-.|||+.++.+||.+-++|+.=
T Consensus 7 dKVEell~~~~~le~EV~Rl~~l 29 (33)
T 2wq1_A 7 DKIEENTSKIYHNTNEIARNTKL 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHH
Confidence 34678888888888888888753
No 375
>3zq5_A Phytochrome-like protein CPH1; arginine finger, tandem GAF domain, receptor, PAS domain, chromophore, sensory transduction; HET: CYC; 1.95A {Synechocystis SP} PDB: 2vea_A*
Probab=38.44 E-value=16 Score=41.06 Aligned_cols=42 Identities=19% Similarity=0.165 Sum_probs=36.6
Q ss_pred eeEEEcC-CCcEEEecHHHHHHhCCChhhHcCCCccccccccc
Q 003978 142 SVHIFDL-SDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGR 183 (782)
Q Consensus 142 ~I~v~D~-dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~ 183 (782)
.++++|. +++|+.+...+..++|.+.++++|+++.+++.+..
T Consensus 31 ~LLal~~~~~~I~~~S~N~~~~lg~~~~~llG~~l~~ll~~~~ 73 (520)
T 3zq5_A 31 LVVVLQEPDLTISQISANCTGILGRSPEDLLGRTLGEVFDSFQ 73 (520)
T ss_dssp EEEEEETTTTEEEEEETTHHHHHSCCHHHHTTSBHHHHCEESS
T ss_pred EEEEEECCCCEEEEEcccHHHHhCcChHHHcCCCHHHHcCHHH
Confidence 3456886 78999999999999999999999999999987643
No 376
>3nhq_A Bacteriophytochrome; photoreceptor, PAS, signaling, signaling protei; HET: BLA; 2.55A {Pseudomonas aeruginosa} PDB: 3c2w_A* 3nop_C* 3not_C* 3nou_C* 3g6o_A* 3ibr_A*
Probab=36.64 E-value=30 Score=38.80 Aligned_cols=72 Identities=10% Similarity=0.128 Sum_probs=47.6
Q ss_pred eeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccc-cccccccccHHHHHHHHHHcCCeEEEEEEEEcCCCCEEEEEEE
Q 003978 142 SVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIE-LLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTEERVLVVAT 220 (782)
Q Consensus 142 ~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~-l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~~v~~~ 220 (782)
.++++|.+++|+.+...+..++|.+. ++|+++.+ ++.+.. ...+...+........-..+ ..+|..|++.+.
T Consensus 28 ~Ll~l~~~~~I~~~S~N~~~~lg~~~--~lG~~l~~~ll~~~~----~~~l~~~l~~~~~~~~p~~~-~~~~~~f~~~~H 100 (505)
T 3nhq_A 28 ALVTLRADGMVLAASENIQALLGFVA--SPGSYLTQEQVGPEV----LRMLEEGLTGNGPWSNSVET-RIGEHLFDVIGH 100 (505)
T ss_dssp EEEEECTTSBEEEEETTHHHHHSSCC--CTTCBCCHHHHHHHH----HHHHHHHHSCSSCCCCEEEE-CSSSSCEEEEEE
T ss_pred EEEEEcCCCeEEEEcccHHHHhCccc--ccCCchhhhhCCHHH----HHHHHHHhhcccccCCcEEE-ecCCceEEEEEE
Confidence 45668889999999999999999988 99999998 876532 23344544443221111222 255666665554
No 377
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=36.60 E-value=1.6e+02 Score=34.34 Aligned_cols=25 Identities=28% Similarity=0.239 Sum_probs=23.0
Q ss_pred cCCCCCcEEEcCCCcEEEEecCCCc
Q 003978 629 RDLKSSNLLVDKHWTVKVGDFGLSR 653 (782)
Q Consensus 629 rDIKp~NILl~~~~~vkL~DFGla~ 653 (782)
+|=.++||||+.+|++.=+|||..-
T Consensus 551 GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 551 GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred CCCCCcceEEeCCCCEEEEeehhhh
Confidence 6899999999999999999999863
No 378
>3lid_A Putative sensory BOX/ggdef family protein; PDC fold, signaling protein; 1.76A {Vibrio parahaemolyticus} PDB: 3lie_A 2p7j_A*
Probab=34.23 E-value=19 Score=37.14 Aligned_cols=104 Identities=5% Similarity=-0.048 Sum_probs=56.0
Q ss_pred HHHHHHHHHcC--ceeEEEcCCCc-EEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHc--CCeEEEE
Q 003978 130 RQYLNILQSMG--QSVHIFDLSDR-IIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKM--GERWTGQ 204 (782)
Q Consensus 130 ~~~~~ile~~~--d~I~v~D~dG~-Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~--g~~~~~e 204 (782)
+.|..++++-+ ..|.++|.+|+ ++.+|......+-.+..++ .. ......+..+++. |+.+...
T Consensus 67 ~~~~~~~~~~~~~~~i~lid~~G~~i~~~~~~~~~~~~~p~~~l--------~n----~~~R~yf~~a~~~~~~~~~~s~ 134 (295)
T 3lid_A 67 NMWSSVARNQKLYKQIRFLDTSGTEKVRIKYDFKTSIAGPSLIL--------RD----KSAREYFKYAQSLDNEQISAWG 134 (295)
T ss_dssp HHHHHHHHHHCCEEEEEEEETTSBEEEEEEEETTTTEEEECSCC--------CB----CTTSHHHHHHHHSCTTCCEECC
T ss_pred HHHHHHHhcCccccEEEEECCCCCEEEEEEccCCceeEcCcccc--------cc----chhhHHHHHHhcCCCCcEEEeC
Confidence 44666666544 46889999997 4455643211110001111 11 1112234555543 4443333
Q ss_pred EEEEcCCC----CEEEEEEEEEEEECCCCCEEEEEEEEEehhHHHH
Q 003978 205 FPAKTKTE----ERVLVVATNTPFYDDDGTLVGIVCVSTDSRPFQE 246 (782)
Q Consensus 205 ~~~~~kdG----~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITerk~ 246 (782)
...-..+| ...|+...+.||+ .+|+++|++++-.|+....+
T Consensus 135 ~~~~~~~g~~~~~~~p~i~~a~pV~-~~g~~~GVlv~~i~l~~l~~ 179 (295)
T 3lid_A 135 IELERDKGELVYPLSPSLRILMPIS-VNDVRQGYLVLNVDIEYLSS 179 (295)
T ss_dssp CEECEETTEECSSCCEEEEEEEEEE-ETTEEEEEEEEEEEHHHHHH
T ss_pred ceecccCCcccCCCCCEEEEEEEEc-cCCeEEEEEEEEecHHHHHH
Confidence 22222223 2246777788997 68999999999999876543
No 379
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=31.11 E-value=38 Score=27.25 Aligned_cols=26 Identities=23% Similarity=0.335 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhhhcc
Q 003978 8 AEELLRKIQELEAGQEHLKQELSKLK 33 (782)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (782)
.++|-+.|+|.|+...+|+.||+|++
T Consensus 42 I~eLEk~L~ekd~eI~~LqseLDKfr 67 (72)
T 3nmd_A 42 IDELELELDQKDELIQMLQNELDKYR 67 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45666778888888888888888874
No 380
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=30.66 E-value=34 Score=25.19 Aligned_cols=25 Identities=36% Similarity=0.424 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHhhHHHHHHHhhhcc
Q 003978 9 EELLRKIQELEAGQEHLKQELSKLK 33 (782)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (782)
.-|+.||++||.-=..+.||+-+|.
T Consensus 14 ~~L~~kv~~Le~~c~~~eQEieRL~ 38 (48)
T 3vmx_A 14 IQLATKIQHLEFSCSEKEQEIERLN 38 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHH
Confidence 4578999999999999999987765
No 381
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=27.35 E-value=83 Score=19.41 Aligned_cols=21 Identities=24% Similarity=0.559 Sum_probs=12.1
Q ss_pred hHHHHHHHHHHHHhhHHHHHH
Q 003978 7 PAEELLRKIQELEAGQEHLKQ 27 (782)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~ 27 (782)
-|.||.+.++.|.+.+..|+.
T Consensus 2 nadelykeledlqerlrklrk 22 (27)
T 3twe_A 2 NADELYKELEDLQERLRKLRK 22 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHH
Confidence 467787765555554444443
No 382
>3pxp_A Helix-turn-helix domain protein; DNA-binding, basic helix-loop-helix motif, BHLH motif, lambd repressor-like DNA-binding fold; HET: MSE MYR; 2.30A {Chloroflexus aurantiacus}
Probab=25.96 E-value=47 Score=34.39 Aligned_cols=35 Identities=14% Similarity=0.205 Sum_probs=32.0
Q ss_pred HHHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhC
Q 003978 130 RQYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYG 164 (782)
Q Consensus 130 ~~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~G 164 (782)
..++.+|+.++.+.+|+|....|+.+|+++..||+
T Consensus 99 p~l~~lLd~l~~PA~V~d~~~dvla~N~~a~~L~~ 133 (292)
T 3pxp_A 99 QYLIDMIRNMNVPAFVTDQYVNIIAANMITIRFFN 133 (292)
T ss_dssp HHHHHHHHTCSSCEEEEETTCBEEEEEHHHHHHHT
T ss_pred HHHHHHHHhcCCCeEEECCCCCHhhcCHHHHHHhC
Confidence 34888999997799999999999999999999996
No 383
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=25.86 E-value=23 Score=24.20 Aligned_cols=23 Identities=26% Similarity=0.313 Sum_probs=16.6
Q ss_pred hHHHHHHHHHHHHhhHHHHHHHh
Q 003978 7 PAEELLRKIQELEAGQEHLKQEL 29 (782)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~ 29 (782)
-.+||+.+-.+||.+-++||..+
T Consensus 9 kVEeLl~~~~~Le~EV~RL~~ll 31 (36)
T 1kd8_A 9 EVEEIESEVWHLENEVARLEKEN 31 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHh
Confidence 45677777777777777777655
No 384
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=25.82 E-value=3.5e+02 Score=30.91 Aligned_cols=25 Identities=32% Similarity=0.260 Sum_probs=22.6
Q ss_pred cCCCCCcEEEcCCCcEEEEecCCCc
Q 003978 629 RDLKSSNLLVDKHWTVKVGDFGLSR 653 (782)
Q Consensus 629 rDIKp~NILl~~~~~vkL~DFGla~ 653 (782)
+|=.++||||+.+|++.=+|||..-
T Consensus 477 gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 477 GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred cCCCCcceeEcCCCCEeeeehHHhh
Confidence 5889999999999999999999873
No 385
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=24.73 E-value=31 Score=23.20 Aligned_cols=25 Identities=36% Similarity=0.359 Sum_probs=17.1
Q ss_pred CChHHHHHHHHHHHHhhHHHHHHHh
Q 003978 5 TGPAEELLRKIQELEAGQEHLKQEL 29 (782)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (782)
+.-.+||+.+-.+||.+-++||.=|
T Consensus 6 E~kVEeLl~~n~~Le~EV~RLk~Ll 30 (33)
T 3m48_A 6 EAKVEELLSKNWNLENEVARLKKLV 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 3446777777777777777776543
No 386
>3cwf_A Alkaline phosphatase synthesis sensor protein PHO; PAS domain, alkaline phosphatase synthesi protein PHOR, structural genomics, PSI-2; HET: EPE; 2.20A {Bacillus subtilis subsp}
Probab=23.86 E-value=2.8e+02 Score=23.62 Aligned_cols=78 Identities=13% Similarity=0.181 Sum_probs=43.4
Q ss_pred HHHHHHHHcCceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEcC
Q 003978 131 QYLNILQSMGQSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTK 210 (782)
Q Consensus 131 ~~~~ile~~~d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~k 210 (782)
.+..+-+....-|.++|.+|+|++-+ + .. ....+ . +.+++..+.- +....
T Consensus 39 ~l~~~~~~~~~rItiiD~~G~Vl~dS-------~--------~~-------~~~~~-~--v~~al~~~~g-----r~s~t 88 (122)
T 3cwf_A 39 IIKDAGGALDVSASVIDTDGKVLYGS-------N--------GR-------SADSQ-K--VQALVSGHEG-----ILSTT 88 (122)
T ss_dssp HHHHHHHHHTCEEEEEETTSCEEEET-------T--------SS-------CCCHH-H--HHHHHTTCCE-----ECCC-
T ss_pred HHHHHHhhcCcEEEEECCCCcEEEeC-------C--------Cc-------ccchH-H--HHHHHhcCCC-----eeecc
Confidence 45555455556799999999999965 1 00 00011 1 6666766553 21112
Q ss_pred CCCEEEEEEEEEEEECCCCCEEEEEEEEEehhH
Q 003978 211 TEERVLVVATNTPFYDDDGTLVGIVCVSTDSRP 243 (782)
Q Consensus 211 dG~~~~v~~~~~Pi~d~~G~v~g~v~i~rDITe 243 (782)
.| . ...+.||. .+|++.|++-+...+..
T Consensus 89 ~~-~---lyva~Pi~-~~~~~~Gvirv~~~~~~ 116 (122)
T 3cwf_A 89 DN-K---LYYGLSLR-SEGEKTGYVLLSASEKS 116 (122)
T ss_dssp CS-C---CEEEEEEE-ETTEEEEEEEEECC---
T ss_pred CC-c---EEEEEEEe-eCCeEEEEEEEEecccc
Confidence 23 2 34566886 45688898877766543
No 387
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=23.84 E-value=55 Score=24.64 Aligned_cols=25 Identities=36% Similarity=0.429 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHhhHHHHHHHhhhcc
Q 003978 9 EELLRKIQELEAGQEHLKQELSKLK 33 (782)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (782)
..|+.||++||..-.+-.||+.+|.
T Consensus 21 ~~L~~kv~~Le~~c~e~eQEieRL~ 45 (58)
T 3a2a_A 21 VQLAAKIQHLEFSCSEKEQEIERLN 45 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4688999999998888889988764
No 388
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=23.43 E-value=28 Score=23.57 Aligned_cols=24 Identities=29% Similarity=0.439 Sum_probs=17.5
Q ss_pred ChHHHHHHHHHHHHhhHHHHHHHh
Q 003978 6 GPAEELLRKIQELEAGQEHLKQEL 29 (782)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~ 29 (782)
.-.|||+.+-.+||.+.++||.=|
T Consensus 8 dKVEeLl~~n~~Le~EV~RLk~LL 31 (34)
T 1uo4_A 8 DKGEEILSKLYHIENELARIKKLL 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHH
Confidence 446778888888888888877544
No 389
>2jn6_A Protein CGL2762, transposase; GFT PSI-2, protein structure, structural genomics, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: a.4.1.19
Probab=23.39 E-value=29 Score=29.07 Aligned_cols=29 Identities=14% Similarity=0.048 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhhhccccC
Q 003978 8 AEELLRKIQELEAGQEHLKQELSKLKISN 36 (782)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (782)
.....++|.+|+++.++|++|+.-|+...
T Consensus 61 ~~~~~~ei~~L~~e~~~L~~e~~~Lkk~~ 89 (97)
T 2jn6_A 61 AVSEAEQIRQLKKENALQRARTRHPAESC 89 (97)
T ss_dssp HHHTHHHHHHHHHCGGGGGGTTSCCCGGG
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445667777777777777776666543
No 390
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=22.53 E-value=71 Score=21.86 Aligned_cols=23 Identities=30% Similarity=0.319 Sum_probs=14.7
Q ss_pred hHHHHHHHHHHHHhhHHHHHHHh
Q 003978 7 PAEELLRKIQELEAGQEHLKQEL 29 (782)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~ 29 (782)
-.|||+.+-.+||.+-++||.=+
T Consensus 9 KVEeLl~~~~~Le~eV~RLk~ll 31 (36)
T 1kd8_B 9 KVEELKSKLWHLKNKVARLKKKN 31 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHh
Confidence 34667777777777777666433
No 391
>4g3b_A Alpha4F3D; alpha helix, de novo designed, fluorinated protein, coiled-C NOVO protein; HET: 6FL; 1.19A {Synthetic} PDB: 4g4l_A* 3twg_A*
Probab=22.40 E-value=67 Score=19.64 Aligned_cols=19 Identities=42% Similarity=0.543 Sum_probs=14.7
Q ss_pred HHHHHHhhHHHHHHHhhhc
Q 003978 14 KIQELEAGQEHLKQELSKL 32 (782)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~ 32 (782)
...|||..|++|+..-.||
T Consensus 6 ~ykeled~qerlrk~rkkl 24 (26)
T 4g3b_A 6 XYKELEDXQERLRKXRKKL 24 (26)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 4568999999998766554
No 392
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=21.85 E-value=18 Score=24.22 Aligned_cols=23 Identities=17% Similarity=0.128 Sum_probs=16.4
Q ss_pred ChHHHHHHHHHHHHhhHHHHHHH
Q 003978 6 GPAEELLRKIQELEAGQEHLKQE 28 (782)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~ 28 (782)
.-.|||+.+-.+||.+.++||.=
T Consensus 7 dKvEeLl~~~~~Le~EV~RLk~l 29 (33)
T 3c3g_A 7 XKLXEIXSKXYHXENXLARIKXL 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHH
Confidence 34577777778888887777753
No 393
>3by9_A Sensor protein; histidine kinase sensor domain, phosphoprotein, transferase, two-component regulatory system; 1.70A {Vibrio cholerae}
Probab=21.56 E-value=3.4e+02 Score=26.01 Aligned_cols=84 Identities=11% Similarity=0.057 Sum_probs=47.1
Q ss_pred ceeEEEcCCCcEEEecHHHHHHhCCChhhHcCCCccccccccccccHHHHHHHHHHcCCeEEEEEEEEcCCCCEEEEEEE
Q 003978 141 QSVHIFDLSDRIIYWNRSAELLYGYSAEEALGQDAIELLTDGRDFDVAYDIVHRIKMGERWTGQFPAKTKTEERVLVVAT 220 (782)
Q Consensus 141 d~I~v~D~dG~Ii~vN~aae~l~Gys~eEliG~~~~~l~~~~~~~~~~~~l~~~l~~g~~~~~e~~~~~kdG~~~~v~~~ 220 (782)
..|+++|.+|.++..+... ......|.+.. ....+..++..+.... ...-...|. ++...
T Consensus 73 ~~i~i~d~~G~~~~~~~~~------~~~~~~~~~~~----------~r~~~~~a~~~~~~~~--~~~~~~~g~--~~i~~ 132 (260)
T 3by9_A 73 ADTYLIDRFGNTIASSNWN------LDRSFIGRNFA----------WRPYFYLSIAGQKSQY--FALGSTSGQ--RGYYY 132 (260)
T ss_dssp SEEEEEETTSBEEEETTTT------STTCCTTCBCT----------TSHHHHHHTTTSCEEE--EEECTTTCC--EEEEE
T ss_pred ceEEEECCCCCEEEecCCC------CCCCccCCccc----------cCHHHHHHHhCCCceE--EEEecCCCC--EEEEE
Confidence 4688999999988754310 00111222111 1123445555444332 122233444 45566
Q ss_pred EEEEECCCCCEEEEEEEEEehhHHH
Q 003978 221 NTPFYDDDGTLVGIVCVSTDSRPFQ 245 (782)
Q Consensus 221 ~~Pi~d~~G~v~g~v~i~rDITerk 245 (782)
..||+ .+|+++|++++-.++....
T Consensus 133 ~~pi~-~~g~~~Gvv~~~i~l~~l~ 156 (260)
T 3by9_A 133 AYPVI-YAAEILGVIVVKMDLSAIE 156 (260)
T ss_dssp EEEEE-ETTEEEEEEEEEECSHHHH
T ss_pred EEEEc-cCCeEEEEEEEEEeHHHHH
Confidence 77998 6899999999998887543
No 394
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=21.29 E-value=27 Score=23.61 Aligned_cols=22 Identities=23% Similarity=0.268 Sum_probs=16.3
Q ss_pred ChHHHHHHHHHHHHhhHHHHHH
Q 003978 6 GPAEELLRKIQELEAGQEHLKQ 27 (782)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~ 27 (782)
.-.|||+.+=.+||.+.++||.
T Consensus 8 dKvEeLl~~~~~L~~EV~RLk~ 29 (34)
T 2bni_A 8 DKLEEILSKGHHICNELARIKK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccHHHHHHHHHHHH
Confidence 4457788888888888887774
No 395
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=20.79 E-value=20 Score=24.17 Aligned_cols=23 Identities=13% Similarity=0.182 Sum_probs=16.1
Q ss_pred ChHHHHHHHHHHHHhhHHHHHHH
Q 003978 6 GPAEELLRKIQELEAGQEHLKQE 28 (782)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~ 28 (782)
.-.|+|+.+-.+||.+-++||.=
T Consensus 8 dKVEeLl~~~~~Le~EV~RLk~l 30 (34)
T 3c3f_A 8 XKLEXILSXLYHXENEXARIXKL 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhHHHHHHHHHHHH
Confidence 34577777777777777777643
No 396
>3he4_B Synzip5; heterodimeric coiled-coil, de novo protein; 2.46A {Artificial gene}
Probab=20.05 E-value=77 Score=21.91 Aligned_cols=20 Identities=45% Similarity=0.516 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHhhHHHHHH
Q 003978 8 AEELLRKIQELEAGQEHLKQ 27 (782)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~ 27 (782)
..||-.-|||||+.-++||.
T Consensus 5 vkelknyiqeleernaelkn 24 (46)
T 3he4_B 5 VKELKNYIQELEERNAELKN 24 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHh
Confidence 46788889999998888765
Done!