Query 003980
Match_columns 782
No_of_seqs 358 out of 1888
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 10:18:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003980.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003980hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3abz_A Beta-glucosidase I; gly 100.0 7E-149 2E-153 1333.5 55.2 641 48-773 3-839 (845)
2 3zyz_A Beta-D-glucoside glucoh 100.0 6E-148 2E-152 1308.0 59.2 643 46-771 11-713 (713)
3 2x41_A Beta-glucosidase; hydro 100.0 2E-146 5E-151 1303.5 54.7 638 49-772 2-715 (721)
4 1x38_A Beta-D-glucan exohydrol 100.0 8E-117 3E-121 1029.5 44.8 524 39-630 4-601 (602)
5 3rrx_A EXO-1,3/1,4-beta-glucan 100.0 6E-116 2E-120 1034.7 41.8 519 46-635 21-619 (822)
6 3bmx_A Uncharacterized lipopro 100.0 2E-104 5E-109 931.6 36.6 497 44-632 28-640 (642)
7 3sql_A Glycosyl hydrolase fami 100.0 8.4E-74 2.9E-78 648.3 28.3 419 77-571 82-523 (535)
8 3tev_A Glycosyl hyrolase, fami 100.0 4.9E-61 1.7E-65 521.3 17.7 256 76-369 70-338 (351)
9 4gvf_A Beta-hexosaminidase; TI 100.0 3E-52 1E-56 451.0 9.5 249 78-361 54-314 (349)
10 4g6c_A Beta-hexosaminidase 1; 100.0 8.9E-52 3E-56 447.7 11.2 250 75-361 60-322 (348)
11 2oxn_A Beta-hexosaminidase; TI 100.0 6.4E-52 2.2E-56 448.0 8.5 245 78-361 54-308 (340)
12 3idu_A Uncharacterized protein 96.7 0.0039 1.3E-07 57.3 8.0 66 668-758 32-98 (127)
13 2l0d_A Cell surface protein; s 95.6 0.028 9.7E-07 50.5 7.4 66 668-757 18-85 (114)
14 2kut_A Uncharacterized protein 95.5 0.01 3.5E-07 54.0 4.4 75 668-755 15-91 (122)
15 3isy_A Bsupi, intracellular pr 90.8 0.84 2.9E-05 41.2 8.4 72 668-754 17-99 (120)
16 1w8o_A Bacterial sialidase; 3D 87.9 1.2 4E-05 51.4 9.1 103 619-758 338-442 (601)
17 2iaa_C Azurin; quinoprotein, t 84.0 1.5 5.3E-05 40.0 5.9 15 715-729 85-99 (128)
18 1cuo_A Protein (azurin ISO-2); 83.3 1.9 6.4E-05 39.5 6.2 15 715-729 86-100 (129)
19 4ep8_B Urease subunit beta; al 83.2 1.5 5.3E-05 37.7 5.0 53 671-727 20-82 (101)
20 2x3c_A Toxic extracellular end 81.1 1.9 6.6E-05 46.1 6.2 65 669-735 36-116 (343)
21 4ubp_B Protein (urease (chain 78.2 3.1 0.00011 37.3 5.5 53 671-727 26-88 (126)
22 4ac7_B Urease subunit beta; hy 78.2 3.1 0.00011 37.3 5.5 53 671-727 26-88 (126)
23 1yew_A Particulate methane mon 77.7 4.8 0.00017 42.7 7.7 59 668-730 263-336 (382)
24 2e6j_A Hydin protein; PAPD, st 76.8 2.4 8E-05 37.2 4.5 62 669-738 26-87 (112)
25 3fsa_A Azurin; copper, cupredo 73.3 5.8 0.0002 36.0 6.1 70 672-755 28-113 (125)
26 3ay2_A Lipid modified azurin p 69.8 4.2 0.00014 38.8 4.6 15 715-729 125-139 (167)
27 2ccw_A Azurin II, AZN-2; elect 69.7 8 0.00027 35.2 6.3 15 715-729 86-100 (129)
28 1nwp_A Azurin; electron transp 69.3 8.3 0.00028 35.0 6.3 15 715-729 86-100 (128)
29 2ys4_A Hydrocephalus-inducing 68.4 4 0.00014 36.5 4.0 66 669-747 41-106 (122)
30 2aan_A Auracyanin A; cupredoxi 64.0 24 0.00082 32.0 8.5 27 713-755 98-124 (139)
31 3rfr_A PMOB; membrane, oxidore 58.8 17 0.00058 38.9 7.0 58 668-730 297-368 (419)
32 3qga_A UREA2, fusion of urease 57.6 11 0.00037 37.1 4.9 53 671-727 125-187 (225)
33 1xf1_A C5A peptidase, SCP; hyd 55.6 7.9 0.00027 47.1 4.5 61 669-730 499-564 (926)
34 1e9y_A Urease subunit alpha; h 55.1 10 0.00035 37.5 4.3 53 672-728 126-188 (238)
35 3kmh_A D-lyxose isomerase; cup 52.7 8.9 0.0003 38.4 3.5 49 676-730 130-186 (246)
36 3qbt_B Inositol polyphosphate 52.6 24 0.00084 32.3 6.4 56 670-730 44-100 (140)
37 2cal_A Rusticyanin; iron respi 49.8 51 0.0017 30.6 8.2 65 672-756 70-139 (154)
38 1qhq_A Protein (auracyanin); e 45.4 68 0.0023 28.8 8.2 27 714-756 98-124 (140)
39 4hci_A Cupredoxin 1; structura 40.9 38 0.0013 28.7 5.3 26 714-755 61-86 (100)
40 3hrz_B Cobra venom factor; ser 40.1 75 0.0026 32.0 8.3 60 668-730 95-154 (252)
41 4ay0_A Chaperone protein CAF1M 35.9 65 0.0022 31.8 6.8 49 672-730 29-84 (218)
42 4dzg_A PLIG; lysozyme inhibito 35.4 45 0.0016 29.4 5.0 43 715-757 35-95 (114)
43 1iby_A Nitrosocyanin; RED copp 33.5 41 0.0014 29.0 4.5 27 713-755 70-96 (112)
44 2co7_B SAFB chaperone, putativ 33.3 65 0.0022 31.9 6.4 48 672-729 29-81 (221)
45 4djm_A DRAB; chaperone, PILI; 32.4 73 0.0025 32.0 6.6 48 672-729 39-91 (239)
46 4fxk_B Complement C4-A alpha c 31.7 36 0.0012 40.3 4.9 58 668-730 167-224 (767)
47 3qis_A Inositol polyphosphate 29.8 77 0.0026 33.9 6.7 58 669-731 46-104 (366)
48 2hr0_B Complement C3 alpha' ch 28.6 85 0.0029 37.9 7.5 60 668-730 94-154 (915)
49 3o0l_A Uncharacterized protein 28.5 2.6E+02 0.0088 24.4 8.7 60 668-730 37-96 (112)
50 2qsv_A Uncharacterized protein 26.8 68 0.0023 31.5 5.2 54 669-734 19-72 (220)
51 2qsv_A Uncharacterized protein 26.3 73 0.0025 31.3 5.4 52 669-730 134-185 (220)
52 3vmn_A Dextranase; TIM barrel, 24.6 56 0.0019 37.5 4.5 59 668-734 21-82 (643)
53 2x0j_A Malate dehydrogenase; o 23.4 14 0.00049 38.4 -0.6 57 478-539 66-124 (294)
54 4gy7_A Urease; JACK bean, hydr 22.9 71 0.0024 38.3 5.2 53 671-727 151-213 (840)
55 1klf_A FIMC chaperone, chapero 21.9 1.1E+02 0.0037 29.8 5.5 48 672-728 17-69 (205)
56 3q48_A Chaperone CUPB2; IG fol 21.3 1.9E+02 0.0065 29.2 7.4 54 672-729 45-102 (257)
57 3gfu_C Chaperone protein FAEE; 20.9 1.6E+02 0.0055 29.2 6.6 49 672-729 17-71 (224)
58 2q3z_A Transglutaminase 2; tra 20.8 80 0.0027 36.7 4.9 60 669-730 487-548 (687)
59 1g0d_A Protein-glutamine gamma 20.6 1.2E+02 0.0042 35.1 6.3 60 669-730 486-546 (695)
60 3vku_A L-LDH, L-lactate dehydr 20.2 39 0.0013 35.7 2.0 57 478-539 73-131 (326)
61 3lcm_A SMU.1420, putative oxid 20.1 1.5E+02 0.005 28.3 6.0 55 470-535 62-131 (196)
No 1
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=100.00 E-value=6.9e-149 Score=1333.50 Aligned_cols=641 Identities=27% Similarity=0.438 Sum_probs=555.3
Q ss_pred HHHHHHHHhcCCHHHHHHHhhC----CCCCCCCCCCCcccccccccccccccCCceeccCCCCCcccCchhhHHHhcCCH
Q 003980 48 EDRAKNLVSLLTLKEKVQQLVN----TATGIPRLGVPSYEWWGEALHGVSNVGPAVRFNAMVPGATSFPAVILSAASFNA 123 (782)
Q Consensus 48 ~~r~~~ll~~MTleEKv~ql~~----~~~~~~rlgip~~~~~~~~~~g~~~~g~g~~~~~~~~~~t~fP~~~~laat~d~ 123 (782)
+.|+++||++||||||++||.+ ...+++|+|||.+ ++.|++||++ +.++.+ ..++|.||+++++|||||+
T Consensus 3 ~~r~~~ll~~mTleEKi~~l~g~~~~~~~~~~rlgiP~l-~~~D~~~G~~----~~~~~~-~~~~t~fP~~~~laat~d~ 76 (845)
T 3abz_A 3 KFDVEQLLSELNQDEKISLLSAVDFWHTKKIERLGIPAV-RVSDGPNGIR----GTKFFD-GVPSGCFPNGTGLASTFDR 76 (845)
T ss_dssp CCCHHHHHHHCCHHHHHHHTBCSSSSBCCCBGGGTBCCC-BEEECTTSCC----CSCSTT-CCCBCCCCCHHHHHHTCCH
T ss_pred HHHHHHHHHcCCHHHHHHHhcCCCccccccCcccCCCCE-EEEecCCCee----eeeccC-CCCcCcCcCHHHHHhcCCH
Confidence 3579999999999999999986 3567899999999 6899999975 122211 1248999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCcee-ecccccccCCCCCCcccCCCCCChHHHHHHHHHHHHHHhhccCCCCCCCCCc
Q 003980 124 SLWLKMGQVVSTEARAMYNVGQAGLTY-WSPNVNVFRDPRWGRGQETPGEDPLVVSKYAVNYVRGLQEIGDSKNSSSDRL 202 (782)
Q Consensus 124 ~l~~~~g~~~g~E~ra~~~~~~~Gi~~-~aP~~dv~r~p~~gR~~esfgeDP~l~~~~a~a~v~GlQ~~~~g~~~~~~~~ 202 (782)
+|++++|+++|+|+|++ |+|+ |||++||.|||+|||++|||||||+|+++|+.|+|+|||++ |
T Consensus 77 ~l~~~~g~~~g~E~ra~------Gi~~~laP~vdi~r~P~~gR~~EsfgeDP~lv~~~a~a~v~GlQ~~--g-------- 140 (845)
T 3abz_A 77 DLLETAGKLMAKESIAK------NAAVILGPTTNMQRGPLGGRGFESFSEDPYLAGMATSSVVKGMQGE--G-------- 140 (845)
T ss_dssp HHHHHHHHHHHHHHHHT------TCSEEECCBCCCCSSTTCTTGGGSCCSSHHHHHHHHHHHHHHHHHT--T--------
T ss_pred HHHHHHHHHHHHHHHHc------CCCEEecceECCCcCCCCCcccccCCCCHHHHHHHHHHHHHHHhhC--C--------
Confidence 99999999999999999 9998 99999999999999999999999999999999999999998 8
Q ss_pred eeeeeeccccccccCCCCCCcccccccccCHHHHHhhcCHHHHHHHHcCCcceEEeeccccCCccccCCHHHHHHHhhhh
Q 003980 203 KVSSCCKHYTAYDVDNWKGVDRFHFDAKVTKQDLEDTYQPPFKSCVQEGHVSSVMCSYNRVNGIPTCADPNLLKGVVRDQ 282 (782)
Q Consensus 203 ~v~a~~KHF~g~g~~~~~~~~r~~~~~~~~~~~l~e~~l~PF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~iLR~e 282 (782)
|++|+||||||+++ ++|...++.+++++|+|+||+||++||+++.+++||||||++||+|||+|++||++|||+|
T Consensus 141 -V~a~~KHFpg~g~e----~~r~~~~~~v~~~~L~e~~L~PF~~ai~~ag~~~VM~syn~ing~pa~~s~~ll~~lLR~e 215 (845)
T 3abz_A 141 -IAATVKHFVCNDLE----DQRFSSNSIVSERALREIYLEPFRLAVKHANPVCIMTAYNKVNGEHCSQSKKLLIDILRDE 215 (845)
T ss_dssp -CBCEEEEETTCCCC----TTTTTCEEECCHHHHHHTTSHHHHHHHHHHCCSEEEECSSEETTEEGGGCHHHHTCCCCCC
T ss_pred -eeEEeeccccCCcc----cCCccccCCCCHHHHHHhhHHHHHHHHHhcCCCEEEecCCCcCCEeccCCHHHHHHHHhhc
Confidence 99999999999865 3577778889999999999999999997444679999999999999999999999999999
Q ss_pred cCcCcEEEcCchhhhhhhccccccCChHHHHHHHHHcCCCccCCc---chh-HHHHHHHHCCC-CcHHHHHHHHHHHHHH
Q 003980 283 WGLDGYIVSDCDSIQVYDTAIRYTATPEDAVALALNAGLNMNCGD---YLG-KYTENAVNMSK-VKESVVDQALIYNYIV 357 (782)
Q Consensus 283 ~Gf~G~VvSD~~~~~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~---~~~-~~l~~av~~G~-i~~~~ld~av~RiL~~ 357 (782)
|||+|+|||||+++. ++++|++||+||+|+. ++. +.|.+||++|+ |++++||+||+|||++
T Consensus 216 ~GF~G~VvSD~~~~~--------------~~~~Al~AG~D~~m~~~~~~~~~~~l~~av~~G~~i~~~~id~av~RIL~~ 281 (845)
T 3abz_A 216 WKWDGMLMSDWFGTY--------------TTAAAIKNGLDIEFPGPTRWRTRALVSHSLNSREQITTEDVDDRVRQVLKM 281 (845)
T ss_dssp TCCCSEEECCTTCCC--------------CSHHHHHHTCCBBCSSSCSSCCHHHHHHHHHTTCSCCHHHHHHHHHHHHHH
T ss_pred cCCCeEEEcccccHH--------------HHHHHHHcCCCcccCCchhhhHHHHHHHHHHcCccchHHHHHHHHHHHHHH
Confidence 999999999998763 2478999999999962 223 38999999999 9999999999999999
Q ss_pred HHHhC----CCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhhceEeccCC-CCCCCCCCCCCcEEEEccCCCccccccc
Q 003980 358 LMRLG----FFDGDPKSQPLGNLGPSDVCTDDHKSLALDAARQGIVLLGNN-GALPLSSNATQNLAVIGPNANATNVMIS 432 (782)
Q Consensus 358 k~~~G----lf~~~p~~~~~~~~~~~~~~~~~h~~la~~~A~esiVLLKN~-~~LPL~~~~~~kIaviG~~a~~~~~~~G 432 (782)
|+++| +|+ +|. .......+++++|+++|+++|+||||||||+ ++|||++ .+||+||||+|+....++|
T Consensus 282 k~~~g~l~~~~~-~p~----~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~LPL~~--~~~iaviGp~A~~~~~~Gg 354 (845)
T 3abz_A 282 IKFVVDNLEKTG-IVE----NGPESTSNNTKETSDLLRKIAADSIVLLKNKNNILPLKK--EDNIIVIGPNAKAKTSSGG 354 (845)
T ss_dssp HHHHHHTHHHHC-CCT----TCCCCCTTCSHHHHHHHHHHHHHHCEEEEECTTCCSCCT--TSCEEEESTTTSCCCCSCB
T ss_pred HHHhCCcccccc-CCc----cCccccccCCHHHHHHHHHHHHhCcEEeccCCcccCCCC--CCEEEEEcCCcchhhccCC
Confidence 99999 998 442 2212234789999999999999999999999 8999986 4799999999998876665
Q ss_pred CCCc-CCCCcCCHHHHHhhccc-ceeecCCCCCC------------------------------------c---------
Q 003980 433 NYAG-IPCGYTSPLQGLQKYVS-AVTYAPGCSNV------------------------------------K--------- 465 (782)
Q Consensus 433 ~~~g-~~~~~~t~l~gl~~~~~-~v~y~~G~~~~------------------------------------~--------- 465 (782)
+++. .+.+.+||++||+++.. .|.|+.||... .
T Consensus 355 gs~~~~~~~~vtpl~gi~~~~~~~v~y~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~~~~ 434 (845)
T 3abz_A 355 GSASMNSYYVVSPYEGIVNKLGKEVDYTVGAYSHKSIGGLAESSLIDAAKPADAENSGLIAKFYSNPVEERSDDEEPFHV 434 (845)
T ss_dssp STTCCCBSCCCCHHHHHHHHHTSCCEEECCCCCCSSCCBSGGGEESSTTSCSCTTTBSEEEEEESSCTTTSCTTCCCSEE
T ss_pred CccCcccCCcCCHHHHHHHhhcCceeeccccccccccccccccccccccccccCCCCceEEEEeccCcccCcccccceee
Confidence 5554 57889999999998754 46677665310 0
Q ss_pred --------------------------------------------------------------------------------
Q 003980 466 -------------------------------------------------------------------------------- 465 (782)
Q Consensus 466 -------------------------------------------------------------------------------- 465 (782)
T Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~l~idg~~v~~~~~~~~~~~~~~~~~~~~ 514 (845)
T 3abz_A 435 TKVNRSNVHLFDFKHEKVDPKNPYFFVTLTGQYVPQEDGDYIFSLQVYGSGLFYLNDELIIDQKHNQERGSFCFGAGTKE 514 (845)
T ss_dssp EEECSSEEECTTCCCTTSBTTBCCCEEEEEEEECCSSSEEEEEEEEEESEEEEEETTEEEEEESSSCCBCSTTTTTSBCC
T ss_pred eeccccceeecccccccccccccceeEEEEEEEecCCCccEEEEEeecCceEEEECCEEEeeccccccccccccccCccc
Confidence
Q ss_pred ------------------c------------------------CC-CcchHHHHHHhhcCCeEEEEEccCCcccccCCCC
Q 003980 466 ------------------C------------------------KD-DSLIEPAAKAAAAADVVVVVVGLDQSIEAEGLDR 502 (782)
Q Consensus 466 ------------------~------------------------~~-~~~~~~a~~~a~~aD~vIv~vG~~~~~~~Eg~Dr 502 (782)
. .+ ...+++|+++|++||+||||+|.++..++||.||
T Consensus 515 ~~~~~~l~~g~~y~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Av~~A~~ADvvVv~vG~~~~~e~Eg~DR 594 (845)
T 3abz_A 515 RTKKLTLKKGQVYNVRVEYGSGPTSGLVGEFGAGGFQAGVIKAIDDDEEIRNAAELAAKHDKAVLIIGLNGEWETEGYDR 594 (845)
T ss_dssp EEEEEEECTTCCEEEEEEEECTTTSCCSSCCCCCEEEEEEEECCCHHHHHHHHHHHHHTSSEEEEEEECCTTTSBTTBCC
T ss_pred ceeEEEecCCceeeEEEEeccCCcccccccccccceeecccccccchhhHHHHHHHHhcCCEEEEEEecCCccccccCCc
Confidence 0 00 0235678899999999999999999999999999
Q ss_pred CCCCCChhHHHHHHHHHHhcCCcEEEEEecCCeeeeccccccCCccEEEEccCCCchhHHHHHHHHhcCCCCccccCccc
Q 003980 503 ENLTLPGYQEKLVMEVANATKGTVILVVMAAGPVDISFAKSNRKIGGILWVGYPGQAGGDAIAQIIFGDYNPAGRSPFTW 582 (782)
Q Consensus 503 ~~l~Lp~~q~~Li~~va~~~~~pvVvVl~~g~P~~l~~~~~~~~v~Ail~a~~~G~e~g~AiAdVL~G~~nPsGkLPvT~ 582 (782)
.+|.||+.|++||++|+++ ++|||||+++|+|++|+|++ +++|||++|||||++|+||||||||++|||||||+||
T Consensus 595 ~~l~LP~~Q~~LI~aV~a~-~~~tVVVl~sG~pv~m~w~~---~v~AIL~aw~pGqegG~AiAdVLfG~vNPSGkLP~T~ 670 (845)
T 3abz_A 595 ENMDLPKRTNELVRAVLKA-NPNTVIVNQSGTPVEFPWLE---DANALVQAWYGGNELGNAIADVLYGDVVPNGKLSLSW 670 (845)
T ss_dssp SSSCCCTTHHHHHHHHHHH-CSCEEEEEECSSCCCCTTGG---GCSEEEECCCCCTTHHHHHHHHHTTSSCCCCCCSSCB
T ss_pred ccccCCHHHHHHHHHHHHh-CCCEEEEEeCCCcccCcchh---ccCeEEEcCCCcHHHHHHHHHHhcCCcCCCCCCceee
Confidence 9999999999999999975 67899999999999999984 7999999999999999999999999999999999998
Q ss_pred CCCcccCCCCCcCCccccccCCCCCC---CccccCC---CCCccccCCCCCccCcccc--cccCCccceeecccCcccCC
Q 003980 583 YPQQYVDQLPMTDMNMRANATANLPG---RTYRFYS---GKTVYPFGHGLSYSSFSKF--IVSAPSTVLIKKNRNSIHSS 654 (782)
Q Consensus 583 ~p~~~~~~~p~~~~~~~~~~~~~~~~---~~Yr~~~---~~~~ypFG~GLSYTtF~ys--~~~~~~~~~~~~~~~~~~~~ 654 (782)
|++. +|+|.++..........|.+ .+||||+ .+|+||||||||||||+|| +++++
T Consensus 671 -p~~~-~d~P~~~~~~~~~g~~~y~eg~~vgYR~y~~~~~~plfPFG~GLSYTtF~ys~~~l~v~--------------- 733 (845)
T 3abz_A 671 -PFKL-QDNPAFLNFKTEFGRVIYGEDIFVGYRYYEKLQRKVAFPFGYGLSYTTFELDISDFKVT--------------- 733 (845)
T ss_dssp -CSSG-GGSTTTTSCSCBTTEEECTTTTCCTHHHHHHHTCCCSBCTTCCBCSSCEEEEEEEEEEC---------------
T ss_pred -eCch-hhCCccccCCCCCCceeccCCccCCCcchhcCCCceeecccCCCcceeEEEeccccccc---------------
Confidence 6775 56887543211011111221 3699997 5799999999999999999 98721
Q ss_pred cccccccccccCCCceEEEEEEEEeCC-CCCcceEEEEEEeCCCCCCCCCcchhhhcccccccCCCCEEEEEEEec-cCC
Q 003980 655 HAQAIDVTTVNCKDLHFHVVIGVKNNG-PMSGSHVVLIFWKPPSASTAGAPNVELVGFERVDVQKGKTKNVTVGFD-VCQ 732 (782)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~v~v~VtNtG-~~~G~eVvQlY~~~~~~~~~~~p~k~L~gF~kv~L~pGes~~V~~~l~-~~~ 732 (782)
++.++|+|+||||| +++|+||||||+++|.++ +.+|.|+||||+||+|+||||++|+|+|+ . +
T Consensus 734 -------------~~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~-~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~-~ 798 (845)
T 3abz_A 734 -------------DDKIAISVDVKNTGDKFAGSEVVQVYFSALNSK-VSRPVKELKGFEKVHLEPGEKKTVNIDLELK-D 798 (845)
T ss_dssp -------------SSEEEEEEEEEECCSSCCEEEEEEEEEEESSCS-SCCCSCEEEEEEEEEECTTCEEEEEEEEEHH-H
T ss_pred -------------CCeEEEEEEEEECCcCCCcceeeeeeEeCCCCC-cchhhheeccceeEEECCCCEEEEEEEeCCh-H
Confidence 24799999999999 999999999999999988 89999999999999999999999999999 8 7
Q ss_pred CceEEeCC-CCEEEeCeEEEEEEeCCCcccceeEEEEEEecC
Q 003980 733 GLNLVDTD-GQRKLVIGLHTLIVGSPSERQVRHHLNVRLARS 773 (782)
Q Consensus 733 ~ls~~d~~-~~~~~e~G~y~i~vG~ss~~~~~~~~~~~~~~~ 773 (782)
+|++||.. ++|++|+|+|+|+||.||+ |++++.+|+|.++
T Consensus 799 ~l~~~d~~~~~~~~e~G~y~v~vG~ss~-di~l~~~~~v~~~ 839 (845)
T 3abz_A 799 AISYFNEELGKWHVEAGEYLVSVGTSSD-DILSVKEFKVEKE 839 (845)
T ss_dssp HHCEEETTTTEEEECSEEEEEEEESSTT-CEEEEEEEEECCC
T ss_pred HeeEEecCCCeEEEcCCEEEEEEECCCC-CceeEEEEEECce
Confidence 99999996 7899999999999999995 8999999998643
No 2
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=100.00 E-value=6e-148 Score=1308.03 Aligned_cols=643 Identities=27% Similarity=0.417 Sum_probs=543.1
Q ss_pred CHHHHHHHHHhcCCHHHHHHHhhCC----------CCCCCCCCCCcccccccccccccccCCceeccCCCCCcccCchhh
Q 003980 46 TYEDRAKNLVSLLTLKEKVQQLVNT----------ATGIPRLGVPSYEWWGEALHGVSNVGPAVRFNAMVPGATSFPAVI 115 (782)
Q Consensus 46 ~~~~r~~~ll~~MTleEKv~ql~~~----------~~~~~rlgip~~~~~~~~~~g~~~~g~g~~~~~~~~~~t~fP~~~ 115 (782)
.+++|+++||++||||||++||.+. +++++|||||.+ +..|++||++.. .++|.||+++
T Consensus 11 ~a~~ra~~l~~~lTl~EK~~l~~g~~~~~~~~~~~~~~i~rlgiP~~-~~~Dg~~G~r~~----------~~~T~fP~~~ 79 (713)
T 3zyz_A 11 TAYDKAKAALAKLNLQDKVGIVSGVGWNGGPCVGNTSPASKISYPSL-CLQDGPLGVRYS----------TGSTAFTPGV 79 (713)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHBBCCTTCSSSSEEBCCBGGGTBCCC-EEECCTTSCTTC----------SSCCCCCCHH
T ss_pred hHHHHHHHHHHhCCHHHHHHHhcCCCcccCccccccCCcCCCCCceE-EEEecCceEECC----------CCCCcCcCHH
Confidence 3789999999999999999999753 578999999999 478999997532 2489999999
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHhhhccCCCCcee-eccccc-ccCCCCCCcccCCCCCChHHHHHHHHHHHHHHhhccC
Q 003980 116 LSAASFNASLWLKMGQVVSTEARAMYNVGQAGLTY-WSPNVN-VFRDPRWGRGQETPGEDPLVVSKYAVNYVRGLQEIGD 193 (782)
Q Consensus 116 ~laat~d~~l~~~~g~~~g~E~ra~~~~~~~Gi~~-~aP~~d-v~r~p~~gR~~esfgeDP~l~~~~a~a~v~GlQ~~~~ 193 (782)
++|||||++|++++|+++|+|+|++ |+|+ |+|++| |.|||+|||++|+|||||+|+++|+.|+|+|||+.
T Consensus 80 ~laat~d~~l~~~~g~~~g~E~ra~------Gi~~~laP~vd~v~r~P~~gR~~e~fgeDP~l~~~~a~a~v~Glq~~-- 151 (713)
T 3zyz_A 80 QAASTWDVNLIRERGQFIGEEVKAS------GIHVILGPVAGPLGKTPQGGRNWEGFGVDPYLTGIAMGQTINGIQSV-- 151 (713)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHT------TCSEECCCBCSSCCCSTTCTTGGGTTCSCHHHHHHHHHHHHHHHHHT--
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHhc------CCCEEECCeecccCCCCCCCcccccccCCHHHHHHHHHHHHHHHhhC--
Confidence 9999999999999999999999999 9998 999999 88999999999999999999999999999999998
Q ss_pred CCCCCCCCceeeeeeccccccccCCCCCCcccccccccCHHHHHhhcCHHHHHHHHcCCcceEEeeccccCCccccCCHH
Q 003980 194 SKNSSSDRLKVSSCCKHYTAYDVDNWKGVDRFHFDAKVTKQDLEDTYQPPFKSCVQEGHVSSVMCSYNRVNGIPTCADPN 273 (782)
Q Consensus 194 g~~~~~~~~~v~a~~KHF~g~g~~~~~~~~r~~~~~~~~~~~l~e~~l~PF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ 273 (782)
| |++|+|||||||++. .|...++.+++++|+|+||+||+++|++| +++||||||++||+|||.|++
T Consensus 152 g---------V~a~~KHF~g~g~e~----~r~~~~~~v~~~~l~e~~l~pF~~ai~ag-~~~VM~syn~vng~pa~~s~~ 217 (713)
T 3zyz_A 152 G---------VQATAKHYILNEQEL----NRETISSNPDDRTLHELYTWPFADAVQAN-VASVMCSYNKVNTTWACEDQY 217 (713)
T ss_dssp T---------CEEEEEEETTCCCST----TTTTCEECCCHHHHHHTTTHHHHHHHHTT-CSEEEECSSEETTEEGGGCHH
T ss_pred C---------eEEEEecCccCCccc----cCccccCcCCHHHHHHhhhHHHHHHHHcC-CCeEEeeccccCCccCcCCHH
Confidence 8 999999999999764 45556778999999999999999999987 579999999999999999999
Q ss_pred HHHHHhhhhcCcCcEEEcCchhhhhhhccccccCChHHHHHHHHHcCCCccCCc--------chhHHHHHHHHCCCCcHH
Q 003980 274 LLKGVVRDQWGLDGYIVSDCDSIQVYDTAIRYTATPEDAVALALNAGLNMNCGD--------YLGKYTENAVNMSKVKES 345 (782)
Q Consensus 274 ll~~iLR~e~Gf~G~VvSD~~~~~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~--------~~~~~l~~av~~G~i~~~ 345 (782)
||++|||+||||+|+|||||+++. ++++|++||+||+|+. ++.+.|.+||++|+|+++
T Consensus 218 ll~~iLR~e~GF~G~VvSD~~a~~--------------~~~~ai~AG~D~~m~~~~~~~~~~~~~~~l~~av~~G~i~~~ 283 (713)
T 3zyz_A 218 TLQTVLKDQLGFPGYVMTDWNAQH--------------TTVQSANSGLDMSMPGTDFNGNNRLWGPALTNAVNSNQVPTS 283 (713)
T ss_dssp HHCCCCCCCSCCCSEEEESTTCCC--------------CSHHHHHHTCCBBSSSSCTTSCCCCSTHHHHHHHHTTSSCHH
T ss_pred HHHHHHHHHcCCCEEEEecCccHH--------------HHHHHHHcCCCEeCCCCcccchhHHHHHHHHHHHHcCCCCHH
Confidence 999999999999999999998642 3578999999999963 244889999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhhceEeccCC-CCCCCCCCCCCcEEEEccCC
Q 003980 346 VVDQALIYNYIVLMRLGFFDGDPKSQPLGNLGPSDVCTDDHKSLALDAARQGIVLLGNN-GALPLSSNATQNLAVIGPNA 424 (782)
Q Consensus 346 ~ld~av~RiL~~k~~~Glf~~~p~~~~~~~~~~~~~~~~~h~~la~~~A~esiVLLKN~-~~LPL~~~~~~kIaviG~~a 424 (782)
+||+||+|||++|+++|+|+ +++ +.... ....+++|+++||++|+||||||||+ ++|||++. +||+||||++
T Consensus 284 ~id~av~RIL~~k~~lg~~~-~~~--~~~~~--~~~~~~~h~~la~~~a~~sivLLKN~~~~LPL~~~--~~IaViG~~A 356 (713)
T 3zyz_A 284 RVDDMVTRILAAWYLTGQDQ-AGY--PSFNI--SRNVQGNHKTNVRAIARDGIVLLKNDANILPLKKP--ASIAVVGSAA 356 (713)
T ss_dssp HHHHHHHHHHHHHHHTTTTS-TTC--CCCCT--TSCCCTTTHHHHHHHHHHTCEEEEEGGGCCSCCCC--SEEEEESGGG
T ss_pred HHHHHHHHHHHHHHHhCCcc-cCC--CCccc--ccccCHHHHHHHHHhhhcceEEEccCCCccccCCC--CEEEEECCCc
Confidence 99999999999999999997 332 12111 12247899999999999999999999 89999864 7999999998
Q ss_pred Cccc-----------------ccccCCCc--CCCCcCCHHHHHhhccc----ceeecCCCCCCccCCCcchHHHHHHhhc
Q 003980 425 NATN-----------------VMISNYAG--IPCGYTSPLQGLQKYVS----AVTYAPGCSNVKCKDDSLIEPAAKAAAA 481 (782)
Q Consensus 425 ~~~~-----------------~~~G~~~g--~~~~~~t~l~gl~~~~~----~v~y~~G~~~~~~~~~~~~~~a~~~a~~ 481 (782)
+... ...|++++ .+++.+|++++|+++.. .+.|. ....+++|+++|++
T Consensus 357 ~~~~~G~~~~~~~~~~~~~~~~~~g~gs~~~~~~~~~t~~~~i~~~~~~~g~~v~~~---------~~~~~~~a~~~A~~ 427 (713)
T 3zyz_A 357 IIGNHARNSPSCNDKGCDDGALGMGWGSGAVNYPYFVAPYDAINTRASSQGTQVTLS---------NTDNTSSGASAARG 427 (713)
T ss_dssp SCCTTTTTCTTSGGGCCCCSSCCCCBSTTCCCCSCCCCHHHHHHHHHHTTTCEEEEE---------CSCCHHHHHHHHTT
T ss_pred cccccccccccccccccccCceecccCCCCcCcCCCCCHHHHHHHHhccCCeEEEEe---------CCccHHHHHHHhhc
Confidence 7421 11233333 46788999999998653 23332 12357899999999
Q ss_pred CCeEEEEEccCCcccccCC--------CCCCCCCChhHHHHHHHHHHhcCCcEEEEEecCCeeee-ccccccCCccEEEE
Q 003980 482 ADVVVVVVGLDQSIEAEGL--------DRENLTLPGYQEKLVMEVANATKGTVILVVMAAGPVDI-SFAKSNRKIGGILW 552 (782)
Q Consensus 482 aD~vIv~vG~~~~~~~Eg~--------Dr~~l~Lp~~q~~Li~~va~~~~~pvVvVl~~g~P~~l-~~~~~~~~v~Ail~ 552 (782)
+|+||||+|.. ++||. ||.+|.||+.|.+||++|++. ++|||||+++|+|++| +|+ +.++++|||+
T Consensus 428 aDv~Iv~vg~~---~gEg~~~~~g~~gDR~~l~Lp~~Q~~Li~~v~~~-~~~~VVVl~sG~p~~~~~w~-~~~~v~Ail~ 502 (713)
T 3zyz_A 428 KDVAIVFITAD---SGEGYITVEGNAGDRNNLDPWHNGNALVQAVAGA-NSNVIVVVHSVGAIILEQIL-ALPQVKAVVW 502 (713)
T ss_dssp CSEEEEEEEEC---CBCTTCCBTTBCSSCSCSSCSTTHHHHHHHHHHH-CSCEEEEEEESSCCCCHHHH-TCTTEEEEEE
T ss_pred CCEEEEEeccc---CCCCccccccCCCCcccccCChhHHHHHHHHHHh-CCCeEEEEecCCcccchhhh-hccccCEEEE
Confidence 99999999864 46666 999999999999999999975 6789999999999999 665 4468999999
Q ss_pred ccCCCchhHHHHHHHHhcCCCCccccCcccCCCcccCCCCCcCCccccccCCCCCC---CccccCCC---CCccccCCCC
Q 003980 553 VGYPGQAGGDAIAQIIFGDYNPAGRSPFTWYPQQYVDQLPMTDMNMRANATANLPG---RTYRFYSG---KTVYPFGHGL 626 (782)
Q Consensus 553 a~~~G~e~g~AiAdVL~G~~nPsGkLPvT~~p~~~~~~~p~~~~~~~~~~~~~~~~---~~Yr~~~~---~~~ypFG~GL 626 (782)
+|||||++|+||||||||++|||||||+|| |++. +|+|..... .+ ...|.+ ++|||||. +|+|||||||
T Consensus 503 aw~pGqegG~AiAdvL~G~~nPSGkLP~T~-p~~~-~d~p~~~~~-~~--~~~y~eg~~vgYRy~d~~~~~plypFG~GL 577 (713)
T 3zyz_A 503 AGLPSQESGNALVDVLWGDVSPSGKLVYTI-AKSP-NDYNTRIVS-GG--SDSFSEGLFIDYKHFDDANITPRYEFGYGL 577 (713)
T ss_dssp CCCCGGGHHHHHHHHHTTSSCCCCCCSSCB-CSCG-GGSSCCCCC-SS--EECCTTTTCCHHHHHHHTTCCCSBCTTCCB
T ss_pred cCCCCchhhheehhhhcCCcCCCccCccee-cCCh-hhCCCcccc-CC--ccccCCCCccCceeccCCCCceeecCCCCC
Confidence 999999999999999999999999999998 5654 568843211 11 112332 47999985 7999999999
Q ss_pred CccCcccccccCCccceeecccCcccCCcccccccccccCCCceEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCCCcch
Q 003980 627 SYSSFSKFIVSAPSTVLIKKNRNSIHSSHAQAIDVTTVNCKDLHFHVVIGVKNNGPMSGSHVVLIFWKPPSASTAGAPNV 706 (782)
Q Consensus 627 SYTtF~ys~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlY~~~~~~~~~~~p~k 706 (782)
|||||+|++++++... . . .... ......+..+++++.++|+|+|||||+++|+||||||+++|.++ +.+|.|
T Consensus 578 SYTtF~ys~l~~~~~~-~--~--~~~~--~~~~~gg~~~~~~~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~-~~~P~k 649 (713)
T 3zyz_A 578 SYTKFNYSRLSVLSTA-K--S--GPAT--GAVVPGGPSDLFQNVATVTVDIANSGQVTGAEVAQLYITYPSSA-PRTPPK 649 (713)
T ss_dssp CSSCEEEEEEEEEECC-C--C--EECC--SCEETTEETTTTSEEEEEEEEEEECSSSCEEEEEEEEEECCTTS-SSCCSC
T ss_pred CcccEEEeeeEecccc-c--c--Cccc--ccccccccccccCCeEEEEEEEEeCCCCccceeeeeeeecCCCC-CCchhH
Confidence 9999999999854210 0 0 0000 00000001122346899999999999999999999999999998 899999
Q ss_pred hhhcccccccCCCCEEEEEEEeccCCCceEEeCC-CCEEEeCeEEEEEEeCCCcccceeEEEEEEe
Q 003980 707 ELVGFERVDVQKGKTKNVTVGFDVCQGLNLVDTD-GQRKLVIGLHTLIVGSPSERQVRHHLNVRLA 771 (782)
Q Consensus 707 ~L~gF~kv~L~pGes~~V~~~l~~~~~ls~~d~~-~~~~~e~G~y~i~vG~ss~~~~~~~~~~~~~ 771 (782)
|||||+||+|+||||++|+|+|++ ++|++||.. ++|++|+|+|+|+||+||+ |++++.+|+|.
T Consensus 650 ~L~gF~kv~L~pGes~~V~~~l~~-~~ls~~d~~~~~w~ve~G~y~v~vG~sS~-d~~l~~~~~v~ 713 (713)
T 3zyz_A 650 QLRGFAKLNLTPGQSGTATFNIRR-RDLSYWDTASQKWVVPSGSFGISVGASSR-DIRLTSTLSVA 713 (713)
T ss_dssp EEEEEEEEEECTTCEEEEEEEEEG-GGGCEEETTTTEEEECCEEEEEEEESSSS-CEEEEEEEEEC
T ss_pred HhhhcccceeCCCCeEEEEEEEcH-HHeeeeecCCCeEEEcCceEEEEEECCCC-CcceeEEEEEC
Confidence 999999999999999999999998 899999985 7899999999999999995 99999888873
No 3
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=100.00 E-value=1.6e-146 Score=1303.50 Aligned_cols=638 Identities=26% Similarity=0.445 Sum_probs=548.3
Q ss_pred HHHHHHHhcCCHHHHHHHhhC-------------------CCCCCCCCCCCcccccccccccccccCCceeccCCCCCcc
Q 003980 49 DRAKNLVSLLTLKEKVQQLVN-------------------TATGIPRLGVPSYEWWGEALHGVSNVGPAVRFNAMVPGAT 109 (782)
Q Consensus 49 ~r~~~ll~~MTleEKv~ql~~-------------------~~~~~~rlgip~~~~~~~~~~g~~~~g~g~~~~~~~~~~t 109 (782)
+|+++||++||||||++||.+ .+.+++|+|||.+ ++.|++||+... .+..++....++|
T Consensus 2 ~r~~~ll~~mTleEK~~~l~g~~~~~~~g~~~~~~~g~~g~~~~v~rlgiP~~-~~~D~~~G~~~~-~~~~~~~~~~~~t 79 (721)
T 2x41_A 2 EKVNEILSQLTLEEKVKLVVGVGLPGLFGNPHSRVAGAAGETHPVPRVGLPAF-VLADGPAGLRIN-PTRENDENTYYTT 79 (721)
T ss_dssp CHHHHHHHHCCHHHHHHHTBCCCSTTSTTCCCCSSTTCSEECCCBGGGTBCCC-EEECCTTSCCCC-SCCTTCCCCCCCC
T ss_pred hhHHHHHHcCCHHHHHHHhcCCCCCccccccccccccccccccCcccCCCCCE-EEEcCCCCcccc-ccccccccCCCcc
Confidence 589999999999999999986 3456899999999 689999998621 1111111223689
Q ss_pred cCchhhHHHhcCCHHHHHHHHHHHHHHHHhhhccCCCCcee-ecccccccCCCCCCcccCCCCCChHHHHHHHHHHHHHH
Q 003980 110 SFPAVILSAASFNASLWLKMGQVVSTEARAMYNVGQAGLTY-WSPNVNVFRDPRWGRGQETPGEDPLVVSKYAVNYVRGL 188 (782)
Q Consensus 110 ~fP~~~~laat~d~~l~~~~g~~~g~E~ra~~~~~~~Gi~~-~aP~~dv~r~p~~gR~~esfgeDP~l~~~~a~a~v~Gl 188 (782)
.||+++++|||||++|++++|+++|+|+|++ |+|+ |||++||.|||+|||++|||||||+|+++|+.|+|+||
T Consensus 80 ~fP~~~~laat~d~~l~~~~g~~~a~E~~a~------Gi~~~~aP~vdi~r~p~~gR~~e~fgeDP~l~~~~a~a~v~G~ 153 (721)
T 2x41_A 80 AFPVEIMLASTWNRELLEEVGKAMGEEVREY------GVDVLLAPAMNIHRNPLCGRNFEYYSEDPVLSGEMASSFVKGV 153 (721)
T ss_dssp CCCCHHHHHHTCCHHHHHHHHHHHHHHHHHT------TCSEECCCBCCCCCSTTCTTGGGSCCSSHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHhhcCCHHHHHHHHHHHHHHHHHh------CCCEEeeceECCCCCCCCCcccccCCCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999 9997 99999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCCCceeeeeeccccccccCCCCCCcccccccccCHHHHHhhcCHHHHHHHHcCCcceEEeeccccCCccc
Q 003980 189 QEIGDSKNSSSDRLKVSSCCKHYTAYDVDNWKGVDRFHFDAKVTKQDLEDTYQPPFKSCVQEGHVSSVMCSYNRVNGIPT 268 (782)
Q Consensus 189 Q~~~~g~~~~~~~~~v~a~~KHF~g~g~~~~~~~~r~~~~~~~~~~~l~e~~l~PF~~ai~~g~~~~vM~sy~~vng~pa 268 (782)
|++ | |++|+|||||||++ +.|...++.+++++|+|+||+||+++|+++.+++||||||++||+||
T Consensus 154 q~~--g---------V~a~~KHF~g~g~e----~~r~~~ds~~~~~~l~e~~l~pF~~ai~~a~~~~vM~sy~~i~g~pa 218 (721)
T 2x41_A 154 QSQ--G---------VGACIKHFVANNQE----TNRMVVDTIVSERALREIYLRGFEIAVKKSKPWSVMSAYNKLNGKYC 218 (721)
T ss_dssp HTT--T---------CBCEEEEETTCCCC----TTTTTCEEECCHHHHHHTHHHHHHHHHHHHCCSEEEECSSEETTEEG
T ss_pred hhC--C---------eEEEecccccCCCC----CCCCcccCCCCHHHHHhhhHHHHHHHHHhcCCCEEEecCCCCCCccc
Confidence 997 8 99999999999965 36777788899999999999999999995457899999999999999
Q ss_pred cCCHHHHHHHhhhhcCcCcEEEcCchhhhhhhccccccCChHHHHHHHHHcCCCccCCcc--h--h------HHHHHHHH
Q 003980 269 CADPNLLKGVVRDQWGLDGYIVSDCDSIQVYDTAIRYTATPEDAVALALNAGLNMNCGDY--L--G------KYTENAVN 338 (782)
Q Consensus 269 ~~s~~ll~~iLR~e~Gf~G~VvSD~~~~~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~~--~--~------~~l~~av~ 338 (782)
|+|++||++|||+||||+|+|||||+++. ++++|++||+||+|+.. + . +.|.+||+
T Consensus 219 ~~s~~ll~~lLR~e~GF~G~VvSD~~~~~--------------~~~~al~AG~D~~m~~~~~~~~~~~~~~~~~l~~av~ 284 (721)
T 2x41_A 219 SQNEWLLKKVLREEWGFEGFVMSDWYAGD--------------NPVEQLKAGNDLIMPGKAYQVNTERRDEIEEIMEALK 284 (721)
T ss_dssp GGCHHHHTCCCCCCTCCCSEEEECTTCSS--------------CHHHHHHHTCCBBCSCCGGGTCTTCCCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHhcCCCEEEEccCchHH--------------HHHHHHHcCCCcccCCCcccccchhHHHHHHHHHHHH
Confidence 99999999999999999999999998752 36889999999998632 2 2 88999999
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhhceEeccCCCCCCCCCCCCCcEE
Q 003980 339 MSKVKESVVDQALIYNYIVLMRLGFFDGDPKSQPLGNLGPSDVCTDDHKSLALDAARQGIVLLGNNGALPLSSNATQNLA 418 (782)
Q Consensus 339 ~G~i~~~~ld~av~RiL~~k~~~Glf~~~p~~~~~~~~~~~~~~~~~h~~la~~~A~esiVLLKN~~~LPL~~~~~~kIa 418 (782)
+|+|++++||+||+|||++|+++|+|+. |. + ...+++++|+++|+++|+||||||||+++|||++. +||+
T Consensus 285 ~G~i~~~~id~av~Ril~~k~~~gl~~~-~~---~----~~~~~~~~h~~la~~~A~esiVLLKN~~~LPL~~~--~kIa 354 (721)
T 2x41_A 285 EGKLSEEVLDECVRNILKVLVNAPSFKN-YR---Y----SNKPDLEKHAKVAYEAGAEGVVLLRNEEALPLSEN--SKIA 354 (721)
T ss_dssp HTSSCHHHHHHHHHHHHHHHTTSGGGGT-CC---C----CSCCCHHHHHHHHHHHHHHHCEEEEESSCCSCCTT--CCEE
T ss_pred cCCccHHHHHHHHHHHHHHHHHhCCCCC-CC---c----ccccCCHHHHHHHHHHHHhchhhhcCCCcCCCCCC--CEEE
Confidence 9999999999999999999999999993 31 1 23567899999999999999999999889999864 7999
Q ss_pred EEccCCCcccccccC-CCcCCCCcCCHHHHHhhc-cc-----ceeec-------------CC---CCCC--ccCCCcch-
Q 003980 419 VIGPNANATNVMISN-YAGIPCGYTSPLQGLQKY-VS-----AVTYA-------------PG---CSNV--KCKDDSLI- 472 (782)
Q Consensus 419 viG~~a~~~~~~~G~-~~g~~~~~~t~l~gl~~~-~~-----~v~y~-------------~G---~~~~--~~~~~~~~- 472 (782)
||||+++....++++ +...+.+.+|++++|+++ +. .+.|. .| +... ...+...+
T Consensus 355 viG~~A~~~~~~g~gs~~~~~~~~vt~~~gl~~~G~~~~~~~~v~y~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 434 (721)
T 2x41_A 355 LFGTGQIETIKGGTGSGDTHPRYAISILEGIKERGLNFDEELAKTYEDYIKKMRETEEYKPRRDSWGTIIKPKLPENFLS 434 (721)
T ss_dssp EESGGGTSCCCSCBSTTCCCCSCCCCHHHHHHHTTCCBCHHHHHHHHHHHHHHHHSTTTSCBC-----CBCCCCCSCCSC
T ss_pred EEecCCcCccccCCCCCCcCcCCCCCHHHHHHHhccCCCCceEEEEeecccccccccccCCCccceeccccCCCchhhhc
Confidence 999999887543322 234677889999999987 43 35666 55 3210 11234556
Q ss_pred -HHHHHHhhcCCeEEEEEccCCcccccCCCCC----CCCCChhHHHHHHHHH----HhcCCcEEEEEecCCeeee-cccc
Q 003980 473 -EPAAKAAAAADVVVVVVGLDQSIEAEGLDRE----NLTLPGYQEKLVMEVA----NATKGTVILVVMAAGPVDI-SFAK 542 (782)
Q Consensus 473 -~~a~~~a~~aD~vIv~vG~~~~~~~Eg~Dr~----~l~Lp~~q~~Li~~va----~~~~~pvVvVl~~g~P~~l-~~~~ 542 (782)
+++++.|+++|+|||++|.+ ++||.||. +|.||+.|.+||++|+ +. ++|||||+++|+|++| +|+
T Consensus 435 ~~~a~~~a~~aDvvIv~vg~~---~gEg~Dr~~~~~~l~Lp~~q~~LI~~v~~~~~~~-~~~vVVVl~~g~P~~l~~~~- 509 (721)
T 2x41_A 435 EKEIHKLAKKNDVAVIVISRI---SGEGYDRKPVKGDFYLSDDETDLIKTVSREFHEQ-GKKVIVLLNIGSPVEVVSWR- 509 (721)
T ss_dssp HHHHHHHHHHCSEEEEEEECC---CBTTCCCCSSBTTTBCCHHHHHHHHHHHHHHHHT-TCCEEEEEECSSCCCCTTTG-
T ss_pred HHHHHHHHhcCCEEEEEEecc---ccccccccCCCCCccCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCCceEccchh-
Confidence 88999999999999999986 68999999 9999999999999998 54 6789999999999999 665
Q ss_pred ccCCccEEEEccCCCchhHHHHHHHHhcCCCCccccCcccCCCcccCCCCCcCCcccccc---CCCCCC---CccccCCC
Q 003980 543 SNRKIGGILWVGYPGQAGGDAIAQIIFGDYNPAGRSPFTWYPQQYVDQLPMTDMNMRANA---TANLPG---RTYRFYSG 616 (782)
Q Consensus 543 ~~~~v~Ail~a~~~G~e~g~AiAdVL~G~~nPsGkLPvT~~p~~~~~~~p~~~~~~~~~~---~~~~~~---~~Yr~~~~ 616 (782)
++++|||++|+|||++|+|+||||||++|||||||+|| |++. +|+|..++...+.. ...|.+ .+|||||.
T Consensus 510 --~~v~AiL~a~~pG~egg~AlAdVL~G~vnPSGkLPvT~-p~~~-~~~p~~~~~~~~~~~~~~~~y~eg~~vgYry~d~ 585 (721)
T 2x41_A 510 --DLVDGILLVWQAGQETGRIVADVLTGRINPSGKLPTTF-PRDY-SDVPSWTFPGEPKDNPQKVVYEEDIYVGYRYYDT 585 (721)
T ss_dssp --GGCSEEEECCCCGGGHHHHHHHHHHTSSCCCCCCSSCE-ESSG-GGCSCTTTTCBSTTSCSEEECTTTTCCTHHHHHH
T ss_pred --hcCCEEEEcCCCchhHHHHHHHHHcCCCCCCCCCceee-cCcc-ccCccccCCCCCccccccccccCCcccccceeec
Confidence 47999999999999999999999999999999999998 6665 56887212111100 012322 37999974
Q ss_pred ---CCccccCCCCCccCcccccccCCccceeecccCcccCCcccccccccccCCCceEEEEEEEEeCCCCCcceEEEEEE
Q 003980 617 ---KTVYPFGHGLSYSSFSKFIVSAPSTVLIKKNRNSIHSSHAQAIDVTTVNCKDLHFHVVIGVKNNGPMSGSHVVLIFW 693 (782)
Q Consensus 617 ---~~~ypFG~GLSYTtF~ys~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlY~ 693 (782)
+|+||||||||||||+||+++++ . .++.++|+|+|||||+++|+||||||+
T Consensus 586 ~~~~plypFG~GLSYTtF~ys~~~~~------~--------------------~~~~~~v~v~VtNtG~~~G~eVvQlYv 639 (721)
T 2x41_A 586 FGVEPAYEFGYGLSYTTFEYSDLNVS------F--------------------DGETLRVQYRIENTGGRAGKEVSQVYI 639 (721)
T ss_dssp HTCCEEECTTCCBCSSCEEEEEEEEE------E--------------------CSSEEEEEEEEEECSSSCBCCEEEEEE
T ss_pred CCCceeeccCCCCCcceeEeeceEee------c--------------------CCCeEEEEEEEEECCCCCCcEEeeEEE
Confidence 79999999999999999998832 1 135799999999999999999999999
Q ss_pred eCCCCCCCCCcchhhhccccc-ccCCCCEEEEEEEeccCCCceEEeCCCCEEEeCeEEEEEEeCCCcccceeEEEEEEec
Q 003980 694 KPPSASTAGAPNVELVGFERV-DVQKGKTKNVTVGFDVCQGLNLVDTDGQRKLVIGLHTLIVGSPSERQVRHHLNVRLAR 772 (782)
Q Consensus 694 ~~~~~~~~~~p~k~L~gF~kv-~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~e~G~y~i~vG~ss~~~~~~~~~~~~~~ 772 (782)
++|.++ +.+|.|+||||+|| .|+||||++|+|+|++ ++|++|| .++|++|+|+|+|+||+||+ |++++.+|+|.+
T Consensus 640 ~~~~~~-~~~P~k~L~gF~kv~~L~pGes~~V~~~l~~-~~l~~~d-~~~~~~e~G~y~v~vG~ss~-d~~~~~~~~v~~ 715 (721)
T 2x41_A 640 KAPKGK-IDKPFQELKAFHKTRLLNPGESEEVVLEIPV-RDLASFN-GEEWVVEAGEYEVRVGASSR-NIKLKGTFSVGE 715 (721)
T ss_dssp ECCCSS-SCCCSCEEEEEEECCCBCTTCEEEEEEEEEG-GGGCEEC-SSCEEECCEEEEEEEEEETT-EEEEEEEEEECS
T ss_pred ccCCCC-CCCchHHhhcccccccCCCCCeEEEEEEECH-HHhcEEc-CCeEEEeCceEEEEEECCCC-CcceEEEEEECc
Confidence 999998 89999999999999 9999999999999998 8999999 99999999999999999995 899999999853
No 4
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A*
Probab=100.00 E-value=8.3e-117 Score=1029.51 Aligned_cols=524 Identities=27% Similarity=0.431 Sum_probs=449.7
Q ss_pred CCCCCCCCHHHHHHHHHhcCCHHHHHHHhhCCC------------------------C--------------------CC
Q 003980 39 PFCNSSLTYEDRAKNLVSLLTLKEKVQQLVNTA------------------------T--------------------GI 74 (782)
Q Consensus 39 ~~~d~~~~~~~r~~~ll~~MTleEKv~ql~~~~------------------------~--------------------~~ 74 (782)
||+|++++.++|+++||++||||||||||++.. + ..
T Consensus 4 ~~~d~~~~~~~rv~~ll~~MTleEKigQl~~~~~~~~~~~~i~~~~vG~vi~~~~~~~~~~~~~~~~~~l~~~lq~~a~~ 83 (602)
T 1x38_A 4 LYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEWQDMVDGFQKACMS 83 (602)
T ss_dssp GGGCTTSCHHHHHHHHHTTCCHHHHHHHTEEEEGGGCCHHHHHHTTCCEEEECTTCCSSTTCCHHHHHHHHHHHHHHHHT
T ss_pred cccCCCCCHHHHHHHHHHcCCHHHHHhhhcccccccccHHHHHhcCCceEEeCCcccccccCCHHHHHHHHHHHHHHhcc
Confidence 899999999999999999999999999997410 0 14
Q ss_pred CCCCCCcccccccccccccccCCceeccCCCCCcccCchhhHHHhcCCHHHHHHHHHHHHHHHHhhhccCCCCcee-ecc
Q 003980 75 PRLGVPSYEWWGEALHGVSNVGPAVRFNAMVPGATSFPAVILSAASFNASLWLKMGQVVSTEARAMYNVGQAGLTY-WSP 153 (782)
Q Consensus 75 ~rlgip~~~~~~~~~~g~~~~g~g~~~~~~~~~~t~fP~~~~laat~d~~l~~~~g~~~g~E~ra~~~~~~~Gi~~-~aP 153 (782)
+|+|||.+ ++.|++||+... .++|.||+++++|||||++|++++|+++|+|+|++ |+|+ |+|
T Consensus 84 ~rlgiP~l-~~~D~~~G~~~~----------~~~t~fP~~~~laat~d~~l~~~~g~~~a~E~ra~------Gi~~~~aP 146 (602)
T 1x38_A 84 TRLGIPMI-YGIDAVHGQNNV----------YGATIFPHNVGLGATRDPYLVKRIGEATALEVRAT------GIQYAFAP 146 (602)
T ss_dssp SSSCCCCE-EEECCSSSSTTS----------TTCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHT------TCCEECCC
T ss_pred ccCCCCcE-EEEcCCCceeCC----------CCCCCCCCHHHHHhccCHHHHHHHHHHHHHHHHHc------CCCEEeec
Confidence 78999998 789999997531 25899999999999999999999999999999999 9998 999
Q ss_pred cccccCCCCCCcccCCCCCChHHHHHHHHHHHHHHhhccCCCCCCC--------CCceeeeeeccccccccCCCCCCccc
Q 003980 154 NVNVFRDPRWGRGQETPGEDPLVVSKYAVNYVRGLQEIGDSKNSSS--------DRLKVSSCCKHYTAYDVDNWKGVDRF 225 (782)
Q Consensus 154 ~~dv~r~p~~gR~~esfgeDP~l~~~~a~a~v~GlQ~~~~g~~~~~--------~~~~v~a~~KHF~g~g~~~~~~~~r~ 225 (782)
++||.|||+|||++|||||||+|+++|+. ||+|||+... .+| ...+|++|+|||||||.+.. ++.
T Consensus 147 ~vdv~r~p~~GR~~esfgeDP~lv~~~a~-~v~GlQ~~~~---~~~~~~~~~~~~~~gV~a~~KHFpg~g~~~~---~~~ 219 (602)
T 1x38_A 147 CIAVCRDPRWGRCYESYSEDRRIVQSMTE-LIPGLQGDVP---KDFTSGMPFVAGKNKVAACAKHFVGDGGTVD---GIN 219 (602)
T ss_dssp BCCCCSCTTSTTGGGSSCSSHHHHHHGGG-HHHHHHCCCC---TTCCTTCCCCCSTTSCBCEEEEETTGGGCGG---GCT
T ss_pred eeccccCCCcCccccCcCCCHHHHHHHHH-HHHHhcCCCc---cccccccccccccCCeEEEeccccCCCcccc---Ccc
Confidence 99999999999999999999999999999 9999998310 000 01249999999999997532 244
Q ss_pred ccccccCHHHHHhhcCHHHHHHHHcCCcceEEeeccccCCccccCCHHHHHHHhhhhcCcCcEEEcCchhhhhhhccccc
Q 003980 226 HFDAKVTKQDLEDTYQPPFKSCVQEGHVSSVMCSYNRVNGIPTCADPNLLKGVVRDQWGLDGYIVSDCDSIQVYDTAIRY 305 (782)
Q Consensus 226 ~~~~~~~~~~l~e~~l~PF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~iLR~e~Gf~G~VvSD~~~~~~~~~~~~~ 305 (782)
..++.+++++|+|+||+||+++|++| +++||||||++||+|||+|+++|++|||+||||+|+|||||++|.++...|+
T Consensus 220 ~~~~~~~~~~l~e~~l~pF~~ai~ag-~~~vM~sy~~v~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~~~~~~~~- 297 (602)
T 1x38_A 220 ENNTIINREGLMNIHMPAYKNAMDKG-VSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAG- 297 (602)
T ss_dssp TCEECCCHHHHHHHTSHHHHHHHHTT-CCEEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGGGSSSTT-
T ss_pred cccCcCCHHHHHHHHHHHHHHHHHcC-CCEEEecccccCCccccCCHHHHHHHhhcccCCCeEEEccchHHHHHHhhcC-
Confidence 45678999999999999999999987 5799999999999999999999999999999999999999999998875444
Q ss_pred cCChHHHHHHHHHcCCCccCCcc----hhHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCC-CCC
Q 003980 306 TATPEDAVALALNAGLNMNCGDY----LGKYTENAVNMSKVKESVVDQALIYNYIVLMRLGFFDGDPKSQPLGNLG-PSD 380 (782)
Q Consensus 306 ~~~~~ea~~~al~AG~D~~~~~~----~~~~l~~av~~G~i~~~~ld~av~RiL~~k~~~Glf~~~p~~~~~~~~~-~~~ 380 (782)
.+.++++++|++||+||+|.+. +.+.|.+||++|+|+++|||+||+|||++|+++|+|+ +| |.... ...
T Consensus 298 -~~~~~a~~~al~AG~D~~m~~~~~~~~~~~l~~av~~G~i~~~~id~av~RiL~~k~~~glf~-~p----~~~~~~~~~ 371 (602)
T 1x38_A 298 -SDYSYSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFE-NP----YADPAMAEQ 371 (602)
T ss_dssp -TTHHHHHHHHHHHTCCBEECCSCHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTT-CC----SCCGGGGGG
T ss_pred -CCHHHHHHHHHHcCCCcccCCcchhhHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhCCCC-CC----CCCcchhhc
Confidence 4678999999999999998642 4578999999999999999999999999999999999 54 22211 135
Q ss_pred CCcHHHHHHHHHHHhhceEeccCCC------CCCCCCCCCCcEEEEccCCCcccccccCCC-------cCCCCcCCHHHH
Q 003980 381 VCTDDHKSLALDAARQGIVLLGNNG------ALPLSSNATQNLAVIGPNANATNVMISNYA-------GIPCGYTSPLQG 447 (782)
Q Consensus 381 ~~~~~h~~la~~~A~esiVLLKN~~------~LPL~~~~~~kIaviG~~a~~~~~~~G~~~-------g~~~~~~t~l~g 447 (782)
+++++|+++++++|+||||||||++ +|||++. .+||+||||+++....++|+|+ +.+...+|++++
T Consensus 372 ~~~~~~~~la~~~a~~sivLLKN~~~~~~~~~LPL~~~-~~~iaviG~~A~~~~~~~gg~~~~~~g~~~~~~~~~t~~~~ 450 (602)
T 1x38_A 372 LGKQEHRDLAREAARKSLVLLKNGKTSTDAPLLPLPKK-APKILVAGSHADNLGYQCGGWTIEWQGDTGRTTVGTTILEA 450 (602)
T ss_dssp TTCHHHHHHHHHHHHHHCEEEEECSSTTSCCCCSCCSC-CSEEEEESTTTTCHHHHHCSSSSSTTCCSSCCSSCBCHHHH
T ss_pred cCCHHHHHHHHHHHHhceEEeccCCCCCcccccccCCC-CCEEEEEcCCCccccccCCcceeeccCCCCCCCCcccHHHH
Confidence 7899999999999999999999985 9999865 5799999999987655566653 225567899999
Q ss_pred Hhhccc---ceeecCCCCCCccCCCcchHHHHHHhhcCCeEEEEEccCCcccccCCCCCCCCCChhHHHHHHHHHHhcCC
Q 003980 448 LQKYVS---AVTYAPGCSNVKCKDDSLIEPAAKAAAAADVVVVVVGLDQSIEAEGLDRENLTLPGYQEKLVMEVANATKG 524 (782)
Q Consensus 448 l~~~~~---~v~y~~G~~~~~~~~~~~~~~a~~~a~~aD~vIv~vG~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~va~~~~~ 524 (782)
|+++.. .+.|..++. .++. .++++|+|||++|.++..++|| ||.+|.||+.|.+||+++++ ++
T Consensus 451 l~~~~~~~~~v~~~~~~~----------~~~~-~a~~aD~viv~~g~~~~~e~~g-dr~~l~lp~~q~~li~~v~~--~~ 516 (602)
T 1x38_A 451 VKAAVDPSTVVVFAENPD----------AEFV-KSGGFSYAIVAVGEHPYTETKG-DNLNLTIPEPGLSTVQAVCG--GV 516 (602)
T ss_dssp HHHHSCTTCEEEEESSCC----------HHHH-HHTTCSCEEEEEECCCCCGGGG-CCSSCCCCSSSHHHHHHHHT--TS
T ss_pred HHHHhCCCeEEEEcCCCC----------HHHH-HHhhCCEEEEEeccCcccccCC-CcCCcCCChhHHHHHHHHHh--CC
Confidence 998653 567776541 1223 3899999999999988888898 99999999999999999986 67
Q ss_pred cEEEEEecCCeeeeccccccCCccEEEEccCCCchhHHHHHHHHhcCCCCccccCcccCCCcccCCCCCcCCccccccCC
Q 003980 525 TVILVVMAAGPVDISFAKSNRKIGGILWVGYPGQAGGDAIAQIIFGDYNPAGRSPFTWYPQQYVDQLPMTDMNMRANATA 604 (782)
Q Consensus 525 pvVvVl~~g~P~~l~~~~~~~~v~Ail~a~~~G~e~g~AiAdVL~G~~nPsGkLPvT~~p~~~~~~~p~~~~~~~~~~~~ 604 (782)
|||||+++|+|++|.++. ++++|||++|+||+++ +|+||||||++|||||||+|| |++. +|+|.+
T Consensus 517 ~~VvVl~~g~P~~l~~~~--~~~~Ail~a~~pG~~g-~AiadvL~G~~nPsGkLP~t~-p~~~-~~~p~~---------- 581 (602)
T 1x38_A 517 RCATVLISGRPVVVQPLL--AASDALVAAWLPGSEG-QGVTDALFGDFGFTGRLPRTW-FKSV-DQLPMN---------- 581 (602)
T ss_dssp CEEEEEECSSCCCCHHHH--HHCSEEEEEECCCSBT-HHHHHHHTTSSCCCCCCSSCB-CSCG-GGCSCC----------
T ss_pred CEEEEEeCCCceeccchh--hccCeEEeccCCchHH-HHHHHHHcCCCCCCccCcccc-cCcc-ccCCcc----------
Confidence 999999999999996543 5899999999999997 999999999999999999998 5554 668853
Q ss_pred CCCCCccccCCCCCccccCCCCCccC
Q 003980 605 NLPGRTYRFYSGKTVYPFGHGLSYSS 630 (782)
Q Consensus 605 ~~~~~~Yr~~~~~~~ypFG~GLSYTt 630 (782)
.+||||+ |+||||||||||+
T Consensus 582 ----~g~~~~~--plypFG~GLSYt~ 601 (602)
T 1x38_A 582 ----VGDAHYD--PLFRLGYGLTTNA 601 (602)
T ss_dssp ----TTCSSCC--CSBCTTCCBCCCC
T ss_pred ----CCCCCCC--ccCcCCCCcCCCC
Confidence 1488885 9999999999996
No 5
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A
Probab=100.00 E-value=6.4e-116 Score=1034.73 Aligned_cols=519 Identities=27% Similarity=0.426 Sum_probs=437.7
Q ss_pred CHHHHHHHHHhcCCHHHHHHHhhCCCC--------------------C-----------------------------CCC
Q 003980 46 TYEDRAKNLVSLLTLKEKVQQLVNTAT--------------------G-----------------------------IPR 76 (782)
Q Consensus 46 ~~~~r~~~ll~~MTleEKv~ql~~~~~--------------------~-----------------------------~~r 76 (782)
+.++||++||++||||||||||++... + ..|
T Consensus 21 ~~~~rV~~ll~~MTLeEKiGQL~~~~~~~~~~~~i~~~~vGgvi~~~~~~p~~~~~~s~~q~~~l~~~lq~~a~~~~~~r 100 (822)
T 3rrx_A 21 AVEAQIEKLLAKMTIEQKVAQMIQPEIGYLTVEQMRKYGFGSYLNGGNTAPYGNKRADQATWLKYADEMYLAAMDSTLDG 100 (822)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHEECBTTTCCHHHHHHHCCSEEEECSSSCGGGCSSCCHHHHHHHHHHHHHHHHCCTTTC
T ss_pred cHHHHHHHHHHcCCHHHHHhCccccccCCCCHHHHHhCCCceEEECCccCccccccCCHHHHHHHHHHHHHHHHhhhccc
Confidence 679999999999999999999975210 0 137
Q ss_pred CCCCcccccccccccccccCCceeccCCCCCcccCchhhHHHhcCCHHHHHHHHHHHHHHHHhhhccCCCCcee-ecccc
Q 003980 77 LGVPSYEWWGEALHGVSNVGPAVRFNAMVPGATSFPAVILSAASFNASLWLKMGQVVSTEARAMYNVGQAGLTY-WSPNV 155 (782)
Q Consensus 77 lgip~~~~~~~~~~g~~~~g~g~~~~~~~~~~t~fP~~~~laat~d~~l~~~~g~~~g~E~ra~~~~~~~Gi~~-~aP~~ 155 (782)
+|||.+ ++.|++||+... .++|.||+++++|||||++|++++|+++|+|+|++ |+|+ |+|++
T Consensus 101 lgIPll-~~~D~~~G~~~~----------~~aT~FP~~i~laAt~d~~L~~~~g~~ia~E~ra~------Gin~~~aPvv 163 (822)
T 3rrx_A 101 IAIPTV-WGTDAMHGHSNV----------YGATLFPHNIGLGAARDTDLIKRIGQATAKEVAAT------GIEWSFAPTV 163 (822)
T ss_dssp CCCCCE-EEEECTTSSTTS----------TTCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHTT------TCCEEEEEEC
T ss_pred CCCCeE-EEeccCCcEEcc----------CCCCCCcCHHHHhhcCCHHHHHHHHHHHHHHHHhc------CCcEeecccc
Confidence 899998 789999997531 25899999999999999999999999999999999 9998 99999
Q ss_pred cccCCCCCCcccCCCCCChHHHHHHHHHHHHHHhhccCCCCCCCCCceeeeeeccccccccCCCCCCcccccccccCHHH
Q 003980 156 NVFRDPRWGRGQETPGEDPLVVSKYAVNYVRGLQEIGDSKNSSSDRLKVSSCCKHYTAYDVDNWKGVDRFHFDAKVTKQD 235 (782)
Q Consensus 156 dv~r~p~~gR~~esfgeDP~l~~~~a~a~v~GlQ~~~~g~~~~~~~~~v~a~~KHF~g~g~~~~~~~~r~~~~~~~~~~~ 235 (782)
||.|||+|||++|+|||||+|+++|+.|||+|||+...+ ..+...+|++|+|||||||... .+|...++.+++++
T Consensus 164 Dv~rdPr~GR~~EsfGEDP~lv~~~a~A~V~GlQ~~~~~--~~~~~~gV~a~~KHFpG~G~~~---~~r~~~~~~vs~~~ 238 (822)
T 3rrx_A 164 AVVRDDRWGRTYESYSEDPDLVKRYAGEMVTGIQGDVGA--DFLKGSNRIATAKHFVGDGGTE---RGVDRGNTLIDEKG 238 (822)
T ss_dssp CCCSCTTSTTGGGSSCSCHHHHHHHHHHHHHHHHCCSST--TTTCTTCCEEEEEEESCGGGBG---GGCTTCEECCCHHH
T ss_pred ccccCCCcCccccCCCCCHHHHHHHHHHHHHHHhccccc--ccccCCCeEEEeeeccCCCccc---cCccCccCcCCHHH
Confidence 999999999999999999999999999999999985110 1112335999999999998532 24555667899999
Q ss_pred HHhhcCHHHHHHHHcCCcceEEeeccccCCccccCCHHHHHHHhhhhcCcCcEEEcCchhhhhhhccccccCChHHHHHH
Q 003980 236 LEDTYQPPFKSCVQEGHVSSVMCSYNRVNGIPTCADPNLLKGVVRDQWGLDGYIVSDCDSIQVYDTAIRYTATPEDAVAL 315 (782)
Q Consensus 236 l~e~~l~PF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~iLR~e~Gf~G~VvSD~~~~~~~~~~~~~~~~~~ea~~~ 315 (782)
|+|+||+||+++|++| +.+||||||++||+|+|.|++||++|||+||||+|+|||||++|+.+.+ +..+++++
T Consensus 239 L~e~~L~PF~~aI~ag-~~sVM~syn~vng~pa~~s~~lLtdlLR~e~GF~G~VvSD~~~~~~i~~------~~~ea~~~ 311 (822)
T 3rrx_A 239 LRDIHSAGYFSAINQG-VQSVMASFNSWNGKRVHGDKHLLTDVLKNQLGFDGFVVSDWNAHKFVEG------CDLEQCAQ 311 (822)
T ss_dssp HHHTTSHHHHHHHHTT-CSEEEECSSEETTEEGGGCHHHHTCCCCCCSCCCSEEECCTTGGGGSTT------CBTTBCHH
T ss_pred HHHHhhHHHHHHHHcC-CCEEEeccccCCCccccCCHHHHHHHHHHhcCCCeEEecccchhhhhcC------ChHHHHHH
Confidence 9999999999999988 5699999999999999999999999999999999999999999987643 23467889
Q ss_pred HHHcCCCccCCcc----hhHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHhCCCCCCCCC--CCCCCCCCCCCCcHHHHHH
Q 003980 316 ALNAGLNMNCGDY----LGKYTENAVNMSKVKESVVDQALIYNYIVLMRLGFFDGDPKS--QPLGNLGPSDVCTDDHKSL 389 (782)
Q Consensus 316 al~AG~D~~~~~~----~~~~l~~av~~G~i~~~~ld~av~RiL~~k~~~Glf~~~p~~--~~~~~~~~~~~~~~~h~~l 389 (782)
|++||+||+|.+. +.+.|.+||++|+|+++|||+||+|||++|+++|||+ +|+. .++.. ....+++++|+++
T Consensus 312 Al~AG~Dm~m~~~~~~~~~~~l~~aV~~G~i~e~rID~av~RIL~~K~~lGLfd-~p~~~~~~~~~-~~~~v~~~eh~~l 389 (822)
T 3rrx_A 312 AINAGVDVIMVPEHFEAFYHNTVKQVKAGVIAESRINDAVRRFLRAKIRWGVFT-KSKPSARPESQ-HPQWLGAAEHRTL 389 (822)
T ss_dssp HHHHTCCBEECTTTHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHTTTT-SCCGGGSGGGS-CGGGTTCHHHHHH
T ss_pred HHHcCCCEECCCccHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCCCC-CCCcccccccc-cccccCCHHHHHH
Confidence 9999999999753 4578999999999999999999999999999999999 4421 11111 1235789999999
Q ss_pred HHHHHhhceEeccCC-CCCCCCCCCCCcEEEEccCCCcccccccCCC----c------CCCCcCCHHHHHhhccc----c
Q 003980 390 ALDAARQGIVLLGNN-GALPLSSNATQNLAVIGPNANATNVMISNYA----G------IPCGYTSPLQGLQKYVS----A 454 (782)
Q Consensus 390 a~~~A~esiVLLKN~-~~LPL~~~~~~kIaviG~~a~~~~~~~G~~~----g------~~~~~~t~l~gl~~~~~----~ 454 (782)
||++|+||||||||+ ++|||++. +||+||||+|++...+.|+|+ | .+++.+|+++||+++.. .
T Consensus 390 Are~A~eSiVLLKN~~~~LPL~~~--~~IaViGp~A~~~~~~~Ggws~~~~G~gs~~~~~~~~~t~l~gi~~~~~~~~~~ 467 (822)
T 3rrx_A 390 AREAVRKSLVLLKNNESILPIKAS--SRILVAGKGANAINMQAGGWSVSWQGTDNTNSDFPNATSIFSGLQSQVTKAGGK 467 (822)
T ss_dssp HHHHHHHHCEEEEEGGGCCSBCTT--SEEEEESTTTTCHHHHHCSSSSSSSCTTCCGGGSTTCBCHHHHHHHHHHHTTCE
T ss_pred HHHHHHhceEEEecCCCccCCCCC--CeEEEEcCCccchhhccCCcceeccccCCCcCCCCCCCCHHHHHHHHHHhcCCe
Confidence 999999999999999 89999874 699999999998766667664 1 13567899999998753 3
Q ss_pred eeecCCCCCCccCCCcchHHHHHHhhcCCeEEEEEccCCcccccCCCCCCCCCC---hhHHHHHHHHHHhcCCcEEEEEe
Q 003980 455 VTYAPGCSNVKCKDDSLIEPAAKAAAAADVVVVVVGLDQSIEAEGLDRENLTLP---GYQEKLVMEVANATKGTVILVVM 531 (782)
Q Consensus 455 v~y~~G~~~~~~~~~~~~~~a~~~a~~aD~vIv~vG~~~~~~~Eg~Dr~~l~Lp---~~q~~Li~~va~~~~~pvVvVl~ 531 (782)
+.|.... +.++++|++|||+|++++.|++| ||.+|.|| +.|.+||++|++ .++|||||++
T Consensus 468 v~~~~~~---------------~~a~~aDv~Iv~~Ge~~~~e~~g-Dr~~L~lp~g~~~q~~Li~av~a-~g~pvVvVl~ 530 (822)
T 3rrx_A 468 ITLSESG---------------EYTSKPDVAIVVIGEEPYAEWFG-DIELLEFQHETKHALALLKQLKA-DNIPVVTVFL 530 (822)
T ss_dssp EEECTTC---------------CCSSCCSEEEEEEECCCCCGGGG-CCSCCBTTTTTCHHHHHHHHHHH-TTCCEEEEEE
T ss_pred EEEcccc---------------cccccCCeEEEEecCCcccccCC-CcccccCCCCChHHHHHHHHHHH-hCCCEEEEEe
Confidence 4443210 13678999999999988777777 99999999 689999999986 5789999999
Q ss_pred cCCeeeeccccccCCccEEEEccCCCchhHHHHHHHHhcCC------CCccccCcccCCCcccCCCCCcCCccccccCCC
Q 003980 532 AAGPVDISFAKSNRKIGGILWVGYPGQAGGDAIAQIIFGDY------NPAGRSPFTWYPQQYVDQLPMTDMNMRANATAN 605 (782)
Q Consensus 532 ~g~P~~l~~~~~~~~v~Ail~a~~~G~e~g~AiAdVL~G~~------nPsGkLPvT~~p~~~~~~~p~~~~~~~~~~~~~ 605 (782)
+|+|+.|.++. ++++|||++||||++++ ||||||||++ |||||||+|| |++. +|+|+.+.
T Consensus 531 sGrP~~l~~~~--~~~~Ail~aw~pG~eGg-AiAdVLfG~v~g~~~~nPSGkLP~T~-P~~~-~q~P~~~~--------- 596 (822)
T 3rrx_A 531 SGRPLWVNKEL--NASDAFVAAWLPGSEGE-GVADVLLTNKQGKTQFDFTGKLSFSW-PKYD-DQFTLNLN--------- 596 (822)
T ss_dssp CSSCCBCHHHH--HTCSEEEEEECCCSBTH-HHHHHHBBCTTSCBSCCCCCCCSSCB-CSST-TCTTCCTT---------
T ss_pred CCcceeccchh--hhCCeEEEcCCCCchhH-HHHHHHhcccccccccCCCCCCceec-cCCc-ccCCcccC---------
Confidence 99999997654 47999999999999987 9999999997 9999999997 6664 78996321
Q ss_pred CCCCccccCCCCCccccCCCCCccCccccc
Q 003980 606 LPGRTYRFYSGKTVYPFGHGLSYSSFSKFI 635 (782)
Q Consensus 606 ~~~~~Yr~~~~~~~ypFG~GLSYTtF~ys~ 635 (782)
+.+| +|+||||||||||||+|..
T Consensus 597 -----~~~~--~PlypFG~GLSYt~f~~~~ 619 (822)
T 3rrx_A 597 -----DADY--DPLFAYGYGLTYQDNINVP 619 (822)
T ss_dssp -----CSSC--CCSBCTTCCBCTTCCCCCC
T ss_pred -----CCCC--ccccCCCCCcCCCCCcccc
Confidence 1122 8999999999999999964
No 6
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A*
Probab=100.00 E-value=1.5e-104 Score=931.59 Aligned_cols=497 Identities=18% Similarity=0.255 Sum_probs=406.7
Q ss_pred CCCHHHHHHHHHhcCCHHHHHHHhhCCCC-------------C-------------------------------------
Q 003980 44 SLTYEDRAKNLVSLLTLKEKVQQLVNTAT-------------G------------------------------------- 73 (782)
Q Consensus 44 ~~~~~~r~~~ll~~MTleEKv~ql~~~~~-------------~------------------------------------- 73 (782)
+.+.++|+++||++||||||+|||++... +
T Consensus 28 ~~~~~~rv~~ll~~MTleEKiGQl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vGgvil~~~n~~~~~q~~~l~~ 107 (642)
T 3bmx_A 28 ASKRAIDANQIVNRMSLDEKLGQMLMPDFRNWQKEGESSPQALTKMNDEVASLVKKYQFGGIILFAENVKTTKQTVQLTD 107 (642)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHTEECBCSEECCTTCSSCEECCSCCHHHHHHHHHHCCSEEECCGGGCSSHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCHHHHHhCceeecccccccccccccCCCCCCcHHHHHHHHhCCCcEEEECCCCCCCHHHHHHHHH
Confidence 45679999999999999999999965210 0
Q ss_pred -C--CCCCCCcccccccccccccccCCceeccCCCCCcccCchhhHHHhcCCHHHHHHHHHHHHHHHHhhhccCCCCcee
Q 003980 74 -I--PRLGVPSYEWWGEALHGVSNVGPAVRFNAMVPGATSFPAVILSAASFNASLWLKMGQVVSTEARAMYNVGQAGLTY 150 (782)
Q Consensus 74 -~--~rlgip~~~~~~~~~~g~~~~g~g~~~~~~~~~~t~fP~~~~laat~d~~l~~~~g~~~g~E~ra~~~~~~~Gi~~ 150 (782)
+ .++|||.+ +..|.+||... ++. ..|.||+++++|||||++|++++|+++|+|+|++ |+|+
T Consensus 108 ~lq~~~~~iPll-i~~D~e~G~v~-----r~~----~~t~fP~~~~laat~d~~l~~~~g~~~a~E~ra~------Gi~~ 171 (642)
T 3bmx_A 108 DYQKASPKIPLM-LSIDQEGGIVT-----RLG----EGTNFPGNMALGAARSRINAYQTGSIIGKELSAL------GINT 171 (642)
T ss_dssp HHHHHCSSSCCE-EEECCCBTTBC-----CCS----SSCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH------TCCE
T ss_pred HHHHHhcCCCcE-EEEcCCCCcee-----cCC----CCCCCCCHHHHHhhCCHHHHHHHHHHHHHHHHHc------CCCE
Confidence 0 25788877 67788887532 221 2399999999999999999999999999999999 9998
Q ss_pred -ecccccccCCCCCCc-ccCCCCCChHHHHHHHHHHHHHHhhccCCCCCCCCCceeeeeeccccccccCC---CCCCccc
Q 003980 151 -WSPNVNVFRDPRWGR-GQETPGEDPLVVSKYAVNYVRGLQEIGDSKNSSSDRLKVSSCCKHYTAYDVDN---WKGVDRF 225 (782)
Q Consensus 151 -~aP~~dv~r~p~~gR-~~esfgeDP~l~~~~a~a~v~GlQ~~~~g~~~~~~~~~v~a~~KHF~g~g~~~---~~~~~r~ 225 (782)
|+|++||.|||+||| ++|+|||||+|+++|+.|||+|||+. | |++|+|||||||... |.+.+
T Consensus 172 ~~aPvvDv~r~p~~grig~rsfgeDP~lv~~~a~a~v~Glq~~--g---------V~a~~KHFpg~g~~~~dsh~~~~-- 238 (642)
T 3bmx_A 172 DFSPVVDINNNPDNPVIGVRSFSSNRELTSRLGLYTMKGLQRQ--D---------IASALKHFPGHGDTDVDSHYGLP-- 238 (642)
T ss_dssp ECCCBCCCCCCTTCSSSGGGSSCSSHHHHHHHHHHHHHHHHHT--T---------CEEEEEEETCCTTCSSCTTTSCC--
T ss_pred EECCccccCCCCCCCcccccccCCCHHHHHHHHHHHHHHHHhC--C---------ceEEeccccCCCCccCCCCCCCc--
Confidence 999999999999997 78999999999999999999999997 8 999999999998543 32222
Q ss_pred ccccccCHHHHHhhcCHHHHHHHHcCCcceEEee---ccccC-------------CccccCCHHHHHHHhhhhcCcCcEE
Q 003980 226 HFDAKVTKQDLEDTYQPPFKSCVQEGHVSSVMCS---YNRVN-------------GIPTCADPNLLKGVVRDQWGLDGYI 289 (782)
Q Consensus 226 ~~~~~~~~~~l~e~~l~PF~~ai~~g~~~~vM~s---y~~vn-------------g~pa~~s~~ll~~iLR~e~Gf~G~V 289 (782)
...+++++|+|+||+||+++|++| +++|||| ||.+| |+|||+|++||++|||+||||+|+|
T Consensus 239 --~~~~~~~~l~e~~l~PF~~ai~ag-~~~VM~ah~~y~~id~~~~~~~~~g~~~g~pa~~s~~ll~~lLR~e~GF~G~V 315 (642)
T 3bmx_A 239 --LVSHGQERLREVELYPFQKAIDAG-ADMVMTAHVQFPAFDDTTYKSKLDGSDILVPATLSKKVMTGLLRQEMGFNGVI 315 (642)
T ss_dssp --BCCCCHHHHHHTTHHHHHHHHHTT-CCEEEECCCBCTTTCCCEEECTTTSCEEECBGGGCHHHHCCCCCCCSCCCSEE
T ss_pred --eeccCHHHHhhhhHHHHHHHHHcC-CCEEEEccccccccCccccccccccccCcccccCCHHHHHHHhhCcCCCCEEE
Confidence 235799999999999999999988 4799999 66777 7899999999999999999999999
Q ss_pred EcCchhhhhhhccccccCChHHHHHHHHHcCCCccCCc-------------chhHHHHHHHHCCCCcHHHHHHHHHHHHH
Q 003980 290 VSDCDSIQVYDTAIRYTATPEDAVALALNAGLNMNCGD-------------YLGKYTENAVNMSKVKESVVDQALIYNYI 356 (782)
Q Consensus 290 vSD~~~~~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~-------------~~~~~l~~av~~G~i~~~~ld~av~RiL~ 356 (782)
||||++|+++.+. .+..+++++|++||+||+|.+ .+.+.|.+||++|+|+++|||+||+|||+
T Consensus 316 vSD~~~m~ai~~~----~~~~~a~~~Al~AG~D~~l~~~~~~~~~~~~~~~~~~~~l~~av~~G~i~~~~id~av~RiL~ 391 (642)
T 3bmx_A 316 VTDALNMKAIADH----FGQEEAVVMAVKAGVDIALMPASVTSLKEEQKFARVIQALKEAVKNGDIPEQQINNSVERIIS 391 (642)
T ss_dssp ECSCTTSHHHHTT----SCHHHHHHHHHHHTCSBEESCSCCCSGGGTHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred EeCchhhHHHHhc----CCHHHHHHHHHHcCCCEecccccccccccchhHHHHHHHHHHHHHcCchhHHHHHHHHHHHHH
Confidence 9999999988752 367899999999999999543 24578999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCCCC------CCCCCcHHHHHHHHHHHhhceEeccCC-CCCCCCCCCCCcEEEEccCCCcccc
Q 003980 357 VLMRLGFFDGDPKSQPLGNLG------PSDVCTDDHKSLALDAARQGIVLLGNN-GALPLSSNATQNLAVIGPNANATNV 429 (782)
Q Consensus 357 ~k~~~Glf~~~p~~~~~~~~~------~~~~~~~~h~~la~~~A~esiVLLKN~-~~LPL~~~~~~kIaviG~~a~~~~~ 429 (782)
+|+++|+|+..| |.+.. ...+++++|+++++++|+||||||||+ ++|||++.+.+||+|+||++..
T Consensus 392 ~k~~~gl~~~~p----~~~~~~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~LPL~~~~~~~iaviG~~~~~--- 464 (642)
T 3bmx_A 392 LKIKRGMYPARN----SDSTKEKIAKAKKIVGSKQHLKAEKKLAEKAVTVLKNEQHTLPFKPKKGSRILIVAPYEEQ--- 464 (642)
T ss_dssp HHHHTTCSSCCC----CCCHHHHHHHHHHHTTCHHHHHHHHHHHHHHCEEEEEGGGCCSCCCCTTCEEEEEESSHHH---
T ss_pred HHHHcCCCcCCC----CcccccchhhhhhhcCCHHHHHHHHHHHHhCEEEEccCCCcCCCCCCCCCEEEEEeCCccc---
Confidence 999999999424 32210 124678999999999999999999999 8999985446799999997432
Q ss_pred cccCCCcCCCCcCCHHHHHhhccc--ceeecCCCCCCccCCCcchHHHHHHhhcCCeEEEEEccCCcccccCCCCCCCCC
Q 003980 430 MISNYAGIPCGYTSPLQGLQKYVS--AVTYAPGCSNVKCKDDSLIEPAAKAAAAADVVVVVVGLDQSIEAEGLDRENLTL 507 (782)
Q Consensus 430 ~~G~~~g~~~~~~t~l~gl~~~~~--~v~y~~G~~~~~~~~~~~~~~a~~~a~~aD~vIv~vG~~~~~~~Eg~Dr~~l~L 507 (782)
..+++++|+++.. .+.+..++.. .......++++++.++++|+|||+++.......| .+.+
T Consensus 465 -----------~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~a~~aDvvIv~~~~~~~~~~e-----~~~l 527 (642)
T 3bmx_A 465 -----------TASIEQTIHDLIKRKKIKPVSLSKM-NFASQVFKTEHEKQVKEADYIITGSYVVKNDPVV-----NDGV 527 (642)
T ss_dssp -----------HHHHHHHHHHHHHTTSSCCCEEEEE-ECTTCCCCHHHHHHHHHCSEEEEEECCSSCCCCE-----ETTE
T ss_pred -----------hhhHHHHHHHhhCCCCeeEEeccCC-CCcchhhHHHHHHHHhhCCEEEEEecCCCCCchh-----ccCC
Confidence 2468899988752 1222222211 1112245788999999999999966543111122 3457
Q ss_pred ChhH------------HHHHHHHHHhcCCcEEEEEecCCeeeeccccccCCccEEEEccCC--------CchhHHHHHHH
Q 003980 508 PGYQ------------EKLVMEVANATKGTVILVVMAAGPVDISFAKSNRKIGGILWVGYP--------GQAGGDAIAQI 567 (782)
Q Consensus 508 p~~q------------~~Li~~va~~~~~pvVvVl~~g~P~~l~~~~~~~~v~Ail~a~~~--------G~e~g~AiAdV 567 (782)
|+.| .+||+++++ +++|||||+ .|+|++++|+. +++|||++|++ |+++|+|+|||
T Consensus 528 ~~~q~~~~~~~~~~~~~~li~~~~~-~~~pvVvv~-~g~P~~l~~~~---~~~Ail~a~~~~G~~~g~~g~~~g~Aiadv 602 (642)
T 3bmx_A 528 IDDTISDSSKWATVFPRAVMKAALQ-HNKPFVLMS-LRNPYDAANFE---EAKALIAVYGFKGYANGRYLQPNIPAGVMA 602 (642)
T ss_dssp ECCCCCSSTTHHHHHHHHHHHHHHH-TTCCEEEEE-CSCGGGGGGCT---TCSEEEECSCCCCEETTEESCSHHHHHHHH
T ss_pred ccccccccccccchhHHHHHHHHHH-cCCCEEEEe-cCChhcccccc---ccCeEEEEccCcccccccccchHHHHHHHH
Confidence 7777 999999976 578988765 59999999984 69999999999 79999999999
Q ss_pred HhcCCCCccccCcccCCCcccCCCCCcCCccccccCCCCCCCccccCCCCCccccCCCCCccCcc
Q 003980 568 IFGDYNPAGRSPFTWYPQQYVDQLPMTDMNMRANATANLPGRTYRFYSGKTVYPFGHGLSYSSFS 632 (782)
Q Consensus 568 L~G~~nPsGkLPvT~~p~~~~~~~p~~~~~~~~~~~~~~~~~~Yr~~~~~~~ypFG~GLSYTtF~ 632 (782)
|||++|||||||+||| ++. ++ ++|+||||||||||+|.
T Consensus 603 LfG~~nPsGkLPvt~p-~~~------------------~~--------~~plfpfG~GLsYt~~~ 640 (642)
T 3bmx_A 603 IFGQAKPKGTLPVDIP-SVT------------------KP--------GNTLYPLGYGLNIKTGR 640 (642)
T ss_dssp HTTSSCCCCCCSSCEE-CSS------------------ST--------TSEEECTTCCBCTTTCS
T ss_pred HcCCCCCCccCceeee-ccC------------------CC--------CCcccCCCCCccCCCCC
Confidence 9999999999999984 321 11 37899999999999985
No 7
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A*
Probab=100.00 E-value=8.4e-74 Score=648.31 Aligned_cols=419 Identities=18% Similarity=0.195 Sum_probs=316.7
Q ss_pred CCCCcccccccccccccccCCceeccCCCCCcccCchhhHHHhcCCH------HHHHHHHHHHHHHHHhhhccCCCCcee
Q 003980 77 LGVPSYEWWGEALHGVSNVGPAVRFNAMVPGATSFPAVILSAASFNA------SLWLKMGQVVSTEARAMYNVGQAGLTY 150 (782)
Q Consensus 77 lgip~~~~~~~~~~g~~~~g~g~~~~~~~~~~t~fP~~~~laat~d~------~l~~~~g~~~g~E~ra~~~~~~~Gi~~ 150 (782)
.|||.+ +..|.+||... ++ .++|.||+++++|||||. +|++++|+++|+|+|++ |+|+
T Consensus 82 agiPll-i~~D~egG~v~-----rl----~~~T~fP~~~alaat~~~d~~~~~~La~~~G~~~a~Elra~------Gin~ 145 (535)
T 3sql_A 82 AEIPLL-IAADIEEGVGQ-----RF----RGATEFPPPMAFGEIWRTDPHQAIALAETMGATTAQEALSL------GINW 145 (535)
T ss_dssp CSSCCE-EEECCSSCHHH-----HS----TTSCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH------TCCE
T ss_pred cCCCeE-EEeccCCCcee-----ec----CCCCCCCCHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHh------CCCE
Confidence 477776 56777777521 22 257999999999999955 78999999999999999 9998
Q ss_pred -ecccccccCCCCCC-cccCCCCCChHHHHHHHHHHHHHHhhccCCCCCCCCCceeeeeeccccccccCCCCCCcccccc
Q 003980 151 -WSPNVNVFRDPRWG-RGQETPGEDPLVVSKYAVNYVRGLQEIGDSKNSSSDRLKVSSCCKHYTAYDVDNWKGVDRFHFD 228 (782)
Q Consensus 151 -~aP~~dv~r~p~~g-R~~esfgeDP~l~~~~a~a~v~GlQ~~~~g~~~~~~~~~v~a~~KHF~g~g~~~~~~~~r~~~~ 228 (782)
|+|++||.|||+|| |++|||||||+++++|+.|||+|||+. | |++|+|||||||.+..+.+- ....
T Consensus 146 ~fAPvvDv~r~P~~g~ig~rsfGEDP~lv~~~a~A~v~GlQ~~--g---------V~a~~KHFpG~G~~~~Dsh~-~~~~ 213 (535)
T 3sql_A 146 VLAPVLDVNNNPHNPVINIRAFGETPDQVSALGTAFIRGAQQY--A---------VLTTAKHFPGHGDTATDSHL-ALPT 213 (535)
T ss_dssp ECCCBCCCCCCTTCSSSGGGSSCSSHHHHHHHHHHHHHHHTTS--S---------CBCEEEEETCCCSCSCCTTT-SCCB
T ss_pred EecCeeccCCCCCCCCccccCCCCCHHHHHHHHHHHHHHHhhc--c---------cceeeeeecccCCcccCCcc-CCCc
Confidence 99999999999999 689999999999999999999999997 8 99999999999865322221 1112
Q ss_pred cccCHHHHHhhcCHHHHHHHHcCCcceEEeeccccCC----ccccCCHHHHHHHhhhhcCcCcEEEcCchhhhhhhcccc
Q 003980 229 AKVTKQDLEDTYQPPFKSCVQEGHVSSVMCSYNRVNG----IPTCADPNLLKGVVRDQWGLDGYIVSDCDSIQVYDTAIR 304 (782)
Q Consensus 229 ~~~~~~~l~e~~l~PF~~ai~~g~~~~vM~sy~~vng----~pa~~s~~ll~~iLR~e~Gf~G~VvSD~~~~~~~~~~~~ 304 (782)
...++++|+|+||+||+++|++| +++||||||.+|+ .|||+|+++|+++||+||||+|+|||||++|+++...
T Consensus 214 v~~s~~~L~e~~L~PF~~aI~ag-~~sVM~ah~~v~~lD~~~PAs~S~~lLtdlLR~e~GF~G~VvSD~l~m~ai~~~-- 290 (535)
T 3sql_A 214 ISHDDTRLNTVELPPFKAAIQGG-VDAVMNAHLMIPAWDQQYPATLSPAILTGQLRHKLGFKGLIVTDALVMGGITQF-- 290 (535)
T ss_dssp CCCCHHHHHHTTSHHHHHHHHTT-CSEEEECCCBBTTTBSSSCGGGCHHHHCCCCCCCSCCCSEEECSCTTSHHHHTT--
T ss_pred CCCCHHHHHHHHHHHHHHHHHcC-CCEEEecCccCCCcCCCcCcccCHHHHHHHHHHhcCCCceEEcChhHHHHHHhc--
Confidence 34689999999999999999988 5799999998874 8999999999999999999999999999999988752
Q ss_pred ccCChHHHHHHHHHcCCCccCCc----chhHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCC
Q 003980 305 YTATPEDAVALALNAGLNMNCGD----YLGKYTENAVNMSKVKESVVDQALIYNYIVLMRLGFFDGDPKSQPLGNLGPSD 380 (782)
Q Consensus 305 ~~~~~~ea~~~al~AG~D~~~~~----~~~~~l~~av~~G~i~~~~ld~av~RiL~~k~~~Glf~~~p~~~~~~~~~~~~ 380 (782)
.+.+|++++|++||+||+|.+ .+.+.|.+||++|+|+++|||+||+|||++|+++|+|+. +. ... ...
T Consensus 291 --~~~~eaa~~Al~AG~Dm~l~~~~~~~~~~~l~~AV~~G~i~e~rId~av~RIL~~K~~lGl~~~-~~----~~~-~~~ 362 (535)
T 3sql_A 291 --AAPDTVVVQAIAAGADILLMPPDVDGAIIAIETAIKTGQLSESRIYESVERIWQAKQKILTATP-ST----FPQ-GIS 362 (535)
T ss_dssp --SCHHHHHHHHHHHTCSBEESCSCHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTSCC-CC----TTT-TCC
T ss_pred --CCHHHHHHHHHHCCCCeecCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCCC-Cc----cch-hhc
Confidence 367899999999999998643 345789999999999999999999999999999999983 31 121 236
Q ss_pred CCcHHHHHHHHHHHhhceEeccCCCCCCCC----CCCCCcEEEEccCCCcccccccCCCcCCCCcCCHHHHHhhccccee
Q 003980 381 VCTDDHKSLALDAARQGIVLLGNNGALPLS----SNATQNLAVIGPNANATNVMISNYAGIPCGYTSPLQGLQKYVSAVT 456 (782)
Q Consensus 381 ~~~~~h~~la~~~A~esiVLLKN~~~LPL~----~~~~~kIaviG~~a~~~~~~~G~~~g~~~~~~t~l~gl~~~~~~v~ 456 (782)
+++++|+++|+++|+||||| +++|||+ +++.++|+|||++++.+. ++|.++..++| ++..-++.
T Consensus 363 ~~~~eh~~lA~e~A~eSiVL---~~~LPL~~~~~~~~~~~laVIG~~a~~~~-----~~g~~~~~~~P----~~~G~~~~ 430 (535)
T 3sql_A 363 GDRPETRKTVAMVLERATKH---QKSLVKISSFPDNFARNLIVVDSVLKSPF-----LRPNCPAIAIP----QRHGYAAE 430 (535)
T ss_dssp TTCHHHHHHHHHHHHHHCEE---CSSCCCCCCCSTTSEEEEEEESCGGGCTT-----CCTTCHHHHHH----HTTTEEEE
T ss_pred cCCHHHHHHHHHHHHhCeEE---CCcCCCCcccccCCCCEEEEECCCCCCcc-----cCCCCCcccCH----HHcCceEE
Confidence 78999999999999999999 4699998 334689999999997643 44444444445 33322344
Q ss_pred ecCCCCCCccCCCcchHHHHHHhhcCCeEEEEEccCCcccccCCCCCCCCCChhHHHHHHHHHHhcCCcEEEEEecCCee
Q 003980 457 YAPGCSNVKCKDDSLIEPAAKAAAAADVVVVVVGLDQSIEAEGLDRENLTLPGYQEKLVMEVANATKGTVILVVMAAGPV 536 (782)
Q Consensus 457 y~~G~~~~~~~~~~~~~~a~~~a~~aD~vIv~vG~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~va~~~~~pvVvVl~~g~P~ 536 (782)
+...+. +.... .....-.+=+|+-.++...+.| |+ .+.++++.+. +.---+|+ -|+||
T Consensus 431 ~~~~~~---------~~~~~-~~~~~~~~q~f~r~~~f~~~~~--------~~--~~~~~~l~~~-~~~~~~~~-yg~py 488 (535)
T 3sql_A 431 IVELKT---------LPRLQ-LEAIPTLIQCFLRGNPFTEKLA--------DP--IDVLQKIAAQ-IPLQGVIF-YGSPY 488 (535)
T ss_dssp EEETTT---------GGGBC-CCSSCEEEEEEECCCSSCSSCC--------CC--HHHHHHHHHH-SCEEEEEE-EECCT
T ss_pred EEcCcc---------ccccc-cCCCCeEEEEeecCCCCCCCcc--------hH--HHHHHHHHhc-CceeEEEE-eCChh
Confidence 433221 00000 0111222335664444332211 33 5677777664 33233444 48899
Q ss_pred eecccc-ccCCccEEEEccCCCc--hhHHHHHHHHhcC
Q 003980 537 DISFAK-SNRKIGGILWVGYPGQ--AGGDAIAQIIFGD 571 (782)
Q Consensus 537 ~l~~~~-~~~~v~Ail~a~~~G~--e~g~AiAdVL~G~ 571 (782)
.+.|+. ..+ .|-|+|.+|| +++.-+...||+.
T Consensus 489 ~~~~~~~~~~---~~p~~~~~gq~~~~q~~~~~~~~~~ 523 (535)
T 3sql_A 489 FLEALQTTLP---EIPWWFSYGQMAIAQAEICTSLWEE 523 (535)
T ss_dssp THHHHHHHCT---TSCEEEESCCSHHHHHHHHHHTCSS
T ss_pred HHHHHHHHhh---cCCcccCCccCHHHHHHHHHHHhcc
Confidence 998875 333 4456678885 5555566667763
No 8
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans}
Probab=100.00 E-value=4.9e-61 Score=521.33 Aligned_cols=256 Identities=18% Similarity=0.234 Sum_probs=213.9
Q ss_pred CCCCCcccccccccccccccCCceeccCCCCCcccCchhhHHHhcCCHHHHHHHHHHHHHHHHhhhccCCCCcee-eccc
Q 003980 76 RLGVPSYEWWGEALHGVSNVGPAVRFNAMVPGATSFPAVILSAASFNASLWLKMGQVVSTEARAMYNVGQAGLTY-WSPN 154 (782)
Q Consensus 76 rlgip~~~~~~~~~~g~~~~g~g~~~~~~~~~~t~fP~~~~laat~d~~l~~~~g~~~g~E~ra~~~~~~~Gi~~-~aP~ 154 (782)
++|||.+ +..|..||.... ..+.|.||+++++|||||++|++++|+++|+|+|++ |+|+ |+|+
T Consensus 70 ~~~iPll-i~~D~egG~v~r---------~~~~t~~P~~~~laat~d~~l~~~~g~~~a~E~ra~------Gi~~~~aPv 133 (351)
T 3tev_A 70 VMGEHAL-IAIDHEGGAITR---------PEFWPFAPSAMSLGAADDQQLTEDVNAALARQLRSV------GINWNFTPV 133 (351)
T ss_dssp HHCTTCE-EEECC----------------------CCCHHHHHHHCCHHHHHHHHHHHHHHHHHH------TCCEECCCB
T ss_pred HhCCCCc-eeEeCCCCeEeC---------CCCCCCCCCHHHHHhcCCHHHHHHHHHHHHHHHHHc------CCCEeccce
Confidence 4689988 578888885321 125789999999999999999999999999999999 9998 9999
Q ss_pred ccccCCCCCCccc-CCCCCChHHHHHHHHHHHHHHhhccCCCCCCCCCceeeeeeccccccccCCCCCCcccccccccCH
Q 003980 155 VNVFRDPRWGRGQ-ETPGEDPLVVSKYAVNYVRGLQEIGDSKNSSSDRLKVSSCCKHYTAYDVDNWKGVDRFHFDAKVTK 233 (782)
Q Consensus 155 ~dv~r~p~~gR~~-esfgeDP~l~~~~a~a~v~GlQ~~~~g~~~~~~~~~v~a~~KHF~g~g~~~~~~~~r~~~~~~~~~ 233 (782)
+||.|||+|||.+ |+|||||+++++|+.|||+|||+. | |++|+|||||||.+..+.+ +....+.+++
T Consensus 134 ~Dv~r~p~~~rig~RsfgeDP~lv~~~a~a~v~Glq~~--g---------V~a~~KHFpG~g~~~~dsh-~~~~~~~~s~ 201 (351)
T 3tev_A 134 LDINVNPANPVIGDRAYGSDAARVTRHGRAALAGHTRE--G---------VAPCAKHFPGHGDTHQDSH-LALPRVSKSR 201 (351)
T ss_dssp CCCCCCTTCCSSGGGSSCSSHHHHHHHHHHHHHHHHTT--T---------CEECEEEETCCTTCBCSST-TSCCEECCCH
T ss_pred eEeccCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHc--C---------CeEEeeeccCCCCCcCCCC-cCCCcCCCCH
Confidence 9999999999975 699999999999999999999998 8 9999999999986532221 1112346799
Q ss_pred HHHHhhcCHHHHHHHHcCCcceEEee---ccccCC-ccccCCHHHHHHHhhhhcCcCcEEEcCchhhhhhhccccccCCh
Q 003980 234 QDLEDTYQPPFKSCVQEGHVSSVMCS---YNRVNG-IPTCADPNLLKGVVRDQWGLDGYIVSDCDSIQVYDTAIRYTATP 309 (782)
Q Consensus 234 ~~l~e~~l~PF~~ai~~g~~~~vM~s---y~~vng-~pa~~s~~ll~~iLR~e~Gf~G~VvSD~~~~~~~~~~~~~~~~~ 309 (782)
++|+|+||+||+++ ++| +.+|||| ||.||| .|||+|+++|++|||+||||+|+|||||++|+++... .+.
T Consensus 202 ~~L~e~~l~PF~~a-~ag-~~~VM~aHi~y~~id~~~Pa~~s~~ll~~lLR~elGF~G~VvSD~~~m~~i~~~----~~~ 275 (351)
T 3tev_A 202 AELDAGELAPFRAL-LPE-TPAIMTAHIVYDALDAEHPATLSPRILTGLLREEWGYDGVIVTDSMGMQAIDAN----YGR 275 (351)
T ss_dssp HHHHHTTTHHHHHH-GGG-CSEEEECSCEETTTBSSSCGGGCHHHHCCCCCCCSCCCSEEEECCTTSHHHHHH----SCH
T ss_pred HHHHHhhhHHHHHH-hcC-CCEEEecceEecCCCCCcCccCCHHHHHHHHHhhcCCCeEEEeccchHHHHHhc----CCH
Confidence 99999999999999 776 5699999 889998 7999999999999999999999999999999988753 246
Q ss_pred HHHHHHHHHcCCCccCCcc-------hhHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHhCCCCCCCC
Q 003980 310 EDAVALALNAGLNMNCGDY-------LGKYTENAVNMSKVKESVVDQALIYNYIVLMRLGFFDGDPK 369 (782)
Q Consensus 310 ~ea~~~al~AG~D~~~~~~-------~~~~l~~av~~G~i~~~~ld~av~RiL~~k~~~Glf~~~p~ 369 (782)
.+++++|++||+||+|... +.+.|.++|++ ++++||+||+|||++|+++|+|+ +|+
T Consensus 276 ~~~~~~Al~AG~D~~l~~~~~~~~~~~~~~l~~av~~---~~~~id~av~RIL~~k~~~g~f~-~Py 338 (351)
T 3tev_A 276 GEAAVRALRAGADLVMALGRREVQQATLAAVAEYVPE---NQAAVATKRERLRALARRFPAQA-DET 338 (351)
T ss_dssp HHHHHHHHHHTCSBEECCSSHHHHHHHHHHHHHHGGG---CHHHHHHHHHHHHHHHHHSCCCC----
T ss_pred HHHHHHHHHcCCCEECCCCChhHHHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHhCCCC-CCC
Confidence 7999999999999998632 34678899998 99999999999999999999999 553
No 9
>4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A*
Probab=100.00 E-value=3e-52 Score=451.05 Aligned_cols=249 Identities=19% Similarity=0.223 Sum_probs=208.1
Q ss_pred CCCcccccccccccccccCCceeccCCCCCcccCchhhHHHhcCCH----HHHHHHHHHHHHHHHhhhccCCCCcee-ec
Q 003980 78 GVPSYEWWGEALHGVSNVGPAVRFNAMVPGATSFPAVILSAASFNA----SLWLKMGQVVSTEARAMYNVGQAGLTY-WS 152 (782)
Q Consensus 78 gip~~~~~~~~~~g~~~~g~g~~~~~~~~~~t~fP~~~~laat~d~----~l~~~~g~~~g~E~ra~~~~~~~Gi~~-~a 152 (782)
+||.+ +..|..+|..+ ++ ..++|.||+++++|||||+ +|++++|+++|+|+|++ |+|+ |+
T Consensus 54 ~iPll-i~vD~egG~v~-----r~---~~g~t~fP~~~~lgat~d~~~~~~la~~~g~~~a~Elra~------Gin~~fa 118 (349)
T 4gvf_A 54 RNHLV-VAVDQEGGRVQ-----RF---REGFTRLPAAQSFFALHGLEEGGRLAQEAGWLMASEMIAM------DIDISFA 118 (349)
T ss_dssp SSCCE-EEECEEETTEE-----SC---CTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT------TCCEECC
T ss_pred CCCce-eeecCCCceee-----cc---CCCCCCCccHHHHHHhcCcchHHHHHHHHHHHHHHHHHHc------CCCEEec
Confidence 68987 67788877532 22 2368999999999999999 89999999999999999 9998 99
Q ss_pred ccccccC-CCCCCcccCCCCCChHHHHHHHHHHHHHHhhccCCCCCCCCCceeeeeeccccccccCCCCCCccccccccc
Q 003980 153 PNVNVFR-DPRWGRGQETPGEDPLVVSKYAVNYVRGLQEIGDSKNSSSDRLKVSSCCKHYTAYDVDNWKGVDRFHFDAKV 231 (782)
Q Consensus 153 P~~dv~r-~p~~gR~~esfgeDP~l~~~~a~a~v~GlQ~~~~g~~~~~~~~~v~a~~KHF~g~g~~~~~~~~r~~~~~~~ 231 (782)
|++||.| +|.|| +|+|||||+++++|+.|+|+|||+. | |++|+|||||||.+..+.+.... ....
T Consensus 119 Pv~Dv~r~~~~ig--~rsfgeDP~lv~~~a~a~v~Glq~~--G---------V~a~~KHFpG~G~~~~dsh~~~~-v~~~ 184 (349)
T 4gvf_A 119 PVLDVGHISAAIG--ERSYHADPAKALAMATRFIDGMHDA--G---------MKTTGKHFPGHGAVTADSHKETP-CDPR 184 (349)
T ss_dssp CBCCCCSCCTTTG--GGSSCSSHHHHHHHHHHHHHHHHHH--T---------CCCEEEEETCCTTCCCCSSSSCC-BCCC
T ss_pred CcccCCCCCCCCc--CcCCCCCHHHHHHHHHHHHHHHHHc--C---------ceeeecccccCCCcccCCCCCCC-CCCc
Confidence 9999998 57766 8999999999999999999999998 8 99999999999976433221111 1235
Q ss_pred CHHHHHhhcCHHHHHHHHcCCcceEEee---ccccCCccccCCHHHHHHHhhhhcCcCcEEEcCchhhhhhhccccccCC
Q 003980 232 TKQDLEDTYQPPFKSCVQEGHVSSVMCS---YNRVNGIPTCADPNLLKGVVRDQWGLDGYIVSDCDSIQVYDTAIRYTAT 308 (782)
Q Consensus 232 ~~~~l~e~~l~PF~~ai~~g~~~~vM~s---y~~vng~pa~~s~~ll~~iLR~e~Gf~G~VvSD~~~~~~~~~~~~~~~~ 308 (782)
+.++|+|.||+||+.+|++|.+.+|||| ||+|||.|||+|+++|++|||+||||+|+|||||++|.++. ...+
T Consensus 185 s~~el~~~~l~PF~~aI~~g~~~~VM~aHv~y~~id~~Pa~~S~~ll~~lLR~elGF~G~VvSD~l~m~~~~----~~~~ 260 (349)
T 4gvf_A 185 PETDIRGKDMSVFRTLISENKLDAIMPAHVIYRAIDPRPASGSPYWLKTVLRQELGFDGVIFSDDLSMEGAA----IMGS 260 (349)
T ss_dssp CHHHHHHTHHHHHHHHHHTTCCSEEEECSCBCTTTCSSCGGGCHHHHCCCCCCCTCCCSEEEEEEGGGCCCG----GGCC
T ss_pred CHHHHHHHHhHHHHHHHHcCCCCeEeecccccCCCCCCCCcCCHHHHHHHHHHhcCCCEEEEecCCcccccc----ccCC
Confidence 7899999999999999999967799999 99999999999999999999999999999999999997653 3567
Q ss_pred hHHHHHHHHHcCCCccCCcc---hhHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHh
Q 003980 309 PEDAVALALNAGLNMNCGDY---LGKYTENAVNMSKVKESVVDQALIYNYIVLMRL 361 (782)
Q Consensus 309 ~~ea~~~al~AG~D~~~~~~---~~~~l~~av~~G~i~~~~ld~av~RiL~~k~~~ 361 (782)
..|++++|++||+||+|.+. ....+++++.. ++++|+++++.|++.-.+.+
T Consensus 261 ~~eaa~~Al~AG~Dm~l~~~~~~~~~~~l~al~~--~~~~r~~~~~~r~~~~~~~l 314 (349)
T 4gvf_A 261 YAERAQASLDAGCDMILVCNNRKGAVSVLDNLSP--IKAERVTRLYHKGSFSRREL 314 (349)
T ss_dssp HHHHHHHHHHHTCSEEEECSCHHHHHHHHHHSCC--CCCGGGGGGCCCCCCCHHHH
T ss_pred HHHHHHHHHHcCCCEEcCCCCHHHHHHHHHHhhh--ccHHHHHHHhhcCCCCHHHH
Confidence 88999999999999998643 23456677764 67788888777664444443
No 10
>4g6c_A Beta-hexosaminidase 1; ssgcid, niaid, structural genomics, Na institute of allergy and infectious diseases; 1.38A {Burkholderia cenocepacia} PDB: 4gnv_A*
Probab=100.00 E-value=8.9e-52 Score=447.74 Aligned_cols=250 Identities=19% Similarity=0.203 Sum_probs=202.9
Q ss_pred CCCCCCcccccccccccccccCCceeccCCCCCcccCchhhHHHhcCCH------HHHHHHHHHHHHHHHhhhccCCCCc
Q 003980 75 PRLGVPSYEWWGEALHGVSNVGPAVRFNAMVPGATSFPAVILSAASFNA------SLWLKMGQVVSTEARAMYNVGQAGL 148 (782)
Q Consensus 75 ~rlgip~~~~~~~~~~g~~~~g~g~~~~~~~~~~t~fP~~~~laat~d~------~l~~~~g~~~g~E~ra~~~~~~~Gi 148 (782)
.+++||.+ +..|..+|..+ ++. ..++|.||+++++|||||+ +|++++|+++|+|+|++ |+
T Consensus 60 ~~~~iPll-i~vD~EgG~v~-----r~~--~~g~t~fP~~~~laat~d~d~~~~~~la~~~g~~~a~El~a~------Gi 125 (348)
T 4g6c_A 60 RAVREDIL-IAVDHEGGRVQ-----RFR--TDGFTVLPAMRRLGELWDRDVLLATKVATAVGYILAAELRAC------GI 125 (348)
T ss_dssp HHHCTTCE-EEECEEETTEE-----SCC--STTCCCCCCHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT------TC
T ss_pred HHhCCCce-EEecCCCCcee-----cCC--CCCCCCCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHc------CC
Confidence 44678877 57777777421 221 0358999999999999997 79999999999999999 99
Q ss_pred ee-ecccccccCCCCCCcccCCCCCChHHHHHHHHHHHHHHhhccCCCCCCCCCceeeeeeccccccccCCCCCCccccc
Q 003980 149 TY-WSPNVNVFRDPRWGRGQETPGEDPLVVSKYAVNYVRGLQEIGDSKNSSSDRLKVSSCCKHYTAYDVDNWKGVDRFHF 227 (782)
Q Consensus 149 ~~-~aP~~dv~r~p~~gR~~esfgeDP~l~~~~a~a~v~GlQ~~~~g~~~~~~~~~v~a~~KHF~g~g~~~~~~~~r~~~ 227 (782)
|+ |+|++||..++.+-++.|+|||||+++++|+.|||+|||+. | |++|+|||||||.+..+.+....
T Consensus 126 ~~~~aPv~Dv~~gr~~~iG~rsfgeDP~lv~~~a~A~v~Glq~~--G---------V~a~~KHFpG~G~~~~dsh~~~~- 193 (348)
T 4g6c_A 126 DMSFTPVLDLDYGHSKVIGDRAFHRDPRVVTLLAKSLNHGLSLA--G---------MANCGKHFPGHGFAEADSHVALP- 193 (348)
T ss_dssp CEECCCBCCCCCSCCTTTGGGSCCSSHHHHHHHHHHHHHHHHHT--T---------CCCCEEEETCSSSCCC----CCC-
T ss_pred CEeecCccCCCCCCCCCccCcCCCCCHHHHHHHHHHHHHHHHhc--C---------CceeeCCCCCCCCccCCCCCCCC-
Confidence 98 99999998443333456999999999999999999999998 8 99999999999976432221111
Q ss_pred ccccCHHHHHhhcCHHHHHHHHcCCcceEEee---ccccCCccccCCHHHHHHHhhhhcCcCcEEEcCchhhhhhhcccc
Q 003980 228 DAKVTKQDLEDTYQPPFKSCVQEGHVSSVMCS---YNRVNGIPTCADPNLLKGVVRDQWGLDGYIVSDCDSIQVYDTAIR 304 (782)
Q Consensus 228 ~~~~~~~~l~e~~l~PF~~ai~~g~~~~vM~s---y~~vng~pa~~s~~ll~~iLR~e~Gf~G~VvSD~~~~~~~~~~~~ 304 (782)
-...+.++|++.||+||+++ ++| +++|||| ||++||+|||+|+++|++|||+||||+|+|||||++|.++.
T Consensus 194 v~~~~~~el~~~~l~PF~~a-~ag-~~~VM~aHv~y~~id~~Pa~~S~~ll~~lLR~elGF~G~VvSD~l~m~~~~---- 267 (348)
T 4g6c_A 194 TDDRTLDAILEQDVAPYDWL-GLS-LAAVIPAHVIYTQVDKRPAGFSRVWLQDILRGKLGFTGAIFSDDLSMEAAR---- 267 (348)
T ss_dssp EECCCHHHHHHTTSHHHHHH-GGG-CCEEEECSCEETTTCSSCGGGCHHHHCCCCCCCSCCCSEEEEEETTCGGGG----
T ss_pred cCCCCHHHHHHHHHHHHHHH-hcC-CCeEEecceeecCCCCccccCCHHHHHHHHhhccCCCeEEEccCCchhhhh----
Confidence 11246778888899999999 877 5799999 99999999999999999999999999999999999998764
Q ss_pred ccCChHHHHHHHHHcCCCccCCcc---hhHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHh
Q 003980 305 YTATPEDAVALALNAGLNMNCGDY---LGKYTENAVNMSKVKESVVDQALIYNYIVLMRL 361 (782)
Q Consensus 305 ~~~~~~ea~~~al~AG~D~~~~~~---~~~~l~~av~~G~i~~~~ld~av~RiL~~k~~~ 361 (782)
...+..|++++|++||+||+|... ....++++|+. +.++++++||++++.+.
T Consensus 268 ~~~~~~e~a~~Al~AG~Dm~l~~~~~~~~~~~~~al~~-----~~~~~~~~Ri~~l~~r~ 322 (348)
T 4g6c_A 268 EGGTLTQAADAALAAGCDMVLVCNQPDAAEVVLNGLKA-----RASAESVRRIKRMRARG 322 (348)
T ss_dssp TTCCHHHHHHHHHHHTCSEEECCSCHHHHHHHHHHCCC-------CHHHHHHHHTTSCCS
T ss_pred hcCCHHHHHHHHHHcCCCEECCCCChHHHHHHHHHhhc-----ccchHHHHHHHHHHhcc
Confidence 356788999999999999998744 34556666654 56789999999998653
No 11
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A
Probab=100.00 E-value=6.4e-52 Score=448.05 Aligned_cols=245 Identities=18% Similarity=0.209 Sum_probs=207.2
Q ss_pred CCCcccccccccccccccCCceeccCCCCCcccCchhhHHHhcCC--HHHHHHHHHHHHHHHHhhhccCCCCcee-eccc
Q 003980 78 GVPSYEWWGEALHGVSNVGPAVRFNAMVPGATSFPAVILSAASFN--ASLWLKMGQVVSTEARAMYNVGQAGLTY-WSPN 154 (782)
Q Consensus 78 gip~~~~~~~~~~g~~~~g~g~~~~~~~~~~t~fP~~~~laat~d--~~l~~~~g~~~g~E~ra~~~~~~~Gi~~-~aP~ 154 (782)
+||.+ +..|..+|... ++ ..++|.||+++++|| || ++|++++|+++|+|+|++ |+|+ |+|+
T Consensus 54 ~iPll-i~~D~egG~v~-----r~---~~~~t~fP~~~~laa-~d~~~~la~~~g~~~a~E~ra~------Gi~~~~aPv 117 (340)
T 2oxn_A 54 KRPIL-IGVDQEGGRVQ-----RF---REGFSRIPPAQYYAR-AENGVELAEQGGWLMAAELIAH------DVDLSFAPV 117 (340)
T ss_dssp SSCCE-EEECEEETTEE-----SC---CTTSCCCCCGGGGGG-STTHHHHHHHHHHHHHHHHHTT------TCCEECCCB
T ss_pred CCCeE-eeecCCCeeEe-----cc---CCCCCCCCCHHHHhC-CCcHHHHHHHHHHHHHHHHHHh------CCCEEecCc
Confidence 68887 67787777531 22 235899999999999 99 999999999999999999 9998 9999
Q ss_pred ccccCCCCCCcccCCCCCChHHHHHHHHHHHHHHhhccCCCCCCCCCceeeeeeccccccccCCCCCCcccccccccC-H
Q 003980 155 VNVFRDPRWGRGQETPGEDPLVVSKYAVNYVRGLQEIGDSKNSSSDRLKVSSCCKHYTAYDVDNWKGVDRFHFDAKVT-K 233 (782)
Q Consensus 155 ~dv~r~p~~gR~~esfgeDP~l~~~~a~a~v~GlQ~~~~g~~~~~~~~~v~a~~KHF~g~g~~~~~~~~r~~~~~~~~-~ 233 (782)
+||.|+ +|.|+.|+|||||+++++|+.|+|+|||+. | |++|+|||||||.+..+.+- +..++ .
T Consensus 118 ~Dv~~~-~~~ig~rsfgeDP~lv~~~a~a~v~Glq~~--g---------V~a~~KHFpG~G~~~~dsh~----~~~v~~~ 181 (340)
T 2oxn_A 118 LDMGFA-CKAIGNRAFGEDVQTVLKHSSAFLRGMKAV--G---------MATTGKHFPGHGAVIADSHL----ETPYDER 181 (340)
T ss_dssp CCCCSC-STTTGGGSSCSSHHHHHHHHHHHHHHHHHT--T---------CCCEEEEETCCTTCCSCCSS----SSCBCCC
T ss_pred cCCCCC-CCcCcCCCCCCCHHHHHHHHHHHHHHHHHC--C---------ceeeeccCcCCCCccCCCCC----CCccCCH
Confidence 999999 888889999999999999999999999998 8 99999999999976533221 22222 3
Q ss_pred HHHHhhcCHHHHHHHHcCCcceEEee---ccccCCccccCCHHHHHHHhhhhcCcCcEEEcCchhhhhhhccccccCChH
Q 003980 234 QDLEDTYQPPFKSCVQEGHVSSVMCS---YNRVNGIPTCADPNLLKGVVRDQWGLDGYIVSDCDSIQVYDTAIRYTATPE 310 (782)
Q Consensus 234 ~~l~e~~l~PF~~ai~~g~~~~vM~s---y~~vng~pa~~s~~ll~~iLR~e~Gf~G~VvSD~~~~~~~~~~~~~~~~~~ 310 (782)
++| |.||+||+++|++|.+.+|||| ||++||+|||+|+++|++|||+||||+|+|||||++|+++.. ..+..
T Consensus 182 ~~l-~~~l~PF~~ai~~g~~~~VM~aHv~y~~id~~Pa~~s~~ll~~lLR~elGF~G~VvSD~l~m~~~~~----~~~~~ 256 (340)
T 2oxn_A 182 ETI-AQDMAIFRAQIEAGVLDAMMPAHVVYPHYDAQPASGSSYWLKQVLREELGFKGIVFSDDLSMEGAAV----MGGPV 256 (340)
T ss_dssp SCC-HHHHHHHHHHHHHTCCSEEEECSCBBTTTBSSCGGGCHHHHTCCCCCCTCCCSEEEEEEGGGSCHHH----HCSHH
T ss_pred HHH-HHHHHHHHHHHHcCCCCeeeeccccccccCCcCcccCHHHHHHHhhcccCCCeEEEcccchhhhhhc----cCCHH
Confidence 889 9999999999999966799999 999999999999999999999999999999999999986542 45778
Q ss_pred HHHHHHHHcCCCccCCcc---hhHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHh
Q 003980 311 DAVALALNAGLNMNCGDY---LGKYTENAVNMSKVKESVVDQALIYNYIVLMRL 361 (782)
Q Consensus 311 ea~~~al~AG~D~~~~~~---~~~~l~~av~~G~i~~~~ld~av~RiL~~k~~~ 361 (782)
+++++|++||+||+|.+. ....+.++|+ .++++|+++++.|+....+++
T Consensus 257 ea~~~Al~AG~Dm~l~~~~~~~~~~~~~av~--~~~~~Rl~~~~~~~~~~~~~l 308 (340)
T 2oxn_A 257 ERSHQALVAGCDMILICNKREAAVEVLDNLP--IMEVPQAEALLKKQQFSYSEL 308 (340)
T ss_dssp HHHHHHHHHTCSEEECCSCHHHHHHHHHHSC--CCCCGGGGGGSCSCCCCHHHH
T ss_pred HHHHHHHHcCCCEEcCCCCHHHHHHHHHHHH--HhhHHHHHHHhhcccccHHHH
Confidence 999999999999998643 3456778874 488999998887765433343
No 12
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=96.70 E-value=0.0039 Score=57.34 Aligned_cols=66 Identities=17% Similarity=0.113 Sum_probs=50.2
Q ss_pred CceEEEEEEEEeCCCCC-cceEEEEEEeCCCCCCCCCcchhhhcccccccCCCCEEEEEEEeccCCCceEEeCCCCEEEe
Q 003980 668 DLHFHVVIGVKNNGPMS-GSHVVLIFWKPPSASTAGAPNVELVGFERVDVQKGKTKNVTVGFDVCQGLNLVDTDGQRKLV 746 (782)
Q Consensus 668 ~~~~~v~v~VtNtG~~~-G~eVvQlY~~~~~~~~~~~p~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~e 746 (782)
++.++++|+|+|.|..+ +.--|.||+... +.+-.-+.|+||+|++|+|.+.+ . .
T Consensus 32 G~~~ti~vtV~N~G~~~a~~~~V~lyvng~-----------~v~t~~v~La~G~s~tv~f~~~~-~-------------~ 86 (127)
T 3idu_A 32 NKLAEYEVHVKNLGGIGVPSTKVRVYINGT-----------LYKNWTVSLGPKEEKVLTFNWTP-T-------------Q 86 (127)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEEEEETTE-----------EEEEEEEEECTTCEEEEEEEECC-S-------------S
T ss_pred CCEEEEEEEEEECCCCccCCcEEEEEECCE-----------EEeeEEeccCCCCeEEEEEEEEc-C-------------C
Confidence 46799999999999865 777899999432 22233457999999999999987 4 4
Q ss_pred CeEEEEEEeCCC
Q 003980 747 IGLHTLIVGSPS 758 (782)
Q Consensus 747 ~G~y~i~vG~ss 758 (782)
+|.|.|.+=-.+
T Consensus 87 ~G~~~v~AvVD~ 98 (127)
T 3idu_A 87 EGMYRINATVDE 98 (127)
T ss_dssp CEEEEEEEEEST
T ss_pred CcEEEEEEEEcC
Confidence 788888765443
No 13
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=95.58 E-value=0.028 Score=50.55 Aligned_cols=66 Identities=18% Similarity=0.170 Sum_probs=50.8
Q ss_pred CceEEEEEEEEeCCCC-CcceEEEEEEeCCCCCCCCCcchhhhccccc-ccCCCCEEEEEEEeccCCCceEEeCCCCEEE
Q 003980 668 DLHFHVVIGVKNNGPM-SGSHVVLIFWKPPSASTAGAPNVELVGFERV-DVQKGKTKNVTVGFDVCQGLNLVDTDGQRKL 745 (782)
Q Consensus 668 ~~~~~v~v~VtNtG~~-~G~eVvQlY~~~~~~~~~~~p~k~L~gF~kv-~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~ 745 (782)
++.++++++|+|.|.. ++.-.|-+|+..- +.+...+ .|.+|+|++|+|++.+..
T Consensus 18 ~~~~ti~atVkN~G~~~a~~~~V~ly~~g~-----------~v~t~~v~~LaaG~s~tv~~~w~~~~------------- 73 (114)
T 2l0d_A 18 NTVNTMTATIENQGNKDSTSFNVSLLVDGI-----------VVDTQTVTSLESENSTNVDFHWTLDG------------- 73 (114)
T ss_dssp TSEEEEEEEEEECSSSCBCCEEEEEEETTE-----------EEEEEEESCBCBTCEEEEEEEEECCC-------------
T ss_pred CCeEEEEEEEEECCCCCCCCEEEEEEECCE-----------EEcceecccccCCCEEEEEEEEeecC-------------
Confidence 4689999999999975 5778899998542 3445567 599999999999888621
Q ss_pred eCeEEEEEEeCC
Q 003980 746 VIGLHTLIVGSP 757 (782)
Q Consensus 746 e~G~y~i~vG~s 757 (782)
++|.|+|.+=-.
T Consensus 74 ~~G~ytl~a~VD 85 (114)
T 2l0d_A 74 TANSYTLTVNVD 85 (114)
T ss_dssp SCSEEEEEEEEC
T ss_pred cCceEEEEEEEC
Confidence 379999987433
No 14
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=95.55 E-value=0.01 Score=54.04 Aligned_cols=75 Identities=15% Similarity=0.151 Sum_probs=50.3
Q ss_pred CceEEEEEEEEeCCCC-CcceEEEEEEeCCCCCCCCCcchhhhccccc-ccCCCCEEEEEEEeccCCCceEEeCCCCEEE
Q 003980 668 DLHFHVVIGVKNNGPM-SGSHVVLIFWKPPSASTAGAPNVELVGFERV-DVQKGKTKNVTVGFDVCQGLNLVDTDGQRKL 745 (782)
Q Consensus 668 ~~~~~v~v~VtNtG~~-~G~eVvQlY~~~~~~~~~~~p~k~L~gF~kv-~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~ 745 (782)
++.++|+++|+|.|.. ++.--|.+|+..|... . .+.|-..| .|+||+|.+++|++.... . -.|..
T Consensus 15 g~~vTvsatVkN~Gt~~s~a~~V~~yl~~p~~g--g----~~vgt~tv~~LaaG~s~t~~v~~~~~~-~------~~~~a 81 (122)
T 2kut_A 15 GEEITVSARVTNRGAAEAHNVPVAVYLGNPAQG--G----VEIGRDTISRIPVGGTGLARVQWKATR-K------LAGRA 81 (122)
T ss_dssp TCEEEEEEEEECCSSSCBCCCCEEECSSCTTTC--C----CCCBCCCCSCBCTTCEEECCEEEECCC-C------CSSCC
T ss_pred CCeEEEEEEEEeCCCcccCcEEEEEEeCCCccC--C----eEEeeEEccccCCCCeEEEEEEEecCC-c------ccccc
Confidence 4689999999999975 5677899999997543 2 23333345 499999999666655411 0 11233
Q ss_pred eCeEEEEEEe
Q 003980 746 VIGLHTLIVG 755 (782)
Q Consensus 746 e~G~y~i~vG 755 (782)
.+|.|.|.+=
T Consensus 82 ~~Gsy~v~Av 91 (122)
T 2kut_A 82 ANPGVPVYAV 91 (122)
T ss_dssp SCCCCCCCEE
T ss_pred cCceEEEEEE
Confidence 4577777543
No 15
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=90.77 E-value=0.84 Score=41.21 Aligned_cols=72 Identities=10% Similarity=0.066 Sum_probs=47.2
Q ss_pred CceEEEEEEEEeCCCCCcc------eEEEEEEeCCCCCC-----CCCcchhhhcccccccCCCCEEEEEEEeccCCCceE
Q 003980 668 DLHFHVVIGVKNNGPMSGS------HVVLIFWKPPSAST-----AGAPNVELVGFERVDVQKGKTKNVTVGFDVCQGLNL 736 (782)
Q Consensus 668 ~~~~~v~v~VtNtG~~~G~------eVvQlY~~~~~~~~-----~~~p~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~ 736 (782)
++.+.+.++|+|.|+.+-. --..+.|.+..... -.+---+ .+..+.|+|||+.+.+++++.
T Consensus 17 g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQ--a~~~~tl~pGE~~~f~~~w~~------ 88 (120)
T 3isy_A 17 PEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQ--AFQNLTLESGETYDFSDVWKE------ 88 (120)
T ss_dssp SSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCC--CCEEEEECTTCEEEEEEEESS------
T ss_pred CCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhh--hhceEEECCCCEEEEEEEeCC------
Confidence 4579999999999974321 12344555533220 1111112 566778999999999999983
Q ss_pred EeCCCCEEEeCeEEEEEE
Q 003980 737 VDTDGQRKLVIGLHTLIV 754 (782)
Q Consensus 737 ~d~~~~~~~e~G~y~i~v 754 (782)
.++||.|++.+
T Consensus 89 -------~~~pG~Ytl~a 99 (120)
T 3isy_A 89 -------VPEPGTYEVKV 99 (120)
T ss_dssp -------CCCSEEEEEEE
T ss_pred -------CCCCccEEEEE
Confidence 25799999864
No 16
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=87.90 E-value=1.2 Score=51.44 Aligned_cols=103 Identities=14% Similarity=0.145 Sum_probs=65.5
Q ss_pred ccccCCCCCccCcccccccCCccceeecccCcccCCcccccccccccCCCceEEEEEEEEeCCC--CCcceEEEEEEeCC
Q 003980 619 VYPFGHGLSYSSFSKFIVSAPSTVLIKKNRNSIHSSHAQAIDVTTVNCKDLHFHVVIGVKNNGP--MSGSHVVLIFWKPP 696 (782)
Q Consensus 619 ~ypFG~GLSYTtF~ys~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~VtNtG~--~~G~eVvQlY~~~~ 696 (782)
+|..|.|+.|..|..+.+...... ... + ...+. .+++.+|+++|+|.+. ++|.+++ ||+...
T Consensus 338 ~ye~~~~i~~~~~~~~~l~~~~~~-~~~------~--~~~~~------~g~~~~~~~~vtn~~~~~~~~~~~~-~~~~~~ 401 (601)
T 1w8o_A 338 LYEPGTGIRYANFNLAWLGGICAP-FTI------P--DVALE------PGQQVTVPVAVTNQSGIAVPKPSLQ-LDASPD 401 (601)
T ss_dssp EECCSSEEEEEEECHHHHTBCSCC-EEC------C--CEEEC------TTCEEEEEEEEECCSSSCBSSCEEE-EECCTT
T ss_pred EEecCCcceEEEecHHHhccccCC-CcC------c--cceec------CCceeEEEEEEECCCceeccCceEE-EecCCC
Confidence 466667888888888877632100 000 0 00011 2358899999999976 7898887 888443
Q ss_pred CCCCCCCcchhhhcccccccCCCCEEEEEEEeccCCCceEEeCCCCEEEeCeEEEEEEeCCC
Q 003980 697 SASTAGAPNVELVGFERVDVQKGKTKNVTVGFDVCQGLNLVDTDGQRKLVIGLHTLIVGSPS 758 (782)
Q Consensus 697 ~~~~~~~p~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~e~G~y~i~vG~ss 758 (782)
... .. .-..++||++.++.|+|.. .+- +++|.|.+.+.-.+
T Consensus 402 ~~~----~~------~~~~~~~g~~~t~~~~vt~-~~~----------~~~g~y~l~~~~~~ 442 (601)
T 1w8o_A 402 WQV----QG------SVEPLMPGRQAKGQVTITV-PAG----------TTPGRYRVGATLRT 442 (601)
T ss_dssp SEE----EE------EECCBCTTCEEEEEEEEEC-CTT----------CCCEEEEEEEEEEE
T ss_pred cEE----ec------cccccCCCCceEEEEEEec-CCC----------CCCCcEEeeEEEEe
Confidence 322 11 2267899999999888887 331 45788877766554
No 17
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=84.05 E-value=1.5 Score=39.98 Aligned_cols=15 Identities=27% Similarity=0.368 Sum_probs=13.6
Q ss_pred ccCCCCEEEEEEEec
Q 003980 715 DVQKGKTKNVTVGFD 729 (782)
Q Consensus 715 ~L~pGes~~V~~~l~ 729 (782)
.|.||||.+|+|+++
T Consensus 85 ~l~pGes~~vtf~~~ 99 (128)
T 2iaa_C 85 VIGGGETDSVTFDVS 99 (128)
T ss_dssp CBCTTCEEEEEEESS
T ss_pred eeCCCCEEEEEEecc
Confidence 479999999999987
No 18
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=83.29 E-value=1.9 Score=39.46 Aligned_cols=15 Identities=13% Similarity=0.206 Sum_probs=13.7
Q ss_pred ccCCCCEEEEEEEec
Q 003980 715 DVQKGKTKNVTVGFD 729 (782)
Q Consensus 715 ~L~pGes~~V~~~l~ 729 (782)
.|.||||.+|+|+++
T Consensus 86 ~l~pGet~svtf~~~ 100 (129)
T 1cuo_A 86 IIGGGEKTSVKFKVS 100 (129)
T ss_dssp CBCTTCEEEEEEEGG
T ss_pred EECCCCEEEEEEecc
Confidence 479999999999987
No 19
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=83.16 E-value=1.5 Score=37.66 Aligned_cols=53 Identities=15% Similarity=0.161 Sum_probs=32.2
Q ss_pred EEEEEEEEeCCCCCcceEEEEEEeCCCCC---CCCCcchhhhcc-------cccccCCCCEEEEEEE
Q 003980 671 FHVVIGVKNNGPMSGSHVVLIFWKPPSAS---TAGAPNVELVGF-------ERVDVQKGKTKNVTVG 727 (782)
Q Consensus 671 ~~v~v~VtNtG~~~G~eVvQlY~~~~~~~---~~~~p~k~L~gF-------~kv~L~pGes~~V~~~ 727 (782)
-+++++|+|||+++ ||+=-+..-.. .+..-...-.|| .-|..+||++|+|++.
T Consensus 20 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~r~V~LV 82 (101)
T 4ep8_B 20 ATCRVVVENHGDRP----IQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRFEPGQKREVELV 82 (101)
T ss_dssp CEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEECTTCEEEEEEE
T ss_pred CEEEEEEEeCCCcc----eEEccccChhHcCcceeecHhhccCceecccCCCeEeeCCCCeEEEEEE
Confidence 46889999999887 77744332111 022222222333 3456799999999874
No 20
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=81.11 E-value=1.9 Score=46.14 Aligned_cols=65 Identities=11% Similarity=0.061 Sum_probs=36.9
Q ss_pred ceEEEEEEEEeCCCCCc------------ceEEEEEEeC---CCCCC-CCCcchhhhcccccccCCCCEEEEEEEeccCC
Q 003980 669 LHFHVVIGVKNNGPMSG------------SHVVLIFWKP---PSAST-AGAPNVELVGFERVDVQKGKTKNVTVGFDVCQ 732 (782)
Q Consensus 669 ~~~~v~v~VtNtG~~~G------------~eVvQlY~~~---~~~~~-~~~p~k~L~gF~kv~L~pGes~~V~~~l~~~~ 732 (782)
+...|+++|||+|+.+= .+.++++-.. +.... +.+..-.+..| +.|+||||.+++|+|....
T Consensus 36 ~~~~vk~tvtN~g~~~~~lLk~~~lD~~~~~~~~V~~~G~~v~f~Gi~~~~~~~~~d~f--~~L~pG~Sve~~~dla~~y 113 (343)
T 2x3c_A 36 DDVRVNLTLTNTGDKPIRLLKWQLPGSDDAPLFLVERDGQPVSYEGALIKRAAPTDKDF--QLLKAGQSLTVQAEVSGLY 113 (343)
T ss_dssp SCCEEEEEEEECSSSCEEEEGGGSCSSSCCCCEEEEETTEECCBCSCCCCCCCCCGGGE--EEECTTCEEEEEEECTTTB
T ss_pred CCeEEEEEEEeCCCCceEeeccCCCCcCccceEEEEeCCcccceeeEEEeccCCChhhc--EEeCCCCeEEEEEehhhcc
Confidence 35789999999997541 1234443211 00000 11111123444 5689999999999997644
Q ss_pred Cce
Q 003980 733 GLN 735 (782)
Q Consensus 733 ~ls 735 (782)
||+
T Consensus 114 dLs 116 (343)
T 2x3c_A 114 DMS 116 (343)
T ss_dssp TCC
T ss_pred ccC
Confidence 453
No 21
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=78.24 E-value=3.1 Score=37.27 Aligned_cols=53 Identities=15% Similarity=0.075 Sum_probs=32.6
Q ss_pred EEEEEEEEeCCCCCcceEEEEEEeCCCCC---CCCCcchhhhcc-------cccccCCCCEEEEEEE
Q 003980 671 FHVVIGVKNNGPMSGSHVVLIFWKPPSAS---TAGAPNVELVGF-------ERVDVQKGKTKNVTVG 727 (782)
Q Consensus 671 ~~v~v~VtNtG~~~G~eVvQlY~~~~~~~---~~~~p~k~L~gF-------~kv~L~pGes~~V~~~ 727 (782)
-+++++|+|||+++ ||+=-+..-.. .+..-...-.|| .-|..+||++|+|++.
T Consensus 26 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ubp_B 26 EKTTIRVSNTGDRP----IQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp CEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred cEEEEEEEeCCCCC----EEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 46889999999887 77744432111 022222223333 2456799999999884
No 22
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=78.24 E-value=3.1 Score=37.27 Aligned_cols=53 Identities=15% Similarity=0.075 Sum_probs=32.6
Q ss_pred EEEEEEEEeCCCCCcceEEEEEEeCCCCC---CCCCcchhhhcc-------cccccCCCCEEEEEEE
Q 003980 671 FHVVIGVKNNGPMSGSHVVLIFWKPPSAS---TAGAPNVELVGF-------ERVDVQKGKTKNVTVG 727 (782)
Q Consensus 671 ~~v~v~VtNtG~~~G~eVvQlY~~~~~~~---~~~~p~k~L~gF-------~kv~L~pGes~~V~~~ 727 (782)
-+++++|+|||+++ ||+=-+..-.. .+..-...-.|| .-|..+||++|+|++.
T Consensus 26 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ac7_B 26 EKTTIRVSNTGDRP----IQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp CEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred cEEEEEEEeCCCCC----EEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 46889999999887 77744432111 022222223333 2456799999999884
No 23
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=77.75 E-value=4.8 Score=42.66 Aligned_cols=59 Identities=14% Similarity=0.213 Sum_probs=37.7
Q ss_pred CceEEEEEEEEeCCCCCcceEEEE---------EEeCCCCCCCCCcchhhhccccc------ccCCCCEEEEEEEecc
Q 003980 668 DLHFHVVIGVKNNGPMSGSHVVLI---------FWKPPSASTAGAPNVELVGFERV------DVQKGKTKNVTVGFDV 730 (782)
Q Consensus 668 ~~~~~v~v~VtNtG~~~G~eVvQl---------Y~~~~~~~~~~~p~k~L~gF~kv------~L~pGes~~V~~~l~~ 730 (782)
+.+++++++|||+|+ +.|+| |+.+.....-.--..+|.+.+.. -++|||+++|+++..-
T Consensus 263 gR~l~~~~~VtN~g~----~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~~pI~PGETr~~~v~a~d 336 (382)
T 1yew_A 263 GRAMRMKLTITNHGN----SPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNSPLAPGETRTVDVTASD 336 (382)
T ss_dssp CSEEEEEEEEEECSS----SCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCCSCBCTTCEEEEEEEEEC
T ss_pred CcEEEEEEEEEcCCC----CceEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCCCCcCCCceeEEEEEeeh
Confidence 468999999999974 45555 44432211011223466655433 2899999999998874
No 24
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.78 E-value=2.4 Score=37.19 Aligned_cols=62 Identities=6% Similarity=0.043 Sum_probs=37.4
Q ss_pred ceEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCCCcchhhhcccccccCCCCEEEEEEEeccCCCceEEe
Q 003980 669 LHFHVVIGVKNNGPMSGSHVVLIFWKPPSASTAGAPNVELVGFERVDVQKGKTKNVTVGFDVCQGLNLVD 738 (782)
Q Consensus 669 ~~~~v~v~VtNtG~~~G~eVvQlY~~~~~~~~~~~p~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~~d 738 (782)
...+.+++++|+|+.+.. ++..... ......--....+-.|+||++.+|++++.+ +....|+
T Consensus 26 ~~~~~~~~l~N~g~~p~~------~~~~~~~-~~~~~~f~v~p~~g~i~pg~~~~i~V~f~~-~~~g~f~ 87 (112)
T 2e6j_A 26 SAHCYEAILYNKGSIDAL------FNMTPPT-SALGACFVFSPKEGIIEPSGVQAIQISFSS-IILGNFE 87 (112)
T ss_dssp CCEEEEEEEEECCSSCEE------EEECCCS-SHHHHHCEEESSEEEECTTBCCEEEEEECC-CCCEEEE
T ss_pred CEEEEEEEEEECCcceEE------EEEecCC-ccccCcEEEECCcCEECCCCEEEEEEEEEC-CCcceEE
Confidence 357789999999997542 2221111 000000001234556999999999999998 6565554
No 25
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=73.28 E-value=5.8 Score=35.97 Aligned_cols=70 Identities=10% Similarity=0.141 Sum_probs=39.7
Q ss_pred EEEEEEEeCCCCC----cceEEEEEEeCCCC---CCC-CCcc--------hhhhcccccccCCCCEEEEEEEeccCCCce
Q 003980 672 HVVIGVKNNGPMS----GSHVVLIFWKPPSA---STA-GAPN--------VELVGFERVDVQKGKTKNVTVGFDVCQGLN 735 (782)
Q Consensus 672 ~v~v~VtNtG~~~----G~eVvQlY~~~~~~---~~~-~~p~--------k~L~gF~kv~L~pGes~~V~~~l~~~~~ls 735 (782)
+|+++++|+|+.+ |-++|-.=-..... ... .-|. .+...-.+ .|.|||+.+|+|+.+.=.
T Consensus 28 ~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~-~l~pGes~~vtf~~~~l~--- 103 (125)
T 3fsa_A 28 QFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTK-LIGSGEKDSVTFDVSKLK--- 103 (125)
T ss_dssp EEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECC-CBCTTCEEEEEEEGGGC----
T ss_pred EEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccc-eeCCCcEEEEEEeCcCcC---
Confidence 5788999999998 99988762111110 000 0000 01111112 279999999999988311
Q ss_pred EEeCCCCEEEeCeEEEEEEe
Q 003980 736 LVDTDGQRKLVIGLHTLIVG 755 (782)
Q Consensus 736 ~~d~~~~~~~e~G~y~i~vG 755 (782)
++|+|.++..
T Consensus 104 ----------~~G~y~f~C~ 113 (125)
T 3fsa_A 104 ----------EGEQYMFFCA 113 (125)
T ss_dssp ------------CCEEEECS
T ss_pred ----------CCccEEEEcC
Confidence 4677777655
No 26
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=69.80 E-value=4.2 Score=38.84 Aligned_cols=15 Identities=13% Similarity=0.175 Sum_probs=13.6
Q ss_pred ccCCCCEEEEEEEec
Q 003980 715 DVQKGKTKNVTVGFD 729 (782)
Q Consensus 715 ~L~pGes~~V~~~l~ 729 (782)
.|.|||+.+|+|+++
T Consensus 125 ~l~pGet~svtf~~~ 139 (167)
T 3ay2_A 125 LIGGGEESSLTLDPA 139 (167)
T ss_dssp CBCTTCEEEEEECGG
T ss_pred eeCCCCEEEEEEecC
Confidence 479999999999987
No 27
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=69.68 E-value=8 Score=35.16 Aligned_cols=15 Identities=20% Similarity=0.346 Sum_probs=13.7
Q ss_pred ccCCCCEEEEEEEec
Q 003980 715 DVQKGKTKNVTVGFD 729 (782)
Q Consensus 715 ~L~pGes~~V~~~l~ 729 (782)
.|.||||.+|+|+++
T Consensus 86 ~l~pGet~svtf~~~ 100 (129)
T 2ccw_A 86 VIGGGESDSVTFDVS 100 (129)
T ss_dssp CBCTTCEEEEEEEGG
T ss_pred EECCCCEEEEEEecc
Confidence 479999999999987
No 28
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=69.25 E-value=8.3 Score=35.05 Aligned_cols=15 Identities=20% Similarity=0.330 Sum_probs=13.7
Q ss_pred ccCCCCEEEEEEEec
Q 003980 715 DVQKGKTKNVTVGFD 729 (782)
Q Consensus 715 ~L~pGes~~V~~~l~ 729 (782)
.|.||||.+|+|+++
T Consensus 86 ~l~pGet~svtf~~~ 100 (128)
T 1nwp_A 86 VIGAGEKDSVTFDVS 100 (128)
T ss_dssp CBCTTCEEEEEEEGG
T ss_pred eeCCCCEEEEEEecc
Confidence 489999999999986
No 29
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=68.42 E-value=4 Score=36.52 Aligned_cols=66 Identities=14% Similarity=0.055 Sum_probs=41.9
Q ss_pred ceEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCCCcchhhhcccccccCCCCEEEEEEEeccCCCceEEeCCCCEEEeC
Q 003980 669 LHFHVVIGVKNNGPMSGSHVVLIFWKPPSASTAGAPNVELVGFERVDVQKGKTKNVTVGFDVCQGLNLVDTDGQRKLVI 747 (782)
Q Consensus 669 ~~~~v~v~VtNtG~~~G~eVvQlY~~~~~~~~~~~p~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~e~ 747 (782)
..-+.++.|+|+|+.+++--.+ ...|-+ ..|. +-.|+|||+.+|++++.+ .....|+..-.-.++.
T Consensus 41 ~~~~~~~~l~N~g~~~~~f~~~--~~~~F~---i~P~-------~g~L~pg~~~~i~V~F~P-~~~g~~~~~l~v~~~~ 106 (122)
T 2ys4_A 41 YSTQKILLVRNIGNKNAVFHIK--TCRPFS---IEPA-------IGTLNVGESMQLEVEFEP-QSVGDHSGRLIVCYDT 106 (122)
T ss_dssp SCEEEEEEEECCSSSCEEEEEE--CCTTEE---EESS-------EEEECTTCEEEEEEEECC-SSSBCCCCBCEEEESS
T ss_pred CeEEEEEEEEECCCCCEEEEEe--cCCCeE---EECC-------cCEECCCCEEEEEEEEEc-CCCccEEEEEEEEECC
Confidence 3567889999999987764332 111111 1222 246899999999999999 6566665443333333
No 30
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=63.97 E-value=24 Score=31.97 Aligned_cols=27 Identities=19% Similarity=0.038 Sum_probs=21.3
Q ss_pred ccccCCCCEEEEEEEeccCCCceEEeCCCCEEEeCeEEEEEEe
Q 003980 713 RVDVQKGKTKNVTVGFDVCQGLNLVDTDGQRKLVIGLHTLIVG 755 (782)
Q Consensus 713 kv~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~e~G~y~i~vG 755 (782)
...|.|||+.+++|+.+. ||+|.++..
T Consensus 98 t~~l~pGet~~v~f~~~~----------------pG~y~f~C~ 124 (139)
T 2aan_A 98 SPLANGNETVEVTFTAPA----------------AGTYLYICT 124 (139)
T ss_dssp CCCBCTTCEEEEEEECCS----------------SEEEEEECC
T ss_pred ccccCCCCEEEEEEECCC----------------CeEEEEEcC
Confidence 345899999999998753 688888775
No 31
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=58.79 E-value=17 Score=38.95 Aligned_cols=58 Identities=19% Similarity=0.252 Sum_probs=34.0
Q ss_pred CceEEEEEEEEeCCCCCcceEEEE---------EEeCCCCCCCCCcchhhh---c--ccccccCCCCEEEEEEEecc
Q 003980 668 DLHFHVVIGVKNNGPMSGSHVVLI---------FWKPPSASTAGAPNVELV---G--FERVDVQKGKTKNVTVGFDV 730 (782)
Q Consensus 668 ~~~~~v~v~VtNtG~~~G~eVvQl---------Y~~~~~~~~~~~p~k~L~---g--F~kv~L~pGes~~V~~~l~~ 730 (782)
+.+++++++|||+|+- -||| |+.+.....-.-...+|. | =.. -++|||+++|++++.-
T Consensus 297 gR~l~~~~~VtN~g~~----pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~s~~-pI~PGETrt~~V~a~d 368 (419)
T 3rfr_A 297 GRELTINVKVKNGTSQ----PVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLSNDD-VIAPGESKEIVVKIQD 368 (419)
T ss_dssp SSEEEEEEEEECCSSS----CBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCCCCC-CBCTTCEEEEEEEEEC
T ss_pred CcEEEEEEEEecCCCC----ceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCCCCC-CcCCCcceEEEEEeeh
Confidence 4689999999999754 3444 222111010011122332 2 233 5999999999999874
No 32
>3qga_A UREA2, fusion of urease beta and gamma subunits; iron metalloenzyme, alpha-beta barrel, hydrolase; HET: FME KCX; 3.00A {Helicobacter mustelae} PDB: 3qgk_A*
Probab=57.63 E-value=11 Score=37.08 Aligned_cols=53 Identities=19% Similarity=0.107 Sum_probs=31.8
Q ss_pred EEEEEEEEeCCCCCcceEEEEEEeCCCCC---CCCCcchhhhcc-------cccccCCCCEEEEEEE
Q 003980 671 FHVVIGVKNNGPMSGSHVVLIFWKPPSAS---TAGAPNVELVGF-------ERVDVQKGKTKNVTVG 727 (782)
Q Consensus 671 ~~v~v~VtNtG~~~G~eVvQlY~~~~~~~---~~~~p~k~L~gF-------~kv~L~pGes~~V~~~ 727 (782)
-+++++|+|||+++ ||+=-+..-.. .+..-...=.|| .-|..+||++++|++.
T Consensus 125 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 187 (225)
T 3qga_A 125 EITELKVTNKGPKS----LHVGSHFHFFEANRALEFDREKAYGKRLDIPSGNTLRIGAGETKTVHLI 187 (225)
T ss_dssp CCEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred ceEEEEEEECCCCc----eeeccccchhhcCchhhccHHHhCCcccccCCCCeEeeCCCCeeEEEEE
Confidence 35789999999887 67744432111 022222222333 2456789999999874
No 33
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=55.57 E-value=7.9 Score=47.12 Aligned_cols=61 Identities=21% Similarity=0.219 Sum_probs=38.1
Q ss_pred ceEEEEEEEEeCCCCCcceEEEEEEeC--C-CCCCCCCcchhhhcc--cccccCCCCEEEEEEEecc
Q 003980 669 LHFHVVIGVKNNGPMSGSHVVLIFWKP--P-SASTAGAPNVELVGF--ERVDVQKGKTKNVTVGFDV 730 (782)
Q Consensus 669 ~~~~v~v~VtNtG~~~G~eVvQlY~~~--~-~~~~~~~p~k~L~gF--~kv~L~pGes~~V~~~l~~ 730 (782)
+.++++++|+|+|+.+...+.++-+.. + .......|. .|.-+ ..+.|+|||+++++++++.
T Consensus 499 ~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~-~l~~~~~~~vtv~ag~~~~~~vt~~~ 564 (926)
T 1xf1_A 499 DKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPK-VLYETSWQKITIPANSSKQVTVPIDA 564 (926)
T ss_dssp SEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEE-EEEECCCEEEEECTTEEEEEEEEEEC
T ss_pred ccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccc-eeEeccCCeEEECCCCEEEEEEEEEc
Confidence 368899999999986654444433322 2 111011232 23322 4578999999999999986
No 34
>1e9y_A Urease subunit alpha; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.85.3.1 d.8.1.1 PDB: 1e9z_A*
Probab=55.14 E-value=10 Score=37.54 Aligned_cols=53 Identities=23% Similarity=0.085 Sum_probs=32.7
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCC---CCCCcchhhhcc-------cccccCCCCEEEEEEEe
Q 003980 672 HVVIGVKNNGPMSGSHVVLIFWKPPSAS---TAGAPNVELVGF-------ERVDVQKGKTKNVTVGF 728 (782)
Q Consensus 672 ~v~v~VtNtG~~~G~eVvQlY~~~~~~~---~~~~p~k~L~gF-------~kv~L~pGes~~V~~~l 728 (782)
+++++|+|||+++ ||+=-+..-.. .+......=.|| .-|..+||++++|++.=
T Consensus 126 ~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTAVRFEPG~~r~V~LV~ 188 (238)
T 1e9y_A 126 AVSVKVKNVGDRP----VQIGSHFHFFEVNRCLDFDREKTFGKRLDIAAGTAVRFEPGEEKSVELID 188 (238)
T ss_dssp CCEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSSTTCEEEECTTCEEEEEEEE
T ss_pred eEEEEEEeCCCCc----eEeccccchHhcCccccccHHHhCCcccCcCCCCeEeeCCCCeeEEEEEE
Confidence 5789999999887 77744432111 022233333333 24567999999998843
No 35
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=52.75 E-value=8.9 Score=38.43 Aligned_cols=49 Identities=12% Similarity=0.171 Sum_probs=33.0
Q ss_pred EEEeCCCCCcceEEEEEEeCCCCCC--------CCCcchhhhcccccccCCCCEEEEEEEecc
Q 003980 676 GVKNNGPMSGSHVVLIFWKPPSAST--------AGAPNVELVGFERVDVQKGKTKNVTVGFDV 730 (782)
Q Consensus 676 ~VtNtG~~~G~eVvQlY~~~~~~~~--------~~~p~k~L~gF~kv~L~pGes~~V~~~l~~ 730 (782)
++-|-|. |.=+|+||.+.+.... +.--.+.+..+.++.|.||||-| |.+
T Consensus 130 diinRgG--G~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiT----l~P 186 (246)
T 3kmh_A 130 DIINRGG--GNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESIC----LPP 186 (246)
T ss_dssp EEEEEEE--SCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEE----ECT
T ss_pred cEEecCC--CeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEe----cCC
Confidence 3456553 5677888888876330 11123567888999999999866 666
No 36
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=52.60 E-value=24 Score=32.32 Aligned_cols=56 Identities=14% Similarity=0.080 Sum_probs=33.9
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCCCcchhhhc-ccccccCCCCEEEEEEEecc
Q 003980 670 HFHVVIGVKNNGPMSGSHVVLIFWKPPSASTAGAPNVELVG-FERVDVQKGKTKNVTVGFDV 730 (782)
Q Consensus 670 ~~~v~v~VtNtG~~~G~eVvQlY~~~~~~~~~~~p~k~L~g-F~kv~L~pGes~~V~~~l~~ 730 (782)
..+-+++|+|||.++-.--.+ ..+..+....| -|.= =.+-.|+|||+..|++++..
T Consensus 44 ~~~~~l~I~Ntg~vpa~F~f~---~~~~~~~~~~~--wl~v~P~~G~L~Pge~~~I~v~~~v 100 (140)
T 3qbt_B 44 LQKEKFQISNNGQVPCHFSFI---PKLNDSQYCKP--WLRAEPFEGYLEPNETVDISLDVYV 100 (140)
T ss_dssp CEEEEEEEEECSSSCEEEEEE---CCTTCSSSSCT--TEEEESCEEEECTTCEEEEEEEECB
T ss_pred eeeeEEEEEcCCccceEEEEe---cCCCchhhhhH--hhhcCCcccccCCCCeeEEEEEEEE
Confidence 457799999999988754433 11111100111 0000 12346999999999999997
No 37
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=49.80 E-value=51 Score=30.60 Aligned_cols=65 Identities=18% Similarity=0.101 Sum_probs=33.7
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCCCCCCcch-hhhcccc--cccCCCC--EEEEEEEeccCCCceEEeCCCCEEEe
Q 003980 672 HVVIGVKNNGPMSGSHVVLIFWKPPSASTAGAPNV-ELVGFER--VDVQKGK--TKNVTVGFDVCQGLNLVDTDGQRKLV 746 (782)
Q Consensus 672 ~v~v~VtNtG~~~G~eVvQlY~~~~~~~~~~~p~k-~L~gF~k--v~L~pGe--s~~V~~~l~~~~~ls~~d~~~~~~~e 746 (782)
+|+++++|.|+....+++..=...+... -|.. ....... ..|.||| +.+++|++ .
T Consensus 70 ~V~~~~tN~~~~~~H~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~-~---------------- 129 (154)
T 2cal_A 70 TVDVTFINTNKGFGHSFDITKKGPPYAV---MPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP-T---------------- 129 (154)
T ss_dssp EEEEEEEECCTTCCCCCEEESCCSCCCS---SCCCCSEEEEBCCCCCCBTTBEEEEEEEECC-C----------------
T ss_pred EEEEEEEcCCCCeeeEEEEeecCcchhc---cccccccccccccccccCCCCceEEEEEEEE-C----------------
Confidence 5788999986544455544311111110 0100 0111111 1579999 66666665 3
Q ss_pred CeEEEEEEeC
Q 003980 747 IGLHTLIVGS 756 (782)
Q Consensus 747 ~G~y~i~vG~ 756 (782)
||+|.++...
T Consensus 130 pGtY~y~C~~ 139 (154)
T 2cal_A 130 AGTYYYVCQI 139 (154)
T ss_dssp SEEEEEECCS
T ss_pred CceEEEECCC
Confidence 6888887753
No 38
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=45.37 E-value=68 Score=28.85 Aligned_cols=27 Identities=19% Similarity=0.123 Sum_probs=21.8
Q ss_pred cccCCCCEEEEEEEeccCCCceEEeCCCCEEEeCeEEEEEEeC
Q 003980 714 VDVQKGKTKNVTVGFDVCQGLNLVDTDGQRKLVIGLHTLIVGS 756 (782)
Q Consensus 714 v~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~e~G~y~i~vG~ 756 (782)
+.|.||++.+++|+++. +|.|.++.+-
T Consensus 98 ~~l~pG~~~~~~~~~~~----------------~G~y~f~C~~ 124 (140)
T 1qhq_A 98 AMLNAGESGSVTFRTPA----------------PGTYLYICTF 124 (140)
T ss_dssp CCBCTTEEEEEEEECCS----------------SEEEEEECCS
T ss_pred eeeCCCceeEEEEEeCC----------------CeeEEEEeCC
Confidence 46899999999988863 6888888763
No 39
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=40.89 E-value=38 Score=28.66 Aligned_cols=26 Identities=42% Similarity=0.452 Sum_probs=20.2
Q ss_pred cccCCCCEEEEEEEeccCCCceEEeCCCCEEEeCeEEEEEEe
Q 003980 714 VDVQKGKTKNVTVGFDVCQGLNLVDTDGQRKLVIGLHTLIVG 755 (782)
Q Consensus 714 v~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~e~G~y~i~vG 755 (782)
..|.||++.+++|+.+ +||+|.++..
T Consensus 61 ~~~~pg~~~~~~~t~~----------------~~G~Y~y~C~ 86 (100)
T 4hci_A 61 VVVESGKEKNITVKPK----------------SAGTYELICR 86 (100)
T ss_dssp EEECTTCEEEEEECCC----------------SCEEEEEECT
T ss_pred eeecCCcceeEEEecc----------------cCceEEEECc
Confidence 4589999998888755 3789988763
No 40
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=40.11 E-value=75 Score=32.04 Aligned_cols=60 Identities=10% Similarity=-0.002 Sum_probs=39.1
Q ss_pred CceEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCCCcchhhhcccccccCCCCEEEEEEEecc
Q 003980 668 DLHFHVVIGVKNNGPMSGSHVVLIFWKPPSASTAGAPNVELVGFERVDVQKGKTKNVTVGFDV 730 (782)
Q Consensus 668 ~~~~~v~v~VtNtG~~~G~eVvQlY~~~~~~~~~~~p~k~L~gF~kv~L~pGes~~V~~~l~~ 730 (782)
++.+.+.++|-|..+..=+--|+|...+.... ...+.. .--+++.|+||++++|.|.+.+
T Consensus 95 GE~~~l~~~V~Ny~~~~~~v~V~l~~~~~~~~-~~~~~~--~~~~~v~v~a~~~~~v~f~i~p 154 (252)
T 3hrz_B 95 NEQVEIRAILHNYVNEDIYVRVELLYNPAFCS-ASTKGQ--RYRQQFPIKALSSRAVPFVIVP 154 (252)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEECCCTTEEE-SCCSSC--CEEEEEEECTTEEEEEEEEEEE
T ss_pred CCEEEEEEEEEcccCceEEEEEEEEcCCceEe-ecCCCC--ceEEEEEECCCCeEEEEEEEEe
Confidence 46899999999998766555555554432221 111110 0123467999999999999987
No 41
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=35.87 E-value=65 Score=31.84 Aligned_cols=49 Identities=10% Similarity=0.108 Sum_probs=34.8
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCCC-------CCCcchhhhcccccccCCCCEEEEEEEecc
Q 003980 672 HVVIGVKNNGPMSGSHVVLIFWKPPSAST-------AGAPNVELVGFERVDVQKGKTKNVTVGFDV 730 (782)
Q Consensus 672 ~v~v~VtNtG~~~G~eVvQlY~~~~~~~~-------~~~p~k~L~gF~kv~L~pGes~~V~~~l~~ 730 (782)
.++++|+|+|+.+ -.||..+.+..... +..|. ..|+||+.+.|.|....
T Consensus 29 ~~sl~l~N~~~~p--~LvQswv~~~~~~~~~~~pFivtPPl--------~Rl~p~~~q~lRI~~~~ 84 (218)
T 4ay0_A 29 GVMVSVKNTQDYP--VLIQSRIYDENKEKESEDPFVVTPPL--------FRLDAKQQNSLRIAQAG 84 (218)
T ss_dssp CEEEEEECCSSSC--EEEEEEEECTTSCCCSSCSEEEESSE--------EEECTTCEEEEEEEECS
T ss_pred EEEEEEEcCCCCC--EEEEEEEecCCCCccccCCEEECCCe--------EEeCCCCceEEEEEecC
Confidence 4789999999764 79999997643320 11222 35899999999997653
No 42
>4dzg_A PLIG; lysozyme inhibitor, G-type lysozyme binding, hydrolase inhib; HET: MLY; 2.02A {Aeromonas hydrophila subsp}
Probab=35.43 E-value=45 Score=29.42 Aligned_cols=43 Identities=23% Similarity=0.209 Sum_probs=23.3
Q ss_pred ccCCCCEEEEEEEeccCCCceEEeCC---------------CCE--EE-eCeEEEEEEeCC
Q 003980 715 DVQKGKTKNVTVGFDVCQGLNLVDTD---------------GQR--KL-VIGLHTLIVGSP 757 (782)
Q Consensus 715 ~L~pGes~~V~~~l~~~~~ls~~d~~---------------~~~--~~-e~G~y~i~vG~s 757 (782)
.+++||+-+|+++-...-.|.+++++ +.| ++ +.|+|+|.|...
T Consensus 35 ~a~aGQ~l~V~ls~~~~~~f~I~~P~~~~~~~l~~g~~~~~~~~~g~LP~sG~Y~i~V~~~ 95 (114)
T 4dzg_A 35 VAXAGQTMTVXIGGSSNANFNVFAPGAQPGQAEAIGRNDGDGQWQGALPASGXYLIQVYQM 95 (114)
T ss_dssp CC-CCCEEEC-CEESTTCEEEEECTTCCTTTSCCSEECCTTSCCEEECSSCC-CEEEEECC
T ss_pred EecCCCEEEEEeCCCCcEEEEEECCCCCcccceeccccCCcceEEEEecCCCcEEEEEEec
Confidence 34567776666633331123444432 268 45 589999999965
No 43
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=33.51 E-value=41 Score=29.00 Aligned_cols=27 Identities=22% Similarity=0.325 Sum_probs=20.7
Q ss_pred ccccCCCCEEEEEEEeccCCCceEEeCCCCEEEeCeEEEEEEe
Q 003980 713 RVDVQKGKTKNVTVGFDVCQGLNLVDTDGQRKLVIGLHTLIVG 755 (782)
Q Consensus 713 kv~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~e~G~y~i~vG 755 (782)
+..+.|||+.+++|+.+. ||.|.+...
T Consensus 70 ~~~i~pG~~~~~~f~~~~----------------~G~y~~~C~ 96 (112)
T 1iby_A 70 QEVIKAGETKTISFTADK----------------AGAFTIWCQ 96 (112)
T ss_dssp EEEECTTCEEEEEEECCS----------------CEEEEEBCS
T ss_pred eeEeCCCCEEEEEEECCC----------------CEEEEEECC
Confidence 567899999999997643 677777654
No 44
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=33.29 E-value=65 Score=31.87 Aligned_cols=48 Identities=13% Similarity=0.097 Sum_probs=34.2
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCCC-----CCCcchhhhcccccccCCCCEEEEEEEec
Q 003980 672 HVVIGVKNNGPMSGSHVVLIFWKPPSAST-----AGAPNVELVGFERVDVQKGKTKNVTVGFD 729 (782)
Q Consensus 672 ~v~v~VtNtG~~~G~eVvQlY~~~~~~~~-----~~~p~k~L~gF~kv~L~pGes~~V~~~l~ 729 (782)
.++++|+|+|+. --.||..+.+..... +..|. ..|+||+++.|.|...
T Consensus 29 ~~sl~l~N~~~~--p~LvQsWv~~~~~~~~~pfivtPPl--------~rl~p~~~q~lRI~~~ 81 (221)
T 2co7_B 29 GATLSVSNPQNY--PILVQSSVKAADKSSPAPFLVMPPL--------FRLEANQQSQLRIVRT 81 (221)
T ss_dssp CEEEEEECCSSS--CEEEEEEEEETTSSSBCSEEEESSE--------EEECTTCEEEEEEEEC
T ss_pred EEEEEEEcCCCC--cEEEEEEEecCCCCccCCEEEeCCE--------EEECCCCceEEEEEEC
Confidence 468899999975 679999998643320 11222 3589999999999654
No 45
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=32.39 E-value=73 Score=31.97 Aligned_cols=48 Identities=8% Similarity=0.029 Sum_probs=33.9
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCCC-----CCCcchhhhcccccccCCCCEEEEEEEec
Q 003980 672 HVVIGVKNNGPMSGSHVVLIFWKPPSAST-----AGAPNVELVGFERVDVQKGKTKNVTVGFD 729 (782)
Q Consensus 672 ~v~v~VtNtG~~~G~eVvQlY~~~~~~~~-----~~~p~k~L~gF~kv~L~pGes~~V~~~l~ 729 (782)
.++++|+|+|+. --.||..+.+..... +..|. ..|+||+.++|.|...
T Consensus 39 ~~sl~l~N~~~~--P~LvQsWv~~~~~~~~~pfivtPPl--------fRlep~~~q~lRIi~~ 91 (239)
T 4djm_A 39 GETLTVINDQDY--PMLVQSEVLSEDQKSPAPFVVTPPL--------FRLDGQQSSRLRIVRT 91 (239)
T ss_dssp CEEEEEEECSSS--CEEEEEEEECTTSSSBCSEEEESSE--------EEECTTEEEEEEEEEC
T ss_pred EEEEEEEeCCCC--cEEEEEEEEcCCCCccCCEEEcCCe--------EEECCCCceEEEEEEC
Confidence 368899999976 489999998643320 11222 3489999999999654
No 46
>4fxk_B Complement C4-A alpha chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_B*
Probab=31.71 E-value=36 Score=40.29 Aligned_cols=58 Identities=14% Similarity=-0.042 Sum_probs=42.9
Q ss_pred CceEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCCCcchhhhcccccccCCCCEEEEEEEecc
Q 003980 668 DLHFHVVIGVKNNGPMSGSHVVLIFWKPPSASTAGAPNVELVGFERVDVQKGKTKNVTVGFDV 730 (782)
Q Consensus 668 ~~~~~v~v~VtNtG~~~G~eVvQlY~~~~~~~~~~~p~k~L~gF~kv~L~pGes~~V~~~l~~ 730 (782)
++.+.+.++|.|..+...+-.|+|...++... ...+.. -+++.|+||++++|.|.|.+
T Consensus 167 GD~~~i~~~V~N~~~~~~~v~v~l~~~~~~~~-~~~~~~----~~~~~v~a~~~~~v~f~i~~ 224 (767)
T 4fxk_B 167 FEQLELRPVLYNYLDKNLTVSVHVSPVEGLCL-AGGGGL----AQQVLVPAGSARPVAFSVVP 224 (767)
T ss_dssp TCEEEECCEEEECSSSCEEEEEEECCCTTEEC-SSSSCC----CEEEEECSSCEEECCEEEEE
T ss_pred CCEEEEEEEEEECCCCCEEEEEEEEecCCeEE-ecCCce----eEEEEEcCCCeEEEEEEEEE
Confidence 57899999999999888888888876654332 111111 14567999999999999987
No 47
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=29.81 E-value=77 Score=33.85 Aligned_cols=58 Identities=12% Similarity=0.009 Sum_probs=34.7
Q ss_pred ceEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCCCcchhhhcc-cccccCCCCEEEEEEEeccC
Q 003980 669 LHFHVVIGVKNNGPMSGSHVVLIFWKPPSASTAGAPNVELVGF-ERVDVQKGKTKNVTVGFDVC 731 (782)
Q Consensus 669 ~~~~v~v~VtNtG~~~G~eVvQlY~~~~~~~~~~~p~k~L~gF-~kv~L~pGes~~V~~~l~~~ 731 (782)
...+-+++|+|||.+...--.+ ..+... ..+..-|.=. .+-.|.|||+..|++++...
T Consensus 46 ~~~~~~l~i~N~g~~pa~f~f~---~~~~~~--~~~~~wl~v~p~~g~l~Pge~~~i~l~~~v~ 104 (366)
T 3qis_A 46 QLQKEKFQISNNGQVPCHFSFI---PKLNDS--QYCKPWLRAEPFEGYLEPNETVDISLDVYVS 104 (366)
T ss_dssp CCEEEEEEEEECSSSCEEEEEE---CCTTCS--SSSCTTEEEESCEEEECTTCEEEEEEEECBC
T ss_pred CeEEEEEEEEecCCceEEEEEE---eCCCCC--CCCCCcEEEeCCccEECCCCEEEEEEEEEEC
Confidence 3577899999999887654331 222222 1110001000 23479999999999999873
No 48
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=28.60 E-value=85 Score=37.92 Aligned_cols=60 Identities=10% Similarity=-0.011 Sum_probs=41.8
Q ss_pred CceEEEEEEEEeCCC-CCcceEEEEEEeCCCCCCCCCcchhhhcccccccCCCCEEEEEEEecc
Q 003980 668 DLHFHVVIGVKNNGP-MSGSHVVLIFWKPPSASTAGAPNVELVGFERVDVQKGKTKNVTVGFDV 730 (782)
Q Consensus 668 ~~~~~v~v~VtNtG~-~~G~eVvQlY~~~~~~~~~~~p~k~L~gF~kv~L~pGes~~V~~~l~~ 730 (782)
++.+.+.++|.|..+ .+++--|+|....+... ...+. ...=+++.|+||++++|.|.|.+
T Consensus 94 GD~~~i~~~v~N~~~~~~~~v~v~l~~~~~~~~-~~~~~--~~~~~~v~l~~~~~~~v~f~i~~ 154 (915)
T 2hr0_B 94 NEQVEIRAVLYNYRQNQELKVRVELLHNPAFCS-LATTK--RRHQQTVTIPPKSSLSVPYVIVP 154 (915)
T ss_dssp TCCEEEEEEEEECCSSCCEEEEEEECCCTTEEC-SCCSS--SCEEEEEEECTTEEEEEEEEEEE
T ss_pred CcEEEEEEEEEcCCCCeeEEEEEEEecCCceEe-ecCCC--CcceeEEEECCCCeEEEEEEEEE
Confidence 568999999999988 88876777665443222 11110 01114678999999999999997
No 49
>3o0l_A Uncharacterized protein; PFAM DUF1425 family member, structural genomics, joint cente structural genomics, JCSG, protein structure initiative; HET: MSE; 1.81A {Shewanella loihica}
Probab=28.51 E-value=2.6e+02 Score=24.41 Aligned_cols=60 Identities=8% Similarity=0.023 Sum_probs=40.5
Q ss_pred CceEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCCCcchhhhcccccccCCCCEEEEEEEecc
Q 003980 668 DLHFHVVIGVKNNGPMSGSHVVLIFWKPPSASTAGAPNVELVGFERVDVQKGKTKNVTVGFDV 730 (782)
Q Consensus 668 ~~~~~v~v~VtNtG~~~G~eVvQlY~~~~~~~~~~~p~k~L~gF~kv~L~pGes~~V~~~l~~ 730 (782)
++..+++++|+|+.+.+=.=--.+|-=+...- ...|. ...++++.|.++|+.+|+..-+.
T Consensus 37 ~g~l~~~~~l~N~~~~~~~l~Yrf~WyD~~Gl-~v~~~--~~~W~~l~l~~~~~~~l~~vapn 96 (112)
T 3o0l_A 37 AGFLRARGTIISKSPKDQRLQYKFTWYDINGA-TVEDE--GVSWKSLKLHGKQQMQVTALSPN 96 (112)
T ss_dssp GGCEEEEEEEEECSSSCEEEEEEEEEECTTSC-BCCCT--TCCCEEEEECTTCEEEEEEECSS
T ss_pred CCeEEEEEEEEeCCCCCEEEEEEEEEECCCCC-CcCCC--CCCcEEEEECCCCeEEEEEECCC
Confidence 46789999999998765443334444444442 22222 24678899999999999887665
No 50
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=26.85 E-value=68 Score=31.50 Aligned_cols=54 Identities=13% Similarity=0.046 Sum_probs=32.1
Q ss_pred ceEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCCCcchhhhcccccccCCCCEEEEEEEeccCCCc
Q 003980 669 LHFHVVIGVKNNGPMSGSHVVLIFWKPPSASTAGAPNVELVGFERVDVQKGKTKNVTVGFDVCQGL 734 (782)
Q Consensus 669 ~~~~v~v~VtNtG~~~G~eVvQlY~~~~~~~~~~~p~k~L~gF~kv~L~pGes~~V~~~l~~~~~l 734 (782)
+..+.+++++|+|+.+=.=. ++-+ +++.. . . =.-..|+|||+..++|+++. ..+
T Consensus 19 ~~~~~~~~i~N~g~~pl~i~-~~~~-p~~~~-~-~-------~~~~~I~PG~~g~I~vt~~~-~~~ 72 (220)
T 2qsv_A 19 DEGVVRLVVNNTDESDLQVA-VVSL-PSFVS-L-D-------DRAFRLQAREPRELNLSLAV-PRN 72 (220)
T ss_dssp CCCEEEEEEEECSSSCEEEE-EEEC-CTTEE-C-S-------CCEEEECSSSCEEEEEEECC-CTT
T ss_pred CcceEEEEEEeCCCCceEEE-eccC-CCceE-e-e-------eCcceeCCCCceEEEEEEcc-hhc
Confidence 34567899999998654321 1111 11111 0 0 01245899999999999997 443
No 51
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=26.28 E-value=73 Score=31.27 Aligned_cols=52 Identities=13% Similarity=0.139 Sum_probs=34.6
Q ss_pred ceEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCCCcchhhhcccccccCCCCEEEEEEEecc
Q 003980 669 LHFHVVIGVKNNGPMSGSHVVLIFWKPPSASTAGAPNVELVGFERVDVQKGKTKNVTVGFDV 730 (782)
Q Consensus 669 ~~~~v~v~VtNtG~~~G~eVvQlY~~~~~~~~~~~p~k~L~gF~kv~L~pGes~~V~~~l~~ 730 (782)
...+.+++++|+|+.+-. ++--..... -..| .+.|-.|+|||+.+|+++++.
T Consensus 134 ~~~~~~f~i~N~G~~pL~----I~~v~~scg-ct~~-----~~~~~~i~PGe~~~i~v~~~~ 185 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPLR----LHSVTTRNP-ALTA-----VPDRTEIKPGGSTLLRIAVDP 185 (220)
T ss_dssp SCEEEEEEEEECSSSCEE----EEEEEECST-TEEE-----EESCSEECTTCEEEEEEEECH
T ss_pred CeEEEEEEEEECCCCCEE----EEEEEeCCC-CEee-----ecCCccCCCCCEEEEEEEEec
Confidence 467889999999876532 211111111 1122 266778999999999999998
No 52
>3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A*
Probab=24.60 E-value=56 Score=37.51 Aligned_cols=59 Identities=5% Similarity=-0.044 Sum_probs=40.0
Q ss_pred CceEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCCCcchhhhcccccccCCCCEEEE---EEEeccCCCc
Q 003980 668 DLHFHVVIGVKNNGPMSGSHVVLIFWKPPSASTAGAPNVELVGFERVDVQKGKTKNV---TVGFDVCQGL 734 (782)
Q Consensus 668 ~~~~~v~v~VtNtG~~~G~eVvQlY~~~~~~~~~~~p~k~L~gF~kv~L~pGes~~V---~~~l~~~~~l 734 (782)
++.++++|+++|+......-.|.+=+...... |.... ..+.|.+||+.++ +++++. +||
T Consensus 21 Ge~V~l~~~l~n~t~~~~~gtv~~~v~hl~~~-V~~~~------~~~~l~~G~s~~~~~~~~~~P~-~df 82 (643)
T 3vmn_A 21 GEAVHLNLTLNNTTSLAQNITATAEVYSLENK-LKTLQ------YTKYLLPNESYTTQKGEFVIPA-NSL 82 (643)
T ss_dssp TSCEEEECEEECCSSSCEEEEEEEEEEETTEE-EEEEE------EEEEECTTCEEECCTTSEEECT-TSS
T ss_pred CCeEEEEEEEecccCccceeEEEEEEEecccc-cccce------EEEEecCCCcceeeeeeeecCc-ccc
Confidence 36799999999988776655555554444332 22211 1257899999888 788887 677
No 53
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=23.43 E-value=14 Score=38.44 Aligned_cols=57 Identities=18% Similarity=0.403 Sum_probs=33.1
Q ss_pred HhhcCCeEEEEEccCCcccccCCCCCCCCCChh--HHHHHHHHHHhcCCcEEEEEecCCeeeec
Q 003980 478 AAAAADVVVVVVGLDQSIEAEGLDRENLTLPGY--QEKLVMEVANATKGTVILVVMAAGPVDIS 539 (782)
Q Consensus 478 ~a~~aD~vIv~vG~~~~~~~Eg~Dr~~l~Lp~~--q~~Li~~va~~~~~pvVvVl~~g~P~~l~ 539 (782)
..+++|+||++.|... ..|.+|.+|--... -+++++++++..++-+| ++.+||++..
T Consensus 66 ~~~~aDvVvitAG~pr---kpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aiv--lvvsNPvd~~ 124 (294)
T 2x0j_A 66 LLKGSEIIVVTAGLAR---KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKI--LVVTNPMDVM 124 (294)
T ss_dssp GGTTCSEEEECCCCCC---CSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEE--EECSSSHHHH
T ss_pred HhCCCCEEEEecCCCC---CCCCchHHHHHHHHHHHHHHHHHHHhcCCceEE--EEecCcchhh
Confidence 4678999999988643 34555644311000 13466667665555443 3346899863
No 54
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=22.91 E-value=71 Score=38.27 Aligned_cols=53 Identities=17% Similarity=0.127 Sum_probs=32.3
Q ss_pred EEEEEEEEeCCCCCcceEEEEEEeCCCCC---CCCCcchhhhcc-------cccccCCCCEEEEEEE
Q 003980 671 FHVVIGVKNNGPMSGSHVVLIFWKPPSAS---TAGAPNVELVGF-------ERVDVQKGKTKNVTVG 727 (782)
Q Consensus 671 ~~v~v~VtNtG~~~G~eVvQlY~~~~~~~---~~~~p~k~L~gF-------~kv~L~pGes~~V~~~ 727 (782)
=.++++|+|||+++ +|+=-+..--. .+..-...=.|| .-|..+|||+|+|++.
T Consensus 151 ~~~~~~v~~~~~r~----~~v~sh~hf~e~n~~l~fdr~~~~g~rl~~~~g~~~rf~pg~~~~v~l~ 213 (840)
T 4gy7_A 151 KAVILKVTSKGDRP----IQVGSHYHFIEVNPYLTFDRRKAYGMRLNIAAGTAVRFEPGDCKSVTLV 213 (840)
T ss_dssp EEEEEEEEECCSSC----EEEETTSCGGGSCTTEEBCHHHHTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred ceEEEEEEeCCCCc----eEeccccchhhcCcccccchhhhccccccccCCCceeeCCCCeeEEEEE
Confidence 46899999999887 67744432211 022222222222 2356799999999984
No 55
>1klf_A FIMC chaperone, chaperone protein FIMC; adhesin-chaperone complex, mannose-bound, chaperone/adhesin complex complex; HET: MAN; 2.79A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1 PDB: 1kiu_A* 3rfz_C 1qun_A 1bf8_A 1ze3_C 3bwu_C 3jwn_C
Probab=21.87 E-value=1.1e+02 Score=29.84 Aligned_cols=48 Identities=13% Similarity=0.159 Sum_probs=33.4
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCCC-----CCCcchhhhcccccccCCCCEEEEEEEe
Q 003980 672 HVVIGVKNNGPMSGSHVVLIFWKPPSAST-----AGAPNVELVGFERVDVQKGKTKNVTVGF 728 (782)
Q Consensus 672 ~v~v~VtNtG~~~G~eVvQlY~~~~~~~~-----~~~p~k~L~gF~kv~L~pGes~~V~~~l 728 (782)
.++++|+|+|+. ---.||..+.+..... +..|. ..|+||+++.|.|..
T Consensus 17 ~~sl~l~N~~~~-~p~LvQsWi~~~~~~~~~pfivtPPl--------~rl~p~~~q~lRI~~ 69 (205)
T 1klf_A 17 QVQLAVTNNDEN-STYLIQSWVENADGVKDGRFIVTPPL--------FAMKGKKENTLRILD 69 (205)
T ss_dssp EEEEEEEECCSS-CCEEEEEEEEETTSCCCSSEEEESSE--------EEECSSEEEEEEEEE
T ss_pred EEEEEEEcCCCC-CcEEEEEEEecCCCCccCCEEEcCCe--------EEECCCCceEEEEEe
Confidence 578999999832 1469999998643320 11222 358999999999976
No 56
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=21.26 E-value=1.9e+02 Score=29.18 Aligned_cols=54 Identities=13% Similarity=0.146 Sum_probs=35.2
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCCCCCCcchhhhccc---c-cccCCCCEEEEEEEec
Q 003980 672 HVVIGVKNNGPMSGSHVVLIFWKPPSASTAGAPNVELVGFE---R-VDVQKGKTKNVTVGFD 729 (782)
Q Consensus 672 ~v~v~VtNtG~~~G~eVvQlY~~~~~~~~~~~p~k~L~gF~---k-v~L~pGes~~V~~~l~ 729 (782)
.++++|+|+|+. --.||..+.+.... ..|...=.-|- - ..|+||++++|.|...
T Consensus 45 ~~sl~l~N~~~~--P~LvQsWid~~~~~--~~p~~~~~pfivtPPl~rl~pg~~q~lRI~~~ 102 (257)
T 3q48_A 45 EVTLRVSNTSGT--PVLAQAWIDDGRQD--VPPEELQVPFSVTPAVTRVEPNGGAVLRIAYL 102 (257)
T ss_dssp EEEEEEEECSSS--CEEEEEEEESSCCS--SCGGGGCCSEEEESSEEEECTTEEEEEEEEEC
T ss_pred EEEEEEEeCCCC--eEEEEEEEEcCCCc--cCcccccCCEEEcCCEEEECCCCceEEEEEEC
Confidence 478999999986 68999999874432 11211101121 1 2489999999999543
No 57
>3gfu_C Chaperone protein FAEE; immunoglobulin like fold, chaperone, fimbrium, immunoglobulin domain, periplasm, plasmid, cell adhesion; 1.99A {Escherichia coli} PDB: 3gew_B 3f65_A 3f6i_A 3f6l_A
Probab=20.93 E-value=1.6e+02 Score=29.16 Aligned_cols=49 Identities=10% Similarity=0.044 Sum_probs=32.6
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCCC------CCCcchhhhcccccccCCCCEEEEEEEec
Q 003980 672 HVVIGVKNNGPMSGSHVVLIFWKPPSAST------AGAPNVELVGFERVDVQKGKTKNVTVGFD 729 (782)
Q Consensus 672 ~v~v~VtNtG~~~G~eVvQlY~~~~~~~~------~~~p~k~L~gF~kv~L~pGes~~V~~~l~ 729 (782)
.++++|+|+|+.. --.||..+.+..... +..|. ..|+||+.+.|.|-..
T Consensus 17 ~~sl~l~N~~~~~-p~LvQsWid~~~~~~~~~pfivtPPl--------fRlep~~~q~lRIi~~ 71 (224)
T 3gfu_C 17 ALTITVTNNDKER-TFGGQAWVDNIVEKDTRPTFVVTPSF--------FKVKPNGQQTLRIIMA 71 (224)
T ss_dssp CEEEEEEECCSSC-CEEEEEEEEESSCCSCSCSEEEESSE--------EEECTTCEEEEEEEEC
T ss_pred eEEEEEEeCCCCc-cEEEEEEEecCCCCcccCCEEEcCCe--------EEECCCCceEEEEEEC
Confidence 3688999998642 357999998632210 11222 3489999999999543
No 58
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=20.83 E-value=80 Score=36.68 Aligned_cols=60 Identities=17% Similarity=0.076 Sum_probs=42.4
Q ss_pred ceEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCCCcchhhhcc--cccccCCCCEEEEEEEecc
Q 003980 669 LHFHVVIGVKNNGPMSGSHVVLIFWKPPSASTAGAPNVELVGF--ERVDVQKGKTKNVTVGFDV 730 (782)
Q Consensus 669 ~~~~v~v~VtNtG~~~G~eVvQlY~~~~~~~~~~~p~k~L~gF--~kv~L~pGes~~V~~~l~~ 730 (782)
..+.|+++++|..+.. ..|+++++...-.....+..++... ..+.|+|+|+++|.+.|..
T Consensus 487 ~df~v~v~~~N~s~~~--~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~~l~p~~~~~v~~~i~y 548 (687)
T 2q3z_A 487 SDFDVFAHITNNTAEE--YVCRLLLCARTVSYNGILGPECGTKYLLNLTLEPFSEKSVPLCILY 548 (687)
T ss_dssp CCEEEEEEEEECSSSC--EEEEEEEEEEEECTTCCEEEEEEEEEEEEEEECTTEEEEEEEEECH
T ss_pred CCEEEEEEEEECCCCC--EEEEEEEEEEEEeeCCcccceEeeeeeeEEEECCCceEEEEEEECH
Confidence 4699999999998765 5788887763222124455555122 2457999999999999986
No 59
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=20.56 E-value=1.2e+02 Score=35.12 Aligned_cols=60 Identities=17% Similarity=0.123 Sum_probs=39.8
Q ss_pred ceEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCCCcchhhhc-ccccccCCCCEEEEEEEecc
Q 003980 669 LHFHVVIGVKNNGPMSGSHVVLIFWKPPSASTAGAPNVELVG-FERVDVQKGKTKNVTVGFDV 730 (782)
Q Consensus 669 ~~~~v~v~VtNtG~~~G~eVvQlY~~~~~~~~~~~p~k~L~g-F~kv~L~pGes~~V~~~l~~ 730 (782)
..+.|+++|+|..+.. ..|+++++...-.....+..+++- =..+.|+|+|++++.+.|..
T Consensus 486 ~df~v~v~~~N~s~~~--~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~L~p~~~~~v~~~i~y 546 (695)
T 1g0d_A 486 TDFDVIVEVKNEGGRD--AHAQLTMLAMAVTYNSLRRGECQRKTISVTVPAHKAHKEVMRLHY 546 (695)
T ss_dssp CCEEEEEEEEECSSSC--EEEEEEEEEEEECTTCBCCCCCCEEEEEEEECTTEEEEEEEEECH
T ss_pred CCEEEEEEEEECCCCC--EEEEEEEEEEEEeeCCcccCceeEeeEEEEECCCceEEEEEEECH
Confidence 4699999999988766 567777766322111222222211 12567999999999999986
No 60
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=20.24 E-value=39 Score=35.68 Aligned_cols=57 Identities=32% Similarity=0.394 Sum_probs=28.5
Q ss_pred HhhcCCeEEEEEccCCcccccCCCCCCCCCC--hhHHHHHHHHHHhcCCcEEEEEecCCeeeec
Q 003980 478 AAAAADVVVVVVGLDQSIEAEGLDRENLTLP--GYQEKLVMEVANATKGTVILVVMAAGPVDIS 539 (782)
Q Consensus 478 ~a~~aD~vIv~vG~~~~~~~Eg~Dr~~l~Lp--~~q~~Li~~va~~~~~pvVvVl~~g~P~~l~ 539 (782)
..+++|+||++.|... .+|.+|.+|--- .--.++++++.+.+++ .++ ++.+||+++.
T Consensus 73 a~~~aDiVvi~ag~~~---kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~-a~i-lvvtNPvdi~ 131 (326)
T 3vku_A 73 DAKDADLVVITAGAPQ---KPGETRLDLVNKNLKILKSIVDPIVDSGFN-GIF-LVAANPVDIL 131 (326)
T ss_dssp GGTTCSEEEECCCCC-------------------CHHHHHHHHHTTTCC-SEE-EECSSSHHHH
T ss_pred HhcCCCEEEECCCCCC---CCCchHHHHHHHHHHHHHHHHHHHHhcCCc-eEE-EEccCchHHH
Confidence 4788999999988642 345566554211 1135666777665554 333 3446899873
No 61
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=20.09 E-value=1.5e+02 Score=28.33 Aligned_cols=55 Identities=11% Similarity=0.083 Sum_probs=37.6
Q ss_pred cchHHHHHHhhcCCeEEEEEccCCcccccCCCCCCCCCChhHHHHHHHHHH---------------hcCCcEEEEEecCC
Q 003980 470 SLIEPAAKAAAAADVVVVVVGLDQSIEAEGLDRENLTLPGYQEKLVMEVAN---------------ATKGTVILVVMAAG 534 (782)
Q Consensus 470 ~~~~~a~~~a~~aD~vIv~vG~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~va~---------------~~~~pvVvVl~~g~ 534 (782)
..+.+..+..+.||.+|++.= . -....|+.-+.+|+.+.. ..+|+++++..+|+
T Consensus 62 ~~~~~~~~~l~~AD~iV~~~P--~---------y~~~~pa~LK~~iD~v~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~ 130 (196)
T 3lcm_A 62 AEMEKYRDLVTWADHLIFIFP--I---------WWSGMPAILKGFIDRVFVADFAYSYKKVGLEGHLQGKSAWIITTHNT 130 (196)
T ss_dssp GGGHHHHHHHHHCSEEEEEEE--C---------BTTBCCHHHHHHHHHHSCBTTTEEECSSSEEESCTTCEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCEEEEECc--h---------hhccccHHHHHHHHHHccCCcceecCCCCcccCCCCCEEEEEEcCCC
Confidence 345667788899998877642 1 135578877888888742 13577777777777
Q ss_pred e
Q 003980 535 P 535 (782)
Q Consensus 535 P 535 (782)
|
T Consensus 131 ~ 131 (196)
T 3lcm_A 131 P 131 (196)
T ss_dssp C
T ss_pred c
Confidence 7
Done!