BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003982
(782 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 103/189 (54%), Gaps = 2/189 (1%)
Query: 571 ISIEVLRQVTDNFSEANILXXXXXXXXXXXELPDGTKIAVKRMESNTMGNKGLSEFQAEI 630
S+ L+ +DNFS NIL L DGT +AVKR++ G +FQ E+
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERX-QGGELQFQTEV 86
Query: 631 AVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIA 690
+++ HR+L+ L G+C+ +ERLLVY YM G++A L E PL W +R IA
Sbjct: 87 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE-RPESQPPLDWPKRQRIA 145
Query: 691 LDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAG 750
L ARG+ YLH IHRD+K +NIL+ ++ A V DFGL K V + G
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRG 205
Query: 751 TFGYLAPEY 759
T G++APEY
Sbjct: 206 TIGHIAPEY 214
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 102/190 (53%), Gaps = 4/190 (2%)
Query: 571 ISIEVLRQVTDNFSEANILXXXXXXXXXXXELPDGTKIAVKRM-ESNTMGNKGLSEFQAE 629
S+ L+ +DNF NIL L DG +AVKR+ E T G G +FQ E
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQG--GELQFQTE 77
Query: 630 IAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTI 689
+ +++ HR+L+ L G+C+ +ERLLVY YM G++A L E PL W +R I
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE-RPESQPPLDWPKRQRI 136
Query: 690 ALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLA 749
AL ARG+ YLH IHRD+K +NIL+ ++ A V DFGL K V +
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 196
Query: 750 GTFGYLAPEY 759
G G++APEY
Sbjct: 197 GXIGHIAPEY 206
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 107/185 (57%), Gaps = 7/185 (3%)
Query: 576 LRQVTDNFSEANILXXXXXXXXXXXELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTK 635
L + T+NF ++ L DG K+A+KR + ++G+ EF+ EI L+
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES--SQGIEEFETEIETLSF 91
Query: 636 VRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVAR 695
RH HLV+L+G+C +E +L+Y+YM G L +HL+ D ++W+QR+ I + AR
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY-GSDLPTMSMSWEQRLEICIGAAR 150
Query: 696 GVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD-GKYSVETRLAGTFGY 754
G+ YLH+ ++ IHRD+K NIL+ ++ K+ DFG+ K + G+ + + GT GY
Sbjct: 151 GLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGY 207
Query: 755 LAPEY 759
+ PEY
Sbjct: 208 IDPEY 212
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 106/185 (57%), Gaps = 7/185 (3%)
Query: 576 LRQVTDNFSEANILXXXXXXXXXXXELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTK 635
L + T+NF ++ L DG K+A+KR + ++G+ EF+ EI L+
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES--SQGIEEFETEIETLSF 91
Query: 636 VRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVAR 695
RH HLV+L+G+C +E +L+Y+YM G L +HL+ D ++W+QR+ I + AR
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY-GSDLPTMSMSWEQRLEICIGAAR 150
Query: 696 GVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD-GKYSVETRLAGTFGY 754
G+ YLH+ ++ IHRD+K NIL+ ++ K+ DFG+ K + + + + GT GY
Sbjct: 151 GLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
Query: 755 LAPEY 759
+ PEY
Sbjct: 208 IDPEY 212
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 88/156 (56%), Gaps = 8/156 (5%)
Query: 606 TKIAVKRMES--NTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663
T +AVK++ + + + +F EI V+ K +H +LV LLG+ +G + LVY YMP
Sbjct: 55 TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPN 114
Query: 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
G+L L G PL+W R IA A G+ +LH + IHRD+K +NIL+ +
Sbjct: 115 GSLLDRLSCL--DGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEA 169
Query: 724 MRAKVADFGLVKNAPDGKYSV-ETRLAGTFGYLAPE 758
AK++DFGL + + +V +R+ GT Y+APE
Sbjct: 170 FTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE 205
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 87/156 (55%), Gaps = 8/156 (5%)
Query: 606 TKIAVKRMES--NTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663
T +AVK++ + + + +F EI V+ K +H +LV LLG+ +G + LVY YMP
Sbjct: 55 TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPN 114
Query: 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
G+L L G PL+W R IA A G+ +LH + IHRD+K +NIL+ +
Sbjct: 115 GSLLDRLSCL--DGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEA 169
Query: 724 MRAKVADFGLVKNAPDGKYSV-ETRLAGTFGYLAPE 758
AK++DFGL + + +V R+ GT Y+APE
Sbjct: 170 FTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE 205
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 87/156 (55%), Gaps = 8/156 (5%)
Query: 606 TKIAVKRMES--NTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663
T +AVK++ + + + +F EI V+ K +H +LV LLG+ +G + LVY YMP
Sbjct: 49 TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPN 108
Query: 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
G+L L G PL+W R IA A G+ +LH + IHRD+K +NIL+ +
Sbjct: 109 GSLLDRLSCL--DGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEA 163
Query: 724 MRAKVADFGLVKNAPD-GKYSVETRLAGTFGYLAPE 758
AK++DFGL + + + + R+ GT Y+APE
Sbjct: 164 FTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE 199
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 84/156 (53%), Gaps = 8/156 (5%)
Query: 606 TKIAVKRMES--NTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663
T +AVK++ + + + +F EI V K +H +LV LLG+ +G + LVY Y P
Sbjct: 46 TTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPN 105
Query: 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
G+L L G PL+W R IA A G+ +LH + IHRD+K +NIL+ +
Sbjct: 106 GSLLDRLSCL--DGTPPLSWHXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEA 160
Query: 724 MRAKVADFGLVKNAPDGKYSV-ETRLAGTFGYLAPE 758
AK++DFGL + + V +R+ GT Y APE
Sbjct: 161 FTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE 196
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 165/398 (41%), Gaps = 47/398 (11%)
Query: 92 LETLSFQMNNIAGAIP-SLAN-ATSLQDIYLDNNNFTS--VPTGCFDGLTNLQVLSLSDN 147
L+ L N +G +P SL N + SL + L +NNF+ +P C + LQ L L +N
Sbjct: 342 LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNN 401
Query: 148 PNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASF 207
P L+ + L +L++ + G IP S S L++L+L N G +P
Sbjct: 402 GFTGK--IPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL 459
Query: 208 AKSDIQNLWMNDQQLGLSGTLDV-LSGMTQLRQVWLHKNQFTGPIPD-LSKCESLFDLSL 265
+ D L+G + LS T L + L N+ TG IP + + E+L L L
Sbjct: 460 MYVKTLETLILDFN-DLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKL 518
Query: 266 RDNQLTGVVPASVISLPALLNISLQNNKLQGPYPL------------FPSKVQKVSLDHN 313
+N +G +PA + +L+ + L N G P F + + V + ++
Sbjct: 519 SNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKND 578
Query: 314 NFCKNSSDAGKPCDPQVTTLLQI----------AGDMGYPAILSDSWEGN---------- 353
K AG + Q Q+ Y S +++ N
Sbjct: 579 GMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSY 638
Query: 354 NACDGW-PFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLT 412
N G+ P S + +NL + ++G+I +L L L L N L G IP ++
Sbjct: 639 NMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMS 698
Query: 413 KLASLQNLDVSNNNLSGKVPDFGS-----NVKFTVSPG 445
L L +D+SNNNLSG +P+ G KF +PG
Sbjct: 699 ALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPG 736
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 172/412 (41%), Gaps = 64/412 (15%)
Query: 33 LKLAQSLQNLPSDWSSTSSTGYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQL 92
LKL SL+ L +S S W + D + ++++ + +SG + ++S L
Sbjct: 145 LKL-NSLEVLDLSANSISGANVVGW--VLSDGCGELKHLAISGNKISGDV--DVSRCVNL 199
Query: 93 ETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAP 152
E L NN + IP L + ++LQ + + N + + T L++L++S N + P
Sbjct: 200 EFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGP 259
Query: 153 WPFPNELTKSTSLTTLYMDNANIFGLIPDFFD-SFSNLQNLRLSYNNFTGSLPASFAKSD 211
P P L SL L + G IPDF + L L LS N+F G++P F
Sbjct: 260 IP-PLPLK---SLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSC- 314
Query: 212 IQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIP--DLSKCESLFDLSLRDNQ 269
+ L + L N F+G +P L K L L L N+
Sbjct: 315 -----------------------SLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNE 351
Query: 270 LTGVVPASVISLPA-LLNISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDP 328
+G +P S+ +L A LL + L +N GP + P N C+N P +
Sbjct: 352 FSGELPESLTNLSASLLTLDLSSNNFSGP--ILP-----------NLCQN------PKNT 392
Query: 329 QVTTLLQIAGDMG-YPAILSDSWE-------GNNACDGWPFVTCSQGRIITINLANKLLA 380
LQ G G P LS+ E N P S ++ + L +L
Sbjct: 393 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 452
Query: 381 GNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVP 432
G I + +L+ L L N+LTG IP GL+ +L + +SNN L+G++P
Sbjct: 453 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 504
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 184/429 (42%), Gaps = 58/429 (13%)
Query: 40 QNLPSDWSSTSSTGYCEWTGINCDNSNRVTTISLAKSGLSGTLSP--EISSLTQLETLSF 97
+NL DWSS + C + G+ C + ++VT+I L+ L+ S F
Sbjct: 24 KNLLPDWSSNKNP--CTFDGVTCRD-DKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLF 80
Query: 98 QMN-NIAGAIPSLANATSLQDIYLDNNNFTSVPTG--CFDGLTNLQVLSLSDNPNLAPWP 154
N +I G++ + SL + L N+ + T + L+ L++S N
Sbjct: 81 LSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNT----LD 136
Query: 155 FPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSD--- 211
FP +++ L +L + L LS N+ +G+ + SD
Sbjct: 137 FPGKVSGGLKLNSLEV---------------------LDLSANSISGANVVGWVLSDGCG 175
Query: 212 -IQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQL 270
+++L ++ ++ SG +DV S L + + N F+ IP L C +L L + N+L
Sbjct: 176 ELKHLAISGNKI--SGDVDV-SRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKL 232
Query: 271 TGVVPASVISLPALLNISLQNNKLQGPYPLFPSK-VQKVSLDHNNFCKNSSD-AGKPCDP 328
+G ++ + L +++ +N+ GP P P K +Q +SL N F D CD
Sbjct: 233 SGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACD- 291
Query: 329 QVTTLLQIAGDMGYPAI----------LSDSWEGNNACDGWPFVTCSQGR-IITINLANK 377
T L ++G+ Y A+ S + NN P T + R + ++L+
Sbjct: 292 -TLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFN 350
Query: 378 LLAGNISPAYANLT-SLKNLYLQQNNLTGPIPDGLTK--LASLQNLDVSNNNLSGKVPDF 434
+G + + NL+ SL L L NN +GPI L + +LQ L + NN +GK+P
Sbjct: 351 EFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPT 410
Query: 435 GSNVKFTVS 443
SN VS
Sbjct: 411 LSNCSELVS 419
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 150/374 (40%), Gaps = 68/374 (18%)
Query: 62 CDN-SNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPS-LANATSLQDIY 119
C N N + + L +G +G + P +S+ ++L +L N ++G IPS L + + L+D+
Sbjct: 386 CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLK 445
Query: 120 LDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLI 179
L N + L+ L L N P+ L+ T+L + + N + G I
Sbjct: 446 LWLNMLEGEIPQELMYVKTLETLILDFND--LTGEIPSGLSNCTNLNWISLSNNRLTGEI 503
Query: 180 PDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQ 239
P + NL L+LS N+F+G++PA
Sbjct: 504 PKWIGRLENLAILKLSNNSFSGNIPA---------------------------------- 529
Query: 240 VWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYP 299
+L C SL L L N G +PA++ Q+ K+
Sbjct: 530 -------------ELGDCRSLIWLDLNTNLFNGTIPAAMFK---------QSGKIAAN-- 565
Query: 300 LFPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAG-DMGYPAILSDSWEGNNACDG 358
F + + V + ++ K AG + Q Q+ P ++ G +
Sbjct: 566 -FIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPT 624
Query: 359 WPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQ 418
+ + G ++ ++++ +L+G I ++ L L L N+++G IPD + L L
Sbjct: 625 FD----NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLN 680
Query: 419 NLDVSNNNLSGKVP 432
LD+S+N L G++P
Sbjct: 681 ILDLSSNKLDGRIP 694
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 353 NNACDGWPFV-TCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGL 411
NN G PF+ CS + + I+ NKL +G+ S A + T LK L + N GPIP
Sbjct: 207 NNFSTGIPFLGDCSALQHLDIS-GNKL-SGDFSRAISTCTELKLLNISSNQFVGPIPP-- 262
Query: 412 TKLASLQNLDVSNNNLSGKVPDFGSNVKFTVS----PGNPFIGT 451
L SLQ L ++ N +G++PDF S T++ GN F G
Sbjct: 263 LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGA 306
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 56/150 (37%), Gaps = 31/150 (20%)
Query: 183 FDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWL 242
FD+ ++ L +SYN +G +P M L + L
Sbjct: 625 FDNNGSMMFLDMSYNMLSGYIPKEIGS------------------------MPYLFILNL 660
Query: 243 HKNQFTGPIPD-LSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLF 301
N +G IPD + L L L N+L G +P ++ +L L I L NN L GP
Sbjct: 661 GHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGP---I 717
Query: 302 PSKVQKVSLDHNNFCKNSSDAGKP---CDP 328
P Q + F N G P CDP
Sbjct: 718 PEMGQFETFPPAKFLNNPGLCGYPLPRCDP 747
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 63 DNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLD 121
DN+ + + ++ + LSG + EI S+ L L+ N+I+G+IP + + L + L
Sbjct: 626 DNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLS 685
Query: 122 NNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWP 154
+N LT L + LS+N P P
Sbjct: 686 SNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G+ +AVK + + ++EF E+A++ ++RH ++V +G +V EY+ RG
Sbjct: 60 GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119
Query: 665 TLAQHLFEWHDHG-YTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
+L + L H G L ++R+++A DVA+G+ YLH+ +HRDLK N+L+
Sbjct: 120 SLYRLL---HKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPIVHRDLKSPNLLVDKK 175
Query: 724 MRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
KV DFGL + + AGT ++APE
Sbjct: 176 YTVKVCDFGLSR-LKASXFLXSKXAAGTPEWMAPE 209
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 165/398 (41%), Gaps = 47/398 (11%)
Query: 92 LETLSFQMNNIAGAIP-SLAN-ATSLQDIYLDNNNFTS--VPTGCFDGLTNLQVLSLSDN 147
L+ L N +G +P SL N + SL + L +NNF+ +P C + LQ L L +N
Sbjct: 345 LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNN 404
Query: 148 PNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASF 207
P L+ + L +L++ + G IP S S L++L+L N G +P
Sbjct: 405 GFTGK--IPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL 462
Query: 208 AKSDIQNLWMNDQQLGLSGTLDV-LSGMTQLRQVWLHKNQFTGPIPD-LSKCESLFDLSL 265
+ D L+G + LS T L + L N+ TG IP + + E+L L L
Sbjct: 463 MYVKTLETLILDFN-DLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKL 521
Query: 266 RDNQLTGVVPASVISLPALLNISLQNNKLQGPYPL------------FPSKVQKVSLDHN 313
+N +G +PA + +L+ + L N G P F + + V + ++
Sbjct: 522 SNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKND 581
Query: 314 NFCKNSSDAGKPCDPQVTTLLQI----------AGDMGYPAILSDSWEGN---------- 353
K AG + Q Q+ Y S +++ N
Sbjct: 582 GMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSY 641
Query: 354 NACDGW-PFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLT 412
N G+ P S + +NL + ++G+I +L L L L N L G IP ++
Sbjct: 642 NMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMS 701
Query: 413 KLASLQNLDVSNNNLSGKVPDFGS-----NVKFTVSPG 445
L L +D+SNNNLSG +P+ G KF +PG
Sbjct: 702 ALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPG 739
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 166/407 (40%), Gaps = 54/407 (13%)
Query: 33 LKLAQSLQNLPSDWSSTSSTGYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQL 92
LKL SL+ L +S S W + D + ++++ + +SG + ++S L
Sbjct: 148 LKL-NSLEVLDLSANSISGANVVGW--VLSDGCGELKHLAISGNKISGDV--DVSRCVNL 202
Query: 93 ETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAP 152
E L NN + IP L + ++LQ + + N + + T L++L++S N + P
Sbjct: 203 EFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGP 262
Query: 153 WPFPNELTKSTSLTTLYMDNANIFGLIPDFFD-SFSNLQNLRLSYNNFTGSLPASFAKSD 211
P P L SL L + G IPDF + L L LS N+F G++P F
Sbjct: 263 IP-PLPLK---SLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCS 318
Query: 212 IQNLWMNDQQLGLSGTL--DVLSGMTQLRQVWLHKNQFTGPIPD--LSKCESLFDLSLRD 267
+ SG L D L M L+ + L N+F+G +P+ + SL L L
Sbjct: 319 LLESLALSSN-NFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSS 377
Query: 268 NQLTGVVPASVISLP--ALLNISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKP 325
N +G + ++ P L + LQNN G P S ++ H +F
Sbjct: 378 NNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSF---------- 427
Query: 326 CDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISP 385
N P S ++ + L +L G I
Sbjct: 428 ---------------------------NYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 460
Query: 386 AYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVP 432
+ +L+ L L N+LTG IP GL+ +L + +SNN L+G++P
Sbjct: 461 ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 507
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 184/429 (42%), Gaps = 58/429 (13%)
Query: 40 QNLPSDWSSTSSTGYCEWTGINCDNSNRVTTISLAKSGLSGTLSP--EISSLTQLETLSF 97
+NL DWSS + C + G+ C + ++VT+I L+ L+ S F
Sbjct: 27 KNLLPDWSSNKNP--CTFDGVTCRD-DKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLF 83
Query: 98 QMN-NIAGAIPSLANATSLQDIYLDNNNFTSVPTG--CFDGLTNLQVLSLSDNPNLAPWP 154
N +I G++ + SL + L N+ + T + L+ L++S N
Sbjct: 84 LSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNT----LD 139
Query: 155 FPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSD--- 211
FP +++ L +L + L LS N+ +G+ + SD
Sbjct: 140 FPGKVSGGLKLNSLEV---------------------LDLSANSISGANVVGWVLSDGCG 178
Query: 212 -IQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQL 270
+++L ++ ++ SG +DV S L + + N F+ IP L C +L L + N+L
Sbjct: 179 ELKHLAISGNKI--SGDVDV-SRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKL 235
Query: 271 TGVVPASVISLPALLNISLQNNKLQGPYPLFPSK-VQKVSLDHNNFCKNSSD-AGKPCDP 328
+G ++ + L +++ +N+ GP P P K +Q +SL N F D CD
Sbjct: 236 SGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACD- 294
Query: 329 QVTTLLQIAGDMGYPAI----------LSDSWEGNNACDGWPFVTCSQGR-IITINLANK 377
T L ++G+ Y A+ S + NN P T + R + ++L+
Sbjct: 295 -TLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFN 353
Query: 378 LLAGNISPAYANLT-SLKNLYLQQNNLTGPIPDGLTK--LASLQNLDVSNNNLSGKVPDF 434
+G + + NL+ SL L L NN +GPI L + +LQ L + NN +GK+P
Sbjct: 354 EFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPT 413
Query: 435 GSNVKFTVS 443
SN VS
Sbjct: 414 LSNCSELVS 422
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 150/374 (40%), Gaps = 68/374 (18%)
Query: 62 CDN-SNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPS-LANATSLQDIY 119
C N N + + L +G +G + P +S+ ++L +L N ++G IPS L + + L+D+
Sbjct: 389 CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLK 448
Query: 120 LDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLI 179
L N + L+ L L N P+ L+ T+L + + N + G I
Sbjct: 449 LWLNMLEGEIPQELMYVKTLETLILDFND--LTGEIPSGLSNCTNLNWISLSNNRLTGEI 506
Query: 180 PDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQ 239
P + NL L+LS N+F+G++PA
Sbjct: 507 PKWIGRLENLAILKLSNNSFSGNIPA---------------------------------- 532
Query: 240 VWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYP 299
+L C SL L L N G +PA++ Q+ K+
Sbjct: 533 -------------ELGDCRSLIWLDLNTNLFNGTIPAAMFK---------QSGKIAAN-- 568
Query: 300 LFPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAG-DMGYPAILSDSWEGNNACDG 358
F + + V + ++ K AG + Q Q+ P ++ G +
Sbjct: 569 -FIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPT 627
Query: 359 WPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQ 418
+ + G ++ ++++ +L+G I ++ L L L N+++G IPD + L L
Sbjct: 628 FD----NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLN 683
Query: 419 NLDVSNNNLSGKVP 432
LD+S+N L G++P
Sbjct: 684 ILDLSSNKLDGRIP 697
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 353 NNACDGWPFV-TCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGL 411
NN G PF+ CS + + I+ NKL +G+ S A + T LK L + N GPIP
Sbjct: 210 NNFSTGIPFLGDCSALQHLDIS-GNKL-SGDFSRAISTCTELKLLNISSNQFVGPIPP-- 265
Query: 412 TKLASLQNLDVSNNNLSGKVPDFGSNVKFTVS----PGNPFIGT 451
L SLQ L ++ N +G++PDF S T++ GN F G
Sbjct: 266 LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGA 309
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 60/151 (39%), Gaps = 31/151 (20%)
Query: 183 FDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWL 242
FD+ ++ L +SYN +G +P +++G M L + L
Sbjct: 628 FDNNGSMMFLDMSYNMLSGYIP---------------KEIG---------SMPYLFILNL 663
Query: 243 HKNQFTGPIPD-LSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLF 301
N +G IPD + L L L N+L G +P ++ +L L I L NN L GP
Sbjct: 664 GHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGP---I 720
Query: 302 PSKVQKVSLDHNNFCKNSSDAGKP---CDPQ 329
P Q + F N G P CDP
Sbjct: 721 PEMGQFETFPPAKFLNNPGLCGYPLPRCDPS 751
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 63 DNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLD 121
DN+ + + ++ + LSG + EI S+ L L+ N+I+G+IP + + L + L
Sbjct: 629 DNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLS 688
Query: 122 NNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWP 154
+N LT L + LS+N P P
Sbjct: 689 SNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 88/176 (50%), Gaps = 14/176 (7%)
Query: 566 GGNVAISIEVLRQ-VTDNFSEANILXXXXXXXXXXXELPD--GTKIAVKRMESNTMGNKG 622
GG+VA E R N E +L L D G K+AVK ++++
Sbjct: 2 GGSVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQA- 60
Query: 623 LSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRGTLAQHLFEWHDHGYTPL 681
F AE +V+T++RH +LV LLG + L +V EYM +G+L +L G + L
Sbjct: 61 ---FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVL 114
Query: 682 TWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737
+ +LDV +EYL +F+HRDL N+L+ +D AKV+DFGL K A
Sbjct: 115 GGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 167
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G+ +AVK + + ++EF E+A++ ++RH ++V +G +V EY+ RG
Sbjct: 60 GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119
Query: 665 TLAQHLFEWHDHG-YTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
+L + L H G L ++R+++A DVA+G+ YLH+ +HR+LK N+L+
Sbjct: 120 SLYRLL---HKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPIVHRNLKSPNLLVDKK 175
Query: 724 MRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
KV DFGL + S ++ AGT ++APE
Sbjct: 176 YTVKVCDFGLSRLKASTFLSSKS-AAGTPEWMAPE 209
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 9/151 (5%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ +TM + EF E AV+ +++H +LV LLG C +V EYMP G L
Sbjct: 60 VAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLL 116
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E + T + + +A ++ +EYL +++FIHRDL N L+G++ K
Sbjct: 117 DYLRECNREEVTAVV---LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVK 170
Query: 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
VADFGL + Y+ + APE
Sbjct: 171 VADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 201
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 17/151 (11%)
Query: 603 PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
P+ KI V + +F E +LT ++H H+V G C+ G ++V+EYM
Sbjct: 39 PEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMK 98
Query: 663 RGTLAQHLFEWHDHG-----------YTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHR 711
G L + L HG T LT Q + IA +A G+ Y LA Q F+HR
Sbjct: 99 HGDLNKFL---RAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVY---LASQHFVHR 152
Query: 712 DLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
DL N L+G+++ K+ DFG+ ++ Y
Sbjct: 153 DLATRNCLVGENLLVKIGDFGMSRDVYSTDY 183
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 75/134 (55%), Gaps = 11/134 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPR 663
G K+AVK ++++ F AE +V+T++RH +LV LLG + L +V EYM +
Sbjct: 35 GNKVAVKCIKNDATAQA----FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK 90
Query: 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
G+L +L G + L + +LDV +EYL +F+HRDL N+L+ +D
Sbjct: 91 GSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSED 144
Query: 724 MRAKVADFGLVKNA 737
AKV+DFGL K A
Sbjct: 145 NVAKVSDFGLTKEA 158
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 23/156 (14%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGT 665
T +AVK ++ + ++FQ E A++ + + ++V LLG C G L++EYM G
Sbjct: 78 TMVAVKMLKEEASADMQ-ADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGD 136
Query: 666 LAQHLFEWHDH-------------------GYTPLTWKQRVTIALDVARGVEYLHSLAQQ 706
L + L H G PL+ +++ IA VA G+ YL +++
Sbjct: 137 LNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL---SER 193
Query: 707 SFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
F+HRDL N L+G++M K+ADFGL +N Y
Sbjct: 194 KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY 229
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 75/134 (55%), Gaps = 11/134 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPR 663
G K+AVK ++++ F AE +V+T++RH +LV LLG + L +V EYM +
Sbjct: 29 GNKVAVKCIKNDATAQA----FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK 84
Query: 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
G+L +L G + L + +LDV +EYL +F+HRDL N+L+ +D
Sbjct: 85 GSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSED 138
Query: 724 MRAKVADFGLVKNA 737
AKV+DFGL K A
Sbjct: 139 NVAKVSDFGLTKEA 152
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 604 DGT--KIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER-----LL 656
DGT K+AVK M+ + + + EF +E A + H +++ LLG CI S + ++
Sbjct: 59 DGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMV 118
Query: 657 VYEYMPRGTLAQHL-FEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ +M G L +L + + G + + + +D+A G+EYL + ++F+HRDL
Sbjct: 119 ILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLAA 175
Query: 716 SNILIGDDMRAKVADFGLVKNAPDGKYSVETRLA 749
N ++ DDM VADFGL K G Y + R+A
Sbjct: 176 RNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIA 209
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 75/134 (55%), Gaps = 11/134 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPR 663
G K+AVK ++++ F AE +V+T++RH +LV LLG + L +V EYM +
Sbjct: 216 GNKVAVKCIKNDATAQA----FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK 271
Query: 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
G+L +L G + L + +LDV +EYL +F+HRDL N+L+ +D
Sbjct: 272 GSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSED 325
Query: 724 MRAKVADFGLVKNA 737
AKV+DFGL K A
Sbjct: 326 NVAKVSDFGLTKEA 339
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 84/158 (53%), Gaps = 16/158 (10%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
T++A+K ++ TM + F E V+ K+RH LV L Y + E + +V EYM +G
Sbjct: 292 TRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKG 346
Query: 665 TLAQHLFEWHDHGYTP--LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
+L L G T L Q V +A +A G+ Y+ + +++HRDL+ +NIL+G+
Sbjct: 347 SLLDFL-----KGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGE 398
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYA 760
++ KVADFGL + D +Y+ + APE A
Sbjct: 399 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 436
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 82/153 (53%), Gaps = 11/153 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK + + L F+ E+ VL K RH +++ +GY + +V ++ +L
Sbjct: 37 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 95
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
HL T K+ + IA ARG++YLH+ +S IHRDLK +NI + +D K
Sbjct: 96 HHLHA----SETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVK 148
Query: 728 VADFGL--VKNAPDGKYSVETRLAGTFGYLAPE 758
+ DFGL VK+ G + E +L+G+ ++APE
Sbjct: 149 IGDFGLATVKSRWSGSHQFE-QLSGSILWMAPE 180
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 84/158 (53%), Gaps = 16/158 (10%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
T++A+K ++ TM + F E V+ K+RH LV L Y + E + +V EYM +G
Sbjct: 209 TRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKG 263
Query: 665 TLAQHLFEWHDHGYTP--LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
+L L G T L Q V +A +A G+ Y+ + +++HRDL+ +NIL+G+
Sbjct: 264 SLLDFL-----KGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGE 315
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYA 760
++ KVADFGL + D +Y+ + APE A
Sbjct: 316 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 353
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 84/158 (53%), Gaps = 16/158 (10%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
T++A+K ++ TM + F E V+ K+RH LV L Y + E + +V EYM +G
Sbjct: 209 TRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKG 263
Query: 665 TLAQHLFEWHDHGYTP--LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
+L L G T L Q V +A +A G+ Y+ + +++HRDL+ +NIL+G+
Sbjct: 264 SLLDFL-----KGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGE 315
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYA 760
++ KVADFGL + D +Y+ + APE A
Sbjct: 316 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 353
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 82/156 (52%), Gaps = 12/156 (7%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
T++A+K ++ TM + F E V+ K+RH LV L Y + E + +V EYM +G
Sbjct: 43 TRVAIKTLKPGTMSPEA---FLQEAQVMKKIRHEKLVQL--YAVVSEEPIYIVTEYMSKG 97
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+L L L Q V +A +A G+ Y+ + +++HRDL+ +NIL+G+++
Sbjct: 98 SLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENL 151
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYA 760
KVADFGL + D +Y+ + APE A
Sbjct: 152 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 84/158 (53%), Gaps = 16/158 (10%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
T++A+K ++ TM + F E V+ K+RH LV L Y + E + +V EYM +G
Sbjct: 36 TRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKG 90
Query: 665 TLAQHLFEWHDHGYTP--LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
+L L G T L Q V +A +A G+ Y+ + +++HRDL+ +NIL+G+
Sbjct: 91 SLLDFL-----KGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGE 142
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYA 760
++ KVADFGL + D +Y+ + APE A
Sbjct: 143 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 180
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 84/158 (53%), Gaps = 16/158 (10%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
T++A+K ++ TM + F E V+ K+RH LV L Y + E + +V EYM +G
Sbjct: 209 TRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVGEYMSKG 263
Query: 665 TLAQHLFEWHDHGYTP--LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
+L L G T L Q V +A +A G+ Y+ + +++HRDL+ +NIL+G+
Sbjct: 264 SLLDFL-----KGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGE 315
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYA 760
++ KVADFGL + D +Y+ + APE A
Sbjct: 316 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 353
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 82/156 (52%), Gaps = 12/156 (7%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
T++A+K ++ TM + F E V+ K+RH LV L Y + E + +V EYM +G
Sbjct: 43 TRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVIEYMSKG 97
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+L L L Q V +A +A G+ Y+ + +++HRDL+ +NIL+G+++
Sbjct: 98 SLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENL 151
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYA 760
KVADFGL + D +Y+ + APE A
Sbjct: 152 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 82/156 (52%), Gaps = 12/156 (7%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
T++A+K ++ TM + F E V+ K+RH LV L Y + E + +V EYM +G
Sbjct: 32 TRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKG 86
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+L L L Q V +A +A G+ Y+ + +++HRDL+ +NIL+G+++
Sbjct: 87 SLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENL 140
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYA 760
KVADFGL + D +Y+ + APE A
Sbjct: 141 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 176
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 90/168 (53%), Gaps = 21/168 (12%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPRG 664
TK+AVK ++S+ K LS+ +E+ ++ + +H++++ LLG C ++ EY +G
Sbjct: 102 TKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 160
Query: 665 TLAQHLFEWH----DHGYTP-------LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDL 713
L ++L ++ Y P L+ K V+ A VARG+EYL A + IHRDL
Sbjct: 161 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 217
Query: 714 KPSNILIGDDMRAKVADFGLVKNAPDGKYSVET---RLAGTFGYLAPE 758
N+L+ +D K+ADFGL ++ Y +T RL ++APE
Sbjct: 218 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP--VKWMAPE 263
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 82/156 (52%), Gaps = 12/156 (7%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
T++A+K ++ TM + F E V+ K+RH LV L Y + E + +V EYM +G
Sbjct: 43 TRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVCEYMSKG 97
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+L L L Q V +A +A G+ Y+ + +++HRDL+ +NIL+G+++
Sbjct: 98 SLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENL 151
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYA 760
KVADFGL + D +Y+ + APE A
Sbjct: 152 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 82/156 (52%), Gaps = 12/156 (7%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
T++A+K ++ TM + F E V+ K+RH LV L Y + E + +V EYM +G
Sbjct: 34 TRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKG 88
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+L L L Q V +A +A G+ Y+ + +++HRDL+ +NIL+G+++
Sbjct: 89 SLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENL 142
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYA 760
KVADFGL + D +Y+ + APE A
Sbjct: 143 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 178
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 90/168 (53%), Gaps = 21/168 (12%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPRG 664
TK+AVK ++S+ K LS+ +E+ ++ + +H++++ LLG C ++ EY +G
Sbjct: 61 TKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 119
Query: 665 TLAQHLFEWH----DHGYTP-------LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDL 713
L ++L ++ Y P L+ K V+ A VARG+EYL A + IHRDL
Sbjct: 120 NLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 176
Query: 714 KPSNILIGDDMRAKVADFGLVKNAPDGKYSVET---RLAGTFGYLAPE 758
N+L+ +D K+ADFGL ++ Y +T RL ++APE
Sbjct: 177 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP--VKWMAPE 222
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 82/156 (52%), Gaps = 12/156 (7%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
T++A+K ++ TM + F E V+ K+RH LV L Y + E + +V EYM +G
Sbjct: 43 TRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKG 97
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+L L L Q V +A +A G+ Y+ + +++HRDL+ +NIL+G+++
Sbjct: 98 SLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENL 151
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYA 760
KVADFGL + D +Y+ + APE A
Sbjct: 152 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 90/168 (53%), Gaps = 21/168 (12%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPRG 664
TK+AVK ++S+ K LS+ +E+ ++ + +H++++ LLG C ++ EY +G
Sbjct: 54 TKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 112
Query: 665 TLAQHLFEWH----DHGYTP-------LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDL 713
L ++L ++ Y P L+ K V+ A VARG+EYL A + IHRDL
Sbjct: 113 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 169
Query: 714 KPSNILIGDDMRAKVADFGLVKNAPDGKYSVET---RLAGTFGYLAPE 758
N+L+ +D K+ADFGL ++ Y +T RL ++APE
Sbjct: 170 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP--VKWMAPE 215
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 90/168 (53%), Gaps = 21/168 (12%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPRG 664
TK+AVK ++S+ K LS+ +E+ ++ + +H++++ LLG C ++ EY +G
Sbjct: 61 TKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 119
Query: 665 TLAQHLFEWH----DHGYTP-------LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDL 713
L ++L ++ Y P L+ K V+ A VARG+EYL A + IHRDL
Sbjct: 120 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 176
Query: 714 KPSNILIGDDMRAKVADFGLVKNAPDGKYSVET---RLAGTFGYLAPE 758
N+L+ +D K+ADFGL ++ Y +T RL ++APE
Sbjct: 177 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP--VKWMAPE 222
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 12/156 (7%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
T++A+K ++ TM + F E V+ K+RH LV L Y + E + +V EYM +G
Sbjct: 43 TRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVMEYMSKG 97
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
L L L Q V +A +A G+ Y+ + +++HRDL+ +NIL+G+++
Sbjct: 98 CLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENL 151
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYA 760
KVADFGL + D +Y+ + APE A
Sbjct: 152 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 90/168 (53%), Gaps = 21/168 (12%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPRG 664
TK+AVK ++S+ K LS+ +E+ ++ + +H++++ LLG C ++ EY +G
Sbjct: 50 TKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 108
Query: 665 TLAQHLFEWH----DHGYTP-------LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDL 713
L ++L ++ Y P L+ K V+ A VARG+EYL A + IHRDL
Sbjct: 109 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 165
Query: 714 KPSNILIGDDMRAKVADFGLVKNAPDGKYSVET---RLAGTFGYLAPE 758
N+L+ +D K+ADFGL ++ Y +T RL ++APE
Sbjct: 166 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP--VKWMAPE 211
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 90/168 (53%), Gaps = 21/168 (12%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPRG 664
TK+AVK ++S+ K LS+ +E+ ++ + +H++++ LLG C ++ EY +G
Sbjct: 53 TKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 111
Query: 665 TLAQHLFEWH----DHGYTP-------LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDL 713
L ++L ++ Y P L+ K V+ A VARG+EYL A + IHRDL
Sbjct: 112 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 168
Query: 714 KPSNILIGDDMRAKVADFGLVKNAPDGKYSVET---RLAGTFGYLAPE 758
N+L+ +D K+ADFGL ++ Y +T RL ++APE
Sbjct: 169 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP--VKWMAPE 214
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 13/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER--LLVYEYMP 662
G +AVK+++ +T + L +F+ EI +L ++H ++V G C + R L+ EY+P
Sbjct: 70 GEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 127
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G+L +L + H + Q + + +G+EYL + +IHRDL NIL+ +
Sbjct: 128 YGSLRDYL-QKHKERIDHIKLLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVEN 180
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAGT--FGYLAPE 758
+ R K+ DFGL K P K + + G + APE
Sbjct: 181 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 13/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER--LLVYEYMP 662
G +AVK+++ +T + L +F+ EI +L ++H ++V G C + R L+ EY+P
Sbjct: 44 GEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 101
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G+L +L + H + Q + + +G+EYL + +IHRDL NIL+ +
Sbjct: 102 YGSLRDYL-QKHKERIDHIKLLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVEN 154
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAGT--FGYLAPE 758
+ R K+ DFGL K P K + + G + APE
Sbjct: 155 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 192
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 13/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER--LLVYEYMP 662
G +AVK+++ +T + L +F+ EI +L ++H ++V G C + R L+ EY+P
Sbjct: 39 GEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 96
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G+L +L + H + Q + + +G+EYL + +IHRDL NIL+ +
Sbjct: 97 YGSLRDYL-QKHKERIDHIKLLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVEN 149
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAGT--FGYLAPE 758
+ R K+ DFGL K P K + + G + APE
Sbjct: 150 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 187
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 13/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER--LLVYEYMP 662
G +AVK+++ +T + L +F+ EI +L ++H ++V G C + R L+ EY+P
Sbjct: 46 GEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 103
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G+L +L + H + Q + + +G+EYL + +IHRDL NIL+ +
Sbjct: 104 YGSLRDYL-QKHKERIDHIKLLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVEN 156
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAGT--FGYLAPE 758
+ R K+ DFGL K P K + + G + APE
Sbjct: 157 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 194
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 13/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER--LLVYEYMP 662
G +AVK+++ +T + L +F+ EI +L ++H ++V G C + R L+ EY+P
Sbjct: 39 GEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 96
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G+L +L + H + Q + + +G+EYL + +IHRDL NIL+ +
Sbjct: 97 YGSLRDYL-QKHKERIDHIKLLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVEN 149
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAGT--FGYLAPE 758
+ R K+ DFGL K P K + + G + APE
Sbjct: 150 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 187
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 12/156 (7%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
T++A+K ++ TM + F E V+ K+RH LV L Y + E + +V EYM +G
Sbjct: 43 TRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKG 97
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
L L L Q V +A +A G+ Y+ + +++HRDL+ +NIL+G+++
Sbjct: 98 CLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENL 151
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYA 760
KVADFGL + D +Y+ + APE A
Sbjct: 152 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 13/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER--LLVYEYMP 662
G +AVK+++ +T + L +F+ EI +L ++H ++V G C + R L+ EY+P
Sbjct: 42 GEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 99
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G+L +L + H + Q + + +G+EYL + +IHRDL NIL+ +
Sbjct: 100 YGSLRDYL-QKHKERIDHIKLLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVEN 152
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAGT--FGYLAPE 758
+ R K+ DFGL K P K + + G + APE
Sbjct: 153 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 190
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER--LLVYEYMP 662
G +AVK+++ +T + L +F+ EI +L ++H ++V G C + R L+ EY+P
Sbjct: 38 GEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 95
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G+L +L + H + Q + + +G+EYL + +IHRDL NIL+ +
Sbjct: 96 YGSLRDYL-QKHKERIDHIKLLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVEN 148
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAGT---FGYLAPE 758
+ R K+ DFGL K P K + + G F Y APE
Sbjct: 149 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE 186
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 13/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER--LLVYEYMP 662
G +AVK+++ +T + L +F+ EI +L ++H ++V G C + R L+ EY+P
Sbjct: 37 GEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 94
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G+L +L + H + Q + + +G+EYL + +IHRDL NIL+ +
Sbjct: 95 YGSLRDYL-QKHKERIDHIKLLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVEN 147
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAGT--FGYLAPE 758
+ R K+ DFGL K P K + + G + APE
Sbjct: 148 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 185
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 13/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER--LLVYEYMP 662
G +AVK+++ +T + L +F+ EI +L ++H ++V G C + R L+ EY+P
Sbjct: 57 GEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 114
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G+L +L + H + Q + + +G+EYL + +IHRDL NIL+ +
Sbjct: 115 YGSLRDYL-QKHKERIDHIKLLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVEN 167
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAGT--FGYLAPE 758
+ R K+ DFGL K P K + + G + APE
Sbjct: 168 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 205
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 13/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER--LLVYEYMP 662
G +AVK+++ +T + L +F+ EI +L ++H ++V G C + R L+ EY+P
Sbjct: 43 GEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 100
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G+L +L + H + Q + + +G+EYL + +IHRDL NIL+ +
Sbjct: 101 YGSLRDYL-QKHKERIDHIKLLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVEN 153
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAGT--FGYLAPE 758
+ R K+ DFGL K P K + + G + APE
Sbjct: 154 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 191
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 13/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER--LLVYEYMP 662
G +AVK+++ +T + L +F+ EI +L ++H ++V G C + R L+ EY+P
Sbjct: 45 GEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 102
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G+L +L + H + Q + + +G+EYL + +IHRDL NIL+ +
Sbjct: 103 YGSLRDYL-QKHKERIDHIKLLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVEN 155
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAGT--FGYLAPE 758
+ R K+ DFGL K P K + + G + APE
Sbjct: 156 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 193
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 81/153 (52%), Gaps = 11/153 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK + + L F+ E+ VL K RH +++ +GY + +V ++ +L
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLY 107
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
HL T K+ + IA ARG++YLH+ +S IHRDLK +NI + +D K
Sbjct: 108 HHLHA----SETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVK 160
Query: 728 VADFGLV--KNAPDGKYSVETRLAGTFGYLAPE 758
+ DFGL K+ G + E +L+G+ ++APE
Sbjct: 161 IGDFGLATEKSRWSGSHQFE-QLSGSILWMAPE 192
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 81/153 (52%), Gaps = 11/153 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK + + L F+ E+ VL K RH +++ +GY + +V ++ +L
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 107
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
HL T K+ + IA ARG++YLH+ +S IHRDLK +NI + +D K
Sbjct: 108 HHLHA----SETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVK 160
Query: 728 VADFGLV--KNAPDGKYSVETRLAGTFGYLAPE 758
+ DFGL K+ G + E +L+G+ ++APE
Sbjct: 161 IGDFGLATEKSRWSGSHQFE-QLSGSILWMAPE 192
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 13/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER--LLVYEYMP 662
G +AVK+++ +T + L +F+ EI +L ++H ++V G C + R L+ EY+P
Sbjct: 57 GEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 114
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G+L +L + H + Q + + +G+EYL + +IHRDL NIL+ +
Sbjct: 115 YGSLRDYL-QKHKERIDHIKLLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVEN 167
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAGT--FGYLAPE 758
+ R K+ DFGL K P K + + G + APE
Sbjct: 168 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 205
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 90/168 (53%), Gaps = 21/168 (12%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPRG 664
TK+AVK ++S+ K LS+ +E+ ++ + +H++++ LLG C ++ EY +G
Sbjct: 46 TKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 104
Query: 665 TLAQHLFEWH----DHGYTP-------LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDL 713
L ++L ++ Y P L+ K V+ A VARG+EYL A + IHRDL
Sbjct: 105 NLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 161
Query: 714 KPSNILIGDDMRAKVADFGLVKNAPDGKYSVET---RLAGTFGYLAPE 758
N+L+ +D K+ADFGL ++ Y +T RL ++APE
Sbjct: 162 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP--VKWMAPE 207
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 11/155 (7%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K M+ NT+G+ L + EI L +RH+H+ L ++ +V EY P G
Sbjct: 35 GEMVAIKIMDKNTLGS-DLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGG 93
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
L ++ L+ ++ + + V Y+HS Q + HRDLKP N+L +
Sbjct: 94 ELFDYII-----SQDRLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYH 145
Query: 725 RAKVADFGLVKNAPDGK-YSVETRLAGTFGYLAPE 758
+ K+ DFGL K Y ++T G+ Y APE
Sbjct: 146 KLKLIDFGLCAKPKGNKDYHLQT-CCGSLAYAAPE 179
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 90/168 (53%), Gaps = 21/168 (12%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPRG 664
TK+AVK ++S+ K LS+ +E+ ++ + +H++++ LLG C ++ EY +G
Sbjct: 61 TKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 119
Query: 665 TLAQHLFEWH----DHGYTP-------LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDL 713
L ++L ++ Y P L+ K V+ A VARG+EYL A + IHRDL
Sbjct: 120 NLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 176
Query: 714 KPSNILIGDDMRAKVADFGLVKNAPDGKYSVET---RLAGTFGYLAPE 758
N+L+ +D K+ADFGL ++ Y +T RL ++APE
Sbjct: 177 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP--VKWMAPE 222
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 13/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER--LLVYEYMP 662
G +AVK+++ +T + L +F+ EI +L ++H ++V G C + R L+ EY+P
Sbjct: 39 GEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 96
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G+L +L + H + Q + + +G+EYL + +IHRDL NIL+ +
Sbjct: 97 YGSLRDYL-QKHKERIDHIKLLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVEN 149
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAGT--FGYLAPE 758
+ R K+ DFGL K P K + + G + APE
Sbjct: 150 ENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPE 187
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 78/146 (53%), Gaps = 18/146 (12%)
Query: 604 DGTKI--AVKRMESNTMGNKGLSEFQAEIAVLTKVRHR-HLVALLGYCINGSERLLVYEY 660
DG ++ A+KRM+ + +F E+ VL K+ H +++ LLG C + L EY
Sbjct: 49 DGLRMDAAIKRMKEYASKDDH-RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEY 107
Query: 661 MPRGTLAQHL-----------FEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFI 709
P G L L F + + L+ +Q + A DVARG++YL +Q+ FI
Sbjct: 108 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFI 164
Query: 710 HRDLKPSNILIGDDMRAKVADFGLVK 735
HRDL NIL+G++ AK+ADFGL +
Sbjct: 165 HRDLAARNILVGENYVAKIADFGLSR 190
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER--LLVYEYMP 662
G +AVK+++ +T + L +F+ EI +L ++H ++V G C + R L+ E++P
Sbjct: 42 GEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLP 99
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G+L ++L + H + Q + + +G+EYL + +IHRDL NIL+ +
Sbjct: 100 YGSLREYL-QKHKERIDHIKLLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVEN 152
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAGT--FGYLAPE 758
+ R K+ DFGL K P K + + G + APE
Sbjct: 153 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 190
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 78/146 (53%), Gaps = 18/146 (12%)
Query: 604 DGTKI--AVKRMESNTMGNKGLSEFQAEIAVLTKVRHR-HLVALLGYCINGSERLLVYEY 660
DG ++ A+KRM+ + +F E+ VL K+ H +++ LLG C + L EY
Sbjct: 39 DGLRMDAAIKRMKEYASKDDH-RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEY 97
Query: 661 MPRGTLAQHL-----------FEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFI 709
P G L L F + + L+ +Q + A DVARG++YL +Q+ FI
Sbjct: 98 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFI 154
Query: 710 HRDLKPSNILIGDDMRAKVADFGLVK 735
HRDL NIL+G++ AK+ADFGL +
Sbjct: 155 HRDLAARNILVGENYVAKIADFGLSR 180
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 13/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER--LLVYEYMP 662
G +AVK+++ +T + L +F+ EI +L ++H ++V G C + R L+ EY+P
Sbjct: 42 GEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 99
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G+L +L + H + Q + + +G+EYL + +IHRDL NIL+ +
Sbjct: 100 YGSLRDYL-QAHAERIDHIKLLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVEN 152
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAGT--FGYLAPE 758
+ R K+ DFGL K P K + + G + APE
Sbjct: 153 ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 190
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 12/156 (7%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
T++A+K ++ TM + F E V+ K+RH LV L Y + E + +V EYM +G
Sbjct: 43 TRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKG 97
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+L L L Q V +A +A G+ Y+ + +++HRDL +NIL+G+++
Sbjct: 98 SLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLAAANILVGENL 151
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYA 760
KVADFGL + D +Y+ + APE A
Sbjct: 152 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 84/158 (53%), Gaps = 16/158 (10%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
T++A+K ++ TM + F E V+ K+RH LV L Y + E + +V EYM +G
Sbjct: 40 TRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMNKG 94
Query: 665 TLAQHLFEWHDHGYTP--LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
+L L G T L Q V ++ +A G+ Y+ + +++HRDL+ +NIL+G+
Sbjct: 95 SLLDFL-----KGETGKYLRLPQLVDMSAQIASGMAYVERM---NYVHRDLRAANILVGE 146
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYA 760
++ KVADFGL + D +Y+ + APE A
Sbjct: 147 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 184
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 81/159 (50%), Gaps = 16/159 (10%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER--LLVYEYMP 662
G +AVK ++++ G + S ++ EI +L + H H++ G C + E+ LV EY+P
Sbjct: 43 GEMVAVKALKADC-GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP 101
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G+L +L H G Q + A + G+ YLHS Q +IHR+L N+L+ +
Sbjct: 102 LGSLRDYLPR-HSIGLA-----QLLLFAQQICEGMAYLHS---QHYIHRNLAARNVLLDN 152
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAG---TFGYLAPE 758
D K+ DFGL K P+G R G F Y APE
Sbjct: 153 DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APE 190
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 68/145 (46%), Gaps = 13/145 (8%)
Query: 602 LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYM 661
LP+ K+ V +FQ E +LT ++H+H+V G C G L+V+EYM
Sbjct: 66 LPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYM 125
Query: 662 PRGTL----------AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHR 711
G L A+ L D PL Q + +A VA G+ YL L F+HR
Sbjct: 126 RHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHR 182
Query: 712 DLKPSNILIGDDMRAKVADFGLVKN 736
DL N L+G + K+ DFG+ ++
Sbjct: 183 DLATRNCLVGQGLVVKIGDFGMSRD 207
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 82/159 (51%), Gaps = 16/159 (10%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN-GSERL-LVYEYMP 662
G +AVK ++++ G + S ++ EI +L + H H++ G C + G+ L LV EY+P
Sbjct: 60 GEMVAVKALKADA-GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVP 118
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G+L +L H G Q + A + G+ YLH+ Q +IHRDL N+L+ +
Sbjct: 119 LGSLRDYLPR-HSIGLA-----QLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDN 169
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAG---TFGYLAPE 758
D K+ DFGL K P+G R G F Y APE
Sbjct: 170 DRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APE 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ +TM + EF E AV+ +++H +LV LLG C ++ E+M G L
Sbjct: 41 VAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 97
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E + + + + +A ++ +EYL +++FIHRDL N L+G++ K
Sbjct: 98 DYLRECNRQEVSAVV---LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVK 151
Query: 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
VADFGL + Y+ + APE
Sbjct: 152 VADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ +TM + EF E AV+ +++H +LV LLG C ++ E+M G L
Sbjct: 41 VAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 97
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E + + + + +A ++ +EYL +++FIHRDL N L+G++ K
Sbjct: 98 DYLRECNRQEVSAVV---LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVK 151
Query: 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
VADFGL + Y+ + APE
Sbjct: 152 VADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ +TM + EF E AV+ +++H +LV LLG C ++ E+M G L
Sbjct: 46 VAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E + + + + +A ++ +EYL +++FIHRDL N L+G++ K
Sbjct: 103 DYLRECNRQEVSAVV---LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVK 156
Query: 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
VADFGL + Y+ + APE
Sbjct: 157 VADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 187
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 16/158 (10%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
T++A+K ++ TM + F E V+ K+RH LV L Y + E + +V EYM +G
Sbjct: 33 TRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL--YAVVSEEPIXIVTEYMSKG 87
Query: 665 TLAQHLFEWHDHGYTP--LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
+L L G T L Q V +A +A G+ Y+ + +++HRDL+ +NIL+G+
Sbjct: 88 SLLDFL-----KGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGE 139
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYA 760
++ KVADFGL + D + + + APE A
Sbjct: 140 NLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAA 177
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 12/156 (7%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
T++A+K ++ GN F E V+ K+RH LV L Y + E + +V EYM +G
Sbjct: 210 TRVAIKTLKP---GNMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKG 264
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+L L L Q V +A +A G+ Y+ + +++HRDL+ +NIL+G+++
Sbjct: 265 SLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENL 318
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYA 760
KVADFGL + D +Y+ + APE A
Sbjct: 319 VCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAA 354
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ +TM + EF E AV+ +++H +LV LLG C ++ E+M G L
Sbjct: 41 VAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E + + + + +A ++ +EYL +++FIHRDL N L+G++ K
Sbjct: 98 DYLRECNRQEVSAVV---LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVK 151
Query: 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
VADFGL + Y+ + APE
Sbjct: 152 VADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 13/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER--LLVYEYMP 662
G +AVK+++ +T + L +F+ EI +L ++H ++V G C + R L+ EY+P
Sbjct: 40 GEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 97
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G+L +L + H + Q + + +G+EYL + +IHR+L NIL+ +
Sbjct: 98 YGSLRDYL-QKHKERIDHIKLLQYTS---QICKGMEYL---GTKRYIHRNLATRNILVEN 150
Query: 723 DMRAKVADFGLVKNAPDGK--YSVETRLAGTFGYLAPE 758
+ R K+ DFGL K P K Y V+ + APE
Sbjct: 151 ENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPE 188
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ +TM + EF E AV+ +++H +LV LLG C ++ E+M G L
Sbjct: 41 VAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E + + + + +A ++ +EYL +++FIHRDL N L+G++ K
Sbjct: 98 DYLRECNRQEVSAVV---LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVK 151
Query: 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
VADFGL + Y+ + APE
Sbjct: 152 VADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 14/168 (8%)
Query: 602 LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYM 661
LP+ K+ V +FQ E +LT ++H+H+V G C G L+V+EYM
Sbjct: 37 LPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYM 96
Query: 662 PRGTL----------AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHR 711
G L A+ L D PL Q + +A VA G+ YL L F+HR
Sbjct: 97 RHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHR 153
Query: 712 DLKPSNILIGDDMRAKVADFGLVKNA-PDGKYSVETRLAGTFGYLAPE 758
DL N L+G + K+ DFG+ ++ Y V R ++ PE
Sbjct: 154 DLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPE 201
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 11/153 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK + + L F+ E+ VL K RH +++ +GY + +V ++ +L
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLY 91
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
HL T + + IA A+G++YLH+ +S IHRDLK +NI + +D+ K
Sbjct: 92 HHLHIIE----TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVK 144
Query: 728 VADFGL--VKNAPDGKYSVETRLAGTFGYLAPE 758
+ DFGL VK+ G + E +L+G+ ++APE
Sbjct: 145 IGDFGLATVKSRWSGSHQFE-QLSGSILWMAPE 176
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 14/168 (8%)
Query: 602 LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYM 661
LP+ K+ V +FQ E +LT ++H+H+V G C G L+V+EYM
Sbjct: 43 LPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYM 102
Query: 662 PRGTL----------AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHR 711
G L A+ L D PL Q + +A VA G+ YL L F+HR
Sbjct: 103 RHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHR 159
Query: 712 DLKPSNILIGDDMRAKVADFGLVKNA-PDGKYSVETRLAGTFGYLAPE 758
DL N L+G + K+ DFG+ ++ Y V R ++ PE
Sbjct: 160 DLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPE 207
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 81/159 (50%), Gaps = 16/159 (10%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER--LLVYEYMP 662
G +AVK ++++ G + S ++ EI +L + H H++ G C + E+ LV EY+P
Sbjct: 43 GEMVAVKALKADC-GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP 101
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G+L +L H G Q + A + G+ YLH+ Q +IHR+L N+L+ +
Sbjct: 102 LGSLRDYLPR-HSIGLA-----QLLLFAQQICEGMAYLHA---QHYIHRNLAARNVLLDN 152
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAG---TFGYLAPE 758
D K+ DFGL K P+G R G F Y APE
Sbjct: 153 DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APE 190
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY PRG +
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEV 100
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 101 YKEL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 152
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + T L GT YL PE
Sbjct: 153 KIADFGWSVHAPSSR---RTTLCGTLDYLPPE 181
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ +TM + EF E AV+ +++H +LV LLG C ++ E+M G L
Sbjct: 46 VAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 102
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E + + + +A ++ +EYL +++FIHRDL N L+G++ K
Sbjct: 103 DYLRECNRQEVNAVV---LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVK 156
Query: 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
VADFGL + Y+ + APE
Sbjct: 157 VADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 187
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 79/143 (55%), Gaps = 16/143 (11%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPRG 664
TK+AVK ++S+ K LS+ +E+ ++ + +H++++ LLG C ++ EY +G
Sbjct: 61 TKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 119
Query: 665 TLAQHLFEWHDHG----YTP-------LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDL 713
L ++L G + P L+ K V+ A VARG+EYL A + IHRDL
Sbjct: 120 NLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 176
Query: 714 KPSNILIGDDMRAKVADFGLVKN 736
N+L+ +D K+ADFGL ++
Sbjct: 177 AARNVLVTEDNVMKIADFGLARD 199
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 11/153 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK + + L F+ E+ VL K RH +++ +GY + +V ++ +L
Sbjct: 38 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 96
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
HL T + + IA A+G++YLH+ +S IHRDLK +NI + +D+ K
Sbjct: 97 HHLHIIE----TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVK 149
Query: 728 VADFGL--VKNAPDGKYSVETRLAGTFGYLAPE 758
+ DFGL VK+ G + E +L+G+ ++APE
Sbjct: 150 IGDFGLATVKSRWSGSHQFE-QLSGSILWMAPE 181
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ +TM + EF E AV+ +++H +LV LLG C ++ E+M G L
Sbjct: 46 VAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E + + + +A ++ +EYL +++FIHRDL N L+G++ K
Sbjct: 103 DYLRECNRQEVNAVV---LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVK 156
Query: 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
VADFGL + Y+ + APE
Sbjct: 157 VADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 187
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ +TM + EF E AV+ +++H +LV LLG C ++ E+M G L
Sbjct: 46 VAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E + + + +A ++ +EYL +++FIHRDL N L+G++ K
Sbjct: 103 DYLRECNRQEVNAVV---LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVK 156
Query: 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
VADFGL + Y+ + APE
Sbjct: 157 VADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 187
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 11/153 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK + + L F+ E+ VL K RH +++ +GY + +V ++ +L
Sbjct: 38 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 96
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
HL T + + IA A+G++YLH+ +S IHRDLK +NI + +D+ K
Sbjct: 97 HHLHIIE----TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVK 149
Query: 728 VADFGL--VKNAPDGKYSVETRLAGTFGYLAPE 758
+ DFGL VK+ G + E +L+G+ ++APE
Sbjct: 150 IGDFGLATVKSRWSGSHQFE-QLSGSILWMAPE 181
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 81/156 (51%), Gaps = 12/156 (7%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
T++A+K ++ TM + F E V+ K+RH LV L Y + E + +V EYM +G
Sbjct: 43 TRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVIEYMSKG 97
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+L L L Q V +A +A G+ Y+ + +++HRDL+ +NIL+G+++
Sbjct: 98 SLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENL 151
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYA 760
KVADFGL + D + + + APE A
Sbjct: 152 VCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAA 187
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 16/158 (10%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
T++A+K ++ TM + F E V+ K+RH LV L Y + E + +V EYM +G
Sbjct: 40 TRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMNKG 94
Query: 665 TLAQHLFEWHDHGYTP--LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
+L L G T L Q V ++ +A G+ Y+ + +++HRDL+ +NIL+G+
Sbjct: 95 SLLDFL-----KGETGKYLRLPQLVDMSAQIASGMAYVERM---NYVHRDLRAANILVGE 146
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYA 760
++ KVADFGL + D +++ + APE A
Sbjct: 147 NLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAA 184
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 18/146 (12%)
Query: 604 DGTKI--AVKRMESNTMGNKGLSEFQAEIAVLTKVRHR-HLVALLGYCINGSERLLVYEY 660
DG ++ A+KRM+ + +F E+ VL K+ H +++ LLG C + L EY
Sbjct: 46 DGLRMDAAIKRMKEYASKDDH-RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEY 104
Query: 661 MPRGTLAQHL-----------FEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFI 709
P G L L F + + L+ +Q + A DVARG++YL +Q+ FI
Sbjct: 105 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFI 161
Query: 710 HRDLKPSNILIGDDMRAKVADFGLVK 735
HR+L NIL+G++ AK+ADFGL +
Sbjct: 162 HRNLAARNILVGENYVAKIADFGLSR 187
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 11/153 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK + + L F+ E+ VL K RH +++ +GY + +V ++ +L
Sbjct: 35 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 93
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
HL T + + IA A+G++YLH+ +S IHRDLK +NI + +D+ K
Sbjct: 94 HHLHIIE----TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVK 146
Query: 728 VADFGL--VKNAPDGKYSVETRLAGTFGYLAPE 758
+ DFGL VK+ G + E +L+G+ ++APE
Sbjct: 147 IGDFGLATVKSRWSGSHQFE-QLSGSILWMAPE 178
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ +TM + EF E AV+ +++H +LV LLG C ++ E+M G L
Sbjct: 45 VAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 101
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E + + + +A ++ +EYL +++FIHRDL N L+G++ K
Sbjct: 102 DYLRECNRQEVNAVV---LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVK 155
Query: 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
VADFGL + Y+ + APE
Sbjct: 156 VADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 186
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 11/153 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK + + L F+ E+ VL K RH +++ +GY + +V ++ +L
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 91
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
HL T + + IA A+G++YLH+ +S IHRDLK +NI + +D+ K
Sbjct: 92 HHLHIIE----TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVK 144
Query: 728 VADFGL--VKNAPDGKYSVETRLAGTFGYLAPE 758
+ DFGL VK+ G + E +L+G+ ++APE
Sbjct: 145 IGDFGLATVKSRWSGSHQFE-QLSGSILWMAPE 176
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ +TM + EF E AV+ +++H +LV LLG C ++ E+M G L
Sbjct: 43 VAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 99
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E + + + +A ++ +EYL +++FIHRDL N L+G++ K
Sbjct: 100 DYLRECNRQEVNAVV---LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVK 153
Query: 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
VADFGL + Y+ + APE
Sbjct: 154 VADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 184
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ +TM + EF E AV+ +++H +LV LLG C ++ E+M G L
Sbjct: 54 VAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 110
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E + + + +A ++ +EYL +++FIHRDL N L+G++ K
Sbjct: 111 DYLRECNRQEVNAVV---LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVK 164
Query: 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
VADFGL + Y+ + APE
Sbjct: 165 VADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 195
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 96 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 147
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + T L GT YL PE
Sbjct: 148 KIADFGWSVHAPSSR---RTELCGTLDYLPPE 176
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ +TM + EF E AV+ +++H +LV LLG C ++ E+M G L
Sbjct: 41 VAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E + + + +A ++ +EYL +++FIHRDL N L+G++ K
Sbjct: 98 DYLRECNRQEVNAVV---LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVK 151
Query: 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
VADFGL + Y+ + APE
Sbjct: 152 VADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 22/153 (14%)
Query: 604 DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663
D +AVK ++ T+ + +FQ E +LT ++H H+V G C +G ++V+EYM
Sbjct: 44 DKMLVAVKALKDPTLAAR--KDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKH 101
Query: 664 GTLAQHLFEWHDHG--------------YTPLTWKQRVTIALDVARGVEYLHSLAQQSFI 709
G L + L HG L Q + IA +A G+ Y LA Q F+
Sbjct: 102 GDLNKFL---RAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVY---LASQHFV 155
Query: 710 HRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
HRDL N L+G ++ K+ DFG+ ++ Y
Sbjct: 156 HRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY 188
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 62 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 121
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 122 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 173
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + T L GT YL PE
Sbjct: 174 KIADFGWSVHAPSSR---RTTLCGTLDYLPPE 202
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ +TM + EF E AV+ +++H +LV LLG C ++ E+M G L
Sbjct: 43 VAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 99
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E + + + +A ++ +EYL +++FIHRDL N L+G++ K
Sbjct: 100 DYLRECNRQEVNAVV---LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVK 153
Query: 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
VADFGL + Y+ + APE
Sbjct: 154 VADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 184
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ +TM + EF E AV+ +++H +LV LLG C ++ E+M G L
Sbjct: 41 VAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E + + + +A ++ +EYL +++FIHRDL N L+G++ K
Sbjct: 98 DYLRECNRQEVNAVV---LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVK 151
Query: 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
VADFGL + Y+ + APE
Sbjct: 152 VADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 10/152 (6%)
Query: 607 KIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
K+A+K + M + +F E V+ K+ H LV L G C+ + LV+E+M G L
Sbjct: 33 KVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL 89
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ +L + + + LDV G+ YL + S IHRDL N L+G++
Sbjct: 90 SDYL----RTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRDLAARNCLVGENQVI 142
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
KV+DFG+ + D +Y+ T + +PE
Sbjct: 143 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 174
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 11/153 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK + + L F+ E+ VL K RH +++ +GY + +V ++ +L
Sbjct: 60 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 118
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
HL T + + IA A+G++YLH+ +S IHRDLK +NI + +D+ K
Sbjct: 119 HHLHIIE----TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVK 171
Query: 728 VADFGL--VKNAPDGKYSVETRLAGTFGYLAPE 758
+ DFGL VK+ G + E +L+G+ ++APE
Sbjct: 172 IGDFGLATVKSRWSGSHQFE-QLSGSILWMAPE 203
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 11/153 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK + + L F+ E+ VL K RH +++ +GY + +V ++ +L
Sbjct: 61 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 119
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
HL T + + IA A+G++YLH+ +S IHRDLK +NI + +D+ K
Sbjct: 120 HHLHIIE----TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVK 172
Query: 728 VADFGL--VKNAPDGKYSVETRLAGTFGYLAPE 758
+ DFGL VK+ G + E +L+G+ ++APE
Sbjct: 173 IGDFGLATVKSRWSGSHQFE-QLSGSILWMAPE 204
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ +TM + EF E AV+ +++H +LV LLG C ++ E+M G L
Sbjct: 42 VAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 98
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E + + + +A ++ +EYL +++FIHRDL N L+G++ K
Sbjct: 99 DYLRECNRQEVNAVV---LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVK 152
Query: 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
VADFGL + Y+ + APE
Sbjct: 153 VADFGLSRLMTGDTYTAPAGAKFPIKWTAPE 183
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 78/159 (49%), Gaps = 16/159 (10%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER--LLVYEYMP 662
G +AVK ++ G + S +Q EI +L + H H+V G C + E+ LV EY+P
Sbjct: 37 GEMVAVKALKEGC-GPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 95
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G+L +L H G L + A + G+ YLH+ Q +IHR L N+L+ +
Sbjct: 96 LGSLRDYLPR-HCVGLAQL-----LLFAQQICEGMAYLHA---QHYIHRALAARNVLLDN 146
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAG---TFGYLAPE 758
D K+ DFGL K P+G R G F Y APE
Sbjct: 147 DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APE 184
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 78/159 (49%), Gaps = 16/159 (10%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER--LLVYEYMP 662
G +AVK ++ G + S +Q EI +L + H H+V G C + E+ LV EY+P
Sbjct: 38 GEMVAVKALKEGC-GPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 96
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G+L +L H G L + A + G+ YLH+ Q +IHR L N+L+ +
Sbjct: 97 LGSLRDYLPR-HCVGLAQL-----LLFAQQICEGMAYLHA---QHYIHRALAARNVLLDN 147
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAG---TFGYLAPE 758
D K+ DFGL K P+G R G F Y APE
Sbjct: 148 DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APE 185
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 53 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 112
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 113 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 164
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + T L GT YL PE
Sbjct: 165 KIADFGWSVHAPSSR---RTTLCGTLDYLPPE 193
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 78/152 (51%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 40 LALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 99
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G +
Sbjct: 100 YREL-----QKLSRFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSNGEL 151
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + T L GT YL PE
Sbjct: 152 KIADFGWSVHAPSSR---RTTLCGTLDYLPPE 180
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ +TM + EF E AV+ +++H +LV LLG C ++ E+M G L
Sbjct: 43 VAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 99
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E + + + +A ++ +EYL +++FIHRDL N L+G++ K
Sbjct: 100 DYLRECNRQEVNAVV---LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVK 153
Query: 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
VADFGL + Y+ + APE
Sbjct: 154 VADFGLSRLMTGDTYTAPAGAKFPIKWTAPE 184
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 99 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 150
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + T L GT YL PE
Sbjct: 151 KIADFGWSVHAPSSR---RTTLCGTLDYLPPE 179
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 96 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 147
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + T L GT YL PE
Sbjct: 148 KIADFGWSVHAPSSR---RTTLCGTLDYLPPE 176
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 78/152 (51%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 96
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 97 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 148
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + T L+GT YL PE
Sbjct: 149 KIADFGWSCHAPSSR---RTTLSGTLDYLPPE 177
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ +TM + EF E AV+ +++H +LV LLG C ++ E+M G L
Sbjct: 248 VAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 304
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E + + + + +A ++ +EYL +++FIHR+L N L+G++ K
Sbjct: 305 DYLRECNRQEVSAVV---LLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVK 358
Query: 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
VADFGL + Y+ + APE
Sbjct: 359 VADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 389
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 100
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 101 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 152
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + T L GT YL PE
Sbjct: 153 KIADFGWSVHAPSSR---RTTLCGTLDYLPPE 181
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 100
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 101 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 152
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + T L GT YL PE
Sbjct: 153 KIADFGWSVHAPSSR---RTTLCGTLDYLPPE 181
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ +TM + EF E AV+ +++H +LV LLG C ++ E+M G L
Sbjct: 39 VAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 95
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E + + + + +A ++ +EYL +++FIHRDL N L+G++ K
Sbjct: 96 DYLRECNRQEVSAVV---LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVK 149
Query: 728 VADFGLVK 735
VADFGL +
Sbjct: 150 VADFGLSR 157
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 100
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 101 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 152
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + T L GT YL PE
Sbjct: 153 KIADFGWSVHAPSSR---RTDLCGTLDYLPPE 181
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 96 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 147
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + T L GT YL PE
Sbjct: 148 KIADFGWSVHAPSSR---RTDLCGTLDYLPPE 176
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 96
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 97 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 148
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + T L GT YL PE
Sbjct: 149 KIADFGWSVHAPSSR---RTDLCGTLDYLPPE 177
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ +TM + EF E AV+ +++H +LV LLG C ++ E+M G L
Sbjct: 39 VAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 95
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E + + + + +A ++ +EYL +++FIHRDL N L+G++ K
Sbjct: 96 DYLRECNRQEVSAVV---LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVK 149
Query: 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
VADFGL + ++ + APE
Sbjct: 150 VADFGLSRLMTGDTFTAHAGAKFPIKWTAPE 180
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 96 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 147
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + T L GT YL PE
Sbjct: 148 KIADFGWSVHAPSSR---RTDLCGTLDYLPPE 176
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ +TM + EF E AV+ +++H +LV LLG C ++ E+M G L
Sbjct: 39 VAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 95
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E + + + + +A ++ +EYL +++FIHRDL N L+G++ K
Sbjct: 96 DYLRECNRQEVSAVV---LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVK 149
Query: 728 VADFGLVK 735
VADFGL +
Sbjct: 150 VADFGLSR 157
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 96 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 147
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + T L GT YL PE
Sbjct: 148 KIADFGWSVHAPSSR---RTXLCGTLDYLPPE 176
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 35 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 94
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 95 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 146
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + T L GT YL PE
Sbjct: 147 KIADFGWSVHAPSSR---RTTLCGTLDYLPPE 175
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 75/133 (56%), Gaps = 10/133 (7%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN--GSERLLVYEYMP 662
G ++AVK ++ + GN +++ + EI +L + H ++V G C G+ L+ E++P
Sbjct: 50 GEQVAVKSLKPESGGNH-IADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP 108
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G+L ++L + KQ++ A+ + +G++YL S + ++HRDL N+L+
Sbjct: 109 SGSLKEYL----PKNKNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVES 161
Query: 723 DMRAKVADFGLVK 735
+ + K+ DFGL K
Sbjct: 162 EHQVKIGDFGLTK 174
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 99 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 150
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + T L GT YL PE
Sbjct: 151 KIADFGWSVHAPSSR---RTTLCGTLDYLPPE 179
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 40 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 99
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 100 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 151
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + T L GT YL PE
Sbjct: 152 KIADFGWSVHAPSSR---RTTLCGTLDYLPPE 180
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 9/128 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ +TM + EF E AV+ +++H +LV LLG C ++ E+M G L
Sbjct: 42 VAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 98
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E + + + +A ++ +EYL +++FIHRDL N L+G++ K
Sbjct: 99 DYLRECNRQEVNAVV---LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVK 152
Query: 728 VADFGLVK 735
VADFGL +
Sbjct: 153 VADFGLSR 160
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 9/128 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ +TM + EF E AV+ +++H +LV LLG C ++ E+M G L
Sbjct: 46 VAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E + + + +A ++ +EYL +++FIHRDL N L+G++ K
Sbjct: 103 DYLRECNRQEVNAVV---LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVK 156
Query: 728 VADFGLVK 735
VADFGL +
Sbjct: 157 VADFGLSR 164
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 75/133 (56%), Gaps = 10/133 (7%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN--GSERLLVYEYMP 662
G ++AVK ++ + GN +++ + EI +L + H ++V G C G+ L+ E++P
Sbjct: 38 GEQVAVKSLKPESGGNH-IADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP 96
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G+L ++L + KQ++ A+ + +G++YL S + ++HRDL N+L+
Sbjct: 97 SGSLKEYL----PKNKNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVES 149
Query: 723 DMRAKVADFGLVK 735
+ + K+ DFGL K
Sbjct: 150 EHQVKIGDFGLTK 162
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ +TM + EF E AV+ +++H +LV LLG C ++ E+M G L
Sbjct: 245 VAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 301
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E + + + +A ++ +EYL +++FIHR+L N L+G++ K
Sbjct: 302 DYLRECNRQEVNAVV---LLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVK 355
Query: 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
VADFGL + Y+ + APE
Sbjct: 356 VADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 386
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 11/153 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK + + L F+ E+ VL K RH +++ +GY + +V ++ +L
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 91
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
HL T + + IA A+G++YLH+ +S IHRDLK +NI + +D+ K
Sbjct: 92 HHLHIIE----TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVK 144
Query: 728 VADFGLV--KNAPDGKYSVETRLAGTFGYLAPE 758
+ DFGL K+ G + E +L+G+ ++APE
Sbjct: 145 IGDFGLATEKSRWSGSHQFE-QLSGSILWMAPE 176
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY PRG +
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEV 100
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 101 YKEL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 152
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + L GT YL PE
Sbjct: 153 KIADFGWSVHAPSSR---RXXLXGTLDYLPPE 181
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 607 KIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
K+A+K + M + +F E V+ K+ H LV L G C+ + LV+E+M G L
Sbjct: 33 KVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL 89
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ +L + + + LDV G+ YL + IHRDL N L+G++
Sbjct: 90 SDYL----RTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVI 142
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
KV+DFG+ + D +Y+ T + +PE
Sbjct: 143 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 174
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 10/152 (6%)
Query: 607 KIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
K+A+K ++ +M +F E V+ K+ H LV L G C+ + LV+E+M G L
Sbjct: 53 KVAIKTIKEGSMSE---DDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL 109
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ +L + + + LDV G+ YL + IHRDL N L+G++
Sbjct: 110 SDYL----RTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVI 162
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
KV+DFG+ + D +Y+ T + +PE
Sbjct: 163 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 194
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 33 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 92
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 93 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 144
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + T L GT YL PE
Sbjct: 145 KIADFGWSVHAPSSR---RTTLCGTLDYLPPE 173
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 607 KIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
K+A+K + M + +F E V+ K+ H LV L G C+ + LV+E+M G L
Sbjct: 36 KVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL 92
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ +L + + + LDV G+ YL + IHRDL N L+G++
Sbjct: 93 SDYL----RTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVI 145
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
KV+DFG+ + D +Y+ T + +PE
Sbjct: 146 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 177
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 607 KIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
K+A+K + M + +F E V+ K+ H LV L G C+ + LV+E+M G L
Sbjct: 31 KVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL 87
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ +L + + + LDV G+ YL + IHRDL N L+G++
Sbjct: 88 SDYL----RTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVI 140
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
KV+DFG+ + D +Y+ T + +PE
Sbjct: 141 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 172
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 99 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 150
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + + L GT YL PE
Sbjct: 151 KIADFGWSVHAPSSRRAA---LCGTLDYLPPE 179
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ +TM + EF E AV+ +++H +LV LLG C ++ E+M G L
Sbjct: 287 VAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 343
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E + + + +A ++ +EYL +++FIHR+L N L+G++ K
Sbjct: 344 DYLRECNRQEVNAVV---LLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVK 397
Query: 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
VADFGL + Y+ + APE
Sbjct: 398 VADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 428
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 11/153 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK + + L F+ E+ VL K RH +++ +GY + +V ++ +L
Sbjct: 53 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 111
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
HL T + + IA A+G++YLH+ +S IHRDLK +NI + +D+ K
Sbjct: 112 HHLHIIE----TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVK 164
Query: 728 VADFGLV--KNAPDGKYSVETRLAGTFGYLAPE 758
+ DFGL K+ G + E +L+G+ ++APE
Sbjct: 165 IGDFGLATEKSRWSGSHQFE-QLSGSILWMAPE 196
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 11/153 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK + + L F+ E+ VL K RH +++ +GY + +V ++ +L
Sbjct: 61 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLY 119
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
HL T + + IA A+G++YLH+ +S IHRDLK +NI + +D+ K
Sbjct: 120 HHLHIIE----TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVK 172
Query: 728 VADFGLV--KNAPDGKYSVETRLAGTFGYLAPE 758
+ DFGL K+ G + E +L+G+ ++APE
Sbjct: 173 IGDFGLATEKSRWSGSHQFE-QLSGSILWMAPE 204
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 40 LALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 99
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G +
Sbjct: 100 YREL-----QKLSRFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSNGEL 151
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + L GT YL PE
Sbjct: 152 KIADFGWSVHAPSSRRDT---LCGTLDYLPPE 180
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K ++ +M EF E V+ + H LV L G C ++ EYM G L
Sbjct: 51 VAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 107
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E T +Q + + DV +EYL S + F+HRDL N L+ D K
Sbjct: 108 NYLREMRHRFQT----QQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVK 160
Query: 728 VADFGLVKNAPDGKYS 743
V+DFGL + D +Y+
Sbjct: 161 VSDFGLSRYVLDDEYT 176
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
TK+A+K ++ TM + F E ++ K++H LV L Y + E + +V EYM +G
Sbjct: 34 TKVAIKTLKPGTMSPES---FLEEAQIMKKLKHDKLVQL--YAVVSEEPIYIVTEYMNKG 88
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+L L D L V +A VA G+ Y+ + ++IHRDL+ +NIL+G+ +
Sbjct: 89 SLLDFL---KDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGNGL 142
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYA 760
K+ADFGL + D + + + APE A
Sbjct: 143 ICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAA 178
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K ++ +M EF E V+ + H LV L G C ++ EYM G L
Sbjct: 31 VAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 87
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E T +Q + + DV +EYL S + F+HRDL N L+ D K
Sbjct: 88 NYLREMRHRFQT----QQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVK 140
Query: 728 VADFGLVKNAPDGKYS 743
V+DFGL + D +Y+
Sbjct: 141 VSDFGLSRYVLDDEYT 156
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 38 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 97
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 98 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 149
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + L GT YL PE
Sbjct: 150 KIADFGWSVHAPSSR---RXXLCGTLDYLPPE 178
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 62 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 121
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 122 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 173
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + L GT YL PE
Sbjct: 174 KIADFGWSVHAPSSR---RDDLCGTLDYLPPE 202
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 80/158 (50%), Gaps = 12/158 (7%)
Query: 623 LSEFQAEIAVLTKVRHRHLVALLGYCINGSER--LLVYEYMPRGTLAQHLFEWHDHGYTP 680
+ + EIA+L K+ H ++V L+ + +E +V+E + +G + + P
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV------PTLKP 133
Query: 681 LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740
L+ Q D+ +G+EYLH Q IHRD+KPSN+L+G+D K+ADFG V N G
Sbjct: 134 LSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFG-VSNEFKG 189
Query: 741 KYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHG 778
++ + GT ++APE + I +W G
Sbjct: 190 SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMG 227
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K ++ +M EF E V+ + H LV L G C ++ EYM G L
Sbjct: 35 VAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 91
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E T +Q + + DV +EYL S + F+HRDL N L+ D K
Sbjct: 92 NYLREMRHRFQT----QQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVK 144
Query: 728 VADFGLVKNAPDGKYS 743
V+DFGL + D +Y+
Sbjct: 145 VSDFGLSRYVLDDEYT 160
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTV 95
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 96 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KKVIHRDIKPENLLLGSAGEL 147
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + + L GT YL PE
Sbjct: 148 KIADFGWSVHAPSSRRAA---LCGTLDYLPPE 176
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 96
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 97 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 148
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + L GT YL PE
Sbjct: 149 KIADFGWSVHAPSSRRDT---LCGTLDYLPPE 177
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 38 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 97
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 98 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 149
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+A+FG +AP + T L GT YL PE
Sbjct: 150 KIANFGWSVHAPSSR---RTTLCGTLDYLPPE 178
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 96 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 147
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + + L GT YL PE
Sbjct: 148 KIADFGWSVHAPSSRRAA---LCGTLDYLPPE 176
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K ++ +M EF E V+ + H LV L G C ++ EYM G L
Sbjct: 36 VAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 92
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E T +Q + + DV +EYL S + F+HRDL N L+ D K
Sbjct: 93 NYLREMRHRFQT----QQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVK 145
Query: 728 VADFGLVKNAPDGKYS 743
V+DFGL + D +Y+
Sbjct: 146 VSDFGLSRYVLDDEYT 161
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K ++ +M EF E V+ + H LV L G C ++ EYM G L
Sbjct: 42 VAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 98
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E T +Q + + DV +EYL S + F+HRDL N L+ D K
Sbjct: 99 NYLREMRHRFQT----QQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVK 151
Query: 728 VADFGLVKNAPDGKYS 743
V+DFGL + D +Y+
Sbjct: 152 VSDFGLSRYVLDDEYT 167
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 21/170 (12%)
Query: 604 DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMP 662
+ +AVK ++ + K LS+ +E+ ++ + +H++++ LLG C ++ EY
Sbjct: 66 EAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYAS 124
Query: 663 RGTLAQHL-------FEW-HDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHR 711
+G L ++L E+ +D P +T+K V+ +ARG+EYL A Q IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 712 DLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVET---RLAGTFGYLAPE 758
DL N+L+ ++ K+ADFGL ++ + Y +T RL ++APE
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP--VKWMAPE 229
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K ++ +M EF E V+ + H LV L G C ++ EYM G L
Sbjct: 36 VAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 92
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E T +Q + + DV +EYL S + F+HRDL N L+ D K
Sbjct: 93 NYLREMRHRFQT----QQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVK 145
Query: 728 VADFGLVKNAPDGKYS 743
V+DFGL + D +Y+
Sbjct: 146 VSDFGLSRYVLDDEYT 161
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 84/161 (52%), Gaps = 17/161 (10%)
Query: 605 GTKIAVKRME--SNTMGNKGLSEFQA----EIAVLTKVR-HRHLVALLGYCINGSERLLV 657
G + AVK ME + + + L E + E +L +V H H++ L+ + S LV
Sbjct: 119 GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178
Query: 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSN 717
++ M +G L +L E L+ K+ +I + V +LH+ + +HRDLKP N
Sbjct: 179 FDLMRKGELFDYLTE-----KVALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPEN 230
Query: 718 ILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
IL+ D+M+ +++DFG + G+ E L GT GYLAPE
Sbjct: 231 ILLDDNMQIRLSDFGFSCHLEPGEKLRE--LCGTPGYLAPE 269
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 21/170 (12%)
Query: 604 DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMP 662
+ +AVK ++ + K LS+ +E+ ++ + +H++++ LLG C ++ EY
Sbjct: 53 EAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 111
Query: 663 RGTLAQHL-------FEW-HDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHR 711
+G L ++L E+ +D P +T+K V+ +ARG+EYL A Q IHR
Sbjct: 112 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 168
Query: 712 DLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVET---RLAGTFGYLAPE 758
DL N+L+ ++ K+ADFGL ++ + Y +T RL ++APE
Sbjct: 169 DLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP--VKWMAPE 216
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 21/170 (12%)
Query: 604 DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMP 662
+ +AVK ++ + K LS+ +E+ ++ + +H++++ LLG C ++ EY
Sbjct: 112 EAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 170
Query: 663 RGTLAQHL-------FEW-HDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHR 711
+G L ++L E+ +D P +T+K V+ +ARG+EYL A Q IHR
Sbjct: 171 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 227
Query: 712 DLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVET---RLAGTFGYLAPE 758
DL N+L+ ++ K+ADFGL ++ + Y +T RL ++APE
Sbjct: 228 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP--VKWMAPE 275
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 96 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 147
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + L GT YL PE
Sbjct: 148 KIADFGWSVHAPSSR---RXXLCGTLDYLPPE 176
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 21/170 (12%)
Query: 604 DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMP 662
+ +AVK ++ + K LS+ +E+ ++ + +H++++ LLG C ++ EY
Sbjct: 55 EAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 113
Query: 663 RGTLAQHL-------FEW-HDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHR 711
+G L ++L E+ +D P +T+K V+ +ARG+EYL A Q IHR
Sbjct: 114 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 170
Query: 712 DLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVET---RLAGTFGYLAPE 758
DL N+L+ ++ K+ADFGL ++ + Y +T RL ++APE
Sbjct: 171 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP--VKWMAPE 218
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 99 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 150
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+A+FG +AP + T L GT YL PE
Sbjct: 151 KIANFGWSVHAPSSR---RTTLCGTLDYLPPE 179
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 99 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 150
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + L GT YL PE
Sbjct: 151 KIADFGWSVHAPSSR---RXXLCGTLDYLPPE 179
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 21/170 (12%)
Query: 604 DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMP 662
+ +AVK ++ + K LS+ +E+ ++ + +H++++ LLG C ++ EY
Sbjct: 58 EAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 116
Query: 663 RGTLAQHL-------FEW-HDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHR 711
+G L ++L E+ +D P +T+K V+ +ARG+EYL A Q IHR
Sbjct: 117 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 173
Query: 712 DLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVET---RLAGTFGYLAPE 758
DL N+L+ ++ K+ADFGL ++ + Y +T RL ++APE
Sbjct: 174 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP--VKWMAPE 221
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 21/170 (12%)
Query: 604 DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMP 662
+ +AVK ++ + K LS+ +E+ ++ + +H++++ LLG C ++ EY
Sbjct: 66 EAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYAS 124
Query: 663 RGTLAQHL-------FEW-HDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHR 711
+G L ++L E+ +D P +T+K V+ +ARG+EYL A Q IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 712 DLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVET---RLAGTFGYLAPE 758
DL N+L+ ++ K+ADFGL ++ + Y +T RL ++APE
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP--VKWMAPE 229
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + G+ + + E+ + + +RH +++ L GY + + L+ EY P GT+
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L + ++ T ++A + Y HS + IHRD+KP N+L+G
Sbjct: 99 YREL-----QKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGEL 150
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + L GT YL PE
Sbjct: 151 KIADFGWSVHAPSSR---RDDLCGTLDYLPPE 179
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 137/287 (47%), Gaps = 23/287 (8%)
Query: 28 DGSVMLKLAQSLQNLPSDWSSTSSTGYC---EWTGINCDNSN---RVTTISLAKSGLSGT 81
D +L++ + L N P+ SS T C W G+ CD RV + L+ L
Sbjct: 7 DKQALLQIKKDLGN-PTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKP 65
Query: 82 LSPEISSLTQLETLSF----QMNNIAGAIP-SLANATSLQDIYLDNNNFT-SVPTGCFDG 135
P SSL L L+F +NN+ G IP ++A T L +Y+ + N + ++P D
Sbjct: 66 Y-PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIP----DF 120
Query: 136 LTNLQVL-SLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNL-QNLR 193
L+ ++ L +L + N P ++ +L + D I G IPD + SFS L ++
Sbjct: 121 LSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMT 180
Query: 194 LSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQ-LRQVWLHKNQFTGPIP 252
+S N TG +P +FA ++ +++ + L G VL G + +++ L KN +
Sbjct: 181 ISRNRLTGKIPPTFANLNLA--FVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG 238
Query: 253 DLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYP 299
+ ++L L LR+N++ G +P + L L ++++ N L G P
Sbjct: 239 KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 116/268 (43%), Gaps = 51/268 (19%)
Query: 185 SFSNLQNLRLSY----NNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQV 240
S +NL L Y NN G +P + AK +TQL +
Sbjct: 71 SLANLPYLNFLYIGGINNLVGPIPPAIAK------------------------LTQLHYL 106
Query: 241 WLHKNQFTGPIPD-LSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYP 299
++ +G IPD LS+ ++L L N L+G +P S+ SLP L+ I+ N++ G P
Sbjct: 107 YITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP 166
Query: 300 ----LFPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNA 355
F +++ N GK P L ++ + + + EG+ +
Sbjct: 167 DSYGSFSKLFTSMTISRNRL------TGK-IPPTFANL-----NLAFVDLSRNMLEGDAS 214
Query: 356 CDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLA 415
+ S I+LA LA ++ + +L L L+ N + G +P GLT+L
Sbjct: 215 -----VLFGSDKNTQKIHLAKNSLAFDLGKVGLS-KNLNGLDLRNNRIYGTLPQGLTQLK 268
Query: 416 SLQNLDVSNNNLSGKVPDFGSNVKFTVS 443
L +L+VS NNL G++P G+ +F VS
Sbjct: 269 FLHSLNVSFNNLCGEIPQGGNLQRFDVS 296
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 64/127 (50%), Gaps = 9/127 (7%)
Query: 326 CDPQ-VTTLLQIAGDMGYPAILSDSWEGNNACD-GWPFVTCSQG----RIITINLANKLL 379
C+PQ LLQI D+G P LS + C+ W V C R+ ++L+ L
Sbjct: 3 CNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNL 62
Query: 380 AGN--ISPAYANLTSLKNLYLQQ-NNLTGPIPDGLTKLASLQNLDVSNNNLSGKVPDFGS 436
I + ANL L LY+ NNL GPIP + KL L L +++ N+SG +PDF S
Sbjct: 63 PKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLS 122
Query: 437 NVKFTVS 443
+K V+
Sbjct: 123 QIKTLVT 129
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 104/275 (37%), Gaps = 75/275 (27%)
Query: 154 PFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQ 213
P P + K T L LY+ + N+ G IPDF L L SYN +G+LP S
Sbjct: 92 PIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPS------- 144
Query: 214 NLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPD-LSKCESLF-DLSLRDNQLT 271
+S + L + N+ +G IPD LF +++ N+LT
Sbjct: 145 -----------------ISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 272 GVVPASVISLPALLNISLQNNKLQGPYP-LFPS--KVQKVSLDHNNFCKNSSDAGKPCDP 328
G +P + +L L + L N L+G LF S QK+ L N
Sbjct: 188 GKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKN--------------- 231
Query: 329 QVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYA 388
+A D+G LS + G ++L N + G +
Sbjct: 232 ------SLAFDLGKVG-LSKNLNG-------------------LDLRNNRIYGTLPQGLT 265
Query: 389 NLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVS 423
L L +L + NNL G IP G +LQ DVS
Sbjct: 266 QLKFLHSLNVSFNNLCGEIPQG----GNLQRFDVS 296
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 83/158 (52%), Gaps = 20/158 (12%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
TK+AVK ++ +M F AE ++ +++H+ LV L Y + E + ++ EYM G
Sbjct: 44 TKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENG 98
Query: 665 TLAQHLFEWHDHGYTP----LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
+L L TP LT + + +A +A G+ ++ ++++IHRDL+ +NIL+
Sbjct: 99 SLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILV 148
Query: 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
D + K+ADFGL + D +Y+ + APE
Sbjct: 149 SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 186
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 83/158 (52%), Gaps = 20/158 (12%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
TK+AVK ++ +M F AE ++ +++H+ LV L Y + E + ++ EYM G
Sbjct: 43 TKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENG 97
Query: 665 TLAQHLFEWHDHGYTP----LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
+L L TP LT + + +A +A G+ ++ ++++IHRDL+ +NIL+
Sbjct: 98 SLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILV 147
Query: 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
D + K+ADFGL + D +Y+ + APE
Sbjct: 148 SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 185
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 83/158 (52%), Gaps = 20/158 (12%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
TK+AVK ++ +M F AE ++ +++H+ LV L Y + E + ++ EYM G
Sbjct: 38 TKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENG 92
Query: 665 TLAQHLFEWHDHGYTP----LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
+L L TP LT + + +A +A G+ ++ ++++IHRDL+ +NIL+
Sbjct: 93 SLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILV 142
Query: 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
D + K+ADFGL + D +Y+ + APE
Sbjct: 143 SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 180
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 83/158 (52%), Gaps = 20/158 (12%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
TK+AVK ++ +M F AE ++ +++H+ LV L Y + E + ++ EYM G
Sbjct: 48 TKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENG 102
Query: 665 TLAQHLFEWHDHGYTP----LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
+L L TP LT + + +A +A G+ ++ ++++IHRDL+ +NIL+
Sbjct: 103 SLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILV 152
Query: 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
D + K+ADFGL + D +Y+ + APE
Sbjct: 153 SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 190
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 83/158 (52%), Gaps = 20/158 (12%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
TK+AVK ++ +M F AE ++ +++H+ LV L Y + E + ++ EYM G
Sbjct: 33 TKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENG 87
Query: 665 TLAQHLFEWHDHGYTP----LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
+L L TP LT + + +A +A G+ ++ ++++IHRDL+ +NIL+
Sbjct: 88 SLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILV 137
Query: 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
D + K+ADFGL + D +Y+ + APE
Sbjct: 138 SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 175
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 88/170 (51%), Gaps = 21/170 (12%)
Query: 604 DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMP 662
+ +AVK ++ + K LS+ +E+ ++ + +H++++ LLG C ++ EY
Sbjct: 66 EAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 663 RGTLAQHL-------FEW-HDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHR 711
+G L ++L E+ +D P +T+K V+ +ARG+EYL A Q IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 712 DLKPSNILIGDDMRAKVADFGLVK---NAPDGKYSVETRLAGTFGYLAPE 758
DL N+L+ ++ K+ADFGL + N K + RL ++APE
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLP--VKWMAPE 229
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 10/152 (6%)
Query: 607 KIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
K+A+K + M + +F E V+ K+ H LV L G C+ + LV E+M G L
Sbjct: 34 KVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCL 90
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ +L + + + LDV G+ YL + IHRDL N L+G++
Sbjct: 91 SDYL----RTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVI 143
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
KV+DFG+ + D +Y+ T + +PE
Sbjct: 144 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 175
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 12/145 (8%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER------LLVYE 659
K+AVK ++++ + + + EF E A + + H H+ L+G + + +++
Sbjct: 52 VKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILP 111
Query: 660 YMPRGTLAQHLFEWHDHGYTP--LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSN 717
+M G L L G P L + V +D+A G+EYL S ++FIHRDL N
Sbjct: 112 FMKHGDLHAFLLA-SRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARN 167
Query: 718 ILIGDDMRAKVADFGLVKNAPDGKY 742
++ +DM VADFGL + G Y
Sbjct: 168 CMLAEDMTVCVADFGLSRKIYSGDY 192
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 21/170 (12%)
Query: 604 DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMP 662
+ +AVK ++ + K LS+ +E+ ++ + +H++++ LLG C ++ EY
Sbjct: 66 EAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 663 RGTLAQHL-------FEW-HDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHR 711
+G L ++L E+ +D P +T+K V+ +ARG+EYL A Q IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 712 DLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVET---RLAGTFGYLAPE 758
DL N+L+ ++ K+ADFGL ++ + Y T RL ++APE
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLP--VKWMAPE 229
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 21/168 (12%)
Query: 604 DGTKIAVKRM-----ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658
D + +A+K + E T + EFQ E+ +++ + H ++V L G N +V
Sbjct: 43 DKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVM 100
Query: 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
E++P G L L D + P+ W ++ + LD+A G+EY+ + +HRDL+ NI
Sbjct: 101 EFVPCGDLYHRLL---DKAH-PIKWSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNI 155
Query: 719 LIGD-----DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAG 761
+ + AKVADFGL + + +SV + L G F ++APE G
Sbjct: 156 FLQSLDENAPVCAKVADFGLSQQS---VHSV-SGLLGNFQWMAPETIG 199
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 90/170 (52%), Gaps = 21/170 (12%)
Query: 604 DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMP 662
+ +AVK ++ + K LS+ +E+ ++ + +H++++ LLG C ++ EY
Sbjct: 66 EAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 663 RGTLAQHL-------FEW-HDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHR 711
+G L ++L E+ +D P +T+K V+ +ARG+EYL A Q IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 712 DLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVET---RLAGTFGYLAPE 758
DL N+L+ ++ ++ADFGL ++ + Y +T RL ++APE
Sbjct: 182 DLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLP--VKWMAPE 229
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 21/170 (12%)
Query: 604 DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMP 662
+ +AVK ++ + K LS+ +E+ ++ + +H++++ LLG C ++ EY
Sbjct: 66 EAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 663 RGTLAQHLFEW--------HDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHR 711
+G L ++L +D P +T+K V+ +ARG+EYL A Q IHR
Sbjct: 125 KGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 712 DLKPSNILIGDDMRAKVADFGLVK---NAPDGKYSVETRLAGTFGYLAPE 758
DL N+L+ ++ K+ADFGL + N K + RL ++APE
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLP--VKWMAPE 229
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 90/170 (52%), Gaps = 21/170 (12%)
Query: 604 DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMP 662
+ +AVK ++ + + LS+ +E+ ++ + +H++++ LLG C ++ EY
Sbjct: 66 EAVTVAVKMLKDDAT-EEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 663 RGTLAQHL-------FEW-HDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHR 711
+G L ++L E+ +D P +T+K V+ +ARG+EYL A Q IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 712 DLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVET---RLAGTFGYLAPE 758
DL N+L+ ++ K+ADFGL ++ + Y +T RL ++APE
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP--VKWMAPE 229
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 25/158 (15%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K++ES + F E+ L++V H ++V L G C+N LV EY G+L
Sbjct: 35 VAIKQIESESERKA----FIVELRQLSRVNHPNIVKLYGACLNPV--CLVMEYAEGGSLY 88
Query: 668 QHLFEWHDHGYTPL---TWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSN-ILIGDD 723
L HG PL T ++ L ++GV YLHS+ ++ IHRDLKP N +L+
Sbjct: 89 NVL-----HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGG 143
Query: 724 MRAKVADFGLVKNAPDGKYSVETRLA---GTFGYLAPE 758
K+ DFG + ++T + G+ ++APE
Sbjct: 144 TVLKICDFGTACD-------IQTHMTNNKGSAAWMAPE 174
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 62/132 (46%), Gaps = 10/132 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K ++ +M EF E V+ + H LV L G C ++ EYM G L
Sbjct: 51 VAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 107
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L E T +Q + + DV +EYL S + F+HRDL N L+ D K
Sbjct: 108 NYLREMRHRFQT----QQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVK 160
Query: 728 VADFGLVKNAPD 739
V+DFGL + D
Sbjct: 161 VSDFGLSRYVLD 172
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 25/158 (15%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K++ES + F E+ L++V H ++V L G C+N LV EY G+L
Sbjct: 34 VAIKQIESESERKA----FIVELRQLSRVNHPNIVKLYGACLNPV--CLVMEYAEGGSLY 87
Query: 668 QHLFEWHDHGYTPL---TWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSN-ILIGDD 723
L HG PL T ++ L ++GV YLHS+ ++ IHRDLKP N +L+
Sbjct: 88 NVL-----HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGG 142
Query: 724 MRAKVADFGLVKNAPDGKYSVETRLA---GTFGYLAPE 758
K+ DFG + ++T + G+ ++APE
Sbjct: 143 TVLKICDFGTACD-------IQTHMTNNKGSAAWMAPE 173
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 9/155 (5%)
Query: 604 DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663
+ TK+AVK ++ TM + F E ++ ++H LV L ++ EYM +
Sbjct: 36 NSTKVAVKTLKPGTMS---VQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAK 92
Query: 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
G+L L D G L + + + +A G+ Y+ ++++IHRDL+ +N+L+ +
Sbjct: 93 GSLLDFLK--SDEGGKVLL-PKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSES 146
Query: 724 MRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
+ K+ADFGL + D +Y+ + APE
Sbjct: 147 LMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 181
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 604 DGTKIAVKRMESNTMGNKG-LSEFQAEIAVLTKVRHRHLVALLGYCINGS-ERLLVYEYM 661
DG KI N + + G +S+F E ++ H ++++LLG C+ L+V YM
Sbjct: 73 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 132
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L + + + P T K + L VA+G++YL A + F+HRDL N ++
Sbjct: 133 KHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLD 185
Query: 722 DDMRAKVADFGLVKNAPDGKY 742
+ KVADFGL ++ D +Y
Sbjct: 186 EKFTVKVADFGLARDMYDKEY 206
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 604 DGTKIAVKRMESNTMGNKG-LSEFQAEIAVLTKVRHRHLVALLGYCINGS-ERLLVYEYM 661
DG KI N + + G +S+F E ++ H ++++LLG C+ L+V YM
Sbjct: 74 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 133
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L + + + P T K + L VA+G++YL A + F+HRDL N ++
Sbjct: 134 KHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLD 186
Query: 722 DDMRAKVADFGLVKNAPDGKY 742
+ KVADFGL ++ D +Y
Sbjct: 187 EKFTVKVADFGLARDMYDKEY 207
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 83/158 (52%), Gaps = 20/158 (12%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
TK+AVK ++ +M F AE ++ +++H+ LV L Y + E + ++ EYM G
Sbjct: 34 TKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENG 88
Query: 665 TLAQHLFEWHDHGYTP----LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
+L L TP LT + + +A +A G+ ++ ++++IHR+L+ +NIL+
Sbjct: 89 SLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRNLRAANILV 138
Query: 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
D + K+ADFGL + D +Y+ + APE
Sbjct: 139 SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 176
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 89/170 (52%), Gaps = 21/170 (12%)
Query: 604 DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMP 662
+ +AVK ++ + K LS+ +E+ ++ + +H++++ LLG C ++ Y
Sbjct: 66 EAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYAS 124
Query: 663 RGTLAQHL-------FEW-HDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHR 711
+G L ++L E+ +D P +T+K V+ +ARG+EYL A Q IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 712 DLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVET---RLAGTFGYLAPE 758
DL N+L+ ++ K+ADFGL ++ + Y +T RL ++APE
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP--VKWMAPE 229
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 604 DGTKIAVKRMESNTMGNKG-LSEFQAEIAVLTKVRHRHLVALLGYCINGS-ERLLVYEYM 661
DG KI N + + G +S+F E ++ H ++++LLG C+ L+V YM
Sbjct: 47 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 106
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L + + + P T K + L VA+G++YL A + F+HRDL N ++
Sbjct: 107 KHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLD 159
Query: 722 DDMRAKVADFGLVKNAPDGKY 742
+ KVADFGL ++ D +Y
Sbjct: 160 EKFTVKVADFGLARDMYDKEY 180
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 604 DGTKIAVKRMESNTMGNKG-LSEFQAEIAVLTKVRHRHLVALLGYCINGS-ERLLVYEYM 661
DG KI N + + G +S+F E ++ H ++++LLG C+ L+V YM
Sbjct: 55 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 114
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L + + + P T K + L VA+G++YL A + F+HRDL N ++
Sbjct: 115 KHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLD 167
Query: 722 DDMRAKVADFGLVKNAPDGKY 742
+ KVADFGL ++ D +Y
Sbjct: 168 EKFTVKVADFGLARDMYDKEY 188
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 21/168 (12%)
Query: 604 DGTKIAVKRM-----ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658
D + +A+K + E T + EFQ E+ +++ + H ++V L G N +V
Sbjct: 43 DKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVM 100
Query: 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
E++P G L L D + P+ W ++ + LD+A G+EY+ + +HRDL+ NI
Sbjct: 101 EFVPCGDLYHRLL---DKAH-PIKWSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNI 155
Query: 719 LIGD-----DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAG 761
+ + AKVADFG + + +SV + L G F ++APE G
Sbjct: 156 FLQSLDENAPVCAKVADFGTSQQS---VHSV-SGLLGNFQWMAPETIG 199
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 606 TKIAVKRM-ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
T++AVK + ES ++ + EF E +V+ H+V LLG G L+V E M G
Sbjct: 48 TRVAVKTVNESASLRER--IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
Query: 665 TLAQHLFEWHDH-----GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
L +L G P T ++ + +A ++A G+ YL++ + F+HRDL N +
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCM 162
Query: 720 IGDDMRAKVADFGLVKNAPDGKY 742
+ D K+ DFG+ ++ + Y
Sbjct: 163 VAHDFTVKIGDFGMTRDIYETAY 185
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 606 TKIAVKRM-ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
T++AVK + ES ++ + EF E +V+ H+V LLG G L+V E M G
Sbjct: 48 TRVAVKTVNESASLRER--IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
Query: 665 TLAQHLFEWHDH-----GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
L +L G P T ++ + +A ++A G+ YL++ + F+HRDL N +
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCM 162
Query: 720 IGDDMRAKVADFGLVKNAPDGKY 742
+ D K+ DFG+ ++ + Y
Sbjct: 163 VAHDFTVKIGDFGMTRDIYETDY 185
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 604 DGTKIAVKRMESNTMGNKG-LSEFQAEIAVLTKVRHRHLVALLGYCINGS-ERLLVYEYM 661
DG KI N + + G +S+F E ++ H ++++LLG C+ L+V YM
Sbjct: 53 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 112
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L + + + P T K + L VA+G++YL A + F+HRDL N ++
Sbjct: 113 KHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLD 165
Query: 722 DDMRAKVADFGLVKNAPDGKY 742
+ KVADFGL ++ D +Y
Sbjct: 166 EKFTVKVADFGLARDMYDKEY 186
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 604 DGTKIAVKRMESNTMGNKG-LSEFQAEIAVLTKVRHRHLVALLGYCINGS-ERLLVYEYM 661
DG KI N + + G +S+F E ++ H ++++LLG C+ L+V YM
Sbjct: 52 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 111
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L + + + P T K + L VA+G++YL A + F+HRDL N ++
Sbjct: 112 KHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLD 164
Query: 722 DDMRAKVADFGLVKNAPDGKY 742
+ KVADFGL ++ D +Y
Sbjct: 165 EKFTVKVADFGLARDMYDKEY 185
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 606 TKIAVKRM-ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
T++AVK + ES ++ + EF E +V+ H+V LLG G L+V E M G
Sbjct: 47 TRVAVKTVNESASLRER--IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 104
Query: 665 TLAQHLFEWHDH-----GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
L +L G P T ++ + +A ++A G+ YL++ + F+HRDL N +
Sbjct: 105 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCM 161
Query: 720 IGDDMRAKVADFGLVKNAPDGKY 742
+ D K+ DFG+ ++ + Y
Sbjct: 162 VAHDFTVKIGDFGMTRDIYETDY 184
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ +M EF E + K+ H LV G C +V EY+ G L
Sbjct: 35 VAVKMIKEGSMSE---DEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLL 91
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+L H G P Q + + DV G+ +L S FIHRDL N L+ D+ K
Sbjct: 92 NYLRS-HGKGLEP---SQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVK 144
Query: 728 VADFGLVKNAPDGKY--SVETRLAGTFGYLAPE 758
V+DFG+ + D +Y SV T+ + APE
Sbjct: 145 VSDFGMTRYVLDDQYVSSVGTKFPVKWS--APE 175
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 604 DGTKIAVKRMESNTMGNKG-LSEFQAEIAVLTKVRHRHLVALLGYCINGS-ERLLVYEYM 661
DG KI N + + G +S+F E ++ H ++++LLG C+ L+V YM
Sbjct: 54 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 113
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L + + + P T K + L VA+G++YL A + F+HRDL N ++
Sbjct: 114 KHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLD 166
Query: 722 DDMRAKVADFGLVKNAPDGKY 742
+ KVADFGL ++ D +Y
Sbjct: 167 EKFTVKVADFGLARDMYDKEY 187
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 604 DGTKIAVKRMESNTMGNKG-LSEFQAEIAVLTKVRHRHLVALLGYCINGS-ERLLVYEYM 661
DG KI N + + G +S+F E ++ H ++++LLG C+ L+V YM
Sbjct: 55 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 114
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L + + + P T K + L VA+G++YL A + F+HRDL N ++
Sbjct: 115 KHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLD 167
Query: 722 DDMRAKVADFGLVKNAPDGKY 742
+ KVADFGL ++ D +Y
Sbjct: 168 EKFTVKVADFGLARDMYDKEY 188
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 21/168 (12%)
Query: 604 DGTKIAVKRM-----ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658
D + +A+K + E T + EFQ E+ +++ + H ++V L G N +V
Sbjct: 43 DKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVM 100
Query: 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
E++P G L L D + P+ W ++ + LD+A G+EY+ + +HRDL+ NI
Sbjct: 101 EFVPCGDLYHRLL---DKAH-PIKWSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNI 155
Query: 719 LIGD-----DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAG 761
+ + AKVADF L + + +SV + L G F ++APE G
Sbjct: 156 FLQSLDENAPVCAKVADFSLSQQS---VHSV-SGLLGNFQWMAPETIG 199
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 14/141 (9%)
Query: 625 EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQ--HLFEWHDHGYTPLT 682
+F+ E+ ++T +++ + + G N E ++YEYM ++ + F D YT
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 683 WKQRVT-IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGK 741
Q + I V Y+H+ +++ HRD+KPSNIL+ + R K++DFG + +
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFG------ESE 200
Query: 742 YSVETRLA---GTFGYLAPEY 759
Y V+ ++ GT+ ++ PE+
Sbjct: 201 YMVDKKIKGSRGTYEFMPPEF 221
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 20/158 (12%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
TK+AVK ++ +M F AE ++ +++H+ LV L Y + E + ++ EYM G
Sbjct: 38 TKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENG 92
Query: 665 TLAQHLFEWHDHGYTP----LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
+L L TP LT + + +A +A G+ ++ ++++IHRDL+ +NIL+
Sbjct: 93 SLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILV 142
Query: 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
D + K+ADFGL + D + + + APE
Sbjct: 143 SDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPE 180
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 14/153 (9%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + + +G+ + + EI + + +RH +++ + Y + L+ E+ PRG L
Sbjct: 43 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 102
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ E HG ++ T ++A + Y H ++ IHRD+KP N+L+G
Sbjct: 103 YK---ELQKHGR--FDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGEL 154
Query: 727 KVADFGLVKNAPDGKYSVETR-LAGTFGYLAPE 758
K+ADFG +AP S+ R + GT YL PE
Sbjct: 155 KIADFGWSVHAP----SLRRRXMCGTLDYLPPE 183
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 9/155 (5%)
Query: 604 DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663
+ TK+AVK ++ TM + F E ++ ++H LV L ++ E+M +
Sbjct: 35 NSTKVAVKTLKPGTMS---VQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAK 91
Query: 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
G+L L D G L K + + +A G+ Y+ ++++IHRDL+ +N+L+ +
Sbjct: 92 GSLLDFLK--SDEGGKVLLPK-LIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSES 145
Query: 724 MRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
+ K+ADFGL + D +Y+ + APE
Sbjct: 146 LMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 180
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 89/170 (52%), Gaps = 21/170 (12%)
Query: 604 DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMP 662
+ +AVK ++ + K LS+ +E+ ++ + +H++++ LLG C ++ Y
Sbjct: 66 EAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYAS 124
Query: 663 RGTLAQHL-------FEW-HDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHR 711
+G L ++L E+ +D P +T+K V+ +ARG+EYL A Q IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 712 DLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVET---RLAGTFGYLAPE 758
DL N+L+ ++ K+ADFGL ++ + Y +T RL ++APE
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP--VKWMAPE 229
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 14/153 (9%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + + +G+ + + EI + + +RH +++ + Y + L+ E+ PRG L
Sbjct: 42 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 101
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ E HG ++ T ++A + Y H ++ IHRD+KP N+L+G
Sbjct: 102 YK---ELQKHGR--FDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGEL 153
Query: 727 KVADFGLVKNAPDGKYSVETR-LAGTFGYLAPE 758
K+ADFG +AP S+ R + GT YL PE
Sbjct: 154 KIADFGWSVHAP----SLRRRXMCGTLDYLPPE 182
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 604 DGTKIAVKRMESNTMGNKG-LSEFQAEIAVLTKVRHRHLVALLGYCINGS-ERLLVYEYM 661
DG KI N + + G +S+F E ++ H ++++LLG C+ L+V YM
Sbjct: 50 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 109
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L + + + P T K + L VA+G++YL A + F+HRDL N ++
Sbjct: 110 KHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLD 162
Query: 722 DDMRAKVADFGLVKNAPDGKY 742
+ KVADFGL ++ D +Y
Sbjct: 163 EKFTVKVADFGLARDMYDKEY 183
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 20/158 (12%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
TK+AVK ++ +M F AE ++ +++H+ LV L Y + E + ++ EYM G
Sbjct: 40 TKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENG 94
Query: 665 TLAQHLFEWHDHGYTP----LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
+L L TP LT + + +A +A G+ ++ ++++IHRDL+ +NIL+
Sbjct: 95 SLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILV 144
Query: 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
D + K+ADFGL + D + + + APE
Sbjct: 145 SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 182
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 14/153 (9%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + + +G+ + + EI + + +RH +++ + Y + L+ E+ PRG L
Sbjct: 42 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 101
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ E HG ++ T ++A + Y H ++ IHRD+KP N+L+G
Sbjct: 102 YK---ELQKHGR--FDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGEL 153
Query: 727 KVADFGLVKNAPDGKYSVETR-LAGTFGYLAPE 758
K+ADFG +AP S+ R + GT YL PE
Sbjct: 154 KIADFGWSVHAP----SLRRRXMCGTLDYLPPE 182
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 20/158 (12%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
TK+AVK ++ +M F AE ++ +++H+ LV L Y + E + ++ EYM G
Sbjct: 39 TKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENG 93
Query: 665 TLAQHLFEWHDHGYTP----LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
+L L TP LT + + +A +A G+ ++ ++++IHRDL+ +NIL+
Sbjct: 94 SLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILV 143
Query: 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
D + K+ADFGL + D + + + APE
Sbjct: 144 SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 181
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 20/158 (12%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
TK+AVK ++ +M F AE ++ +++H+ LV L Y + E + ++ EYM G
Sbjct: 38 TKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENG 92
Query: 665 TLAQHLFEWHDHGYTP----LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
+L L TP LT + + +A +A G+ ++ ++++IHRDL+ +NIL+
Sbjct: 93 SLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILV 142
Query: 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
D + K+ADFGL + D + + + APE
Sbjct: 143 SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 180
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 20/158 (12%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
TK+AVK ++ +M F AE ++ +++H+ LV L Y + E + ++ EYM G
Sbjct: 47 TKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENG 101
Query: 665 TLAQHLFEWHDHGYTP----LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
+L L TP LT + + +A +A G+ ++ ++++IHRDL+ +NIL+
Sbjct: 102 SLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILV 151
Query: 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
D + K+ADFGL + D + + + APE
Sbjct: 152 SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 189
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 20/158 (12%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
TK+AVK ++ +M F AE ++ +++H+ LV L Y + E + ++ EYM G
Sbjct: 46 TKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENG 100
Query: 665 TLAQHLFEWHDHGYTP----LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
+L L TP LT + + +A +A G+ ++ ++++IHRDL+ +NIL+
Sbjct: 101 SLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILV 150
Query: 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
D + K+ADFGL + D + + + APE
Sbjct: 151 SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 188
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 20/158 (12%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
TK+AVK ++ +M F AE ++ +++H+ LV L Y + E + ++ EYM G
Sbjct: 38 TKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENG 92
Query: 665 TLAQHLFEWHDHGYTP----LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
+L L TP LT + + +A +A G+ ++ ++++IHRDL+ +NIL+
Sbjct: 93 SLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILV 142
Query: 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
D + K+ADFGL + D + + + APE
Sbjct: 143 SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 180
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 20/158 (12%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRG 664
TK+AVK ++ +M F AE ++ +++H+ LV L Y + E + ++ EYM G
Sbjct: 44 TKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENG 98
Query: 665 TLAQHLFEWHDHGYTP----LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
+L L TP LT + + +A +A G+ ++ ++++IHRDL+ +NIL+
Sbjct: 99 SLVDFL-------KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILV 148
Query: 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
D + K+ADFGL + D + + + APE
Sbjct: 149 SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 186
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 11/137 (8%)
Query: 606 TKIAVKRM-ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
T++AVK + ES ++ + EF E +V+ H+V LLG G L+V E M G
Sbjct: 48 TRVAVKTVNESASLRER--IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
Query: 665 TLAQHLFEWHDH-----GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
L +L G P T ++ + +A ++A G+ YL++ + F+HRDL N +
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCM 162
Query: 720 IGDDMRAKVADFGLVKN 736
+ D K+ DFG+ ++
Sbjct: 163 VAHDFTVKIGDFGMTRD 179
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 11/137 (8%)
Query: 606 TKIAVKRM-ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
T++AVK + ES ++ + EF E +V+ H+V LLG G L+V E M G
Sbjct: 48 TRVAVKTVNESASLRER--IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
Query: 665 TLAQHLFEWHDH-----GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
L +L G P T ++ + +A ++A G+ YL++ + F+HRDL N +
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCM 162
Query: 720 IGDDMRAKVADFGLVKN 736
+ D K+ DFG+ ++
Sbjct: 163 VAHDFTVKIGDFGMTRD 179
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 11/137 (8%)
Query: 606 TKIAVKRM-ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
T++AVK + ES ++ + EF E +V+ H+V LLG G L+V E M G
Sbjct: 45 TRVAVKTVNESASLRER--IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 102
Query: 665 TLAQHLFEWHDH-----GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
L +L G P T ++ + +A ++A G+ YL++ + F+HRDL N +
Sbjct: 103 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCM 159
Query: 720 IGDDMRAKVADFGLVKN 736
+ D K+ DFG+ ++
Sbjct: 160 VAHDFTVKIGDFGMTRD 176
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGT 665
TK+AVK M+ +M + F AE V+ ++H LV L + ++ E+M +G+
Sbjct: 40 TKVAVKTMKPGSMS---VEAFLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGS 95
Query: 666 LAQHLFEWHDHG-YTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
L L D G PL + + + +A G+ ++ Q+++IHRDL+ +NIL+ +
Sbjct: 96 LLDFLK--SDEGSKQPLP--KLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASL 148
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + D +Y+ + APE
Sbjct: 149 VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 182
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 11/153 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+AVK ++ + F+ E+AVL K RH +++ +GY + +V ++ +L
Sbjct: 61 VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY-MTKDNLAIVTQWCEGSSLY 119
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+HL T Q + IA A+G++YLH+ ++ IHRD+K +NI + + + K
Sbjct: 120 KHLHVQE----TKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVK 172
Query: 728 VADFGL--VKNAPDGKYSVETRLAGTFGYLAPE 758
+ DFGL VK+ G VE + G+ ++APE
Sbjct: 173 IGDFGLATVKSRWSGSQQVE-QPTGSVLWMAPE 204
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGT 665
TK+AVK M+ +M + F AE V+ ++H LV L + ++ E+M +G+
Sbjct: 213 TKVAVKTMKPGSMS---VEAFLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGS 268
Query: 666 LAQHLFEWHDHG-YTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
L L D G PL + + + +A G+ ++ Q+++IHRDL+ +NIL+ +
Sbjct: 269 LLDFLKS--DEGSKQPLP--KLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASL 321
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + D +Y+ + APE
Sbjct: 322 VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 355
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 606 TKIAVKRM-ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
T++AVK + ES ++ + EF E +V+ H+V LLG G L+V E M G
Sbjct: 48 TRVAVKTVNESASLRER--IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
Query: 665 TLAQHLFEWHDH-----GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
L +L G P T ++ + +A ++A G+ YL++ + F+HR+L N +
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRNLAARNCM 162
Query: 720 IGDDMRAKVADFGLVKNAPDGKY 742
+ D K+ DFG+ ++ + Y
Sbjct: 163 VAHDFTVKIGDFGMTRDIYETDY 185
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 606 TKIAVKRM-ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
T++AVK + ES ++ + EF E +V+ H+V LLG G L+V E M G
Sbjct: 49 TRVAVKTVNESASLRER--IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 106
Query: 665 TLAQHLFEWHDH-----GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
L +L G P T ++ + +A ++A G+ YL++ + F+HR+L N +
Sbjct: 107 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRNLAARNCM 163
Query: 720 IGDDMRAKVADFGLVKNAPDGKY 742
+ D K+ DFG+ ++ + Y
Sbjct: 164 VAHDFTVKIGDFGMTRDIYETDY 186
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 23/151 (15%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGT 665
T +AVK ++ N ++ L + +E VL +V H H++ L G C LL+ EY G+
Sbjct: 54 TTVAVKMLKENASPSE-LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGS 112
Query: 666 LAQHLFEWHDHG-------------------YTPLTWKQRVTIALDVARGVEYLHSLAQQ 706
L L E G LT ++ A +++G++YL A+
Sbjct: 113 LRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEM 169
Query: 707 SFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737
S +HRDL NIL+ + + K++DFGL ++
Sbjct: 170 SLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 604 DGTKIAVKRMESNTMGNKG-LSEFQAEIAVLTKVRHRHLVALLGYCINGS-ERLLVYEYM 661
DG KI N + + G +S+F E ++ H ++++LLG C+ L+V YM
Sbjct: 114 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 173
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L + + + P T K + L VA+G+++L A + F+HRDL N ++
Sbjct: 174 KHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLD 226
Query: 722 DDMRAKVADFGLVKNAPDGKY 742
+ KVADFGL ++ D ++
Sbjct: 227 EKFTVKVADFGLARDMYDKEF 247
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 17/164 (10%)
Query: 605 GTKIAVKRMESNTMGN-KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663
G K+AVK + + + + + + EI L RH H++ L S+ +V EY+
Sbjct: 41 GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSG 100
Query: 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
G L ++ + L K+ + + GV+Y H + +HRDLKP N+L+
Sbjct: 101 GELFDYICK-----NGRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAH 152
Query: 724 MRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE------YAG 761
M AK+ADFGL DG++ + G+ Y APE YAG
Sbjct: 153 MNAKIADFGLSNMMSDGEFLRXS--CGSPNYAAPEVISGRLYAG 194
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 9/138 (6%)
Query: 604 DGTKIAVKRMESNTMGNKG-LSEFQAEIAVLTKVRHRHLVALLGYCINGS-ERLLVYEYM 661
DG KI N + + G +S+F E ++ H ++++LLG C+ L+V YM
Sbjct: 54 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 113
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L + + + P T K + L VA+G++YL A + F+HRDL N ++
Sbjct: 114 KHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLD 166
Query: 722 DDMRAKVADFGLVKNAPD 739
+ KVADFGL ++ D
Sbjct: 167 EKFTVKVADFGLARDMYD 184
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 11/137 (8%)
Query: 602 LPDGTKIAVK---RMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658
+P+G + + ++ + T G K EF E ++ + H HLV LLG C++ + + LV
Sbjct: 60 VPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVT 118
Query: 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
+ MP G L +++ E D+ + L + + +A+G+ YL ++ +HRDL N+
Sbjct: 119 QLMPHGCLLEYVHEHKDNIGSQLL----LNWCVQIAKGMMYLE---ERRLVHRDLAARNV 171
Query: 719 LIGDDMRAKVADFGLVK 735
L+ K+ DFGL +
Sbjct: 172 LVKSPNHVKITDFGLAR 188
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 11/137 (8%)
Query: 602 LPDGTKIAVK---RMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658
+P+G + + ++ + T G K EF E ++ + H HLV LLG C++ + + LV
Sbjct: 37 VPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVT 95
Query: 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
+ MP G L +++ E D+ + L + + +A+G+ YL ++ +HRDL N+
Sbjct: 96 QLMPHGCLLEYVHEHKDNIGSQLL----LNWCVQIAKGMMYLE---ERRLVHRDLAARNV 148
Query: 719 LIGDDMRAKVADFGLVK 735
L+ K+ DFGL +
Sbjct: 149 LVKSPNHVKITDFGLAR 165
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 601 ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660
E G AVK + + K S + EIAVL K++H ++VAL + + LV +
Sbjct: 43 EKATGKLFAVKCIPKKALKGKE-SSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQL 101
Query: 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
+ G L + E G+ T K T+ V V YLH + +HRDLKP N+L
Sbjct: 102 VSGGELFDRIVE---KGF--YTEKDASTLIRQVLDAVYYLHRMG---IVHRDLKPENLLY 153
Query: 721 ---GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
++ + ++DFGL K +GK V + GT GY+APE
Sbjct: 154 YSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPE 192
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 14/154 (9%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K + + K S + EIAVL K++H ++VAL +G L+ + + G L
Sbjct: 46 VAIKCIAKEALEGKEGS-MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL---IGDDM 724
+ E G+ T + + V V+YLH L +HRDLKP N+L + +D
Sbjct: 105 DRIVE---KGF--YTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDS 156
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
+ ++DFGL K G SV + GT GY+APE
Sbjct: 157 KIMISDFGLSKMEDPG--SVLSTACGTPGYVAPE 188
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 14/154 (9%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K + + K S + EIAVL K++H ++VAL +G L+ + + G L
Sbjct: 46 VAIKCIAKKALEGKEGS-MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL---IGDDM 724
+ E G+ T + + V V+YLH L +HRDLKP N+L + +D
Sbjct: 105 DRIVE---KGF--YTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDS 156
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
+ ++DFGL K G SV + GT GY+APE
Sbjct: 157 KIMISDFGLSKMEDPG--SVLSTACGTPGYVAPE 188
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 14/154 (9%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K + + K S + EIAVL K++H ++VAL +G L+ + + G L
Sbjct: 46 VAIKCIAKEALEGKEGS-MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL---IGDDM 724
+ E G+ T + + V V+YLH L +HRDLKP N+L + +D
Sbjct: 105 DRIVE---KGF--YTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDS 156
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
+ ++DFGL K G SV + GT GY+APE
Sbjct: 157 KIMISDFGLSKMEDPG--SVLSTACGTPGYVAPE 188
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 604 DGTKIAVKRMESNTMGNKG-LSEFQAEIAVLTKVRHRHLVALLGYCINGS-ERLLVYEYM 661
DG KI N + + G +S+F E ++ H ++++LLG C+ L+V YM
Sbjct: 53 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 112
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L + + + P T K + L VA+G+++L A + F+HRDL N ++
Sbjct: 113 KHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLD 165
Query: 722 DDMRAKVADFGLVKNAPDGKY 742
+ KVADFGL ++ D ++
Sbjct: 166 EKFTVKVADFGLARDMYDKEF 186
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 604 DGTKIAVKRMESNTMGNKG-LSEFQAEIAVLTKVRHRHLVALLGYCINGS-ERLLVYEYM 661
DG KI N + + G +S+F E ++ H ++++LLG C+ L+V YM
Sbjct: 60 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 119
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L + + + P T K + L VA+G+++L A + F+HRDL N ++
Sbjct: 120 KHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLD 172
Query: 722 DDMRAKVADFGLVKNAPDGKY 742
+ KVADFGL ++ D ++
Sbjct: 173 EKFTVKVADFGLARDMYDKEF 193
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Query: 603 PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
P K+A+KR+ + E EI +++ H ++V+ + E LV + +
Sbjct: 38 PKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLS 96
Query: 663 RGT---LAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
G+ + +H+ +H L TI +V G+EYLH Q IHRD+K NIL
Sbjct: 97 GGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNIL 153
Query: 720 IGDDMRAKVADFGLVKNAPDG----KYSVETRLAGTFGYLAPE 758
+G+D ++ADFG+ G + V GT ++APE
Sbjct: 154 LGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 196
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 604 DGTKIAVKRMESNTMGNKG-LSEFQAEIAVLTKVRHRHLVALLGYCINGS-ERLLVYEYM 661
DG KI N + + G +S+F E ++ H ++++LLG C+ L+V YM
Sbjct: 56 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 115
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L + + + P T K + L VA+G+++L A + F+HRDL N ++
Sbjct: 116 KHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLD 168
Query: 722 DDMRAKVADFGLVKNAPDGKY 742
+ KVADFGL ++ D ++
Sbjct: 169 EKFTVKVADFGLARDMYDKEF 189
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 606 TKIAVKRM-ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
T++A+K + E+ +M + EF E +V+ + H+V LLG G L++ E M RG
Sbjct: 49 TRVAIKTVNEAASMRER--IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 106
Query: 665 TLAQHLFEWHDHG-----YTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
L +L P + + + +A ++A G+ YL++ F+HRDL N +
Sbjct: 107 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCM 163
Query: 720 IGDDMRAKVADFGLVKNAPDGKY 742
+ +D K+ DFG+ ++ + Y
Sbjct: 164 VAEDFTVKIGDFGMTRDIYETDY 186
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 604 DGTKIAVKRMESNTMGNKG-LSEFQAEIAVLTKVRHRHLVALLGYCINGS-ERLLVYEYM 661
DG KI N + + G +S+F E ++ H ++++LLG C+ L+V YM
Sbjct: 56 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 115
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L + + + P T K + L VA+G+++L A + F+HRDL N ++
Sbjct: 116 KHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLD 168
Query: 722 DDMRAKVADFGLVKNAPDGKY 742
+ KVADFGL ++ D ++
Sbjct: 169 EKFTVKVADFGLARDMLDKEF 189
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Query: 603 PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
P K+A+KR+ + E EI +++ H ++V+ + E LV + +
Sbjct: 33 PKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLS 91
Query: 663 RGT---LAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
G+ + +H+ +H L TI +V G+EYLH Q IHRD+K NIL
Sbjct: 92 GGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNIL 148
Query: 720 IGDDMRAKVADFGLVKNAPDG----KYSVETRLAGTFGYLAPE 758
+G+D ++ADFG+ G + V GT ++APE
Sbjct: 149 LGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 191
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 604 DGTKIAVKRMESNTMGNKG-LSEFQAEIAVLTKVRHRHLVALLGYCINGS-ERLLVYEYM 661
DG KI N + + G +S+F E ++ H ++++LLG C+ L+V YM
Sbjct: 55 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 114
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L + + + P T K + L VA+G+++L A + F+HRDL N ++
Sbjct: 115 KHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLD 167
Query: 722 DDMRAKVADFGLVKNAPDGKY 742
+ KVADFGL ++ D ++
Sbjct: 168 EKFTVKVADFGLARDMYDKEF 188
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 606 TKIAVKRM-ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
T++A+K + E+ +M + EF E +V+ + H+V LLG G L++ E M RG
Sbjct: 56 TRVAIKTVNEAASMRER--IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 113
Query: 665 TLAQHLFEWHDHG-----YTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
L +L P + + + +A ++A G+ YL++ F+HRDL N +
Sbjct: 114 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCM 170
Query: 720 IGDDMRAKVADFGLVKNAPDGKY 742
+ +D K+ DFG+ ++ + Y
Sbjct: 171 VAEDFTVKIGDFGMTRDIYETDY 193
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 604 DGTKIAVKRMESNTMGNKG-LSEFQAEIAVLTKVRHRHLVALLGYCINGS-ERLLVYEYM 661
DG KI N + + G +S+F E ++ H ++++LLG C+ L+V YM
Sbjct: 55 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 114
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L + + + P T K + L VA+G+++L A + F+HRDL N ++
Sbjct: 115 KHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLD 167
Query: 722 DDMRAKVADFGLVKNAPDGKY 742
+ KVADFGL ++ D ++
Sbjct: 168 EKFTVKVADFGLARDMYDKEF 188
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 606 TKIAVKRM-ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
T++A+K + E+ +M + EF E +V+ + H+V LLG G L++ E M RG
Sbjct: 47 TRVAIKTVNEAASMRER--IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 104
Query: 665 TLAQHLFEWHDHG-----YTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
L +L P + + + +A ++A G+ YL++ F+HRDL N +
Sbjct: 105 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCM 161
Query: 720 IGDDMRAKVADFGLVKNAPDGKY 742
+ +D K+ DFG+ ++ + Y
Sbjct: 162 VAEDFTVKIGDFGMTRDIYETDY 184
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 14/154 (9%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K + + K S + EIAVL K++H ++VAL +G L+ + + G L
Sbjct: 46 VAIKCIAKEALEGKEGS-MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL---IGDDM 724
+ E G+ T + + V V+YLH L +HRDLKP N+L + +D
Sbjct: 105 DRIVE---KGF--YTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDS 156
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
+ ++DFGL K G SV + GT GY+APE
Sbjct: 157 KIMISDFGLSKMEDPG--SVLSTACGTPGYVAPE 188
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 606 TKIAVKRM-ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
T++A+K + E+ +M + EF E +V+ + H+V LLG G L++ E M RG
Sbjct: 43 TRVAIKTVNEAASMRER--IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 100
Query: 665 TLAQHLFEWHDHG-----YTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
L +L P + + + +A ++A G+ YL++ F+HRDL N +
Sbjct: 101 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCM 157
Query: 720 IGDDMRAKVADFGLVKNAPDGKY 742
+ +D K+ DFG+ ++ + Y
Sbjct: 158 VAEDFTVKIGDFGMTRDIYETDY 180
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 606 TKIAVKRM-ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
T++A+K + E+ +M + EF E +V+ + H+V LLG G L++ E M RG
Sbjct: 50 TRVAIKTVNEAASMRER--IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 107
Query: 665 TLAQHLFEWHDHG-----YTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
L +L P + + + +A ++A G+ YL++ F+HRDL N +
Sbjct: 108 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCM 164
Query: 720 IGDDMRAKVADFGLVKNAPDGKY 742
+ +D K+ DFG+ ++ + Y
Sbjct: 165 VAEDFTVKIGDFGMTRDIYETDY 187
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 11/143 (7%)
Query: 606 TKIAVKRM-ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
T++A+K + E+ +M + EF E +V+ + H+V LLG G L++ E M RG
Sbjct: 56 TRVAIKTVNEAASMRER--IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 113
Query: 665 TLAQHLFEWH-----DHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
L +L + P + + + +A ++A G+ YL++ F+HRDL N +
Sbjct: 114 DLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCM 170
Query: 720 IGDDMRAKVADFGLVKNAPDGKY 742
+ +D K+ DFG+ ++ + Y
Sbjct: 171 VAEDFTVKIGDFGMTRDIYETDY 193
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 606 TKIAVKRM-ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
T++A+K + E+ +M + EF E +V+ + H+V LLG G L++ E M RG
Sbjct: 49 TRVAIKTVNEAASMRER--IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 106
Query: 665 TLAQHLFEWHDHG-----YTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
L +L P + + + +A ++A G+ YL++ F+HRDL N +
Sbjct: 107 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCM 163
Query: 720 IGDDMRAKVADFGLVKNAPDGKY 742
+ +D K+ DFG+ ++ + Y
Sbjct: 164 VAEDFTVKIGDFGMTRDIYETDY 186
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 11/143 (7%)
Query: 606 TKIAVKRM-ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
T++A+K + E+ +M + EF E +V+ + H+V LLG G L++ E M RG
Sbjct: 46 TRVAIKTVNEAASMRER--IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 103
Query: 665 TLAQHLFEWH-----DHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
L +L + P + + + +A ++A G+ YL++ F+HRDL N +
Sbjct: 104 DLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCM 160
Query: 720 IGDDMRAKVADFGLVKNAPDGKY 742
+ +D K+ DFG+ ++ + Y
Sbjct: 161 VAEDFTVKIGDFGMTRDIYETDY 183
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 606 TKIAVKRM-ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
T++A+K + E+ +M + EF E +V+ + H+V LLG G L++ E M RG
Sbjct: 78 TRVAIKTVNEAASMRER--IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 135
Query: 665 TLAQHLFEWHDHG-----YTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
L +L P + + + +A ++A G+ YL++ F+HRDL N +
Sbjct: 136 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCM 192
Query: 720 IGDDMRAKVADFGLVKNAPDGKY 742
+ +D K+ DFG+ ++ + Y
Sbjct: 193 VAEDFTVKIGDFGMTRDIYETDY 215
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 11/137 (8%)
Query: 606 TKIAVKRM-ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
T++A+K + E+ +M + EF E +V+ + H+V LLG G L++ E M RG
Sbjct: 50 TRVAIKTVNEAASMRER--IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 107
Query: 665 TLAQHLFEWHDHG-----YTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
L +L P + + + +A ++A G+ YL++ F+HRDL N +
Sbjct: 108 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCM 164
Query: 720 IGDDMRAKVADFGLVKN 736
+ +D K+ DFG+ ++
Sbjct: 165 VAEDFTVKIGDFGMTRD 181
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 11/137 (8%)
Query: 606 TKIAVKRM-ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
T++A+K + E+ +M + EF E +V+ + H+V LLG G L++ E M RG
Sbjct: 41 TRVAIKTVNEAASMRER--IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 98
Query: 665 TLAQHLFEWHDHG-----YTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
L +L P + + + +A ++A G+ YL++ F+HRDL N +
Sbjct: 99 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCM 155
Query: 720 IGDDMRAKVADFGLVKN 736
+ +D K+ DFG+ ++
Sbjct: 156 VAEDFTVKIGDFGMTRD 172
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 23/151 (15%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGT 665
T +AVK ++ N ++ L + +E VL +V H H++ L G C LL+ EY G+
Sbjct: 54 TTVAVKMLKENASPSE-LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGS 112
Query: 666 LAQHLFEWHDHG-------------------YTPLTWKQRVTIALDVARGVEYLHSLAQQ 706
L L E G LT ++ A +++G++YL A+
Sbjct: 113 LRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEM 169
Query: 707 SFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737
+HRDL NIL+ + + K++DFGL ++
Sbjct: 170 KLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 23/151 (15%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGT 665
T +AVK ++ N ++ L + +E VL +V H H++ L G C LL+ EY G+
Sbjct: 54 TTVAVKMLKENASPSE-LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGS 112
Query: 666 LAQHLFEWHDHG-------------------YTPLTWKQRVTIALDVARGVEYLHSLAQQ 706
L L E G LT ++ A +++G++YL A+
Sbjct: 113 LRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEM 169
Query: 707 SFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737
+HRDL NIL+ + + K++DFGL ++
Sbjct: 170 KLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G ++AVK+M+ + L E+ ++ H ++V + + G E +V E++ G
Sbjct: 70 GKQVAVKKMDLRKQQRREL--LFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGG 127
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
L + +T + +Q T+ L V R + YLH+ Q IHRD+K +IL+ D
Sbjct: 128 ALTDIV------THTRMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDG 178
Query: 725 RAKVADFGLV----KNAPDGKYSVETRLAGTFGYLAPEYAGK 762
R K++DFG K P K L GT ++APE +
Sbjct: 179 RIKLSDFGFCAQVSKEVPKRKX-----LVGTPYWMAPEVISR 215
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 19/164 (11%)
Query: 605 GTKIAVK--RMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
G ++AVK R + + ++ + + E + ++H +++AL G C+ LV E+
Sbjct: 30 GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFAR 89
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI-- 720
G L + L + W A+ +ARG+ YLH A IHRDLK SNILI
Sbjct: 90 GGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQ 143
Query: 721 ----GD--DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
GD + K+ DFGL + + + + AG + ++APE
Sbjct: 144 KVENGDLSNKILKITDFGLAR---EWHRTTKMSAAGAYAWMAPE 184
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 17/164 (10%)
Query: 605 GTKIAVKRMESNTMGN-KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663
G K+AVK + + + + + + EI L RH H++ L ++ +V EY+
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
G L ++ + HG +R + + V+Y H + +HRDLKP N+L+
Sbjct: 96 GELFDYICK---HGRVEEMEARR--LFQQILSAVDYCH---RHMVVHRDLKPENVLLDAH 147
Query: 724 MRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE------YAG 761
M AK+ADFGL DG++ ++ G+ Y APE YAG
Sbjct: 148 MNAKIADFGLSNMMSDGEFLRDS--CGSPNYAAPEVISGRLYAG 189
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 18/155 (11%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRV 687
E +L KV R +V+L Y + L LV M G L H++ G+ + V
Sbjct: 234 EKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPE---ARAV 289
Query: 688 TIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETR 747
A ++ G+E LH ++ ++RDLKP NIL+ D +++D GL + P+G+ +++ R
Sbjct: 290 FYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-TIKGR 345
Query: 748 LAGTFGYLAPE--------YAGKHWMILCQMTGLI 774
+ GT GY+APE ++ W + C + +I
Sbjct: 346 V-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMI 379
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 10/131 (7%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRV 687
E +L KV R +V+L Y + L LV M G L H++ G+ + V
Sbjct: 234 EKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPE---ARAV 289
Query: 688 TIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETR 747
A ++ G+E LH ++ ++RDLKP NIL+ D +++D GL + P+G+ +++ R
Sbjct: 290 FYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-TIKGR 345
Query: 748 LAGTFGYLAPE 758
+ GT GY+APE
Sbjct: 346 V-GTVGYMAPE 355
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 606 TKIAVKRM-ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
T++A+K + E+ +M + EF E +V+ + H+V LLG G L++ E M RG
Sbjct: 43 TRVAIKTVNEAASMRER--IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 100
Query: 665 TLAQHLFEWHDHG-----YTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
L +L P + + + +A ++A G+ YL++ F+HRDL N
Sbjct: 101 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCX 157
Query: 720 IGDDMRAKVADFGLVKNAPDGKY 742
+ +D K+ DFG+ ++ + Y
Sbjct: 158 VAEDFTVKIGDFGMTRDIYETDY 180
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 31/173 (17%)
Query: 626 FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQ 685
F E+ V+ + H +++ +G + EY+ GTL + + + D Y W Q
Sbjct: 54 FLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL-RGIIKSMDSQYP---WSQ 109
Query: 686 RVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV------KNAPD 739
RV+ A D+A G+ YLHS+ + IHRDL N L+ ++ VADFGL K P+
Sbjct: 110 RVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166
Query: 740 GKYSVET-------RLAGTFGYLAPEYA-GKHW----------MILCQMTGLI 774
G S++ + G ++APE G+ + ++LC++ G +
Sbjct: 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRV 219
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 13/148 (8%)
Query: 601 ELPDGTKIAVKRMESNTMG--NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658
+LP +I+V +++ +G K +F E +++ + H +++ L G ++V
Sbjct: 67 KLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125
Query: 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
EYM G+L L + HD +T + Q V + +A G++YL + F+HRDL NI
Sbjct: 126 EYMENGSLDSFLRK-HDAQFTVI---QLVGMLRGIASGMKYLSDMG---FVHRDLAARNI 178
Query: 719 LIGDDMRAKVADFGL---VKNAPDGKYS 743
LI ++ KV+DFGL +++ P+ Y+
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDDPEAAYT 206
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 605 GTKIAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663
G K+A+K + + + + EI+ L +RH H++ L + E ++V EY
Sbjct: 38 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-- 95
Query: 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
LF++ ++ ++ + VEY H + +HRDLKP N+L+ +
Sbjct: 96 ---GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEH 148
Query: 724 MRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE------YAG 761
+ K+ADFGL DG + + G+ Y APE YAG
Sbjct: 149 LNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVISGKLYAG 190
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 8/138 (5%)
Query: 623 LSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLT 682
L F+ E+ +++ H+++V+++ LV EY+ TL++++ HG PL+
Sbjct: 55 LKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI---ESHG--PLS 109
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
+ + G+++ H + +HRD+KP NILI + K+ DFG+ K +
Sbjct: 110 VDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166
Query: 743 SVETRLAGTFGYLAPEYA 760
+ + GT Y +PE A
Sbjct: 167 TQTNHVLGTVQYFSPEQA 184
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 19/163 (11%)
Query: 601 ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660
E G K+A K +++ M +K E + EI+V+ ++ H +L+ L + ++ +LV EY
Sbjct: 110 ETATGLKLAAKIIKTRGMKDK--EEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEY 167
Query: 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
+ G L + D Y LT + + G+ ++H Q +H DLKP NIL
Sbjct: 168 VDGGELFDRII---DESYN-LTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILC 220
Query: 721 --GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFG---YLAPE 758
D + K+ DFGL + +Y +L FG +LAPE
Sbjct: 221 VNRDAKQIKIIDFGLAR-----RYKPREKLKVNFGTPEFLAPE 258
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 605 GTKIAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663
G K+A+K + + + + EI+ L +RH H++ L + E ++V EY
Sbjct: 39 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-- 96
Query: 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
LF++ ++ ++ + VEY H + +HRDLKP N+L+ +
Sbjct: 97 ---GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEH 149
Query: 724 MRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE------YAG 761
+ K+ADFGL DG + + G+ Y APE YAG
Sbjct: 150 LNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVISGKLYAG 191
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 605 GTKIAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663
G K+A+K + + + + EI+ L +RH H++ L + E ++V EY
Sbjct: 29 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-- 86
Query: 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
LF++ ++ ++ + VEY H + +HRDLKP N+L+ +
Sbjct: 87 ---GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEH 139
Query: 724 MRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE------YAG 761
+ K+ADFGL DG + + G+ Y APE YAG
Sbjct: 140 LNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVISGKLYAG 181
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 605 GTKIAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663
G K+A+K + + + + EI+ L +RH H++ L + E ++V EY
Sbjct: 33 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-- 90
Query: 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
LF++ ++ ++ + VEY H + +HRDLKP N+L+ +
Sbjct: 91 ---GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEH 143
Query: 724 MRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE------YAG 761
+ K+ADFGL DG + + G+ Y APE YAG
Sbjct: 144 LNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVISGKLYAG 185
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 17/164 (10%)
Query: 605 GTKIAVKRMESNTMGN-KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663
G K+AVK + + + + + + EI L RH H++ L ++ +V EY+
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
G L ++ + HG +R + + V+Y H + +HRDLKP N+L+
Sbjct: 96 GELFDYICK---HGRVEEMEARR--LFQQILSAVDYCH---RHMVVHRDLKPENVLLDAH 147
Query: 724 MRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE------YAG 761
M AK+ADFGL DG++ + G+ Y APE YAG
Sbjct: 148 MNAKIADFGLSNMMSDGEFLRTS--CGSPNYAAPEVISGRLYAG 189
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 7/67 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP-DGKYSVETRLAGT 751
+ +GV+Y+HS + IHRDLKPSNI + D + K+ DFGLV + DGK TR GT
Sbjct: 145 ITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK---RTRSKGT 198
Query: 752 FGYLAPE 758
Y++PE
Sbjct: 199 LRYMSPE 205
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 13/148 (8%)
Query: 601 ELPDGTKIAVKRMESNTMG--NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658
+LP +I+V +++ +G K +F E +++ + H +++ L G ++V
Sbjct: 38 KLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 96
Query: 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
EYM G+L L + HD +T + Q V + +A G++YL + ++HRDL NI
Sbjct: 97 EYMENGSLDSFLRK-HDAQFTVI---QLVGMLRGIASGMKYLSDMG---YVHRDLAARNI 149
Query: 719 LIGDDMRAKVADFGL---VKNAPDGKYS 743
LI ++ KV+DFGL +++ P+ Y+
Sbjct: 150 LINSNLVCKVSDFGLSRVLEDDPEAAYT 177
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 13/148 (8%)
Query: 601 ELPDGTKIAVKRMESNTMG--NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658
+LP +I+V +++ +G K +F E +++ + H +++ L G ++V
Sbjct: 55 KLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 113
Query: 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
EYM G+L L + HD +T + Q V + +A G++YL + ++HRDL NI
Sbjct: 114 EYMENGSLDSFLRK-HDAQFTVI---QLVGMLRGIASGMKYLSDMG---YVHRDLAARNI 166
Query: 719 LIGDDMRAKVADFGL---VKNAPDGKYS 743
LI ++ KV+DFGL +++ P+ Y+
Sbjct: 167 LINSNLVCKVSDFGLSRVLEDDPEAAYT 194
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 78/148 (52%), Gaps = 13/148 (8%)
Query: 601 ELPDGTKIAVKRMESNTMG--NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658
+LP +I+V +++ +G K +F E +++ + H +++ L G ++V
Sbjct: 67 KLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125
Query: 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
EYM G+L L + HD +T + Q V + +A G++YL + ++HRDL NI
Sbjct: 126 EYMENGSLDSFLRK-HDAQFTVI---QLVGMLRGIASGMKYLSDMG---YVHRDLAARNI 178
Query: 719 LIGDDMRAKVADFGLVK---NAPDGKYS 743
LI ++ KV+DFGL + + P+ Y+
Sbjct: 179 LINSNLVCKVSDFGLARVLEDDPEAAYT 206
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 608 IAVKRMESNTMGN-KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+AVK ++ + + + + +F E+ + + HR+L+ L G + ++ V E P G+L
Sbjct: 43 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 101
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
L + G+ L R A+ VA G+ YL S + FIHRDL N+L+
Sbjct: 102 LDRLRK--HQGHFLLGTLSRY--AVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLV 154
Query: 727 KVADFGLVKNAP--DGKYSVETRLAGTFGYLAPE--------YAGKHWMI 766
K+ DFGL++ P D Y ++ F + APE +A WM
Sbjct: 155 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 204
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 13/148 (8%)
Query: 601 ELPDGTKIAVKRMESNTMG--NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658
+LP +I+V +++ +G K +F E +++ + H +++ L G ++V
Sbjct: 67 KLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125
Query: 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
EYM G+L L + HD +T + Q V + +A G++YL + ++HRDL NI
Sbjct: 126 EYMENGSLDSFLRK-HDAQFTVI---QLVGMLRGIASGMKYLSDMG---YVHRDLAARNI 178
Query: 719 LIGDDMRAKVADFGL---VKNAPDGKYS 743
LI ++ KV+DFGL +++ P+ Y+
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDDPEAAYT 206
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 13/148 (8%)
Query: 601 ELPDGTKIAVKRMESNTMG--NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658
+LP +I+V +++ +G K +F E +++ + H +++ L G ++V
Sbjct: 67 KLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125
Query: 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
EYM G+L L + HD +T + Q V + +A G++YL + ++HRDL NI
Sbjct: 126 EYMENGSLDSFLRK-HDAQFTVI---QLVGMLRGIASGMKYLSDMG---YVHRDLAARNI 178
Query: 719 LIGDDMRAKVADFGL---VKNAPDGKYS 743
LI ++ KV+DFGL +++ P+ Y+
Sbjct: 179 LINSNLVCKVSDFGLGRVLEDDPEAAYT 206
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 13/148 (8%)
Query: 601 ELPDGTKIAVKRMESNTMG--NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658
+LP +I+V +++ +G K +F E +++ + H +++ L G ++V
Sbjct: 67 KLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125
Query: 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
EYM G+L L + HD +T + Q V + +A G++YL + ++HRDL NI
Sbjct: 126 EYMENGSLDSFLRK-HDAQFTVI---QLVGMLRGIASGMKYLSDMG---YVHRDLAARNI 178
Query: 719 LIGDDMRAKVADFGL---VKNAPDGKYS 743
LI ++ KV+DFGL +++ P+ Y+
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDDPEAAYT 206
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 13/148 (8%)
Query: 601 ELPDGTKIAVKRMESNTMG--NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658
+LP +I+V +++ +G K +F E +++ + H +++ L G ++V
Sbjct: 67 KLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125
Query: 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
EYM G+L L + HD +T + Q V + +A G++YL + ++HRDL NI
Sbjct: 126 EYMENGSLDSFLRK-HDAQFTVI---QLVGMLRGIASGMKYLSDMG---YVHRDLAARNI 178
Query: 719 LIGDDMRAKVADFGL---VKNAPDGKYS 743
LI ++ KV+DFGL +++ P+ Y+
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDDPEAAYT 206
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 608 IAVKRMESNTMGN-KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+AVK ++ + + + + +F E+ + + HR+L+ L G + ++ V E P G+L
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 97
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
L + G+ L R A+ VA G+ YL S + FIHRDL N+L+
Sbjct: 98 LDRLRK--HQGHFLLGTLSRY--AVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLV 150
Query: 727 KVADFGLVKNAP--DGKYSVETRLAGTFGYLAPE--------YAGKHWMI 766
K+ DFGL++ P D Y ++ F + APE +A WM
Sbjct: 151 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 200
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 13/161 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSE-FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663
G ++A+K ++ M G+ + Q E+ + +++H ++ L Y + + LV E
Sbjct: 36 GLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHN 95
Query: 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
G + ++L + P + + + G+ YLHS +HRDL SN+L+ +
Sbjct: 96 GEMNRYL----KNRVKPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRN 148
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPEYAGK 762
M K+ADFGL P K+ L GT Y++PE A +
Sbjct: 149 MNIKIADFGLATQLKMPHEKHYT---LCGTPNYISPEIATR 186
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 13/148 (8%)
Query: 601 ELPDGTKIAVKRMESNTMG--NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658
+LP +I+V +++ +G K +F E +++ + H +++ L G ++V
Sbjct: 67 KLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125
Query: 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
EYM G+L L + HD +T + Q V + +A G++YL + ++HRDL NI
Sbjct: 126 EYMENGSLDSFLRK-HDAQFTVI---QLVGMLRGIASGMKYLSDMG---YVHRDLAARNI 178
Query: 719 LIGDDMRAKVADFGL---VKNAPDGKYS 743
LI ++ KV+DFGL +++ P+ Y+
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDDPEAAYT 206
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 9/141 (6%)
Query: 620 NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYT 679
K +F E +++ + H ++V L G G ++V E+M G L L + HD +T
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRK-HDGQFT 143
Query: 680 PLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739
+ Q V + +A G+ YL A ++HRDL NIL+ ++ KV+DFGL + D
Sbjct: 144 VI---QLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIED 197
Query: 740 GKYSVETRLAGTF--GYLAPE 758
+V T G + APE
Sbjct: 198 DPEAVYTTTGGKIPVRWTAPE 218
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 608 IAVKRMESNTMGN-KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+AVK ++ + + + + +F E+ + + HR+L+ L G + ++ V E P G+L
Sbjct: 43 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 101
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
L + G+ L R A+ VA G+ YL S + FIHRDL N+L+
Sbjct: 102 LDRLRK--HQGHFLLGTLSRY--AVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLV 154
Query: 727 KVADFGLVKNAP--DGKYSVETRLAGTFGYLAPE--------YAGKHWMI 766
K+ DFGL++ P D Y ++ F + APE +A WM
Sbjct: 155 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 204
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 13/148 (8%)
Query: 601 ELPDGTKIAVKRMESNTMG--NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658
+LP +I+V +++ +G K +F E +++ + H +++ L G ++V
Sbjct: 65 KLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 123
Query: 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
EYM G+L L + HD +T + Q V + +A G++YL + ++HRDL NI
Sbjct: 124 EYMENGSLDSFLRK-HDAQFTVI---QLVGMLRGIASGMKYLSDMG---YVHRDLAARNI 176
Query: 719 LIGDDMRAKVADFGL---VKNAPDGKYS 743
LI ++ KV+DFGL +++ P+ Y+
Sbjct: 177 LINSNLVCKVSDFGLSRVLEDDPEAAYT 204
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
Query: 608 IAVKRMESNTMGN-KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+AVK ++ + + + + +F E+ + + HR+L+ L G + ++ V E P G+L
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 107
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
L + H A+ VA G+ YL S + FIHRDL N+L+
Sbjct: 108 LDRLRKHQGH----FLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLV 160
Query: 727 KVADFGLVKNAP--DGKYSVETRLAGTFGYLAPE--------YAGKHWMI 766
K+ DFGL++ P D Y ++ F + APE +A WM
Sbjct: 161 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 210
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 608 IAVKRMESNTMGN-KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+AVK ++ + + + + +F E+ + + HR+L+ L G + ++ V E P G+L
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 97
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
L + G+ L R A+ VA G+ YL S + FIHRDL N+L+
Sbjct: 98 LDRLRK--HQGHFLLGTLSRY--AVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLV 150
Query: 727 KVADFGLVKNAP--DGKYSVETRLAGTFGYLAPE--------YAGKHWMI 766
K+ DFGL++ P D Y ++ F + APE +A WM
Sbjct: 151 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 200
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 10/140 (7%)
Query: 602 LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN----GSERLLV 657
L DG A+KR+ + ++ ++ +A++ L H +++ L+ YC+ E L+
Sbjct: 51 LHDGHFYALKRILCHEQQDREEAQREADMHRL--FNHPNILRLVAYCLRERGAKHEAWLL 108
Query: 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSN 717
+ RGTL + D G LT Q + + L + RG+E +H+ + + HRDLKP+N
Sbjct: 109 LPFFKRGTLWNEIERLKDKG-NFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTN 164
Query: 718 ILIGDDMRAKVADFGLVKNA 737
IL+GD+ + + D G + A
Sbjct: 165 ILLGDEGQPVLMDLGSMNQA 184
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 102/243 (41%), Gaps = 33/243 (13%)
Query: 53 GYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLA-- 110
C+ G C +N ++ + L+ S I + T+ L Q N ++ ++PS A
Sbjct: 3 ALCKKDGGVCSCNNNKNSVDCSSKKLTAIPS-NIPADTK--KLDLQSNKLS-SLPSKAFH 58
Query: 111 NATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYM 170
T L+ +YL++N ++P G F L NL+ L ++DN L P + +L L +
Sbjct: 59 RLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDN-KLQALPI-GVFDQLVNLAELRL 116
Query: 171 DNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDV 230
D + L P FDS + L L L YN SLP G D
Sbjct: 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLP--------------------KGVFDK 155
Query: 231 LSGMTQLRQVWLHKNQFTG-PIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISL 289
L+ + +LR L+ NQ P K L L L +NQL V + SL L + L
Sbjct: 156 LTSLKELR---LYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQL 212
Query: 290 QNN 292
Q N
Sbjct: 213 QEN 215
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 63 DNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLA--NATSLQDIYL 120
D+ ++T +SL + L LT L+ L NN +P A T L+ + L
Sbjct: 130 DSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRL-YNNQLKRVPEGAFDKLTELKTLKL 188
Query: 121 DNNNFTSVPTGCFDGLTNLQVLSLSDNP 148
DNN VP G FD L L++L L +NP
Sbjct: 189 DNNQLKRVPEGAFDSLEKLKMLQLQENP 216
Score = 30.0 bits (66), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 198 NFTGSLPA-SFAK-SDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTG-PIPDL 254
N SLP+ +F + + ++ L++ND +L + + + L +W+ N+ PI
Sbjct: 47 NKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVF 105
Query: 255 SKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQ 295
+ +L +L L NQL + P SL L +SL N+LQ
Sbjct: 106 DQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ 146
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 12/131 (9%)
Query: 606 TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGT 665
TK+AVK M+ +M + F AE V+ ++H LV L + ++ E+M +G+
Sbjct: 207 TKVAVKTMKPGSMS---VEAFLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGS 262
Query: 666 LAQHLFEWHDHG-YTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
L L D G PL + + + +A G+ ++ Q+++IHRDL+ +NIL+ +
Sbjct: 263 LLDFLKS--DEGSKQPLP--KLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASL 315
Query: 725 RAKVADFGLVK 735
K+ADFGL +
Sbjct: 316 VCKIADFGLAR 326
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K +++ + +F +E +++ + H +++ L G G ++V EYM G+L
Sbjct: 80 VAIKALKAGYT-ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
L HD +T + Q V + V G+ YL L ++HRDL N+L+ ++ K
Sbjct: 139 TFL-RTHDGQFTIM---QLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCK 191
Query: 728 VADFGL---VKNAPDGKYS 743
V+DFGL +++ PD Y+
Sbjct: 192 VSDFGLSRVLEDDPDAAYT 210
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 18/162 (11%)
Query: 607 KIAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGT 665
K+A+K + + + + EI+ L +RH H++ L ++ ++V EY G
Sbjct: 36 KVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAG-GE 94
Query: 666 LAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR 725
L ++ E +T + + +EY H + +HRDLKP N+L+ D++
Sbjct: 95 LFDYIVEK-----KRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLN 146
Query: 726 AKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE------YAG 761
K+ADFGL DG + + G+ Y APE YAG
Sbjct: 147 VKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVINGKLYAG 186
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 80/159 (50%), Gaps = 11/159 (6%)
Query: 607 KIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPRGT 665
K+AVK ++S ++ +E+ +++ + +H ++V LLG C +G L++ EY G
Sbjct: 70 KVAVKMLKSTAHADEK-EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 128
Query: 666 LAQHL-----FEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
L L + PL + + + VA+G+ +L A ++ IHRD+ N+L+
Sbjct: 129 LLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLL 185
Query: 721 GDDMRAKVADFGLVKNAP-DGKYSVETRLAGTFGYLAPE 758
+ AK+ DFGL ++ D Y V+ ++APE
Sbjct: 186 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPE 224
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 72/159 (45%), Gaps = 15/159 (9%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLG--YCINGSERLLVYEYMP 662
G +AVK+++ + G +FQ EI +L + +V G Y E LV EY+P
Sbjct: 36 GALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLP 93
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G L L L + + + + +G+EYL S + +HRDL NIL+
Sbjct: 94 SGCLRDFL----QRHRARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVES 146
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAG---TFGYLAPE 758
+ K+ADFGL K P K R G F Y APE
Sbjct: 147 EAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY-APE 184
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 82/176 (46%), Gaps = 40/176 (22%)
Query: 604 DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663
DG +KR++ N + + E+ L K+ H ++V G C +G ++Y P
Sbjct: 35 DGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNG-CWDG------FDYDPE 81
Query: 664 -------GTLAQHLF---EWHDHGYTPLTWKQRVTIALD----------VARGVEYLHSL 703
+ + LF E+ D G ++R LD + +GV+Y+HS
Sbjct: 82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS- 140
Query: 704 AQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP-DGKYSVETRLAGTFGYLAPE 758
+ I+RDLKPSNI + D + K+ DFGLV + DGK R GT Y++PE
Sbjct: 141 --KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK---RXRSKGTLRYMSPE 191
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 10/132 (7%)
Query: 627 QAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQR 686
Q EI VL++ ++ G + GS+ ++ EY+ G+ L P Q
Sbjct: 69 QQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLL------RAGPFDEFQI 122
Query: 687 VTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVET 746
T+ ++ +G++YLHS + IHRD+K +N+L+ + K+ADFG+ D + T
Sbjct: 123 ATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT 179
Query: 747 RLAGTFGYLAPE 758
GT ++APE
Sbjct: 180 -FVGTPFWMAPE 190
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 10/132 (7%)
Query: 627 QAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQR 686
Q EI VL++ ++ G + ++ ++ EY+ G+ A L E PL Q
Sbjct: 73 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS-ALDLLE-----PGPLDETQI 126
Query: 687 VTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVET 746
TI ++ +G++YLHS + IHRD+K +N+L+ + K+ADFG+ D + T
Sbjct: 127 ATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 183
Query: 747 RLAGTFGYLAPE 758
GT ++APE
Sbjct: 184 -FVGTPFWMAPE 194
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 11/123 (8%)
Query: 625 EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWK 684
EF +E +++ + H +++ L G N +++ E+M G L L +D +T +
Sbjct: 61 EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL-RLNDGQFTVI--- 116
Query: 685 QRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK----NAPDG 740
Q V + +A G+ YL A+ S++HRDL NIL+ ++ KV+DFGL + N+ D
Sbjct: 117 QLVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDP 173
Query: 741 KYS 743
Y+
Sbjct: 174 TYT 176
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 19/155 (12%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
EI++ + H+H+V G+ + +V E R + L E H LT +
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR----RSLLELHKRRKA-LTEPEARY 125
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV-KNAPDGKYSVETR 747
+ G +YLH + IHRDLK N+ + +D+ K+ DFGL K DG+ +
Sbjct: 126 YLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKT 180
Query: 748 LAGTFGYLAPEYAGKH--------WMILCQMTGLI 774
L GT Y+APE K W I C M L+
Sbjct: 181 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL 215
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 80/159 (50%), Gaps = 11/159 (6%)
Query: 607 KIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPRGT 665
K+AVK ++S ++ +E+ +++ + +H ++V LLG C +G L++ EY G
Sbjct: 78 KVAVKMLKSTAHADEK-EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 666 LAQHL-----FEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
L L + PL + + + VA+G+ +L A ++ IHRD+ N+L+
Sbjct: 137 LLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLL 193
Query: 721 GDDMRAKVADFGLVKN-APDGKYSVETRLAGTFGYLAPE 758
+ AK+ DFGL ++ D Y V+ ++APE
Sbjct: 194 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPE 232
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 21/156 (13%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
EI++ + H+H+V G+ + +V E R + L E H LT +
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR----RSLLELHKRRKA-LTEPEARY 145
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETR- 747
+ G +YLH + IHRDLK N+ + +D+ K+ DFGL +Y E +
Sbjct: 146 YLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV---EYDGERKK 199
Query: 748 -LAGTFGYLAPEYAGKH--------WMILCQMTGLI 774
L GT Y+APE K W I C M L+
Sbjct: 200 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL 235
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 12/161 (7%)
Query: 601 ELPDGTKIAVKRMES-NTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV-Y 658
EL + A+K +E + + + E V++++ H V L +C E+L
Sbjct: 58 ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FCFQDDEKLYFGL 116
Query: 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
Y G L +++ + T + ++ +EYLH + IHRDLKP NI
Sbjct: 117 SYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHG---KGIIHRDLKPENI 168
Query: 719 LIGDDMRAKVADFGLVKN-APDGKYSVETRLAGTFGYLAPE 758
L+ +DM ++ DFG K +P+ K + GT Y++PE
Sbjct: 169 LLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 209
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 21/156 (13%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
EI++ + H+H+V G+ + +V E R + L E H LT +
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR----RSLLELHKRRKA-LTEPEARY 143
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETR- 747
+ G +YLH + IHRDLK N+ + +D+ K+ DFGL A +Y E +
Sbjct: 144 YLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGL---ATKVEYDGERKK 197
Query: 748 -LAGTFGYLAPEYAGKH--------WMILCQMTGLI 774
L GT Y+APE K W I C M L+
Sbjct: 198 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL 233
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
E +L+ V H ++ + G + + ++ +Y+ G L ++ L QR
Sbjct: 56 ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL-----------FSLLRKSQRFP 104
Query: 689 ------IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A +V +EYLHS + I+RDLKP NIL+ + K+ DFG K PD Y
Sbjct: 105 NPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY 161
Query: 743 SVETRLAGTFGYLAPE 758
L GT Y+APE
Sbjct: 162 X----LCGTPDYIAPE 173
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 7/111 (6%)
Query: 625 EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWK 684
EF +E +++ + H +++ L G N +++ E+M G L L +D +T +
Sbjct: 63 EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL-RLNDGQFTVI--- 118
Query: 685 QRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735
Q V + +A G+ YL A+ S++HRDL NIL+ ++ KV+DFGL +
Sbjct: 119 QLVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSR 166
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 19/155 (12%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
EI++ + H+H+V G+ + +V E R + L E H LT +
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR----RSLLELHKRRKA-LTEPEARY 121
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV-KNAPDGKYSVETR 747
+ G +YLH + IHRDLK N+ + +D+ K+ DFGL K DG+ +
Sbjct: 122 YLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKT 176
Query: 748 LAGTFGYLAPEYAGKH--------WMILCQMTGLI 774
L GT Y+APE K W I C M L+
Sbjct: 177 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL 211
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 19/155 (12%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
EI++ + H+H+V G+ + +V E R + L E H LT +
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR----RSLLELHKRRKA-LTEPEARY 121
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV-KNAPDGKYSVETR 747
+ G +YLH + IHRDLK N+ + +D+ K+ DFGL K DG+ +
Sbjct: 122 YLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKT 176
Query: 748 LAGTFGYLAPEYAGKH--------WMILCQMTGLI 774
L GT Y+APE K W I C M L+
Sbjct: 177 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL 211
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 13/148 (8%)
Query: 601 ELPDGTKIAVKRMESNTMG--NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658
+LP +I+V +++ +G K +F E +++ + H +++ L G ++V
Sbjct: 38 KLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 96
Query: 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
E M G+L L + HD +T + Q V + +A G++YL + ++HRDL NI
Sbjct: 97 EXMENGSLDSFLRK-HDAQFTVI---QLVGMLRGIASGMKYLSDMG---YVHRDLAARNI 149
Query: 719 LIGDDMRAKVADFGL---VKNAPDGKYS 743
LI ++ KV+DFGL +++ P+ Y+
Sbjct: 150 LINSNLVCKVSDFGLSRVLEDDPEAAYT 177
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 17/165 (10%)
Query: 607 KIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPRGT 665
K+AVK ++S ++ +E+ +++ + +H ++V LLG C +G L++ EY G
Sbjct: 78 KVAVKMLKSTAHADEK-EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 666 LAQHLFEWH----DHGYTP-------LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLK 714
L L ++ Y P L+ + + + VA+G+ +L A ++ IHRD+
Sbjct: 137 LLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVA 193
Query: 715 PSNILIGDDMRAKVADFGLVKN-APDGKYSVETRLAGTFGYLAPE 758
N+L+ + AK+ DFGL ++ D Y V+ ++APE
Sbjct: 194 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPE 238
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 10/132 (7%)
Query: 627 QAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQR 686
Q EI VL++ ++ G + ++ ++ EY+ G+ A L E PL Q
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS-ALDLLE-----PGPLDETQI 106
Query: 687 VTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVET 746
TI ++ +G++YLHS + IHRD+K +N+L+ + K+ADFG+ D + T
Sbjct: 107 ATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 163
Query: 747 RLAGTFGYLAPE 758
GT ++APE
Sbjct: 164 -FVGTPFWMAPE 174
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L++
Sbjct: 38 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM 96
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 97 -QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 146
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFGL K A + +Y E
Sbjct: 147 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 178
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K +++ K +F E ++ + H +++ L G +++ EYM G L
Sbjct: 76 VAIKTLKAGYT-EKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALD 134
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+ L E D ++ L Q V + +A G++YL A +++HRDL NIL+ ++ K
Sbjct: 135 KFLRE-KDGEFSVL---QLVGMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCK 187
Query: 728 VADFGL---VKNAPDGKYS 743
V+DFGL +++ P+ Y+
Sbjct: 188 VSDFGLSRVLEDDPEATYT 206
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L++
Sbjct: 44 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM 102
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 103 -QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 152
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFGL K A + +Y E
Sbjct: 153 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 10/153 (6%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K +++ + +F +E +++ + H +++ L G G ++V EYM G+L
Sbjct: 80 VAIKALKAGYT-ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
L HD +T + Q V + V G+ YL L ++HRDL N+L+ ++ K
Sbjct: 139 TFL-RTHDGQFTIM---QLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCK 191
Query: 728 VADFGLVKNAPDGKYSVETRLAGT--FGYLAPE 758
V+DFGL + D + T G + APE
Sbjct: 192 VSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPE 224
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L++
Sbjct: 41 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM 99
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 100 -QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 149
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFGL K A + +Y E
Sbjct: 150 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 181
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L++
Sbjct: 37 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM 95
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 96 -QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 145
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFGL K A + +Y E
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L++
Sbjct: 39 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM 97
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 98 -QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 147
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFGL K A + +Y E
Sbjct: 148 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 179
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L++
Sbjct: 40 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM 98
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 99 -QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 148
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFGL K A + +Y E
Sbjct: 149 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 34/181 (18%)
Query: 603 PDGTKIAVKRMESNTMGNKGLSEFQA-------EIAVLTKVR-HRHLVALLGYCINGSER 654
P + AVK ++ G+ E Q E+ +L KV H +++ L +
Sbjct: 27 PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFF 86
Query: 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGV-----EYLHSLAQQSFI 709
LV++ M +G L +L E +VT++ R + E + +L + + +
Sbjct: 87 FLVFDLMKKGELFDYLTE-------------KVTLSEKETRKIMRALLEVICALHKLNIV 133
Query: 710 HRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQ 769
HRDLKP NIL+ DDM K+ DFG G+ E + GT YLAPE +I C
Sbjct: 134 HRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE--VCGTPSYLAPE------IIECS 185
Query: 770 M 770
M
Sbjct: 186 M 186
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L++
Sbjct: 38 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM 96
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 97 -QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 146
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFGL K A + +Y E
Sbjct: 147 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 178
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 75/171 (43%), Gaps = 23/171 (13%)
Query: 601 ELPDGTKIAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659
+L D +AVK + ++ + F+ E + H +VA+ Y +E
Sbjct: 33 DLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAE------ 84
Query: 660 YMPRGTLAQHLFEWHD--------HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHR 711
P G L + E+ D H P+T K+ + + D + + + H Q IHR
Sbjct: 85 -TPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHR 140
Query: 712 DLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLA--GTFGYLAPEYA 760
D+KP+NILI KV DFG+ + D SV A GT YL+PE A
Sbjct: 141 DVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQA 191
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G ++AVK ++ + + L + E+ ++ + H ++V L LV EY G
Sbjct: 32 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 91
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+ +L HG+ + K+ + V+Y H Q+ +HRDLK N+L+ DM
Sbjct: 92 EVFDYLVA---HGW--MKEKEARAKFRQIVSAVQYCH---QKFIVHRDLKAENLLLDADM 143
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE-YAGKHW 764
K+ADFG G ++T G+ Y APE + GK +
Sbjct: 144 NIKIADFGFSNEFTFGN-KLDT-FCGSPPYAAPELFQGKKY 182
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L+
Sbjct: 39 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT 97
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 98 -QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 147
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFGL K A + +Y E
Sbjct: 148 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 179
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L+
Sbjct: 44 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT 102
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 103 -QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 152
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFGL K A + +Y E
Sbjct: 153 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 21/156 (13%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
EI++ + H+H+V G+ + +V E R +L E H LT +
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL----LELHKRRKA-LTEPEARY 119
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETR- 747
+ G +YLH + IHRDLK N+ + +D+ K+ DFGL A +Y E +
Sbjct: 120 YLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGL---ATKVEYDGERKK 173
Query: 748 -LAGTFGYLAPEYAGKH--------WMILCQMTGLI 774
L GT Y+APE K W I C M L+
Sbjct: 174 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL 209
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 19/170 (11%)
Query: 608 IAVKRMESNTMGN-KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+AVK ++ + + + + +F E+ + + HR+L+ L G + ++ V E P G+L
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 107
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
L + H A+ VA G+ YL S + FIHRDL N+L+
Sbjct: 108 LDRLRKHQGH----FLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLV 160
Query: 727 KVADFGLVKNAP--DGKYSVETRLAGTFGYLAPE--------YAGKHWMI 766
K+ DFGL++ P D ++ F + APE +A WM
Sbjct: 161 KIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 210
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 19/170 (11%)
Query: 608 IAVKRMESNTMGN-KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+AVK ++ + + + + +F E+ + + HR+L+ L G + ++ V E P G+L
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSL 97
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
L + G+ L R A+ VA G+ YL S + FIHRDL N+L+
Sbjct: 98 LDRLRK--HQGHFLLGTLSRY--AVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLV 150
Query: 727 KVADFGLVKNAP--DGKYSVETRLAGTFGYLAPE--------YAGKHWMI 766
K+ DFGL++ P D ++ F + APE +A WM
Sbjct: 151 KIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 200
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 624 SEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTW 683
S + EIAVL K++H ++V L + + LV + + G L + E + T
Sbjct: 51 SSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVY-----TE 105
Query: 684 KQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI---GDDMRAKVADFGLVKNAPDG 740
K + V V+YLH + +HRDLKP N+L ++ + + DFGL K +G
Sbjct: 106 KDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG 162
Query: 741 KYSVETRLAGTFGYLAPE 758
+ + GT GY+APE
Sbjct: 163 ---IMSTACGTPGYVAPE 177
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L+
Sbjct: 47 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT 105
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 106 -QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 155
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFGL K A + +Y E
Sbjct: 156 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 187
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 13/148 (8%)
Query: 601 ELPDGTKIAVKRMESNTMG--NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658
+LP +I+V +++ +G K +F E +++ + H +++ L G ++V
Sbjct: 67 KLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125
Query: 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
E M G+L L + HD +T + Q V + +A G++YL + ++HRDL NI
Sbjct: 126 EXMENGSLDSFLRK-HDAQFTVI---QLVGMLRGIASGMKYLSDMG---YVHRDLAARNI 178
Query: 719 LIGDDMRAKVADFGL---VKNAPDGKYS 743
LI ++ KV+DFGL +++ P+ Y+
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDDPEAAYT 206
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L+
Sbjct: 37 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT 95
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 96 -QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 145
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFGL K A + +Y E
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 608 IAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K + + + +G+ + + EI + + H +++ L Y + L+ EY PRG L
Sbjct: 51 VALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGEL 110
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ L ++ TI ++A + Y H + IHRD+KP N+L+G
Sbjct: 111 YKEL-----QKSCTFDEQRTATIMEELADALMYCHG---KKVIHRDIKPENLLLGLKGEL 162
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ADFG +AP + + GT YL PE
Sbjct: 163 KIADFGWSVHAPSLRRKT---MCGTLDYLPPE 191
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L+
Sbjct: 62 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT 120
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 121 -QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 170
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFGL K A + +Y E
Sbjct: 171 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 202
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L+
Sbjct: 40 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT 98
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 99 -QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 148
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFGL K A + +Y E
Sbjct: 149 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L+
Sbjct: 37 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT 95
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 96 -QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 145
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFGL K A + +Y E
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L+
Sbjct: 44 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT 102
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 103 -QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 152
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFGL K A + +Y E
Sbjct: 153 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 184
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L+
Sbjct: 43 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT 101
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 102 -QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 151
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFGL K A + +Y E
Sbjct: 152 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 183
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L+
Sbjct: 40 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT 98
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 99 -QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 148
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFGL K A + +Y E
Sbjct: 149 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 34/181 (18%)
Query: 603 PDGTKIAVKRMESNTMGNKGLSEFQA-------EIAVLTKVR-HRHLVALLGYCINGSER 654
P + AVK ++ G+ E Q E+ +L KV H +++ L +
Sbjct: 40 PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFF 99
Query: 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGV-----EYLHSLAQQSFI 709
LV++ M +G L +L E +VT++ R + E + +L + + +
Sbjct: 100 FLVFDLMKKGELFDYLTE-------------KVTLSEKETRKIMRALLEVICALHKLNIV 146
Query: 710 HRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQ 769
HRDLKP NIL+ DDM K+ DFG G+ E + GT YLAPE +I C
Sbjct: 147 HRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE--VCGTPSYLAPE------IIECS 198
Query: 770 M 770
M
Sbjct: 199 M 199
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L+
Sbjct: 40 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT 98
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 99 -QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 148
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFGL K A + +Y E
Sbjct: 149 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 180
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 76/158 (48%), Gaps = 17/158 (10%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLL--VYEYMP 662
G +A+KR+ + S EI++L ++ H ++V+L+ + SER L V+E+M
Sbjct: 45 GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID--VIHSERCLTLVFEFME 102
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
+ L + D T L Q + RGV + H Q +HRDLKP N+LI
Sbjct: 103 KD-----LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINS 154
Query: 723 DMRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
D K+ADFGL + P Y+ E T Y AP+
Sbjct: 155 DGALKLADFGLARAFGIPVRSYTHEV---VTLWYRAPD 189
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 10/132 (7%)
Query: 627 QAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQR 686
Q EI VL++ ++ G + ++ ++ EY+ G+ A L E PL Q
Sbjct: 68 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS-ALDLLE-----PGPLDETQI 121
Query: 687 VTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVET 746
TI ++ +G++YLHS + IHRD+K +N+L+ + K+ADFG+ D +
Sbjct: 122 ATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RN 177
Query: 747 RLAGTFGYLAPE 758
GT ++APE
Sbjct: 178 XFVGTPFWMAPE 189
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L+
Sbjct: 37 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT 95
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 96 -QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 145
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFGL K A + +Y E
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L+
Sbjct: 37 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT 95
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 96 -QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 145
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFGL K A + +Y E
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 177
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L+
Sbjct: 31 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT 89
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 90 -QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 139
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFGL K A + +Y E
Sbjct: 140 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 171
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G ++A+++M K L EI V+ + ++ ++V L + G E +V EY+ G
Sbjct: 45 GQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGG 102
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+L + E T + Q + + + +E+LHS IHRD+K NIL+G D
Sbjct: 103 SLTDVVTE------TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDG 153
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGK 762
K+ DFG + S + + GT ++APE +
Sbjct: 154 SVKLTDFGFCAQITP-EQSKRSEMVGTPYWMAPEVVTR 190
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 76/158 (48%), Gaps = 17/158 (10%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLL--VYEYMP 662
G +A+KR+ + S EI++L ++ H ++V+L+ + SER L V+E+M
Sbjct: 45 GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID--VIHSERCLTLVFEFME 102
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
+ L + D T L Q + RGV + H Q +HRDLKP N+LI
Sbjct: 103 KD-----LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINS 154
Query: 723 DMRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
D K+ADFGL + P Y+ E T Y AP+
Sbjct: 155 DGALKLADFGLARAFGIPVRSYTHEV---VTLWYRAPD 189
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
E +L KV R +V+L ++ LV M G + H++ D + +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN-VDEDNPGFQEPRAIF 293
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRL 748
+ G+E+LH Q++ I+RDLKP N+L+ DD +++D GL G+ +
Sbjct: 294 YTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG-Y 349
Query: 749 AGTFGYLAPE 758
AGT G++APE
Sbjct: 350 AGTPGFMAPE 359
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
E +L KV R +V+L ++ LV M G + H++ D + +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN-VDEDNPGFQEPRAIF 293
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRL 748
+ G+E+LH Q++ I+RDLKP N+L+ DD +++D GL G+ +
Sbjct: 294 YTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG-Y 349
Query: 749 AGTFGYLAPE 758
AGT G++APE
Sbjct: 350 AGTPGFMAPE 359
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
E +L KV R +V+L ++ LV M G + H++ D + +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN-VDEDNPGFQEPRAIF 293
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRL 748
+ G+E+LH Q++ I+RDLKP N+L+ DD +++D GL G+ +
Sbjct: 294 YTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG-Y 349
Query: 749 AGTFGYLAPE 758
AGT G++APE
Sbjct: 350 AGTPGFMAPE 359
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
E +L KV R +V+L ++ LV M G + H++ D + +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN-VDEDNPGFQEPRAIF 293
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRL 748
+ G+E+LH Q++ I+RDLKP N+L+ DD +++D GL G+ +
Sbjct: 294 YTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG-Y 349
Query: 749 AGTFGYLAPE 758
AGT G++APE
Sbjct: 350 AGTPGFMAPE 359
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 55/130 (42%), Gaps = 12/130 (9%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
E +L V LV L + S +V EYMP G + HL +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL-----RRIGRFSEPHARF 145
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRL 748
A + EYLHSL I+RDLKP N+LI KVADFG K + L
Sbjct: 146 YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX----L 198
Query: 749 AGTFGYLAPE 758
GT YLAPE
Sbjct: 199 CGTPEYLAPE 208
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN-GSERL-LVYEYMP 662
G +AVK+++ + G +FQ EI +L + +V G G + L LV EY+P
Sbjct: 39 GALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP 96
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G L L L + + + + +G+EYL S + +HRDL NIL+
Sbjct: 97 SGCLRDFL----QRHRARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVES 149
Query: 723 DMRAKVADFGLVKNAP-DGKYSV--ETRLAGTFGYLAPE 758
+ K+ADFGL K P D Y V E + F Y APE
Sbjct: 150 EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APE 187
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 55/130 (42%), Gaps = 12/130 (9%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
E +L V LV L + S +V EYMP G + HL +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL-----RRIGRFSEPHARF 145
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRL 748
A + EYLHSL I+RDLKP N+LI KVADFG K + L
Sbjct: 146 YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX----L 198
Query: 749 AGTFGYLAPE 758
GT YLAPE
Sbjct: 199 CGTPEYLAPE 208
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 11/161 (6%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G ++AVK ++ + + L + E+ ++ + H ++V L LV EY G
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+ +L HG + K+ + V+Y H Q+ +HRDLK N+L+ DM
Sbjct: 99 EVFDYLVA---HG--RMKEKEARAKFRQIVSAVQYCH---QKFIVHRDLKAENLLLDADM 150
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE-YAGKHW 764
K+ADFG G ++T G+ Y APE + GK +
Sbjct: 151 NIKIADFGFSNEFTFGN-KLDT-FCGSPPYAAPELFQGKKY 189
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 11/161 (6%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G ++AVK ++ + + L + E+ ++ + H ++V L LV EY G
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+ +L HG + K+ + V+Y H Q+ +HRDLK N+L+ DM
Sbjct: 99 EVFDYLVA---HG--RMKEKEARAKFRQIVSAVQYCH---QKFIVHRDLKAENLLLDADM 150
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE-YAGKHW 764
K+ADFG G ++T G+ Y APE + GK +
Sbjct: 151 NIKIADFGFSNEFTFGN-KLDT-FCGSPPYAAPELFQGKKY 189
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
E+ VL + ++V G + E + E+M G+L Q L G P +V+
Sbjct: 116 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVS 172
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRL 748
IA V +G+ YL + +HRD+KPSNIL+ K+ DFG+ D S+
Sbjct: 173 IA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSF 225
Query: 749 AGTFGYLAPE-YAGKHWMILCQM--TGLIWLHGSVG 781
GT Y++PE G H+ + + GL + +VG
Sbjct: 226 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN-GSERL-LVYEYMP 662
G +AVK+++ + G +FQ EI +L + +V G G + L LV EY+P
Sbjct: 52 GALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP 109
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G L L L + + + + +G+EYL S + +HRDL NIL+
Sbjct: 110 SGCLRDFL----QRHRARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVES 162
Query: 723 DMRAKVADFGLVKNAP-DGKYSV--ETRLAGTFGYLAPE 758
+ K+ADFGL K P D Y V E + F Y APE
Sbjct: 163 EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APE 200
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 10/132 (7%)
Query: 627 QAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQR 686
Q EI VL++ ++ G + ++ ++ EY+ G+ A L E PL Q
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS-ALDLLE-----PGPLDETQI 106
Query: 687 VTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVET 746
TI ++ +G++YLHS + IHRD+K +N+L+ + K+ADFG+ D +
Sbjct: 107 ATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RN 162
Query: 747 RLAGTFGYLAPE 758
GT ++APE
Sbjct: 163 XFVGTPFWMAPE 174
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
E+ VL + ++V G + E + E+M G+L Q L E P +V+
Sbjct: 64 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAK---RIPEEILGKVS 120
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRL 748
IA V RG+ YL + +HRD+KPSNIL+ K+ DFG+ D S+
Sbjct: 121 IA--VLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSF 173
Query: 749 AGTFGYLAPE-YAGKHWMI 766
GT Y+APE G H+ +
Sbjct: 174 VGTRSYMAPERLQGTHYSV 192
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN-GSERL-LVYEYMP 662
G +AVK+++ + G +FQ EI +L + +V G G + L LV EY+P
Sbjct: 40 GALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP 97
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G L L L + + + + +G+EYL S + +HRDL NIL+
Sbjct: 98 SGCLRDFL----QRHRARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVES 150
Query: 723 DMRAKVADFGLVKNAPDGK--YSVETRLAGTFGYLAPE 758
+ K+ADFGL K P K Y V + APE
Sbjct: 151 EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 188
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 17/143 (11%)
Query: 602 LPDGTKIAVKRMESNTMGNKGLSEFQA---EIAVLTKVRHRHLVALLGYCINGSERLLVY 658
+P+G I + G FQA + + + H H+V LLG C GS LV
Sbjct: 53 IPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVT 111
Query: 659 EYMPRGTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+Y+P G+L H+ + H P L W + +A+G+ YL + +HR+L
Sbjct: 112 QYLPLGSLLDHVRQ-HRGALGPQLLLNW------GVQIAKGMYYLE---EHGMVHRNLAA 161
Query: 716 SNILIGDDMRAKVADFGLVKNAP 738
N+L+ + +VADFG+ P
Sbjct: 162 RNVLLKSPSQVQVADFGVADLLP 184
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 17/164 (10%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G ++AVK ++ + L + E+ ++ + H ++V L LV EY G
Sbjct: 40 GREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGG 99
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+ +L HG + K+ + V+Y H Q+ +HRDLK N+L+ DM
Sbjct: 100 EVFDYLVA---HG--RMKEKEARAKFRQIVSAVQYCH---QKYIVHRDLKAENLLLDGDM 151
Query: 725 RAKVADFGLVKNAPDGKYSVETRL---AGTFGYLAPE-YAGKHW 764
K+ADFG +++V +L G+ Y APE + GK +
Sbjct: 152 NIKIADFGF-----SNEFTVGNKLDTFCGSPPYAAPELFQGKKY 190
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 72/132 (54%), Gaps = 8/132 (6%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K ++S K +F +E +++ + H +++ L G + +++ E+M G+L
Sbjct: 64 VAIKTLKSGYT-EKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 122
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
L + +D +T + Q V + +A G++YL A +++HRDL NIL+ ++ K
Sbjct: 123 SFLRQ-NDGQFTVI---QLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCK 175
Query: 728 VADFGLVKNAPD 739
V+DFGL + D
Sbjct: 176 VSDFGLSRFLED 187
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +AVK+M+ + L E+ ++ +H ++V + + G E +V E++ G
Sbjct: 56 GKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 113
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
L + +T + +Q + L V + + LH+ Q IHRD+K +IL+ D
Sbjct: 114 ALTDIV------THTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDG 164
Query: 725 RAKVADFGLV----KNAPDGKYSVETRLAGTFGYLAPEYAGK 762
R K++DFG K P K L GT ++APE +
Sbjct: 165 RVKLSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPELISR 201
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 17/143 (11%)
Query: 602 LPDGTKIAVKRMESNTMGNKGLSEFQA---EIAVLTKVRHRHLVALLGYCINGSERLLVY 658
+P+G I + G FQA + + + H H+V LLG C GS LV
Sbjct: 35 IPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVT 93
Query: 659 EYMPRGTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+Y+P G+L H+ + H P L W + +A+G+ YL + +HR+L
Sbjct: 94 QYLPLGSLLDHVRQ-HRGALGPQLLLNW------GVQIAKGMYYLE---EHGMVHRNLAA 143
Query: 716 SNILIGDDMRAKVADFGLVKNAP 738
N+L+ + +VADFG+ P
Sbjct: 144 RNVLLKSPSQVQVADFGVADLLP 166
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +AVK+M+ + L E+ ++ +H ++V + + G E +V E++ G
Sbjct: 45 GKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 102
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
L + +T + +Q + L V + + LH+ Q IHRD+K +IL+ D
Sbjct: 103 ALTDIV------THTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDG 153
Query: 725 RAKVADFGLV----KNAPDGKYSVETRLAGTFGYLAPEYAGK 762
R K++DFG K P K L GT ++APE +
Sbjct: 154 RVKLSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPELISR 190
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +AVK+M+ + L E+ ++ +H ++V + + G E +V E++ G
Sbjct: 54 GKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 111
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
L + +T + +Q + L V + + LH+ Q IHRD+K +IL+ D
Sbjct: 112 ALTDIV------THTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDG 162
Query: 725 RAKVADFGLV----KNAPDGKYSVETRLAGTFGYLAPEYAGK 762
R K++DFG K P K L GT ++APE +
Sbjct: 163 RVKLSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPELISR 199
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +AVK+M+ + L E+ ++ +H ++V + + G E +V E++ G
Sbjct: 49 GKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 106
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
L + +T + +Q + L V + + LH+ Q IHRD+K +IL+ D
Sbjct: 107 ALTDIV------THTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDG 157
Query: 725 RAKVADFGLV----KNAPDGKYSVETRLAGTFGYLAPEYAGK 762
R K++DFG K P K L GT ++APE +
Sbjct: 158 RVKLSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPELISR 194
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 75/171 (43%), Gaps = 23/171 (13%)
Query: 601 ELPDGTKIAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659
+L D +AVK + ++ + F+ E + H +VA+ Y +E
Sbjct: 33 DLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAE------ 84
Query: 660 YMPRGTLAQHLFEWHD--------HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHR 711
P G L + E+ D H P+T K+ + + D + + + H Q IHR
Sbjct: 85 -TPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHR 140
Query: 712 DLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLA--GTFGYLAPEYA 760
D+KP+NI+I KV DFG+ + D SV A GT YL+PE A
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 75/171 (43%), Gaps = 23/171 (13%)
Query: 601 ELPDGTKIAVKRMESNTMGNKGLS-EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659
+L D +AVK + ++ + F+ E + H +VA+ Y +E
Sbjct: 33 DLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YDTGEAE------ 84
Query: 660 YMPRGTLAQHLFEWHD--------HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHR 711
P G L + E+ D H P+T K+ + + D + + + H Q IHR
Sbjct: 85 -TPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHR 140
Query: 712 DLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLA--GTFGYLAPEYA 760
D+KP+NI+I KV DFG+ + D SV A GT YL+PE A
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 603 PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
P ++AVK + L +F E +++K+ H+++V +G + R ++ E M
Sbjct: 73 PSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMA 131
Query: 663 RGTLAQHLFEWHDHGYTP--LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
G L L E P L + +A D+A G +YL + FIHRD+ N L+
Sbjct: 132 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLL 188
Query: 721 ---GDDMRAKVADFGLVKNAPDGKY 742
G AK+ DFG+ ++ Y
Sbjct: 189 TCPGPGRVAKIGDFGMARDIYRASY 213
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G ++A+++M K L EI V+ + ++ ++V L + G E +V EY+ G
Sbjct: 45 GQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGG 102
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+L + E T + Q + + + +E+LHS IHRD+K NIL+G D
Sbjct: 103 SLTDVVTE------TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDG 153
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGK 762
K+ DFG + S + + GT ++APE +
Sbjct: 154 SVKLTDFGFCAQITP-EQSKRSXMVGTPYWMAPEVVTR 190
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 69/148 (46%), Gaps = 4/148 (2%)
Query: 106 IPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSL 165
I +L T+L + L N S+P G FD LTNL+ L L +N L P K T+L
Sbjct: 78 ISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVEN-QLQSLP-DGVFDKLTNL 135
Query: 166 TTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAK-SDIQNLWMNDQQLGL 224
T L + + + L FD +NL L LSYN F K + +++L + QL
Sbjct: 136 TYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK- 194
Query: 225 SGTLDVLSGMTQLRQVWLHKNQFTGPIP 252
S V +T L+ +WLH N + P
Sbjct: 195 SVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 63 DNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPS--LANATSLQDIYL 120
D +T ++LA + L LT L L N + ++P T L+D+ L
Sbjct: 130 DKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDKLTQLKDLRL 188
Query: 121 DNNNFTSVPTGCFDGLTNLQVLSLSDNP 148
N SVP G FD LT+LQ + L DNP
Sbjct: 189 YQNQLKSVPDGVFDRLTSLQYIWLHDNP 216
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 11/161 (6%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G ++AV+ ++ + + L + E+ ++ + H ++V L LV EY G
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+ +L HG + K+ + V+Y H Q+ +HRDLK N+L+ DM
Sbjct: 99 EVFDYLVA---HG--RMKEKEARAKFRQIVSAVQYCH---QKFIVHRDLKAENLLLDADM 150
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE-YAGKHW 764
K+ADFG G E G+ Y APE + GK +
Sbjct: 151 NIKIADFGFSNEFTFGNKLDE--FCGSPPYAAPELFQGKKY 189
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L+
Sbjct: 34 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT 92
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A G+ YL + +HRDL
Sbjct: 93 -QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAEGMNYLED---RRLVHRDLAA 142
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFGL K A + +Y E
Sbjct: 143 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 174
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 603 PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
P ++AVK + L +F E +++K+ H+++V +G + R ++ E M
Sbjct: 59 PSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMA 117
Query: 663 RGTLAQHLFEWHDHGYTP--LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
G L L E P L + +A D+A G +YL + FIHRD+ N L+
Sbjct: 118 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLL 174
Query: 721 ---GDDMRAKVADFGLVKNAPDGKY 742
G AK+ DFG+ ++ Y
Sbjct: 175 TCPGPGRVAKIGDFGMARDIYRASY 199
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G ++A+++M K L EI V+ + ++ ++V L + G E +V EY+ G
Sbjct: 45 GQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGG 102
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+L + E T + Q + + + +E+LHS IHRD+K NIL+G D
Sbjct: 103 SLTDVVTE------TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDG 153
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGK 762
K+ DFG + S + + GT ++APE +
Sbjct: 154 SVKLTDFGFCAQITP-EQSKRSTMVGTPYWMAPEVVTR 190
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G ++A+++M K L EI V+ + ++ ++V L + G E +V EY+ G
Sbjct: 46 GQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGG 103
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+L + E T + Q + + + +E+LHS IHRD+K NIL+G D
Sbjct: 104 SLTDVVTE------TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDG 154
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGK 762
K+ DFG + S + + GT ++APE +
Sbjct: 155 SVKLTDFGFCAQITPEQ-SKRSXMVGTPYWMAPEVVTR 191
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 13/148 (8%)
Query: 601 ELPDGTKIAVKRMESNTMG--NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658
+LP +I+V +++ +G K +F E +++ + H +++ L G ++V
Sbjct: 67 KLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125
Query: 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
E M G+L L + HD +T + Q V + +A G++YL + +HRDL NI
Sbjct: 126 EXMENGSLDSFLRK-HDAQFTVI---QLVGMLRGIASGMKYLSDMGA---VHRDLAARNI 178
Query: 719 LIGDDMRAKVADFGL---VKNAPDGKYS 743
LI ++ KV+DFGL +++ P+ Y+
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDDPEAAYT 206
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
E+ VL + ++V G + E + E+M G+L Q L G P +V+
Sbjct: 81 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVS 137
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRL 748
IA V +G+ YL + +HRD+KPSNIL+ K+ DFG+ D S+
Sbjct: 138 IA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSF 190
Query: 749 AGTFGYLAPE-YAGKHWMILCQM--TGLIWLHGSVG 781
GT Y++PE G H+ + + GL + +VG
Sbjct: 191 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
E+ VL + ++V G + E + E+M G+L Q L G P +V+
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVS 110
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRL 748
IA V +G+ YL + +HRD+KPSNIL+ K+ DFG+ D S+
Sbjct: 111 IA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSF 163
Query: 749 AGTFGYLAPE-YAGKHWMI 766
GT Y++PE G H+ +
Sbjct: 164 VGTRSYMSPERLQGTHYSV 182
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
E+ VL + ++V G + E + E+M G+L Q L G P +V+
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVS 110
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRL 748
IA V +G+ YL + +HRD+KPSNIL+ K+ DFG+ D S+
Sbjct: 111 IA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSF 163
Query: 749 AGTFGYLAPE-YAGKHWMI 766
GT Y++PE G H+ +
Sbjct: 164 VGTRSYMSPERLQGTHYSV 182
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
E+ VL + ++V G + E + E+M G+L Q L G P +V+
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVS 110
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRL 748
IA V +G+ YL + +HRD+KPSNIL+ K+ DFG+ D S+
Sbjct: 111 IA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSF 163
Query: 749 AGTFGYLAPE-YAGKHWMI 766
GT Y++PE G H+ +
Sbjct: 164 VGTRSYMSPERLQGTHYSV 182
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 11/161 (6%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G ++AV+ ++ + + L + E+ ++ + H ++V L LV EY G
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+ +L HG + K+ + V+Y H Q+ +HRDLK N+L+ DM
Sbjct: 99 EVFDYLVA---HG--RMKEKEARAKFRQIVSAVQYCH---QKFIVHRDLKAENLLLDADM 150
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE-YAGKHW 764
K+ADFG G ++T G+ Y APE + GK +
Sbjct: 151 NIKIADFGFSNEFTFGN-KLDT-FCGSPPYAAPELFQGKKY 189
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 78/153 (50%), Gaps = 10/153 (6%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K +++ +K +F +E +++ + H +++ L G +++ EYM G+L
Sbjct: 39 VAIKTLKAGYT-DKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLD 97
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
L + +D +T + Q V + + G++YL + S++HRDL NIL+ ++ K
Sbjct: 98 AFLRK-NDGRFTVI---QLVGMLRGIGSGMKYLSDM---SYVHRDLAARNILVNSNLVCK 150
Query: 728 VADFGLVKNAPDGKYSVETRLAGT--FGYLAPE 758
V+DFG+ + D + T G + APE
Sbjct: 151 VSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 183
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
E+ VL + ++V G + E + E+M G+L Q L G P +V+
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVS 110
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRL 748
IA V +G+ YL + +HRD+KPSNIL+ K+ DFG+ D S+
Sbjct: 111 IA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSF 163
Query: 749 AGTFGYLAPE-YAGKHWMI 766
GT Y++PE G H+ +
Sbjct: 164 VGTRSYMSPERLQGTHYSV 182
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 13/109 (11%)
Query: 662 PRGTLAQHLFEWHD--------HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDL 713
P G L + E+ D H P+T K+ + + D + + + H Q IHRD+
Sbjct: 86 PAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDV 142
Query: 714 KPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLA--GTFGYLAPEYA 760
KP+NI+I KV DFG+ + D SV A GT YL+PE A
Sbjct: 143 KPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +AVK+M+ + L E+ ++ +H ++V + + G E +V E++ G
Sbjct: 176 GKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 233
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
L + +T + +Q + L V + + LH+ Q IHRD+K +IL+ D
Sbjct: 234 ALTDIV------THTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDG 284
Query: 725 RAKVADFGLV----KNAPDGKYSVETRLAGTFGYLAPEYAGK 762
R K++DFG K P K L GT ++APE +
Sbjct: 285 RVKLSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPELISR 321
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 78/153 (50%), Gaps = 10/153 (6%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K +++ +K +F +E +++ + H +++ L G +++ EYM G+L
Sbjct: 45 VAIKTLKAGYT-DKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLD 103
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
L + +D +T + Q V + + G++YL + S++HRDL NIL+ ++ K
Sbjct: 104 AFLRK-NDGRFTVI---QLVGMLRGIGSGMKYLSDM---SYVHRDLAARNILVNSNLVCK 156
Query: 728 VADFGLVKNAPDGKYSVETRLAGT--FGYLAPE 758
V+DFG+ + D + T G + APE
Sbjct: 157 VSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 189
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 13/109 (11%)
Query: 662 PRGTLAQHLFEWHD--------HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDL 713
P G L + E+ D H P+T K+ + + D + + + H Q IHRD+
Sbjct: 86 PAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDV 142
Query: 714 KPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLA--GTFGYLAPEYA 760
KP+NI+I KV DFG+ + D SV A GT YL+PE A
Sbjct: 143 KPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 607 KIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCI--NGSERLLVYEYMPRG 664
+ A+K + S + + F E ++ + H +++AL+G + G +L+ YM G
Sbjct: 51 QCAIKSL-SRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL-PYMCHG 108
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
L Q + + T K ++ L VARG+EYL A+Q F+HRDL N ++ +
Sbjct: 109 DLLQFIRSPQRNP----TVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESF 161
Query: 725 RAKVADFGLVKNAPDGKY 742
KVADFGL ++ D +Y
Sbjct: 162 TVKVADFGLARDILDREY 179
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
E+ VL + ++V G + E + E+M G+L Q L G P +V+
Sbjct: 73 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVS 129
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRL 748
IA V +G+ YL + +HRD+KPSNIL+ K+ DFG+ D S+
Sbjct: 130 IA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSF 182
Query: 749 AGTFGYLAPE-YAGKHWMI 766
GT Y++PE G H+ +
Sbjct: 183 VGTRSYMSPERLQGTHYSV 201
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G ++AVK ++ + + L + E+ ++ + H ++V L LV EY G
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+ +L HG + K+ + V+Y H Q+ +HRDLK N+L+ DM
Sbjct: 99 EVFDYLVA---HG--RMKEKEARAKFRQIVSAVQYCH---QKFIVHRDLKAENLLLDADM 150
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFG---YLAPE-YAGKHW 764
K+ADFG +++ +L G Y APE + GK +
Sbjct: 151 NIKIADFGF-----SNEFTFGNKLDAFCGAPPYAAPELFQGKKY 189
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 603 PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
P ++AVK + L +F E +++K H+++V +G + R ++ E M
Sbjct: 73 PSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMA 131
Query: 663 RGTLAQHLFEWHDHGYTP--LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
G L L E P L + +A D+A G +YL + FIHRD+ N L+
Sbjct: 132 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLL 188
Query: 721 ---GDDMRAKVADFGLVKNAPDGKY 742
G AK+ DFG+ ++ Y
Sbjct: 189 TCPGPGRVAKIGDFGMARDIYRASY 213
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 603 PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
P ++AVK + L +F E +++K H+++V +G + R ++ E M
Sbjct: 58 PSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 116
Query: 663 RGTLAQHLFEWHDHGYTP--LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
G L L E P L + +A D+A G +YL + FIHRD+ N L+
Sbjct: 117 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLL 173
Query: 721 ---GDDMRAKVADFGLVKNAPDGKY 742
G AK+ DFG+ ++ Y
Sbjct: 174 TCPGPGRVAKIGDFGMARDIYRASY 198
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
E+ VL + ++V G + E + E+M G+L Q L G P +V+
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVS 110
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRL 748
IA V +G+ YL + +HRD+KPSNIL+ K+ DFG+ D S+
Sbjct: 111 IA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSF 163
Query: 749 AGTFGYLAPE-YAGKHWMILCQM--TGLIWLHGSVG 781
GT Y++PE G H+ + + GL + +VG
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 603 PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
P ++AVK + L +F E +++K H+++V +G + R ++ E M
Sbjct: 58 PSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMA 116
Query: 663 RGTLAQHLFEWHDHGYTP--LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
G L L E P L + +A D+A G +YL + FIHRD+ N L+
Sbjct: 117 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLL 173
Query: 721 ---GDDMRAKVADFGLVKNAPDGKY 742
G AK+ DFG+ ++ Y
Sbjct: 174 TCPGPGRVAKIGDFGMARDIYRASY 198
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 17/164 (10%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G ++A+K ++ + L + E+ ++ + H ++V L L+ EY G
Sbjct: 40 GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 99
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+ +L HG + K+ + + V+Y H Q+ +HRDLK N+L+ DM
Sbjct: 100 EVFDYLVA---HG--RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADM 151
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFG---YLAPE-YAGKHW 764
K+ADFG +++V +L G Y APE + GK +
Sbjct: 152 NIKIADFGF-----SNEFTVGGKLDAFCGAPPYAAPELFQGKKY 190
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 603 PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
P ++AVK + L +F E +++K H+++V +G + R ++ E M
Sbjct: 50 PSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 108
Query: 663 RGTLAQHLFEWHDHGYTP--LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
G L L E P L + +A D+A G +YL + FIHRD+ N L+
Sbjct: 109 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLL 165
Query: 721 ---GDDMRAKVADFGLVKNAPDGKY 742
G AK+ DFG+ ++ Y
Sbjct: 166 TCPGPGRVAKIGDFGMARDIYRASY 190
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 17/151 (11%)
Query: 602 LPDG--TKIAVKRME-SNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658
+P+G KI V ME K E E V+ V + H+ LLG C+ + +L+
Sbjct: 71 IPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT- 129
Query: 659 EYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPS 716
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 130 QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAAR 180
Query: 717 NILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFGL K A + +Y E
Sbjct: 181 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 211
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 603 PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
P ++AVK + L +F E +++K H+++V +G + R ++ E M
Sbjct: 75 PSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 133
Query: 663 RGTLAQHLFEWHDHGYTP--LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
G L L E P L + +A D+A G +YL + FIHRD+ N L+
Sbjct: 134 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLL 190
Query: 721 ---GDDMRAKVADFGLVKNAPDGKY 742
G AK+ DFG+ ++ Y
Sbjct: 191 TCPGPGRVAKIGDFGMARDIYRASY 215
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 603 PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
P ++AVK + L +F E +++K H+++V +G + R ++ E M
Sbjct: 59 PSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 117
Query: 663 RGTLAQHLFEWHDHGYTP--LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
G L L E P L + +A D+A G +YL + FIHRD+ N L+
Sbjct: 118 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLL 174
Query: 721 ---GDDMRAKVADFGLVKNAPDGKY 742
G AK+ DFG+ ++ Y
Sbjct: 175 TCPGPGRVAKIGDFGMARDIYRASY 199
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +AVK+M+ + L E+ ++ +H ++V + + G E +V E++ G
Sbjct: 99 GKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 156
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
L + +T + +Q + L V + + LH+ Q IHRD+K +IL+ D
Sbjct: 157 ALTDIV------THTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDG 207
Query: 725 RAKVADFGLV----KNAPDGKYSVETRLAGTFGYLAPEYAGK 762
R K++DFG K P K L GT ++APE +
Sbjct: 208 RVKLSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPELISR 244
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 603 PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
P ++AVK + L +F E +++K H+++V +G + R ++ E M
Sbjct: 65 PSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 123
Query: 663 RGTLAQHLFEWHDHGYTP--LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
G L L E P L + +A D+A G +YL + FIHRD+ N L+
Sbjct: 124 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLL 180
Query: 721 ---GDDMRAKVADFGLVKNAPDGKY 742
G AK+ DFG+ ++ Y
Sbjct: 181 TCPGPGRVAKIGDFGMARDIYRASY 205
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN-APDGKYSVETRLAG 750
++ +EYLH + IHRDLKP NIL+ +DM ++ DFG K +P+ K + G
Sbjct: 116 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 172
Query: 751 TFGYLAPE 758
T Y++PE
Sbjct: 173 TAQYVSPE 180
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 12/154 (7%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ + L E EI+++ + H+V G ++ +V EY G
Sbjct: 54 GQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAG 109
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+++ + + LT + TI +G+EYLH + + IHRD+K NIL+ +
Sbjct: 110 SVSD-IIRLRNKT---LTEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEG 162
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
AK+ADFG+ D + + GT ++APE
Sbjct: 163 HAKLADFGVAGQLTD-XMAKRNXVIGTPFWMAPE 195
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L++
Sbjct: 41 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM 99
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 100 -QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 149
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFG K A + +Y E
Sbjct: 150 RNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 181
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 13/109 (11%)
Query: 662 PRGTLAQHLFEWHD--------HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDL 713
P G L + E+ D H P+T K+ + + D + + + H Q IHRD+
Sbjct: 103 PAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDV 159
Query: 714 KPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLA--GTFGYLAPEYA 760
KP+NI+I KV DFG+ + D SV A GT YL+PE A
Sbjct: 160 KPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 208
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN-APDGKYSVETRLAG 750
++ +EYLH + IHRDLKP NIL+ +DM ++ DFG K +P+ K + G
Sbjct: 140 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 751 TFGYLAPE 758
T Y++PE
Sbjct: 197 TAQYVSPE 204
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN-APDGKYSVETRLAG 750
++ +EYLH + IHRDLKP NIL+ +DM ++ DFG K +P+ K + G
Sbjct: 138 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 751 TFGYLAPE 758
T Y++PE
Sbjct: 195 TAQYVSPE 202
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 603 PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
P ++AVK + L +F E +++K H+++V +G + R ++ E M
Sbjct: 99 PSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 157
Query: 663 RGTLAQHLFEWHDHGYTP--LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
G L L E P L + +A D+A G +YL + FIHRD+ N L+
Sbjct: 158 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLL 214
Query: 721 ---GDDMRAKVADFGLVKN 736
G AK+ DFG+ ++
Sbjct: 215 TCPGPGRVAKIGDFGMARD 233
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN-APDGKYSVETRLAG 750
++ +EYLH + IHRDLKP NIL+ +DM ++ DFG K +P+ K + G
Sbjct: 138 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 751 TFGYLAPE 758
T Y++PE
Sbjct: 195 TAQYVSPE 202
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN-APDGKYSVETRLAG 750
++ +EYLH + IHRDLKP NIL+ +DM ++ DFG K +P+ K + G
Sbjct: 122 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 178
Query: 751 TFGYLAPE 758
T Y++PE
Sbjct: 179 TAQYVSPE 186
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN-APDGKYSVETRLAG 750
++ +EYLH + IHRDLKP NIL+ +DM ++ DFG K +P+ K + G
Sbjct: 137 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 193
Query: 751 TFGYLAPE 758
T Y++PE
Sbjct: 194 TAQYVSPE 201
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN-APDGKYSVETRLAG 750
++ +EYLH + IHRDLKP NIL+ +DM ++ DFG K +P+ K + G
Sbjct: 115 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 171
Query: 751 TFGYLAPE 758
T Y++PE
Sbjct: 172 TAQYVSPE 179
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN-APDGKYSVETRLAG 750
++ +EYLH + IHRDLKP NIL+ +DM ++ DFG K +P+ K + G
Sbjct: 138 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 751 TFGYLAPE 758
T Y++PE
Sbjct: 195 TAQYVSPE 202
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN-APDGKYSVETRLAG 750
++ +EYLH + IHRDLKP NIL+ +DM ++ DFG K +P+ K + G
Sbjct: 118 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 174
Query: 751 TFGYLAPE 758
T Y++PE
Sbjct: 175 TAQYVSPE 182
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 34/181 (18%)
Query: 603 PDGTKIAVKRMESNTMGNKGLSEFQA-------EIAVLTKVR-HRHLVALLGYCINGSER 654
P + AVK ++ G+ E Q E+ +L KV H +++ L +
Sbjct: 40 PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFF 99
Query: 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGV-----EYLHSLAQQSFI 709
LV++ M +G L +L E +VT++ R + E + +L + + +
Sbjct: 100 FLVFDLMKKGELFDYLTE-------------KVTLSEKETRKIMRALLEVICALHKLNIV 146
Query: 710 HRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQ 769
HRDLKP NIL+ DDM K+ DFG G+ + GT YLAPE +I C
Sbjct: 147 HRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL--RSVCGTPSYLAPE------IIECS 198
Query: 770 M 770
M
Sbjct: 199 M 199
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN-APDGKYSVETRLAG 750
++ +EYLH + IHRDLKP NIL+ +DM ++ DFG K +P+ K + G
Sbjct: 140 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 751 TFGYLAPE 758
T Y++PE
Sbjct: 197 TAQYVSPE 204
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN-APDGKYSVETRLAG 750
++ +EYLH + IHRDLKP NIL+ +DM ++ DFG K +P+ K + G
Sbjct: 117 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 173
Query: 751 TFGYLAPE 758
T Y++PE
Sbjct: 174 TAQYVSPE 181
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN-APDGKYSVETRLAG 750
++ +EYLH + IHRDLKP NIL+ +DM ++ DFG K +P+ K + G
Sbjct: 137 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 193
Query: 751 TFGYLAPE 758
T Y++PE
Sbjct: 194 TAQYVSPE 201
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN-APDGKYSVETRLAG 750
++ +EYLH + IHRDLKP NIL+ +DM ++ DFG K +P+ K + G
Sbjct: 141 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 197
Query: 751 TFGYLAPE 758
T Y++PE
Sbjct: 198 TAQYVSPE 205
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L++
Sbjct: 39 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM 97
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 98 -QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 147
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFG K A + +Y E
Sbjct: 148 RNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN-APDGKYSVETRLAG 750
++ +EYLH + IHRDLKP NIL+ +DM ++ DFG K +P+ K + G
Sbjct: 140 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 196
Query: 751 TFGYLAPE 758
T Y++PE
Sbjct: 197 TAQYVSPE 204
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L++
Sbjct: 39 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM 97
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 98 -QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 147
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFG K A + +Y E
Sbjct: 148 RNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN-APDGKYSVETRLAG 750
++ +EYLH + IHRDLKP NIL+ +DM ++ DFG K +P+ K + G
Sbjct: 143 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 199
Query: 751 TFGYLAPE 758
T Y++PE
Sbjct: 200 TAQYVSPE 207
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN-APDGKYSVETRLAG 750
++ +EYLH + IHRDLKP NIL+ +DM ++ DFG K +P+ K + G
Sbjct: 140 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 751 TFGYLAPE 758
T Y++PE
Sbjct: 197 TAQYVSPE 204
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 57/136 (41%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+P G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI KVADFG K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 197 X----LCGTPEYLAPE 208
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 603 PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
P ++AVK + + +F E +++K H+++V +G + R ++ E M
Sbjct: 73 PSPLQVAVKTL-PEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 131
Query: 663 RGTLAQHLFEWHDHGYTP--LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
G L L E P L + +A D+A G +YL + FIHRD+ N L+
Sbjct: 132 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLL 188
Query: 721 ---GDDMRAKVADFGLVKNAPDGKY 742
G AK+ DFG+ ++ Y
Sbjct: 189 TCPGPGRVAKIGDFGMARDIYRASY 213
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 17/164 (10%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G ++A+K ++ + L + E+ ++ + H ++V L L+ EY G
Sbjct: 37 GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 96
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+ +L HG + K+ + + V+Y H Q+ +HRDLK N+L+ DM
Sbjct: 97 EVFDYLVA---HG--RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADM 148
Query: 725 RAKVADFGLVKNAPDGKYSVETRL---AGTFGYLAPE-YAGKHW 764
K+ADFG +++V +L G+ Y APE + GK +
Sbjct: 149 NIKIADFGF-----SNEFTVGGKLDTFCGSPPYAAPELFQGKKY 187
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 603 PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
P ++AVK + L +F E +++K H+++V +G + R ++ E M
Sbjct: 76 PSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 134
Query: 663 RGTLAQHLFEWHDHGYTP--LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
G L L E P L + +A D+A G +YL + FIHRD+ N L+
Sbjct: 135 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLL 191
Query: 721 ---GDDMRAKVADFGLVKN 736
G AK+ DFG+ ++
Sbjct: 192 TCPGPGRVAKIGDFGMARD 210
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN-APDGKYSVETRLAG 750
++ +EYLH + IHRDLKP NIL+ +DM ++ DFG K +P+ K + G
Sbjct: 141 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 197
Query: 751 TFGYLAPE 758
T Y++PE
Sbjct: 198 TAQYVSPE 205
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN-APDGKYSVETRLAG 750
++ +EYLH + IHRDLKP NIL+ +DM ++ DFG K +P+ K + G
Sbjct: 140 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 751 TFGYLAPE 758
T Y++PE
Sbjct: 197 TAQYVSPE 204
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN-APDGKYSVETRLAG 750
++ +EYLH + IHRDLKP NIL+ +DM ++ DFG K +P+ K + G
Sbjct: 138 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVG 194
Query: 751 TFGYLAPE 758
T Y++PE
Sbjct: 195 TAQYVSPE 202
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 603 PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
P ++AVK + L +F E +++K H+++V +G + R ++ E M
Sbjct: 59 PSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 117
Query: 663 RGTLAQHLFEWHDHGYTP--LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
G L L E P L + +A D+A G +YL + FIHRD+ N L+
Sbjct: 118 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLL 174
Query: 721 ---GDDMRAKVADFGLVKNAPDGKY 742
G AK+ DFG+ ++ Y
Sbjct: 175 TCPGPGRVAKIGDFGMAQDIYRASY 199
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN-APDGKYSVETRLAG 750
++ +EYLH + IHRDLKP NIL+ +DM ++ DFG K +P+ K + G
Sbjct: 140 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 751 TFGYLAPE 758
T Y++PE
Sbjct: 197 TAQYVSPE 204
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 20/162 (12%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G ++AVK M+ + L E+ ++ +H ++V + + G E ++ E++ G
Sbjct: 70 GRQVAVKMMDLRKQQRREL--LFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGG 127
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
L + + L +Q T+ V + + YLH+ Q IHRD+K +IL+ D
Sbjct: 128 ALTDIVSQ------VRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDG 178
Query: 725 RAKVADFGLV----KNAPDGKYSVETRLAGTFGYLAPEYAGK 762
R K++DFG K+ P K L GT ++APE +
Sbjct: 179 RVKLSDFGFCAQISKDVPKRKX-----LVGTPYWMAPEVISR 215
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 13/132 (9%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
EI++L +++H ++V L +LV+E++ + + L + + G +T K +
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAK---S 104
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK--NAPDGKYSVET 746
L + G+ Y H + +HRDLKP N+LI + K+ADFGL + P KY+ E
Sbjct: 105 FLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE- 160
Query: 747 RLAGTFGYLAPE 758
T Y AP+
Sbjct: 161 --VVTLWYRAPD 170
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 603 PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
P ++AVK + L +F E +++K H+++V +G + R ++ E M
Sbjct: 85 PSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 143
Query: 663 RGTLAQHLFEWHDHGYTP--LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
G L L E P L + +A D+A G +YL + FIHRD+ N L+
Sbjct: 144 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLL 200
Query: 721 ---GDDMRAKVADFGLVKNAPDGKY 742
G AK+ DFG+ ++ Y
Sbjct: 201 TCPGPGRVAKIGDFGMARDIYRASY 225
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 13/132 (9%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
EI++L +++H ++V L +LV+E++ + + L + + G +T K +
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAK---S 104
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK--NAPDGKYSVET 746
L + G+ Y H + +HRDLKP N+LI + K+ADFGL + P KY+ E
Sbjct: 105 FLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEV 161
Query: 747 RLAGTFGYLAPE 758
T Y AP+
Sbjct: 162 V---TLWYRAPD 170
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 83/179 (46%), Gaps = 31/179 (17%)
Query: 604 DGTKIAVKRMESNTMGNKGLS--EFQAEIAVLTKVRHRHLVALLGYCI--NGSERLL--- 656
D A+KR+ + N+ L+ + E+ L K+ H +V + N +E+L
Sbjct: 29 DDCNYAIKRIR---LPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS 85
Query: 657 --VYEYMP-RGTLAQHLFEWHDHGYTPLTWKQR---VTIALDVARGVEYLHSLAQQSFIH 710
VY Y+ + ++L +W + G + ++R + I L +A VE+LHS + +H
Sbjct: 86 PKVYLYIQMQLCRKENLKDWMN-GRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMH 141
Query: 711 RDLKPSNILIGDDMRAKVADFGLVKN-----------APDGKYSVETRLAGTFGYLAPE 758
RDLKPSNI D KV DFGLV P Y+ T GT Y++PE
Sbjct: 142 RDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPE 200
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L+
Sbjct: 37 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT 95
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 96 -QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 145
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFG K A + +Y E
Sbjct: 146 RNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 177
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 13/132 (9%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
EI++L +++H ++V L +LV+E++ + + L + + G +T K +
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAK---S 104
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK--NAPDGKYSVET 746
L + G+ Y H + +HRDLKP N+LI + K+ADFGL + P KY+ E
Sbjct: 105 FLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI 161
Query: 747 RLAGTFGYLAPE 758
T Y AP+
Sbjct: 162 V---TLWYRAPD 170
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L+
Sbjct: 39 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT 97
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 98 -QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 147
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFG K A + +Y E
Sbjct: 148 RNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 179
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+P+G K+ A+K + T K E E V+ V + H+ LLG C+ + +L+
Sbjct: 44 IPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT 102
Query: 658 YEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+ MP G L ++ E D+ L W + +A+G+ YL + +HRDL
Sbjct: 103 -QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLED---RRLVHRDLAA 152
Query: 716 SNILIGDDMRAKVADFGLVK--NAPDGKYSVE 745
N+L+ K+ DFG K A + +Y E
Sbjct: 153 RNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE 184
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 601 ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660
ELP +A+K ++ K +F E +++ + H +++ L G ++V EY
Sbjct: 50 ELP----VAIKTLKVGYT-EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEY 104
Query: 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
M G+L L + +D +T + Q V + ++ G++YL + ++HRDL NILI
Sbjct: 105 MENGSLDTFLKK-NDGQFTVI---QLVGMLRGISAGMKYLSDMG---YVHRDLAARNILI 157
Query: 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGT--FGYLAPE 758
++ KV+DFGL + D + T G + APE
Sbjct: 158 NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPE 197
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 23/174 (13%)
Query: 601 ELPDGTKIAVKRMESNTMGNKGLSEF------------QAEIAVLTKVRHRHLVALLGYC 648
EL G V R+ GN ++F + EI ++ +RH LV L
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 223
Query: 649 INGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSF 708
+ +E +++YE+M G L + + + H+ ++ + V V +G+ ++H + ++
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKVADEHNK----MSEDEAVEYMRQVCKGLCHMH---ENNY 276
Query: 709 IHRDLKPSNILIGDDM--RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYA 760
+H DLKP NI+ K+ DFGL + D K SV+ GT + APE A
Sbjct: 277 VHLDLKPENIMFTTKRSNELKLIDFGLTAHL-DPKQSVKV-TTGTAEFAAPEVA 328
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 60/132 (45%), Gaps = 13/132 (9%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
EI +L ++RH +LV LL C LV+E++ L E +G L ++
Sbjct: 74 EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDD--LELFPNG---LDYQVVQK 128
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN--APDGKYSVET 746
+ G+ + HS + IHRD+KP NIL+ K+ DFG + AP Y E
Sbjct: 129 YLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV 185
Query: 747 RLAGTFGYLAPE 758
T Y APE
Sbjct: 186 ---ATRWYRAPE 194
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 13/140 (9%)
Query: 621 KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHL-FEWHDHGYT 679
K + +AE +L +V+H +V L+ G + L+ EY+ G L L E T
Sbjct: 63 KDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDT 122
Query: 680 PLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA-P 738
+ +++AL +LH Q+ I+RDLKP NI++ K+ DFGL K +
Sbjct: 123 ACFYLAEISMALG------HLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH 173
Query: 739 DGKYSVETRLAGTFGYLAPE 758
DG +V GT Y+APE
Sbjct: 174 DG--TVTHXFCGTIEYMAPE 191
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
E+ VL + ++V G + E + E+M G+L Q L G P +V+
Sbjct: 57 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVS 113
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRL 748
IA V +G+ YL + +HRD+KPSNIL+ K+ DFG+ D +
Sbjct: 114 IA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---EMANEF 166
Query: 749 AGTFGYLAPE-YAGKHWMI 766
GT Y++PE G H+ +
Sbjct: 167 VGTRSYMSPERLQGTHYSV 185
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 15/163 (9%)
Query: 607 KIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPRGT 665
K+AVK ++S ++ +E+ +++ + +H ++V LLG C +G L++ EY G
Sbjct: 78 KVAVKMLKSTAHADEK-EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 666 LAQHLFEWH-----DHGY----TPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPS 716
L L D + + L+ + + + VA+G+ +L A ++ IHRD+
Sbjct: 137 LLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAAR 193
Query: 717 NILIGDDMRAKVADFGLVKN-APDGKYSVETRLAGTFGYLAPE 758
N+L+ + AK+ DFGL ++ D Y V+ ++APE
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPE 236
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 603 PD-GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEY 660
PD G A+K ++ T+ + + E +L V H +V L Y +L L+ ++
Sbjct: 53 PDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL-HYAFQTEGKLYLILDF 111
Query: 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIAL-DVARGVEYLHSLAQQSFIHRDLKPSNIL 719
+ G L L + ++ V L ++A G+++LHSL I+RDLKP NIL
Sbjct: 112 LRGGDLFTRL------SKEVMFTEEDVKFYLAELALGLDHLHSLG---IIYRDLKPENIL 162
Query: 720 IGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
+ ++ K+ DFGL K A D + + GT Y+APE
Sbjct: 163 LDEEGHIKLTDFGLSKEAIDHEKKAYS-FCGTVEYMAPE 200
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 13/140 (9%)
Query: 621 KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHL-FEWHDHGYT 679
K + +AE +L +V+H +V L+ G + L+ EY+ G L L E T
Sbjct: 63 KDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDT 122
Query: 680 PLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA-P 738
+ +++AL +LH Q+ I+RDLKP NI++ K+ DFGL K +
Sbjct: 123 ACFYLAEISMALG------HLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH 173
Query: 739 DGKYSVETRLAGTFGYLAPE 758
DG +V GT Y+APE
Sbjct: 174 DG--TVTHTFCGTIEYMAPE 191
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 78/177 (44%), Gaps = 36/177 (20%)
Query: 605 GTKIAVKRMESNTMGNKGLSEF----QAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660
G +AVKRM L +F EI +LT+ H + YC ++R L
Sbjct: 39 GRPVAVKRM---------LIDFCDIALMEIKLLTE-SDDHPNVIRYYCSETTDRFLYIAL 88
Query: 661 MPRGTLAQHLFEWHDHGYTPLTWKQR---VTIALDVARGVEYLHSLAQQSFIHRDLKPSN 717
Q L E + L ++ +++ +A GV +LHSL IHRDLKP N
Sbjct: 89 ELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQN 145
Query: 718 ILI-------------GDDMRAKVADFGLVKNAPDGKYSVETRL---AGTFGYLAPE 758
IL+ +++R ++DFGL K G+ S T L +GT G+ APE
Sbjct: 146 ILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPE 202
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 607 KIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPRGT 665
K+AVK ++S ++ +E+ +++ + +H ++V LLG C +G L++ EY G
Sbjct: 63 KVAVKMLKSTAHADEK-EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 121
Query: 666 LAQHLFEWHD------------------HGYTPLTWKQRVTIALDVARGVEYLHSLAQQS 707
L L + PL + + + VA+G+ +L A ++
Sbjct: 122 LLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKN 178
Query: 708 FIHRDLKPSNILIGDDMRAKVADFGLVKNAP-DGKYSVETRLAGTFGYLAPE 758
IHRD+ N+L+ + AK+ DFGL ++ D Y V+ ++APE
Sbjct: 179 CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPE 230
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 608 IAVKRMESN-TMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+AVK + + T+ NK +F +E ++ + H H+V L+G I ++ E P G L
Sbjct: 55 VAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGEL 111
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
H E + + LT V +L + + + YL S+ + +HRD+ NIL+
Sbjct: 112 G-HYLERNKNSLKVLT---LVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECV 164
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ DFGL + D Y + +++PE
Sbjct: 165 KLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 196
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 23/174 (13%)
Query: 601 ELPDGTKIAVKRMESNTMGNKGLSEF------------QAEIAVLTKVRHRHLVALLGYC 648
EL G V R+ GN ++F + EI ++ +RH LV L
Sbjct: 58 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 649 INGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSF 708
+ +E +++YE+M G L + + + H+ ++ + V V +G+ ++H + ++
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKVADEHNK----MSEDEAVEYMRQVCKGLCHMH---ENNY 170
Query: 709 IHRDLKPSNILIGDDM--RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYA 760
+H DLKP NI+ K+ DFGL + D K SV+ GT + APE A
Sbjct: 171 VHLDLKPENIMFTTKRSNELKLIDFGLTAHL-DPKQSVKV-TTGTAEFAAPEVA 222
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 606 TKIAVKRM---ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
++A+K++ E T + L E I +L + RH +++ IN R E M
Sbjct: 53 VRVAIKKISPFEHQTYCQRTLRE----IKILLRFRHENIIG-----INDIIRAPTIEQMK 103
Query: 663 RGTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
+ Q L E + L+ + RG++Y+HS + +HRDLKPSN+L
Sbjct: 104 DVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLL 160
Query: 720 IGDDMRAKVADFGLVKNA-PDGKYS-VETRLAGTFGYLAPE 758
+ K+ DFGL + A PD ++ T T Y APE
Sbjct: 161 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 608 IAVKRMESN-TMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+AVK + + T+ NK +F +E ++ + H H+V L+G I ++ E P G L
Sbjct: 43 VAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGEL 99
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
H E + + LT V +L + + + YL S+ + +HRD+ NIL+
Sbjct: 100 G-HYLERNKNSLKVLT---LVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECV 152
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ DFGL + D Y + +++PE
Sbjct: 153 KLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 184
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 608 IAVKRMESN-TMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+AVK + + T+ NK +F +E ++ + H H+V L+G I ++ E P G L
Sbjct: 39 VAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGEL 95
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
H E + + LT V +L + + + YL S+ + +HRD+ NIL+
Sbjct: 96 G-HYLERNKNSLKVLT---LVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECV 148
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ DFGL + D Y + +++PE
Sbjct: 149 KLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 180
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 606 TKIAVKRM---ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
++A+K++ E T + L E I +L + RH +++ IN R E M
Sbjct: 49 VRVAIKKISPFEHQTYCQRTLRE----IKILLRFRHENIIG-----INDIIRAPTIEQMK 99
Query: 663 RGTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
+ Q L E + L+ + RG++Y+HS + +HRDLKPSN+L
Sbjct: 100 DVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLL 156
Query: 720 IGDDMRAKVADFGLVKNA-PDGKYS-VETRLAGTFGYLAPE 758
+ K+ DFGL + A PD ++ T T Y APE
Sbjct: 157 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 16/89 (17%)
Query: 677 GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG-----DDMRAKVADF 731
G P+T Q+ T G+ +LHSL + +HRDLKP NILI ++A ++DF
Sbjct: 117 GLEPITLLQQTT------SGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDF 167
Query: 732 GLVKNAPDGKYSVETR--LAGTFGYLAPE 758
GL K G++S R + GT G++APE
Sbjct: 168 GLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 606 TKIAVKRM---ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
++A+K++ E T + L E I +L + RH +++ IN R E M
Sbjct: 57 VRVAIKKISPFEHQTYCQRTLRE----IKILLRFRHENIIG-----INDIIRAPTIEQMK 107
Query: 663 RGTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
+ Q L E + L+ + RG++Y+HS + +HRDLKPSN+L
Sbjct: 108 DVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLL 164
Query: 720 IGDDMRAKVADFGLVKNA-PDGKYS-VETRLAGTFGYLAPE 758
+ K+ DFGL + A PD ++ T T Y APE
Sbjct: 165 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 205
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 606 TKIAVKRM---ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
++A+K++ E T + L E I +L + RH +++ IN R E M
Sbjct: 49 VRVAIKKISPFEHQTYCQRTLRE----IKILLRFRHENIIG-----INDIIRAPTIEQMK 99
Query: 663 RGTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
+ Q L E + L+ + RG++Y+HS + +HRDLKPSN+L
Sbjct: 100 DVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLL 156
Query: 720 IGDDMRAKVADFGLVKNA-PDGKYS-VETRLAGTFGYLAPE 758
+ K+ DFGL + A PD ++ T T Y APE
Sbjct: 157 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 606 TKIAVKRM---ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
++A+K++ E T + L E I +L + RH +++ IN R E M
Sbjct: 54 VRVAIKKISPFEHQTYCQRTLRE----IKILLRFRHENIIG-----INDIIRAPTIEQMK 104
Query: 663 RGTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
+ Q L E + L+ + RG++Y+HS + +HRDLKPSN+L
Sbjct: 105 DVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLL 161
Query: 720 IGDDMRAKVADFGLVKNA-PDGKYS-VETRLAGTFGYLAPE 758
+ K+ DFGL + A PD ++ T T Y APE
Sbjct: 162 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 202
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 606 TKIAVKRM---ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
++A+K++ E T + L E I +L + RH +++ IN R E M
Sbjct: 55 VRVAIKKISPFEHQTYCQRTLRE----IKILLRFRHENIIG-----INDIIRAPTIEQMK 105
Query: 663 RGTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
+ Q L E + L+ + RG++Y+HS + +HRDLKPSN+L
Sbjct: 106 DVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLL 162
Query: 720 IGDDMRAKVADFGLVKNA-PDGKYS-VETRLAGTFGYLAPE 758
+ K+ DFGL + A PD ++ T T Y APE
Sbjct: 163 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 203
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 606 TKIAVKRM---ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
++A+K++ E T + L E I +L + RH +++ IN R E M
Sbjct: 46 VRVAIKKISPFEHQTYCQRTLRE----IKILLRFRHENIIG-----INDIIRAPTIEQMK 96
Query: 663 RGTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
+ Q L E + L+ + RG++Y+HS + +HRDLKPSN+L
Sbjct: 97 DVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLL 153
Query: 720 IGDDMRAKVADFGLVKNA-PDGKYS-VETRLAGTFGYLAPE 758
+ K+ DFGL + A PD ++ T T Y APE
Sbjct: 154 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 194
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 606 TKIAVKRM---ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
++A+K++ E T + L E I +L + RH +++ IN R E M
Sbjct: 53 VRVAIKKISPFEHQTYCQRTLRE----IKILLRFRHENIIG-----INDIIRAPTIEQMK 103
Query: 663 RGTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
+ Q L E + L+ + RG++Y+HS + +HRDLKPSN+L
Sbjct: 104 DVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLL 160
Query: 720 IGDDMRAKVADFGLVKNA-PDGKYS-VETRLAGTFGYLAPE 758
+ K+ DFGL + A PD ++ T T Y APE
Sbjct: 161 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCIN-GSERLLVYEYMPRGT 665
+AVK ++ ++ + +E+ +L + H ++V LLG C G +++ E+ G
Sbjct: 62 VAVKMLKEGATHSEHRA-LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 120
Query: 666 LAQHLFEWHDH--GYTP-------LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPS 716
L+ +L + Y P LT + + + VA+G+E+L A + IHRDL
Sbjct: 121 LSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAAR 177
Query: 717 NILIGDDMRAKVADFGLVKNA---PDGKYSVETRLAGTFGYLAPE 758
NIL+ + K+ DFGL ++ PD + RL ++APE
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP--LKWMAPE 220
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 606 TKIAVKRM---ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
++A+K++ E T + L E I +L + RH +++ IN R E M
Sbjct: 49 VRVAIKKISPFEHQTYCQRTLRE----IKILLRFRHENIIG-----INDIIRAPTIEQMK 99
Query: 663 RGTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
+ Q L E + L+ + RG++Y+HS + +HRDLKPSN+L
Sbjct: 100 DVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLL 156
Query: 720 IGDDMRAKVADFGLVKNA-PDGKYS-VETRLAGTFGYLAPE 758
+ K+ DFGL + A PD ++ T T Y APE
Sbjct: 157 LNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 606 TKIAVKRM---ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
++A+K++ E T + L E I +L + RH +++ IN R E M
Sbjct: 47 VRVAIKKISPFEHQTYCQRTLRE----IKILLRFRHENIIG-----INDIIRAPTIEQMK 97
Query: 663 RGTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
+ Q L E + L+ + RG++Y+HS + +HRDLKPSN+L
Sbjct: 98 DVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLL 154
Query: 720 IGDDMRAKVADFGLVKNA-PDGKYS-VETRLAGTFGYLAPE 758
+ K+ DFGL + A PD ++ T T Y APE
Sbjct: 155 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 606 TKIAVKRM---ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
++A+K++ E T + L E I +L + RH +++ IN R E M
Sbjct: 51 VRVAIKKISPFEHQTYCQRTLRE----IKILLRFRHENIIG-----INDIIRAPTIEQMK 101
Query: 663 RGTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
+ Q L E + L+ + RG++Y+HS + +HRDLKPSN+L
Sbjct: 102 DVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLL 158
Query: 720 IGDDMRAKVADFGLVKNA-PDGKYS-VETRLAGTFGYLAPE 758
+ K+ DFGL + A PD ++ T T Y APE
Sbjct: 159 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 606 TKIAVKRM---ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
++A+K++ E T + L E I +L + RH +++ IN R E M
Sbjct: 47 VRVAIKKISPFEHQTYCQRTLRE----IKILLRFRHENIIG-----INDIIRAPTIEQMK 97
Query: 663 RGTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
+ Q L E + L+ + RG++Y+HS + +HRDLKPSN+L
Sbjct: 98 DVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLL 154
Query: 720 IGDDMRAKVADFGLVKNA-PDGKYS-VETRLAGTFGYLAPE 758
+ K+ DFGL + A PD ++ T T Y APE
Sbjct: 155 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K +++ +K +F +E +++ + H +++ L G +++ EYM G+L
Sbjct: 60 VAIKTLKAGYT-DKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLD 118
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
L + +D +T + Q V + + G++YL + S +HRDL NIL+ ++ K
Sbjct: 119 AFLRK-NDGRFTVI---QLVGMLRGIGSGMKYLSDM---SAVHRDLAARNILVNSNLVCK 171
Query: 728 VADFGLVKNAPDGKYSVETRLAGT--FGYLAPE 758
V+DFG+ + D + T G + APE
Sbjct: 172 VSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 204
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 606 TKIAVKRM---ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
++A+K++ E T + L E I +L + RH +++ IN R E M
Sbjct: 53 VRVAIKKISPFEHQTYCQRTLRE----IKILLRFRHENIIG-----INDIIRAPTIEQMK 103
Query: 663 RGTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
+ Q L E + L+ + RG++Y+HS + +HRDLKPSN+L
Sbjct: 104 DVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLL 160
Query: 720 IGDDMRAKVADFGLVKNA-PDGKYS-VETRLAGTFGYLAPE 758
+ K+ DFGL + A PD ++ T T Y APE
Sbjct: 161 LNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 606 TKIAVKRM---ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
++A+K++ E T + L E I +L + RH +++ IN R E M
Sbjct: 53 VRVAIKKISPFEHQTYXQRTLRE----IKILLRFRHENIIG-----INDIIRAPTIEQMK 103
Query: 663 RGTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
+ Q L E + L+ + RG++Y+HS + +HRDLKPSN+L
Sbjct: 104 DVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLL 160
Query: 720 IGDDMRAKVADFGLVKNA-PDGKYS-VETRLAGTFGYLAPE 758
+ K+ DFGL + A PD ++ T T Y APE
Sbjct: 161 LNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G ++A+++M K L EI V+ + ++ ++V L + G E +V EY+ G
Sbjct: 46 GQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGG 103
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+L + E T + Q + + + +E+LHS IHR++K NIL+G D
Sbjct: 104 SLTDVVTE------TCMDEGQIAAVCRECLQALEFLHS---NQVIHRNIKSDNILLGMDG 154
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGK 762
K+ DFG + S + + GT ++APE +
Sbjct: 155 SVKLTDFGFCAQITPEQ-SKRSTMVGTPYWMAPEVVTR 191
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 606 TKIAVKRM---ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
++A+K++ E T + L E I +L + RH +++ IN R E M
Sbjct: 69 VRVAIKKISPFEHQTYCQRTLRE----IKILLRFRHENIIG-----INDIIRAPTIEQMK 119
Query: 663 RGTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
+ Q L E + L+ + RG++Y+HS + +HRDLKPSN+L
Sbjct: 120 DVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLL 176
Query: 720 IGDDMRAKVADFGLVKNA-PDGKYS-VETRLAGTFGYLAPE 758
+ K+ DFGL + A PD ++ T T Y APE
Sbjct: 177 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K ++S K +F +E +++ + H +++ L G + +++ E+M G+L
Sbjct: 38 VAIKTLKSGYT-EKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 96
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
L + +D +T + Q V + +A G++YL A +++HR L NIL+ ++ K
Sbjct: 97 SFLRQ-NDGQFTVI---QLVGMLRGIAAGMKYL---ADMNYVHRALAARNILVNSNLVCK 149
Query: 728 VADFGLVKNAPD 739
V+DFGL + D
Sbjct: 150 VSDFGLSRFLED 161
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 606 TKIAVKRM---ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
++A+K++ E T + L E I +L + RH +++ IN R E M
Sbjct: 49 VRVAIKKISPFEHQTYCQRTLRE----IKILLRFRHENIIG-----INDIIRAPTIEQMK 99
Query: 663 RGTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
+ Q L E + L+ + RG++Y+HS + +HRDLKPSN+L
Sbjct: 100 DVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLL 156
Query: 720 IGDDMRAKVADFGLVKNA-PDGKYS-VETRLAGTFGYLAPE 758
+ K+ DFGL + A PD ++ T T Y APE
Sbjct: 157 LNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 67/147 (45%), Gaps = 18/147 (12%)
Query: 624 SEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTW 683
+ EIA+ + + H+V G+ + +V E R + L E H +T
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRR----RSLLELHKRRKA-VTE 141
Query: 684 KQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV-KNAPDGKY 742
+ +GV+YLH+ IHRDLK N+ + DDM K+ DFGL K DG+
Sbjct: 142 PEARYFMRQTIQGVQYLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER 198
Query: 743 SVETRLAGTFGYLAPEYAGKHWMILCQ 769
+ L GT Y+APE +LC+
Sbjct: 199 KKD--LCGTPNYIAPE-------VLCK 216
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 76/158 (48%), Gaps = 17/158 (10%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRH----LVALLGYCINGSERLLVYEY 660
G IAVK+M + GNK E + + L V H +V G I ++ + E
Sbjct: 50 GHVIAVKQMRRS--GNK--EENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMEL 105
Query: 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
M GT A+ L + G P ++T+A + + + YL + IHRD+KPSNIL+
Sbjct: 106 M--GTCAEKL-KKRMQGPIPERILGKMTVA--IVKALYYLKE--KHGVIHRDVKPSNILL 158
Query: 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
+ + K+ DFG+ D K + R AG Y+APE
Sbjct: 159 DERGQIKLCDFGISGRLVDDK--AKDRSAGCAAYMAPE 194
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 78/172 (45%), Gaps = 24/172 (13%)
Query: 607 KIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPRGT 665
++AVK ++ ++ +E+ ++T++ H ++V LLG C L++EY G
Sbjct: 77 QVAVKMLKEKADSSER-EALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGD 135
Query: 666 LAQHL-----------FEWH-------DHGYTPLTWKQRVTIALDVARGVEYLHSLAQQS 707
L +L E+ + LT++ + A VA+G+E+L +S
Sbjct: 136 LLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KS 192
Query: 708 FIHRDLKPSNILIGDDMRAKVADFGLVKN-APDGKYSVETRLAGTFGYLAPE 758
+HRDL N+L+ K+ DFGL ++ D Y V ++APE
Sbjct: 193 CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPE 244
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 22/167 (13%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCIN-GSERLLVYEYMPRGT 665
+AVK ++ ++ + +E+ +L + H ++V LLG C G +++ E+ G
Sbjct: 60 VAVKMLKEGATHSEHRA-LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 118
Query: 666 LAQHLF----EWHDHGYTP-------LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLK 714
L+ +L E+ + P LT + + + VA+G+E+L A + IHRDL
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 175
Query: 715 PSNILIGDDMRAKVADFGLVKNA---PDGKYSVETRLAGTFGYLAPE 758
NIL+ + K+ DFGL ++ PD + RL ++APE
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP--LKWMAPE 220
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCIN-GSERLLVYEYMPRGT 665
+AVK ++ ++ + +E+ +L + H ++V LLG C G +++ E+ G
Sbjct: 60 VAVKMLKEGATHSEHRA-LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 118
Query: 666 LAQHL-------FEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
L+ +L + D LT + + + VA+G+E+L A + IHRDL NI
Sbjct: 119 LSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNI 175
Query: 719 LIGDDMRAKVADFGLVKNA---PDGKYSVETRLAGTFGYLAPE 758
L+ + K+ DFGL ++ PD + RL ++APE
Sbjct: 176 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP--LKWMAPE 216
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 13/153 (8%)
Query: 609 AVKRMESNTMGNKGLSEFQAEIAVLTKVRHR--HLVALLGYCINGSERLLVYEYMPRGTL 666
A+K + N+ L ++ EIA L K++ ++ L Y I +Y M G +
Sbjct: 56 AIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNI 112
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
L W + W+++ +E +H++ Q +H DLKP+N LI D M
Sbjct: 113 D--LNSWLKKKKSIDPWERKSYWK----NMLEAVHTIHQHGIVHSDLKPANFLIVDGM-L 165
Query: 727 KVADFGLVKN-APDGKYSVETRLAGTFGYLAPE 758
K+ DFG+ PD V+ GT Y+ PE
Sbjct: 166 KLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPE 198
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 67/147 (45%), Gaps = 18/147 (12%)
Query: 624 SEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTW 683
+ EIA+ + + H+V G+ + +V E R + L E H +T
Sbjct: 71 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRR----RSLLELHKRRKA-VTE 125
Query: 684 KQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV-KNAPDGKY 742
+ +GV+YLH+ IHRDLK N+ + DDM K+ DFGL K DG+
Sbjct: 126 PEARYFMRQTIQGVQYLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER 182
Query: 743 SVETRLAGTFGYLAPEYAGKHWMILCQ 769
+ L GT Y+APE +LC+
Sbjct: 183 KKD--LCGTPNYIAPE-------VLCK 200
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 27/167 (16%)
Query: 605 GTKIAVKRMESNTMGNKG--LSEFQAEIAVLTKVR---HRHLVALLGYC-INGSER---- 654
G +A+KR+ T G +G LS + E+AVL + H ++V L C ++ ++R
Sbjct: 37 GRFVALKRVRVQT-GEEGMPLSTIR-EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL 94
Query: 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLK 714
LV+E++ + L +L + + G T K + + RG+++LHS +HRDLK
Sbjct: 95 TLVFEHVDQD-LTTYLDKVPEPGVPTETIKD---MMFQLLRGLDFLHS---HRVVHRDLK 147
Query: 715 PSNILIGDDMRAKVADFGLVKNAPDGKYSVE---TRLAGTFGYLAPE 758
P NIL+ + K+ADFGL + YS + T + T Y APE
Sbjct: 148 PQNILVTSSGQIKLADFGLARI-----YSFQMALTSVVVTLWYRAPE 189
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 676 HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735
H PLT + + RG++Y+HS IHRDLKPSN+L+ ++ K+ DFG+ +
Sbjct: 150 HSSQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMAR 206
Query: 736 ---NAPDGKYSVETRLAGTFGYLAPE 758
+P T T Y APE
Sbjct: 207 GLCTSPAEHQYFMTEYVATRWYRAPE 232
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 676 HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735
H PLT + + RG++Y+HS IHRDLKPSN+L+ ++ K+ DFG+ +
Sbjct: 151 HSSQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMAR 207
Query: 736 ---NAPDGKYSVETRLAGTFGYLAPE 758
+P T T Y APE
Sbjct: 208 GLCTSPAEHQYFMTEYVATRWYRAPE 233
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 67/147 (45%), Gaps = 18/147 (12%)
Query: 624 SEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTW 683
+ EIA+ + + H+V G+ + +V E R + L E H +T
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRR----RSLLELHKRRKA-VTE 141
Query: 684 KQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV-KNAPDGKY 742
+ +GV+YLH+ IHRDLK N+ + DDM K+ DFGL K DG+
Sbjct: 142 PEARYFMRQTIQGVQYLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER 198
Query: 743 SVETRLAGTFGYLAPEYAGKHWMILCQ 769
+ L GT Y+APE +LC+
Sbjct: 199 --KKXLCGTPNYIAPE-------VLCK 216
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 22/167 (13%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCIN-GSERLLVYEYMPRGT 665
+AVK ++ ++ + +E+ +L + H ++V LLG C G +++ E+ G
Sbjct: 60 VAVKMLKEGATHSEHRA-LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 118
Query: 666 LAQHLF----EWHDHGYTP-------LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLK 714
L+ +L E+ + P LT + + + VA+G+E+L A + IHRDL
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 175
Query: 715 PSNILIGDDMRAKVADFGLVKNA---PDGKYSVETRLAGTFGYLAPE 758
NIL+ + K+ DFGL ++ PD + RL ++APE
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLP--LKWMAPE 220
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 21/168 (12%)
Query: 620 NKGLSEFQAEI----AVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHD 675
NK + +F EI ++L + H +++ L + LV E+ G L + + H
Sbjct: 83 NKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK 142
Query: 676 HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD---MRAKVADFG 732
I + G+ YLH + + +HRD+KP NIL+ + + K+ DFG
Sbjct: 143 FDECDAA-----NIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFG 194
Query: 733 LVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780
L + Y + RL GT Y+APE K + C +W G +
Sbjct: 195 L-SSFFSKDYKLRDRL-GTAYYIAPEVLKKKYNEKCD----VWSCGVI 236
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 72/151 (47%), Gaps = 6/151 (3%)
Query: 106 IPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSL 165
I +L T+L + L N S+P G FD LTNL+ L L +N L P K T+L
Sbjct: 78 ISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVEN-QLQSLP-DGVFDKLTNL 135
Query: 166 TTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPAS-FAK-SDIQNLWMNDQQLG 223
T LY+ + + L FD +NL L L NN SLP F K + ++ L +ND QL
Sbjct: 136 TYLYLYHNQLQSLPKGVFDKLTNLTRLDLD-NNQLQSLPEGVFDKLTQLKQLSLNDNQLK 194
Query: 224 LSGTLDVLSGMTQLRQVWLHKNQFTGPIPDL 254
S V +T L +WL N + D+
Sbjct: 195 -SVPDGVFDRLTSLTHIWLLNNPWDCACSDI 224
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 85 EISSLTQLETLSFQMNNI-AGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLS 143
++++LT L Q+ ++ G L N T L LDNN S+P G FD LT L+ LS
Sbjct: 131 KLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLD---LDNNQLQSLPEGVFDKLTQLKQLS 187
Query: 144 LSDN 147
L+DN
Sbjct: 188 LNDN 191
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 67/147 (45%), Gaps = 18/147 (12%)
Query: 624 SEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTW 683
+ EIA+ + + H+V G+ + +V E R + L E H +T
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRR----RSLLELHKRRKA-VTE 141
Query: 684 KQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV-KNAPDGKY 742
+ +GV+YLH+ IHRDLK N+ + DDM K+ DFGL K DG+
Sbjct: 142 PEARYFMRQTIQGVQYLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER 198
Query: 743 SVETRLAGTFGYLAPEYAGKHWMILCQ 769
+ L GT Y+APE +LC+
Sbjct: 199 --KKTLCGTPNYIAPE-------VLCK 216
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 18/144 (12%)
Query: 627 QAEIAVLTKVRHRHLVALLGYCINGS----ERLLVYEYMPRGTLAQHLFEWHDHGYTPLT 682
+ E+ L ++H +++ +G G+ + L+ + +G+L+ L ++
Sbjct: 66 EYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL------KANVVS 119
Query: 683 WKQRVTIALDVARGVEYLHSLA-------QQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735
W + IA +ARG+ YLH + + HRD+K N+L+ +++ A +ADFGL
Sbjct: 120 WNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL 179
Query: 736 NAPDGKYSVETR-LAGTFGYLAPE 758
GK + +T GT Y+APE
Sbjct: 180 KFEAGKSAGDTHGQVGTRRYMAPE 203
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 56/136 (41%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY P G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N++I KV DFGL K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 197 X----LCGTPEYLAPE 208
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 606 TKIAVKRM---ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
++A+K++ E T + L E I +L + RH +++ IN R E M
Sbjct: 49 VRVAIKKISPFEHQTYCQRTLRE----IKILLRFRHENIIG-----INDIIRAPTIEQMK 99
Query: 663 RGTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
+ Q L E + L+ + RG++Y+HS + +HRDLKPSN+L
Sbjct: 100 DVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLL 156
Query: 720 IGDDMRAKVADFGLVKNA-PDGKYS-VETRLAGTFGYLAPE 758
+ K+ DFGL + A PD ++ T T Y APE
Sbjct: 157 LNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 13/153 (8%)
Query: 609 AVKRMESNTMGNKGLSEFQAEIAVLTKVRHR--HLVALLGYCINGSERLLVYEYMPRGTL 666
A+K + N+ L ++ EIA L K++ ++ L Y I +Y M G +
Sbjct: 40 AIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNI 96
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
L W + W+++ +E +H++ Q +H DLKP+N LI D M
Sbjct: 97 D--LNSWLKKKKSIDPWERKSYWK----NMLEAVHTIHQHGIVHSDLKPANFLIVDGM-L 149
Query: 727 KVADFGLVKN-APDGKYSVETRLAGTFGYLAPE 758
K+ DFG+ PD V+ GT Y+ PE
Sbjct: 150 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 182
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 19/145 (13%)
Query: 627 QAEIAVLTKVRHRHLVALLGYCINGS----ERLLVYEYMPRGTLAQHLFEWHDHGYTPLT 682
+ EI ++H +L+ + GS E L+ + +G+L +L +T
Sbjct: 57 EREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYL------KGNIIT 110
Query: 683 WKQRVTIALDVARGVEYLHSLA--------QQSFIHRDLKPSNILIGDDMRAKVADFGLV 734
W + +A ++RG+ YLH + S HRD K N+L+ D+ A +ADFGL
Sbjct: 111 WNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA 170
Query: 735 KNAPDGKYSVETR-LAGTFGYLAPE 758
GK +T GT Y+APE
Sbjct: 171 VRFEPGKPPGDTHGQVGTRRYMAPE 195
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 606 TKIAVKRM---ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
++A++++ E T + L E I +L + RH +++ IN R E M
Sbjct: 53 VRVAIRKISPFEHQTYCQRTLRE----IKILLRFRHENIIG-----INDIIRAPTIEQMK 103
Query: 663 RGTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
+ Q L E + L+ + RG++Y+HS + +HRDLKPSN+L
Sbjct: 104 DVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLL 160
Query: 720 IGDDMRAKVADFGLVKNA-PDGKYS-VETRLAGTFGYLAPE 758
+ K+ DFGL + A PD ++ T T Y APE
Sbjct: 161 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 22/167 (13%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCIN-GSERLLVYEYMPRGT 665
+AVK ++ ++ + +E+ +L + H ++V LLG C G +++ E+ G
Sbjct: 51 VAVKMLKEGATHSEHRA-LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 109
Query: 666 LAQHLF----EWHDHGYTP-------LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLK 714
L+ +L E+ + P LT + + + VA+G+E+L A + IHRDL
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 166
Query: 715 PSNILIGDDMRAKVADFGLVKNA---PDGKYSVETRLAGTFGYLAPE 758
NIL+ + K+ DFGL ++ PD + RL ++APE
Sbjct: 167 ARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP--LKWMAPE 211
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 163 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 215
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM MT IW G +
Sbjct: 216 WYRAPEIM-LNWMHY-NMTVDIWSVGCI 241
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 609 AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQ 668
A+K + ++ S+ E+AVL + H +++ L + + LV E G L
Sbjct: 66 AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFD 125
Query: 669 HLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI---GDDMR 725
+ H + + I V GV YLH + + +HRDLKP N+L+ D
Sbjct: 126 EII--HRMKFNEV---DAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDAL 177
Query: 726 AKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQM 770
K+ DFGL + K ++ RL GT Y+APE K + C +
Sbjct: 178 IKIVDFGLSAVFENQK-KMKERL-GTAYYIAPEVLRKKYDEKCDV 220
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 627 QAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQR 686
Q EI VL++ ++ G + ++ ++ EY+ G+ L PL
Sbjct: 65 QQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL------KPGPLEETYI 118
Query: 687 VTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVET 746
TI ++ +G++YLHS + IHRD+K +N+L+ + K+ADFG+ D +
Sbjct: 119 ATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK-RN 174
Query: 747 RLAGTFGYLAPE 758
GT ++APE
Sbjct: 175 XFVGTPFWMAPE 186
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 13/153 (8%)
Query: 609 AVKRMESNTMGNKGLSEFQAEIAVLTKVRHR--HLVALLGYCINGSERLLVYEYMPRGTL 666
A+K + N+ L ++ EIA L K++ ++ L Y I +Y M G +
Sbjct: 84 AIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNI 140
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
L W + W+++ +E +H++ Q +H DLKP+N LI D M
Sbjct: 141 D--LNSWLKKKKSIDPWERKSYWK----NMLEAVHTIHQHGIVHSDLKPANFLIVDGM-L 193
Query: 727 KVADFGLVKN-APDGKYSVETRLAGTFGYLAPE 758
K+ DFG+ PD V+ GT Y+ PE
Sbjct: 194 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 13/153 (8%)
Query: 609 AVKRMESNTMGNKGLSEFQAEIAVLTKVRHR--HLVALLGYCINGSERLLVYEYMPRGTL 666
A+K + N+ L ++ EIA L K++ ++ L Y I +Y M G +
Sbjct: 56 AIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNI 112
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
L W + W+++ +E +H++ Q +H DLKP+N LI D M
Sbjct: 113 D--LNSWLKKKKSIDPWERKSYWK----NMLEAVHTIHQHGIVHSDLKPANFLIVDGM-L 165
Query: 727 KVADFGLVKN-APDGKYSVETRLAGTFGYLAPE 758
K+ DFG+ PD V+ GT Y+ PE
Sbjct: 166 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 198
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 57/136 (41%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+P G + HL E H Y
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY---- 147
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 148 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 197
Query: 743 SVETRLAGTFGYLAPE 758
+ L GT YLAPE
Sbjct: 198 T----LCGTPEYLAPE 209
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
K KR ++ + + E+++L +++H +++ L N ++ +L+ E + G
Sbjct: 40 AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGG 99
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-- 722
L L E LT ++ + GV YLHSL H DLKP NI++ D
Sbjct: 100 ELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRN 151
Query: 723 --DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
R K+ DFGL G + GT ++APE
Sbjct: 152 VPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPAFVAPE 187
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 8/140 (5%)
Query: 604 DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663
D T +AVK T+ ++F E +L + H ++V L+G C +V E +
Sbjct: 138 DNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQG 196
Query: 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
G L G L K + + D A G+EYL S + IHRDL N L+ +
Sbjct: 197 GDFLTFL---RTEG-ARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEK 249
Query: 724 MRAKVADFGLVKNAPDGKYS 743
K++DFG+ + DG Y+
Sbjct: 250 NVLKISDFGMSREEADGVYA 269
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 606 TKIAVKRM---ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
++A+K++ E T + L E I +L RH +++ IN R E M
Sbjct: 51 VRVAIKKISPFEHQTYCQRTLRE----IKILLAFRHENIIG-----INDIIRAPTIEQMK 101
Query: 663 RGTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
+ Q L E + L+ + RG++Y+HS + +HRDLKPSN+L
Sbjct: 102 DVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLL 158
Query: 720 IGDDMRAKVADFGLVKNA-PDGKYS-VETRLAGTFGYLAPE 758
+ K+ DFGL + A PD ++ T T Y APE
Sbjct: 159 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 23/167 (13%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCIN-GSERLLVYEYMPRGT 665
+AVK ++ ++ + +E+ +L + H ++V LLG C G +++ E+ G
Sbjct: 61 VAVKMLKEGATHSEHRA-LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 119
Query: 666 LAQHLFEWHDHGYTP-----------LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLK 714
L+ +L + + P LT + + + VA+G+E+L A + IHRDL
Sbjct: 120 LSTYLRSKRNE-FVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 175
Query: 715 PSNILIGDDMRAKVADFGLVKNA---PDGKYSVETRLAGTFGYLAPE 758
NIL+ + K+ DFGL ++ PD + RL ++APE
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP--LKWMAPE 220
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 22/167 (13%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCIN-GSERLLVYEYMPRGT 665
+AVK ++ ++ + +E+ +L + H ++V LLG C G +++ E+ G
Sbjct: 97 VAVKMLKEGATHSEHRA-LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 155
Query: 666 LAQHLF----EWHDHGYTP-------LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLK 714
L+ +L E+ + P LT + + + VA+G+E+L A + IHRDL
Sbjct: 156 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 212
Query: 715 PSNILIGDDMRAKVADFGLVKNA---PDGKYSVETRLAGTFGYLAPE 758
NIL+ + K+ DFGL ++ PD + RL ++APE
Sbjct: 213 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP--LKWMAPE 257
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 27/167 (16%)
Query: 605 GTKIAVKRMESNTMGNKG--LSEFQAEIAVLTKVR---HRHLVALLGYC-INGSER---- 654
G +A+KR+ T G +G LS + E+AVL + H ++V L C ++ ++R
Sbjct: 37 GRFVALKRVRVQT-GEEGMPLSTIR-EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL 94
Query: 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLK 714
LV+E++ + L +L + + G T K + + RG+++LHS +HRDLK
Sbjct: 95 TLVFEHVDQD-LTTYLDKVPEPGVPTETIKD---MMFQLLRGLDFLHS---HRVVHRDLK 147
Query: 715 PSNILIGDDMRAKVADFGLVKNAPDGKYSVE---TRLAGTFGYLAPE 758
P NIL+ + K+ADFGL + YS + T + T Y APE
Sbjct: 148 PQNILVTSSGQIKLADFGLARI-----YSFQMALTSVVVTLWYRAPE 189
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 22/167 (13%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCIN-GSERLLVYEYMPRGT 665
+AVK ++ ++ + +E+ +L + H ++V LLG C G +++ E+ G
Sbjct: 60 VAVKMLKEGATHSEHRA-LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 118
Query: 666 LAQHLF----EWHDHGYTP-------LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLK 714
L+ +L E+ + P LT + + + VA+G+E+L A + IHRDL
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 175
Query: 715 PSNILIGDDMRAKVADFGLVKNA---PDGKYSVETRLAGTFGYLAPE 758
NIL+ + K+ DFGL ++ PD + RL ++APE
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP--LKWMAPE 220
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCIN-GSERLLVYEYMPRGT 665
+AVK ++ ++ + +E+ +L + H ++V LLG C G +++ E+ G
Sbjct: 60 VAVKMLKEGATHSEHRA-LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 118
Query: 666 LAQHL-------FEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
L+ +L + D LT + + + VA+G+E+L A + IHRDL NI
Sbjct: 119 LSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNI 175
Query: 719 LIGDDMRAKVADFGLVKNA---PDGKYSVETRLAGTFGYLAPE 758
L+ + K+ DFGL ++ PD + RL ++APE
Sbjct: 176 LLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP--LKWMAPE 216
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 57/136 (41%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+P G + HL E H Y
Sbjct: 77 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY---- 132
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 133 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 182
Query: 743 SVETRLAGTFGYLAPE 758
+ L GT YLAPE
Sbjct: 183 T----LCGTPEYLAPE 194
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 27/167 (16%)
Query: 605 GTKIAVKRMESNTMGNKG--LSEFQAEIAVLTKVR---HRHLVALLGYC-INGSER---- 654
G +A+KR+ T G +G LS + E+AVL + H ++V L C ++ ++R
Sbjct: 37 GRFVALKRVRVQT-GEEGMPLSTIR-EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL 94
Query: 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLK 714
LV+E++ + L +L + + G T K + + RG+++LHS +HRDLK
Sbjct: 95 TLVFEHVDQD-LTTYLDKVPEPGVPTETIKD---MMFQLLRGLDFLHS---HRVVHRDLK 147
Query: 715 PSNILIGDDMRAKVADFGLVKNAPDGKYSVE---TRLAGTFGYLAPE 758
P NIL+ + K+ADFGL + YS + T + T Y APE
Sbjct: 148 PQNILVTSSGQIKLADFGLARI-----YSFQMALTSVVVTLWYRAPE 189
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 22/167 (13%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCIN-GSERLLVYEYMPRGT 665
+AVK ++ ++ + +E+ +L + H ++V LLG C G +++ E+ G
Sbjct: 51 VAVKMLKEGATHSEHRA-LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGN 109
Query: 666 LAQHLF----EWHDHGYTP-------LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLK 714
L+ +L E+ + P LT + + + VA+G+E+L A + IHRDL
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 166
Query: 715 PSNILIGDDMRAKVADFGLVKNA---PDGKYSVETRLAGTFGYLAPE 758
NIL+ + K+ DFGL ++ PD + RL ++APE
Sbjct: 167 ARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP--LKWMAPE 211
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 56/136 (41%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHL------FEWHDHGYTPLT 682
E +L V LV L + S +V EY+P G + HL E H Y
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY---- 139
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 140 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 189
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 190 X----LCGTPEYLAPE 201
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 13/138 (9%)
Query: 602 LPDGTKI----AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657
+PDG + A+K + NT K E E V+ V ++ LLG C+ + +L V
Sbjct: 39 IPDGENVKIPVAIKVLRENT-SPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQL-V 96
Query: 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSN 717
+ MP G L H+ E + G L + + + +A+G+ YL + +HRDL N
Sbjct: 97 TQLMPYGCLLDHVRE--NRGR--LGSQDLLNWCMQIAKGMSYLEDV---RLVHRDLAARN 149
Query: 718 ILIGDDMRAKVADFGLVK 735
+L+ K+ DFGL +
Sbjct: 150 VLVKSPNHVKITDFGLAR 167
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 17/158 (10%)
Query: 616 NTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHD 675
+T + L ++ EI +L H ++V LL + ++ E+ G + + E
Sbjct: 44 DTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE- 102
Query: 676 HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735
PLT Q + + YLH IHRDLK NIL D K+ADFG+
Sbjct: 103 ---RPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGV-- 154
Query: 736 NAPDGKYSVETR--LAGTFGYLAPEYAGKHWMILCQMT 771
+A + + ++ R GT ++APE +++C+ +
Sbjct: 155 SAKNTRTXIQRRDSFIGTPYWMAPE------VVMCETS 186
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 141 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM----TGYVATR 193
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 194 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 219
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 56/136 (41%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHL------FEWHDHGYTPLT 682
E +L V LV L + S +V EY+P G + HL E H Y
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY---- 147
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 148 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 197
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 198 X----LCGTPEYLAPE 209
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM----TGYVATR 186
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 187 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 212
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 141 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM----TGYVATR 193
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 194 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 219
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 13/153 (8%)
Query: 609 AVKRMESNTMGNKGLSEFQAEIAVLTKVRHR--HLVALLGYCINGSERLLVYEYMPRGTL 666
A+K + N+ L ++ EIA L K++ ++ L Y I +Y M G +
Sbjct: 36 AIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNI 92
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
L W + W+++ +E +H++ Q +H DLKP+N LI D M
Sbjct: 93 D--LNSWLKKKKSIDPWERKSYWK----NMLEAVHTIHQHGIVHSDLKPANFLIVDGM-L 145
Query: 727 KVADFGLVKN-APDGKYSVETRLAGTFGYLAPE 758
K+ DFG+ PD V+ GT Y+ PE
Sbjct: 146 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 178
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 141 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM----TGYVATR 193
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 194 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 219
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 52/124 (41%), Gaps = 24/124 (19%)
Query: 641 LVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLTWKQRVTIALDVA 694
LV L + S +V EY P G + HL E H Y A +
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFY-----------AAQIV 152
Query: 695 RGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGY 754
EYLHSL I+RDLKP N+LI KVADFG K + L GT Y
Sbjct: 153 LTFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX----LCGTPEY 205
Query: 755 LAPE 758
LAPE
Sbjct: 206 LAPE 209
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 56/136 (41%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHL------FEWHDHGYTPLT 682
E +L V LV L + S +V EY+P G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 197 X----LCGTPEYLAPE 208
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 13/153 (8%)
Query: 609 AVKRMESNTMGNKGLSEFQAEIAVLTKVRHR--HLVALLGYCINGSERLLVYEYMPRGTL 666
A+K + N+ L ++ EIA L K++ ++ L Y I +Y M G +
Sbjct: 37 AIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNI 93
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
L W + W+++ +E +H++ Q +H DLKP+N LI D M
Sbjct: 94 D--LNSWLKKKKSIDPWERKSYWK----NMLEAVHTIHQHGIVHSDLKPANFLIVDGM-L 146
Query: 727 KVADFGLVKN-APDGKYSVETRLAGTFGYLAPE 758
K+ DFG+ PD V+ GT Y+ PE
Sbjct: 147 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 179
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 56/136 (41%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHL------FEWHDHGYTPLT 682
E +L V LV L + S +V EY+P G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 197 X----LCGTPEYLAPE 208
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 55/136 (40%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHL------FEWHDHGYTPLT 682
E +L V LV L + S +V EY P G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N++I KV DFG K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 197 X----LCGTPEYLAPE 208
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
K KR ++ + + E+++L +++H +++ L N ++ +L+ E + G
Sbjct: 40 AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGG 99
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-- 722
L L E LT ++ + GV YLHSL H DLKP NI++ D
Sbjct: 100 ELFDFLAEKE-----SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRN 151
Query: 723 --DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
R K+ DFGL G + GT ++APE
Sbjct: 152 VPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPE 187
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 139 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM----TGYVATR 191
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 192 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 217
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 606 TKIAVKRM---ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
++A+K++ E T + L E I +L + RH +++ IN R E M
Sbjct: 69 VRVAIKKISPFEHQTYCQRTLRE----IKILLRFRHENIIG-----INDIIRAPTIEQMK 119
Query: 663 RGTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
L HL + L+ + RG++Y+HS + +HRDLKPSN+L
Sbjct: 120 DVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLL 176
Query: 720 IGDDMRAKVADFGLVKNA-PDGKYS-VETRLAGTFGYLAPE 758
+ K+ DFGL + A PD ++ T T Y APE
Sbjct: 177 LNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 139 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM----TGYVATR 191
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 192 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 217
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 22/167 (13%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCIN-GSERLLVYEYMPRGT 665
+AVK ++ ++ + +E+ +L + H ++V LLG C G +++ E+ G
Sbjct: 62 VAVKMLKEGATHSEHRA-LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 120
Query: 666 LAQHLF----EWHDHGYTP-------LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLK 714
L+ +L E+ + P LT + + + VA+G+E+L A + IHRDL
Sbjct: 121 LSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 177
Query: 715 PSNILIGDDMRAKVADFGLVKNA---PDGKYSVETRLAGTFGYLAPE 758
NIL+ + K+ DFGL ++ PD + RL ++APE
Sbjct: 178 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP--LKWMAPE 222
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 13/153 (8%)
Query: 609 AVKRMESNTMGNKGLSEFQAEIAVLTKVRHR--HLVALLGYCINGSERLLVYEYMPRGTL 666
A+K + N+ L ++ EIA L K++ ++ L Y I +Y M G +
Sbjct: 84 AIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNI 140
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
L W + W+++ +E +H++ Q +H DLKP+N LI D M
Sbjct: 141 D--LNSWLKKKKSIDPWERKSYWK----NMLEAVHTIHQHGIVHSDLKPANFLIVDGM-L 193
Query: 727 KVADFGLVKN-APDGKYSVETRLAGTFGYLAPE 758
K+ DFG+ PD V+ GT Y+ PE
Sbjct: 194 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 607 KIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPRGT 665
K+AVK ++S ++ +E+ +++ + +H ++V LLG C +G L++ EY G
Sbjct: 78 KVAVKMLKSTAHADEK-EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 666 LAQHLFEWH-----DHGY----TPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPS 716
L L D + + + + + + VA+G+ +L A ++ IHRD+
Sbjct: 137 LLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAAR 193
Query: 717 NILIGDDMRAKVADFGLVKNAP-DGKYSVETRLAGTFGYLAPE 758
N+L+ + AK+ DFGL ++ D Y V+ ++APE
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPE 236
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
K KR S++ E + E+ +L ++RH +++ L N ++ +L+ E + G
Sbjct: 41 AAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGG 100
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-- 722
L L E LT + + GV YLHS + H DLKP NI++ D
Sbjct: 101 ELFDFLAEKE-----SLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKN 152
Query: 723 --DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
+ R K+ DFG+ G + GT ++APE
Sbjct: 153 VPNPRIKLIDFGIAHKIEAGNEF--KNIFGTPEFVAPE 188
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 56/136 (41%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+P G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 197 X----LCGTPEYLAPE 208
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
K KR ++ + + E+++L +++H +++ L N ++ +L+ E + G
Sbjct: 40 AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGG 99
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-- 722
L L E LT ++ + GV YLHSL H DLKP NI++ D
Sbjct: 100 ELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRN 151
Query: 723 --DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
R K+ DFGL G + GT ++APE
Sbjct: 152 VPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPE 187
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 145 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM----TGYVATR 197
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 198 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 223
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 606 TKIAVKRM---ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
++A+K++ E T + L E I +L RH +++ IN R E M
Sbjct: 51 VRVAIKKISPFEHQTYCQRTLRE----IKILLAFRHENIIG-----INDIIRAPTIEQMK 101
Query: 663 RGTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
+ Q L E + L+ + RG++Y+HS + +HRDLKPSN+L
Sbjct: 102 DVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLL 158
Query: 720 IGDDMRAKVADFGLVKNA-PDGKYS-VETRLAGTFGYLAPE 758
+ K+ DFGL + A PD ++ T T Y APE
Sbjct: 159 LNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
K KR ++ + + E+++L +++H +++ L N ++ +L+ E + G
Sbjct: 39 AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGG 98
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-- 722
L L E LT ++ + GV YLHSL H DLKP NI++ D
Sbjct: 99 ELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRN 150
Query: 723 --DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
R K+ DFGL G + GT ++APE
Sbjct: 151 VPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPE 186
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
K KR ++ + + E+++L +++H +++ L N ++ +L+ E + G
Sbjct: 39 AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGG 98
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-- 722
L L E LT ++ + GV YLHSL H DLKP NI++ D
Sbjct: 99 ELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRN 150
Query: 723 --DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
R K+ DFGL G + GT ++APE
Sbjct: 151 VPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPE 186
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 54/130 (41%), Gaps = 12/130 (9%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
E +L V LV L + S +V EY+P G + HL +
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARF 145
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRL 748
A + EYLHSL I+RDLKP N+LI +V DFG K + L
Sbjct: 146 YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----L 198
Query: 749 AGTFGYLAPE 758
GT YLAPE
Sbjct: 199 CGTPEYLAPE 208
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
K KR S++ E + E+ +L ++RH +++ L N ++ +L+ E + G
Sbjct: 34 AAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGG 93
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-- 722
L L E LT + + GV YLHS + H DLKP NI++ D
Sbjct: 94 ELFDFLAEKE-----SLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKN 145
Query: 723 --DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
+ R K+ DFG+ G + GT ++APE
Sbjct: 146 VPNPRIKLIDFGIAHKIEAGNEF--KNIFGTPEFVAPE 181
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 60/131 (45%), Gaps = 11/131 (8%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRV 687
E VL RH L AL Y +RL V EY G L HL T ++
Sbjct: 55 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRER-----VFTEERAR 108
Query: 688 TIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETR 747
++ +EYLHS + ++RD+K N+++ D K+ DFGL K +++T
Sbjct: 109 FYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT- 164
Query: 748 LAGTFGYLAPE 758
GT YLAPE
Sbjct: 165 FCGTPEYLAPE 175
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 20/167 (11%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G A K +E T + L ++ EI +L H ++V LLG + + ++ E+ P G
Sbjct: 36 GALAAAKVIE--TKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGG 93
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+ + E D G LT Q + + + +LHS + IHRDLK N+L+ +
Sbjct: 94 AVDAIMLEL-DRG---LTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEG 146
Query: 725 RAKVADFGLVKNAPDGKYSVETR--LAGTFGYLAPEYAGKHWMILCQ 769
++ADFG+ +A + K +++ R GT ++APE +++C+
Sbjct: 147 DIRLADFGV--SAKNLK-TLQKRDSFIGTPYWMAPE------VVMCE 184
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 186
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 187 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 212
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 186
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 187 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 212
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 186
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 187 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 212
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 139 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 191
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 192 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 217
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 56/136 (41%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+P G + HL E H Y
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY---- 147
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 148 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 197
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 198 X----LCGTPEYLAPE 209
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 56/136 (41%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+P G + HL E H Y
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY---- 139
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 140 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 189
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 190 X----LCGTPEYLAPE 201
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 186
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 187 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 212
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 56/136 (41%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+P G + HL E H Y
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY---- 147
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 148 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 197
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 198 X----LCGTPEYLAPE 209
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 133 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 185
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 186 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 211
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
K KR ++ + + E+++L +++H +++ L N ++ +L+ E + G
Sbjct: 40 AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGG 99
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-- 722
L L E LT ++ + GV YLHSL H DLKP NI++ D
Sbjct: 100 ELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRN 151
Query: 723 --DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
R K+ DFGL G + GT ++APE
Sbjct: 152 VPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPE 187
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 141 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 193
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 194 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 219
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 56/136 (41%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+P G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 197 X----LCGTPEYLAPE 208
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
K KR ++ + + E+++L +++H +++ L N ++ +L+ E + G
Sbjct: 40 AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGG 99
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-- 722
L L E LT ++ + GV YLHSL H DLKP NI++ D
Sbjct: 100 ELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRN 151
Query: 723 --DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
R K+ DFGL G + GT ++APE
Sbjct: 152 VPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPE 187
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
K KR ++ + + E+++L +++H +++ L N ++ +L+ E + G
Sbjct: 40 AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGG 99
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-- 722
L L E LT ++ + GV YLHSL H DLKP NI++ D
Sbjct: 100 ELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRN 151
Query: 723 --DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
R K+ DFGL G + GT ++APE
Sbjct: 152 VPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPE 187
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 186
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 187 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 212
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 136 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 188
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 189 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 214
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 136 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 188
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 189 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 214
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 186
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 187 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 212
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 22/167 (13%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCIN-GSERLLVYEYMPRGT 665
+AVK ++ ++ + +E+ +L + H ++V LLG C G +++ E+ G
Sbjct: 51 VAVKMLKEGATHSEHRA-LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGN 109
Query: 666 LAQHLF----EWHDHGYTP-------LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLK 714
L+ +L E+ + P LT + + + VA+G+E+L A + IHRDL
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 166
Query: 715 PSNILIGDDMRAKVADFGLVKNA---PDGKYSVETRLAGTFGYLAPE 758
NIL+ + K+ DFGL ++ PD + RL ++APE
Sbjct: 167 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP--LKWMAPE 211
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 186
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 187 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 212
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 55/136 (40%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY P G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N++I KV DFG K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 197 X----LCGTPEYLAPE 208
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 140 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 192
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 193 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 218
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 139 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 191
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 192 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 217
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 146 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 198
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 199 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 224
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 56/136 (41%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+P G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 197 X----LCGTPEYLAPE 208
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
K KR ++ + + E+++L +++H +++ L N ++ +L+ E + G
Sbjct: 40 AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGG 99
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-- 722
L L E LT ++ + GV YLHSL H DLKP NI++ D
Sbjct: 100 ELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRN 151
Query: 723 --DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
R K+ DFGL G + GT ++APE
Sbjct: 152 VPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPE 187
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 136 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 188
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 189 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 214
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 186
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 187 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 212
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 131 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 183
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 184 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 209
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 146 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 198
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 199 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 224
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 56/136 (41%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+P G + HL E H Y
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY---- 147
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 148 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 197
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 198 X----LCGTPEYLAPE 209
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 55/136 (40%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY P G + HL E H Y
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY---- 147
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N++I KV DFG K +
Sbjct: 148 -------AAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW 197
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 198 X----LCGTPEYLAPE 209
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 145 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 197
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 198 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 223
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 146 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 198
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 199 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 224
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
K KR ++ + + E+++L +++H +++ L N ++ +L+ E + G
Sbjct: 40 AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGG 99
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-- 722
L L E LT ++ + GV YLHSL H DLKP NI++ D
Sbjct: 100 ELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRN 151
Query: 723 --DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
R K+ DFGL G + GT ++APE
Sbjct: 152 VPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPE 187
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 60/131 (45%), Gaps = 11/131 (8%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRV 687
E VL RH L AL Y +RL V EY G L HL T ++
Sbjct: 58 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRER-----VFTEERAR 111
Query: 688 TIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETR 747
++ +EYLHS + ++RD+K N+++ D K+ DFGL K +++T
Sbjct: 112 FYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT- 167
Query: 748 LAGTFGYLAPE 758
GT YLAPE
Sbjct: 168 FCGTPEYLAPE 178
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 144 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 196
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 197 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 222
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
K KR ++ + + E+++L +++H +++ L N ++ +L+ E + G
Sbjct: 40 AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGG 99
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-- 722
L L E LT ++ + GV YLHSL H DLKP NI++ D
Sbjct: 100 ELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRN 151
Query: 723 --DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
R K+ DFGL G + GT ++APE
Sbjct: 152 VPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPE 187
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 186
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 187 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 212
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGXVATR 186
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 187 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 212
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 54/130 (41%), Gaps = 12/130 (9%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
E +L V LV L + S +V EY+P G + HL +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----RRIGRFSEPHARF 145
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRL 748
A + EYLHSL I+RDLKP N+LI +V DFG K + L
Sbjct: 146 YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----L 198
Query: 749 AGTFGYLAPE 758
GT YLAPE
Sbjct: 199 CGTPEYLAPE 208
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 60/131 (45%), Gaps = 11/131 (8%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRV 687
E VL RH L AL Y +RL V EY G L HL T ++
Sbjct: 55 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRER-----VFTEERAR 108
Query: 688 TIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETR 747
++ +EYLHS + ++RD+K N+++ D K+ DFGL K +++T
Sbjct: 109 FYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT- 164
Query: 748 LAGTFGYLAPE 758
GT YLAPE
Sbjct: 165 FCGTPEYLAPE 175
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 131 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 183
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 184 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 209
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 56/136 (41%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+P G + HL E H Y
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY---- 147
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 148 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 197
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 198 X----LCGTPEYLAPE 209
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 132 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 184
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 185 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 210
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 606 TKIAVKRM---ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
++A+K++ E T + L E I +L + RH +++ IN R E M
Sbjct: 53 VRVAIKKISPFEHQTYCQRTLRE----IKILLRFRHENIIG-----INDIIRAPTIEQMK 103
Query: 663 RGTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
+ Q L E + L+ + RG++Y+HS + +HRDLKPSN+L
Sbjct: 104 DVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLL 160
Query: 720 IGDDMRAKVADFGLVKNA-PDGKYS-VETRLAGTFGYLAPE 758
+ K+ DFGL + A PD ++ T Y APE
Sbjct: 161 LNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 201
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 56/136 (41%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+P G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 197 X----LCGTPEYLAPE 208
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 606 TKIAVKRM---ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
++A+K++ E T + L E I +L + RH +++ IN R E M
Sbjct: 54 VRVAIKKISPFEHQTYCQRTLRE----IKILLRFRHENIIG-----INDIIRAPTIEQMK 104
Query: 663 RGTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
+ Q L E + L+ + RG++Y+HS + +HRDLKPSN+L
Sbjct: 105 DVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLL 161
Query: 720 IGDDMRAKVADFGLVKNA-PDGKYS-VETRLAGTFGYLAPE 758
+ K+ DFGL + A PD ++ T Y APE
Sbjct: 162 LNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 202
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 136 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM----TGYVATR 188
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 189 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 214
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 153 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 205
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 206 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 231
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 154 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 206
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 207 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 232
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 22/167 (13%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCIN-GSERLLVYEYMPRGT 665
+AVK ++ ++ + +E+ +L + H ++V LLG C G +++ E+ G
Sbjct: 51 VAVKMLKEGATHSEHRA-LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGN 109
Query: 666 LAQHLF----EWHDHGYTP-------LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLK 714
L+ +L E+ + P LT + + + VA+G+E+L A + IHRDL
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 166
Query: 715 PSNILIGDDMRAKVADFGLVKNA---PDGKYSVETRLAGTFGYLAPE 758
NIL+ + K+ DFGL ++ PD + RL ++APE
Sbjct: 167 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP--LKWMAPE 211
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 157 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 209
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 210 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 235
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 140 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM----TGYVATR 192
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 193 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 130 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 182
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 183 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 208
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
K KR ++ + + E+++L +++H +++ L N ++ +L+ E + G
Sbjct: 40 AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGG 99
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-- 722
L L E LT ++ + GV YLHSL H DLKP NI++ D
Sbjct: 100 ELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRN 151
Query: 723 --DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
R K+ DFGL G + GT ++APE
Sbjct: 152 VPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPE 187
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 130 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 182
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 183 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 208
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 140 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 192
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 193 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 218
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 154 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 206
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 207 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 232
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 153 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 205
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 206 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 231
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 54/130 (41%), Gaps = 12/130 (9%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
E +L V LV L + S +V EY P G + HL +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-----RRIGRFSEPHARF 145
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRL 748
A + EYLHSL I+RDLKP N++I +V DFGL K + L
Sbjct: 146 YAAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWX----L 198
Query: 749 AGTFGYLAPE 758
GT YLAPE
Sbjct: 199 CGTPEYLAPE 208
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 56/136 (41%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+P G + HL E H Y
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY---- 167
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 168 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 217
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 218 X----LCGTPEYLAPE 229
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 606 TKIAVKRM---ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
T++A+K++ E T + L E Q +L + RH +++ I R E M
Sbjct: 69 TRVAIKKISPFEHQTYCQRTLREIQ----ILLRFRHENVIG-----IRDILRASTLEAMR 119
Query: 663 RGTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
+ Q L E + L+ + RG++Y+HS + +HRDLKPSN+L
Sbjct: 120 DVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLL 176
Query: 720 IGDDMRAKVADFGLVKNA-PDGKYS-VETRLAGTFGYLAPE 758
I K+ DFGL + A P+ ++ T T Y APE
Sbjct: 177 INTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPE 217
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEM----TGYVATR 186
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 187 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 212
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 140 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 192
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 193 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 218
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 20/167 (11%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G A K +E T + L ++ EI +L H ++V LLG + + ++ E+ P G
Sbjct: 44 GALAAAKVIE--TKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGG 101
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+ + E D G LT Q + + + +LHS + IHRDLK N+L+ +
Sbjct: 102 AVDAIMLEL-DRG---LTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEG 154
Query: 725 RAKVADFGLVKNAPDGKYSVETR--LAGTFGYLAPEYAGKHWMILCQ 769
++ADFG+ +A + K +++ R GT ++APE +++C+
Sbjct: 155 DIRLADFGV--SAKNLK-TLQKRDSFIGTPYWMAPE------VVMCE 192
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 130 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 182
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 183 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 208
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
K KR ++ + + E+++L +++H +++ L N ++ +L+ E + G
Sbjct: 40 AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGG 99
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-- 722
L L E LT ++ + GV YLHSL H DLKP NI++ D
Sbjct: 100 ELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRN 151
Query: 723 --DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
R K+ DFGL G + GT ++APE
Sbjct: 152 VPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPE 187
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
I +R+ S+ G E + E+ +L ++RH +++ L N ++ +L+ E + G L
Sbjct: 59 IKKRRLXSSRRG-VSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELF 117
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD----D 723
L E LT + + GV YLHS + H DLKP NI++ D +
Sbjct: 118 DFLAEKE-----SLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPN 169
Query: 724 MRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
R K+ DFG+ G + GT ++APE
Sbjct: 170 PRIKLIDFGIAHKIEAGNEF--KNIFGTPEFVAPE 202
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
EI +L ++ H +++ LL + S LV+++M T + + + + TP K +
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME--TDLEVIIKDNSLVLTPSHIKAYML 119
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN--APDGKYSVET 746
+ L +G+EYLH Q +HRDLKP+N+L+ ++ K+ADFGL K+ +P+ Y +
Sbjct: 120 MTL---QGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQV 173
Query: 747 RLAGTFGYLAPE 758
T Y APE
Sbjct: 174 V---TRWYRAPE 182
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 93 ETLSFQMNNIAG-AIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLA 151
E L Q +A + + T L + LD N ++ G FD LT L L L++N LA
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANN-QLA 96
Query: 152 PWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPA-SFAK- 209
P T L LY+ + L FD + L+ LRL+ N S+PA +F K
Sbjct: 97 SLPL-GVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKL 154
Query: 210 SDIQNLWMNDQQLGL--SGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLF 261
+++Q L ++ QL G D L +L+ + L NQF D S+CE+L+
Sbjct: 155 TNLQTLSLSTNQLQSVPHGAFDRLG---KLQTITLFGNQF-----DCSRCETLY 200
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 63 DNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPS--LANATSLQDIYL 120
D+ + T+ LA + L+ LTQL+ L N + ++PS T L+++ L
Sbjct: 80 DDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRL 138
Query: 121 DNNNFTSVPTGCFDGLTNLQVLSLSDN 147
+ N S+P G FD LTNLQ LSLS N
Sbjct: 139 NTNQLQSIPAGAFDKLTNLQTLSLSTN 165
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 63/157 (40%), Gaps = 28/157 (17%)
Query: 163 TSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQL 222
T LT L +D + L FD + L L L+ NN SLP
Sbjct: 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA-NNQLASLP------------------ 99
Query: 223 GLSGTLDVLSGMTQLRQVWLHKNQFTG-PIPDLSKCESLFDLSLRDNQLTGVVPASVISL 281
L V +TQL +++L NQ P + L +L L NQL + + L
Sbjct: 100 -----LGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKL 154
Query: 282 PALLNISLQNNKLQG-PYPLFP--SKVQKVSLDHNNF 315
L +SL N+LQ P+ F K+Q ++L N F
Sbjct: 155 TNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 89 LTQLETLSFQMNNI----AGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSL 144
LT+L+ L N + AGA L N LQ + L N SVP G FD L LQ ++L
Sbjct: 130 LTKLKELRLNTNQLQSIPAGAFDKLTN---LQTLSLSTNQLQSVPHGAFDRLGKLQTITL 186
Query: 145 SDN 147
N
Sbjct: 187 FGN 189
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 67/155 (43%), Gaps = 17/155 (10%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
I K+ E + M + + +L V+H LV L + V +Y+ G L
Sbjct: 76 ILKKKEEKHIMSERNV--------LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELF 127
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
HL L + R A ++A + YLHSL + ++RDLKP NIL+
Sbjct: 128 YHL----QRERCFLEPRARFYAA-EIASALGYLHSL---NIVYRDLKPENILLDSQGHIV 179
Query: 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGK 762
+ DFGL K + + T GT YLAPE K
Sbjct: 180 LTDFGLCKENIEHNSTTST-FCGTPEYLAPEVLHK 213
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T T
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 186
Query: 753 GYLAPE 758
Y APE
Sbjct: 187 WYRAPE 192
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 35 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 90
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 91 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 146
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y+ E T Y APE
Sbjct: 147 GAIKLADFGLARAFGVPVRTYTHEV---VTLWYRAPE 180
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
K KR ++ + + E+++L +++H +++ L N ++ +L+ E + G
Sbjct: 40 AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGG 99
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-- 722
L L E LT ++ + GV YLHSL H DLKP NI++ D
Sbjct: 100 ELFDFLAEKES-----LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRN 151
Query: 723 --DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
R K+ DFGL G + GT ++APE
Sbjct: 152 VPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPE 187
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 83
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 84 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS---HRVLHRDLKPQNLLINTE 139
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y+ E T Y APE
Sbjct: 140 GAIKLADFGLARAFGVPVRTYTHEV---VTLWYRAPE 173
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 29 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 84
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 85 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 140
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y+ E T Y APE
Sbjct: 141 GAIKLADFGLARAFGVPVRTYTHEV---VTLWYRAPE 174
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 35 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 90
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 91 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 146
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y+ E T Y APE
Sbjct: 147 GAIKLADFGLARAFGVPVRTYTHEV---VTLWYRAPE 180
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 83
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 84 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 139
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y+ E T Y APE
Sbjct: 140 GAIKLADFGLARAFGVPVRTYTHEV---VTLWYRAPE 173
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 13/152 (8%)
Query: 609 AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRGTLA 667
A+K ++ T+ + + E +L +V H +V L Y +L L+ +++ G L
Sbjct: 56 AMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLF 114
Query: 668 QHLFEWHDHGYTPLTWKQRVTIAL-DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
L + ++ V L ++A +++LHSL I+RDLKP NIL+ ++
Sbjct: 115 TRL------SKEVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHI 165
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ DFGL K + D + + GT Y+APE
Sbjct: 166 KLTDFGLSKESIDHEKKAYS-FCGTVEYMAPE 196
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 83
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 84 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 139
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y+ E T Y APE
Sbjct: 140 GAIKLADFGLARAFGVPVRTYTHEV---VTLWYRAPE 173
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 27 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 82
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 83 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 138
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y+ E T Y APE
Sbjct: 139 GAIKLADFGLARAFGVPVRTYTHEV---VTLWYRAPE 172
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 83
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 84 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 139
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y+ E T Y APE
Sbjct: 140 GAIKLADFGLARAFGVPVRTYTHEV---VTLWYRAPE 173
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 13/152 (8%)
Query: 609 AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRGTLA 667
A+K ++ T+ + + E +L +V H +V L Y +L L+ +++ G L
Sbjct: 56 AMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLF 114
Query: 668 QHLFEWHDHGYTPLTWKQRVTIAL-DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
L + ++ V L ++A +++LHSL I+RDLKP NIL+ ++
Sbjct: 115 TRL------SKEVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHI 165
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ DFGL K + D + + GT Y+APE
Sbjct: 166 KLTDFGLSKESIDHEKKAYS-FCGTVEYMAPE 196
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 27 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 82
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 83 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 138
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y+ E T Y APE
Sbjct: 139 GAIKLADFGLARAFGVPVRTYTHEV---VTLWYRAPE 172
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 76/177 (42%), Gaps = 36/177 (20%)
Query: 605 GTKIAVKRMESNTMGNKGLSEF----QAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660
G +AVKRM L +F EI +LT+ H + YC ++R L
Sbjct: 39 GRPVAVKRM---------LIDFCDIALMEIKLLTE-SDDHPNVIRYYCSETTDRFLYIAL 88
Query: 661 MPRGTLAQHLFEWHDHGYTPLTWKQR---VTIALDVARGVEYLHSLAQQSFIHRDLKPSN 717
Q L E + L ++ +++ +A GV +LHSL IHRDLKP N
Sbjct: 89 ELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQN 145
Query: 718 ILI-------------GDDMRAKVADFGLVKNAPDGKYSVETRL---AGTFGYLAPE 758
IL+ +++R ++DFGL K G+ L +GT G+ APE
Sbjct: 146 ILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPE 202
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG----FVATR 186
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 187 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 212
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 13/152 (8%)
Query: 609 AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRGTLA 667
A+K ++ T+ + + E +L +V H +V L Y +L L+ +++ G L
Sbjct: 57 AMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLF 115
Query: 668 QHLFEWHDHGYTPLTWKQRVTIAL-DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
L + ++ V L ++A +++LHSL I+RDLKP NIL+ ++
Sbjct: 116 TRL------SKEVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHI 166
Query: 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ DFGL K + D + + GT Y+APE
Sbjct: 167 KLTDFGLSKESIDHEKKAYS-FCGTVEYMAPE 197
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 19/164 (11%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-------LV 657
G ++A+K+ + K + EI ++ K+ H ++V+ +G ++L L
Sbjct: 40 GEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSA-REVPDGLQKLAPNDLPLLA 97
Query: 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSN 717
EY G L ++L ++ + L T+ D++ + YLH + IHRDLKP N
Sbjct: 98 MEYCEGGDLRKYLNQFEN--CCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPEN 152
Query: 718 ILIG---DDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
I++ + K+ D G K G+ E GT YLAPE
Sbjct: 153 IVLQPGPQRLIHKIIDLGYAKELDQGELCTE--FVGTLQYLAPE 194
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 19/164 (11%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-------LV 657
G ++A+K+ + K + EI ++ K+ H ++V+ +G ++L L
Sbjct: 39 GEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSA-REVPDGLQKLAPNDLPLLA 96
Query: 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSN 717
EY G L ++L ++ + L T+ D++ + YLH + IHRDLKP N
Sbjct: 97 MEYCEGGDLRKYLNQFEN--CCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPEN 151
Query: 718 ILIG---DDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
I++ + K+ D G K G+ E GT YLAPE
Sbjct: 152 IVLQPGPQRLIHKIIDLGYAKELDQGELCTE--FVGTLQYLAPE 193
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLK 714
V EY+ G L H+ H + T+ A ++ G+++LHS + ++RDLK
Sbjct: 95 FFVMEYLNGGDLMYHIQSCHKFDLSRATF-----YAAEIILGLQFLHS---KGIVYRDLK 146
Query: 715 PSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
NIL+ D K+ADFG+ K G GT Y+APE
Sbjct: 147 LDNILLDKDGHIKIADFGMCKENMLGDAKT-NEFCGTPDYIAPE 189
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ D+GL ++ D T T
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEM----TGYVATR 186
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 187 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 212
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 32 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 87
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 88 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 143
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y+ E T Y APE
Sbjct: 144 GAIKLADFGLARAFGVPVRTYTHEV---VTLWYRAPE 177
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 54/136 (39%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHL------FEWHDHGYTPLT 682
E +L V L L + S +V EY P G + HL E H Y
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFY---- 147
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N++I KV DFG K +
Sbjct: 148 -------AAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW 197
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 198 X----LCGTPEYLAPE 209
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG----FVATR 186
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 187 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 212
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 602 LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYM 661
L K KR + E + E+++L +V H +++ L N ++ +L+ E +
Sbjct: 38 LEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELV 97
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L L + L+ ++ + + GV YLH+ + H DLKP NI++
Sbjct: 98 SGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLL 149
Query: 722 DDM----RAKVADFGLVKNAPDGKYSVETR-LAGTFGYLAPE 758
D K+ DFGL DG VE + + GT ++APE
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPE 188
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRV 687
E VL RH L AL Y +RL V EY G L HL T ++
Sbjct: 55 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERAR 108
Query: 688 TIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA-PDGKYSVET 746
++ +EYLHS + ++RD+K N+++ D K+ DFGL K DG +
Sbjct: 109 FYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--ATMK 163
Query: 747 RLAGTFGYLAPE 758
GT YLAPE
Sbjct: 164 XFCGTPEYLAPE 175
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 56/136 (41%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+ G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAPE 758
LAGT YLAPE
Sbjct: 197 X----LAGTPEYLAPE 208
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 17/164 (10%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G ++AVK ++ + + L + E+ + + H ++V L LV EY G
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGG 98
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724
+ +L HG K+ + V+Y H Q+ +HRDLK N+L+ D
Sbjct: 99 EVFDYLVA---HGRX--KEKEARAKFRQIVSAVQYCH---QKFIVHRDLKAENLLLDADX 150
Query: 725 RAKVADFGLVKNAPDGKYSVETRLAGTFG---YLAPE-YAGKHW 764
K+ADFG +++ +L G Y APE + GK +
Sbjct: 151 NIKIADFGF-----SNEFTFGNKLDAFCGAPPYAAPELFQGKKY 189
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 55/136 (40%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY P G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N++I +V DFG K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 197 X----LCGTPEYLAPE 208
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T
Sbjct: 157 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGY----VATR 209
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 210 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 235
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 83
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 84 -LHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPENLLINTE 139
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y E T Y APE
Sbjct: 140 GAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPE 173
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 602 LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYM 661
L K KR + E + E+++L +V H +++ L N ++ +L+ E +
Sbjct: 38 LEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELV 97
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L L + L+ ++ + + GV YLH+ + H DLKP NI++
Sbjct: 98 SGGELFDFLAQKE-----SLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLL 149
Query: 722 DDM----RAKVADFGLVKNAPDGKYSVETR-LAGTFGYLAPE 758
D K+ DFGL DG VE + + GT ++APE
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPE 188
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRV 687
E VL RH L AL Y +RL V EY G L HL T ++
Sbjct: 55 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRER-----VFTEERAR 108
Query: 688 TIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA-PDGKYSVET 746
++ +EYLHS + ++RD+K N+++ D K+ DFGL K DG +
Sbjct: 109 FYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--ATMK 163
Query: 747 RLAGTFGYLAPE 758
GT YLAPE
Sbjct: 164 XFCGTPEYLAPE 175
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRV 687
E VL RH L AL Y +RL V EY G L HL T ++
Sbjct: 60 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERAR 113
Query: 688 TIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA-PDGKYSVET 746
++ +EYLHS + ++RD+K N+++ D K+ DFGL K DG +
Sbjct: 114 FYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--ATMK 168
Query: 747 RLAGTFGYLAPE 758
GT YLAPE
Sbjct: 169 XFCGTPEYLAPE 180
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 602 LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYM 661
L K KR + E + E+++L +V H +++ L N ++ +L+ E +
Sbjct: 38 LEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELV 97
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L L + L+ ++ + + GV YLH+ + H DLKP NI++
Sbjct: 98 SGGELFDFLAQKES-----LSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLL 149
Query: 722 DDM----RAKVADFGLVKNAPDGKYSVETR-LAGTFGYLAPE 758
D K+ DFGL DG VE + + GT ++APE
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPE 188
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T
Sbjct: 130 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG----FVATR 182
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 183 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 208
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRV 687
E VL RH L AL Y +RL V EY G L HL T ++
Sbjct: 55 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRER-----VFTEERAR 108
Query: 688 TIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA-PDGKYSVET 746
++ +EYLHS + ++RD+K N+++ D K+ DFGL K DG +
Sbjct: 109 FYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--ATMK 163
Query: 747 RLAGTFGYLAPE 758
GT YLAPE
Sbjct: 164 XFCGTPEYLAPE 175
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 602 LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYM 661
L K KR + E + E+++L +V H +++ L N ++ +L+ E +
Sbjct: 38 LEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELV 97
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L L + L+ ++ + + GV YLH+ + H DLKP NI++
Sbjct: 98 SGGELFDFLAQKE-----SLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLL 149
Query: 722 DDM----RAKVADFGLVKNAPDGKYSVETR-LAGTFGYLAPE 758
D K+ DFGL DG VE + + GT ++APE
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPE 188
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 76/177 (42%), Gaps = 36/177 (20%)
Query: 605 GTKIAVKRMESNTMGNKGLSEF----QAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660
G +AVKRM L +F EI +LT+ H + YC ++R L
Sbjct: 57 GRPVAVKRM---------LIDFCDIALMEIKLLTE-SDDHPNVIRYYCSETTDRFLYIAL 106
Query: 661 MPRGTLAQHLFEWHDHGYTPLTWKQR---VTIALDVARGVEYLHSLAQQSFIHRDLKPSN 717
Q L E + L ++ +++ +A GV +LHSL IHRDLKP N
Sbjct: 107 ELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQN 163
Query: 718 ILI-------------GDDMRAKVADFGLVKNAPDGKYSVETRL---AGTFGYLAPE 758
IL+ +++R ++DFGL K G+ L +GT G+ APE
Sbjct: 164 ILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPE 220
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 602 LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYM 661
L K KR + E + E+++L +V H +++ L N ++ +L+ E +
Sbjct: 38 LEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELV 97
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L L + L+ ++ + + GV YLH+ + H DLKP NI++
Sbjct: 98 SGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLL 149
Query: 722 DDM----RAKVADFGLVKNAPDGKYSVETR-LAGTFGYLAPE 758
D K+ DFGL DG VE + + GT ++APE
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPE 188
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 56/136 (41%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+ G + HL E H Y
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY---- 167
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 168 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATW 217
Query: 743 SVETRLAGTFGYLAPE 758
+ L GT YLAPE
Sbjct: 218 T----LCGTPEYLAPE 229
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 8/137 (5%)
Query: 604 DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663
D T +AVK T+ ++F E +L + H ++V L+G C +V E +
Sbjct: 138 DNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQG 196
Query: 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
G L G L K + + D A G+EYL S + IHRDL N L+ +
Sbjct: 197 GDFLTFL---RTEG-ARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEK 249
Query: 724 MRAKVADFGLVKNAPDG 740
K++DFG+ + DG
Sbjct: 250 NVLKISDFGMSREEADG 266
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 31 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 86
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 87 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 142
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y E T Y APE
Sbjct: 143 GAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPE 176
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 30 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 85
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 86 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 141
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y E T Y APE
Sbjct: 142 GAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPE 175
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 27/161 (16%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K++ E+ ++ V H+++++LL + P+ TL
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV------------FTPQKTLE 99
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVAR----------GVEYLHSLAQQSFIHRDLKPSN 717
+ + Q + + LD R G+++LHS IHRDLKPSN
Sbjct: 100 EFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 156
Query: 718 ILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
I++ D K+ DFGL + A G + T T Y APE
Sbjct: 157 IVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 195
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 27/161 (16%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K++ E+ ++ V H+++++LL + P+ TL
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV------------FTPQKTLE 99
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVAR----------GVEYLHSLAQQSFIHRDLKPSN 717
+ + Q + + LD R G+++LHS IHRDLKPSN
Sbjct: 100 EFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSN 156
Query: 718 ILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
I++ D K+ DFGL + A G + T T Y APE
Sbjct: 157 IVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 195
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 8/82 (9%)
Query: 680 PLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA-- 737
P+T + ++ + VARG+E+L S + IHRDL NIL+ ++ K+ DFGL ++
Sbjct: 195 PITMEDLISYSFQVARGMEFLSS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYK 251
Query: 738 -PDGKYSVETRLAGTFGYLAPE 758
PD +TRL ++APE
Sbjct: 252 NPDYVRKGDTRLP--LKWMAPE 271
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 13/153 (8%)
Query: 609 AVKRMESNTMGNKGLSEFQAEIAVLTKVRHR--HLVALLGYCINGSERLLVYEYMPRGTL 666
A+K + N+ L ++ EIA L K++ ++ L Y I +Y M G +
Sbjct: 84 AIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNI 140
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
L W + W+++ +E +H++ Q +H DLKP+N LI D M
Sbjct: 141 D--LNSWLKKKKSIDPWERKSYWK----NMLEAVHTIHQHGIVHSDLKPANFLIVDGM-L 193
Query: 727 KVADFGLVKN-APDGKYSVETRLAGTFGYLAPE 758
K+ DFG+ PD V+ G Y+ PE
Sbjct: 194 KLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPE 226
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 32 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 87
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 88 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 143
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y E T Y APE
Sbjct: 144 GAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPE 177
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLK 714
V EY+ G L H+ H + T+ A ++ G+++LHS + ++RDLK
Sbjct: 94 FFVMEYLNGGDLMYHIQSCHKFDLSRATF-----YAAEIILGLQFLHS---KGIVYRDLK 145
Query: 715 PSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
NIL+ D K+ADFG+ K G GT Y+APE
Sbjct: 146 LDNILLDKDGHIKIADFGMCKENMLGDAKT-NXFCGTPDYIAPE 188
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 695 RGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGY 754
RG++Y+HS IHRDLKPSN+ + +D ++ DFGL + A + T T Y
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEM----TGYVATRWY 186
Query: 755 LAPEYAGKHWMILCQMTGLIWLHGSV 780
APE +WM Q IW G +
Sbjct: 187 RAPEIM-LNWMHYNQTVD-IWSVGCI 210
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 29 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 84
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 85 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 140
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y E T Y APE
Sbjct: 141 GAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPE 174
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 13/161 (8%)
Query: 623 LSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLT 682
+ + +AEI VL + H +++ + + +V E G L + + G L+
Sbjct: 64 MEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARG-KALS 122
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD---DMRAKVADFGLVKNAPD 739
+ + + Y HS Q +H+DLKP NIL D K+ DFGL +
Sbjct: 123 EGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS 179
Query: 740 GKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780
++S T AGT Y+APE + C IW G V
Sbjct: 180 DEHS--TNAAGTALYMAPEVFKRDVTFKCD----IWSAGVV 214
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 31 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 86
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 87 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 142
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y E T Y APE
Sbjct: 143 GAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPE 176
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 12/152 (7%)
Query: 609 AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRGTLA 667
A+K + M + S F E + + V L Y L +V EYMP G L
Sbjct: 103 AMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV 162
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+ + P W + T +V ++ +HS+ FIHRD+KP N+L+ K
Sbjct: 163 NLMSNYD----VPEKWARFYTA--EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLK 213
Query: 728 VADFG-LVKNAPDGKYSVETRLAGTFGYLAPE 758
+ADFG +K +G +T + GT Y++PE
Sbjct: 214 LADFGTCMKMNKEGMVRCDTAV-GTPDYISPE 244
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 83
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 84 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 139
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y E T Y APE
Sbjct: 140 GAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPE 173
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 62 CDNSNRVTTISLAKSGLSG----TLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQD 117
C + + TISL LS T+S L QLE L FQ +N+ + + SL++
Sbjct: 388 CCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLRN 446
Query: 118 -IYLD-NNNFTSVP-TGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNAN 174
IYLD ++ T V G F+GL++L+VL ++ N + P+ T+ +LT L +
Sbjct: 447 LIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF-LPDIFTELRNLTFLDLSQCQ 505
Query: 175 IFGLIPDFFDSFSNLQNLRLSYNNF 199
+ L P F+S S+LQ L +S+NNF
Sbjct: 506 LEQLSPTAFNSLSSLQVLNMSHNNF 530
Score = 29.3 bits (64), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 104 GAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWP-FPNELTKS 162
GA SL++ ++L L N S+ G F GL++LQ L ++ NLA FP K+
Sbjct: 94 GAYQSLSHLSTL---ILTGNPIQSLALGAFSGLSSLQKL-VAVETNLASLENFPIGHLKT 149
Query: 163 TSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYN 197
+ + F L P++F + +NL++L LS N
Sbjct: 150 LKELNVAHNLIQSFKL-PEYFSNLTNLEHLDLSSN 183
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 12/152 (7%)
Query: 609 AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRGTLA 667
A+K + M + S F E + + V L Y L +V EYMP G L
Sbjct: 98 AMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV 157
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+ + P W + T +V ++ +HS+ FIHRD+KP N+L+ K
Sbjct: 158 NLMSNYD----VPEKWARFYTA--EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLK 208
Query: 728 VADFG-LVKNAPDGKYSVETRLAGTFGYLAPE 758
+ADFG +K +G +T + GT Y++PE
Sbjct: 209 LADFGTCMKMNKEGMVRCDTAV-GTPDYISPE 239
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 54/136 (39%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V L L + S +V EY P G + HL E H Y
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY---- 147
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N++I KV DFG K +
Sbjct: 148 -------AAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW 197
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 198 X----LCGTPEYLAPE 209
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 27/161 (16%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K++ E+ ++ V H+++++LL + P+ TL
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLE 137
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVAR----------GVEYLHSLAQQSFIHRDLKPSN 717
+ + Q + + LD R G+++LHS IHRDLKPSN
Sbjct: 138 EFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 194
Query: 718 ILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
I++ D K+ DFGL + A G + T T Y APE
Sbjct: 195 IVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 233
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 30 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 85
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 86 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPENLLINTE 141
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y E T Y APE
Sbjct: 142 GAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPE 175
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 27 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 82
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 83 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 138
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y E T Y APE
Sbjct: 139 GAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPE 172
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DFGL ++ D T
Sbjct: 154 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGX----VATR 206
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 207 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 232
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 54/136 (39%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V L L + S +V EY P G + HL E H Y
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY---- 147
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N++I KV DFG K +
Sbjct: 148 -------AAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW 197
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 198 X----LCGTPEYLAPE 209
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 83
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 84 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 139
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y E T Y APE
Sbjct: 140 GAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPE 173
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 76/177 (42%), Gaps = 36/177 (20%)
Query: 605 GTKIAVKRMESNTMGNKGLSEF----QAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660
G +AVKRM L +F EI +LT+ H + YC ++R L
Sbjct: 57 GRPVAVKRM---------LIDFCDIALMEIKLLTE-SDDHPNVIRYYCSETTDRFLYIAL 106
Query: 661 MPRGTLAQHLFEWHDHGYTPLTWKQR---VTIALDVARGVEYLHSLAQQSFIHRDLKPSN 717
Q L E + L ++ +++ +A GV +LHSL IHRDLKP N
Sbjct: 107 ELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQN 163
Query: 718 ILI-------------GDDMRAKVADFGLVKNAPDGKYSVETRL---AGTFGYLAPE 758
IL+ +++R ++DFGL K G+ L +GT G+ APE
Sbjct: 164 ILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPE 220
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 83
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 84 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 139
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y E T Y APE
Sbjct: 140 GAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPE 173
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 30 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 85
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 86 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 141
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y E T Y APE
Sbjct: 142 GAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPE 175
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 83
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 84 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 139
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y E T Y APE
Sbjct: 140 GAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPE 173
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 12/152 (7%)
Query: 609 AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRGTLA 667
A+K + M + S F E + + V L Y L +V EYMP G L
Sbjct: 103 AMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV 162
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
+ + P W + T +V ++ +HS+ FIHRD+KP N+L+ K
Sbjct: 163 NLMSNYD----VPEKWARFYTA--EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLK 213
Query: 728 VADFG-LVKNAPDGKYSVETRLAGTFGYLAPE 758
+ADFG +K +G +T + GT Y++PE
Sbjct: 214 LADFGTCMKMNKEGMVRCDTAV-GTPDYISPE 244
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 29 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 84
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 85 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPENLLINTE 140
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y E T Y APE
Sbjct: 141 GAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPE 174
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 27 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 82
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 83 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 138
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y E T Y APE
Sbjct: 139 GAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPE 172
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 695 RGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGY 754
RG++Y+HS IHRDLKPSN+ + +D ++ DFGL + A + T T Y
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEM----TGYVATRWY 194
Query: 755 LAPEYAGKHWMILCQMTGLIWLHGSV 780
APE +WM Q IW G +
Sbjct: 195 RAPEIM-LNWMHYNQTVD-IWSVGCI 218
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 10/141 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+KR+ + S EI +L +++H+++V L + + LV+E+
Sbjct: 30 VALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC-----D 84
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
Q L ++ D L + + + +G+ + HS ++ +HRDLKP N+LI + K
Sbjct: 85 QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELK 141
Query: 728 VADFGLVK--NAPDGKYSVET 746
+ADFGL + P YS E
Sbjct: 142 LADFGLARAFGIPVRCYSAEV 162
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 19/137 (13%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGSER--LLVYEYM 661
G +AVK++ + EI +LT++ H ++V LL ++R LV++YM
Sbjct: 34 GEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93
Query: 662 P---RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
+ ++ E P+ KQ V L + ++YLHS +HRD+KPSNI
Sbjct: 94 ETDLHAVIRANILE-------PVH-KQYVVYQL--IKVIKYLHS---GGLLHRDMKPSNI 140
Query: 719 LIGDDMRAKVADFGLVK 735
L+ + KVADFGL +
Sbjct: 141 LLNAECHVKVADFGLSR 157
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 39/81 (48%), Gaps = 14/81 (17%)
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN-----------A 737
I + +A VE+LHS + +HRDLKPSNI D KV DFGLV
Sbjct: 169 IFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 738 PDGKYSVETRLAGTFGYLAPE 758
P Y+ GT Y++PE
Sbjct: 226 PMPAYATHXGQVGTKLYMSPE 246
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 695 RGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGY 754
RG++Y+HS IHRDLKPSN+ + +D ++ DFGL + A + T T Y
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEM----TGYVATRWY 194
Query: 755 LAPEYAGKHWMILCQMTGLIWLHGSV 780
APE +WM Q IW G +
Sbjct: 195 RAPEIM-LNWMHYNQTVD-IWSVGCI 218
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 10/130 (7%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
E+ ++ + H LV L + + +V + + G L HL + +K+ T
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL-------QQNVHFKEE-T 116
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRL 748
+ L + V L L Q IHRD+KP NIL+ + + DF + P + + T +
Sbjct: 117 VKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP--RETQITTM 174
Query: 749 AGTFGYLAPE 758
AGT Y+APE
Sbjct: 175 AGTKPYMAPE 184
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 29 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 84
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 85 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 140
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y E T Y APE
Sbjct: 141 GAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPE 174
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 79/185 (42%), Gaps = 29/185 (15%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCI------NGSERLLVY 658
G +AVK++ E+ +L V H+++++LL + LV
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIAL-DVARGVEYLHSLAQQSFIHRDLKPSN 717
E M L Q + DH +R++ L + G+++LHS IHRDLKPSN
Sbjct: 109 ELMD-ANLCQVIHMELDH--------ERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSN 156
Query: 718 ILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE------YAG--KHWMILCQ 769
I++ D K+ DFGL + A + T T Y APE YA W + C
Sbjct: 157 IVVKSDCTLKILDFGLARTACTN--FMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCI 214
Query: 770 MTGLI 774
M L+
Sbjct: 215 MGELV 219
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Query: 625 EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWK 684
E AE V+ ++ + ++V ++G C +LV E G L ++L + + H + K
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ-NRH----VKDK 111
Query: 685 QRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK--NAPDGKY 742
+ + V+ G++YL + +F+HRDL N+L+ AK++DFGL K A + Y
Sbjct: 112 NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXY 168
Query: 743 SVETRLAGTFGYLAPE 758
+T + APE
Sbjct: 169 KAQTHGKWPVKWYAPE 184
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 68/158 (43%), Gaps = 23/158 (14%)
Query: 609 AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQ 668
AVK + + NK S E+ +L K+ H +++ L + S +V E G L
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFD 110
Query: 669 HL-----FEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI--- 720
+ F HD I V G+ Y+H + + +HRDLKP NIL+
Sbjct: 111 EIIKRKRFSEHDAA----------RIIKQVFSGITYMH---KHNIVHRDLKPENILLESK 157
Query: 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
D K+ DFGL ++ R+ GT Y+APE
Sbjct: 158 EKDCDIKIIDFGL-STCFQQNTKMKDRI-GTAYYIAPE 193
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 18/158 (11%)
Query: 616 NTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHD 675
+T + L ++ EI +L H ++V LL + ++ E+ G + + E
Sbjct: 71 DTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE- 129
Query: 676 HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735
PLT Q + + YLH IHRDLK NIL D K+ADFG+
Sbjct: 130 ---RPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGV-- 181
Query: 736 NAPDGKYSVETR--LAGTFGYLAPEYAGKHWMILCQMT 771
+ +++ R GT ++APE +++C+ +
Sbjct: 182 -SAKNTRTIQRRDSFIGTPYWMAPE------VVMCETS 212
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 93 ETLSFQMNNIAG-AIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLA 151
E L Q +A + + T L + LD N ++ G FD LT L L L++N LA
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANN-QLA 96
Query: 152 PWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPA-SFAK- 209
P T L LY+ + L FD + L+ LRL+ N S+PA +F K
Sbjct: 97 SLPL-GVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKL 154
Query: 210 SDIQNLWMNDQQLGL--SGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLF 261
+++Q L ++ QL G D L +L+ + L NQF D S+CE L+
Sbjct: 155 TNLQTLSLSTNQLQSVPHGAFDRLG---KLQTITLFGNQF-----DCSRCEILY 200
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 63 DNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPS--LANATSLQDIYL 120
D+ + T+ LA + L+ LTQL+ L N + ++PS T L+++ L
Sbjct: 80 DDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRL 138
Query: 121 DNNNFTSVPTGCFDGLTNLQVLSLSDN 147
+ N S+P G FD LTNLQ LSLS N
Sbjct: 139 NTNQLQSIPAGAFDKLTNLQTLSLSTN 165
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 63/157 (40%), Gaps = 28/157 (17%)
Query: 163 TSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQL 222
T LT L +D + L FD + L L L+ NN SLP
Sbjct: 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA-NNQLASLP------------------ 99
Query: 223 GLSGTLDVLSGMTQLRQVWLHKNQFTG-PIPDLSKCESLFDLSLRDNQLTGVVPASVISL 281
L V +TQL +++L NQ P + L +L L NQL + + L
Sbjct: 100 -----LGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKL 154
Query: 282 PALLNISLQNNKLQG-PYPLFP--SKVQKVSLDHNNF 315
L +SL N+LQ P+ F K+Q ++L N F
Sbjct: 155 TNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 89 LTQLETLSFQMNNI----AGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSL 144
LT+L+ L N + AGA L N LQ + L N SVP G FD L LQ ++L
Sbjct: 130 LTKLKELRLNTNQLQSIPAGAFDKLTN---LQTLSLSTNQLQSVPHGAFDRLGKLQTITL 186
Query: 145 SDN 147
N
Sbjct: 187 FGN 189
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
E+++L ++H ++V L LV+EY+ + L Q+L D +
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKD-LKQYL----DDCGNIINMHNVKL 104
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGL--VKNAPDGKYSVET 746
+ RG+ Y H +Q +HRDLKP N+LI + K+ADFGL K+ P Y E
Sbjct: 105 FLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEV 161
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 56/136 (41%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+ G + HL E H Y
Sbjct: 78 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY---- 133
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI + +V DFG K +
Sbjct: 134 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTW 183
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 184 X----LCGTPEYLAPE 195
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 27/161 (16%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K++ E+ ++ V H+++++LL + P+ TL
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLE 99
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVAR----------GVEYLHSLAQQSFIHRDLKPSN 717
+ + Q + + LD R G+++LHS IHRDLKPSN
Sbjct: 100 EFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSN 156
Query: 718 ILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
I++ D K+ DFGL + A G + T T Y APE
Sbjct: 157 IVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 195
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 31 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 86
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L + D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 87 -LHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 142
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y E T Y APE
Sbjct: 143 GAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPE 176
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 69/153 (45%), Gaps = 16/153 (10%)
Query: 608 IAVKRME-SNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K+M S N+ + E+ L K+RH + + G + LV EY G+
Sbjct: 82 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGS- 139
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
A L E H PL + + +G+ YLHS + IHRD+K NIL+ +
Sbjct: 140 ASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLV 193
Query: 727 KVADFGLVK-NAPDGKYSVETRLAGTFGYLAPE 758
K+ DFG AP + GT ++APE
Sbjct: 194 KLGDFGSASIMAPANXF------VGTPYWMAPE 220
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 65/139 (46%), Gaps = 26/139 (18%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRV 687
E VL RH L AL Y +RL V EY G L HL ++RV
Sbjct: 201 ENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLS------------RERV 247
Query: 688 TIALDVAR--------GVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739
+ D AR ++YLHS +++ ++RDLK N+++ D K+ DFGL K
Sbjct: 248 -FSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 304
Query: 740 GKYSVETRLAGTFGYLAPE 758
+++T GT YLAPE
Sbjct: 305 DGATMKT-FCGTPEYLAPE 322
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 27/161 (16%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K++ E+ ++ V H+++++LL + P+ TL
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLE 137
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVAR----------GVEYLHSLAQQSFIHRDLKPSN 717
+ + Q + + LD R G+++LHS IHRDLKPSN
Sbjct: 138 EFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 194
Query: 718 ILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
I++ D K+ DFGL + A G + T T Y APE
Sbjct: 195 IVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 233
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 28/185 (15%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCI------NGSERLLVY 658
G K+A+K++ E+ +L +RH +++ LL + ++ LV
Sbjct: 50 GAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVM 109
Query: 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
+M GT L + G + + + + +G+ Y+H+ IHRDLKP N+
Sbjct: 110 PFM--GTDLGKLMKHEKLGEDRIQF-----LVYQMLKGLRYIHA---AGIIHRDLKPGNL 159
Query: 719 LIGDDMRAKVADFGLVKNAPDGKYSVETRLAG---TFGYLAPEYAGKHWMILCQMTGLIW 775
+ +D K+ DFGL + A ++ + G T Y APE +WM Q IW
Sbjct: 160 AVNEDCELKILDFGLARQA-------DSEMXGXVVTRWYRAPEVI-LNWMRYTQTVD-IW 210
Query: 776 LHGSV 780
G +
Sbjct: 211 SVGCI 215
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 626 FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQ 685
+ EI + + H ++V G+ G+ + L EY G L + D G P Q
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIG-MPEPDAQ 107
Query: 686 RVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVE 745
R L GV YLH + HRD+KP N+L+ + K++DFGL A +Y+
Sbjct: 108 RFFHQL--MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGL---ATVFRYNNR 159
Query: 746 TRL----AGTFGYLAPE 758
RL GT Y+APE
Sbjct: 160 ERLLNKMCGTLPYVAPE 176
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 627 QAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQR 686
+ EI +L K+ H ++ + + + + +V E M G L + G L
Sbjct: 202 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV-----GNKRLKEATC 255
Query: 687 VTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG---DDMRAKVADFGLVKNAPDGKYS 743
+ V+YLH + IHRDLKP N+L+ +D K+ DFG K G+ S
Sbjct: 256 KLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETS 310
Query: 744 VETRLAGTFGYLAPEY------AGKHWMILCQMTGLI 774
+ L GT YLAPE AG + + C G+I
Sbjct: 311 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 347
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 27/161 (16%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K++ E+ ++ V H+++++LL + P+ TL
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV------------FTPQKTLE 99
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVAR----------GVEYLHSLAQQSFIHRDLKPSN 717
+ + Q + + LD R G+++LHS IHRDLKPSN
Sbjct: 100 EFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSN 156
Query: 718 ILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
I++ D K+ DFGL + A G + T T Y APE
Sbjct: 157 IVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 195
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 626 FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQ 685
+ EI + + H ++V G+ G+ + L EY G L + D G P Q
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIG-MPEPDAQ 108
Query: 686 RVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVE 745
R L GV YLH + HRD+KP N+L+ + K++DFGL A +Y+
Sbjct: 109 RFFHQL--MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGL---ATVFRYNNR 160
Query: 746 TRL----AGTFGYLAPE 758
RL GT Y+APE
Sbjct: 161 ERLLNKMCGTLPYVAPE 177
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 65/139 (46%), Gaps = 26/139 (18%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRV 687
E VL RH L AL Y +RL V EY G L HL ++RV
Sbjct: 198 ENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLS------------RERV 244
Query: 688 TIALDVAR--------GVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739
+ D AR ++YLHS +++ ++RDLK N+++ D K+ DFGL K
Sbjct: 245 -FSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301
Query: 740 GKYSVETRLAGTFGYLAPE 758
+++T GT YLAPE
Sbjct: 302 DGATMKT-FCGTPEYLAPE 319
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 627 QAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQR 686
+ EI +L K+ H ++ + + + + +V E M G L + G L
Sbjct: 188 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV-----GNKRLKEATC 241
Query: 687 VTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG---DDMRAKVADFGLVKNAPDGKYS 743
+ V+YLH + IHRDLKP N+L+ +D K+ DFG K G+ S
Sbjct: 242 KLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETS 296
Query: 744 VETRLAGTFGYLAPEY------AGKHWMILCQMTGLI 774
+ L GT YLAPE AG + + C G+I
Sbjct: 297 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 333
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 31 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 86
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L+ L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 87 -LSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 142
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y E T Y APE
Sbjct: 143 GAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPE 176
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 27/161 (16%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K++ E+ ++ V H+++++LL + P+ TL
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLE 92
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVAR----------GVEYLHSLAQQSFIHRDLKPSN 717
+ + Q + + LD R G+++LHS IHRDLKPSN
Sbjct: 93 EFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSN 149
Query: 718 ILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
I++ D K+ DFGL + A G + T T Y APE
Sbjct: 150 IVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 188
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Query: 625 EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWK 684
E AE V+ ++ + ++V ++G C +LV E G L ++L + + H + K
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ-NRH----VKDK 105
Query: 685 QRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK--NAPDGKY 742
+ + V+ G++YL + +F+HRDL N+L+ AK++DFGL K A + Y
Sbjct: 106 NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 162
Query: 743 SVETRLAGTFGYLAPE 758
+T + APE
Sbjct: 163 KAQTHGKWPVKWYAPE 178
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 21/161 (13%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCI------NGSERLLVY 658
G +AVK++ E+ +L V H+++++LL + LV
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 106
Query: 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIAL-DVARGVEYLHSLAQQSFIHRDLKPSN 717
E M L Q + DH +R++ L + G+++LHS IHRDLKPSN
Sbjct: 107 ELMD-ANLCQVIHMELDH--------ERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSN 154
Query: 718 ILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
I++ D K+ DFGL + A + T T Y APE
Sbjct: 155 IVVKSDCTLKILDFGLARTASTN--FMMTPYVVTRYYRAPE 193
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 13/135 (9%)
Query: 627 QAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQR 686
+ EI VL ++ H +++ L +E LV E + G L + E GY + +
Sbjct: 96 RTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVE---KGY--YSERDA 150
Query: 687 VTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD---DMRAKVADFGLVKNAPDGKYS 743
+ V YLH + +HRDLKP N+L D K+ADFGL K + +
Sbjct: 151 ADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV-EHQVL 206
Query: 744 VETRLAGTFGYLAPE 758
++T + GT GY APE
Sbjct: 207 MKT-VCGTPGYCAPE 220
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Query: 625 EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWK 684
E AE V+ ++ + ++V ++G C +LV E G L ++L + + H + K
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRH----VKDK 469
Query: 685 QRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK--NAPDGKY 742
+ + V+ G++YL + +F+HRDL N+L+ AK++DFGL K A + Y
Sbjct: 470 NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526
Query: 743 SVETRLAGTFGYLAPE 758
+T + APE
Sbjct: 527 KAQTHGKWPVKWYAPE 542
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 55/136 (40%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHL------FEWHDHGYTPLT 682
E +L V LV L + S +V EY+ G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 197 X----LCGTPEYLAPE 208
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 55/136 (40%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHL------FEWHDHGYTPLT 682
E +L V LV L + S +V EY+ G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 197 X----LCGTPEYLAPE 208
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 17/163 (10%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G + A K + + + + + + E + K++H ++V L S LV++ + G
Sbjct: 54 GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 113
Query: 665 TLAQHLF--EWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
L + + E++ +Q + + Y HS +HR+LKP N+L+
Sbjct: 114 ELFEDIVAREFYSEADASHCIQQ-------ILESIAYCHS---NGIVHRNLKPENLLLAS 163
Query: 723 DMRA---KVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGK 762
+ K+ADFGL D + AGT GYL+PE K
Sbjct: 164 KAKGAAVKLADFGLAIEVNDSE--AWHGFAGTPGYLSPEVLKK 204
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Query: 625 EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWK 684
E AE V+ ++ + ++V ++G C +LV E G L ++L + + H + K
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ-NRH----VKDK 111
Query: 685 QRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK--NAPDGKY 742
+ + V+ G++YL + +F+HRDL N+L+ AK++DFGL K A + Y
Sbjct: 112 NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 168
Query: 743 SVETRLAGTFGYLAPE 758
+T + APE
Sbjct: 169 KAQTHGKWPVKWYAPE 184
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 30 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 85
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L+ L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 86 -LSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 141
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y E T Y APE
Sbjct: 142 GAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPE 175
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Query: 625 EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWK 684
E AE V+ ++ + ++V ++G C +LV E G L ++L + + H + K
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRH----VKDK 127
Query: 685 QRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK--NAPDGKY 742
+ + V+ G++YL + +F+HRDL N+L+ AK++DFGL K A + Y
Sbjct: 128 NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 743 SVETRLAGTFGYLAPE 758
+T + APE
Sbjct: 185 KAQTHGKWPVKWYAPE 200
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 55/136 (40%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHL------FEWHDHGYTPLT 682
E +L V LV L + S +V EY+ G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 197 X----LCGTPEYLAPE 208
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Query: 625 EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWK 684
E AE V+ ++ + ++V ++G C +LV E G L ++L + + H + K
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRH----VKDK 127
Query: 685 QRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK--NAPDGKY 742
+ + V+ G++YL + +F+HRDL N+L+ AK++DFGL K A + Y
Sbjct: 128 NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 743 SVETRLAGTFGYLAPE 758
+T + APE
Sbjct: 185 KAQTHGKWPVKWYAPE 200
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Query: 625 EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWK 684
E AE V+ ++ + ++V ++G C +LV E G L ++L + + H + K
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ-NRH----VKDK 107
Query: 685 QRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK--NAPDGKY 742
+ + V+ G++YL + +F+HRDL N+L+ AK++DFGL K A + Y
Sbjct: 108 NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 164
Query: 743 SVETRLAGTFGYLAPE 758
+T + APE
Sbjct: 165 KAQTHGKWPVKWYAPE 180
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 55/136 (40%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHL------FEWHDHGYTPLT 682
E +L V LV L + S +V EY+ G + HL E H Y
Sbjct: 86 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY---- 141
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 142 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 191
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 192 X----LCGTPEYLAPE 203
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 31 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 86
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L+ L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 87 -LSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPENLLINTE 142
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y E T Y APE
Sbjct: 143 GAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPE 176
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Query: 625 EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWK 684
E AE V+ ++ + ++V ++G C +LV E G L ++L + + H + K
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRH----VKDK 470
Query: 685 QRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK--NAPDGKY 742
+ + V+ G++YL + +F+HRDL N+L+ AK++DFGL K A + Y
Sbjct: 471 NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 527
Query: 743 SVETRLAGTFGYLAPE 758
+T + APE
Sbjct: 528 KAQTHGKWPVKWYAPE 543
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Query: 625 EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWK 684
E AE V+ ++ + ++V ++G C +LV E G L ++L + + H + K
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRH----VKDK 125
Query: 685 QRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK--NAPDGKY 742
+ + V+ G++YL + +F+HRDL N+L+ AK++DFGL K A + Y
Sbjct: 126 NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 182
Query: 743 SVETRLAGTFGYLAPE 758
+T + APE
Sbjct: 183 KAQTHGKWPVKWYAPE 198
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 55/136 (40%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHL------FEWHDHGYTPLT 682
E +L V LV L + S +V EY+ G + HL E H Y
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY---- 167
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 168 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 217
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 218 X----LCGTPEYLAPE 229
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 18/158 (11%)
Query: 616 NTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHD 675
+T + L ++ EI +L H ++V LL + ++ E+ G + + E
Sbjct: 71 DTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE- 129
Query: 676 HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735
PLT Q + + YLH IHRDLK NIL D K+ADFG+
Sbjct: 130 ---RPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGV-- 181
Query: 736 NAPDGKYSVETR--LAGTFGYLAPEYAGKHWMILCQMT 771
+ ++ R GT ++APE +++C+ +
Sbjct: 182 -SAKNTRXIQRRDXFIGTPYWMAPE------VVMCETS 212
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 18/158 (11%)
Query: 616 NTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHD 675
+T + L ++ EI +L H ++V LL + ++ E+ G + + E
Sbjct: 71 DTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE- 129
Query: 676 HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735
PLT Q + + YLH IHRDLK NIL D K+ADFG+
Sbjct: 130 ---RPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGV-- 181
Query: 736 NAPDGKYSVETR--LAGTFGYLAPEYAGKHWMILCQMT 771
+ ++ R GT ++APE +++C+ +
Sbjct: 182 -SAKNTRXIQRRDSFIGTPYWMAPE------VVMCETS 212
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 18/163 (11%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN--GSERLLVYEYMP 662
G I VK ++ + +F E L H +++ +LG C + L+ +MP
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRD-LKPSNILIG 721
G+L L H+ + Q V ALD+ARG+ +LH+L + I R L +++I
Sbjct: 93 YGSLYNVL---HEGTNFVVDQSQAVKFALDMARGMAFLHTL--EPLIPRHALNSRSVMID 147
Query: 722 DDMRAKV--ADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGK 762
+DM A++ AD +P Y+ ++APE K
Sbjct: 148 EDMTARISMADVKFSFQSPGRMYAP--------AWVAPEALQK 182
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 29 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 84
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L+ L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 85 -LSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPENLLINTE 140
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y E T Y APE
Sbjct: 141 GAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPE 174
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 27/161 (16%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K++ E+ ++ V H+++++LL + P+ TL
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLE 100
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVAR----------GVEYLHSLAQQSFIHRDLKPSN 717
+ + Q + + LD R G+++LHS IHRDLKPSN
Sbjct: 101 EFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 157
Query: 718 ILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
I++ D K+ DFGL + A G + T T Y APE
Sbjct: 158 IVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 196
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 27/161 (16%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K++ E+ ++ V H+++++LL + P+ TL
Sbjct: 51 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLE 98
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVAR----------GVEYLHSLAQQSFIHRDLKPSN 717
+ + Q + + LD R G+++LHS IHRDLKPSN
Sbjct: 99 EFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 155
Query: 718 ILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
I++ D K+ DFGL + A G + T T Y APE
Sbjct: 156 IVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 194
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 27/161 (16%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K++ E+ ++ V H+++++LL + P+ TL
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLE 99
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVAR----------GVEYLHSLAQQSFIHRDLKPSN 717
+ + Q + + LD R G+++LHS IHRDLKPSN
Sbjct: 100 EFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 156
Query: 718 ILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
I++ D K+ DFGL + A G + T T Y APE
Sbjct: 157 IVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 195
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 27/161 (16%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K++ E+ ++ V H+++++LL + P+ TL
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLE 99
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVAR----------GVEYLHSLAQQSFIHRDLKPSN 717
+ + Q + + LD R G+++LHS IHRDLKPSN
Sbjct: 100 EFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 156
Query: 718 ILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
I++ D K+ DFGL + A G + T T Y APE
Sbjct: 157 IVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 195
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 55/136 (40%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+ G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 197 X----LCGTPEYLAPE 208
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 27/161 (16%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K++ E+ ++ V H+++++LL + P+ TL
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLE 100
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVAR----------GVEYLHSLAQQSFIHRDLKPSN 717
+ + Q + + LD R G+++LHS IHRDLKPSN
Sbjct: 101 EFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 157
Query: 718 ILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
I++ D K+ DFGL + A G + T T Y APE
Sbjct: 158 IVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 196
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Query: 625 EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWK 684
E AE V+ ++ + ++V ++G C +LV E G L ++L + + H + K
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRH----VKDK 117
Query: 685 QRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK--NAPDGKY 742
+ + V+ G++YL + +F+HRDL N+L+ AK++DFGL K A + Y
Sbjct: 118 NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 174
Query: 743 SVETRLAGTFGYLAPE 758
+T + APE
Sbjct: 175 KAQTHGKWPVKWYAPE 190
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 608 IAVKRMESNTMGNKGLSEFQA---EIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPR 663
+AVK ++ + L+E +A E+ VL+ + H ++V LLG C G L++ EY
Sbjct: 56 VAVKMLKPSA----HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCY 111
Query: 664 GTLAQHLFEWHDHGYTPLT-------------WKQRVTIALDVARGVEYLHSLAQQSFIH 710
G L L D T + ++ + VA+G+ +L A ++ IH
Sbjct: 112 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIH 168
Query: 711 RDLKPSNILIGDDMRAKVADFGLVKNAP-DGKYSVETRLAGTFGYLAPE 758
RDL NIL+ K+ DFGL ++ D Y V+ ++APE
Sbjct: 169 RDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPE 217
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 55/136 (40%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+ G + HL E H Y
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY---- 147
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 148 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 197
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 198 X----LCGTPEYLAPE 209
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 55/136 (40%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+ G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 197 X----LCGTPEYLAPE 208
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 608 IAVKRMESNTMGNKGLSEFQA---EIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPR 663
+AVK ++ + L+E +A E+ VL+ + H ++V LLG C G L++ EY
Sbjct: 72 VAVKMLKPSA----HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCY 127
Query: 664 GTLAQHLFEWHDHGYTPLT-------------WKQRVTIALDVARGVEYLHSLAQQSFIH 710
G L L D T + ++ + VA+G+ +L A ++ IH
Sbjct: 128 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIH 184
Query: 711 RDLKPSNILIGDDMRAKVADFGLVKNAP-DGKYSVETRLAGTFGYLAPE 758
RDL NIL+ K+ DFGL ++ D Y V+ ++APE
Sbjct: 185 RDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPE 233
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 27/161 (16%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K++ E+ ++ V H+++++LL + P+ TL
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLE 92
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVAR----------GVEYLHSLAQQSFIHRDLKPSN 717
+ + Q + + LD R G+++LHS IHRDLKPSN
Sbjct: 93 EFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSN 149
Query: 718 ILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
I++ D K+ DFGL + A G + T T Y APE
Sbjct: 150 IVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 188
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 55/136 (40%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+ G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 197 X----LCGTPEYLAPE 208
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 19/119 (15%)
Query: 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSL------AQQ 706
E LLV EY P G+L ++L W +A V RG+ YLH+ +
Sbjct: 86 EYLLVMEYYPNGSLXKYL------SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKP 139
Query: 707 SFIHRDLKPSNILIGDDMRAKVADFGLVKN-------APDGKYSVETRLAGTFGYLAPE 758
+ HRDL N+L+ +D ++DFGL P + + GT Y+APE
Sbjct: 140 AISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPE 198
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 602 LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYM 661
L K KR + E + E+++L +V H +++ L N ++ +L+ E +
Sbjct: 38 LEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELV 97
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L L + L+ ++ + + GV YLH+ + H DLKP NI++
Sbjct: 98 SGGELFDFLAQKE-----SLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLL 149
Query: 722 DDM----RAKVADFGLVKNAPDGKYSVETR-LAGTFGYLAPE 758
D K+ DFGL DG VE + + GT ++APE
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPE 188
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 27/161 (16%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K++ E+ ++ V H+++++LL + P+ TL
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLE 93
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVAR----------GVEYLHSLAQQSFIHRDLKPSN 717
+ + Q + + LD R G+++LHS IHRDLKPSN
Sbjct: 94 EFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSN 150
Query: 718 ILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
I++ D K+ DFGL + A G + T T Y APE
Sbjct: 151 IVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 189
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 69/153 (45%), Gaps = 16/153 (10%)
Query: 608 IAVKRME-SNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
+A+K+M S N+ + E+ L K+RH + + G + LV EY G+
Sbjct: 43 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGS- 100
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
A L E H PL + + +G+ YLHS + IHRD+K NIL+ +
Sbjct: 101 ASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLV 154
Query: 727 KVADFGLVK-NAPDGKYSVETRLAGTFGYLAPE 758
K+ DFG AP + GT ++APE
Sbjct: 155 KLGDFGSASIMAPANXF------VGTPYWMAPE 181
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 55/136 (40%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+ G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 197 X----LCGTPEYLAPE 208
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 15/165 (9%)
Query: 603 PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
P G +A+K++E L + EI +L +H +++ + +R +E
Sbjct: 34 PTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENIITIFNI-----QRPDSFENFN 87
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
+ Q L + H I + + + + L + IHRDLKPSN+LI
Sbjct: 88 EVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINS 147
Query: 723 DMRAKVADFGLVK---------NAPDGKYSVETRLAGTFGYLAPE 758
+ KV DFGL + + P G+ S T T Y APE
Sbjct: 148 NCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 55/136 (40%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+ G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 197 X----LCGTPEYLAPE 208
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 27/161 (16%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K++ E+ ++ V H+++++LL + P+ TL
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLE 93
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVAR----------GVEYLHSLAQQSFIHRDLKPSN 717
+ + Q + + LD R G+++LHS IHRDLKPSN
Sbjct: 94 EFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSN 150
Query: 718 ILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
I++ D K+ DFGL + A G + T T Y APE
Sbjct: 151 IVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 189
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 15/165 (9%)
Query: 603 PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
P G +A+K++E L + EI +L +H +++ + +R +E
Sbjct: 34 PTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENIITIFNI-----QRPDSFENFN 87
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
+ Q L + H I + + + + L + IHRDLKPSN+LI
Sbjct: 88 EVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINS 147
Query: 723 DMRAKVADFGLVK---------NAPDGKYSVETRLAGTFGYLAPE 758
+ KV DFGL + + P G+ S T T Y APE
Sbjct: 148 NCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 55/136 (40%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHL------FEWHDHGYTPLT 682
E +L V LV L + S +V EY+ G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 197 X----LCGTPEYLAPE 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 626 FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQ 685
+ EI + + H ++V G+ G+ + L EY G L + D G P Q
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIG-MPEPDAQ 108
Query: 686 RVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVE 745
R L GV YLH + HRD+KP N+L+ + K++DFGL A +Y+
Sbjct: 109 RFFHQL--MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGL---ATVFRYNNR 160
Query: 746 TRL----AGTFGYLAPE 758
RL GT Y+APE
Sbjct: 161 ERLLNKMCGTLPYVAPE 177
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 626 FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQ 685
+ EI + + H ++V G+ G+ + L EY G L + D G P Q
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIG-MPEPDAQ 108
Query: 686 RVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVE 745
R L GV YLH + HRD+KP N+L+ + K++DFGL A +Y+
Sbjct: 109 RFFHQL--MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGL---ATVFRYNNR 160
Query: 746 TRL----AGTFGYLAPE 758
RL GT Y+APE
Sbjct: 161 ERLLNKMCGTLPYVAPE 177
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 626 FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQ 685
+ EI + + H ++V G+ G+ + L EY G L + D G P Q
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIG-MPEPDAQ 108
Query: 686 RVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVE 745
R L GV YLH + HRD+KP N+L+ + K++DFGL A +Y+
Sbjct: 109 RFFHQL--MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGL---ATVFRYNNR 160
Query: 746 TRL----AGTFGYLAPE 758
RL GT Y+APE
Sbjct: 161 ERLLNKMCGTLPYVAPE 177
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 627 QAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQR 686
+ EI +L K+ H ++ + + + + +V E M G L + G L
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV-----GNKRLKEATC 116
Query: 687 VTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG---DDMRAKVADFGLVKNAPDGKYS 743
+ V+YLH + IHRDLKP N+L+ +D K+ DFG K G+ S
Sbjct: 117 KLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETS 171
Query: 744 VETRLAGTFGYLAPEY------AGKHWMILCQMTGLI 774
+ L GT YLAPE AG + + C G+I
Sbjct: 172 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 208
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ DF L ++ D T T
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEM----TGYVATR 186
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 187 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 212
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 22/166 (13%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K ++ G EF+ E + +++H ++V LLG +++ Y G L
Sbjct: 59 VAIKTLKDKAEGPLR-EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLH 117
Query: 668 QHLFEWHDHGYTPLTWKQR-----------VTIALDVARGVEYLHSLAQQSFIHRDLKPS 716
+ L H T R V + +A G+EYL S +H+DL
Sbjct: 118 EFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATR 174
Query: 717 NILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGT----FGYLAPE 758
N+L+ D + K++D GL + Y +L G ++APE
Sbjct: 175 NVLVYDKLNVKISDLGLFREVYAADY---YKLLGNSLLPIRWMAPE 217
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ FGL ++ D T T
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEM----TGYVATR 186
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 187 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 212
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 55/136 (40%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+ G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 197 X----LCGTPEYLAPE 208
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 22/158 (13%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGSERLLVYEYMPR 663
KI KRME+NT Q EI L H ++V L + LV E +
Sbjct: 40 AVKIISKRMEANT---------QKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90
Query: 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
G L + + + T ++ R ++ V ++H + +HRDLKP N+L D+
Sbjct: 91 GELFERIKKKKHFSETEASYIMRKLVS-----AVSHMHDVG---VVHRDLKPENLLFTDE 142
Query: 724 ---MRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
+ K+ DFG + P ++T T Y APE
Sbjct: 143 NDNLEIKIIDFGFARLKPPDNQPLKTP-CFTLHYAAPE 179
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 627 QAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQR 686
+ EI +L K+ H ++ + + + + +V E M G L + G L
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV-----GNKRLKEATC 116
Query: 687 VTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG---DDMRAKVADFGLVKNAPDGKYS 743
+ V+YLH + IHRDLKP N+L+ +D K+ DFG K G+ S
Sbjct: 117 KLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETS 171
Query: 744 VETRLAGTFGYLAPEY------AGKHWMILCQMTGLI 774
+ L GT YLAPE AG + + C G+I
Sbjct: 172 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 208
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 626 FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQ 685
+ EI + + H ++V G+ G+ + L EY G L + D G P Q
Sbjct: 52 IKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIG-MPEPDAQ 108
Query: 686 RVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVE 745
R L GV YLH + HRD+KP N+L+ + K++DFGL A +Y+
Sbjct: 109 RFFHQL--MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGL---ATVFRYNNR 160
Query: 746 TRL----AGTFGYLAPE 758
RL GT Y+APE
Sbjct: 161 ERLLNKMCGTLPYVAPE 177
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 627 QAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQR 686
+ EI +L K+ H ++ + + + + +V E M G L + G L
Sbjct: 62 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV-----GNKRLKEATC 115
Query: 687 VTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG---DDMRAKVADFGLVKNAPDGKYS 743
+ V+YLH + IHRDLKP N+L+ +D K+ DFG K G+ S
Sbjct: 116 KLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETS 170
Query: 744 VETRLAGTFGYLAPEY------AGKHWMILCQMTGLI 774
+ L GT YLAPE AG + + C G+I
Sbjct: 171 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 207
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+ ++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 28 GEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 83
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 84 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 139
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y+ E T Y APE
Sbjct: 140 GAIKLADFGLARAFGVPVRTYTHEV---VTLWYRAPE 173
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+ ++ +T S EI++L ++ H ++V LL ++ LV+E+
Sbjct: 27 GEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF---- 82
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
L Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 83 -LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 138
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y+ E T Y APE
Sbjct: 139 GAIKLADFGLARAFGVPVRTYTHEV---VTLWYRAPE 172
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 17/163 (10%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G + A K + + + + + + E + K++H ++V L S LV++ + G
Sbjct: 31 GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 90
Query: 665 TLAQHLF--EWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
L + + E++ +Q + + Y HS +HR+LKP N+L+
Sbjct: 91 ELFEDIVAREFYSEADASHCIQQ-------ILESIAYCHS---NGIVHRNLKPENLLLAS 140
Query: 723 DMR---AKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGK 762
+ K+ADFGL D + AGT GYL+PE K
Sbjct: 141 KAKGAAVKLADFGLAIEVNDSE--AWHGFAGTPGYLSPEVLKK 181
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 55/136 (40%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+ G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 197 X----LXGTPEYLAPE 208
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRL 748
IA+ + + +E+LHS + S IHRD+KPSN+LI + K+ DFG+ D +T
Sbjct: 158 IAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS--VAKTID 213
Query: 749 AGTFGYLAPE 758
AG Y+APE
Sbjct: 214 AGCKPYMAPE 223
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 17/163 (10%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G + A K + + + + + + E + K++H ++V L S LV++ + G
Sbjct: 31 GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 90
Query: 665 TLAQHLF--EWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
L + + E++ +Q + + Y HS +HR+LKP N+L+
Sbjct: 91 ELFEDIVAREFYSEADASHCIQQ-------ILESIAYCHS---NGIVHRNLKPENLLLAS 140
Query: 723 DMR---AKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGK 762
+ K+ADFGL D + AGT GYL+PE K
Sbjct: 141 KAKGAAVKLADFGLAIEVNDSE--AWHGFAGTPGYLSPEVLKK 181
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 68/158 (43%), Gaps = 23/158 (14%)
Query: 609 AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQ 668
AVK + + NK S E+ +L K+ H +++ L + S +V E G L
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFD 110
Query: 669 HL-----FEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI--- 720
+ F HD I V G+ Y+H + + +HRDLKP NIL+
Sbjct: 111 EIIKRKRFSEHDAA----------RIIKQVFSGITYMH---KHNIVHRDLKPENILLESK 157
Query: 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
D K+ DFGL ++ R+ GT Y+APE
Sbjct: 158 EKDCDIKIIDFGL-STCFQQNTKMKDRI-GTAYYIAPE 193
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 627 QAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQR 686
+ EI +L K+ H ++ + + + + +V E M G L + G L
Sbjct: 69 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV-----GNKRLKEATC 122
Query: 687 VTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG---DDMRAKVADFGLVKNAPDGKYS 743
+ V+YLH + IHRDLKP N+L+ +D K+ DFG K G+ S
Sbjct: 123 KLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETS 177
Query: 744 VETRLAGTFGYLAPEY------AGKHWMILCQMTGLI 774
+ L GT YLAPE AG + + C G+I
Sbjct: 178 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 214
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 627 QAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQR 686
+ EI +L K+ H ++ + + + + +V E M G L + G L
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV-----GNKRLKEATC 116
Query: 687 VTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG---DDMRAKVADFGLVKNAPDGKYS 743
+ V+YLH + IHRDLKP N+L+ +D K+ DFG K G+ S
Sbjct: 117 KLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETS 171
Query: 744 VETRLAGTFGYLAPEY------AGKHWMILCQMTGLI 774
+ L GT YLAPE AG + + C G+I
Sbjct: 172 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 208
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 17/163 (10%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G + A K + + + + + + E + K++H ++V L S LV++ + G
Sbjct: 30 GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 89
Query: 665 TLAQHLF--EWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
L + + E++ +Q + + Y HS +HR+LKP N+L+
Sbjct: 90 ELFEDIVAREFYSEADASHCIQQ-------ILESIAYCHS---NGIVHRNLKPENLLLAS 139
Query: 723 DMR---AKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGK 762
+ K+ADFGL D + AGT GYL+PE K
Sbjct: 140 KAKGAAVKLADFGLAIEVNDSE--AWHGFAGTPGYLSPEVLKK 180
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 626 FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQ 685
+ EI + + H ++V G+ G+ + L EY G L + D G P Q
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIG-MPEPDAQ 107
Query: 686 RVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVE 745
R L GV YLH + HRD+KP N+L+ + K++DFGL A +Y+
Sbjct: 108 RFFHQL--MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGL---ATVFRYNNR 159
Query: 746 TRL----AGTFGYLAPE 758
RL GT Y+APE
Sbjct: 160 ERLLNKMCGTLPYVAPE 176
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 68/158 (43%), Gaps = 23/158 (14%)
Query: 609 AVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQ 668
AVK + + NK S E+ +L K+ H +++ L + S +V E G L
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFD 110
Query: 669 HL-----FEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI--- 720
+ F HD I V G+ Y+H + + +HRDLKP NIL+
Sbjct: 111 EIIKRKRFSEHDAA----------RIIKQVFSGITYMH---KHNIVHRDLKPENILLESK 157
Query: 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
D K+ DFGL ++ R+ GT Y+APE
Sbjct: 158 EKDCDIKIIDFGL-STCFQQNTKMKDRI-GTAYYIAPE 193
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 18/114 (15%)
Query: 629 EIAVLTKVRHRHLVALLGYCI-----NGSERLLVYEYMPRGTLAQHLFEWHDHGYTP--L 681
EIA+L ++ H H+V +L I E +V E + + LF TP L
Sbjct: 102 EIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIA--DSDFKKLFR------TPVYL 153
Query: 682 TWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735
T T+ ++ GV+Y+HS +HRDLKP+N L+ D KV DFGL +
Sbjct: 154 TELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 626 FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQ 685
+ EI + + H ++V G+ G+ + L EY G L + D G P Q
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIG-MPEPDAQ 108
Query: 686 RVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVE 745
R L GV YLH + HRD+KP N+L+ + K++DFGL A +Y+
Sbjct: 109 RFFHQL--MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGL---ATVFRYNNR 160
Query: 746 TRL----AGTFGYLAPE 758
RL GT Y+APE
Sbjct: 161 ERLLNKMCGTLPYVAPE 177
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 626 FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQ 685
+ EI + + H ++V G+ G+ + L EY G L + D G P Q
Sbjct: 50 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIG-MPEPDAQ 106
Query: 686 RVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVE 745
R L GV YLH + HRD+KP N+L+ + K++DFGL A +Y+
Sbjct: 107 RFFHQL--MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGL---ATVFRYNNR 158
Query: 746 TRL----AGTFGYLAPE 758
RL GT Y+APE
Sbjct: 159 ERLLNKMCGTLPYVAPE 175
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 626 FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQ 685
+ EI + + H ++V G+ G+ + L EY G L + D G P Q
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIG-MPEPDAQ 107
Query: 686 RVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVE 745
R L GV YLH + HRD+KP N+L+ + K++DFGL A +Y+
Sbjct: 108 RFFHQL--MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGL---ATVFRYNNR 159
Query: 746 TRL----AGTFGYLAPE 758
RL GT Y+APE
Sbjct: 160 ERLLNKMCGTLPYVAPE 176
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 626 FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQ 685
+ EI + + H ++V G+ G+ + L EY G L + D G P Q
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIG-MPEPDAQ 108
Query: 686 RVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVE 745
R L GV YLH + HRD+KP N+L+ + K++DFGL A +Y+
Sbjct: 109 RFFHQL--MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGL---ATVFRYNNR 160
Query: 746 TRL----AGTFGYLAPE 758
RL GT Y+APE
Sbjct: 161 ERLLNKMCGTLPYVAPE 177
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 626 FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQ 685
+ EI + + H ++V G+ G+ + L EY G L + D G P Q
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIG-MPEPDAQ 107
Query: 686 RVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVE 745
R L GV YLH + HRD+KP N+L+ + K++DFGL A +Y+
Sbjct: 108 RFFHQL--MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGL---ATVFRYNNR 159
Query: 746 TRL----AGTFGYLAPE 758
RL GT Y+APE
Sbjct: 160 ERLLNKMCGTLPYVAPE 176
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 626 FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQ 685
+ EI + + H ++V G+ G+ + L EY G L + D G P Q
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIG-MPEPDAQ 107
Query: 686 RVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVE 745
R L GV YLH + HRD+KP N+L+ + K++DFGL A +Y+
Sbjct: 108 RFFHQL--MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGL---ATVFRYNNR 159
Query: 746 TRL----AGTFGYLAPE 758
RL GT Y+APE
Sbjct: 160 ERLLNKMCGTLPYVAPE 176
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 626 FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQ 685
+ EI + + H ++V G+ G+ + L EY G L + D G P Q
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIG-MPEPDAQ 107
Query: 686 RVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVE 745
R L GV YLH + HRD+KP N+L+ + K++DFGL A +Y+
Sbjct: 108 RFFHQL--MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGL---ATVFRYNNR 159
Query: 746 TRL----AGTFGYLAPE 758
RL GT Y+APE
Sbjct: 160 ERLLNKMCGTLPYVAPE 176
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 626 FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQ 685
+ EI + + H ++V G+ G+ + L EY G L + D G P Q
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIG-MPEPDAQ 107
Query: 686 RVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVE 745
R L GV YLH + HRD+KP N+L+ + K++DFGL A +Y+
Sbjct: 108 RFFHQL--MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGL---ATVFRYNNR 159
Query: 746 TRL----AGTFGYLAPE 758
RL GT Y+APE
Sbjct: 160 ERLLNKMCGTLPYVAPE 176
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 62/148 (41%), Gaps = 9/148 (6%)
Query: 611 KRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHL 670
K +E + + L + EIA+L++V H +++ +L N LV E G
Sbjct: 61 KVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAF 120
Query: 671 FEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVAD 730
+ H PL I + V YL + IHRD+K NI+I +D K+ D
Sbjct: 121 IDRHPRLDEPLA----SYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLID 173
Query: 731 FGLVKNAPDGKYSVETRLAGTFGYLAPE 758
FG GK + GT Y APE
Sbjct: 174 FGSAAYLERGK--LFYTFCGTIEYCAPE 199
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 55/136 (40%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+ G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 197 X----LCGTPEYLAPE 208
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 15/146 (10%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K ++ G EF+ E + +++H ++V LLG +++ Y G L
Sbjct: 42 VAIKTLKDKAEGPLR-EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLH 100
Query: 668 QHLFEWHDHGYTPLTWKQR-----------VTIALDVARGVEYLHSLAQQSFIHRDLKPS 716
+ L H T R V + +A G+EYL S +H+DL
Sbjct: 101 EFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATR 157
Query: 717 NILIGDDMRAKVADFGLVKNAPDGKY 742
N+L+ D + K++D GL + Y
Sbjct: 158 NVLVYDKLNVKISDLGLFREVYAADY 183
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 608 IAVKRMESNTMGNKGLSEFQA---EIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPR 663
+AVK ++ + L+E +A E+ VL+ + H ++V LLG C G L++ EY
Sbjct: 74 VAVKMLKPSA----HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCY 129
Query: 664 GTLAQHLFEWHDHGYTPLT-------------WKQRVTIALDVARGVEYLHSLAQQSFIH 710
G L L D T + ++ + VA+G+ +L A ++ IH
Sbjct: 130 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIH 186
Query: 711 RDLKPSNILIGDDMRAKVADFGLVKNAP-DGKYSVETRLAGTFGYLAPE 758
RDL NIL+ K+ DFGL ++ D Y V+ ++APE
Sbjct: 187 RDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPE 235
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 81 TLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQD-IYLD-NNNFTSVP-TGCFDGLT 137
T+S L QLE L FQ +N+ + + SL++ IYLD ++ T V G F+GL+
Sbjct: 92 TMSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS 150
Query: 138 NLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYN 197
+L+VL ++ N + P+ T+ +LT L + + L P F+S S+LQ L +S+N
Sbjct: 151 SLEVLKMAGNSFQENF-LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 209
Query: 198 NF 199
NF
Sbjct: 210 NF 211
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 99 MNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDN 147
+ ++ IPS +AT L+ L++N S+P G FD LT L LSLS N
Sbjct: 19 LTSVPTGIPS--SATRLE---LESNKLQSLPHGVFDKLTQLTKLSLSSN 62
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ D GL ++ D T T
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEM----TGYVATR 186
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 187 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 212
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 64/140 (45%), Gaps = 28/140 (20%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRV 687
E VL RH L AL Y +RL V EY G L HL ++RV
Sbjct: 58 ENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHL------------SRERV 104
Query: 688 TIALDVAR--------GVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA-P 738
+ D AR ++YLHS +++ ++RDLK N+++ D K+ DFGL K
Sbjct: 105 -FSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 161
Query: 739 DGKYSVETRLAGTFGYLAPE 758
DG + GT YLAPE
Sbjct: 162 DG--ATMKXFCGTPEYLAPE 179
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 29/161 (18%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
E+AVL ++ H +++ L + + LV E G L + + +Q+ +
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL-----------FDEIILRQKFS 102
Query: 689 ------IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR---AKVADFGLVKNAPD 739
I V G YLH + + +HRDLKP N+L+ R K+ DFGL +
Sbjct: 103 EVDAAVIMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV 159
Query: 740 GKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780
G ++ RL GT Y+APE K + C +W G +
Sbjct: 160 GG-KMKERL-GTAYYIAPEVLRKKYDEKCD----VWSCGVI 194
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 608 IAVKRMESNTMGNKGLSEFQA---EIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPR 663
+AVK ++ + L+E +A E+ VL+ + H ++V LLG C G L++ EY
Sbjct: 79 VAVKMLKPSA----HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCY 134
Query: 664 GTLAQHLFEWHDHGYTPLT-------------WKQRVTIALDVARGVEYLHSLAQQSFIH 710
G L L D T + ++ + VA+G+ +L A ++ IH
Sbjct: 135 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIH 191
Query: 711 RDLKPSNILIGDDMRAKVADFGLVKNAP-DGKYSVETRLAGTFGYLAPE 758
RDL NIL+ K+ DFGL ++ D Y V+ ++APE
Sbjct: 192 RDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPE 240
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 64/140 (45%), Gaps = 28/140 (20%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRV 687
E VL RH L AL Y +RL V EY G L HL ++RV
Sbjct: 59 ENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHL------------SRERV 105
Query: 688 TIALDVAR--------GVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA-P 738
+ D AR ++YLHS +++ ++RDLK N+++ D K+ DFGL K
Sbjct: 106 -FSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 162
Query: 739 DGKYSVETRLAGTFGYLAPE 758
DG + GT YLAPE
Sbjct: 163 DG--ATMKXFCGTPEYLAPE 180
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 64/140 (45%), Gaps = 28/140 (20%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRV 687
E VL RH L AL Y +RL V EY G L HL ++RV
Sbjct: 60 ENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHL------------SRERV 106
Query: 688 TIALDVAR--------GVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA-P 738
+ D AR ++YLHS +++ ++RDLK N+++ D K+ DFGL K
Sbjct: 107 -FSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 163
Query: 739 DGKYSVETRLAGTFGYLAPE 758
DG + GT YLAPE
Sbjct: 164 DG--ATMKXFCGTPEYLAPE 181
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E++
Sbjct: 31 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHV--- 87
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
Q L ++ D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 88 --DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 142
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y E T Y APE
Sbjct: 143 GAIKLADFGLARAFGVPVRTYXHEV---VTLWYRAPE 176
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 81 TLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQD-IYLD-NNNFTSVP-TGCFDGLT 137
T+S L QLE L FQ +N+ + + SL++ IYLD ++ T V G F+GL+
Sbjct: 387 TMSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS 445
Query: 138 NLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYN 197
+L+VL ++ N + P+ T+ +LT L + + L P F+S S+LQ L +S+N
Sbjct: 446 SLEVLKMAGNSFQENF-LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 504
Query: 198 NF 199
NF
Sbjct: 505 NF 506
Score = 29.3 bits (64), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 104 GAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWP-FPNELTKS 162
GA SL++ ++L L N S+ G F GL++LQ L ++ NLA FP K+
Sbjct: 70 GAYQSLSHLSTL---ILTGNPIQSLALGAFSGLSSLQKL-VAVETNLASLENFPIGHLKT 125
Query: 163 TSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYN 197
+ + F L P++F + +NL++L LS N
Sbjct: 126 LKELNVAHNLIQSFKL-PEYFSNLTNLEHLDLSSN 159
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ D GL ++ D T T
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEM----TGYVATR 186
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 187 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 212
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 626 FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQ 685
+ EI + + H ++V G+ G+ + L EY G L + D G P Q
Sbjct: 51 IKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIG-MPEPDAQ 107
Query: 686 RVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVE 745
R L GV YLH + HRD+KP N+L+ + K++DFGL A +Y+
Sbjct: 108 RFFHQL--MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGL---ATVFRYNNR 159
Query: 746 TRL----AGTFGYLAPE 758
RL GT Y+APE
Sbjct: 160 ERLLNKMCGTLPYVAPE 176
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 626 FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQ 685
+ EI + + H ++V G+ G+ + L EY G L + D G P Q
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIG-MPEPDAQ 107
Query: 686 RVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVE 745
R L GV YLH + HRD+KP N+L+ + K++DFGL A +Y+
Sbjct: 108 RFFHQL--MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGL---ATVFRYNNR 159
Query: 746 TRL----AGTFGYLAPE 758
RL GT Y+APE
Sbjct: 160 ERLLNKMXGTLPYVAPE 176
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G +A+K++ +T S EI++L ++ H ++V LL ++ LV+E++
Sbjct: 27 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHV--- 83
Query: 665 TLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
Q L + D T + + + +G+ + HS +HRDLKP N+LI +
Sbjct: 84 --HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 138
Query: 724 MRAKVADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
K+ADFGL + P Y+ E T Y APE
Sbjct: 139 GAIKLADFGLARAFGVPVRTYTHE---VVTLWYRAPE 172
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 55/136 (40%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+ G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N++I +V DFG K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAPE 758
L GT YLAPE
Sbjct: 197 X----LCGTPEYLAPE 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 626 FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQ 685
+ EI + + H ++V G+ G+ + L EY G L + D G P Q
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIG-MPEPDAQ 107
Query: 686 RVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVE 745
R L GV YLH + HRD+KP N+L+ + K++DFGL A +Y+
Sbjct: 108 RFFHQL--MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGL---ATVFRYNNR 159
Query: 746 TRL----AGTFGYLAPE 758
RL GT Y+APE
Sbjct: 160 ERLLNKMXGTLPYVAPE 176
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 10/141 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+KR+ + S EI +L +++H+++V L + + LV+E+
Sbjct: 30 VALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC-----D 84
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
Q L ++ D L + + + +G+ + HS ++ +HRDLKP N+LI + K
Sbjct: 85 QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELK 141
Query: 728 VADFGLVK--NAPDGKYSVET 746
+A+FGL + P YS E
Sbjct: 142 LANFGLARAFGIPVRCYSAEV 162
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 626 FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQ 685
+ EI + + H ++V G+ G+ + L EY G L + D G P Q
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIG-MPEPDAQ 107
Query: 686 RVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVE 745
R L GV YLH + HRD+KP N+L+ + K++DFGL A +Y+
Sbjct: 108 RFFHQL--MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGL---ATVFRYNNR 159
Query: 746 TRL----AGTFGYLAPE 758
RL GT Y+APE
Sbjct: 160 ERLLNKMXGTLPYVAPE 176
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 608 IAVKRMESNTMGNKGLSEFQA---EIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPR 663
+AVK ++ + L+E +A E+ VL+ + H ++V LLG C G L++ EY
Sbjct: 79 VAVKMLKPSA----HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCY 134
Query: 664 GTLAQHLFEWHDHGYTPLT-------------WKQRVTIALDVARGVEYLHSLAQQSFIH 710
G L L D T + ++ + VA+G+ +L A ++ IH
Sbjct: 135 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIH 191
Query: 711 RDLKPSNILIGDDMRAKVADFGLVKNAP-DGKYSVETRLAGTFGYLAPE 758
RDL NIL+ K+ DFGL ++ D Y V+ ++APE
Sbjct: 192 RDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPE 240
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 13/165 (7%)
Query: 601 ELPDGTKIAVKRM-ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLG-YCINGSERLLVY 658
+L + +IA+K + E ++ ++ L E EIA+ ++H+++V LG + NG ++ +
Sbjct: 43 DLSNQVRIAIKEIPERDSRYSQPLHE---EIALHKHLKHKNIVQYLGSFSENGFIKIFM- 98
Query: 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
E +P G+L+ L + PL ++ TI + +E L L +HRD+K N+
Sbjct: 99 EQVPGGSLSALL----RSKWGPLKDNEQ-TIGFYTKQILEGLKYLHDNQIVHRDIKGDNV 153
Query: 719 LIGDDMRA-KVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGK 762
LI K++DFG K ET GT Y+APE K
Sbjct: 154 LINTYSGVLKISDFGTSKRLAGINPCTET-FTGTLQYMAPEIIDK 197
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 696 GVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYL 755
G+++LHS IHRDLKPSNI++ D K+ DFGL + A G + T T Y
Sbjct: 132 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYR 186
Query: 756 APE 758
APE
Sbjct: 187 APE 189
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 696 GVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYL 755
G+++LHS IHRDLKPSNI++ D K+ DFGL + A G + T T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYR 192
Query: 756 APE 758
APE
Sbjct: 193 APE 195
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 696 GVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYL 755
G+++LHS IHRDLKPSNI++ D K+ DFGL + A G + T T Y
Sbjct: 143 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYR 197
Query: 756 APE 758
APE
Sbjct: 198 APE 200
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 696 GVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYL 755
G+++LHS IHRDLKPSNI++ D K+ DFGL + A G + T T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYR 192
Query: 756 APE 758
APE
Sbjct: 193 APE 195
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 13/165 (7%)
Query: 601 ELPDGTKIAVKRM-ESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLG-YCINGSERLLVY 658
+L + +IA+K + E ++ ++ L E EIA+ ++H+++V LG + NG ++ +
Sbjct: 29 DLSNQVRIAIKEIPERDSRYSQPLHE---EIALHKHLKHKNIVQYLGSFSENGFIKIFM- 84
Query: 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
E +P G+L+ L + PL ++ TI + +E L L +HRD+K N+
Sbjct: 85 EQVPGGSLSALL----RSKWGPLKDNEQ-TIGFYTKQILEGLKYLHDNQIVHRDIKGDNV 139
Query: 719 LIGDDMRA-KVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGK 762
LI K++DFG K ET GT Y+APE K
Sbjct: 140 LINTYSGVLKISDFGTSKRLAGINPCTET-FTGTLQYMAPEIIDK 183
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 696 GVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYL 755
G+++LHS IHRDLKPSNI++ D K+ DFGL + A G + T T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYR 192
Query: 756 APE 758
APE
Sbjct: 193 APE 195
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 626 FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQ 685
+ EI + + H ++V G+ G+ + L EY G L + D G P Q
Sbjct: 52 IKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIG-MPEPDAQ 108
Query: 686 RVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVE 745
R L GV YLH + HRD+KP N+L+ + K++DFGL A +Y+
Sbjct: 109 RFFHQL--MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGL---ATVFRYNNR 160
Query: 746 TRL----AGTFGYLAPE 758
RL GT Y+APE
Sbjct: 161 ERLLNKMXGTLPYVAPE 177
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 12/161 (7%)
Query: 602 LPDGTKIAVKRME-SNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660
L DG +A+K+++ + M K ++ EI +L ++ H +++ I +E +V E
Sbjct: 54 LLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLEL 113
Query: 661 MPRGTLAQHLFEWHDHGY---TPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSN 717
G L++ + + WK V + +E++HS + +HRD+KP+N
Sbjct: 114 ADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLC----SALEHMHS---RRVMHRDIKPAN 166
Query: 718 ILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
+ I K+ D GL + K + L GT Y++PE
Sbjct: 167 VFITATGVVKLGDLGLGRFF-SSKTTAAHSLVGTPYYMSPE 206
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 696 GVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYL 755
G+++LHS IHRDLKPSNI++ D K+ DFGL + A G + T T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYR 192
Query: 756 APE 758
APE
Sbjct: 193 APE 195
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 696 GVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYL 755
G+++LHS IHRDLKPSNI++ D K+ DFGL + A G + T T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYR 192
Query: 756 APE 758
APE
Sbjct: 193 APE 195
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 696 GVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYL 755
G+++LHS IHRDLKPSNI++ D K+ DFGL + A G + T T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYR 192
Query: 756 APE 758
APE
Sbjct: 193 APE 195
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 696 GVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYL 755
G+++LHS IHRDLKPSNI++ D K+ DFGL + A G + T T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYR 193
Query: 756 APE 758
APE
Sbjct: 194 APE 196
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 696 GVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYL 755
G+++LHS IHRDLKPSNI++ D K+ DFGL + A G + T T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYR 192
Query: 756 APE 758
APE
Sbjct: 193 APE 195
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 696 GVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYL 755
G+++LHS IHRDLKPSNI++ D K+ DFGL + A G + T T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYR 192
Query: 756 APE 758
APE
Sbjct: 193 APE 195
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 626 FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQ 685
+ EI + + H ++V G+ G+ + L EY G L + D G P Q
Sbjct: 51 IKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIG-MPEPDAQ 107
Query: 686 RVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVE 745
R L GV YLH + HRD+KP N+L+ + K++DFGL A +Y+
Sbjct: 108 RFFHQL--MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGL---ATVFRYNNR 159
Query: 746 TRL----AGTFGYLAPE 758
RL GT Y+APE
Sbjct: 160 ERLLNKMXGTLPYVAPE 176
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 628 AEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQR 686
E VL + + L C +RL V EY+ G L H+ Q
Sbjct: 68 VEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHI-----QQVGKFKEPQA 122
Query: 687 VTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK-NAPDGKYSVE 745
V A +++ G+ +LH ++ I+RDLK N+++ + K+ADFG+ K + DG V
Sbjct: 123 VFYAAEISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG---VT 176
Query: 746 TR-LAGTFGYLAPE 758
TR GT Y+APE
Sbjct: 177 TREFCGTPDYIAPE 190
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 15/165 (9%)
Query: 603 PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
P G +A+K++E L + EI +L +H +++ + +R +E
Sbjct: 34 PTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENIITIFNI-----QRPDSFENFN 87
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
+ Q L + H I + + + + L + IHRDLKPSN+LI
Sbjct: 88 EVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINS 147
Query: 723 DMRAKVADFGLVK---------NAPDGKYSVETRLAGTFGYLAPE 758
+ KV DFGL + + P G+ S T Y APE
Sbjct: 148 NCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTF 752
+ RG++Y+HS IHRDLKPSN+ + +D K+ D GL ++ D T T
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEM----TGYVATR 186
Query: 753 GYLAPEYAGKHWMILCQMTGLIWLHGSV 780
Y APE +WM Q IW G +
Sbjct: 187 WYRAPEIM-LNWMHYNQTVD-IWSVGCI 212
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 27/170 (15%)
Query: 610 VKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQH 669
+K+ T N G E+AVL ++ H +++ L + + LV E G L
Sbjct: 54 IKKSSVTTTSNSG--ALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL--- 108
Query: 670 LFEWHDHGYTPLTWKQRVT------IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
+ + +Q+ + I V G YLH + + +HRDLKP N+L+
Sbjct: 109 --------FDEIILRQKFSEVDAAVIMKQVLSGTTYLH---KHNIVHRDLKPENLLLESK 157
Query: 724 MR---AKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQM 770
R K+ DFGL + G ++ RL GT Y+APE K + C +
Sbjct: 158 SRDALIKIVDFGLSAHFEVGG-KMKERL-GTAYYIAPEVLRKKYDEKCDV 205
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 13/136 (9%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSER--LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQR 686
E VL K+ H+++V L + R +L+ E+ P G+L L E + P + +
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPES--EF 114
Query: 687 VTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL--IGDDMRA--KVADFGLVKNAPDGKY 742
+ + DV G+ +L + +HR++KP NI+ IG+D ++ K+ DFG + D +
Sbjct: 115 LIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ 171
Query: 743 SVETRLAGTFGYLAPE 758
V L GT YL P+
Sbjct: 172 FVX--LYGTEEYLHPD 185
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 696 GVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYL 755
G+++LHS IHRDLKPSNI++ D K+ DFGL + A G + T T Y
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPEVVTRYYR 192
Query: 756 APE 758
APE
Sbjct: 193 APE 195
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 18/159 (11%)
Query: 90 TQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPN 149
T++ S + ++ IPS +AT L+ L++N S+P G FD LT L LSLS N
Sbjct: 10 TEIRCNSKGLTSVPTGIPS--SATRLE---LESNKLQSLPHGVFDKLTQLTKLSLSQNQI 64
Query: 150 LAPWPFPNEL-TKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFA 208
+ P+ + K T LT LY+ + L FD + L+ L L N F
Sbjct: 65 QS---LPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFD 121
Query: 209 K-SDIQNLWMNDQQLGLSG-TLDVLSGMTQLRQVWLHKN 245
+ + +Q +W++ S +D LS WL+KN
Sbjct: 122 RLTSLQKIWLHTNPWDCSCPRIDYLSR-------WLNKN 153
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 63 DNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPS--LANATSLQDIYL 120
D ++T +SL+++ + LT+L L N + ++P+ T L+++ L
Sbjct: 49 DKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQ-SLPNGVFDKLTQLKELAL 107
Query: 121 DNNNFTSVPTGCFDGLTNLQVLSLSDNP 148
D N SVP G FD LT+LQ + L NP
Sbjct: 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNP 135
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 28/166 (16%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRH-RHLVALLGYCINGSERLLVYEYMPR 663
G + A K ++ G +E EIAVL + ++ L N SE +L+ EY
Sbjct: 54 GQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAG 113
Query: 664 GTLAQ----HLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719
G + L E ++ + + + GV YLH Q + +H DLKP NIL
Sbjct: 114 GEIFSLCLPELAEM-------VSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNIL 163
Query: 720 ------IGDDMRAKVADFGLVKNAPDGKYSVETR-LAGTFGYLAPE 758
+GD K+ DFG+ + ++ E R + GT YLAPE
Sbjct: 164 LSSIYPLGD---IKIVDFGMSRKI---GHACELREIMGTPEYLAPE 203
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 54/135 (40%), Gaps = 24/135 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+ G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAP 757
L GT YLAP
Sbjct: 197 X----LCGTPEYLAP 207
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 696 GVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYL 755
G+++LHS IHRDLKPSNI++ D K+ DFGL + A G + T Y
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMVPFVVTRYYR 194
Query: 756 APE 758
APE
Sbjct: 195 APE 197
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 13/136 (9%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSER--LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQR 686
E VL K+ H+++V L + R +L+ E+ P G+L + E + Y L +
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYT-VLEEPSNAYG-LPESEF 114
Query: 687 VTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL--IGDDMRA--KVADFGLVKNAPDGKY 742
+ + DV G+ +L + +HR++KP NI+ IG+D ++ K+ DFG + D +
Sbjct: 115 LIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ 171
Query: 743 SVETRLAGTFGYLAPE 758
V L GT YL P+
Sbjct: 172 FVS--LYGTEEYLHPD 185
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 81/182 (44%), Gaps = 23/182 (12%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY---M 661
G K+A+K++ E+ +L ++H +++ LL S Y++ M
Sbjct: 67 GEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 126
Query: 662 P-RGTLAQHLF--EWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
P T Q + E+ + L ++ + +G++Y+HS +HRDLKP N+
Sbjct: 127 PFMQTDLQKIMGMEFSEEKIQYLVYQ--------MLKGLKYIHSAG---VVHRDLKPGNL 175
Query: 719 LIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHG 778
+ +D K+ DFGL ++A D + T T Y APE WM Q T IW G
Sbjct: 176 AVNEDCELKILDFGLARHA-DAEM---TGYVVTRWYRAPEVILS-WMHYNQ-TVDIWSVG 229
Query: 779 SV 780
+
Sbjct: 230 CI 231
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 11/153 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K ++ T E E ++ ++ + ++V L+G C +LV E G L
Sbjct: 40 VAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPL- 96
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
H F P++ + V+ G++YL +++F+HRDL N+L+ + AK
Sbjct: 97 -HKFLVGKREEIPVS--NVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAK 150
Query: 728 VADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
++DFGL K A D Y+ + + APE
Sbjct: 151 ISDFGLSKALGADDSYYTARSAGKWPLKWYAPE 183
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 696 GVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYL 755
G+++LHS IHRDLKPSNI++ D K+ DFGL R AGT +
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL------------ARTAGTSFMM 182
Query: 756 APEYAGKHW 764
PE +++
Sbjct: 183 EPEVVTRYY 191
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 696 GVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYL 755
G+++LHS IHRDLKPSNI++ D K+ DFGL R AGT +
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL------------ARTAGTSFMM 182
Query: 756 APEYAGKHW 764
PE +++
Sbjct: 183 EPEVVTRYY 191
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 20/93 (21%)
Query: 645 LGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLA 704
+ YC NG+ +Y+ + L Q E+ W+ + + + Y+HS
Sbjct: 94 MEYCENGT----LYDLIHSENLNQQRDEY---------WR----LFRQILEALSYIHS-- 134
Query: 705 QQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737
Q IHRDLKP NI I + K+ DFGL KN
Sbjct: 135 -QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 113 TSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNEL-TKSTSLTTLYMD 171
TSL +YL N S+P G F+ LT+L L+LS N + PN + K T L L +
Sbjct: 52 TSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQS---LPNGVFDKLTQLKELAL- 107
Query: 172 NANIFGLIPD-FFDSFSNLQNLRLSYNNFTGSLPASFAK-SDIQNLWMND 219
N N +PD FD + L++LRL N F + + +Q +W++D
Sbjct: 108 NTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHD 157
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 89 LTQLETLSFQMNNIAGAIPS--LANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSD 146
LTQL+ L+ N + ++P T L+D+ L N SVP G FD LT+LQ + L D
Sbjct: 99 LTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHD 157
Query: 147 NP 148
NP
Sbjct: 158 NP 159
>pdb|3V44|A Chain A, Crystal Structure Of The N-Terminal Fragment Of Zebrafish
Tlr5
Length = 407
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 68 VTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFT 126
V T L+KS + L S T LE L+ N I + T L+++ LD N
Sbjct: 277 VKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLKELALDTNQLK 336
Query: 127 SVPTGCFDGLTNLQVLSLSDNP 148
SVP G FD LT+LQ + L NP
Sbjct: 337 SVPDGIFDRLTSLQKIWLHTNP 358
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 15/156 (9%)
Query: 113 TSLQDIYLDNNNFT-SVPTGCFDGL--TNLQVLSLSDNPNLA----------PWPFPNEL 159
TS+ + L N F S+ FD + T +Q L LS++ N+ P F +
Sbjct: 212 TSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKG 271
Query: 160 TKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASF-AKSDIQNLWMN 218
+++ + T + + IF L+ F F++L+ L L+ N +F + ++ L ++
Sbjct: 272 LEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLKELALD 331
Query: 219 DQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDL 254
QL S + +T L+++WLH N + P +
Sbjct: 332 TNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 366
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 124/320 (38%), Gaps = 48/320 (15%)
Query: 113 TSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKS-TSLTTLYMD 171
+SL + LD N F + TG F+GL NL+VL+L+ NL K TSL L +
Sbjct: 79 SSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQ-CNLDGAVLSGNFFKPLTSLEMLVLR 137
Query: 172 NANIFGLIP-DFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDV 230
+ NI + P FF + L L++N S + D+ N G TL
Sbjct: 138 DNNIKKIQPASFFLNMRRFHVLDLTFNKV-----KSICEEDLLNFQ------GKHFTLLR 186
Query: 231 LSGMT--QLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNIS 288
LS +T + + WL + P K S+ L L N + A+
Sbjct: 187 LSSITLQDMNEYWLGWEKCGNPF----KNTSITTLDLSGNGFKESMAKRFFD--AIAGTK 240
Query: 289 LQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAG--KPCDPQVTTLLQIAGDMGYPAIL 346
+Q+ L Y + S D +NF +A K CD + + A+L
Sbjct: 241 IQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIF---------ALL 291
Query: 347 SDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGP 406
+ + +T +Q I I+ A+ LT LK L L N L
Sbjct: 292 KSVFSHFTDLEQ---LTLAQNEINKID----------DNAFWGLTHLKELALDTNQLKS- 337
Query: 407 IPDGL-TKLASLQNLDVSNN 425
+PDG+ +L SLQ + + N
Sbjct: 338 VPDGIFDRLTSLQKIWLHTN 357
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 604 DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663
DG + +K + + M +K E + E+AVL ++H ++V +V +Y
Sbjct: 48 DGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEG 107
Query: 664 GTLAQHLFEWHDHGYTP---LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
G L + + + L W ++ +AL +++H + +HRD+K NI +
Sbjct: 108 GDLFKRINAQKGVLFQEDQILDWFVQICLAL------KHVHD---RKILHRDIKSQNIFL 158
Query: 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
D ++ DFG+ + + + GT YL+PE
Sbjct: 159 TKDGTVQLGDFGIAR-VLNSTVELARACIGTPYYLSPE 195
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 676 HGYTP-LTWKQRVTIALDVARGV-EYLHSLAQQSFIHRDLKPSNILIGDD--MRAKVADF 731
HG+ L + QR + ++ R + LH L Q HRD+KP N L + K+ DF
Sbjct: 155 HGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDF 214
Query: 732 GLVK---NAPDGKYSVETRLAGTFGYLAPE 758
GL K +G+Y T AGT ++APE
Sbjct: 215 GLSKEFYKLNNGEYYGMTTKAGTPYFVAPE 244
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRL 748
IA+ + + +E+LHS + S IHRD+KPSN+LI + K+ DFG+ D +
Sbjct: 114 IAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD--VAKDID 169
Query: 749 AGTFGYLAPE 758
AG Y+APE
Sbjct: 170 AGCKPYMAPE 179
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 8/116 (6%)
Query: 620 NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYT 679
N S F+A ++++K+ H+HLV G C+ G E +LV E++ G+L +L + +
Sbjct: 54 NYSESFFEAA-SMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKK--NKNCI 110
Query: 680 PLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735
+ WK V L A +H L + + IH ++ NIL+ + K + +K
Sbjct: 111 NILWKLEVAKQLAAA-----MHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIK 161
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 15/178 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G K+A+K++ E+ +L ++H +++ LL S Y++
Sbjct: 49 GEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY--- 105
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVT--IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
L + L + + + + +G++Y+HS +HRDLKP N+ + +
Sbjct: 106 -LVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNE 161
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780
D K+ DFGL ++A D + T T Y APE WM Q IW G +
Sbjct: 162 DCELKILDFGLARHA-DAEM---TGYVVTRWYRAPEVILS-WMHYNQTVD-IWSVGCI 213
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 16/159 (10%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
G + A K + + + + + + E + ++H ++V L L+++ + G
Sbjct: 47 GQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG 106
Query: 665 TLAQHLF--EWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
L + + E++ +Q + V + H Q +HRDLKP N+L+
Sbjct: 107 ELFEDIVAREYYSEADASHCIQQ-------ILEAVLHCH---QMGVVHRDLKPENLLLAS 156
Query: 723 DMR---AKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
++ K+ADFGL +G+ AGT GYL+PE
Sbjct: 157 KLKGAAVKLADFGLAIEV-EGEQQAWFGFAGTPGYLSPE 194
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 17/238 (7%)
Query: 62 CDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP--SLANATSLQDIY 119
C N +VTT S + GL + +S ++ F N +P S + +L ++
Sbjct: 7 CYNEPKVTT-SCPQQGLQAVPTGIPASSQRI----FLHGNRISYVPAASFQSCRNLTILW 61
Query: 120 LDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLI 179
L +N + F GLT L+ L LSDN L P L TL++D + L
Sbjct: 62 LHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVD-PTTFRGLGHLHTLHLDRCGLQELG 120
Query: 180 PDFFDSFSNLQNLRLSYNNFTGSLPASFAK-SDIQNLWMNDQQLGLSGTLDVLSGMTQLR 238
P F + LQ L L NN +F ++ +L+++ ++ S G+ L
Sbjct: 121 PGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIP-SVPEHAFRGLHSLD 179
Query: 239 QVWLHKNQFTGPIP----DLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNN 292
++ LH+N P DL + L L L N L+ + ++ L +L + L +N
Sbjct: 180 RLLLHQNHVARVHPHAFRDLGR---LMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDN 234
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 89 LTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDN 147
L L+ L N++A P + + L +YL NN + +P L +LQ L L+DN
Sbjct: 175 LHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDN 234
Query: 148 P 148
P
Sbjct: 235 P 235
Score = 30.0 bits (66), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Query: 373 NLANKLLAGNISP-----AYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNL 427
NL + L GN P A+ L SL L L QN++ P L L L + NNL
Sbjct: 153 NLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNL 212
Query: 428 S 428
S
Sbjct: 213 S 213
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 6/159 (3%)
Query: 604 DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLL--VYEYM 661
DG + K ++ +M +E+ +L +++H ++V I+ + L V EY
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 662 PRGTLAQHLFE-WHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
G LA + + + Y + RV L +A + S + +HRDLKP+N+ +
Sbjct: 90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 149
Query: 721 GDDMRAKVADFGLVKNA-PDGKYSVETRLAGTFGYLAPE 758
K+ DFGL + D ++ E GT Y++PE
Sbjct: 150 DGKQNVKLGDFGLARILNHDEDFAKE--FVGTPYYMSPE 186
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 83/177 (46%), Gaps = 29/177 (16%)
Query: 81 TLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQD-IYLD-NNNFTSVP-TGCFDGLT 137
T+S L QLE L FQ +N+ + + SL++ IYLD ++ T V G F+GL+
Sbjct: 387 TMSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS 445
Query: 138 NLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYN 197
+L+VL ++ N + P+ T+ +LT L + + L P F+S S+LQ L ++ N
Sbjct: 446 SLEVLKMAGNSFQENF-LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASN 504
Query: 198 NFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDL 254
S+P G D L T L+++WLH N + P +
Sbjct: 505 QLK-SVP--------------------DGIFDRL---TSLQKIWLHTNPWDCSCPRI 537
Score = 29.6 bits (65), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 104 GAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWP-FPNELTKS 162
GA SL++ ++L L N S+ G F GL++LQ L ++ NLA FP K+
Sbjct: 70 GAYQSLSHLSTL---ILTGNPIQSLALGAFSGLSSLQKL-VAVETNLASLENFPIGHLKT 125
Query: 163 TSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYN 197
+ + F L P++F + +NL++L LS N
Sbjct: 126 LKELNVAHNLIQSFKL-PEYFSNLTNLEHLDLSSN 159
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 4/158 (2%)
Query: 604 DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLL--VYEYM 661
DG + K ++ +M +E+ +L +++H ++V I+ + L V EY
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 662 PRGTLAQHLFE-WHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
G LA + + + Y + RV L +A + S + +HRDLKP+N+ +
Sbjct: 90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 149
Query: 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ DFGL + + S GT Y++PE
Sbjct: 150 DGKQNVKLGDFGLAR-ILNHDTSFAKTFVGTPYYMSPE 186
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
+V EYMP G L + + P W + T +V ++ +HS+ IHRD+KP
Sbjct: 152 MVMEYMPGGDLVNLMSNYD----VPEKWAKFYTA--EVVLALDAIHSMG---LIHRDVKP 202
Query: 716 SNILIGDDMRAKVADFG-LVKNAPDGKYSVETRLAGTFGYLAPE 758
N+L+ K+ADFG +K G +T + GT Y++PE
Sbjct: 203 DNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYISPE 245
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737
+ + Y+HS Q IHRDLKP NI I + K+ DFGL KN
Sbjct: 125 ILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 4/158 (2%)
Query: 604 DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLL--VYEYM 661
DG + K ++ +M +E+ +L +++H ++V I+ + L V EY
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 662 PRGTLAQHLFE-WHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
G LA + + + Y + RV L +A + S + +HRDLKP+N+ +
Sbjct: 90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 149
Query: 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ DFGL + + S GT Y++PE
Sbjct: 150 DGKQNVKLGDFGLAR-ILNHDTSFAKAFVGTPYYMSPE 186
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 54/136 (39%), Gaps = 24/136 (17%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLF------EWHDHGYTPLT 682
E +L V LV L + S +V EY+ G + HL E H Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY---- 146
Query: 683 WKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY 742
A + EYLHSL I+RDLKP N+LI +V DFG K +
Sbjct: 147 -------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
Query: 743 SVETRLAGTFGYLAPE 758
L GT LAPE
Sbjct: 197 X----LCGTPEALAPE 208
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 62/156 (39%), Gaps = 11/156 (7%)
Query: 604 DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663
DG AVKR S G K + AE+ KV L L + +
Sbjct: 81 DGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCG 140
Query: 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723
+L QH W W L +A +LHS Q +H D+KP+NI +G
Sbjct: 141 PSLQQHCEAWGASLPEAQVWGYLRDTLLALA----HLHS---QGLVHLDVKPANIFLGPR 193
Query: 724 MRAKVADFG-LVKNAPDGKYSVETRLAGTFGYLAPE 758
R K+ DFG LV+ G V+ G Y+APE
Sbjct: 194 GRCKLGDFGLLVELGTAGAGEVQE---GDPRYMAPE 226
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 629 EIAVLTKVR---HRHLVALLGYCINGS-----ERLLVYEYMPRGTLAQHLFEWHDHGYTP 680
E+A+L ++ H ++V L+ C + LV+E+ + Q L + D P
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEH-----VDQDLRTYLDKAPPP 107
Query: 681 -LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739
L + + RG+++LH+ +HRDLKP NIL+ K+ADFGL +
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLAR---- 160
Query: 740 GKYSVETRLAG---TFGYLAPE 758
YS + LA T Y APE
Sbjct: 161 -IYSYQMALAPVVVTLWYRAPE 181
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 13/113 (11%)
Query: 629 EIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRV 687
EI +L + +H +++ L +G LV E M G L + + ++
Sbjct: 70 EIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ-----KFFSEREAS 124
Query: 688 TIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR----AKVADFGLVKN 736
+ + + VEYLHS Q +HRDLKPSNIL D+ ++ DFG K
Sbjct: 125 FVLHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ 174
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 697 VEYLHSLAQQSFIHRDLKPSNILIGDDMR---AKVADFGLVKNAPDGKYSVETRLAGTFG 753
+E ++ + Q +HRDLKP N+L+ + K+ADFGL G+ AGT G
Sbjct: 140 LESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGEQQAWFGFAGTPG 198
Query: 754 YLAPEYAGK 762
YL+PE K
Sbjct: 199 YLSPEVLRK 207
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 641 LVALLGYCINGSERL-LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEY 699
+ L C +RL V EY+ G L H+ V A ++A G+ +
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI-----QQVGRFKEPHAVFYAAEIAIGLFF 457
Query: 700 LHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK-NAPDGKYSVETR-LAGTFGYLAP 757
L S + I+RDLK N+++ + K+ADFG+ K N DG V T+ GT Y+AP
Sbjct: 458 LQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---VTTKXFCGTPDYIAP 511
Query: 758 E 758
E
Sbjct: 512 E 512
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Query: 603 PDGTKIAVK-RMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYM 661
P+ +AV + N + +F E + + H H+V L+G I + ++ E
Sbjct: 62 PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELC 120
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L L Y+ L + A ++ + YL S + F+HRD+ N+L+
Sbjct: 121 TLGELRSFL---QVRKYS-LDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVS 173
Query: 722 DDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
+ K+ DFGL + D Y ++ ++APE
Sbjct: 174 SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 210
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 14/114 (12%)
Query: 648 CINGSERL-LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQ 706
C +RL V EY+ G L H+ V A ++A G+ +L S +
Sbjct: 89 CFQTMDRLYFVMEYVNGGDLMYHI-----QQVGRFKEPHAVFYAAEIAIGLFFLQS---K 140
Query: 707 SFIHRDLKPSNILIGDDMRAKVADFGLVK-NAPDGKYSVETR-LAGTFGYLAPE 758
I+RDLK N+++ + K+ADFG+ K N DG V T+ GT Y+APE
Sbjct: 141 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---VTTKXFCGTPDYIAPE 191
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 27/168 (16%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSER--LLVYEYMPRGTLAQHLFEWHDHGYT---PLTW 683
EIA+L +++H ++++L ++ ++R L+++Y H+ ++H P+
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLW--HIIKFHRASKANKKPVQL 125
Query: 684 KQRVTIAL--DVARGVEYLHSLAQQSFIHRDLKPSNILI----GDDMRAKVADFGLVK-- 735
+ + +L + G+ YLH+ +HRDLKP+NIL+ + R K+AD G +
Sbjct: 126 PRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182
Query: 736 NAPDGKYSVETRLAGTFGYLAPE--YAGKH-------WMILCQMTGLI 774
N+P + + TF Y APE +H W I C L+
Sbjct: 183 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 230
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 681 LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA--- 737
LT + + + VA+G+E+L A + IHRDL NIL+ + K+ DFGL ++
Sbjct: 190 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 738 PDGKYSVETRLAGTFGYLAPE 758
PD + RL ++APE
Sbjct: 247 PDYVRKGDARLP--LKWMAPE 265
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Query: 620 NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYT 679
N S F+A ++++K+ H+HLV G C G E +LV E++ G+L +L + +
Sbjct: 54 NYSESFFEAA-SMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKK--NKNCI 110
Query: 680 PLTWKQRVTIALDVARGVEY-LHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735
+ WK L+VA+ + + +H L + + IH ++ NIL+ + K + +K
Sbjct: 111 NILWK------LEVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIK 161
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 11/153 (7%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K ++ T E E ++ ++ + ++V L+G C +LV E G L
Sbjct: 366 VAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPL- 422
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
H F P++ + V+ G++YL +++F+HR+L N+L+ + AK
Sbjct: 423 -HKFLVGKREEIPVS--NVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAK 476
Query: 728 VADFGLVK--NAPDGKYSVETRLAGTFGYLAPE 758
++DFGL K A D Y+ + + APE
Sbjct: 477 ISDFGLSKALGADDSYYTARSAGKWPLKWYAPE 509
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 681 LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA--- 737
LT + + + VA+G+E+L A + IHRDL NIL+ + K+ DFGL ++
Sbjct: 188 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 738 PDGKYSVETRLAGTFGYLAPE 758
PD + RL ++APE
Sbjct: 245 PDYVRKGDARLP--LKWMAPE 263
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Query: 603 PDGTKIAVK-RMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYM 661
P+ +AV + N + +F E + + H H+V L+G I + ++ E
Sbjct: 34 PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELC 92
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L L Y+ L + A ++ + YL S + F+HRD+ N+L+
Sbjct: 93 TLGELRSFL---QVRKYS-LDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVS 145
Query: 722 DDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
+ K+ DFGL + D Y ++ ++APE
Sbjct: 146 SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 681 LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA--- 737
LT + + + VA+G+E+L A + IHRDL NIL+ + K+ DFGL ++
Sbjct: 197 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 738 PDGKYSVETRLAGTFGYLAPE 758
PD + RL ++APE
Sbjct: 254 PDYVRKGDARLP--LKWMAPE 272
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 13/113 (11%)
Query: 629 EIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRV 687
EI +L + +H +++ L +G LV E M G L + + ++
Sbjct: 70 EIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF-----FSEREAS 124
Query: 688 TIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR----AKVADFGLVKN 736
+ + + VEYLHS Q +HRDLKPSNIL D+ ++ DFG K
Sbjct: 125 FVLHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ 174
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 57/132 (43%), Gaps = 13/132 (9%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
EI +L +++H +LV LL LV+EY L H + + G K +
Sbjct: 52 EIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVK---S 106
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK--NAPDGKYSVET 746
I + V + H + + IHRD+KP NILI K+ DFG + P Y E
Sbjct: 107 ITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE- 162
Query: 747 RLAGTFGYLAPE 758
T Y +PE
Sbjct: 163 --VATRWYRSPE 172
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 9/151 (5%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K + N + +F E + + H H+V L+G I + ++ E G L
Sbjct: 41 VAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELR 98
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727
L Y+ L + A ++ + YL S + F+HRD+ N+L+ + K
Sbjct: 99 SFL---QVRKYS-LDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVK 151
Query: 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
+ DFGL + D Y ++ ++APE
Sbjct: 152 LGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 681 LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA--- 737
LT + + + VA+G+E+L A + IHRDL NIL+ + K+ DFGL ++
Sbjct: 195 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 738 PDGKYSVETRLAGTFGYLAPE 758
PD + RL ++APE
Sbjct: 252 PDYVRKGDARLP--LKWMAPE 270
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Query: 603 PDGTKIAVK-RMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYM 661
P+ +AV + N + +F E + + H H+V L+G I + ++ E
Sbjct: 31 PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELC 89
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L L Y+ L + A ++ + YL S + F+HRD+ N+L+
Sbjct: 90 TLGELRSFL---QVRKYS-LDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVS 142
Query: 722 DDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
+ K+ DFGL + D Y ++ ++APE
Sbjct: 143 SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 179
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Query: 603 PDGTKIAVK-RMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYM 661
P+ +AV + N + +F E + + H H+V L+G I + ++ E
Sbjct: 36 PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELC 94
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L L Y+ L + A ++ + YL S + F+HRD+ N+L+
Sbjct: 95 TLGELRSFL---QVRKYS-LDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVS 147
Query: 722 DDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
+ K+ DFGL + D Y ++ ++APE
Sbjct: 148 SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 184
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 12/123 (9%)
Query: 641 LVALLGYCINGSERL-LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEY 699
+ + Y + ++L + + M G L HL + HG + A ++ G+E+
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ---HGV--FSEADMRFYAAEIILGLEH 307
Query: 700 LHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEY 759
+H+ + ++RDLKP+NIL+ + +++D GL + K GT GY+APE
Sbjct: 308 MHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEV 361
Query: 760 AGK 762
K
Sbjct: 362 LQK 364
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Query: 603 PDGTKIAVK-RMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYM 661
P+ +AV + N + +F E + + H H+V L+G I + ++ E
Sbjct: 39 PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELC 97
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L L Y+ L + A ++ + YL S + F+HRD+ N+L+
Sbjct: 98 TLGELRSFL---QVRKYS-LDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVS 150
Query: 722 DDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
+ K+ DFGL + D Y ++ ++APE
Sbjct: 151 SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 187
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 12/123 (9%)
Query: 641 LVALLGYCINGSERL-LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEY 699
+ + Y + ++L + + M G L HL + HG + A ++ G+E+
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ---HGV--FSEADMRFYAAEIILGLEH 307
Query: 700 LHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEY 759
+H+ + ++RDLKP+NIL+ + +++D GL + K GT GY+APE
Sbjct: 308 MHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEV 361
Query: 760 AGK 762
K
Sbjct: 362 LQK 364
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 12/123 (9%)
Query: 641 LVALLGYCINGSERL-LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEY 699
+ + Y + ++L + + M G L HL + HG + A ++ G+E+
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ---HGV--FSEADMRFYAAEIILGLEH 307
Query: 700 LHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEY 759
+H+ + ++RDLKP+NIL+ + +++D GL + K GT GY+APE
Sbjct: 308 MHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEV 361
Query: 760 AGK 762
K
Sbjct: 362 LQK 364
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Query: 603 PDGTKIAVK-RMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYM 661
P+ +AV + N + +F E + + H H+V L+G I + ++ E
Sbjct: 37 PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELC 95
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L L Y+ L + A ++ + YL S + F+HRD+ N+L+
Sbjct: 96 TLGELRSFL---QVRKYS-LDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVS 148
Query: 722 DDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
+ K+ DFGL + D Y ++ ++APE
Sbjct: 149 SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 185
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 12/123 (9%)
Query: 641 LVALLGYCINGSERL-LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEY 699
+ + Y + ++L + + M G L HL + HG + A ++ G+E+
Sbjct: 252 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ---HGV--FSEADMRFYAAEIILGLEH 306
Query: 700 LHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEY 759
+H+ + ++RDLKP+NIL+ + +++D GL + K GT GY+APE
Sbjct: 307 MHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEV 360
Query: 760 AGK 762
K
Sbjct: 361 LQK 363
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 629 EIAVLTKVR---HRHLVALLGYCINGS-----ERLLVYEYMPRGTLAQHLFEWHDHGYTP 680
E+A+L ++ H ++V L+ C + LV+E+ + Q L + D P
Sbjct: 61 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEH-----VDQDLRTYLDKAPPP 115
Query: 681 -LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739
L + + RG+++LH+ +HRDLKP NIL+ K+ADFGL +
Sbjct: 116 GLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLAR---- 168
Query: 740 GKYSVE---TRLAGTFGYLAPE 758
YS + T + T Y APE
Sbjct: 169 -IYSYQMALTPVVVTLWYRAPE 189
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 13/113 (11%)
Query: 629 EIAVLTKV-RHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRV 687
EI +L + +H +++ L +G +V E M G L + + ++
Sbjct: 65 EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQ-----KFFSEREAS 119
Query: 688 TIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD----MRAKVADFGLVKN 736
+ + + VEYLH+ Q +HRDLKPSNIL D+ ++ DFG K
Sbjct: 120 AVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ 169
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 16/167 (9%)
Query: 601 ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660
++P G + A K + + + + + + E + ++H ++V L LV++
Sbjct: 25 KIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDL 84
Query: 661 MPRGTLAQHLF--EWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
+ G L + + E++ +Q + V + H +HRDLKP N+
Sbjct: 85 VTGGELFEDIVAREYYSEADASHCIQQ-------ILESVNHCH---LNGIVHRDLKPENL 134
Query: 719 LIGDDMR---AKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGK 762
L+ + K+ADFGL G AGT GYL+PE K
Sbjct: 135 LLASKSKGAAVKLADFGLAIEV-QGDQQAWFGFAGTPGYLSPEVLRK 180
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNF 125
N +T I+ + + L+ ++P + +LT+L + N IA P LAN T+L + L NN
Sbjct: 68 NNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQI 124
Query: 126 TSVPTGCFDGLTNLQVLSLSDN-----------PNLAPWPFPNELT------KSTSLTTL 168
T + LTNL L LS N +L F N++T T+L L
Sbjct: 125 TDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERL 182
Query: 169 YMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTL 228
+ + + + +NL++L + N + P +++ L +N QL GTL
Sbjct: 183 DISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGIL-TNLDELSLNGNQLKDIGTL 239
Query: 229 DVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNIS 288
L+ +T L L NQ + P LS L +L L NQ++ + P + L AL N+
Sbjct: 240 ASLTNLTDLD---LANNQISNLAP-LSGLTKLTELKLGANQISNISPLA--GLTALTNLE 293
Query: 289 LQNNKLQGPYPL 300
L N+L+ P+
Sbjct: 294 LNENQLEDISPI 305
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 48/233 (20%)
Query: 221 QLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVIS 280
+LG+ ++D + + L Q+ NQ T P L L D+ + +NQ+ + P + +
Sbjct: 55 RLGIK-SIDGVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITPLA--N 110
Query: 281 LPALLNISLQNNKLQGPYPLFP-SKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGD 339
L L ++L NN++ PL + + ++ L N S+ +G +T+L Q++
Sbjct: 111 LTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG------LTSLQQLSF- 163
Query: 340 MGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQ 399
GN D P + + I+ +NK+ +IS A LT+L++L
Sbjct: 164 ------------GNQVTDLKPLANLTTLERLDIS-SNKV--SDIS-VLAKLTNLESLIAT 207
Query: 400 QNNLTGPIPDG--------------------LTKLASLQNLDVSNNNLSGKVP 432
N ++ P G L L +L +LD++NN +S P
Sbjct: 208 NNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP 260
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 57/124 (45%), Gaps = 17/124 (13%)
Query: 604 DGTKIAVKRMESNTMGN----KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659
DG A+KR + G+ L E A AVL + H H+V L+ E
Sbjct: 35 DGCIYAIKRSKKPLAGSVDEQNALREVYAH-AVLGQ--HSHVVRYFSAWAEDDHMLIQNE 91
Query: 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIA---LDVARGVEYLHSLAQQSFIHRDLKPS 716
Y G+LA + E Y +++ + + L V RG+ Y+HS+ S +H D+KPS
Sbjct: 92 YCNGGSLADAISE----NYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPS 144
Query: 717 NILI 720
NI I
Sbjct: 145 NIFI 148
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNF 125
N +T I+ + + L+ ++P + +LT+L + N IA P LAN T+L + L NN
Sbjct: 67 NNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQI 123
Query: 126 TSVPTGCFDGLTNLQVLSLSDN-----------PNLAPWPFPNELT------KSTSLTTL 168
T + LTNL L LS N +L F N++T T+L L
Sbjct: 124 TDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERL 181
Query: 169 YMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTL 228
+ + + + +NL++L + N + P +++ L +N QL GTL
Sbjct: 182 DISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGIL-TNLDELSLNGNQLKDIGTL 238
Query: 229 DVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNIS 288
L+ +T L L NQ + P LS L +L L NQ++ + P + L AL N+
Sbjct: 239 ASLTNLTDLD---LANNQISNLAP-LSGLTKLTELKLGANQISNISPLA--GLTALTNLE 292
Query: 289 LQNNKLQGPYPL 300
L N+L+ P+
Sbjct: 293 LNENQLEDISPI 304
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 48/233 (20%)
Query: 221 QLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVIS 280
+LG+ ++D + + L Q+ NQ T P L L D+ + +NQ+ + P + +
Sbjct: 54 RLGIK-SIDGVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITPLA--N 109
Query: 281 LPALLNISLQNNKLQGPYPLFP-SKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGD 339
L L ++L NN++ PL + + ++ L N S+ +G +T+L Q++
Sbjct: 110 LTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG------LTSLQQLSF- 162
Query: 340 MGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQ 399
GN D P + + I+ +NK+ +IS A LT+L++L
Sbjct: 163 ------------GNQVTDLKPLANLTTLERLDIS-SNKV--SDIS-VLAKLTNLESLIAT 206
Query: 400 QNNLTGPIPDG--------------------LTKLASLQNLDVSNNNLSGKVP 432
N ++ P G L L +L +LD++NN +S P
Sbjct: 207 NNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP 259
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 57/124 (45%), Gaps = 17/124 (13%)
Query: 604 DGTKIAVKRMESNTMGN----KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659
DG A+KR + G+ L E A AVL + H H+V L+ E
Sbjct: 33 DGCIYAIKRSKKPLAGSVDEQNALREVYAH-AVLGQ--HSHVVRYFSAWAEDDHMLIQNE 89
Query: 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIA---LDVARGVEYLHSLAQQSFIHRDLKPS 716
Y G+LA + E Y +++ + + L V RG+ Y+HS+ S +H D+KPS
Sbjct: 90 YCNGGSLADAISE----NYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPS 142
Query: 717 NILI 720
NI I
Sbjct: 143 NIFI 146
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 11/157 (7%)
Query: 605 GTKIAVKRMESNTMGNKGLS--EFQAEIAVLTKVRHRHLVALLGYCINGSERL-LVYEYM 661
G A+K ++ T+ K + + E VL +R + L Y +L L+ +Y+
Sbjct: 82 GKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYI 141
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721
G L HL + T + ++ +E+LH L I+RD+K NIL+
Sbjct: 142 NGGELFTHLSQ-----RERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLD 193
Query: 722 DDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
+ + DFGL K + GT Y+AP+
Sbjct: 194 SNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPD 230
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 57/124 (45%), Gaps = 17/124 (13%)
Query: 604 DGTKIAVKRMESNTMGN----KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659
DG A+KR + G+ L E A AVL + H H+V L+ E
Sbjct: 33 DGCIYAIKRSKKPLAGSVDEQNALREVYAH-AVLGQ--HSHVVRYFSAWAEDDHMLIQNE 89
Query: 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIA---LDVARGVEYLHSLAQQSFIHRDLKPS 716
Y G+LA + E Y +++ + + L V RG+ Y+HS+ S +H D+KPS
Sbjct: 90 YCNGGSLADAISE----NYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPS 142
Query: 717 NILI 720
NI I
Sbjct: 143 NIFI 146
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRL 748
IA+ + + +E+LHS + S IHRD+KPSN+LI + K DFG+ D +
Sbjct: 141 IAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDD--VAKDID 196
Query: 749 AGTFGYLAPE 758
AG Y APE
Sbjct: 197 AGCKPYXAPE 206
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 85/226 (37%), Gaps = 55/226 (24%)
Query: 70 TISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVP 129
+ L + +S S L +L+ L N++ P+L +SL ++ + +N VP
Sbjct: 82 ALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP--SSLVELRIHDNRIRKVP 139
Query: 130 TGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNL 189
G F GL N+ + + NP ++N+ G P FD L
Sbjct: 140 KGVFSGLRNMNCIEMGGNP---------------------LENS---GFEPGAFDGLK-L 174
Query: 190 QNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTG 249
LR+S TG +P ++ L ++ L N+
Sbjct: 175 NYLRISEAKLTG-IPKDLPET--------------------------LNELHLDHNKIQA 207
Query: 250 -PIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKL 294
+ DL + L+ L L NQ+ + S+ LP L + L NNKL
Sbjct: 208 IELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKL 253
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 57/124 (45%), Gaps = 17/124 (13%)
Query: 604 DGTKIAVKRMESNTMGN----KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659
DG A+KR + G+ L E A AVL + H H+V L+ E
Sbjct: 31 DGCIYAIKRSKKPLAGSVDEQNALREVYAH-AVLGQ--HSHVVRYFSAWAEDDHMLIQNE 87
Query: 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIA---LDVARGVEYLHSLAQQSFIHRDLKPS 716
Y G+LA + E Y +++ + + L V RG+ Y+HS+ S +H D+KPS
Sbjct: 88 YCNGGSLADAISE----NYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPS 140
Query: 717 NILI 720
NI I
Sbjct: 141 NIFI 144
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 111/255 (43%), Gaps = 36/255 (14%)
Query: 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNF 125
N +T I+ + + L+ ++P + +LT+L + N IA P LAN T+L + L NN
Sbjct: 63 NNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQI 119
Query: 126 TSV--------------------PTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSL 165
T + GLT+LQ LS S N P N T+L
Sbjct: 120 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKPLANL----TTL 175
Query: 166 TTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLS 225
L + + + + +NL++L + N + P +++ L +N QL
Sbjct: 176 ERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGIL-TNLDELSLNGNQLKDI 232
Query: 226 GTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALL 285
GTL L+ +T L L NQ + P LS L +L L NQ++ + P + L AL
Sbjct: 233 GTLASLTNLTDLD---LANNQISNLAP-LSGLTKLTELKLGANQISNISPLA--GLTALT 286
Query: 286 NISLQNNKLQGPYPL 300
N+ L N+L+ P+
Sbjct: 287 NLELNENQLEDISPI 301
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 47/233 (20%)
Query: 221 QLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVIS 280
+LG+ ++D + + L Q+ NQ T P L L D+ + +NQ+ + P + +
Sbjct: 50 RLGIK-SIDGVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITPLA--N 105
Query: 281 LPALLNISLQNNKLQGPYPLFP-SKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGD 339
L L ++L NN++ PL + + ++ L N S+ +G +T+L Q+
Sbjct: 106 LTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG------LTSLQQL--- 156
Query: 340 MGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQ 399
S+ N D P + + I+ +NK+ +IS A LT+L++L
Sbjct: 157 ---------SFSSNQVTDLKPLANLTTLERLDIS-SNKV--SDIS-VLAKLTNLESLIAT 203
Query: 400 QNNLTGPIPDG--------------------LTKLASLQNLDVSNNNLSGKVP 432
N ++ P G L L +L +LD++NN +S P
Sbjct: 204 NNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP 256
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737
+ + Y+HS Q IHR+LKP NI I + K+ DFGL KN
Sbjct: 125 ILEALSYIHS---QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNV 166
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 20/126 (15%)
Query: 30 SVMLKLAQSLQNLPSDWSSTSSTGY---CEWTGINCDNSNRVTTISLAKSGLSGT----L 82
++M K SL+ L +S +S Y C W + + ++L+ + L+G+ L
Sbjct: 396 ALMTKNMSSLETLDVSLNSLNSHAYDRTCAW-------AESILVLNLSSNMLTGSVFRCL 448
Query: 83 SPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVL 142
P++ + L N I + + +LQ++ + +N SVP G FD LT+LQ +
Sbjct: 449 PPKV------KVLDLHNNRIMSIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYI 502
Query: 143 SLSDNP 148
L DNP
Sbjct: 503 WLHDNP 508
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 16/167 (9%)
Query: 601 ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660
++P G + A K + + + + + + E + ++H ++V L LV++
Sbjct: 25 KIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDL 84
Query: 661 MPRGTLAQHLF--EWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
+ G L + + E++ +Q + V + H +HRDLKP N+
Sbjct: 85 VTGGELFEDIVAREYYSEADASHCIQQ-------ILESVNHCHL---NGIVHRDLKPENL 134
Query: 719 LIGDDMR---AKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGK 762
L+ + K+ADFGL G AGT GYL+PE K
Sbjct: 135 LLASKSKGAAVKLADFGLAIEV-QGDQQAWFGFAGTPGYLSPEVLRK 180
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 111/255 (43%), Gaps = 36/255 (14%)
Query: 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNF 125
N +T I+ + + L+ ++P + +LT+L + N IA P LAN T+L + L NN
Sbjct: 63 NNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQI 119
Query: 126 TSV--------------------PTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSL 165
T + GLT+LQ LS S N P N T+L
Sbjct: 120 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKPLANL----TTL 175
Query: 166 TTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLS 225
L + + + + +NL++L + N + P +++ L +N QL
Sbjct: 176 ERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGIL-TNLDELSLNGNQLKDI 232
Query: 226 GTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALL 285
GTL L+ +T L L NQ + P LS L +L L NQ++ + P + L AL
Sbjct: 233 GTLASLTNLTDLD---LANNQISNLAP-LSGLTKLTELKLGANQISNISPLA--GLTALT 286
Query: 286 NISLQNNKLQGPYPL 300
N+ L N+L+ P+
Sbjct: 287 NLELNENQLEDISPI 301
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 47/233 (20%)
Query: 221 QLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVIS 280
+LG+ ++D + + L Q+ NQ T P L L D+ + +NQ+ + P + +
Sbjct: 50 RLGIK-SIDGVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITPLA--N 105
Query: 281 LPALLNISLQNNKLQGPYPLFP-SKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGD 339
L L ++L NN++ PL + + ++ L N S+ +G +T+L Q+
Sbjct: 106 LTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG------LTSLQQL--- 156
Query: 340 MGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQ 399
S+ N D P + + I+ +NK+ +IS A LT+L++L
Sbjct: 157 ---------SFSSNQVTDLKPLANLTTLERLDIS-SNKV--SDIS-VLAKLTNLESLIAT 203
Query: 400 QNNLTGPIPDG--------------------LTKLASLQNLDVSNNNLSGKVP 432
N ++ P G L L +L +LD++NN +S P
Sbjct: 204 NNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP 256
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNF 125
N +T I+ + + L+ ++P + +LT+L + N IA P LAN T+L + L NN
Sbjct: 63 NNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQI 119
Query: 126 TSVPTGCFDGLTNLQVLSLSDN-----------PNLAPWPFPNELT------KSTSLTTL 168
T + LTNL L LS N +L F N++T T+L L
Sbjct: 120 TDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFGNQVTDLKPLANLTTLERL 177
Query: 169 YMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTL 228
+ + + + +NL++L + N + P +++ L +N QL GTL
Sbjct: 178 DISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGIL-TNLDELSLNGNQLKDIGTL 234
Query: 229 DVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNIS 288
L+ +T L L NQ + P LS L +L L NQ++ + P + L AL N+
Sbjct: 235 ASLTNLTDLD---LANNQISNLAP-LSGLTKLTELKLGANQISNISPLA--GLTALTNLE 288
Query: 289 LQNNKLQGPYPL 300
L N+L+ P+
Sbjct: 289 LNENQLEDISPI 300
Score = 29.3 bits (64), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 48/233 (20%)
Query: 221 QLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVIS 280
+LG+ ++D + + L Q+ NQ T P L L D+ + +NQ+ + P + +
Sbjct: 50 RLGIK-SIDGVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITPLA--N 105
Query: 281 LPALLNISLQNNKLQGPYPLFP-SKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGD 339
L L ++L NN++ PL + + ++ L N S+ +G +T+L Q+
Sbjct: 106 LTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG------LTSLQQLNF- 158
Query: 340 MGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQ 399
GN D P + + I+ +NK+ +IS A LT+L++L
Sbjct: 159 ------------GNQVTDLKPLANLTTLERLDIS-SNKV--SDIS-VLAKLTNLESLIAT 202
Query: 400 QNNLTGPIPDG--------------------LTKLASLQNLDVSNNNLSGKVP 432
N ++ P G L L +L +LD++NN +S P
Sbjct: 203 NNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP 255
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVT 688
EI+++ +++H ++V L ++ LV+E+M + + G TP + +
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFMDND--LKKYMDSRTVGNTPRGLELNLV 110
Query: 689 --IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK--NAPDGKYSV 744
+ +G+ + H + +HRDLKP N+LI + K+ DFGL + P +S
Sbjct: 111 KYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSS 167
Query: 745 ETRLAGTFGYLAPE 758
E T Y AP+
Sbjct: 168 E---VVTLWYRAPD 178
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNF 125
N +T I+ + + L+ ++P + +LT+L + N IA P LAN T+L + L NN
Sbjct: 63 NNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQI 119
Query: 126 TSVPTGCFDGLTNLQVLSLSDN-----------PNLAPWPFPNELT------KSTSLTTL 168
T + LTNL L LS N +L F N++T T+L L
Sbjct: 120 TDI--DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFGNQVTDLKPLANLTTLERL 177
Query: 169 YMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTL 228
+ + + + +NL++L + N + P +++ L +N QL GTL
Sbjct: 178 DISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGIL-TNLDELSLNGNQLKDIGTL 234
Query: 229 DVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNIS 288
L+ +T L L NQ + P LS L +L L NQ++ + P + L AL N+
Sbjct: 235 ASLTNLTDLD---LANNQISNLAP-LSGLTKLTELKLGANQISNISPLA--GLTALTNLE 288
Query: 289 LQNNKLQGPYPL 300
L N+L+ P+
Sbjct: 289 LNENQLEDISPI 300
Score = 29.3 bits (64), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 48/233 (20%)
Query: 221 QLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVIS 280
+LG+ ++D + + L Q+ NQ T P L L D+ + +NQ+ + P + +
Sbjct: 50 RLGIK-SIDGVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITPLA--N 105
Query: 281 LPALLNISLQNNKLQGPYPLFP-SKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGD 339
L L ++L NN++ PL + + ++ L N S+ +G +T+L Q+
Sbjct: 106 LTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG------LTSLQQLNF- 158
Query: 340 MGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQ 399
GN D P + + I+ +NK+ +IS A LT+L++L
Sbjct: 159 ------------GNQVTDLKPLANLTTLERLDIS-SNKV--SDIS-VLAKLTNLESLIAT 202
Query: 400 QNNLTGPIPDG--------------------LTKLASLQNLDVSNNNLSGKVP 432
N ++ P G L L +L +LD++NN +S P
Sbjct: 203 NNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP 255
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 66/158 (41%), Gaps = 23/158 (14%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K + N + +F E + + H H+V L+G I + ++ E G L
Sbjct: 421 VAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELR 478
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLA-------QQSFIHRDLKPSNILI 720
L Q +LD+A + Y + L+ + F+HRD+ N+L+
Sbjct: 479 SFL--------------QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 524
Query: 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
+ K+ DFGL + D Y ++ ++APE
Sbjct: 525 SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 562
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 18/155 (11%)
Query: 605 GTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGSER-------L 655
G + A+KR+ SN N+ + + E+ + K+ H ++V G E
Sbjct: 53 GREYALKRLLSNEEEKNRAIIQ---EVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEF 109
Query: 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
L+ + +G L + L + G PL+ + I R V+++H + IHRDLK
Sbjct: 110 LLLTELCKGQLVEFLKKMESRG--PLSCDTVLKIFYQTCRAVQHMHR-QKPPIIHRDLKV 166
Query: 716 SNILIGDDMRAKVADFG---LVKNAPDGKYSVETR 747
N+L+ + K+ DFG + + PD +S + R
Sbjct: 167 ENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRR 201
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 23/167 (13%)
Query: 605 GTKIAVKRMESNTMGNKGLSEF-QAEIAVLTKVRHRHLVALLGY--CINGS--ERLLVYE 659
G ++AVK S + S F +AEI +RH +++ + NG+ + LV +
Sbjct: 65 GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 120
Query: 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLH-----SLAQQSFIHRDLK 714
Y G+L +L + YT +T + + +AL A G+ +LH + + + HRDLK
Sbjct: 121 YHEHGSLFDYL-----NRYT-VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 174
Query: 715 PSNILIGDDMRAKVADFGLV---KNAPDGKYSVETRLAGTFGYLAPE 758
NIL+ + +AD GL +A D GT Y+APE
Sbjct: 175 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 221
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 130/310 (41%), Gaps = 38/310 (12%)
Query: 163 TSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQL 222
+S+ L + + +F L F++ +L+ L L+YN +F D NL + +
Sbjct: 266 SSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLD--NLQVLNLSY 323
Query: 223 GLSGTL--DVLSGMTQLRQVWLHKNQFTGPIPD--LSKCESLFDLSLRDNQLTGV--VPA 276
L G L G+ ++ + L KN I D E L L LRDN LT + +P+
Sbjct: 324 NLLGELYSSNFYGLPKVAYIDLQKNH-IAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPS 382
Query: 277 ---------SVISLPAL-LN---ISLQNNKLQG----PYPLFPSKVQKVSLDHNNFCKNS 319
+++LP + L I L N+L+ + L +Q + L+ N F S
Sbjct: 383 IPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCS 442
Query: 320 SDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLL 379
D +P + L +G +L +WE D + ++ Q + N N L
Sbjct: 443 GDQTPSENPSLEQLF-----LG-ENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLP 496
Query: 380 AGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVPDFGSNVK 439
G +++LT+L+ L L N LT + L A+L+ LD+S N L PD ++
Sbjct: 497 PG----VFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLS 550
Query: 440 FTVSPGNPFI 449
N FI
Sbjct: 551 VLDITHNKFI 560
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 113 TSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDN 147
+ LQ +YL++N S+P G F LT L+ LSL+ N
Sbjct: 480 SHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSN 514
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 629 EIAVLTKVR---HRHLVALLGYCINGS-----ERLLVYEYMPRGTLAQHLFEWHDHGYTP 680
E+A+L ++ H ++V L+ C + LV+E+ + Q L + D P
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEH-----VDQDLRTYLDKAPPP 107
Query: 681 -LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739
L + + RG+++LH+ +HRDLKP NIL+ K+ADFGL +
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLAR---- 160
Query: 740 GKYSVETRL---AGTFGYLAPE 758
YS + L T Y APE
Sbjct: 161 -IYSYQMALDPVVVTLWYRAPE 181
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 106/248 (42%), Gaps = 28/248 (11%)
Query: 54 YCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSF---QMNNIAGAIPSLA 110
Y + I +N VT + L L + S Q+E L+ Q+ I + A
Sbjct: 42 YFGFEDITLNNQKIVTFKNSTMRKLPAAL---LDSFRQVELLNLNDLQIEEIDTY--AFA 96
Query: 111 NATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWP---FPNELTKSTSLTT 167
A ++Q +Y+ N +P F + L VL L N +L+ P F N + LTT
Sbjct: 97 YAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERN-DLSSLPRGIFHN----TPKLTT 151
Query: 168 LYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGT 227
L M N N+ + D F + ++LQNL+LS N T S I +L+ + L T
Sbjct: 152 LSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT-----HVDLSLIPSLFHANVSYNLLST 206
Query: 228 LDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNI 287
L + + +L N GP+ L L L+ N LT A +++ P L+ +
Sbjct: 207 LAIPIAVEELDASHNSINVVRGPVN-----VELTILKLQHNNLTDT--AWLLNYPGLVEV 259
Query: 288 SLQNNKLQ 295
L N+L+
Sbjct: 260 DLSYNELE 267
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 629 EIAVLTKVR---HRHLVALLGYCINGS-----ERLLVYEYMPRGTLAQHLFEWHDHGYTP 680
E+A+L ++ H ++V L+ C + LV+E+ + Q L + D P
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEH-----VDQDLRTYLDKAPPP 107
Query: 681 -LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739
L + + RG+++LH+ +HRDLKP NIL+ K+ADFGL +
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLAR---- 160
Query: 740 GKYSVETRL---AGTFGYLAPE 758
YS + L T Y APE
Sbjct: 161 -IYSYQMALFPVVVTLWYRAPE 181
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 603 PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRH-RHLVALLGYCINGSERLLVYEYM 661
P G +AVKR+ S T+ K + ++ V+ + ++V G + + E M
Sbjct: 45 PSGQIMAVKRIRS-TVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELM 103
Query: 662 PRG--TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQ-SFIHRDLKPSNI 718
++++ D P ++T+A V+ L+ L + IHRD+KPSNI
Sbjct: 104 STSFDKFYKYVYSVLD-DVIPEEILGKITLA-----TVKALNHLKENLKIIHRDIKPSNI 157
Query: 719 LIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
L+ K+ DFG+ D +TR AG Y+APE
Sbjct: 158 LLDRSGNIKLCDFGISGQLVDS--IAKTRDAGCRPYMAPE 195
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 12/110 (10%)
Query: 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLK 714
L++ E M G L + E D +T ++ I D+ +++LHS + HRD+K
Sbjct: 102 LIIMECMEGGELFSRIQERGDQAFTE---REAAEIMRDIGTAIQFLHS---HNIAHRDVK 155
Query: 715 PSNILI---GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAG 761
P N+L D K+ DFG K +++T + Y+APE G
Sbjct: 156 PENLLYTSKEKDAVLKLTDFGFAKETTQN--ALQTPCYTPY-YVAPEVLG 202
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 681 LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK---VADFGLVKNA 737
L+ K + +A + VE++HS +SF+HRD+KP N L+G RA + DFGL K
Sbjct: 100 LSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156
Query: 738 PD 739
D
Sbjct: 157 RD 158
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 23/167 (13%)
Query: 605 GTKIAVKRMESNTMGNKGLSEF-QAEIAVLTKVRHRHLVALLGY--CINGS--ERLLVYE 659
G ++AVK S + S F +AEI +RH +++ + NG+ + LV +
Sbjct: 52 GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 107
Query: 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLH-----SLAQQSFIHRDLK 714
Y G+L +L + YT +T + + +AL A G+ +LH + + + HRDLK
Sbjct: 108 YHEHGSLFDYL-----NRYT-VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 161
Query: 715 PSNILIGDDMRAKVADFGLV---KNAPDGKYSVETRLAGTFGYLAPE 758
NIL+ + +AD GL +A D GT Y+APE
Sbjct: 162 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 208
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 12/110 (10%)
Query: 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLK 714
L++ E M G L + E D +T ++ I D+ +++LHS + HRD+K
Sbjct: 83 LIIMECMEGGELFSRIQERGDQAFTE---REAAEIMRDIGTAIQFLHS---HNIAHRDVK 136
Query: 715 PSNILI---GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAG 761
P N+L D K+ DFG K +++T + Y+APE G
Sbjct: 137 PENLLYTSKEKDAVLKLTDFGFAKETTQN--ALQTPCYTPY-YVAPEVLG 183
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 681 LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735
LT + TI ++ G +++H + IHRDLKP+N L+ D K+ DFGL +
Sbjct: 128 LTEQHVKTILYNLLLGEKFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 69/180 (38%), Gaps = 28/180 (15%)
Query: 67 RVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP--SLANATSLQDIYLDNNN 124
R+ T+ L + GL L L+ L Q +N A+P + + +L ++L N
Sbjct: 105 RLHTLHLDRCGLQELGPGLFRGLAALQYLYLQ-DNALQALPDDTFRDLGNLTHLFLHGNR 163
Query: 125 FTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFD 184
+SVP F GL +L L L N P+ L TLY+ N+ L +
Sbjct: 164 ISSVPERAFRGLHSLDRLLLHQNR--VAHVHPHAFRDLGRLMTLYLFANNLSALPTEALA 221
Query: 185 SFSNLQNLRLSYN----------------NFTGS-------LPASFAKSDIQNLWMNDQQ 221
LQ LRL+ N F GS LP A D++ L ND Q
Sbjct: 222 PLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQ 281
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 99/236 (41%), Gaps = 13/236 (5%)
Query: 62 CDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLD 121
C N +VTT S + GL ++ ++ +++++ A S +L ++L
Sbjct: 7 CYNEPKVTT-SCPQQGLQAVPVGIPAASQRIFLHGNRISHVPAA--SFRACRNLTILWLH 63
Query: 122 NNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPD 181
+N + F GL L+ L LSDN L P L TL++D + L P
Sbjct: 64 SNVLARIDAAAFTGLALLEQLDLSDNAQLRSVD-PATFHGLGRLHTLHLDRCGLQELGPG 122
Query: 182 FFDSFSNLQNLRLSYNNFTGSLPASFAK-SDIQNLWMNDQQLGLSGTLDVLSGMTQLRQV 240
F + LQ L L N +F ++ +L+++ ++ S G+ L ++
Sbjct: 123 LFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRIS-SVPERAFRGLHSLDRL 181
Query: 241 WLHKNQFTGPIP----DLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNN 292
LH+N+ P DL + L L L N L+ + ++ L AL + L +N
Sbjct: 182 LLHQNRVAHVHPHAFRDLGR---LMTLYLFANNLSALPTEALAPLRALQYLRLNDN 234
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 10/133 (7%)
Query: 627 QAEIAVLTKVRHRHLVALLGYCINGSERLL-VYEYMPRGTLAQHLFEWHDHGYTPLTWKQ 685
Q E V + + + L C RL V EY+ G L H+ L +
Sbjct: 100 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM-----QRQRKLPEEH 154
Query: 686 RVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVE 745
+ +++ + YLH ++ I+RDLK N+L+ + K+ D+G+ K +
Sbjct: 155 ARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS 211
Query: 746 TRLAGTFGYLAPE 758
T GT Y+APE
Sbjct: 212 T-FCGTPNYIAPE 223
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 16/163 (9%)
Query: 601 ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660
+L G + A K + + + + + + E + ++H ++V L LV++
Sbjct: 25 KLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDL 84
Query: 661 MPRGTLAQHLF--EWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNI 718
+ G L + + E++ +Q + V + H Q +HRDLKP N+
Sbjct: 85 VTGGELFEDIVAREYYSEADASHCIQQ-------ILEAVLHCH---QMGVVHRDLKPENL 134
Query: 719 LIGDDMR---AKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
L+ + K+ADFGL G AGT GYL+PE
Sbjct: 135 LLASKCKGAAVKLADFGLAIEV-QGDQQAWFGFAGTPGYLSPE 176
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 705 QQSFIHRDLKPSNILIGDDMR---AKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAG 761
Q +HR+LKP N+L+ ++ K+ADFGL +G+ AGT GYL+PE
Sbjct: 128 QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFGFAGTPGYLSPEVLR 186
Query: 762 K 762
K
Sbjct: 187 K 187
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 23/158 (14%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K + N + +F E + + H H+V L+G I + ++ E G L
Sbjct: 41 VAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELR 98
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLA-------QQSFIHRDLKPSNILI 720
L Q +LD+A + Y + L+ + F+HRD+ N+L+
Sbjct: 99 SFL--------------QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 144
Query: 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ DFGL + D Y ++ ++APE
Sbjct: 145 SATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 69/180 (38%), Gaps = 28/180 (15%)
Query: 67 RVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP--SLANATSLQDIYLDNNN 124
R+ T+ L + GL L L+ L Q +N A+P + + +L ++L N
Sbjct: 106 RLHTLHLDRCGLQELGPGLFRGLAALQYLYLQ-DNALQALPDDTFRDLGNLTHLFLHGNR 164
Query: 125 FTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFD 184
+SVP F GL +L L L N P+ L TLY+ N+ L +
Sbjct: 165 ISSVPERAFRGLHSLDRLLLHQN--RVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALA 222
Query: 185 SFSNLQNLRLSYN----------------NFTGS-------LPASFAKSDIQNLWMNDQQ 221
LQ LRL+ N F GS LP A D++ L ND Q
Sbjct: 223 PLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQ 282
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 99/236 (41%), Gaps = 13/236 (5%)
Query: 62 CDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLD 121
C N +VTT S + GL ++ ++ +++++ A S +L ++L
Sbjct: 8 CYNEPKVTT-SCPQQGLQAVPVGIPAASQRIFLHGNRISHVPAA--SFRACRNLTILWLH 64
Query: 122 NNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPD 181
+N + F GL L+ L LSDN L P L TL++D + L P
Sbjct: 65 SNVLARIDAAAFTGLALLEQLDLSDNAQLRSVD-PATFHGLGRLHTLHLDRCGLQELGPG 123
Query: 182 FFDSFSNLQNLRLSYNNFTGSLPASFAK-SDIQNLWMNDQQLGLSGTLDVLSGMTQLRQV 240
F + LQ L L N +F ++ +L+++ ++ S G+ L ++
Sbjct: 124 LFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRIS-SVPERAFRGLHSLDRL 182
Query: 241 WLHKNQFTGPIP----DLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNN 292
LH+N+ P DL + L L L N L+ + ++ L AL + L +N
Sbjct: 183 LLHQNRVAHVHPHAFRDLGR---LMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 10/131 (7%)
Query: 629 EIAVLTKVRHRHLVALLGYCINGSERLL-VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRV 687
E +L+ R+ + L C +RL V E++ G L H+ +
Sbjct: 73 EKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI-----QKSRRFDEARAR 127
Query: 688 TIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETR 747
A ++ + +LH + I+RDLK N+L+ + K+ADFG+ K + T
Sbjct: 128 FYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT- 183
Query: 748 LAGTFGYLAPE 758
GT Y+APE
Sbjct: 184 FCGTPDYIAPE 194
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 681 LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735
LT + TI ++ G ++H + IHRDLKP+N L+ D KV DFGL +
Sbjct: 126 LTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Query: 607 KIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTL 666
++A++ ++ L F+ E+ + RH ++V +G C++ ++ TL
Sbjct: 57 EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTL 116
Query: 667 AQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726
+ + L + IA ++ +G+ YLH+ + +H+DLK N+ D+ +
Sbjct: 117 YSVVRD----AKIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFY-DNGKV 168
Query: 727 KVADFGLVKNA---PDGKYSVETRLA-GTFGYLAPE 758
+ DFGL + G+ + R+ G +LAPE
Sbjct: 169 VITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPE 204
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 23/167 (13%)
Query: 605 GTKIAVKRMESNTMGNKGLSEF-QAEIAVLTKVRHRHLVALLGY--CINGS--ERLLVYE 659
G ++AVK S + S F +AEI +RH +++ + NG+ + LV +
Sbjct: 27 GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 82
Query: 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLH-----SLAQQSFIHRDLK 714
Y G+L +L + YT +T + + +AL A G+ +LH + + + HRDLK
Sbjct: 83 YHEHGSLFDYL-----NRYT-VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 136
Query: 715 PSNILIGDDMRAKVADFGLVKNAPDGKYSVET---RLAGTFGYLAPE 758
NIL+ + +AD GL +++ GT Y+APE
Sbjct: 137 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 183
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 680 PLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG-DDMRAKVADFGLVK 735
PL + + RG++Y+HS + +HRDLKP+N+ I +D+ K+ DFGL +
Sbjct: 116 PLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLAR 169
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 23/167 (13%)
Query: 605 GTKIAVKRMESNTMGNKGLSEF-QAEIAVLTKVRHRHLVALLGY--CINGS--ERLLVYE 659
G ++AVK S + S F +AEI +RH +++ + NG+ + LV +
Sbjct: 29 GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 84
Query: 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLH-----SLAQQSFIHRDLK 714
Y G+L +L + YT +T + + +AL A G+ +LH + + + HRDLK
Sbjct: 85 YHEHGSLFDYL-----NRYT-VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 138
Query: 715 PSNILIGDDMRAKVADFGLVKNAPDGKYSVET---RLAGTFGYLAPE 758
NIL+ + +AD GL +++ GT Y+APE
Sbjct: 139 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 185
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 23/167 (13%)
Query: 605 GTKIAVKRMESNTMGNKGLSEF-QAEIAVLTKVRHRHLVALLGY--CINGS--ERLLVYE 659
G ++AVK S + S F +AEI +RH +++ + NG+ + LV +
Sbjct: 32 GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 87
Query: 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLH-----SLAQQSFIHRDLK 714
Y G+L +L + YT +T + + +AL A G+ +LH + + + HRDLK
Sbjct: 88 YHEHGSLFDYL-----NRYT-VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 141
Query: 715 PSNILIGDDMRAKVADFGLVKNAPDGKYSVET---RLAGTFGYLAPE 758
NIL+ + +AD GL +++ GT Y+APE
Sbjct: 142 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 188
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 13/161 (8%)
Query: 605 GTKIAVKRME-SNTMGNKGLS--EFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYM 661
G + AVK ++ + + GLS + + E ++ ++H H+V LL + +V+E+M
Sbjct: 49 GQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 108
Query: 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGV-EYLHSLAQQSFIHRDLKPSNILI 720
L + + D G+ +A R + E L + IHRD+KP N+L+
Sbjct: 109 DGADLCFEIVKRADAGFV-----YSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLL 163
Query: 721 G---DDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
+ K+ DFG+ + R+ GT ++APE
Sbjct: 164 ASKENSAPVKLGDFGVAIQLGESGLVAGGRV-GTPHFMAPE 203
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 23/167 (13%)
Query: 605 GTKIAVKRMESNTMGNKGLSEF-QAEIAVLTKVRHRHLVALLGY--CINGS--ERLLVYE 659
G ++AVK S + S F +AEI +RH +++ + NG+ + LV +
Sbjct: 26 GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81
Query: 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLH-----SLAQQSFIHRDLK 714
Y G+L +L + YT +T + + +AL A G+ +LH + + + HRDLK
Sbjct: 82 YHEHGSLFDYL-----NRYT-VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 135
Query: 715 PSNILIGDDMRAKVADFGLVKNAPDGKYSVET---RLAGTFGYLAPE 758
NIL+ + +AD GL +++ GT Y+APE
Sbjct: 136 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 182
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 106/248 (42%), Gaps = 28/248 (11%)
Query: 54 YCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSF---QMNNIAGAIPSLA 110
Y + I +N VT + L L + S Q+E L+ Q+ I + A
Sbjct: 36 YFGFEDITLNNQKIVTFKNSTMRKLPAAL---LDSFRQVELLNLNDLQIEEIDTY--AFA 90
Query: 111 NATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWP---FPNELTKSTSLTT 167
A ++Q +Y+ N +P F + L VL L N +L+ P F N + LTT
Sbjct: 91 YAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERN-DLSSLPRGIFHN----TPKLTT 145
Query: 168 LYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGT 227
L M N N+ + D F + ++LQNL+LS N T S I +L+ + L T
Sbjct: 146 LSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH-----VDLSLIPSLFHANVSYNLLST 200
Query: 228 LDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNI 287
L + + +L N GP+ L L L+ N LT A +++ P L+ +
Sbjct: 201 LAIPIAVEELDASHNSINVVRGPVN-----VELTILKLQHNNLTDT--AWLLNYPGLVEV 253
Query: 288 SLQNNKLQ 295
L N+L+
Sbjct: 254 DLSYNELE 261
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 23/158 (14%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K + N + +F E + + H H+V L+G I + ++ E G L
Sbjct: 421 VAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELR 478
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLA-------QQSFIHRDLKPSNILI 720
L Q +LD+A + Y + L+ + F+HRD+ N+L+
Sbjct: 479 SFL--------------QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 524
Query: 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
K+ DFGL + D Y ++ ++APE
Sbjct: 525 SATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 562
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 36/255 (14%)
Query: 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNF 125
N +T I+ + + L+ ++P + +LT+L + N IA P LAN T+L + L NN
Sbjct: 63 NNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQI 119
Query: 126 TSV--------------------PTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSL 165
T + GLT+LQ L+ S N P N T+L
Sbjct: 120 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLANL----TTL 175
Query: 166 TTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLS 225
L + + + + +NL++L + N + P +++ L +N QL
Sbjct: 176 ERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGIL-TNLDELSLNGNQLKDI 232
Query: 226 GTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALL 285
GTL L+ +T L L NQ + P LS L +L L NQ++ + P + L AL
Sbjct: 233 GTLASLTNLTDLD---LANNQISNLAP-LSGLTKLTELKLGANQISNISPLA--GLTALT 286
Query: 286 NISLQNNKLQGPYPL 300
N+ L N+L+ P+
Sbjct: 287 NLELNENQLEDISPI 301
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 99/233 (42%), Gaps = 47/233 (20%)
Query: 221 QLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVIS 280
+LG+ ++D + + L Q+ NQ T P L L D+ + +NQ+ + P + +
Sbjct: 50 RLGIK-SIDGVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITPLA--N 105
Query: 281 LPALLNISLQNNKLQGPYPLFP-SKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGD 339
L L ++L NN++ PL + + ++ L N S+ +G +T+L Q+
Sbjct: 106 LTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG------LTSLQQL--- 156
Query: 340 MGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQ 399
++ N D P + + I+ +NK+ +IS A LT+L++L
Sbjct: 157 ---------NFSSNQVTDLKPLANLTTLERLDIS-SNKV--SDIS-VLAKLTNLESLIAT 203
Query: 400 QNNLTGPIPDG--------------------LTKLASLQNLDVSNNNLSGKVP 432
N ++ P G L L +L +LD++NN +S P
Sbjct: 204 NNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP 256
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 68/163 (41%), Gaps = 18/163 (11%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN--GSERLLVYEYMP 662
G I VK ++ + +F E L H +++ +LG C + L+ + P
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXP 92
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRD-LKPSNILIG 721
G+L L H+ + Q V ALD ARG +LH+L + I R L ++ I
Sbjct: 93 YGSLYNVL---HEGTNFVVDQSQAVKFALDXARGXAFLHTL--EPLIPRHALNSRSVXID 147
Query: 722 DDMRAKV--ADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGK 762
+D A++ AD +P Y+ ++APE K
Sbjct: 148 EDXTARISXADVKFSFQSPGRXYAP--------AWVAPEALQK 182
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 13/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
GT+I + + + F+ EI ++ + H +++ L + ++ LV E G
Sbjct: 49 GTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGG 108
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI---G 721
L + + H + I DV V Y H L + HRDLKP N L
Sbjct: 109 ELFERVV--HKRVFRE---SDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDS 160
Query: 722 DDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
D K+ DFGL GK + T++ GT Y++P+
Sbjct: 161 PDSPLKLIDFGLAARFKPGKM-MRTKV-GTPYYVSPQ 195
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 693 VARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG-LVKNAPDGKYSVETRLA-G 750
+A V + S+ Q ++HRD+KP NIL+ + ++ADFG +K DG +V++ +A G
Sbjct: 181 LAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG--TVQSSVAVG 238
Query: 751 TFGYLAPE 758
T Y++PE
Sbjct: 239 TPDYISPE 246
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 689 IALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRL 748
I ++ RG+ +LH Q IHRD+K N+L+ ++ K+ DFG V D
Sbjct: 134 ICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFG-VSAQLDRTVGRRNTF 189
Query: 749 AGTFGYLAPE 758
GT ++APE
Sbjct: 190 IGTPYWMAPE 199
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
Query: 684 KQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD----MRAKVADFGLVKN 736
++ + + + VEYLH+ Q +HRDLKPSNIL D+ ++ DFG K
Sbjct: 116 REASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ 169
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 13/157 (8%)
Query: 605 GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664
GT+I + + + F+ EI ++ + H +++ L + ++ LV E G
Sbjct: 32 GTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGG 91
Query: 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI---G 721
L + + H + I DV V Y H L + HRDLKP N L
Sbjct: 92 ELFERVV--HKRVFRE---SDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDS 143
Query: 722 DDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
D K+ DFGL GK + T++ GT Y++P+
Sbjct: 144 PDSPLKLIDFGLAARFKPGKM-MRTKV-GTPYYVSPQ 178
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Query: 602 LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGSERLLVYEY 660
L +G + AVK +E ++ S E+ L + + +++++ L+ + + + LV+E
Sbjct: 35 LQNGKEYAVKIIEKQAGHSR--SRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEK 92
Query: 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720
+ G++ H+ + H ++ + DVA +++LH+ + HRDLKP NIL
Sbjct: 93 LQGGSILAHI-QKQKH----FNEREASRVVRDVAAALDFLHT---KGIAHRDLKPENILC 144
Query: 721 GDDMR---AKVADFGL 733
+ K+ DF L
Sbjct: 145 ESPEKVSPVKICDFDL 160
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 9/116 (7%)
Query: 622 GLSEFQAEIAVLTKVRHRHLVALLGYCINGSER--LLVYEYMPRGTLAQHLFEWHDHGYT 679
G + + EI +L ++RH++++ L+ N ++ +V EY G Q + +
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGM--QEMLDSVPEKRF 106
Query: 680 PLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735
P+ Q + G+EYLHS Q +H+D+KP N+L+ K++ G+ +
Sbjct: 107 PVC--QAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAE 157
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 28/165 (16%)
Query: 605 GTKIAVKRMESNTMGNKGLSE-FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663
G + AVK + + K E E+ +L ++ H +++ L + + LV E
Sbjct: 51 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 110
Query: 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVAR-------GVEYLHSLAQQSFIHRDLKPS 716
G L + + ++R + +D AR G+ Y+H + +HRDLKP
Sbjct: 111 GEL-----------FDEIISRKRFS-EVDAARIIRQVLSGITYMH---KNKIVHRDLKPE 155
Query: 717 NILI---GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
N+L+ D ++ DFGL + K + GT Y+APE
Sbjct: 156 NLLLESKSKDANIRIIDFGLSTHFEASKKMKDK--IGTAYYIAPE 198
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 14/135 (10%)
Query: 627 QAEIAVLTKVRHRHLVALLGYCINGSERLL-VYEYMPRGTLAQHLFEWHDHGYTPLTWKQ 685
Q E V + + + L C RL V EY+ G L H+ L +
Sbjct: 68 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM-----QRQRKLPEEH 122
Query: 686 RVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA--PDGKYS 743
+ +++ + YLH ++ I+RDLK N+L+ + K+ D+G+ K P S
Sbjct: 123 ARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS 179
Query: 744 VETRLAGTFGYLAPE 758
GT Y+APE
Sbjct: 180 X---FCGTPNYIAPE 191
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 65/158 (41%), Gaps = 23/158 (14%)
Query: 608 IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLA 667
+A+K + N + +F E + + H H+V L+G I + ++ E G L
Sbjct: 41 VAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELR 98
Query: 668 QHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLA-------QQSFIHRDLKPSNILI 720
L Q +LD+A + Y + L+ + F+HRD+ N+L+
Sbjct: 99 SFL--------------QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 144
Query: 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
+ K+ DFGL + D ++ ++APE
Sbjct: 145 SSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPE 182
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 23/167 (13%)
Query: 605 GTKIAVKR--MESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
G K+A+K+ ME+ G + EI +L ++H ++V L+ C R Y
Sbjct: 43 GQKVALKKVLMENEKEGFPITA--LREIKILQLLKHENVVNLIEIC-----RTKASPYNR 95
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIAL-DVAR-------GVEYLHSLAQQSFIHRDLK 714
+F++ +H L V L ++ R G+ Y+H + +HRD+K
Sbjct: 96 CKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMK 152
Query: 715 PSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAG---TFGYLAPE 758
+N+LI D K+ADFGL + K S R T Y PE
Sbjct: 153 AANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 10/133 (7%)
Query: 627 QAEIAVLTKVRHRHLVALLGYCINGSERLL-VYEYMPRGTLAQHLFEWHDHGYTPLTWKQ 685
Q E V + + + L C RL V EY+ G L H+ L +
Sbjct: 57 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM-----QRQRKLPEEH 111
Query: 686 RVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVE 745
+ +++ + YLH ++ I+RDLK N+L+ + K+ D+G+ K
Sbjct: 112 ARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-DTT 167
Query: 746 TRLAGTFGYLAPE 758
+ GT Y+APE
Sbjct: 168 SXFCGTPNYIAPE 180
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 10/133 (7%)
Query: 627 QAEIAVLTKVRHRHLVALLGYCINGSERLL-VYEYMPRGTLAQHLFEWHDHGYTPLTWKQ 685
Q E V + + + L C RL V EY+ G L H+ L +
Sbjct: 53 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM-----QRQRKLPEEH 107
Query: 686 RVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVE 745
+ +++ + YLH ++ I+RDLK N+L+ + K+ D+G+ K
Sbjct: 108 ARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-DTT 163
Query: 746 TRLAGTFGYLAPE 758
+ GT Y+APE
Sbjct: 164 SXFCGTPNYIAPE 176
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 14/87 (16%)
Query: 681 LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK-----VADFGLVK 735
T K + IA+ + +EY+HS ++ I+RD+KP N LIG K + DFGL K
Sbjct: 94 FTLKTVLMIAIQLLSRMEYVHS---KNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAK 150
Query: 736 NA--PDGKYSVETR----LAGTFGYLA 756
P+ K + R L GT Y++
Sbjct: 151 EYIDPETKKHIPYREHKSLTGTARYMS 177
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 12/67 (17%)
Query: 697 VEYLHSLAQQSFIHRDLKPSNILIGDDMRAK---VADFGLVKNAPDGK------YSVETR 747
+EY+HS ++FIHRD+KP N L+G + + DFGL K D + Y
Sbjct: 118 IEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKN 174
Query: 748 LAGTFGY 754
L GT Y
Sbjct: 175 LTGTARY 181
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 28/165 (16%)
Query: 605 GTKIAVKRMESNTMGNKGLSE-FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663
G + AVK + + K E E+ +L ++ H +++ L + + LV E
Sbjct: 74 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 133
Query: 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVAR-------GVEYLHSLAQQSFIHRDLKPS 716
G L + + ++R + +D AR G+ Y+H + +HRDLKP
Sbjct: 134 GEL-----------FDEIISRKRFS-EVDAARIIRQVLSGITYMH---KNKIVHRDLKPE 178
Query: 717 NILI---GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
N+L+ D ++ DFGL + K + GT Y+APE
Sbjct: 179 NLLLESKSKDANIRIIDFGLSTHFEASKKMKDK--IGTAYYIAPE 221
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 12/67 (17%)
Query: 697 VEYLHSLAQQSFIHRDLKPSNILIGDDMRAK---VADFGLVKNAPDGK------YSVETR 747
+EY+HS ++FIHRD+KP N L+G + + DFGL K D + Y
Sbjct: 118 IEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKN 174
Query: 748 LAGTFGY 754
L GT Y
Sbjct: 175 LTGTARY 181
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 13/194 (6%)
Query: 569 VAISIEVLRQVTDNFSEANILXXXXXXXXXXXELPD-GTKIAVKRMESNTMGNKG-LSEF 626
+ + ++ +R D+F ++ ++ G A+K M M +G +S F
Sbjct: 49 IVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCF 108
Query: 627 QAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQR 686
+ E VL R + L + + LV EY G L L ++ + + R
Sbjct: 109 REERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMA---R 165
Query: 687 VTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG-LVKNAPDGKYSVE 745
+A ++ ++ +H L ++HRD+KP NIL+ ++ADFG +K DG +V
Sbjct: 166 FYLA-EIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG--TVR 219
Query: 746 TRLA-GTFGYLAPE 758
+ +A GT YL+PE
Sbjct: 220 SLVAVGTPDYLSPE 233
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 28/165 (16%)
Query: 605 GTKIAVKRMESNTMGNKGLSE-FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663
G + AVK + + K E E+ +L ++ H +++ L + + LV E
Sbjct: 75 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 134
Query: 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVAR-------GVEYLHSLAQQSFIHRDLKPS 716
G L + + ++R + +D AR G+ Y+H + +HRDLKP
Sbjct: 135 GEL-----------FDEIISRKRFS-EVDAARIIRQVLSGITYMH---KNKIVHRDLKPE 179
Query: 717 NILI---GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
N+L+ D ++ DFGL + K + GT Y+APE
Sbjct: 180 NLLLESKSKDANIRIIDFGLSTHFEASKKMKDK--IGTAYYIAPE 222
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 77/174 (44%), Gaps = 23/174 (13%)
Query: 601 ELPDGTKIAVKRMESN-TMGNKGLSE---FQAEIAVLTKVR----HRHLVALLGYCINGS 652
L D ++A+K + N +G LS+ E+A+L KV H ++ LL +
Sbjct: 52 RLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQE 111
Query: 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRD 712
+LV E R AQ LF++ PL V +++ HS + +HRD
Sbjct: 112 GFMLVLE---RPLPAQDLFDYITE-KGPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRD 164
Query: 713 LKPSNILIGDDMR---AKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKH 763
+K NILI D+R AK+ DFG D Y T GT Y PE+ +H
Sbjct: 165 IKDENILI--DLRRGCAKLIDFGSGALLHDEPY---TDFDGTRVYSPPEWISRH 213
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA-KVADFGLVKNAPDGKYSVETRLAG 750
++ + ++Y HS Q +HRD+KP N++I ++R ++ D+GL + GK R+A
Sbjct: 135 ELLKALDYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-EYNVRVAS 190
Query: 751 TFGYLAPE---------YAGKHWMILCQMTGLIW 775
+ + PE Y+ W + C G+I+
Sbjct: 191 RY-FKGPELLVDLQDYDYSLDMWSLGCMFAGMIF 223
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 12/67 (17%)
Query: 697 VEYLHSLAQQSFIHRDLKPSNILIGDDMRAK---VADFGLVKNAPDGK------YSVETR 747
+EY+HS ++FIHRD+KP N L+G + + DFGL K D + Y
Sbjct: 116 IEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKN 172
Query: 748 LAGTFGY 754
L GT Y
Sbjct: 173 LTGTARY 179
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA-KVADFGLVKNAPDGKYSVETRLAG 750
++ + ++Y HS Q +HRD+KP N++I ++R ++ D+GL + GK R+A
Sbjct: 133 ELLKALDYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-EYNVRVAS 188
Query: 751 TFGYLAPE---------YAGKHWMILCQMTGLIW 775
+ + PE Y+ W + C G+I+
Sbjct: 189 RY-FKGPELLVDLQDYDYSLDMWSLGCMFAGMIF 221
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA-KVADFGLVKNAPDGKYSVETRLAG 750
++ + ++Y HS Q +HRD+KP N++I ++R ++ D+GL + GK R+A
Sbjct: 133 ELLKALDYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-EYNVRVAS 188
Query: 751 TFGYLAPE---------YAGKHWMILCQMTGLIW 775
+ + PE Y+ W + C G+I+
Sbjct: 189 RY-FKGPELLVDLQDYDYSLDMWSLGCMFAGMIF 221
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 23/167 (13%)
Query: 605 GTKIAVKR--MESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
G K+A+K+ ME+ G + EI +L ++H ++V L+ C R Y
Sbjct: 43 GQKVALKKVLMENEKEGFPITA--LREIKILQLLKHENVVNLIEIC-----RTKASPYNR 95
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIAL-DVAR-------GVEYLHSLAQQSFIHRDLK 714
+F++ +H L V L ++ R G+ Y+H + +HRD+K
Sbjct: 96 CKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMK 152
Query: 715 PSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAG---TFGYLAPE 758
+N+LI D K+ADFGL + K S R T Y PE
Sbjct: 153 AANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA-KVADFGLVKNAPDGKYSVETRLAG 750
++ + ++Y HS Q +HRD+KP N++I ++R ++ D+GL + GK R+A
Sbjct: 133 ELLKALDYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-EYNVRVAS 188
Query: 751 TFGYLAPE---------YAGKHWMILCQMTGLIW 775
+ + PE Y+ W + C G+I+
Sbjct: 189 RY-FKGPELLVDLQDYDYSLDMWSLGCMFAGMIF 221
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA-KVADFGLVKNAPDGKYSVETRLAG 750
++ + ++Y HS Q +HRD+KP N++I ++R ++ D+GL + GK R+A
Sbjct: 133 ELLKALDYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-EYNVRVAS 188
Query: 751 TFGYLAPE---------YAGKHWMILCQMTGLIW 775
+ + PE Y+ W + C G+I+
Sbjct: 189 RY-FKGPELLVDLQDYDYSLDMWSLGCMFAGMIF 221
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA-KVADFGLVKNAPDGKYSVETRLAG 750
++ + ++Y HS Q +HRD+KP N++I ++R ++ D+GL + GK R+A
Sbjct: 134 ELLKALDYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-EYNVRVAS 189
Query: 751 TFGYLAPE---------YAGKHWMILCQMTGLIW 775
+ + PE Y+ W + C G+I+
Sbjct: 190 RY-FKGPELLVDLQDYDYSLDMWSLGCMFAGMIF 222
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA-KVADFGLVKNAPDGKYSVETRLAG 750
++ + ++Y HS Q +HRD+KP N++I ++R ++ D+GL + GK R+A
Sbjct: 134 ELLKALDYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-EYNVRVAS 189
Query: 751 TFGYLAPE---------YAGKHWMILCQMTGLIW 775
+ + PE Y+ W + C G+I+
Sbjct: 190 RY-FKGPELLVDLQDYDYSLDMWSLGCMFAGMIF 222
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA-KVADFGLVKNAPDGKYSVETRLAG 750
++ + ++Y HS Q +HRD+KP N++I ++R ++ D+GL + GK R+A
Sbjct: 133 ELLKALDYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-EYNVRVAS 188
Query: 751 TFGYLAPE---------YAGKHWMILCQMTGLIW 775
+ + PE Y+ W + C G+I+
Sbjct: 189 RY-FKGPELLVDLQDYDYSLDMWSLGCMFAGMIF 221
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA-KVADFGLVKNAPDGKYSVETRLAG 750
++ + ++Y HS Q +HRD+KP N++I ++R ++ D+GL + GK R+A
Sbjct: 133 ELLKALDYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-EYNVRVAS 188
Query: 751 TFGYLAPE---------YAGKHWMILCQMTGLIW 775
+ + PE Y+ W + C G+I+
Sbjct: 189 RY-FKGPELLVDLQDYDYSLDMWSLGCMFAGMIF 221
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 692 DVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA-KVADFGLVKNAPDGKYSVETRLAG 750
++ + ++Y HS Q +HRD+KP N++I ++R ++ D+GL + GK R+A
Sbjct: 154 ELLKALDYCHS---QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK-EYNVRVAS 209
Query: 751 TFGYLAPE---------YAGKHWMILCQMTGLIW 775
+ + PE Y+ W + C G+I+
Sbjct: 210 RY-FKGPELLVDLQDYDYSLDMWSLGCMFAGMIF 242
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%)
Query: 710 HRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
HRD+KP NIL+ D A + DFG+ D K + GT Y APE
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPE 205
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 700 LHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG-LVKNAPDGKYSVETRLA-GTFGYLAP 757
+ S+ Q ++HRD+KP N+L+ + ++ADFG +K DG +V++ +A GT Y++P
Sbjct: 204 IDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDG--TVQSSVAVGTPDYISP 261
Query: 758 E 758
E
Sbjct: 262 E 262
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 185 SFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHK 244
+ N QN+RL+ S+PA +D Q LW+N+ Q+ V + L+Q++ +
Sbjct: 15 TLVNCQNIRLA------SVPAGIP-TDKQRLWLNNNQIT-KLEPGVFDHLVNLQQLYFNS 66
Query: 245 NQFTG-PIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNN 292
N+ T P K L L L DN L + + +L +L +I L NN
Sbjct: 67 NKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNN 115
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 13/93 (13%)
Query: 55 CEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATS 114
C+ T +NC N R+ ++ L + +T+LE G L N
Sbjct: 12 CDQTLVNCQNI-RLASVPAGIPTDKQRLWLNNNQITKLE---------PGVFDHLVN--- 58
Query: 115 LQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDN 147
LQ +Y ++N T++PTG FD LT L L L+DN
Sbjct: 59 LQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 49/127 (38%), Gaps = 16/127 (12%)
Query: 131 GCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQ 190
C L N Q + L+ P P T L+++N I L P FD NLQ
Sbjct: 11 SCDQTLVNCQNIRLASVPAGIP----------TDKQRLWLNNNQITKLEPGVFDHLVNLQ 60
Query: 191 NLRLSYNNFTGSLPASFAK-SDIQNLWMNDQQLGL--SGTLDVLSGMTQLRQVWLHKNQF 247
L + N T F K + + L +ND L G D L +T ++L+ N +
Sbjct: 61 QLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLT---HIYLYNNPW 117
Query: 248 TGPIPDL 254
D+
Sbjct: 118 DCECRDI 124
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 700 LHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG-LVKNAPDGKYSVETRLA-GTFGYLAP 757
+ S+ Q ++HRD+KP N+L+ + ++ADFG +K DG +V++ +A GT Y++P
Sbjct: 188 IDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDG--TVQSSVAVGTPDYISP 245
Query: 758 E 758
E
Sbjct: 246 E 246
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 23/167 (13%)
Query: 605 GTKIAVKR--MESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
G K+A+K+ ME+ G + EI +L ++H ++V L+ C R Y
Sbjct: 43 GQKVALKKVLMENEKEGFPITA--LREIKILQLLKHENVVNLIEIC-----RTKASPYNR 95
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIAL-DVAR-------GVEYLHSLAQQSFIHRDLK 714
+F++ +H L V L ++ R G+ Y+H + +HRD+K
Sbjct: 96 CKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMK 152
Query: 715 PSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAG---TFGYLAPE 758
+N+LI D K+ADFGL + K S R T Y PE
Sbjct: 153 AANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 71 ISLAKSGLSGTLSPEISSLTQLETLSFQMNNI-AGAIPSLANATSLQDIYLDNNNFTSVP 129
++L+++ L S +L +LE L N+I A S +L+++ LD N SVP
Sbjct: 328 LNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVP 387
Query: 130 TGCFDGLTNLQVLSLSDNP 148
G FD LT+LQ + L NP
Sbjct: 388 DGIFDRLTSLQKIWLHTNP 406
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 129/331 (38%), Gaps = 31/331 (9%)
Query: 113 TSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKS-TSLTTLYMD 171
+SL + LD N F + TG F+GL NL+VL+L+ NL K TSL L +
Sbjct: 79 SSLIILKLDYNQFLQLETGAFNGLANLEVLTLT-QCNLDGAVLSGNFFKPLTSLEMLVLR 137
Query: 172 NANIFGLIP-DFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDV 230
+ NI + P FF + L L++N S + D+ N G TL
Sbjct: 138 DNNIKKIQPASFFLNMRRFHVLDLTFNKV-----KSICEEDLLNFQ------GKHFTLLR 186
Query: 231 LSGMT--QLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNIS 288
LS +T + + WL + P K S+ L L N + A+
Sbjct: 187 LSSITLQDMNEYWLGWEKCGNPF----KNTSITTLDLSGNGFKESMAKRFFD--AIAGTK 240
Query: 289 LQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAG--KPCD---PQVTTLLQ-IAGDMGY 342
+Q+ L Y + S D +NF +A K CD ++ LL+ +
Sbjct: 241 IQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTD 300
Query: 343 PAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNN 402
L+ + N D F + ++ +NL+ L S + NL L+ L L N+
Sbjct: 301 LEQLTLAQNEINKIDDNAFWGLTH--LLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNH 358
Query: 403 LTGPIPDGLTKLASLQNLDVSNNNLSGKVPD 433
+ L +L+ L + N L VPD
Sbjct: 359 IRALGDQSFLGLPNLKELALDTNQLKS-VPD 388
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 49/222 (22%)
Query: 113 TSLQDIYLDNNNFT-SVPTGCFDGL--TNLQVLSLSDNPNLA----------PWPFPNEL 159
TS+ + L N F S+ FD + T +Q L LS++ N+ P F +
Sbjct: 212 TSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKG 271
Query: 160 TKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMND 219
+++ + T + + IF L+ F F++L+ L L+ N K D W
Sbjct: 272 LEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEIN--------KIDDNAFW--- 320
Query: 220 QQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPI-----PDLSKCESLFDLSLRDNQLTGVV 274
G+T L ++ L +N F G I +L K E L DLS N + +
Sbjct: 321 -------------GLTHLLKLNLSQN-FLGSIDSRMFENLDKLEVL-DLSY--NHIRALG 363
Query: 275 PASVISLPALLNISLQNNKLQG-PYPLFP--SKVQKVSLDHN 313
S + LP L ++L N+L+ P +F + +QK+ L N
Sbjct: 364 DQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 405
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 28/165 (16%)
Query: 605 GTKIAVKRMESNTMGNKGLSE-FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663
G + AVK + + K E E+ +L ++ H +++ L + + LV E
Sbjct: 57 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 116
Query: 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVAR-------GVEYLHSLAQQSFIHRDLKPS 716
G L + + ++R + +D AR G+ Y+H + +HRDLKP
Sbjct: 117 GEL-----------FDEIISRKRFS-EVDAARIIRQVLSGITYMH---KNKIVHRDLKPE 161
Query: 717 NILI---GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPE 758
N+L+ D ++ DFGL + K + GT Y+APE
Sbjct: 162 NLLLESKSKDANIRIIDFGLSTHFEASKKMKDK--IGTAYYIAPE 204
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 76/183 (41%), Gaps = 30/183 (16%)
Query: 605 GTKIAVKRMESNTMGNKGLSE-FQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663
G + AVK + + K E E+ +L ++ H ++ L + + LV E
Sbjct: 51 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTG 110
Query: 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVAR-------GVEYLHSLAQQSFIHRDLKPS 716
G L + + ++R + +D AR G+ Y H + +HRDLKP
Sbjct: 111 GEL-----------FDEIISRKRFS-EVDAARIIRQVLSGITYXH---KNKIVHRDLKPE 155
Query: 717 NILI---GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQM--T 771
N+L+ D ++ DFGL + K + GT Y+APE + C + T
Sbjct: 156 NLLLESKSKDANIRIIDFGLSTHFEASKKXKDK--IGTAYYIAPEVLHGTYDEKCDVWST 213
Query: 772 GLI 774
G+I
Sbjct: 214 GVI 216
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 23/167 (13%)
Query: 605 GTKIAVKR--MESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
G K+A+K+ ME+ G + EI +L ++H ++V L+ C R Y
Sbjct: 42 GQKVALKKVLMENEKEGFPITA--LREIKILQLLKHENVVNLIEIC-----RTKASPYNR 94
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIAL-DVAR-------GVEYLHSLAQQSFIHRDLK 714
+F++ +H L V L ++ R G+ Y+H + +HRD+K
Sbjct: 95 CKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMK 151
Query: 715 PSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAG---TFGYLAPE 758
+N+LI D K+ADFGL + K S R T Y PE
Sbjct: 152 AANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 198
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Query: 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLK 714
L+V E + G L + D G T ++ I + ++YLHS+ + HRD+K
Sbjct: 91 LIVMECLDGGELFSRI---QDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVK 144
Query: 715 PSNILIGD---DMRAKVADFGLVKNAPDGKY 742
P N+L + K+ DFG K KY
Sbjct: 145 PENLLYTSKRPNAILKLTDFGFAKETTGEKY 175
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 12/160 (7%)
Query: 603 PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
P G + V+R+ N+ ++ Q E+ V H ++V I +E +V +M
Sbjct: 34 PTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 93
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G+ + G L I V + ++Y+H + ++HR +K S+ILI
Sbjct: 94 YGSAKDLICTHFMDGMNELAI---AYILQGVLKALDYIHHMG---YVHRSVKASHILISV 147
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGK 762
D KV GL N + R+ F P+Y+ K
Sbjct: 148 D--GKVYLSGLRSNLSMISHGQRQRVVHDF----PKYSVK 181
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 14/87 (16%)
Query: 681 LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK-----VADFGLVK 735
T K + IA+ + +EY+H+ +S I+RD+KP N L+G + + DFGL K
Sbjct: 97 FTLKTVLMIAIQLITRMEYVHT---KSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAK 153
Query: 736 NA--PDGKYSVETR----LAGTFGYLA 756
P+ K + R L GT Y++
Sbjct: 154 EYIDPETKKHIPYREHKSLTGTARYMS 180
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 12/160 (7%)
Query: 603 PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMP 662
P G + V+R+ N+ ++ Q E+ V H ++V I +E +V +M
Sbjct: 50 PTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 109
Query: 663 RGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722
G+ + G L I V + ++Y+H + ++HR +K S+ILI
Sbjct: 110 YGSAKDLICTHFMDGMNELAI---AYILQGVLKALDYIHHMG---YVHRSVKASHILISV 163
Query: 723 DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGK 762
D KV GL N + R+ F P+Y+ K
Sbjct: 164 D--GKVYLSGLRSNLSMISHGQRQRVVHDF----PKYSVK 197
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 11/110 (10%)
Query: 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLK 714
L+V E + G L + D G T ++ I + ++YLHS+ + HRD+K
Sbjct: 89 LIVMECLDGGELFSRI---QDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVK 142
Query: 715 PSNILIGD---DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAG 761
P N+L + K+ DFG K ++ T T Y+APE G
Sbjct: 143 PENLLYTSKRPNAILKLTDFGFAKET--TSHNSLTEPCYTPYYVAPEVLG 190
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Query: 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKP 715
LV+E M G++ H+ H + + DVA +++LH+ + HRDLKP
Sbjct: 88 LVFEKMRGGSILSHI-----HKRRHFNELEASVVVQDVASALDFLHN---KGIAHRDLKP 139
Query: 716 SNILIGDDMR---AKVADFGL 733
NIL + K+ DFGL
Sbjct: 140 ENILCEHPNQVSPVKICDFGL 160
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 11/110 (10%)
Query: 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLK 714
L+V E + G L + D G T ++ I + ++YLHS+ + HRD+K
Sbjct: 135 LIVXECLDGGELFSRI---QDRGDQAFTEREASEIXKSIGEAIQYLHSI---NIAHRDVK 188
Query: 715 PSNILIGD---DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAG 761
P N+L + K+ DFG K ++ T T Y+APE G
Sbjct: 189 PENLLYTSKRPNAILKLTDFGFAKETTS--HNSLTTPCYTPYYVAPEVLG 236
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 98/235 (41%), Gaps = 27/235 (11%)
Query: 71 ISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAG-AIPSLANATSLQDIYLDNNNFTSVP 129
++L ++ + + L LE L N + + + SL + L +N T+VP
Sbjct: 40 LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVP 99
Query: 130 TGCFDGLTNLQVLSLSDNP--NLAPWPFPNELTKSTSLTTLYMDNANIFGLIPD-FFDSF 186
T F+ L+ L+ L L +NP ++ + F + SL L + I + F+
Sbjct: 100 TQAFEYLSKLRELWLRNNPIESIPSYAF----NRVPSLRRLDLGELKRLEYISEAAFEGL 155
Query: 187 SNLQNLRLSYNNFTGSLPASFAKSDIQNL--WMNDQQLGLSGT-LDVL-----SGMTQLR 238
NL+ L L N DI NL + ++L LSG LD++ G+T LR
Sbjct: 156 VNLRYLNLGMCNL----------KDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLR 205
Query: 239 QVWL-HKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNN 292
++WL H T +SL +L+L N L + L L + L +N
Sbjct: 206 KLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 260
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,186,420
Number of Sequences: 62578
Number of extensions: 845356
Number of successful extensions: 4113
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 264
Number of HSP's that attempted gapping in prelim test: 1964
Number of HSP's gapped (non-prelim): 1586
length of query: 782
length of database: 14,973,337
effective HSP length: 106
effective length of query: 676
effective length of database: 8,340,069
effective search space: 5637886644
effective search space used: 5637886644
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)