Query 003982
Match_columns 782
No_of_seqs 625 out of 5192
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 10:22:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003982.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003982hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4eco_A Uncharacterized protein 100.0 2.5E-47 8.7E-52 444.3 21.7 419 25-452 28-603 (636)
2 4ecn_A Leucine-rich repeat pro 100.0 6.1E-47 2.1E-51 448.2 24.2 416 23-449 265-840 (876)
3 3rgz_A Protein brassinosteroid 100.0 1.6E-45 5.5E-50 439.0 27.9 421 19-449 4-503 (768)
4 3rgz_A Protein brassinosteroid 100.0 1.4E-43 4.7E-48 422.4 21.6 392 66-461 294-751 (768)
5 4b9d_A Serine/threonine-protei 100.0 1.4E-42 4.9E-47 367.3 15.1 190 581-780 24-214 (350)
6 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.7E-42 9.3E-47 359.0 14.4 189 581-780 32-223 (311)
7 1ogq_A PGIP-2, polygalacturona 100.0 1.4E-41 4.8E-46 360.9 19.3 292 23-430 2-307 (313)
8 4fih_A Serine/threonine-protei 100.0 9.8E-42 3.4E-46 360.3 15.6 185 581-780 74-259 (346)
9 4asz_A BDNF/NT-3 growth factor 100.0 2.8E-41 9.6E-46 352.6 13.0 192 581-780 13-219 (299)
10 4fie_A Serine/threonine-protei 100.0 7.9E-41 2.7E-45 362.1 16.9 186 580-780 150-336 (423)
11 3j0a_A TOLL-like receptor 5; m 100.0 2.5E-39 8.4E-44 389.7 31.0 395 55-452 14-563 (844)
12 3omv_A RAF proto-oncogene seri 100.0 6.9E-41 2.4E-45 349.5 14.7 190 581-780 36-226 (307)
13 3hyh_A Carbon catabolite-derep 100.0 8.6E-41 3E-45 343.1 15.1 187 581-780 13-201 (275)
14 3fpq_A Serine/threonine-protei 100.0 1.8E-40 6.3E-45 343.8 17.4 182 584-780 29-218 (290)
15 4aoj_A High affinity nerve gro 100.0 1.2E-40 4E-45 352.8 15.6 192 581-780 41-249 (329)
16 3ubd_A Ribosomal protein S6 ki 100.0 1.5E-41 5E-46 353.7 8.3 188 581-780 24-215 (304)
17 4g3f_A NF-kappa-beta-inducing 100.0 2.4E-40 8.2E-45 348.7 14.3 182 581-780 58-245 (336)
18 4gt4_A Tyrosine-protein kinase 100.0 1.8E-40 6.1E-45 348.1 13.1 192 582-780 27-236 (308)
19 4g31_A Eukaryotic translation 100.0 3.6E-40 1.2E-44 344.9 15.3 192 580-780 4-219 (299)
20 3v47_A TOLL-like receptor 5B a 100.0 4E-39 1.4E-43 361.4 22.7 358 53-450 6-409 (455)
21 3vq2_A TLR4, TOLL-like recepto 100.0 2.1E-38 7.1E-43 368.8 27.7 385 66-452 32-561 (606)
22 3hmm_A TGF-beta receptor type- 100.0 5.1E-39 1.7E-43 337.9 17.1 191 580-780 2-207 (303)
23 2z81_A CD282 antigen, TOLL-lik 100.0 4.7E-38 1.6E-42 361.4 22.4 372 54-450 3-511 (549)
24 3t6q_A CD180 antigen; protein- 100.0 5.2E-37 1.8E-41 357.1 30.1 378 52-448 7-461 (606)
25 2id5_A Lingo-1, leucine rich r 100.0 1.5E-37 5.1E-42 350.6 24.2 339 49-453 3-360 (477)
26 4ase_A Vascular endothelial gr 100.0 2E-38 6.8E-43 338.4 13.7 200 574-780 57-276 (353)
27 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3.2E-36 1.1E-40 346.8 31.2 336 65-450 51-511 (562)
28 4b99_A Mitogen-activated prote 100.0 8.7E-38 3E-42 339.4 15.1 190 580-780 53-252 (398)
29 2z63_A TOLL-like receptor 4, v 100.0 4.2E-36 1.4E-40 346.8 28.5 368 66-451 28-533 (570)
30 3v47_A TOLL-like receptor 5B a 100.0 4.8E-36 1.6E-40 336.3 26.1 334 70-450 14-385 (455)
31 4g8a_A TOLL-like receptor 4; l 100.0 6.1E-36 2.1E-40 349.9 27.5 367 66-451 52-582 (635)
32 3t6q_A CD180 antigen; protein- 100.0 3.3E-36 1.1E-40 350.3 25.1 364 67-451 130-562 (606)
33 4f9c_A Cell division cycle 7-r 100.0 4.7E-37 1.6E-41 330.1 14.9 188 576-780 16-236 (361)
34 1ziw_A TOLL-like receptor 3; i 100.0 3.6E-35 1.2E-39 346.3 31.5 370 54-428 3-467 (680)
35 3v5w_A G-protein coupled recep 100.0 8E-37 2.7E-41 345.2 16.3 188 580-780 188-380 (689)
36 2id5_A Lingo-1, leucine rich r 100.0 5.1E-36 1.7E-40 338.1 22.8 325 55-451 3-335 (477)
37 2z7x_B TOLL-like receptor 1, v 100.0 1.4E-35 4.8E-40 338.4 26.1 358 66-450 21-482 (520)
38 4eco_A Uncharacterized protein 100.0 3.1E-36 1.1E-40 350.9 20.8 338 66-430 206-602 (636)
39 1ziw_A TOLL-like receptor 3; i 100.0 1E-34 3.4E-39 342.5 29.5 369 66-452 222-625 (680)
40 4ecn_A Leucine-rich repeat pro 100.0 2E-35 6.8E-40 349.8 23.0 339 66-432 448-844 (876)
41 3vq2_A TLR4, TOLL-like recepto 100.0 1.1E-34 3.8E-39 337.5 27.3 346 66-432 56-562 (606)
42 3uto_A Twitchin; kinase, muscl 100.0 1.3E-35 4.6E-40 338.3 18.1 187 580-780 156-345 (573)
43 3oja_B Anopheles plasmodium-re 100.0 4.5E-35 1.5E-39 339.1 22.4 327 67-452 52-383 (597)
44 3o6n_A APL1; leucine-rich repe 100.0 6E-35 2E-39 320.4 21.7 326 66-451 45-376 (390)
45 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2E-34 7E-39 331.7 27.1 313 66-432 76-514 (562)
46 2z7x_B TOLL-like receptor 1, v 100.0 2.6E-34 9E-39 327.8 24.0 316 66-432 45-485 (520)
47 2z63_A TOLL-like receptor 4, v 100.0 2.8E-34 9.5E-39 331.6 22.8 350 66-434 52-537 (570)
48 2z81_A CD282 antigen, TOLL-lik 100.0 2.2E-34 7.5E-39 330.8 19.5 340 66-432 50-514 (549)
49 3bz5_A Internalin-J, INLJ; leu 100.0 1.2E-32 3.9E-37 307.2 29.5 303 66-429 42-353 (457)
50 1o6v_A Internalin A; bacterial 100.0 1.3E-32 4.5E-37 309.0 26.8 340 67-450 47-389 (466)
51 4fcg_A Uncharacterized protein 100.0 7.5E-34 2.6E-38 303.2 15.3 276 24-428 24-314 (328)
52 4fmz_A Internalin; leucine ric 100.0 1.8E-32 6E-37 295.7 25.7 301 66-428 44-346 (347)
53 2ft3_A Biglycan; proteoglycan, 100.0 1.1E-32 3.9E-37 295.2 23.8 298 42-426 19-331 (332)
54 3o6n_A APL1; leucine-rich repe 100.0 7.6E-33 2.6E-37 303.6 22.3 310 87-451 42-354 (390)
55 3fe3_A MAP/microtubule affinit 100.0 1.5E-33 5E-38 300.8 16.0 189 580-780 14-203 (328)
56 1xku_A Decorin; proteoglycan, 100.0 3.3E-32 1.1E-36 291.4 25.2 291 50-426 26-330 (330)
57 3j0a_A TOLL-like receptor 5; m 100.0 5.9E-32 2E-36 325.4 29.1 314 69-429 7-376 (844)
58 3zgw_A Maternal embryonic leuc 100.0 2.2E-33 7.5E-38 301.1 14.6 191 579-780 8-199 (347)
59 3v8s_A RHO-associated protein 100.0 1.2E-33 4E-38 309.7 12.6 198 574-780 62-262 (410)
60 3fxz_A Serine/threonine-protei 100.0 8E-33 2.7E-37 291.4 18.5 186 580-780 19-205 (297)
61 4aw2_A Serine/threonine-protei 100.0 1.2E-33 4E-38 312.1 12.6 202 572-780 65-270 (437)
62 1jl5_A Outer protein YOPM; leu 100.0 1E-31 3.4E-36 299.3 28.1 305 66-429 91-410 (454)
63 1jl5_A Outer protein YOPM; leu 100.0 5.3E-32 1.8E-36 301.5 25.3 330 66-450 11-371 (454)
64 1ogq_A PGIP-2, polygalacturona 100.0 2.4E-33 8.2E-38 297.4 13.4 233 133-454 72-309 (313)
65 3oja_B Anopheles plasmodium-re 100.0 2E-32 6.8E-37 316.9 22.1 310 87-451 48-360 (597)
66 1o6v_A Internalin A; bacterial 100.0 5.6E-32 1.9E-36 303.8 24.7 326 66-434 68-394 (466)
67 3uim_A Brassinosteroid insensi 100.0 3.4E-33 1.2E-37 298.5 13.8 209 567-780 16-224 (326)
68 1o6l_A RAC-beta serine/threoni 100.0 5.9E-33 2E-37 296.9 15.2 189 580-780 4-194 (337)
69 3s95_A LIMK-1, LIM domain kina 100.0 1.7E-32 5.8E-37 290.9 18.5 189 580-780 9-211 (310)
70 4eqm_A Protein kinase; transfe 100.0 6.2E-33 2.1E-37 291.8 14.8 190 580-780 10-201 (294)
71 3txo_A PKC-L, NPKC-ETA, protei 100.0 5.6E-33 1.9E-37 299.1 14.7 189 580-780 22-213 (353)
72 2vd5_A DMPK protein; serine/th 100.0 3.2E-33 1.1E-37 306.5 12.9 202 572-780 52-259 (412)
73 2yab_A Death-associated protei 100.0 1.6E-32 5.6E-37 296.2 18.0 189 579-780 10-207 (361)
74 4fr4_A YANK1, serine/threonine 100.0 7.8E-33 2.7E-37 300.4 15.0 190 581-780 15-206 (384)
75 2z80_A TOLL-like receptor 2, v 100.0 2.5E-32 8.7E-37 295.2 18.8 284 51-433 26-319 (353)
76 4fmz_A Internalin; leucine ric 100.0 1.1E-31 3.9E-36 289.4 23.9 305 86-449 40-346 (347)
77 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.3E-32 4.5E-37 298.8 16.6 190 580-780 64-274 (365)
78 2bdw_A Hypothetical protein K1 100.0 1.5E-32 5E-37 297.4 16.7 190 578-780 26-219 (362)
79 3soa_A Calcium/calmodulin-depe 100.0 1.3E-32 4.5E-37 304.8 16.5 191 578-780 8-202 (444)
80 4dc2_A Protein kinase C IOTA t 100.0 1E-32 3.5E-37 300.5 14.9 189 580-780 51-242 (396)
81 3bz5_A Internalin-J, INLJ; leu 100.0 4.4E-31 1.5E-35 294.4 28.1 313 77-449 29-352 (457)
82 1fot_A TPK1 delta, CAMP-depend 100.0 1.5E-32 5E-37 291.7 15.1 186 580-780 5-192 (318)
83 3c0i_A Peripheral plasma membr 100.0 2.1E-32 7.2E-37 295.2 16.2 194 579-780 22-222 (351)
84 3qd2_B Eukaryotic translation 100.0 2.9E-32 1E-36 291.9 17.1 193 579-780 4-265 (332)
85 3a8x_A Protein kinase C IOTA t 100.0 2.5E-32 8.6E-37 293.4 16.5 188 581-780 9-199 (345)
86 3niz_A Rhodanese family protei 100.0 2.3E-32 7.9E-37 289.9 15.8 191 579-780 19-209 (311)
87 3o0g_A Cell division protein k 100.0 3.6E-32 1.2E-36 285.8 16.8 189 581-780 2-191 (292)
88 1tki_A Titin; serine kinase, m 100.0 4.9E-32 1.7E-36 288.4 17.9 187 579-780 3-192 (321)
89 1xjd_A Protein kinase C, theta 100.0 2E-32 6.7E-37 293.7 14.6 191 578-780 14-207 (345)
90 2c30_A Serine/threonine-protei 100.0 8E-32 2.7E-36 287.0 19.1 195 571-780 25-230 (321)
91 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.4E-32 8.1E-37 294.0 14.9 185 581-780 41-227 (350)
92 3p86_A Serine/threonine-protei 100.0 2.4E-32 8.1E-37 289.3 14.4 192 579-780 35-228 (309)
93 2qkw_B Protein kinase; three-h 100.0 8E-33 2.7E-37 295.0 10.7 198 574-780 32-230 (321)
94 2psq_A Fibroblast growth facto 100.0 4.2E-32 1.4E-36 294.9 16.5 194 580-780 80-294 (370)
95 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.4E-32 1.2E-36 290.7 14.8 188 580-780 8-197 (336)
96 2y0a_A Death-associated protei 100.0 7.8E-32 2.7E-36 287.7 17.5 189 579-780 9-206 (326)
97 3sxs_A Cytoplasmic tyrosine-pr 100.0 7E-32 2.4E-36 279.8 16.4 188 580-780 7-194 (268)
98 2i0e_A Protein kinase C-beta I 100.0 3.2E-32 1.1E-36 293.0 13.9 190 579-780 18-210 (353)
99 4g8a_A TOLL-like receptor 4; l 100.0 7.2E-31 2.5E-35 306.9 26.5 325 67-432 77-584 (635)
100 1ob3_A PFPK5, cell division co 100.0 2.6E-32 8.9E-37 286.3 12.7 189 581-780 2-190 (288)
101 3a62_A Ribosomal protein S6 ki 100.0 4.8E-32 1.6E-36 289.5 14.9 189 580-780 16-210 (327)
102 3soc_A Activin receptor type-2 100.0 9.4E-32 3.2E-36 286.7 16.9 188 580-780 23-227 (322)
103 4hcu_A Tyrosine-protein kinase 100.0 3.1E-32 1.1E-36 282.6 12.9 187 581-780 10-196 (269)
104 2zv2_A Calcium/calmodulin-depe 100.0 6.4E-32 2.2E-36 284.8 15.1 191 580-780 12-229 (298)
105 3tki_A Serine/threonine-protei 100.0 4.8E-32 1.6E-36 288.9 14.3 191 579-780 5-197 (323)
106 3p1a_A MYT1 kinase, membrane-a 100.0 1.7E-31 6E-36 283.2 18.1 188 579-780 55-244 (311)
107 3kul_A Ephrin type-A receptor 100.0 1.3E-31 4.5E-36 285.8 16.3 190 580-780 48-243 (325)
108 1kob_A Twitchin; kinase, intra 100.0 2.2E-31 7.4E-36 290.1 18.3 187 580-780 50-239 (387)
109 3rp9_A Mitogen-activated prote 100.0 5.5E-32 1.9E-36 303.2 13.8 190 580-780 52-273 (458)
110 2acx_A G protein-coupled recep 100.0 1.1E-31 3.9E-36 303.1 16.2 190 580-780 183-374 (576)
111 1xku_A Decorin; proteoglycan, 100.0 3.7E-30 1.3E-34 275.4 27.0 194 89-316 30-229 (330)
112 3oz6_A Mitogen-activated prote 100.0 1.4E-31 4.7E-36 293.2 16.2 192 577-780 5-220 (388)
113 2r5t_A Serine/threonine-protei 100.0 5.1E-32 1.8E-36 293.5 12.6 189 580-780 37-228 (373)
114 3gni_B Strad alpha; kinase fol 100.0 2.5E-31 8.6E-36 291.3 18.1 194 580-780 24-226 (389)
115 1x8b_A WEE1HU, WEE1-like prote 100.0 3.9E-31 1.3E-35 277.1 18.6 191 579-780 9-220 (289)
116 2pmi_A Negative RE, cyclin-dep 100.0 1.9E-31 6.6E-36 283.7 16.2 193 580-780 4-198 (317)
117 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.5E-31 5E-36 301.6 16.1 193 580-780 184-378 (543)
118 3gen_A Tyrosine-protein kinase 100.0 8.7E-32 3E-36 281.5 13.2 188 580-780 23-210 (283)
119 3q4u_A Activin receptor type-1 100.0 3.3E-31 1.1E-35 279.7 17.7 187 579-780 6-212 (301)
120 3n9x_A Phosphotransferase; mal 100.0 1.5E-31 5.2E-36 296.8 15.8 190 580-780 25-241 (432)
121 2ft3_A Biglycan; proteoglycan, 100.0 1.4E-30 4.9E-35 278.9 22.5 263 90-428 33-307 (332)
122 3kk8_A Calcium/calmodulin depe 100.0 3.8E-31 1.3E-35 276.7 17.3 189 579-780 4-196 (284)
123 2y94_A 5'-AMP-activated protei 100.0 1.7E-31 5.9E-36 297.8 15.1 188 581-780 16-205 (476)
124 2nru_A Interleukin-1 receptor- 100.0 1.3E-30 4.5E-35 276.0 21.0 202 569-780 13-223 (307)
125 3cbl_A C-FES, proto-oncogene t 100.0 1.4E-31 4.8E-36 291.7 13.9 190 580-780 113-304 (377)
126 3ork_A Serine/threonine protei 100.0 5.6E-32 1.9E-36 287.1 10.4 190 580-780 11-208 (311)
127 2qr7_A Ribosomal protein S6 ki 100.0 2.3E-31 7.9E-36 285.5 15.2 184 579-780 20-209 (342)
128 4agu_A Cyclin-dependent kinase 100.0 3.2E-31 1.1E-35 281.3 16.0 190 580-780 2-192 (311)
129 3g06_A SSPH2 (leucine-rich rep 100.0 8.1E-31 2.8E-35 300.7 20.3 278 51-433 18-302 (622)
130 3kn6_A Ribosomal protein S6 ki 100.0 4.3E-31 1.5E-35 281.8 16.6 183 581-780 8-198 (325)
131 3dls_A PAS domain-containing s 100.0 1.5E-31 5.1E-36 286.5 13.1 191 578-780 21-219 (335)
132 3uc3_A Serine/threonine-protei 100.0 2.2E-31 7.6E-36 288.2 14.5 186 580-780 19-207 (361)
133 2qol_A Ephrin receptor; recept 100.0 2E-31 6.9E-36 289.7 14.0 190 580-780 44-239 (373)
134 3llt_A Serine/threonine kinase 100.0 2.2E-31 7.4E-36 288.8 13.9 194 570-780 24-248 (360)
135 1vzo_A Ribosomal protein S6 ki 100.0 1.1E-31 3.6E-36 290.2 11.2 192 580-780 53-251 (355)
136 3ugc_A Tyrosine-protein kinase 100.0 1.5E-31 5.1E-36 281.5 12.1 189 580-780 9-206 (295)
137 4euu_A Serine/threonine-protei 100.0 5.4E-31 1.8E-35 280.6 16.3 193 580-780 8-212 (319)
138 3tt0_A Basic fibroblast growth 100.0 4.9E-31 1.7E-35 288.1 16.2 194 580-780 68-282 (382)
139 3lb7_A RAF proto-oncogene seri 100.0 5.2E-31 1.8E-35 278.9 15.9 191 580-780 35-226 (307)
140 2w4o_A Calcium/calmodulin-depe 100.0 2.6E-31 8.8E-36 286.4 13.8 185 579-780 51-239 (349)
141 3dbq_A Dual specificity protei 100.0 3.5E-31 1.2E-35 285.0 14.6 191 580-780 8-209 (343)
142 3f3z_A Calcium/calmodulin-depe 100.0 7.6E-31 2.6E-35 273.4 16.7 186 579-780 7-196 (277)
143 2izr_A Casein kinase I isoform 100.0 3.3E-31 1.1E-35 283.7 14.2 186 580-780 8-206 (330)
144 1opk_A P150, C-ABL, proto-onco 100.0 2.7E-31 9.4E-36 299.5 14.2 189 580-780 219-408 (495)
145 2x4f_A Myosin light chain kina 100.0 6.6E-31 2.3E-35 285.5 16.6 181 586-780 94-277 (373)
146 2a2a_A Death-associated protei 100.0 7.3E-31 2.5E-35 279.8 16.6 189 579-780 10-207 (321)
147 3qup_A Tyrosine-protein kinase 100.0 3.5E-31 1.2E-35 282.6 14.1 196 579-780 21-228 (323)
148 1luf_A Muscle-specific tyrosin 100.0 2.6E-31 9E-36 286.0 13.2 198 576-780 42-265 (343)
149 3is5_A Calcium-dependent prote 100.0 6.1E-31 2.1E-35 275.4 15.5 190 580-780 21-214 (285)
150 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.7E-31 5.8E-36 285.6 11.5 190 579-780 32-227 (329)
151 3mwu_A Calmodulin-domain prote 100.0 4.5E-31 1.6E-35 297.8 15.5 188 579-780 20-211 (486)
152 3zyj_A Leucine-rich repeat-con 100.0 5E-30 1.7E-34 285.7 23.5 248 70-431 47-295 (440)
153 3vhe_A Vascular endothelial gr 100.0 2E-31 6.8E-36 288.9 11.7 202 572-780 13-284 (359)
154 2eue_A Carbon catabolite derep 100.0 7.5E-31 2.6E-35 273.2 15.5 187 581-780 13-201 (275)
155 3ttj_A Mitogen-activated prote 100.0 2.2E-31 7.6E-36 297.4 12.3 185 580-780 61-252 (464)
156 2z66_A Variable lymphocyte rec 100.0 1.8E-30 6E-35 274.9 18.2 257 50-432 2-265 (306)
157 4e5w_A Tyrosine-protein kinase 100.0 1E-30 3.6E-35 276.0 16.4 189 581-780 21-218 (302)
158 2zmd_A Dual specificity protei 100.0 8.1E-31 2.8E-35 286.7 16.0 190 581-780 56-256 (390)
159 1qcf_A Haematopoetic cell kina 100.0 2.5E-31 8.6E-36 297.0 12.2 188 580-780 187-374 (454)
160 3i6u_A CDS1, serine/threonine- 100.0 7.2E-31 2.5E-35 289.9 15.6 192 578-780 132-333 (419)
161 4ejn_A RAC-alpha serine/threon 100.0 1.9E-31 6.5E-36 297.5 10.9 190 580-780 147-338 (446)
162 3l9p_A Anaplastic lymphoma kin 100.0 2.6E-31 8.8E-36 288.5 11.6 194 580-780 70-275 (367)
163 3lij_A Calcium/calmodulin depe 100.0 7.3E-31 2.5E-35 296.6 15.7 188 579-780 35-226 (494)
164 3t9t_A Tyrosine-protein kinase 100.0 3.8E-31 1.3E-35 274.0 12.3 187 581-780 8-194 (267)
165 1mp8_A Focal adhesion kinase 1 100.0 5.2E-31 1.8E-35 275.3 13.4 189 580-780 14-206 (281)
166 3zyi_A Leucine-rich repeat-con 100.0 1.1E-29 3.7E-34 284.1 24.6 248 71-432 59-307 (452)
167 3kmu_A ILK, integrin-linked ki 100.0 8.2E-31 2.8E-35 272.0 14.5 188 580-780 9-200 (271)
168 2ivs_A Proto-oncogene tyrosine 100.0 8E-31 2.7E-35 278.5 14.8 194 580-780 22-241 (314)
169 3hko_A Calcium/calmodulin-depe 100.0 3E-31 1E-35 285.8 11.6 201 576-780 21-265 (345)
170 2h34_A Serine/threonine-protei 100.0 8.9E-31 3E-35 277.5 14.7 191 579-780 32-224 (309)
171 1u5q_A Serine/threonine protei 100.0 9E-31 3.1E-35 281.8 14.8 188 580-780 53-242 (348)
172 3kfa_A Tyrosine-protein kinase 100.0 5.3E-31 1.8E-35 276.3 12.5 190 579-780 11-201 (288)
173 1qpc_A LCK kinase; alpha beta 100.0 1.2E-30 4E-35 272.3 15.1 188 580-780 12-199 (279)
174 2rku_A Serine/threonine-protei 100.0 2.6E-30 9E-35 271.9 17.6 189 580-780 14-204 (294)
175 4aaa_A Cyclin-dependent kinase 100.0 9.9E-31 3.4E-35 280.0 14.6 190 580-780 24-214 (331)
176 3gxj_A TGF-beta receptor type- 100.0 2.1E-31 7.2E-36 281.4 9.2 187 580-781 2-208 (303)
177 2owb_A Serine/threonine-protei 100.0 2E-30 7E-35 278.0 16.9 189 580-780 40-230 (335)
178 3mdy_A Bone morphogenetic prot 100.0 2.9E-30 1E-34 277.1 18.1 194 572-780 28-241 (337)
179 3q5i_A Protein kinase; CDPK, m 100.0 2.2E-30 7.4E-35 293.6 17.9 188 579-780 34-236 (504)
180 1cm8_A Phosphorylated MAP kina 100.0 6.2E-31 2.1E-35 285.3 12.7 185 580-780 24-215 (367)
181 3mi9_A Cell division protein k 100.0 1.2E-30 4.2E-35 281.8 15.0 191 580-780 16-218 (351)
182 3g33_A Cell division protein k 100.0 1.2E-30 4.2E-35 276.3 14.6 191 578-780 6-208 (308)
183 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 6E-31 2.1E-35 293.6 12.8 188 580-780 183-370 (452)
184 1b6c_B TGF-B superfamily recep 100.0 5.4E-30 1.8E-34 275.7 19.8 195 571-780 32-246 (342)
185 1nxk_A MAP kinase-activated pr 100.0 1.8E-30 6.2E-35 284.8 16.3 183 580-780 60-252 (400)
186 3cok_A Serine/threonine-protei 100.0 1.3E-30 4.6E-35 271.7 14.5 191 579-780 9-201 (278)
187 4eut_A Serine/threonine-protei 100.0 1.7E-30 5.7E-35 285.2 16.0 193 580-780 8-212 (396)
188 3bhy_A Death-associated protei 100.0 2.7E-30 9.1E-35 270.2 16.7 188 580-780 4-200 (283)
189 3fdn_A Serine/threonine-protei 100.0 9.5E-31 3.3E-35 273.0 13.2 187 580-780 8-196 (279)
190 3pfq_A PKC-B, PKC-beta, protei 100.0 1E-30 3.5E-35 304.7 14.8 190 579-780 339-531 (674)
191 2pvf_A Fibroblast growth facto 100.0 2.8E-30 9.6E-35 276.9 17.0 194 580-780 34-248 (334)
192 2y7j_A Phosphorylase B kinase 100.0 2.7E-30 9.1E-35 280.2 17.0 199 572-780 85-294 (365)
193 2ac3_A MAP kinase-interacting 100.0 1.9E-30 6.5E-35 275.9 15.3 191 580-780 11-215 (316)
194 4fvq_A Tyrosine-protein kinase 100.0 9.7E-31 3.3E-35 274.4 12.8 185 580-780 7-207 (289)
195 2yex_A Serine/threonine-protei 100.0 3.5E-30 1.2E-34 268.2 16.8 191 579-780 5-197 (276)
196 3lxl_A Tyrosine-protein kinase 100.0 2.9E-30 9.9E-35 275.9 16.6 188 581-780 23-219 (327)
197 3lm5_A Serine/threonine-protei 100.0 1.1E-30 3.8E-35 279.1 13.3 197 573-780 20-222 (327)
198 2vuw_A Serine/threonine-protei 100.0 1.1E-31 3.8E-36 288.0 5.3 181 580-780 19-265 (336)
199 1k9a_A Carboxyl-terminal SRC k 100.0 3E-30 1E-34 287.8 17.0 183 580-780 192-375 (450)
200 3lxp_A Non-receptor tyrosine-p 100.0 4.7E-30 1.6E-34 273.1 17.7 185 583-780 33-226 (318)
201 1t4h_A Serine/threonine-protei 100.0 4.6E-30 1.6E-34 269.4 17.4 185 581-780 26-218 (290)
202 1t46_A HOMO sapiens V-KIT hard 100.0 1.6E-30 5.5E-35 276.0 14.1 194 580-780 22-236 (313)
203 1rjb_A FL cytokine receptor; k 100.0 1.6E-30 5.6E-35 280.0 14.1 194 580-780 44-263 (344)
204 2w5a_A Serine/threonine-protei 100.0 1.4E-30 4.7E-35 271.7 13.1 193 580-780 5-205 (279)
205 3nyv_A Calmodulin-domain prote 100.0 1.3E-30 4.3E-35 294.3 13.7 188 579-780 24-216 (484)
206 3eb0_A Putative uncharacterize 100.0 1.3E-30 4.4E-35 284.9 13.1 189 577-780 3-231 (383)
207 2wqm_A Serine/threonine-protei 100.0 4.7E-30 1.6E-34 272.1 17.0 193 580-780 31-225 (310)
208 2a19_B Interferon-induced, dou 100.0 2.1E-30 7.3E-35 271.0 14.1 186 578-780 8-210 (284)
209 1csn_A Casein kinase-1; phosph 100.0 3.9E-30 1.3E-34 271.0 16.3 186 580-780 9-207 (298)
210 3fme_A Dual specificity mitoge 100.0 1.8E-30 6.2E-35 272.4 13.6 194 580-780 6-202 (290)
211 3og7_A AKAP9-BRAF fusion prote 100.0 1.6E-30 5.4E-35 272.8 13.0 191 580-780 23-214 (289)
212 2h6d_A 5'-AMP-activated protei 100.0 4E-30 1.4E-34 267.8 15.6 189 580-780 10-200 (276)
213 3poz_A Epidermal growth factor 100.0 1.3E-30 4.4E-35 278.5 12.1 189 580-780 14-208 (327)
214 2xrw_A Mitogen-activated prote 100.0 2.4E-30 8.1E-35 281.5 14.4 185 580-780 24-215 (371)
215 3a7i_A MST3 kinase, serine/thr 100.0 6.8E-30 2.3E-34 270.0 17.4 187 580-780 21-208 (303)
216 1ua2_A CAK, cell division prot 100.0 1.8E-30 6E-35 279.8 13.1 192 578-780 7-202 (346)
217 2buj_A Serine/threonine-protei 100.0 2.1E-30 7.2E-35 275.7 13.4 195 580-780 28-235 (317)
218 2jam_A Calcium/calmodulin-depe 100.0 3.4E-30 1.2E-34 272.4 14.9 186 579-780 7-196 (304)
219 3g2f_A Bone morphogenetic prot 100.0 3.5E-30 1.2E-34 276.4 15.2 186 580-780 12-224 (336)
220 4f0f_A Serine/threonine-protei 100.0 5.2E-30 1.8E-34 268.6 15.9 186 581-780 19-217 (287)
221 1zy4_A Serine/threonine-protei 100.0 2.9E-30 1E-34 272.5 14.0 190 579-780 4-220 (303)
222 3dtc_A Mitogen-activated prote 100.0 2.6E-30 8.9E-35 268.4 13.4 185 580-780 6-203 (271)
223 3mtl_A Cell division protein k 100.0 9.4E-31 3.2E-35 279.2 10.3 188 581-780 2-190 (324)
224 2vgo_A Serine/threonine-protei 100.0 3.1E-30 1E-34 269.9 14.0 187 580-780 13-201 (284)
225 2ycf_A Serine/threonine-protei 100.0 2.2E-30 7.6E-35 276.2 12.7 191 579-780 8-208 (322)
226 3cc6_A Protein tyrosine kinase 100.0 4.3E-30 1.5E-34 268.3 14.1 189 580-780 11-203 (281)
227 3brb_A Proto-oncogene tyrosine 100.0 3.8E-30 1.3E-34 273.2 13.9 197 578-780 31-238 (313)
228 1xbb_A Tyrosine-protein kinase 100.0 6.7E-30 2.3E-34 268.3 15.5 189 580-780 15-209 (291)
229 2h8h_A Proto-oncogene tyrosine 100.0 1.3E-30 4.6E-35 296.6 10.8 188 580-780 266-453 (535)
230 3eqc_A Dual specificity mitoge 100.0 3E-30 1E-34 279.8 13.0 187 580-780 32-219 (360)
231 1p4o_A Insulin-like growth fac 100.0 3.8E-30 1.3E-34 274.4 13.2 195 579-780 23-229 (322)
232 3nsz_A CK II alpha, casein kin 100.0 1E-29 3.5E-34 272.1 16.6 181 580-780 35-220 (330)
233 3byv_A Rhoptry kinase; malaria 100.0 9E-31 3.1E-35 285.5 8.5 192 580-780 72-302 (377)
234 3an0_A Dual specificity mitoge 100.0 3.5E-30 1.2E-34 276.9 13.0 194 579-780 49-246 (340)
235 2r3i_A Cell division protein k 100.0 4.6E-30 1.6E-34 270.6 13.6 190 581-780 3-193 (299)
236 3pg1_A Mitogen-activated prote 100.0 4E-30 1.4E-34 279.0 13.5 198 571-780 12-223 (362)
237 3kex_A Receptor tyrosine-prote 100.0 1.8E-30 6.2E-35 277.2 10.5 189 580-780 12-206 (325)
238 1u59_A Tyrosine-protein kinase 100.0 8.8E-30 3E-34 266.9 15.3 188 581-780 9-202 (287)
239 2fst_X Mitogen-activated prote 100.0 1.6E-30 5.4E-35 281.9 9.9 185 580-780 28-219 (367)
240 2xir_A Vascular endothelial gr 100.0 3.5E-30 1.2E-34 273.8 12.4 202 572-780 18-239 (316)
241 2w1i_A JAK2; chromosomal rearr 100.0 9.7E-30 3.3E-34 271.7 15.3 189 580-780 40-237 (326)
242 2eva_A TAK1 kinase - TAB1 chim 100.0 3.9E-30 1.3E-34 272.2 11.9 184 581-780 8-192 (307)
243 3qyz_A Mitogen-activated prote 100.0 8.6E-30 2.9E-34 276.4 14.8 188 580-780 26-221 (364)
244 1mqb_A Ephrin type-A receptor 100.0 9.5E-30 3.2E-34 272.5 14.9 190 580-780 43-239 (333)
245 3kvw_A DYRK2, dual specificity 100.0 1.5E-29 5.1E-34 280.1 16.9 184 580-780 96-288 (429)
246 3com_A Serine/threonine-protei 100.0 1.2E-29 4.2E-34 269.4 15.5 188 578-780 26-214 (314)
247 2clq_A Mitogen-activated prote 100.0 3.2E-29 1.1E-33 263.6 18.4 190 582-780 23-214 (295)
248 2i1m_A Macrophage colony-stimu 100.0 4.3E-30 1.5E-34 275.4 11.9 194 580-780 45-255 (333)
249 3f66_A Hepatocyte growth facto 100.0 7.7E-30 2.6E-34 268.8 13.4 190 580-780 24-221 (298)
250 1j1b_A Glycogen synthase kinas 100.0 4.7E-30 1.6E-34 283.6 12.2 185 581-780 54-246 (420)
251 1phk_A Phosphorylase kinase; g 100.0 1.4E-29 4.9E-34 266.8 15.4 193 578-780 14-218 (298)
252 1fvr_A Tyrosine-protein kinase 100.0 1.1E-29 3.9E-34 271.3 14.6 191 581-780 25-230 (327)
253 4e7w_A Glycogen synthase kinas 100.0 5.9E-30 2E-34 280.4 12.7 186 580-780 39-231 (394)
254 2wei_A Calmodulin-domain prote 100.0 1.2E-29 3.9E-34 266.0 14.3 191 576-780 17-211 (287)
255 3q60_A ROP5B; pseudokinase, tr 100.0 7.2E-30 2.5E-34 277.8 13.2 187 581-780 62-282 (371)
256 3op5_A Serine/threonine-protei 100.0 8.8E-30 3E-34 276.4 13.6 190 580-780 34-250 (364)
257 3c1x_A Hepatocyte growth facto 100.0 4.1E-30 1.4E-34 279.1 10.9 189 581-780 89-285 (373)
258 2j7t_A Serine/threonine-protei 100.0 6.6E-30 2.2E-34 269.9 11.9 192 579-780 17-211 (302)
259 4fl3_A Tyrosine-protein kinase 100.0 9.2E-30 3.1E-34 294.6 14.0 182 587-780 375-561 (635)
260 2vwi_A Serine/threonine-protei 100.0 3.4E-30 1.2E-34 272.1 9.1 196 579-780 13-216 (303)
261 2wtk_C Serine/threonine-protei 100.0 3E-29 1E-33 265.3 16.3 194 579-780 3-202 (305)
262 3ll6_A Cyclin G-associated kin 100.0 1.6E-29 5.3E-34 271.3 14.3 193 580-780 27-242 (337)
263 3lzb_A Epidermal growth factor 100.0 8.3E-30 2.9E-34 272.1 12.0 189 580-780 14-208 (327)
264 3pls_A Macrophage-stimulating 100.0 2E-29 6.7E-34 265.7 14.4 188 582-780 22-217 (298)
265 4exu_A Mitogen-activated prote 100.0 9E-30 3.1E-34 276.9 12.1 184 580-780 41-231 (371)
266 2b9h_A MAP kinase FUS3, mitoge 100.0 2.5E-29 8.7E-34 271.7 15.4 189 579-780 9-212 (353)
267 2v62_A Serine/threonine-protei 100.0 5.4E-30 1.8E-34 275.9 10.0 189 580-780 36-249 (345)
268 4hgt_A Casein kinase I isoform 100.0 2.5E-29 8.5E-34 264.5 14.6 188 578-780 6-204 (296)
269 3rgf_A Cyclin-dependent kinase 100.0 9.4E-30 3.2E-34 280.3 11.8 192 579-780 18-225 (405)
270 4fcg_A Uncharacterized protein 100.0 1.1E-28 3.8E-33 263.1 19.5 230 113-448 81-313 (328)
271 2yfx_A Tyrosine-protein kinase 100.0 1.7E-29 5.8E-34 270.0 13.2 194 580-780 29-234 (327)
272 1blx_A Cyclin-dependent kinase 100.0 1.9E-29 6.7E-34 269.4 13.5 190 579-780 9-208 (326)
273 2pml_X PFPK7, Ser/Thr protein 100.0 1.3E-29 4.4E-34 273.4 12.2 193 580-780 30-241 (348)
274 2x7f_A TRAF2 and NCK-interacti 100.0 2.8E-29 9.7E-34 268.1 14.6 193 578-780 21-223 (326)
275 1byg_A CSK, protein (C-termina 100.0 1.1E-29 3.8E-34 264.8 11.0 183 580-780 20-203 (278)
276 1z57_A Dual specificity protei 100.0 5.7E-29 1.9E-33 267.1 16.6 184 580-780 13-223 (339)
277 2ozo_A Tyrosine-protein kinase 100.0 1.6E-29 5.6E-34 291.8 13.2 187 582-780 336-528 (613)
278 3uzp_A CKI-delta, CKID, casein 100.0 4.8E-29 1.6E-33 262.4 15.4 187 579-780 7-204 (296)
279 1wak_A Serine/threonine-protei 100.0 2.7E-29 9.1E-34 276.1 13.9 184 580-780 36-282 (397)
280 3e3p_A Protein kinase, putativ 100.0 2.7E-29 9.4E-34 272.2 13.8 195 574-780 16-221 (360)
281 2jii_A Serine/threonine-protei 100.0 8.9E-30 3E-34 275.0 9.7 184 580-780 41-257 (352)
282 3cek_A Dual specificity protei 100.0 4.5E-29 1.5E-33 264.9 14.5 192 579-780 26-228 (313)
283 3a99_A Proto-oncogene serine/t 100.0 1.5E-29 5.1E-34 269.5 10.7 193 575-780 37-238 (320)
284 1u46_A ACK-1, activated CDC42 100.0 3E-29 1E-33 263.3 12.9 190 580-780 17-213 (291)
285 3aln_A Dual specificity mitoge 100.0 3.7E-29 1.3E-33 267.3 13.7 194 580-780 21-218 (327)
286 2iwi_A Serine/threonine-protei 100.0 1.6E-29 5.6E-34 268.2 10.2 192 576-780 26-228 (312)
287 2i6l_A Mitogen-activated prote 100.0 4.7E-29 1.6E-33 265.5 13.8 187 580-780 10-214 (320)
288 2pzi_A Probable serine/threoni 100.0 4.4E-29 1.5E-33 292.9 14.7 180 580-780 79-265 (681)
289 3coi_A Mitogen-activated prote 100.0 2.2E-29 7.4E-34 272.2 11.1 184 580-780 23-213 (353)
290 3fhr_A MAP kinase-activated pr 100.0 1.4E-28 4.9E-33 263.6 17.2 184 579-780 26-218 (336)
291 1ozn_A Reticulon 4 receptor; N 100.0 4E-28 1.4E-32 254.0 19.9 200 69-297 14-216 (285)
292 2j0j_A Focal adhesion kinase 1 100.0 5.2E-29 1.8E-33 289.4 14.3 190 579-780 388-581 (656)
293 3sv0_A Casein kinase I-like; t 100.0 1.7E-28 5.7E-33 274.2 17.6 187 579-780 5-202 (483)
294 2o6q_A Variable lymphocyte rec 100.0 9.6E-28 3.3E-32 248.8 21.7 217 52-297 2-220 (270)
295 2vx3_A Dual specificity tyrosi 100.0 1.5E-28 5.3E-33 268.3 16.1 187 579-780 52-247 (382)
296 2z80_A TOLL-like receptor 2, v 100.0 3.6E-28 1.2E-32 262.5 17.7 270 93-451 34-316 (353)
297 2z66_A Variable lymphocyte rec 100.0 7.5E-28 2.6E-32 254.6 19.3 247 93-451 10-263 (306)
298 2eu9_A Dual specificity protei 100.0 2.7E-28 9.1E-33 263.7 15.7 184 580-780 18-228 (355)
299 3p23_A Serine/threonine-protei 100.0 9.5E-29 3.2E-33 273.5 12.2 187 581-780 24-218 (432)
300 3zyj_A Leucine-rich repeat-con 100.0 3.1E-27 1.1E-31 263.1 24.0 246 92-452 45-295 (440)
301 1ozn_A Reticulon 4 receptor; N 100.0 8.1E-28 2.8E-32 251.6 18.0 222 49-296 2-239 (285)
302 3zyi_A Leucine-rich repeat-con 100.0 3E-27 1E-31 264.2 23.3 246 92-452 56-306 (452)
303 2rio_A Serine/threonine-protei 100.0 1.3E-28 4.4E-33 273.2 12.0 191 581-780 15-228 (434)
304 1wwl_A Monocyte differentiatio 100.0 4.5E-30 1.6E-34 272.3 -0.1 59 366-429 252-310 (312)
305 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.5E-29 8.5E-34 267.7 5.5 191 580-780 32-232 (319)
306 2dyl_A Dual specificity mitoge 100.0 2.6E-28 8.9E-33 259.6 13.1 191 580-780 24-218 (318)
307 1q8y_A SR protein kinase; tran 100.0 1.7E-28 5.9E-33 267.2 11.8 184 580-780 18-224 (373)
308 3g06_A SSPH2 (leucine-rich rep 99.9 2.5E-26 8.4E-31 263.6 29.3 257 90-450 40-298 (622)
309 4azs_A Methyltransferase WBDD; 99.9 1.9E-28 6.5E-33 279.3 11.0 176 589-780 242-427 (569)
310 3qa8_A MGC80376 protein; kinas 99.9 1.2E-28 3.9E-33 281.1 8.4 190 580-780 13-212 (676)
311 1z7x_W Ribonuclease inhibitor; 99.9 6.3E-31 2.1E-35 295.2 -11.5 326 67-430 29-413 (461)
312 3o53_A Protein LRIM1, AGAP0063 99.9 1.7E-29 5.8E-34 268.5 -0.0 262 93-432 13-280 (317)
313 1wwl_A Monocyte differentiatio 99.9 6E-29 2.1E-33 263.6 2.0 199 136-406 94-311 (312)
314 3o53_A Protein LRIM1, AGAP0063 99.9 4.9E-28 1.7E-32 257.2 6.9 267 67-412 11-284 (317)
315 3uqc_A Probable conserved tran 99.9 8.4E-27 2.9E-31 243.6 15.7 142 580-731 30-173 (286)
316 3oja_A Leucine-rich immune mol 99.9 1.5E-27 5.3E-32 268.1 8.4 171 88-296 32-205 (487)
317 3dzo_A Rhoptry kinase domain; 99.9 5.2E-27 1.8E-31 258.5 10.4 191 581-780 78-306 (413)
318 3oja_A Leucine-rich immune mol 99.9 3.5E-27 1.2E-31 265.3 8.6 222 110-432 31-255 (487)
319 2z62_A TOLL-like receptor 4, v 99.9 1.9E-25 6.5E-30 232.4 19.2 63 371-434 181-243 (276)
320 3m2w_A MAP kinase-activated pr 99.9 1.3E-25 4.6E-30 236.4 17.5 146 580-738 16-171 (299)
321 1z7x_W Ribonuclease inhibitor; 99.9 1E-29 3.4E-34 285.4 -15.3 348 66-449 3-411 (461)
322 2z62_A TOLL-like receptor 4, v 99.9 4.4E-25 1.5E-29 229.6 19.2 209 67-298 29-240 (276)
323 3en9_A Glycoprotease, O-sialog 99.9 5.1E-26 1.8E-30 257.9 7.4 175 584-778 339-525 (540)
324 3rfs_A Internalin B, repeat mo 99.9 1.2E-24 4.1E-29 225.7 16.2 228 90-416 19-247 (272)
325 3rfs_A Internalin B, repeat mo 99.9 7.1E-25 2.4E-29 227.4 14.5 219 115-433 21-240 (272)
326 2xwt_C Thyrotropin receptor; s 99.9 1.6E-24 5.5E-29 220.2 16.0 202 81-313 25-236 (239)
327 2o6q_A Variable lymphocyte rec 99.9 2.4E-23 8.1E-28 215.7 23.8 64 369-432 159-222 (270)
328 3m19_A Variable lymphocyte rec 99.9 8.5E-24 2.9E-28 216.5 19.0 190 53-297 3-194 (251)
329 1p9a_G Platelet glycoprotein I 99.9 1.2E-23 4E-28 220.0 19.9 200 63-295 7-208 (290)
330 1p9a_G Platelet glycoprotein I 99.9 1.2E-23 4.2E-28 219.8 19.9 204 109-429 6-209 (290)
331 4glp_A Monocyte differentiatio 99.9 1.4E-24 4.9E-29 229.7 9.4 203 137-429 91-308 (310)
332 3goz_A Leucine-rich repeat-con 99.9 2.3E-25 8E-30 241.2 -1.4 64 368-431 226-300 (362)
333 2ast_B S-phase kinase-associat 99.9 3.5E-25 1.2E-29 237.4 -1.2 211 52-292 34-257 (336)
334 4glp_A Monocyte differentiatio 99.9 1.6E-23 5.6E-28 221.5 11.3 225 67-317 65-308 (310)
335 3goz_A Leucine-rich repeat-con 99.9 2.9E-25 9.9E-30 240.5 -2.3 226 70-317 2-267 (362)
336 4ay9_X Follicle-stimulating ho 99.9 2.2E-22 7.6E-27 216.6 20.2 221 53-313 7-233 (350)
337 1h6u_A Internalin H; cell adhe 99.9 3.4E-23 1.1E-27 218.7 12.6 166 92-295 21-186 (308)
338 2xwt_C Thyrotropin receptor; s 99.9 7.6E-23 2.6E-27 207.8 14.7 213 95-426 16-237 (239)
339 3m19_A Variable lymphocyte rec 99.9 6.2E-22 2.1E-26 202.6 20.7 174 116-318 17-194 (251)
340 2o6s_A Variable lymphocyte rec 99.9 1.5E-22 5.2E-27 200.9 15.0 188 50-283 2-190 (208)
341 1h6u_A Internalin H; cell adhe 99.9 2.1E-22 7.3E-27 212.5 16.3 196 66-301 41-236 (308)
342 2ca6_A RAN GTPase-activating p 99.9 3E-25 1E-29 242.8 -7.3 205 160-432 91-320 (386)
343 1zar_A RIO2 kinase; serine kin 99.9 2.9E-22 1E-26 208.0 12.6 155 574-762 83-253 (282)
344 4ay9_X Follicle-stimulating ho 99.9 1.3E-21 4.3E-26 210.7 16.0 242 93-427 12-258 (350)
345 3cvr_A Invasion plasmid antige 99.9 6.9E-22 2.4E-26 223.9 14.4 192 56-300 49-248 (571)
346 2ca6_A RAN GTPase-activating p 99.9 1.3E-23 4.4E-28 229.7 -2.1 250 81-408 23-320 (386)
347 3cvr_A Invasion plasmid antige 99.9 5.1E-21 1.7E-25 216.8 18.7 45 369-414 209-253 (571)
348 2ast_B S-phase kinase-associat 99.9 4.7E-23 1.6E-27 220.8 0.1 251 91-434 48-312 (336)
349 3ogk_B Coronatine-insensitive 99.8 7.6E-24 2.6E-28 245.3 -6.9 350 67-430 139-528 (592)
350 2o6s_A Variable lymphocyte rec 99.8 1.1E-20 3.7E-25 187.5 15.9 104 93-200 10-113 (208)
351 3e6j_A Variable lymphocyte rec 99.8 3E-20 1E-24 187.0 15.9 152 50-204 14-176 (229)
352 1m9s_A Internalin B; cell inva 99.8 5.2E-20 1.8E-24 210.9 17.8 196 72-307 27-222 (605)
353 1h6t_A Internalin B; cell adhe 99.8 3.6E-20 1.2E-24 193.7 14.6 180 86-303 42-221 (291)
354 4b8c_D Glucose-repressible alc 99.8 3.7E-21 1.3E-25 226.0 7.1 235 25-313 130-369 (727)
355 3ogk_B Coronatine-insensitive 99.8 2.9E-22 1E-26 232.0 -2.8 342 66-426 164-549 (592)
356 2v9t_B SLIT homolog 2 protein 99.8 1.4E-19 4.6E-24 181.0 15.4 152 48-201 4-166 (220)
357 2v70_A SLIT-2, SLIT homolog 2 99.8 1.9E-19 6.5E-24 179.9 15.7 152 70-250 15-168 (220)
358 1h6t_A Internalin B; cell adhe 99.8 2.3E-20 7.8E-25 195.2 8.9 168 89-294 23-190 (291)
359 1m9s_A Internalin B; cell inva 99.8 4.2E-20 1.4E-24 211.6 11.5 194 88-319 19-213 (605)
360 2xot_A Amphoterin-induced prot 99.8 1.6E-19 5.4E-24 195.1 12.6 177 70-295 22-202 (361)
361 2v70_A SLIT-2, SLIT homolog 2 99.8 4.1E-19 1.4E-23 177.5 14.2 155 190-432 14-170 (220)
362 2p1m_B Transport inhibitor res 99.8 3.2E-22 1.1E-26 231.8 -10.2 326 66-430 105-496 (594)
363 1zth_A RIO1 serine protein kin 99.8 1.7E-19 6E-24 184.9 9.9 139 583-738 49-220 (258)
364 2v9t_B SLIT homolog 2 protein 99.8 1.5E-18 5.1E-23 173.4 15.9 79 70-151 15-94 (220)
365 1xeu_A Internalin C; cellular 99.8 1.8E-19 6.2E-24 185.3 8.7 177 88-303 17-193 (263)
366 2xot_A Amphoterin-induced prot 99.8 6.3E-19 2.2E-23 190.4 12.8 156 47-205 10-180 (361)
367 3e6j_A Variable lymphocyte rec 99.8 3.4E-18 1.2E-22 172.0 17.1 151 92-271 21-172 (229)
368 2p1m_B Transport inhibitor res 99.8 2.3E-21 7.7E-26 224.6 -10.3 318 66-428 130-519 (594)
369 1dce_A Protein (RAB geranylger 99.7 8.4E-21 2.9E-25 216.2 -8.4 140 134-295 346-499 (567)
370 4ezg_A Putative uncharacterize 99.7 1.8E-18 6.3E-23 169.7 9.4 153 110-295 41-194 (197)
371 4ezg_A Putative uncharacterize 99.7 2.4E-18 8.2E-23 168.8 10.1 154 87-272 41-195 (197)
372 1xeu_A Internalin C; cellular 99.7 3E-18 1E-22 176.1 10.7 167 68-273 21-187 (263)
373 1dce_A Protein (RAB geranylger 99.7 8.8E-21 3E-25 216.0 -10.1 193 87-310 346-567 (567)
374 1w8a_A SLIT protein; signaling 99.7 6.5E-18 2.2E-22 164.9 10.9 141 49-205 2-144 (192)
375 4b8c_D Glucose-repressible alc 99.7 6.2E-19 2.1E-23 207.1 1.1 116 155-297 216-331 (727)
376 2o6r_A Variable lymphocyte rec 99.7 8E-17 2.8E-21 155.0 14.4 139 50-204 2-141 (177)
377 1w8a_A SLIT protein; signaling 99.7 2.8E-17 9.5E-22 160.4 10.6 64 369-432 80-143 (192)
378 2wfh_A SLIT homolog 2 protein 99.7 2.7E-16 9.1E-21 153.4 13.9 128 70-202 14-141 (193)
379 4gyi_A RIO2 kinase; protein ki 99.7 6.9E-17 2.4E-21 171.6 10.1 141 583-739 97-267 (397)
380 2ell_A Acidic leucine-rich nuc 99.7 1.1E-16 3.9E-21 152.5 9.2 136 66-206 24-165 (168)
381 3sb4_A Hypothetical leucine ri 99.6 7E-17 2.4E-21 172.0 5.7 103 257-422 225-328 (329)
382 2ell_A Acidic leucine-rich nuc 99.6 8.4E-16 2.9E-20 146.5 10.5 83 113-200 24-108 (168)
383 2wfh_A SLIT homolog 2 protein 99.6 4.4E-15 1.5E-19 144.8 14.0 79 116-200 13-91 (193)
384 2je0_A Acidic leucine-rich nuc 99.6 5.6E-16 1.9E-20 144.5 6.6 128 66-195 17-148 (149)
385 2o6r_A Variable lymphocyte rec 99.6 1.1E-14 3.8E-19 139.9 15.1 134 91-252 8-141 (177)
386 3sb4_A Hypothetical leucine ri 99.6 5.9E-15 2E-19 157.1 13.3 102 234-398 225-328 (329)
387 2je0_A Acidic leucine-rich nuc 99.6 1.4E-15 4.7E-20 141.8 7.1 84 112-200 16-101 (149)
388 4fdw_A Leucine rich hypothetic 99.6 9.2E-14 3.2E-18 151.2 20.9 171 89-295 112-284 (401)
389 1a9n_A U2A', U2A'; complex (nu 99.5 5.6E-15 1.9E-19 141.9 7.6 128 66-200 19-153 (176)
390 1a9n_A U2A', U2A'; complex (nu 99.5 3.6E-15 1.2E-19 143.2 5.5 87 109-200 15-101 (176)
391 3g39_A Variable lymphocyte rec 99.5 1.2E-13 4.1E-18 131.6 13.3 103 70-201 13-116 (170)
392 4fdw_A Leucine rich hypothetic 99.5 6E-13 2E-17 144.8 19.9 260 68-427 115-382 (401)
393 3g39_A Variable lymphocyte rec 99.5 1.7E-13 5.8E-18 130.6 12.9 104 115-223 11-115 (170)
394 1ds9_A Outer arm dynein; leuci 99.5 4E-16 1.4E-20 153.1 -5.8 106 162-295 17-128 (198)
395 1ds9_A Outer arm dynein; leuci 99.5 2.8E-16 9.6E-21 154.2 -8.9 153 86-295 14-185 (198)
396 2r9u_A Variable lymphocyte rec 99.5 4.8E-13 1.7E-17 127.8 13.4 103 69-200 15-118 (174)
397 2r9u_A Variable lymphocyte rec 99.4 4.3E-13 1.5E-17 128.2 12.7 103 116-223 15-118 (174)
398 4fs7_A Uncharacterized protein 99.3 3.6E-11 1.2E-15 131.1 20.7 290 83-425 64-376 (394)
399 3tm0_A Aminoglycoside 3'-phosp 99.3 6.1E-12 2.1E-16 129.0 12.7 148 576-736 9-213 (263)
400 2ifg_A High affinity nerve gro 99.3 4.3E-12 1.5E-16 136.0 11.3 86 54-151 7-94 (347)
401 2ifg_A High affinity nerve gro 99.3 1.2E-11 4.1E-16 132.5 10.4 105 93-201 11-117 (347)
402 3un9_A NLR family member X1; l 99.2 3.5E-14 1.2E-18 153.0 -10.7 61 235-295 126-196 (372)
403 3un9_A NLR family member X1; l 99.2 1.9E-13 6.3E-18 147.3 -8.9 163 113-296 72-253 (372)
404 1nd4_A Aminoglycoside 3'-phosp 99.1 3.1E-11 1.1E-15 123.5 6.7 139 581-737 20-215 (264)
405 4fs7_A Uncharacterized protein 99.1 4.8E-09 1.6E-13 114.2 20.3 292 101-428 58-355 (394)
406 4gt6_A Cell surface protein; l 99.0 1.1E-08 3.7E-13 111.4 20.9 128 253-427 260-390 (394)
407 3dxp_A Putative acyl-COA dehyd 99.0 8.8E-10 3E-14 118.5 11.7 144 584-736 41-248 (359)
408 4gt6_A Cell surface protein; l 99.0 2.5E-08 8.7E-13 108.4 21.6 291 84-427 57-369 (394)
409 2ra8_A Uncharacterized protein 98.9 1.9E-10 6.5E-15 122.7 -0.8 158 134-314 169-341 (362)
410 2ra8_A Uncharacterized protein 98.8 2.8E-09 9.7E-14 113.6 6.0 141 231-428 168-320 (362)
411 3sg8_A APH(2'')-ID; antibiotic 98.8 1E-08 3.5E-13 107.3 8.6 137 586-737 25-224 (304)
412 3rw6_A Nuclear RNA export fact 98.8 4.3E-11 1.5E-15 121.1 -9.4 147 54-204 77-237 (267)
413 3r70_A Aminoglycoside phosphot 98.7 8.4E-08 2.9E-12 101.1 14.2 138 582-738 38-239 (320)
414 4h09_A Hypothetical leucine ri 98.7 6.5E-07 2.2E-11 96.7 21.5 293 67-425 47-343 (379)
415 3d1u_A Putative fructosamine-3 98.5 7.4E-07 2.5E-11 91.9 13.3 145 583-735 17-215 (288)
416 3tdw_A Gentamicin resistance p 98.5 1.1E-06 3.6E-11 91.9 14.7 137 586-737 24-225 (306)
417 4gkh_A Aminoglycoside 3'-phosp 98.5 1.1E-06 3.8E-11 90.0 14.0 137 587-737 30-224 (272)
418 3ovc_A Hygromycin-B 4-O-kinase 98.3 2.6E-06 8.8E-11 91.1 12.6 149 581-737 41-244 (362)
419 1io0_A Tropomodulin; LRR prote 98.3 4.1E-08 1.4E-12 94.4 -1.5 42 386-427 116-163 (185)
420 1io0_A Tropomodulin; LRR prote 98.3 3.6E-08 1.2E-12 94.8 -2.0 116 160-295 33-164 (185)
421 3rw6_A Nuclear RNA export fact 98.3 4.7E-08 1.6E-12 98.7 -1.5 104 86-193 137-257 (267)
422 4h09_A Hypothetical leucine ri 98.3 6.4E-05 2.2E-09 80.8 22.3 270 67-415 70-356 (379)
423 3ats_A Putative uncharacterize 98.2 2.9E-06 9.9E-11 90.7 8.4 82 586-667 25-121 (357)
424 2q83_A YTAA protein; 2635576, 98.1 2.8E-05 9.5E-10 82.4 13.6 144 587-737 38-253 (346)
425 2olc_A MTR kinase, methylthior 97.9 4.2E-05 1.4E-09 82.9 11.7 77 586-664 35-120 (397)
426 2ppq_A HSK, HK, homoserine kin 97.6 0.00032 1.1E-08 73.4 13.0 161 571-736 7-217 (322)
427 3jr1_A Putative fructosamine-3 97.6 0.00087 3E-08 69.5 15.9 141 585-732 40-232 (312)
428 2pyw_A Uncharacterized protein 97.6 0.00032 1.1E-08 76.5 12.5 76 585-663 38-122 (420)
429 3f7w_A Putative fructosamine-3 97.6 0.00053 1.8E-08 70.5 12.9 79 582-666 16-97 (288)
430 3csv_A Aminoglycoside phosphot 97.4 0.00043 1.5E-08 72.8 10.0 146 586-738 23-219 (333)
431 1zyl_A Hypothetical protein YI 97.4 0.0012 4.1E-08 69.1 13.3 144 587-736 32-223 (328)
432 3dxq_A Choline/ethanolamine ki 97.3 0.00043 1.5E-08 71.7 8.8 141 586-737 23-203 (301)
433 3rfe_A Platelet glycoprotein I 97.3 0.00033 1.1E-08 62.3 6.6 56 94-151 12-69 (130)
434 3e4g_A ATP synthase subunit S, 97.3 5.7E-05 2E-09 70.6 1.1 35 164-198 115-150 (176)
435 3feg_A Choline/ethanolamine ki 97.1 0.0013 4.5E-08 70.0 9.9 144 586-736 55-254 (379)
436 1pgv_A TMD-1, tropomodulin TMD 97.0 7.8E-05 2.7E-09 71.0 -0.6 113 163-295 41-170 (197)
437 3rfe_A Platelet glycoprotein I 97.0 0.00068 2.3E-08 60.3 5.5 57 370-428 11-68 (130)
438 1pgv_A TMD-1, tropomodulin TMD 97.0 0.00014 4.8E-09 69.3 0.7 37 390-426 125-168 (197)
439 3e4g_A ATP synthase subunit S, 96.7 0.00034 1.2E-08 65.3 1.2 84 164-271 62-153 (176)
440 1nw1_A Choline kinase (49.2 KD 96.7 0.0053 1.8E-07 66.8 10.6 72 586-665 78-158 (429)
441 3i1a_A Spectinomycin phosphotr 96.6 0.0081 2.8E-07 63.1 10.9 135 594-737 36-237 (339)
442 2qg7_A Ethanolamine kinase PV0 96.5 0.013 4.3E-07 64.2 11.4 73 586-665 113-187 (458)
443 3c5i_A Choline kinase; choline 96.5 0.0041 1.4E-07 66.3 7.4 73 586-665 38-120 (369)
444 3f2s_A CK, chetk-alpha, cholin 95.8 0.022 7.7E-07 60.8 9.0 147 586-736 57-280 (401)
445 3mes_A Choline kinase; malaria 95.6 0.028 9.4E-07 60.7 9.0 143 586-736 75-291 (424)
446 2ks1_B Epidermal growth factor 90.6 0.18 6.1E-06 34.4 2.8 27 487-513 13-39 (44)
447 2l2t_A Receptor tyrosine-prote 89.7 0.19 6.3E-06 34.2 2.3 27 487-513 12-38 (44)
448 3g15_A CK, chetk-alpha, cholin 88.9 1.3 4.4E-05 47.3 9.7 30 707-736 245-280 (401)
449 4ano_A ESSB; membrane protein, 84.8 2.5 8.4E-05 40.5 7.9 83 637-734 48-131 (219)
450 2jwa_A Receptor tyrosine-prote 84.1 0.56 1.9E-05 31.8 2.1 26 487-513 14-39 (44)
451 2yle_A Protein spire homolog 1 83.0 1.8 6.2E-05 41.3 6.0 93 664-780 33-125 (229)
452 3cxl_A N-chimerin; SH2, RHO-GA 82.3 0.16 5.3E-06 55.6 -1.8 63 585-650 146-215 (463)
453 4ann_A ESSB; membrane protein, 79.6 2.4 8.3E-05 40.4 5.6 85 637-735 43-127 (215)
454 2k1k_A Ephrin type-A receptor 78.4 0.93 3.2E-05 29.9 1.6 24 483-506 9-32 (38)
455 2lz0_A Uncharacterized protein 56.1 26 0.0009 28.6 6.5 36 108-144 15-50 (100)
456 3ls8_A Phosphatidylinositol 3- 54.8 1E+02 0.0034 34.3 12.6 46 683-735 454-501 (614)
457 2lz0_A Uncharacterized protein 53.5 18 0.00063 29.6 5.1 50 122-174 5-54 (100)
458 2x6h_A GH13170P, VPS34, phosph 47.4 80 0.0027 35.7 10.5 45 684-735 529-575 (696)
459 2knc_A Integrin alpha-IIB; tra 46.1 21 0.00073 25.4 3.6 26 483-508 11-36 (54)
460 2l8s_A Integrin alpha-1; trans 42.4 15 0.00052 26.1 2.3 25 484-508 9-33 (54)
461 2jwa_A Receptor tyrosine-prote 38.3 36 0.0012 23.0 3.6 8 509-516 32-39 (44)
462 2jp3_A FXYD domain-containing 37.2 26 0.0009 25.9 3.0 26 489-514 21-46 (67)
463 2knc_B Integrin beta-3; transm 34.1 19 0.00064 28.1 2.0 21 486-506 12-32 (79)
464 2ks1_B Epidermal growth factor 33.5 21 0.0007 24.3 1.8 14 500-513 29-42 (44)
465 2l6w_A Beta-type platelet-deri 39.2 9.1 0.00031 24.9 0.0 15 501-515 23-37 (39)
466 2jo1_A Phospholemman; FXYD1, N 31.0 54 0.0018 24.5 3.8 26 490-515 21-46 (72)
467 2k9j_B Integrin beta-3; transm 30.5 24 0.00083 23.8 1.8 23 487-509 12-34 (43)
468 2k1a_A Integrin alpha-IIB; sin 27.6 25 0.00085 23.6 1.4 23 484-506 10-32 (42)
469 2zxe_G FXYD10, phospholemman-l 20.9 28 0.00095 26.3 0.7 25 489-513 23-47 (74)
470 2l9u_A Receptor tyrosine-prote 20.8 1.1E+02 0.0039 19.1 3.3 11 496-506 19-29 (40)
471 1cja_A Protein (actin-fragmin 20.0 1.1E+02 0.0037 31.1 5.0 139 586-738 74-239 (342)
No 1
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.5e-47 Score=444.34 Aligned_cols=419 Identities=20% Similarity=0.246 Sum_probs=322.1
Q ss_pred cchhHHHHHHHHHhcCCCCCCC---------CCCCCCCCccc---cceEeCCCCCEEEEEeCCCCCCcccCccccCCccC
Q 003982 25 LGDDGSVMLKLAQSLQNLPSDW---------SSTSSTGYCEW---TGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQL 92 (782)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~~~~w---------~~~~~~~~c~w---~gv~c~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L 92 (782)
...|+.||.++++++.+....+ +|..+.++|.| +||+|+..++|+.|+|++++++|.+|++|++|++|
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~L 107 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTEL 107 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCTTC
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCccc
Confidence 3469999999999986643110 13346789999 99999988999999999999999999999999999
Q ss_pred ceeecccCc-----------------------------------------------------------------------
Q 003982 93 ETLSFQMNN----------------------------------------------------------------------- 101 (782)
Q Consensus 93 ~~L~L~~N~----------------------------------------------------------------------- 101 (782)
++|+|++|.
T Consensus 108 ~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~ 187 (636)
T 4eco_A 108 EVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQ 187 (636)
T ss_dssp CEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTT
T ss_pred eEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhhh
Confidence 999999984
Q ss_pred -------cCccCCCCCCCCCCCEEeCCCCcccC------------------CCCCCCC--CCCCCCEEeccCCCCCCCCC
Q 003982 102 -------IAGAIPSLANATSLQDIYLDNNNFTS------------------VPTGCFD--GLTNLQVLSLSDNPNLAPWP 154 (782)
Q Consensus 102 -------l~~~~~~l~~l~~L~~L~Ls~n~l~~------------------~~~~~~~--~l~~L~~L~Ls~N~l~~~~~ 154 (782)
++++++.|.++++|++|+|++|+|++ +|.. +. ++++|++|+|++|++.. .
T Consensus 188 l~~~~n~l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~-l~~~~l~~L~~L~L~~n~l~~--~ 264 (636)
T 4eco_A 188 IGQLSNNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTED-LKWDNLKDLTDVEVYNCPNLT--K 264 (636)
T ss_dssp TTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSC-CCGGGCTTCCEEEEECCTTCS--S
T ss_pred hccccCCCccCCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchh-hhhcccCCCCEEEecCCcCCc--c
Confidence 44533479999999999999999999 6655 67 99999999999999988 6
Q ss_pred CCcccCCCcccCeeeccccc-cCC-CCcccccCC------CCCcEEEcccCcCCCCCCc--cccc-cccchhhcccccCC
Q 003982 155 FPNELTKSTSLTTLYMDNAN-IFG-LIPDFFDSF------SNLQNLRLSYNNFTGSLPA--SFAK-SDIQNLWMNDQQLG 223 (782)
Q Consensus 155 ~p~~~~~l~~L~~L~L~~N~-l~~-~~~~~~~~l------~~L~~L~Ls~N~l~~~~p~--~~~~-~~l~~l~l~~~~~~ 223 (782)
+|..+.++++|++|+|++|+ +++ .+|..+..+ ++|++|+|++|+++ .+|. .+.. ..|+.|++++|.+.
T Consensus 265 ~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~ 343 (636)
T 4eco_A 265 LPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLE 343 (636)
T ss_dssp CCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCE
T ss_pred ChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCc
Confidence 88999999999999999998 888 778888776 88999999999998 8887 6665 57888888888765
Q ss_pred CccccccccCCCCCcEEEeecccccCCCCCCCCCCC-CCEEEcCCCcCccCcchhhcCCC--CCCEEEccCCcccCCCCC
Q 003982 224 LSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCES-LFDLSLRDNQLTGVVPASVISLP--ALLNISLQNNKLQGPYPL 300 (782)
Q Consensus 224 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~~~ 300 (782)
. ..+.+.++++|++|+|++|+++..+..+..+++ |++|++++|+++ .+|..+..++ +|++|++++|++++.+|.
T Consensus 344 g--~ip~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 420 (636)
T 4eco_A 344 G--KLPAFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGK 420 (636)
T ss_dssp E--ECCCCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTC
T ss_pred c--chhhhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchh
Confidence 2 222677778888888888888866556777777 888888888887 6777776654 788888888888776665
Q ss_pred CCC----------CccEEEccCCcCCCCCCCCCCC-CChhhh-----hHHHhhcCCCC-C-------cccccCcCCCCCC
Q 003982 301 FPS----------KVQKVSLDHNNFCKNSSDAGKP-CDPQVT-----TLLQIAGDMGY-P-------AILSDSWEGNNAC 356 (782)
Q Consensus 301 ~~~----------~l~~L~l~~N~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~-~-------~~~~~~~~~~~~~ 356 (782)
.+. +|+.|+|++|+++.++...... ...+.. .+..++..... . ..+......++.+
T Consensus 421 ~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l 500 (636)
T 4eco_A 421 NFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKL 500 (636)
T ss_dssp SSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCC
T ss_pred hhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcC
Confidence 433 6777777777777654221110 000000 00011111000 0 0233334455666
Q ss_pred CCCCcccc--cCCceeEEEccCcccccccCccccccccCCeEec------ccccccccCCccCCCCCCCCeEecCCCcCC
Q 003982 357 DGWPFVTC--SQGRIITINLANKLLAGNISPAYANLTSLKNLYL------QQNNLTGPIPDGLTKLASLQNLDVSNNNLS 428 (782)
Q Consensus 357 ~~~p~~~~--~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 428 (782)
..+|..+. .+++|+.|+|++|+|++ +|..+.++++|++|+| ++|++.+.+|..+..+++|+.|+|++|++
T Consensus 501 ~~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l- 578 (636)
T 4eco_A 501 TKLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI- 578 (636)
T ss_dssp CBCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-
T ss_pred CccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-
Confidence 68898887 88999999999999998 8889999999999999 56788889999999999999999999999
Q ss_pred CCCC-CCCCCcceecCCCCCCCCCC
Q 003982 429 GKVP-DFGSNVKFTVSPGNPFIGTN 452 (782)
Q Consensus 429 g~~p-~~~~~~~~~~~~~n~~~~~~ 452 (782)
+.+| .+...+....+++||+.|-.
T Consensus 579 ~~ip~~~~~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 579 RKVNEKITPNISVLDIKDNPNISID 603 (636)
T ss_dssp CBCCSCCCTTCCEEECCSCTTCEEE
T ss_pred CccCHhHhCcCCEEECcCCCCcccc
Confidence 5555 56788888899999987744
No 2
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=6.1e-47 Score=448.17 Aligned_cols=416 Identities=21% Similarity=0.283 Sum_probs=320.7
Q ss_pred cccchhHHHHHHHHHhcCCCCCCCCCCC---CCCC--ccc------------cceEeCCCCCEEEEEeCCCCCCcccCcc
Q 003982 23 TSLGDDGSVMLKLAQSLQNLPSDWSSTS---STGY--CEW------------TGINCDNSNRVTTISLAKSGLSGTLSPE 85 (782)
Q Consensus 23 ~~~~~~~~~l~~~~~~~~~~~~~w~~~~---~~~~--c~w------------~gv~c~~~~~v~~L~l~~~~l~~~~~~~ 85 (782)
+...+|+.||++||+++.+. +|.... ..++ |.| .||+|+..++|+.|+|++++|.|.+|++
T Consensus 265 ~~~~~d~~ALl~~k~~l~~~--~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip~~ 342 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALDGK--NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDA 342 (876)
T ss_dssp CHHHHHHHHHHHHHHHTTGG--GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEECGG
T ss_pred ccchHHHHHHHHHHHHcCCC--CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCchH
Confidence 34457999999999999654 786443 2344 999 9999998899999999999999999999
Q ss_pred ccCCccCceeec-ccCccCcc-----------------------------------------------------------
Q 003982 86 ISSLTQLETLSF-QMNNIAGA----------------------------------------------------------- 105 (782)
Q Consensus 86 l~~l~~L~~L~L-~~N~l~~~----------------------------------------------------------- 105 (782)
|++|++|++|+| ++|.++|.
T Consensus 343 l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~~ 422 (876)
T 4ecn_A 343 IGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSR 422 (876)
T ss_dssp GGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCCC
T ss_pred HhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccccc
Confidence 999999999999 77765443
Q ss_pred -----------------CC-CCCCCCCCCEEeCCCCcccC------------------CCCCC-CCCCCCCCEEeccCCC
Q 003982 106 -----------------IP-SLANATSLQDIYLDNNNFTS------------------VPTGC-FDGLTNLQVLSLSDNP 148 (782)
Q Consensus 106 -----------------~~-~l~~l~~L~~L~Ls~n~l~~------------------~~~~~-~~~l~~L~~L~Ls~N~ 148 (782)
+| .|.++++|++|+|++|+|++ +|... |.++++|++|+|++|+
T Consensus 423 l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~ 502 (876)
T 4ecn_A 423 ISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCP 502 (876)
T ss_dssp CCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCT
T ss_pred cchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCC
Confidence 44 78899999999999999999 77663 3499999999999999
Q ss_pred CCCCCCCCcccCCCcccCeeeccccc-cCC-CCcccccCCC-------CCcEEEcccCcCCCCCCc--cccc-cccchhh
Q 003982 149 NLAPWPFPNELTKSTSLTTLYMDNAN-IFG-LIPDFFDSFS-------NLQNLRLSYNNFTGSLPA--SFAK-SDIQNLW 216 (782)
Q Consensus 149 l~~~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~~~~~~~l~-------~L~~L~Ls~N~l~~~~p~--~~~~-~~l~~l~ 216 (782)
+.. .+|..+.++++|+.|+|++|+ +++ .+|..+..++ +|++|+|++|+++ .+|. .+.. ..|+.|+
T Consensus 503 l~~--~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~ 579 (876)
T 4ecn_A 503 NMT--QLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLD 579 (876)
T ss_dssp TCC--SCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEE
T ss_pred CCc--cChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEE
Confidence 888 688999999999999999998 888 7787666554 9999999999999 8998 7766 5799999
Q ss_pred cccccCCCccccccccCCCCCcEEEeecccccCCCCCCCCCCC-CCEEEcCCCcCccCcchhhcCCCC--CCEEEccCCc
Q 003982 217 MNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCES-LFDLSLRDNQLTGVVPASVISLPA--LLNISLQNNK 293 (782)
Q Consensus 217 l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~l~~N~ 293 (782)
+++|.+. ..+.+.++++|+.|+|++|+++..+..+..+++ |+.|+|++|+|+ .+|..+..++. |+.|++++|+
T Consensus 580 Ls~N~l~---~lp~~~~L~~L~~L~Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~ 655 (876)
T 4ecn_A 580 CVHNKVR---HLEAFGTNVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNK 655 (876)
T ss_dssp CTTSCCC---BCCCCCTTSEESEEECCSSCCSCCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSC
T ss_pred CCCCCcc---cchhhcCCCcceEEECcCCccccchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCc
Confidence 9999887 223789999999999999999966667999998 999999999999 78888887754 9999999999
Q ss_pred ccCCCCCCC--------CCccEEEccCCcCCCCCCCCCC-CCChhh-----hhHHHhhcCCCCC--------cccccCcC
Q 003982 294 LQGPYPLFP--------SKVQKVSLDHNNFCKNSSDAGK-PCDPQV-----TTLLQIAGDMGYP--------AILSDSWE 351 (782)
Q Consensus 294 l~~~~~~~~--------~~l~~L~l~~N~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~--------~~~~~~~~ 351 (782)
+++.+|..+ .+|+.|+|++|+++.++..... ...... -.+..++...... ..+.....
T Consensus 656 l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~L 735 (876)
T 4ecn_A 656 IGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDL 735 (876)
T ss_dssp TTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEEC
T ss_pred CCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEEC
Confidence 998776543 3688888888888765522110 000000 0000111111000 02333334
Q ss_pred CCCCCCCCCcccc--cCCceeEEEccCcccccccCccccccccCCeEeccc------ccccccCCccCCCCCCCCeEecC
Q 003982 352 GNNACDGWPFVTC--SQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQ------NNLTGPIPDGLTKLASLQNLDVS 423 (782)
Q Consensus 352 ~~~~~~~~p~~~~--~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~------N~l~g~~p~~~~~l~~L~~L~ls 423 (782)
.++.+..+|..+. .+++|+.|+|++|.|++ +|..+.++++|+.|+|++ |++.+.+|..|..+++|+.|+|+
T Consensus 736 s~N~L~~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls 814 (876)
T 4ecn_A 736 RFNKLTSLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIG 814 (876)
T ss_dssp CSSCCCCCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECC
T ss_pred CCCCCccchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECC
Confidence 4455567777776 77788888888888876 677777888888887765 67777788888888888888888
Q ss_pred CCcCCCCCC-CCCCCcceecCCCCCCC
Q 003982 424 NNNLSGKVP-DFGSNVKFTVSPGNPFI 449 (782)
Q Consensus 424 ~N~l~g~~p-~~~~~~~~~~~~~n~~~ 449 (782)
+|+| +.+| .+...+..+.+++||+.
T Consensus 815 ~N~L-~~Ip~~l~~~L~~LdLs~N~l~ 840 (876)
T 4ecn_A 815 SNDI-RKVDEKLTPQLYILDIADNPNI 840 (876)
T ss_dssp SSCC-CBCCSCCCSSSCEEECCSCTTC
T ss_pred CCCC-CccCHhhcCCCCEEECCCCCCC
Confidence 8888 5555 45667777777777764
No 3
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.6e-45 Score=439.02 Aligned_cols=421 Identities=24% Similarity=0.382 Sum_probs=272.3
Q ss_pred HhhccccchhHHHHHHHHHhcCCCC--CCCCCCCCCCCccccceEeCCCCCEEEEEeCCCCCCcc---cC----------
Q 003982 19 QLTTTSLGDDGSVMLKLAQSLQNLP--SDWSSTSSTGYCEWTGINCDNSNRVTTISLAKSGLSGT---LS---------- 83 (782)
Q Consensus 19 ~~~~~~~~~~~~~l~~~~~~~~~~~--~~w~~~~~~~~c~w~gv~c~~~~~v~~L~l~~~~l~~~---~~---------- 83 (782)
++++++.++|++||++||+++.+.. ++|. .+++||+|+||+|+ .++|+.|+|+++++.|. +|
T Consensus 4 ~~~~~~~~~~~~all~~k~~~~~~~~l~~W~--~~~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~ 80 (768)
T 3rgz_A 4 ASPSQSLYREIHQLISFKDVLPDKNLLPDWS--SNKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLE 80 (768)
T ss_dssp ----CCHHHHHHHHHHHHTTCSCTTSSTTCC--TTSCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCC
T ss_pred CccccCCHHHHHHHHHHHhhCCCcccccCCC--CCCCCcCCcceEEC-CCcEEEEECCCCCcCCccCccChhHhccCccc
Confidence 3445556789999999999997543 3554 56789999999999 78999999999999886 44
Q ss_pred -------------ccccCCccCceeecccCccCccCC---CCCCCCCCCEEeCCCCcccCCCCC-CCCCCCCCCEEeccC
Q 003982 84 -------------PEISSLTQLETLSFQMNNIAGAIP---SLANATSLQDIYLDNNNFTSVPTG-CFDGLTNLQVLSLSD 146 (782)
Q Consensus 84 -------------~~l~~l~~L~~L~L~~N~l~~~~~---~l~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~ 146 (782)
+.|+.+++|++|+|++|.+++.+| .+.++++|++|+|++|.+++..+. .+.++++|++|||++
T Consensus 81 ~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~ 160 (768)
T 3rgz_A 81 SLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSA 160 (768)
T ss_dssp EEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCS
T ss_pred ccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCC
Confidence 467788888899999998887554 577888888888888888754433 336666777777776
Q ss_pred CCCCCCCC-----------------------CCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCC
Q 003982 147 NPNLAPWP-----------------------FPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSL 203 (782)
Q Consensus 147 N~l~~~~~-----------------------~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 203 (782)
|++....+ -...+..+++|++|+|++|++++.+|. +..+++|++|+|++|++++.+
T Consensus 161 n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~ 239 (768)
T 3rgz_A 161 NSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDF 239 (768)
T ss_dssp SCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCH
T ss_pred CccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcc
Confidence 66543100 001125677788888888888887776 888888888888888888777
Q ss_pred Cccccc-cccchhhcccccCCCccccccccCCCCCcEEEeecccccCCCCC-CCC-CCCCCEEEcCCCcCccCcchhhcC
Q 003982 204 PASFAK-SDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPD-LSK-CESLFDLSLRDNQLTGVVPASVIS 280 (782)
Q Consensus 204 p~~~~~-~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~-l~~L~~L~L~~N~l~~~~p~~~~~ 280 (782)
|..+.. .+|+.|++++|.+... .+.. .+++|++|+|++|++++.+|. +.. +++|++|+|++|++++.+|..|++
T Consensus 240 ~~~l~~l~~L~~L~Ls~n~l~~~--~~~~-~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~ 316 (768)
T 3rgz_A 240 SRAISTCTELKLLNISSNQFVGP--IPPL-PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGS 316 (768)
T ss_dssp HHHTTTCSSCCEEECCSSCCEES--CCCC-CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGG
T ss_pred cHHHhcCCCCCEEECCCCcccCc--cCcc-ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhc
Confidence 777665 5677888877765422 2222 567777777777777765553 433 377777777777777777777777
Q ss_pred CCCCCEEEccCCcccCCCCC----CCCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHh-----------hcCCCC--C
Q 003982 281 LPALLNISLQNNKLQGPYPL----FPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQI-----------AGDMGY--P 343 (782)
Q Consensus 281 l~~L~~L~l~~N~l~~~~~~----~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~--~ 343 (782)
+++|++|++++|+++|.+|. .+.+|++|++++|++++..+........ .+..+ ...+.. .
T Consensus 317 l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~---~L~~L~Ls~N~l~~~~~~~~~~~~~ 393 (768)
T 3rgz_A 317 CSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSA---SLLTLDLSSNNFSGPILPNLCQNPK 393 (768)
T ss_dssp CTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTT---TCSEEECCSSEEEEECCTTTTCSTT
T ss_pred CCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhc---CCcEEEccCCCcCCCcChhhhhccc
Confidence 77777777777777766553 2456677777777665322110000000 00000 000000 1
Q ss_pred ccccc-CcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccccccCCccCCCCCCCCeEec
Q 003982 344 AILSD-SWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDV 422 (782)
Q Consensus 344 ~~~~~-~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 422 (782)
..+.. ...+|...+.+|..++.+++|++|+|++|.+++.+|..|+++++|++|+|++|++++.+|..+..+++|+.|+|
T Consensus 394 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 473 (768)
T 3rgz_A 394 NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLIL 473 (768)
T ss_dssp CCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEEC
T ss_pred CCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEe
Confidence 11111 22222233356666666677777777777777667777777777777777777777667777777777777777
Q ss_pred CCCcCCCCCCC-CC--CCcceecCCCCCCC
Q 003982 423 SNNNLSGKVPD-FG--SNVKFTVSPGNPFI 449 (782)
Q Consensus 423 s~N~l~g~~p~-~~--~~~~~~~~~~n~~~ 449 (782)
++|+++|.+|. +. ..+....+.+|.+.
T Consensus 474 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 503 (768)
T 3rgz_A 474 DFNDLTGEIPSGLSNCTNLNWISLSNNRLT 503 (768)
T ss_dssp CSSCCCSCCCGGGGGCTTCCEEECCSSCCC
T ss_pred cCCcccCcCCHHHhcCCCCCEEEccCCccC
Confidence 77777766663 22 45555566666554
No 4
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.4e-43 Score=422.43 Aligned_cols=392 Identities=27% Similarity=0.374 Sum_probs=324.8
Q ss_pred CCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-C-CCCCCCCCEEeCCCCcccCCCCCCCCCCC-CCCEE
Q 003982 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-S-LANATSLQDIYLDNNNFTSVPTGCFDGLT-NLQVL 142 (782)
Q Consensus 66 ~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~-l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L 142 (782)
.+++.|+|++|.+++.+|..|+.+++|++|+|++|.+++.+| . +.++++|++|+|++|++++..+..+.+++ +|++|
T Consensus 294 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L 373 (768)
T 3rgz_A 294 DTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTL 373 (768)
T ss_dssp TTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEE
T ss_pred CcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEE
Confidence 478999999999999999999999999999999999998777 4 99999999999999999965556677777 99999
Q ss_pred eccCCCCCCCCCCCcccCC--CcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccc-cccchhhccc
Q 003982 143 SLSDNPNLAPWPFPNELTK--STSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAK-SDIQNLWMND 219 (782)
Q Consensus 143 ~Ls~N~l~~~~~~p~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~l~l~~ 219 (782)
+|++|++.. .+|..+.. +++|+.|++++|++++.+|..+..+++|++|+|++|++++.+|..+.. ..|+.|++.+
T Consensus 374 ~Ls~N~l~~--~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 451 (768)
T 3rgz_A 374 DLSSNNFSG--PILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWL 451 (768)
T ss_dssp ECCSSEEEE--ECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred EccCCCcCC--CcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCC
Confidence 999999887 45666655 889999999999999999999999999999999999999999988876 6789999999
Q ss_pred ccCCCccccccccCCCCCcEEEeecccccCCCC-CCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCC
Q 003982 220 QQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIP-DLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPY 298 (782)
Q Consensus 220 ~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 298 (782)
|.+... ....+..+++|++|++++|++++.+| .+..+++|++|+|++|++++.+|.+++.+++|++|++++|+++|.+
T Consensus 452 n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 530 (768)
T 3rgz_A 452 NMLEGE-IPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNI 530 (768)
T ss_dssp SCCCSC-CCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEEC
T ss_pred CcccCc-CCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcC
Confidence 886532 23457789999999999999998777 4889999999999999999999999999999999999999999988
Q ss_pred CCC---CCCccEEEccCCcCCCCCCCCC-CCCC-----------------------------------hhhhhHHHhh--
Q 003982 299 PLF---PSKVQKVSLDHNNFCKNSSDAG-KPCD-----------------------------------PQVTTLLQIA-- 337 (782)
Q Consensus 299 ~~~---~~~l~~L~l~~N~~~~~~~~~~-~~~~-----------------------------------~~~~~~~~~~-- 337 (782)
|.. +.+|+.|++++|++++..+... .... .....+..+.
T Consensus 531 p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 610 (768)
T 3rgz_A 531 PAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTR 610 (768)
T ss_dssp CGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGT
T ss_pred CHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccc
Confidence 865 4578999999999985332111 0000 0000000000
Q ss_pred ---------------cCCCC-CcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccc
Q 003982 338 ---------------GDMGY-PAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQN 401 (782)
Q Consensus 338 ---------------~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 401 (782)
..+.. ......+...|+..+.+|..++.+++|+.|+|++|+++|.+|..|+++++|++|||++|
T Consensus 611 ~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N 690 (768)
T 3rgz_A 611 NPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSN 690 (768)
T ss_dssp CCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS
T ss_pred cccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCC
Confidence 01111 11222455566777899999999999999999999999999999999999999999999
Q ss_pred cccccCCccCCCCCCCCeEecCCCcCCCCCCCCC--CCcceecCCCCCCCCCCCCCCCCCCC
Q 003982 402 NLTGPIPDGLTKLASLQNLDVSNNNLSGKVPDFG--SNVKFTVSPGNPFIGTNVDTTPGGAG 461 (782)
Q Consensus 402 ~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~ 461 (782)
+++|.+|..+..+++|+.|||++|+|+|.||+.+ ..+....+.|||.+|+.+.. +|...
T Consensus 691 ~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~ 751 (768)
T 3rgz_A 691 KLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDPS 751 (768)
T ss_dssp CCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCSC
T ss_pred cccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCCC
Confidence 9999999999999999999999999999999765 34555678999999998864 66544
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.4e-42 Score=367.26 Aligned_cols=190 Identities=22% Similarity=0.367 Sum_probs=163.2
Q ss_pred cCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEEE
Q 003982 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 659 (782)
++|++.+.||+|+||+||+|+. .+|+.||||++.+........+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 6899999999999999999954 579999999998876666678889999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecCC
Q 003982 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (782)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~~ 739 (782)
||+||+|.+++.... ...+++.+++.|+.||+.||+|||+ +|||||||||+|||+++++.+||+|||+|+....
T Consensus 104 y~~gg~L~~~i~~~~---~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 104 YCEGGDLFKRINAQK---GVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp CCTTCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred CCCCCcHHHHHHHcC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 999999999997532 3457999999999999999999999 8999999999999999999999999999987654
Q ss_pred CCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 740 GKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.. ......+||+.|||||++.+. +++.++||||+||+
T Consensus 178 ~~-~~~~~~~GT~~YmAPE~l~~~---~y~~~~DiwSlGvi 214 (350)
T 4b9d_A 178 TV-ELARACIGTPYYLSPEICENK---PYNNKSDIWALGCV 214 (350)
T ss_dssp HH-HHHHHHHSCCTTCCHHHHTTC---CCCHHHHHHHHHHH
T ss_pred Cc-ccccccCCCccccCHHHHCCC---CCCcHHHHHHHHHH
Confidence 22 122346799999999999875 56889999999997
No 6
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.7e-42 Score=359.03 Aligned_cols=189 Identities=24% Similarity=0.416 Sum_probs=167.0
Q ss_pred cCCCccceeecccceEEEEEE-eCCCcEEEEEEeccccC-ChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEE
Q 003982 581 DNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 658 (782)
++|++.+.||+|+||+||+|+ ..+++.||||++.+... .....+.+.+|++++++++||||+++++++++++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 579999999999999999995 46799999999976542 2335678999999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecC
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~ 738 (782)
|||+||+|.+++.+. +.+++.++..++.||+.||+|||+ +||+||||||+|||++.++.+||+|||+|+...
T Consensus 112 Ey~~gG~L~~~i~~~-----~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~ 183 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI-----GSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183 (311)
T ss_dssp CCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence 999999999999763 458999999999999999999999 899999999999999999999999999999875
Q ss_pred CCC-ceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 739 DGK-YSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 739 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
... .......+||+.|||||++.+. +++.++||||+||+
T Consensus 184 ~~~~~~~~~~~~GTp~YmAPEvl~~~---~y~~~~DiWSlGvi 223 (311)
T 4aw0_A 184 PESKQARANSFVGTAQYVSPELLTEK---SACKSSDLWALGCI 223 (311)
T ss_dssp TTTTCCCBCCCCSCGGGCCHHHHHHS---CBCHHHHHHHHHHH
T ss_pred CCCCcccccCcccCcccCCHHHHcCC---CCCcHHHHHHHHHH
Confidence 433 2233456899999999999875 46789999999996
No 7
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.4e-41 Score=360.86 Aligned_cols=292 Identities=25% Similarity=0.428 Sum_probs=213.8
Q ss_pred cccchhHHHHHHHHHhcCCCC--CCCCCCCCCCCcc--ccceEeCCC---CCEEEEEeCCCCCCc--ccCccccCCccCc
Q 003982 23 TSLGDDGSVMLKLAQSLQNLP--SDWSSTSSTGYCE--WTGINCDNS---NRVTTISLAKSGLSG--TLSPEISSLTQLE 93 (782)
Q Consensus 23 ~~~~~~~~~l~~~~~~~~~~~--~~w~~~~~~~~c~--w~gv~c~~~---~~v~~L~l~~~~l~~--~~~~~l~~l~~L~ 93 (782)
.|.++|++||++||+++.+.. ..|. .+.+||. |.||+|+.. ++|+.|+|+++++++ .+|+.|.++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~--~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWL--PTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCC--TTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCC--CCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCC
Confidence 577899999999999996543 3553 3567888 999999864 799999999999999 8999999999999
Q ss_pred eeeccc-CccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeecc
Q 003982 94 TLSFQM-NNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMD 171 (782)
Q Consensus 94 ~L~L~~-N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~ 171 (782)
+|+|++ |.+.+.+| .|.++++|++|+|++|++++..+..|.++ ++|++|+|+
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l--------------------------~~L~~L~Ls 133 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQI--------------------------KTLVTLDFS 133 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGC--------------------------TTCCEEECC
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCC--------------------------CCCCEEeCC
Confidence 999995 99988777 78888888888888888875444444444 445555555
Q ss_pred ccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCC-CCcEEEeecccccCC
Q 003982 172 NANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMT-QLRQVWLHKNQFTGP 250 (782)
Q Consensus 172 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~-~L~~L~L~~N~l~~~ 250 (782)
+|.+++.+|..|..+++|++|+|++|++++.+|..+. .++ +|++|++++|++++.
T Consensus 134 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~------------------------~l~~~L~~L~L~~N~l~~~ 189 (313)
T 1ogq_A 134 YNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYG------------------------SFSKLFTSMTISRNRLTGK 189 (313)
T ss_dssp SSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGG------------------------CCCTTCCEEECCSSEEEEE
T ss_pred CCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHh------------------------hhhhcCcEEECcCCeeecc
Confidence 5555555556666666666666666666655555443 244 566666666666654
Q ss_pred CC-CCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCCCCCCccEEEccCCcCCCCCCCCCCCCChh
Q 003982 251 IP-DLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDPQ 329 (782)
Q Consensus 251 ~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~~~ 329 (782)
.| .+..++ |+.|+|++|++++.+|..|..+++|+.|++++|++++.+|.
T Consensus 190 ~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~----------------------------- 239 (313)
T 1ogq_A 190 IPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK----------------------------- 239 (313)
T ss_dssp CCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-----------------------------
T ss_pred CChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-----------------------------
Confidence 44 355555 88888888888888888888888888888888888754331
Q ss_pred hhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccccccCCc
Q 003982 330 VTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPD 409 (782)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 409 (782)
+..+++|++|+|++|.|++.+|..|.++++|++|+|++|+++|.+|.
T Consensus 240 ---------------------------------~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~ 286 (313)
T 1ogq_A 240 ---------------------------------VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286 (313)
T ss_dssp ---------------------------------CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC
T ss_pred ---------------------------------ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCC
Confidence 12235677777777777777788888888888888888888888877
Q ss_pred cCCCCCCCCeEecCCCc-CCCC
Q 003982 410 GLTKLASLQNLDVSNNN-LSGK 430 (782)
Q Consensus 410 ~~~~l~~L~~L~ls~N~-l~g~ 430 (782)
. ..+++|+.|++++|+ ++|.
T Consensus 287 ~-~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 287 G-GNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp S-TTGGGSCGGGTCSSSEEEST
T ss_pred C-ccccccChHHhcCCCCccCC
Confidence 5 777788888777776 5553
No 8
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=9.8e-42 Score=360.30 Aligned_cols=185 Identities=25% Similarity=0.410 Sum_probs=164.4
Q ss_pred cCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEEE
Q 003982 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 659 (782)
+.|++.+.||+|+||+||+|.. .+|+.||||+++.... ...+.+.+|+++|++++|||||++++++.+++..|+|||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmE 151 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 151 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 5699999999999999999954 5799999999976542 334668899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecCC
Q 003982 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (782)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~~ 739 (782)
||+||+|.+++.. ..+++.++..++.||+.||+|||+ +|||||||||+|||++.++.+||+|||+|+....
T Consensus 152 y~~gg~L~~~l~~------~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 152 FLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 222 (346)
T ss_dssp CCTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred CCCCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence 9999999998865 348999999999999999999999 8999999999999999999999999999998765
Q ss_pred CCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 740 GKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
... .....+||+.|||||++.+. +++.++||||+||+
T Consensus 223 ~~~-~~~~~~GTp~YmAPEvl~~~---~y~~~~DiWSlGvi 259 (346)
T 4fih_A 223 EVP-RRKSLVGTPYWMAPELISRL---PYGPEVDIWSLGIM 259 (346)
T ss_dssp SSC-CBCCCCSCGGGCCHHHHTTC---CBCTHHHHHHHHHH
T ss_pred CCC-cccccccCcCcCCHHHHCCC---CCCcHHHHHHHHHH
Confidence 432 23456899999999998875 56789999999997
No 9
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.8e-41 Score=352.62 Aligned_cols=192 Identities=31% Similarity=0.526 Sum_probs=163.5
Q ss_pred cCCCccceeecccceEEEEEEeC------CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeE
Q 003982 581 DNFSEANILGRGGFGVVYGGELP------DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER 654 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~ 654 (782)
++|.+.+.||+|+||+||+|++. +++.||||+++... ....++|.+|+++|++++|||||++++++.+++..
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 90 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 90 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC--hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence 56788999999999999999753 47789999997643 45678899999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHHhhc--------cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcE
Q 003982 655 LLVYEYMPRGTLAQHLFEWH--------DHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726 (782)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~--------~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~ 726 (782)
++|||||++|+|.++++... ......+++.++..|+.|+++||+|||+ ++||||||||+|||+++++++
T Consensus 91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~ 167 (299)
T 4asz_A 91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLV 167 (299)
T ss_dssp EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCE
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcE
Confidence 99999999999999997642 1223569999999999999999999999 899999999999999999999
Q ss_pred EEEeeccceecCCCCcee-eecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 727 KVADFGLVKNAPDGKYSV-ETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 727 kL~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
||+|||+|+......... .....||+.|||||++.+. .++.++|||||||+
T Consensus 168 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~---~~~~k~DVwS~Gvv 219 (299)
T 4asz_A 168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYR---KFTTESDVWSLGVV 219 (299)
T ss_dssp EECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred EECCcccceecCCCCceeecCceecChhhcCHHHHcCC---CCCchhhHHHHHHH
Confidence 999999998765543322 2335689999999998765 46889999999986
No 10
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=7.9e-41 Score=362.10 Aligned_cols=186 Identities=25% Similarity=0.408 Sum_probs=164.8
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 658 (782)
.+.|++.+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|+++|++++|||||++++++.+++..|+||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC--SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 35799999999999999999954 5799999999976542 33467899999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecC
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~ 738 (782)
|||+||+|.+++.. ..+++.++..++.||+.||+|||+ +|||||||||+|||++.++.+||+|||+|+...
T Consensus 228 Ey~~gG~L~~~i~~------~~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~ 298 (423)
T 4fie_A 228 EFLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 298 (423)
T ss_dssp ECCTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECC
T ss_pred eCCCCCcHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECC
Confidence 99999999999864 348999999999999999999999 899999999999999999999999999999876
Q ss_pred CCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 739 DGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.... .....+||+.|||||++.+. +++.++||||+||+
T Consensus 299 ~~~~-~~~~~~GTp~YmAPEvl~~~---~y~~~~DiWSlGvi 336 (423)
T 4fie_A 299 KEVP-RRKSLVGTPYWMAPELISRL---PYGPEVDIWSLGIM 336 (423)
T ss_dssp SSCC-CBCCCEECTTTCCHHHHTTC---CBCTHHHHHHHHHH
T ss_pred CCCc-cccccccCcCcCCHHHHCCC---CCCcHHHHHHHHHH
Confidence 5332 23456899999999998875 46789999999987
No 11
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-39 Score=389.71 Aligned_cols=395 Identities=19% Similarity=0.167 Sum_probs=280.7
Q ss_pred ccccceEeCCCCCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccC-C-CCCCCCCCCEEeCCCCcccCCCCCC
Q 003982 55 CEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAI-P-SLANATSLQDIYLDNNNFTSVPTGC 132 (782)
Q Consensus 55 c~w~gv~c~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~-~-~l~~l~~L~~L~Ls~n~l~~~~~~~ 132 (782)
|.|+.|.+ ...+++.|+|++|.+++..|..|.++++|++|+|++|.+.+.+ | .|.++++|++|+|++|+++.+++..
T Consensus 14 ~~L~~vP~-lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~ 92 (844)
T 3j0a_A 14 CNLTQVPQ-VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDA 92 (844)
T ss_dssp CCSSCCCS-SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTS
T ss_pred CCCCCCCC-CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhH
Confidence 56888887 6678999999999999888999999999999999999665544 5 7999999999999999999999999
Q ss_pred CCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCc-ccccCCCCCcEEEcccCcCCCCCCccccc--
Q 003982 133 FDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIP-DFFDSFSNLQNLRLSYNNFTGSLPASFAK-- 209 (782)
Q Consensus 133 ~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-- 209 (782)
|.++++|++|+|++|++....+....+.++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..|..+..
T Consensus 93 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~ 172 (844)
T 3j0a_A 93 FQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQ 172 (844)
T ss_dssp SCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHH
T ss_pred ccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccccc
Confidence 999999999999999998732223348999999999999999988765 67899999999999999998776665532
Q ss_pred -cc------------------------------cchhhcccccCCCc---------------------------------
Q 003982 210 -SD------------------------------IQNLWMNDQQLGLS--------------------------------- 225 (782)
Q Consensus 210 -~~------------------------------l~~l~l~~~~~~~~--------------------------------- 225 (782)
.. ++.|++++|.+...
T Consensus 173 ~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l 252 (844)
T 3j0a_A 173 GKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNI 252 (844)
T ss_dssp HCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSS
T ss_pred CCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccccccc
Confidence 11 45555555532110
Q ss_pred ----------------------------cccccccCCCCCcEEEeecccccCCCC-CCCCCCCCCEEEcCCCcCccCcch
Q 003982 226 ----------------------------GTLDVLSGMTQLRQVWLHKNQFTGPIP-DLSKCESLFDLSLRDNQLTGVVPA 276 (782)
Q Consensus 226 ----------------------------~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~ 276 (782)
.....+..+++|+.|+|++|++++.++ .|..+++|++|+|++|++++..|.
T Consensus 253 ~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 332 (844)
T 3j0a_A 253 KDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSS 332 (844)
T ss_dssp TTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSC
T ss_pred CCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHH
Confidence 001235556677777777777776555 467777777777777777766677
Q ss_pred hhcCCCCCCEEEccCCcccCCCCCC---CCCccEEEccCCcCCCCCCCCCC-------------CCCh-h----------
Q 003982 277 SVISLPALLNISLQNNKLQGPYPLF---PSKVQKVSLDHNNFCKNSSDAGK-------------PCDP-Q---------- 329 (782)
Q Consensus 277 ~~~~l~~L~~L~l~~N~l~~~~~~~---~~~l~~L~l~~N~~~~~~~~~~~-------------~~~~-~---------- 329 (782)
.|..+++|+.|++++|++++..+.. +.+|+.|+|++|.++++...... +... .
T Consensus 333 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~ 412 (844)
T 3j0a_A 333 NFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENR 412 (844)
T ss_dssp SCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCC
T ss_pred HhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCc
Confidence 7777777777777777776655543 34677777777776654320000 0000 0
Q ss_pred ---hhhHHHh---h--------cC-C---------CCCcccccCcCCCCCC------CCCCcccccCCceeEEEccCccc
Q 003982 330 ---VTTLLQI---A--------GD-M---------GYPAILSDSWEGNNAC------DGWPFVTCSQGRIITINLANKLL 379 (782)
Q Consensus 330 ---~~~~~~~---~--------~~-~---------~~~~~~~~~~~~~~~~------~~~p~~~~~~~~L~~L~Ls~N~l 379 (782)
......+ + .+ + .....+.....+++.+ +..|..+..+++|+.|+|++|+|
T Consensus 413 l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l 492 (844)
T 3j0a_A 413 LENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYL 492 (844)
T ss_dssp CCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHH
T ss_pred cccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcc
Confidence 0000000 0 00 0 0000111111111222 22334566778888999999999
Q ss_pred ccccCccccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcCCCCCCCCCCCcceecCCCCCCCCCC
Q 003982 380 AGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVPDFGSNVKFTVSPGNPFIGTN 452 (782)
Q Consensus 380 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~~~~n~~~~~~ 452 (782)
++..|..|.++++|+.|+|++|+|++..|..+. ++|+.|||++|+|++.+|.....+....+.+||+.|..
T Consensus 493 ~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c 563 (844)
T 3j0a_A 493 NSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICEC 563 (844)
T ss_dssp TTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSS
T ss_pred cccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEEEecCCCccccc
Confidence 888888888899999999999999877666665 78999999999999998876677888899999999953
No 12
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=6.9e-41 Score=349.54 Aligned_cols=190 Identities=27% Similarity=0.430 Sum_probs=158.3
Q ss_pred cCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEEEc
Q 003982 581 DNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 660 (782)
+++.+.+.||+|+||+||+|++. ..||||+++.........+.|.+|++++++++|||||++++++.+ +..++||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 56778999999999999999874 369999998766556677889999999999999999999998754 568999999
Q ss_pred cCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecCCC
Q 003982 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (782)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~~~ 740 (782)
|++|+|.++++.. ..++++.++..|+.|+++||+|||+ ++||||||||+|||+++++++||+|||+|+.....
T Consensus 113 ~~gGsL~~~l~~~----~~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 113 CEGSSLYKHLHVQ----ETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp CSSCBHHHHHHTS----CCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred CCCCCHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 9999999999652 2469999999999999999999999 89999999999999999999999999999876543
Q ss_pred Cc-eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 741 KY-SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 741 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.. ......+||+.|||||++.+...-.++.++||||||||
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvv 226 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIV 226 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHH
T ss_pred CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHH
Confidence 22 22344689999999999865422246889999999996
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8.6e-41 Score=343.12 Aligned_cols=187 Identities=27% Similarity=0.454 Sum_probs=149.5
Q ss_pred cCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCC-hhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEE
Q 003982 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 658 (782)
++|++.+.||+|+||+||+|.. .+|+.||||++.+.... ....+++.+|++++++++||||+++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 6899999999999999999954 57999999999865433 334678999999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecC
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~ 738 (782)
||+ +|+|.+++.+ .+.+++.++..++.|++.||+|||+ +||+||||||+|||+++++.+||+|||+|+...
T Consensus 93 Ey~-~g~L~~~l~~-----~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 163 (275)
T 3hyh_A 93 EYA-GNELFDYIVQ-----RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp ECC-CEEHHHHHHH-----SCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred eCC-CCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence 999 7899999876 3469999999999999999999999 899999999999999999999999999998765
Q ss_pred CCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 739 DGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
... .....+||+.|||||++.+.. .+..++||||+||+
T Consensus 164 ~~~--~~~~~~GT~~Y~APE~~~~~~--y~~~~~DiwSlGvi 201 (275)
T 3hyh_A 164 DGN--FLKTSCGSPNYAAPEVISGKL--YAGPEVDVWSCGVI 201 (275)
T ss_dssp -------------CTTSCHHHHSSSS--CCCTHHHHHHHHHH
T ss_pred CCC--ccCCeeECcccCChhhhcCCC--CCCChhhhHHHHHH
Confidence 433 223468999999999998751 13568999999986
No 14
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.8e-40 Score=343.79 Aligned_cols=182 Identities=24% Similarity=0.359 Sum_probs=158.2
Q ss_pred CccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEe----CCeEEEEE
Q 003982 584 SEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN----GSERLLVY 658 (782)
Q Consensus 584 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~----~~~~~lv~ 658 (782)
+..+.||+|+||+||+|.. .++..||+|++..........++|.+|++++++++|||||++++++.+ +...|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 5667899999999999954 578999999998776666677889999999999999999999999875 34579999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eEEcCCCCCCEEECC-CCcEEEEeeccce
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQS--FIHRDLKPSNILIGD-DMRAKVADFGLVK 735 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~--ivHrDikp~NIll~~-~~~~kL~DfG~a~ 735 (782)
|||++|+|.+++.+. ..+++.++..++.|++.||+|||+ +| ||||||||+|||++. ++.+||+|||+|+
T Consensus 109 Ey~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp ECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred eCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 999999999999763 458999999999999999999998 66 999999999999984 7899999999998
Q ss_pred ecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 736 NAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 736 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
...... ....+||+.|||||++.+. ++.++||||+||+
T Consensus 181 ~~~~~~---~~~~~GTp~YmAPE~~~~~----y~~~~DiwSlGvi 218 (290)
T 3fpq_A 181 LKRASF---AKAVIGTPEFMAPEMYEEK----YDESVDVYAFGMC 218 (290)
T ss_dssp GCCTTS---BEESCSSCCCCCGGGGGTC----CCTHHHHHHHHHH
T ss_pred eCCCCc---cCCcccCccccCHHHcCCC----CCcHHHHHHHHHH
Confidence 654322 2346899999999998764 5678999999986
No 15
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=352.81 Aligned_cols=192 Identities=31% Similarity=0.518 Sum_probs=157.8
Q ss_pred cCCCccceeecccceEEEEEEeC------CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeE
Q 003982 581 DNFSEANILGRGGFGVVYGGELP------DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER 654 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~ 654 (782)
++|.+.+.||+|+||+||+|++. +++.||||+++... ....++|.+|+++|++++|||||+++++|.+++..
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 118 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 118 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 46777899999999999999753 47889999997543 55678899999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHHhhccC----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCC
Q 003982 655 LLVYEYMPRGTLAQHLFEWHDH----------GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724 (782)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~----------~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~ 724 (782)
|+|||||++|+|.++++..... ...++++.++..|+.|+++||+|||+ ++||||||||+|||+++++
T Consensus 119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~ 195 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGL 195 (329)
T ss_dssp EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTT
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCC
Confidence 9999999999999999764321 13469999999999999999999999 8999999999999999999
Q ss_pred cEEEEeeccceecCCCCc-eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 725 RAKVADFGLVKNAPDGKY-SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 725 ~~kL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.+||+|||+|+....... ......+||+.|||||++.+. .++.++|||||||+
T Consensus 196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~---~~~~~sDvwS~Gvv 249 (329)
T 4aoj_A 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYR---KFTTESDVWSFGVV 249 (329)
T ss_dssp EEEECCCC----------------CCCCGGGCCHHHHTTC---CCCHHHHHHHHHHH
T ss_pred cEEEcccccceeccCCCcceecCcccccccccChhhhcCC---CCCccccccchHHH
Confidence 999999999987654332 233456799999999998875 46889999999986
No 16
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.5e-41 Score=353.72 Aligned_cols=188 Identities=26% Similarity=0.375 Sum_probs=157.1
Q ss_pred cCCCccceeecccceEEEEEEe----CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEE
Q 003982 581 DNFSEANILGRGGFGVVYGGEL----PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLL 656 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l 656 (782)
++|++.+.||+|+||+||+|+. .+++.||||++++.........++.+|++++++++||||+++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 5699999999999999999964 246789999998765444445578899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeecccee
Q 003982 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (782)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~ 736 (782)
|||||+||+|.+++.+. +.+++.++..++.|++.||+|||+ +||+||||||+|||++.++.+||+|||+|+.
T Consensus 104 vmEy~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EECCCTTCEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEcCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 99999999999999763 458999999999999999999999 8999999999999999999999999999987
Q ss_pred cCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 737 APDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 737 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
...... .....+||+.|||||++.+. +++.++||||+||+
T Consensus 176 ~~~~~~-~~~~~~GT~~YmAPE~~~~~---~y~~~~DiwSlGvi 215 (304)
T 3ubd_A 176 SIDHEK-KAYSFCGTVEYMAPEVVNRR---GHTQSADWWSFGVL 215 (304)
T ss_dssp -----C-CCCSCCCCGGGCCHHHHHTS---CCCTHHHHHHHHHH
T ss_pred ccCCCc-cccccccCcccCCHHHhccC---CCCCCCcccchHHH
Confidence 644332 22346899999999998775 46778999999986
No 17
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.4e-40 Score=348.70 Aligned_cols=182 Identities=24% Similarity=0.338 Sum_probs=156.7
Q ss_pred cCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEEE
Q 003982 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 659 (782)
+.|++.++||+|+||+||+|+. .+|+.||||+++.... ..+|++++++++|||||++++++.+++..|+|||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE 130 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 4678889999999999999954 5789999999976432 2469999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCC-cEEEEeeccceecC
Q 003982 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM-RAKVADFGLVKNAP 738 (782)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~-~~kL~DfG~a~~~~ 738 (782)
||+||+|.+++++. +.+++.++..++.|++.||+|||+ +|||||||||+|||++.++ .+||+|||+|+...
T Consensus 131 y~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~ 202 (336)
T 4g3f_A 131 LLEGGSLGQLIKQM-----GCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 202 (336)
T ss_dssp CCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-
T ss_pred ccCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEcc
Confidence 99999999999763 459999999999999999999998 8999999999999999987 69999999999875
Q ss_pred CCCce----eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 739 DGKYS----VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 739 ~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..... .....+||+.|||||++.+. +++.++||||+||+
T Consensus 203 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~---~y~~~~DiwSlGvi 245 (336)
T 4g3f_A 203 PDGLGKSLLTGDYIPGTETHMAPEVVMGK---PCDAKVDIWSSCCM 245 (336)
T ss_dssp -----------CCCCCCGGGCCHHHHTTC---CCCTHHHHHHHHHH
T ss_pred CCCcccceecCCccccCccccCHHHHCCC---CCCcHHHHHHHHHH
Confidence 43221 12335799999999999875 56789999999986
No 18
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.8e-40 Score=348.10 Aligned_cols=192 Identities=26% Similarity=0.432 Sum_probs=162.2
Q ss_pred CCCccceeecccceEEEEEEe------CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEE
Q 003982 582 NFSEANILGRGGFGVVYGGEL------PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL 655 (782)
Q Consensus 582 ~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~ 655 (782)
++++.+.||+|+||+||+|.+ .+++.||||+++... .....++|.+|++++++++|||||+++|++.+++..+
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 456788999999999999975 256789999997543 3445688999999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHHhhccCC-----------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCC
Q 003982 656 LVYEYMPRGTLAQHLFEWHDHG-----------YTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724 (782)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~ 724 (782)
+|||||++|+|.+++....... ...+++.++..|+.|+++||+|||+ ++||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEECCCC
Confidence 9999999999999997643211 2358999999999999999999999 8999999999999999999
Q ss_pred cEEEEeeccceecCCCCc-eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 725 RAKVADFGLVKNAPDGKY-SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 725 ~~kL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
++||+|||+|+....... ...+..+||+.|||||++.+. .++.++|||||||+
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~---~~s~ksDVwSfGvv 236 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYG---KFSIDSDIWSYGVV 236 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCC---CCCccchhhhHHHH
Confidence 999999999987644332 223446799999999998765 46889999999996
No 19
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.6e-40 Score=344.91 Aligned_cols=192 Identities=28% Similarity=0.388 Sum_probs=152.7
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCC------
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS------ 652 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~------ 652 (782)
.++|++.+.||+|+||+||+|+. .+|+.||||+++... .....+.+.+|+++|++++|||||++++++.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 82 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ 82 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence 45699999999999999999954 578999999997644 2445678999999999999999999999987644
Q ss_pred ------eEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcE
Q 003982 653 ------ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726 (782)
Q Consensus 653 ------~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~ 726 (782)
..|+|||||++|+|.+++..... ....++..++.++.|++.||+|||+ +||+||||||+|||++.++.+
T Consensus 83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~v 157 (299)
T 4g31_A 83 PSSPKVYLYIQMQLCRKENLKDWMNGRCT--IEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVV 157 (299)
T ss_dssp ----CEEEEEEEECCCSCCHHHHHHTCCS--GGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCE
T ss_pred ccCCCcEEEEEEecCCCCcHHHHHHhcCC--CChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcE
Confidence 36899999999999999975321 2235667789999999999999999 899999999999999999999
Q ss_pred EEEeeccceecCCCCce-----------eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 727 KVADFGLVKNAPDGKYS-----------VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 727 kL~DfG~a~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
||+|||+|+........ ..+..+||+.|||||++.+. .++.++||||+||+
T Consensus 158 Kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~---~y~~~~DiwSlGvi 219 (299)
T 4g31_A 158 KVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGN---SYSHKVDIFSLGLI 219 (299)
T ss_dssp EECCCCCC--------------------------CCCTTSCHHHHTTC---CCCTHHHHHHHHHH
T ss_pred EEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCC---CCCCHHHHHHHHHH
Confidence 99999999876543211 12335799999999998875 56789999999986
No 20
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=4e-39 Score=361.36 Aligned_cols=358 Identities=20% Similarity=0.228 Sum_probs=243.5
Q ss_pred CCccccc--eEeCCC---------CCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccC-C-CCCCCCCCCEEe
Q 003982 53 GYCEWTG--INCDNS---------NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAI-P-SLANATSLQDIY 119 (782)
Q Consensus 53 ~~c~w~g--v~c~~~---------~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~-~-~l~~l~~L~~L~ 119 (782)
..|.|.+ |.|++. .+++.|+|++|.+++..|..|..+++|++|+|++|.+.+.+ + .|.++++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 4455555 889763 47999999999999888999999999999999999998654 4 699999999999
Q ss_pred CCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCccc-ccCCCCCcEEEcccCc
Q 003982 120 LDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDF-FDSFSNLQNLRLSYNN 198 (782)
Q Consensus 120 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~Ls~N~ 198 (782)
|++|+++.+++..|.++++|++|+|++|++....+....+..+++|++|+|++|++++..|.. +..+++|++|++++|+
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 999999999999999999999999999999862222234899999999999999999998876 8999999999999999
Q ss_pred CCCCCCccccc---cccchhhcccccCCCcccc-------ccccCCCCCcEEEeecccccCCCCC-C---CCCCCCCEEE
Q 003982 199 FTGSLPASFAK---SDIQNLWMNDQQLGLSGTL-------DVLSGMTQLRQVWLHKNQFTGPIPD-L---SKCESLFDLS 264 (782)
Q Consensus 199 l~~~~p~~~~~---~~l~~l~l~~~~~~~~~~~-------~~~~~l~~L~~L~L~~N~l~~~~~~-~---~~l~~L~~L~ 264 (782)
+++..|..+.. ..++.++++.|.+...... ..+..+++|++|++++|++++..+. + ...++|+.|+
T Consensus 166 l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~ 245 (455)
T 3v47_A 166 VKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLI 245 (455)
T ss_dssp BSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEE
T ss_pred ccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEe
Confidence 99888887765 4677888888876543322 1234567889999999888764432 2 1224555555
Q ss_pred cCCCcCccC----------cchhhcC--CCCCCEEEccCCcccCCCCCCC---CCccEEEccCCcCCCCCCCCCCCCChh
Q 003982 265 LRDNQLTGV----------VPASVIS--LPALLNISLQNNKLQGPYPLFP---SKVQKVSLDHNNFCKNSSDAGKPCDPQ 329 (782)
Q Consensus 265 L~~N~l~~~----------~p~~~~~--l~~L~~L~l~~N~l~~~~~~~~---~~l~~L~l~~N~~~~~~~~~~~~~~~~ 329 (782)
+++|.+.+. .+..+.. .++|+.|++++|++++.+|..+ .+|+.|++++|+++++.
T Consensus 246 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~---------- 315 (455)
T 3v47_A 246 LSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKID---------- 315 (455)
T ss_dssp CTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEEC----------
T ss_pred eccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccC----------
Confidence 555533321 1111221 2455556666666555544432 34555666555554332
Q ss_pred hhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccccccCCc
Q 003982 330 VTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPD 409 (782)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 409 (782)
|..+..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..|.
T Consensus 316 ------------------------------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 365 (455)
T 3v47_A 316 ------------------------------DNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQ 365 (455)
T ss_dssp ------------------------------TTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTT
T ss_pred ------------------------------hhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChh
Confidence 22333445555555555555555555555555555555555555555555
Q ss_pred cCCCCCCCCeEecCCCcCCCCCCCC-C--CCcceecCCCCCCCC
Q 003982 410 GLTKLASLQNLDVSNNNLSGKVPDF-G--SNVKFTVSPGNPFIG 450 (782)
Q Consensus 410 ~~~~l~~L~~L~ls~N~l~g~~p~~-~--~~~~~~~~~~n~~~~ 450 (782)
.|..+++|+.|+|++|+|++.++.. . ..++...+.+||+.|
T Consensus 366 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 409 (455)
T 3v47_A 366 SFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 409 (455)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred hccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCccc
Confidence 5555555555555555555544432 1 344445555555554
No 21
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.1e-38 Score=368.84 Aligned_cols=385 Identities=18% Similarity=0.138 Sum_probs=274.5
Q ss_pred CCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEec
Q 003982 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSL 144 (782)
Q Consensus 66 ~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 144 (782)
.+++.|+|++|.+++..+..|.++++|++|+|++|++++++| .|.++++|++|+|++|+++.+++..|.++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 479999999999998888899999999999999999999887 7999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCcccCCCcccCeeeccccccCC-CCcccccCCCCCcEEEcccCcCCCCCCccccc--------------
Q 003982 145 SDNPNLAPWPFPNELTKSTSLTTLYMDNANIFG-LIPDFFDSFSNLQNLRLSYNNFTGSLPASFAK-------------- 209 (782)
Q Consensus 145 s~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-------------- 209 (782)
++|++.. ..+..+.++++|++|+|++|.+++ .+|..|+++++|++|++++|++++..|..+..
T Consensus 112 ~~n~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~ 189 (606)
T 3vq2_A 112 VETKLAS--LESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMS 189 (606)
T ss_dssp TTSCCCC--SSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECT
T ss_pred cCCcccc--ccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeecc
Confidence 9999988 345679999999999999999987 56999999999999999999998666654432
Q ss_pred --------------cccchhhcccccCCC---------------------------------------------------
Q 003982 210 --------------SDIQNLWMNDQQLGL--------------------------------------------------- 224 (782)
Q Consensus 210 --------------~~l~~l~l~~~~~~~--------------------------------------------------- 224 (782)
.+++.|++.+|.+..
T Consensus 190 ~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~ 269 (606)
T 3vq2_A 190 LNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLT 269 (606)
T ss_dssp TCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEEC
T ss_pred CCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheecc
Confidence 134444444443210
Q ss_pred -----cc----------------------ccccccCCCCCcEEEeecccccCCCC--------------------CCCCC
Q 003982 225 -----SG----------------------TLDVLSGMTQLRQVWLHKNQFTGPIP--------------------DLSKC 257 (782)
Q Consensus 225 -----~~----------------------~~~~~~~l~~L~~L~L~~N~l~~~~~--------------------~~~~l 257 (782)
.+ ..+.+..+++|++|++++|+++..+. .+..+
T Consensus 270 ~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l 349 (606)
T 3vq2_A 270 YTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVAL 349 (606)
T ss_dssp CCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCC
T ss_pred ccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccC
Confidence 00 00123334455555555555532210 24567
Q ss_pred CCCCEEEcCCCcCccC--cchhhcCCCCCCEEEccCCcccCCCCCC--CCCccEEEccCCcCCCCCC-CCCC-CCChhhh
Q 003982 258 ESLFDLSLRDNQLTGV--VPASVISLPALLNISLQNNKLQGPYPLF--PSKVQKVSLDHNNFCKNSS-DAGK-PCDPQVT 331 (782)
Q Consensus 258 ~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~l~~L~l~~N~~~~~~~-~~~~-~~~~~~~ 331 (782)
++|++|++++|++++. +|..+..+++|++|++++|.+++..+.+ +.+|+.|++++|++.+... .... ....+..
T Consensus 350 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 429 (606)
T 3vq2_A 350 PSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYL 429 (606)
T ss_dssp TTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEE
T ss_pred CCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEE
Confidence 7888888888888765 3777888888888888888877644322 3567777777777766543 1111 0000000
Q ss_pred hHHH------hhcCCCCCcccccCcCCCCCCC--CCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccc
Q 003982 332 TLLQ------IAGDMGYPAILSDSWEGNNACD--GWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNL 403 (782)
Q Consensus 332 ~~~~------~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 403 (782)
.+.. .+..+.....+......++.+. .+|..+..+++|++|+|++|.+++..|..|.++++|++|+|++|++
T Consensus 430 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 509 (606)
T 3vq2_A 430 DISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNL 509 (606)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred ECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcC
Confidence 0000 0001111112222222333332 2677788888888888888888888888888888888888888888
Q ss_pred cccCCccCCCCCCCCeEecCCCcCCCCCCCCC---CCcceecCCCCCCCCCC
Q 003982 404 TGPIPDGLTKLASLQNLDVSNNNLSGKVPDFG---SNVKFTVSPGNPFIGTN 452 (782)
Q Consensus 404 ~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~---~~~~~~~~~~n~~~~~~ 452 (782)
++.+|..|..+++|+.|||++|+|+..++.+. ..+....+.+||+.|..
T Consensus 510 ~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c 561 (606)
T 3vq2_A 510 LFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACIC 561 (606)
T ss_dssp SCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSS
T ss_pred CCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCC
Confidence 88888888888888888888888885555433 34677788888887743
No 22
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.1e-39 Score=337.94 Aligned_cols=191 Identities=26% Similarity=0.363 Sum_probs=154.3
Q ss_pred hcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCC----eEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS----ERL 655 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~----~~~ 655 (782)
.++|.+.+.||+|+||+||+|.+ +|+.||||++.... .....++.|+..+.+++||||+++++++.+++ ..|
T Consensus 2 ar~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~ 77 (303)
T 3hmm_A 2 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred CcEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEE
Confidence 35688899999999999999988 68999999996532 22223345666667889999999999998754 579
Q ss_pred EEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhc-----CCCCeEEcCCCCCCEEECCCCcEEEEe
Q 003982 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSL-----AQQSFIHRDLKPSNILIGDDMRAKVAD 730 (782)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-----~~~~ivHrDikp~NIll~~~~~~kL~D 730 (782)
+|||||++|+|.++++. .++++.++..++.|+++||+|||+. +..+||||||||+|||+++++++||+|
T Consensus 78 lV~Ey~~~gsL~~~l~~------~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~D 151 (303)
T 3hmm_A 78 LVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEEECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred EEecCCCCCcHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEe
Confidence 99999999999999975 3589999999999999999999972 124999999999999999999999999
Q ss_pred eccceecCCCCcee---eecccccccccCccccccch---hhhHHHHHHHHHhccc
Q 003982 731 FGLVKNAPDGKYSV---ETRLAGTFGYLAPEYAGKHW---MILCQMTGLIWLHGSV 780 (782)
Q Consensus 731 fG~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~---~~~~~~~~dvws~Gvv 780 (782)
||+|+......... ....+||+.|||||++.+.. ...++.++||||||||
T Consensus 152 FGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvv 207 (303)
T 3hmm_A 152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 207 (303)
T ss_dssp CTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHH
Confidence 99998765443221 23457999999999987642 2346889999999996
No 23
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=4.7e-38 Score=361.44 Aligned_cols=372 Identities=18% Similarity=0.230 Sum_probs=240.6
Q ss_pred CccccceEeCCC------------CCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeC
Q 003982 54 YCEWTGINCDNS------------NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYL 120 (782)
Q Consensus 54 ~c~w~gv~c~~~------------~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~L 120 (782)
.|.|.|+ |+.. .++++|+|++|++++..|.+|..+++|++|+|++|++++.+| .|.++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 4999998 8642 379999999999998889999999999999999999999887 7999999999999
Q ss_pred CCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeecccccc-CCCCcccccCCCCCcEEEcccCcC
Q 003982 121 DNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANI-FGLIPDFFDSFSNLQNLRLSYNNF 199 (782)
Q Consensus 121 s~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l-~~~~~~~~~~l~~L~~L~Ls~N~l 199 (782)
++|+++++++..|.++++|++|+|++|++... ..|..+.++++|++|++++|.+ ....+..|..+++|++|++++|++
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 160 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTL-GVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSL 160 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSS-CSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCccccc-chhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcc
Confidence 99999999999999999999999999999862 2467899999999999999984 445457899999999999999999
Q ss_pred CCCCCccccc-cccchhhcccccCCCccccccccCCCCCcEEEeecccccCCC---------------------------
Q 003982 200 TGSLPASFAK-SDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPI--------------------------- 251 (782)
Q Consensus 200 ~~~~p~~~~~-~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~--------------------------- 251 (782)
++..|..+.. ..++.|++..|.+..... ..+..+++|++|++++|++++..
T Consensus 161 ~~~~~~~l~~l~~L~~L~l~~n~~~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 239 (549)
T 2z81_A 161 RNYQSQSLKSIRDIHHLTLHLSESAFLLE-IFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDES 239 (549)
T ss_dssp CEECTTTTTTCSEEEEEEEECSBSTTHHH-HHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHH
T ss_pred cccChhhhhccccCceEecccCcccccch-hhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhH
Confidence 9888877654 334444444443221110 01122333333333333333210
Q ss_pred ----------------------------C----------CC--------------------------CCCCCCCEEEcCC
Q 003982 252 ----------------------------P----------DL--------------------------SKCESLFDLSLRD 267 (782)
Q Consensus 252 ----------------------------~----------~~--------------------------~~l~~L~~L~L~~ 267 (782)
. .+ ...++|+.|++++
T Consensus 240 ~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~ 319 (549)
T 2z81_A 240 FNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVEN 319 (549)
T ss_dssp HHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEES
T ss_pred HHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEecc
Confidence 0 00 0012344444444
Q ss_pred CcCccCcchhh-cCCCCCCEEEccCCcccCCCC------CCCCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCC
Q 003982 268 NQLTGVVPASV-ISLPALLNISLQNNKLQGPYP------LFPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDM 340 (782)
Q Consensus 268 N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~~------~~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (782)
|+++ .+|..+ ..+++|++|++++|++++.+| ..+.+|+.|++++|+++++... . . .+
T Consensus 320 n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~--------~----~---~~ 383 (549)
T 2z81_A 320 SKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKT--------G----E---IL 383 (549)
T ss_dssp SCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHH--------H----H---HG
T ss_pred Cccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccc--------h----h---hh
Confidence 4444 334333 345555555555555554321 1234455555555555432100 0 0 00
Q ss_pred CCCcccccCcCCCCCCCCCCcccccCC---------------------ceeEEEccCcccccccCccccccccCCeEecc
Q 003982 341 GYPAILSDSWEGNNACDGWPFVTCSQG---------------------RIITINLANKLLAGNISPAYANLTSLKNLYLQ 399 (782)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~p~~~~~~~---------------------~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 399 (782)
.....+.....+++.+..+|..+..++ +|++|+|++|+|++.+ .++++|++|+|+
T Consensus 384 ~~l~~L~~L~Ls~N~l~~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls 459 (549)
T 2z81_A 384 LTLKNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFS----LFLPRLQELYIS 459 (549)
T ss_dssp GGCTTCCEEECTTCCCCCCCSCCCCCTTCCEEECTTSCCSCCCTTSCTTCSEEECCSSCCSCCC----CCCTTCCEEECC
T ss_pred hcCCCCCEEECCCCCCccCChhhcccccccEEECCCCCcccccchhcCCceEEECCCCChhhhc----ccCChhcEEECC
Confidence 000111111112222333333333333 5556666666555432 467788888888
Q ss_pred cccccccCCccCCCCCCCCeEecCCCcCCCCCCC-CC--CCcceecCCCCCCCC
Q 003982 400 QNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVPD-FG--SNVKFTVSPGNPFIG 450 (782)
Q Consensus 400 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~-~~--~~~~~~~~~~n~~~~ 450 (782)
+|+|+ .+|. ...+++|+.|||++|+|++.+|. +. ..+....+.+||+.|
T Consensus 460 ~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 511 (549)
T 2z81_A 460 RNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 511 (549)
T ss_dssp SSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCC
T ss_pred CCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccC
Confidence 88887 6676 46688888888888888888775 22 566777888888865
No 24
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=5.2e-37 Score=357.07 Aligned_cols=378 Identities=16% Similarity=0.156 Sum_probs=230.3
Q ss_pred CCCcc--ccceEeCC----------CCCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEE
Q 003982 52 TGYCE--WTGINCDN----------SNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDI 118 (782)
Q Consensus 52 ~~~c~--w~gv~c~~----------~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L 118 (782)
.|.|. +..|.|.. ...++.|+|++|.+++..|..|..+++|++|+|++|++++..| .|.++++|++|
T Consensus 7 ~C~~~~~~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 86 (606)
T 3t6q_A 7 KCIEKEVNKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTL 86 (606)
T ss_dssp CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEE
T ss_pred ceecccCCceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCee
Confidence 34454 55688865 2479999999999998888899999999999999999999877 79999999999
Q ss_pred eCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCc
Q 003982 119 YLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNN 198 (782)
Q Consensus 119 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 198 (782)
+|++|+++.+++..|.++++|++|+|++|++.. ..+..+.++++|++|+|++|++++.....+..+++|++|++++|+
T Consensus 87 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~--l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 164 (606)
T 3t6q_A 87 VLTANPLIFMAETALSGPKALKHLFFIQTGISS--IDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNA 164 (606)
T ss_dssp ECTTCCCSEECTTTTSSCTTCCEEECTTSCCSC--GGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSC
T ss_pred eCCCCcccccChhhhcccccccEeeccccCccc--CCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCc
Confidence 999999999988889999999999999999888 335667888888888888888887554444457888888888888
Q ss_pred CCCCCCccccc-cccc--hhhcccccCCCccc------------------------------------------------
Q 003982 199 FTGSLPASFAK-SDIQ--NLWMNDQQLGLSGT------------------------------------------------ 227 (782)
Q Consensus 199 l~~~~p~~~~~-~~l~--~l~l~~~~~~~~~~------------------------------------------------ 227 (782)
+++..|..+.. ..++ .+++++|.+.....
T Consensus 165 l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~ 244 (606)
T 3t6q_A 165 IHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDIS 244 (606)
T ss_dssp CCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCC
T ss_pred ccccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccC
Confidence 77555554443 2344 45555554331110
Q ss_pred cccccCCC--CCcEEEeecccccCCCCC-CCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCCC---
Q 003982 228 LDVLSGMT--QLRQVWLHKNQFTGPIPD-LSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLF--- 301 (782)
Q Consensus 228 ~~~~~~l~--~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--- 301 (782)
...+.++. +|+.|++++|++++.++. |..+++|++|++++|+++ .+|..+..+++|++|++++|++++..|..
T Consensus 245 ~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~ 323 (606)
T 3t6q_A 245 PAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASN 323 (606)
T ss_dssp GGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGG
T ss_pred hhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhc
Confidence 00011111 455555555555554443 555555555555555555 44555555555555555555555443322
Q ss_pred CCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCC---CcccccCCceeEEEccCcc
Q 003982 302 PSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGW---PFVTCSQGRIITINLANKL 378 (782)
Q Consensus 302 ~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p~~~~~~~~L~~L~Ls~N~ 378 (782)
+.+|+.|++++|.+.+..+... +.....+......++.+..+ |..+..+++|++|++++|.
T Consensus 324 l~~L~~L~l~~n~~~~~~~~~~----------------~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~ 387 (606)
T 3t6q_A 324 FPSLTHLSIKGNTKRLELGTGC----------------LENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNE 387 (606)
T ss_dssp CTTCSEEECCSCSSCCBCCSST----------------TTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCS
T ss_pred cCcCCEEECCCCCcccccchhh----------------hhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCc
Confidence 2345555555555442110000 00000111111111111111 3445555566666666666
Q ss_pred cccccCccccccccCCeEecccccccccCCcc-CCCCCCCCeEecCCCcCCCCCCCC-C--CCcceecCCCCCC
Q 003982 379 LAGNISPAYANLTSLKNLYLQQNNLTGPIPDG-LTKLASLQNLDVSNNNLSGKVPDF-G--SNVKFTVSPGNPF 448 (782)
Q Consensus 379 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L~ls~N~l~g~~p~~-~--~~~~~~~~~~n~~ 448 (782)
+.+..|..|.++++|++|+|++|++.+..|.. +..+++|+.|++++|++++.+|.. . ..+....+.+|++
T Consensus 388 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 461 (606)
T 3t6q_A 388 PLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHF 461 (606)
T ss_dssp CEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBC
T ss_pred CCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCC
Confidence 66555556666666666666666665554433 555666666666666666555532 1 3444455555544
No 25
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=350.65 Aligned_cols=339 Identities=18% Similarity=0.190 Sum_probs=249.2
Q ss_pred CCCCCCc--cccceEeCCC----------CCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCC
Q 003982 49 TSSTGYC--EWTGINCDNS----------NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSL 115 (782)
Q Consensus 49 ~~~~~~c--~w~gv~c~~~----------~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L 115 (782)
++..|.| .|..|.|... .+++.|+|++|++++..+..|..+++|++|+|++|.+++..| .|.++++|
T Consensus 3 Cp~~C~C~~~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L 82 (477)
T 2id5_A 3 CPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNL 82 (477)
T ss_dssp CSTTCEEETTTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred ccCCCeECCCCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccC
Confidence 4555556 4678888752 367788888888887777778888888888888888887766 67888888
Q ss_pred CEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcc
Q 003982 116 QDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLS 195 (782)
Q Consensus 116 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 195 (782)
++|+|++|+++.++...|.++++|++|+|++|++.. ..+..|..+++|++|+|++|.+++..+..|..+++|++|+|+
T Consensus 83 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~--~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 160 (477)
T 2id5_A 83 RTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVI--LLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLE 160 (477)
T ss_dssp CEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCE--ECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEE
T ss_pred CEEECCCCcCCccCcccccCCCCCCEEECCCCcccc--CChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECC
Confidence 888888888888888778888888888888888777 456677788888888888888887777788888888888888
Q ss_pred cCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccccCCCC-CCCCCCCCCEEEcCCCcCccCc
Q 003982 196 YNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIP-DLSKCESLFDLSLRDNQLTGVV 274 (782)
Q Consensus 196 ~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~ 274 (782)
+|+++ .+|.. .+.++++|+.|+|++|++++.++ .|..+++|+.|++++|.+.+.+
T Consensus 161 ~n~l~-~~~~~-----------------------~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~ 216 (477)
T 2id5_A 161 KCNLT-SIPTE-----------------------ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTM 216 (477)
T ss_dssp SCCCS-SCCHH-----------------------HHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEE
T ss_pred CCcCc-ccChh-----------------------HhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCcccccc
Confidence 88887 33332 13457888888888888887665 4777888888888888777777
Q ss_pred chhhcCCCCCCEEEccCCcccCCCC---CCCCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcC
Q 003982 275 PASVISLPALLNISLQNNKLQGPYP---LFPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWE 351 (782)
Q Consensus 275 p~~~~~l~~L~~L~l~~N~l~~~~~---~~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (782)
|..+....+|+.|++++|++++..+ ..+.+|+.|+|++|.++++.
T Consensus 217 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-------------------------------- 264 (477)
T 2id5_A 217 TPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIE-------------------------------- 264 (477)
T ss_dssp CTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEEC--------------------------------
T ss_pred CcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccC--------------------------------
Confidence 7777666788888888888875443 23467888888888776544
Q ss_pred CCCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcCCCCC
Q 003982 352 GNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKV 431 (782)
Q Consensus 352 ~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~ 431 (782)
+..+..+++|+.|+|++|++++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|++++..
T Consensus 265 --------~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c 336 (477)
T 2id5_A 265 --------GSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDC 336 (477)
T ss_dssp --------TTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSG
T ss_pred --------hhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCcc
Confidence 223455677888888888888888888888888888888888888776777788888888888888887665
Q ss_pred CC--CCCCcceecCCCCCCCCCCC
Q 003982 432 PD--FGSNVKFTVSPGNPFIGTNV 453 (782)
Q Consensus 432 p~--~~~~~~~~~~~~n~~~~~~~ 453 (782)
+. +........+.++...|..+
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~C~~p 360 (477)
T 2id5_A 337 RLLWVFRRRWRLNFNRQQPTCATP 360 (477)
T ss_dssp GGHHHHTTTTSSCCTTCCCBEEES
T ss_pred chHhHHhhhhccccCccCceeCCc
Confidence 41 11222223345555555433
No 26
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2e-38 Score=338.41 Aligned_cols=200 Identities=25% Similarity=0.414 Sum_probs=167.1
Q ss_pred HHHHHHhcCCCccceeecccceEEEEEEeC------CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCC-CCcceEEe
Q 003982 574 EVLRQVTDNFSEANILGRGGFGVVYGGELP------DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRH-RHLVALLG 646 (782)
Q Consensus 574 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~nI~~~~~ 646 (782)
+..+.-.++|++.+.||+|+||+||+|.+. .++.||||+++... .....+.|.+|+++|++++| ||||++++
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-~~~~~~~~~~E~~il~~l~hhpnIV~l~g 135 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLG 135 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-ChHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence 334444678999999999999999999653 23579999997644 24456789999999999975 89999999
Q ss_pred EEEeC-CeEEEEEEccCCCCHHHHHHhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCC
Q 003982 647 YCING-SERLLVYEYMPRGTLAQHLFEWHDH-----------GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLK 714 (782)
Q Consensus 647 ~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik 714 (782)
+|.++ +..++|||||++|+|.++++..... ....+++.++..++.|+++||+|||+ ++|||||||
T Consensus 136 ~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDLK 212 (353)
T 4ase_A 136 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLA 212 (353)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCS
T ss_pred EEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCccC
Confidence 99765 5689999999999999999864321 12458999999999999999999999 899999999
Q ss_pred CCCEEECCCCcEEEEeeccceecCCCC-ceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 715 PSNILIGDDMRAKVADFGLVKNAPDGK-YSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 715 p~NIll~~~~~~kL~DfG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|+|||+++++.+||+|||+|+...... +......+||+.|||||++.+. .++.++|||||||+
T Consensus 213 ~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~---~y~~ksDVwS~Gv~ 276 (353)
T 4ase_A 213 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR---VYTIQSDVWSFGVL 276 (353)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred ccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcC---CCCCcccEeehHHH
Confidence 999999999999999999999775443 3334456799999999998875 56889999999996
No 27
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3.2e-36 Score=346.79 Aligned_cols=336 Identities=21% Similarity=0.229 Sum_probs=238.1
Q ss_pred CCCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEe
Q 003982 65 SNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLS 143 (782)
Q Consensus 65 ~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 143 (782)
..+++.|+|++|.+++..+.+|..+++|++|+|++|+|++.+| .|.++++|++|+|++|+|+.+|.. .+++|++|+
T Consensus 51 ~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~---~l~~L~~L~ 127 (562)
T 3a79_B 51 PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCC---PMASLRHLD 127 (562)
T ss_dssp CTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEECSC---CCTTCSEEE
T ss_pred CCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccCcc---ccccCCEEE
Confidence 3579999999999998888899999999999999999999877 799999999999999999998876 799999999
Q ss_pred ccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCC--cEEEcccCcC--CCCCCcccccc---------
Q 003982 144 LSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNL--QNLRLSYNNF--TGSLPASFAKS--------- 210 (782)
Q Consensus 144 Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L--~~L~Ls~N~l--~~~~p~~~~~~--------- 210 (782)
|++|++... +.|..|.++++|++|+|++|++++. .+..+++| ++|++++|++ ++..|..+...
T Consensus 128 Ls~N~l~~l-~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l 203 (562)
T 3a79_B 128 LSFNDFDVL-PVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVF 203 (562)
T ss_dssp CCSSCCSBC-CCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEE
T ss_pred CCCCCcccc-CchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEe
Confidence 999998872 3467899999999999999999874 34455555 9999999999 77777776542
Q ss_pred ------------------ccchhhcccccCC---Cccccccc---------------------------cCCCCCcEEEe
Q 003982 211 ------------------DIQNLWMNDQQLG---LSGTLDVL---------------------------SGMTQLRQVWL 242 (782)
Q Consensus 211 ------------------~l~~l~l~~~~~~---~~~~~~~~---------------------------~~l~~L~~L~L 242 (782)
.++.+++..|... ..+..+.+ ...++|++|++
T Consensus 204 ~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l 283 (562)
T 3a79_B 204 HPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNI 283 (562)
T ss_dssp CSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEE
T ss_pred cCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEE
Confidence 2233333332100 00000000 01236777777
Q ss_pred ecccccCCCCC-C-----------------------------------------------------CCCCCCCEEEcCCC
Q 003982 243 HKNQFTGPIPD-L-----------------------------------------------------SKCESLFDLSLRDN 268 (782)
Q Consensus 243 ~~N~l~~~~~~-~-----------------------------------------------------~~l~~L~~L~L~~N 268 (782)
++|++++.+|. + ..+++|++|++++|
T Consensus 284 ~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n 363 (562)
T 3a79_B 284 YNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQN 363 (562)
T ss_dssp EEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSS
T ss_pred eccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCC
Confidence 77777754442 3 33444444444444
Q ss_pred cCccCcchhhcCCCCCCEEEccCCcccCCC--C---CCCCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCC
Q 003982 269 QLTGVVPASVISLPALLNISLQNNKLQGPY--P---LFPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYP 343 (782)
Q Consensus 269 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~--~---~~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (782)
++++.+|..+.++++|++|++++|++++.. | ..+.+|+.|++++|++++
T Consensus 364 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~-------------------------- 417 (562)
T 3a79_B 364 VFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNS-------------------------- 417 (562)
T ss_dssp CCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBS--------------------------
T ss_pred ccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCC--------------------------
Confidence 444444444444444444444444444321 1 122344444444444433
Q ss_pred cccccCcCCCCCCCCCCcc-cccCCceeEEEccCcccccccCccccccccCCeEecccccccccCCccCCCCCCCCeEec
Q 003982 344 AILSDSWEGNNACDGWPFV-TCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDV 422 (782)
Q Consensus 344 ~~~~~~~~~~~~~~~~p~~-~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~l 422 (782)
.+|.. +..+++|++|+|++|++++.+|..+. ++|++|+|++|+|+ .+|..+..+++|+.|+|
T Consensus 418 --------------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L 480 (562)
T 3a79_B 418 --------------HAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNV 480 (562)
T ss_dssp --------------CCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEEC
T ss_pred --------------ccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEEC
Confidence 24433 55678999999999999988887765 79999999999999 78888889999999999
Q ss_pred CCCcCCCCCCC-CC--CCcceecCCCCCCCC
Q 003982 423 SNNNLSGKVPD-FG--SNVKFTVSPGNPFIG 450 (782)
Q Consensus 423 s~N~l~g~~p~-~~--~~~~~~~~~~n~~~~ 450 (782)
++|+|++.++. +. ..+....+.+|||.|
T Consensus 481 ~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c 511 (562)
T 3a79_B 481 ASNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 511 (562)
T ss_dssp CSSCCCCCCTTSTTTCTTCCCEECCSCCBCC
T ss_pred CCCCCCCCCHHHHhcCCCCCEEEecCCCcCC
Confidence 99999976655 43 566778899999976
No 28
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.7e-38 Score=339.43 Aligned_cols=190 Identities=25% Similarity=0.390 Sum_probs=160.5
Q ss_pred hcCCCccceeecccceEEEEEE-eCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEe------CC
Q 003982 580 TDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN------GS 652 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~------~~ 652 (782)
.++|++.+.||+|+||+||+|. ..+|+.||||+++.........+.+.+|+++|++++||||+++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 3679999999999999999995 4679999999998765555567789999999999999999999998764 35
Q ss_pred eEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeec
Q 003982 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG 732 (782)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG 732 (782)
..|+|||||+ |+|.+++.. .+++++.++..+++||+.||+|||+ +|||||||||+|||++.++.+||+|||
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~-----~~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFG 203 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHS-----SQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFG 203 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTS-----SSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEEeCCC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecc
Confidence 7899999995 689998864 3569999999999999999999999 899999999999999999999999999
Q ss_pred cceecCCCCc---eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 733 LVKNAPDGKY---SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 733 ~a~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+|+....... ......+||+.|||||++.+. -.++.++||||+|||
T Consensus 204 la~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~--~~~~~~~DiWSlG~i 252 (398)
T 4b99_A 204 MARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL--HEYTQAIDLWSVGCI 252 (398)
T ss_dssp TCBCC-------CCCCCSSCCCCTTCCHHHHTTC--SCCCTHHHHHHHHHH
T ss_pred eeeecccCccccccccccceeChHhcCHHHhcCC--CCCCChhheehhHHH
Confidence 9987644321 122446899999999987764 134678999999986
No 29
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.2e-36 Score=346.79 Aligned_cols=368 Identities=17% Similarity=0.166 Sum_probs=267.6
Q ss_pred CCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEec
Q 003982 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSL 144 (782)
Q Consensus 66 ~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 144 (782)
.+++.|+|++|++++..+.+|..+++|++|+|++|++++.++ .|.++++|++|+|++|+++.+++..|.++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 478899999999998878889999999999999999998877 6899999999999999999999888999999999999
Q ss_pred cCCCCCCCCCCCcccCCCcccCeeeccccccCCC-CcccccCCCCCcEEEcccCcCCCCCCccccc-ccc----chhhcc
Q 003982 145 SDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGL-IPDFFDSFSNLQNLRLSYNNFTGSLPASFAK-SDI----QNLWMN 218 (782)
Q Consensus 145 s~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~l----~~l~l~ 218 (782)
++|++.. ..+..+.++++|++|+|++|.+++. +|..|.++++|++|++++|++++..|..+.. ..+ ..+++.
T Consensus 108 ~~n~l~~--l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~ 185 (570)
T 2z63_A 108 VETNLAS--LENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLS 185 (570)
T ss_dssp TTSCCCC--STTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECT
T ss_pred ccccccc--CCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccC
Confidence 9999888 2233588899999999999999874 5888999999999999999887554444432 122 223333
Q ss_pred cccCCCc-------------------------------------------------------------------------
Q 003982 219 DQQLGLS------------------------------------------------------------------------- 225 (782)
Q Consensus 219 ~~~~~~~------------------------------------------------------------------------- 225 (782)
.|.+...
T Consensus 186 ~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~ 265 (570)
T 2z63_A 186 LNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 265 (570)
T ss_dssp TCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEE
T ss_pred CCCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhh
Confidence 3322100
Q ss_pred -------cccccccCCCCCcEEEeecccccCCCCCC------------------------------------------CC
Q 003982 226 -------GTLDVLSGMTQLRQVWLHKNQFTGPIPDL------------------------------------------SK 256 (782)
Q Consensus 226 -------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~------------------------------------------~~ 256 (782)
.....+..+++|++|++++|++++.+..+ ..
T Consensus 266 ~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~ 345 (570)
T 2z63_A 266 YLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVD 345 (570)
T ss_dssp ETTEEESCSTTTTGGGTTCSEEEEESCEECSCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCB
T ss_pred cchhhhhhchhhhcCcCcccEEEecCccchhhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCcccccccccc
Confidence 01123445667777777777666544333 34
Q ss_pred CCCCCEEEcCCCcCccCc--chhhcCCCCCCEEEccCCcccCCCCC--CCCCccEEEccCCcCCCCCCCCCCCCChhhhh
Q 003982 257 CESLFDLSLRDNQLTGVV--PASVISLPALLNISLQNNKLQGPYPL--FPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTT 332 (782)
Q Consensus 257 l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~l~~N~l~~~~~~--~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~ 332 (782)
+++|++|++++|++++.. |..+..+++|++|++++|++.+..+. .+.+|+.|++++|.+.+.....
T Consensus 346 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~---------- 415 (570)
T 2z63_A 346 LPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFS---------- 415 (570)
T ss_dssp CTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSC----------
T ss_pred CCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchh----------
Confidence 456666666666666443 56666666677777777666654433 2456777777777766543110
Q ss_pred HHHhhcCCCCCcccc-cCcCCCCCCCCCCcccccCCceeEEEccCcccc-cccCccccccccCCeEecccccccccCCcc
Q 003982 333 LLQIAGDMGYPAILS-DSWEGNNACDGWPFVTCSQGRIITINLANKLLA-GNISPAYANLTSLKNLYLQQNNLTGPIPDG 410 (782)
Q Consensus 333 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 410 (782)
.+.....+. .+...|...+..|..+..+++|++|+|++|.++ +.+|..+..+++|++|+|++|++++..|..
T Consensus 416 ------~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~ 489 (570)
T 2z63_A 416 ------VFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA 489 (570)
T ss_dssp ------TTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTT
T ss_pred ------hhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhh
Confidence 001111122 223334344556777888899999999999998 679999999999999999999999888999
Q ss_pred CCCCCCCCeEecCCCcCCCCCCCC-C--CCcceecCCCCCCCCC
Q 003982 411 LTKLASLQNLDVSNNNLSGKVPDF-G--SNVKFTVSPGNPFIGT 451 (782)
Q Consensus 411 ~~~l~~L~~L~ls~N~l~g~~p~~-~--~~~~~~~~~~n~~~~~ 451 (782)
|..+++|+.|+|++|++++.+|.. . ..+....+.+||+.|.
T Consensus 490 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 533 (570)
T 2z63_A 490 FNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 533 (570)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred hhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCC
Confidence 999999999999999999988853 2 5677788999998874
No 30
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=4.8e-36 Score=336.28 Aligned_cols=334 Identities=20% Similarity=0.187 Sum_probs=282.3
Q ss_pred EEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCccc-CCCCCCCCCCCCCCEEeccCC
Q 003982 70 TISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFT-SVPTGCFDGLTNLQVLSLSDN 147 (782)
Q Consensus 70 ~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~N 147 (782)
.++.++++++ .+|. +. ++|++|+|++|.|++.+| .|.++++|++|+|++|.++ .+++..|.++++|++|+|++|
T Consensus 14 ~~~c~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n 89 (455)
T 3v47_A 14 NAICINRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYN 89 (455)
T ss_dssp EEECCSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTC
T ss_pred ccCcCCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCC
Confidence 5888999988 6666 33 789999999999999877 7999999999999999997 678888999999999999999
Q ss_pred CCCCCCCCCcccCCCcccCeeeccccccCCCCccc--ccCCCCCcEEEcccCcCCCCCCcc-ccc-cccchhhcccccCC
Q 003982 148 PNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDF--FDSFSNLQNLRLSYNNFTGSLPAS-FAK-SDIQNLWMNDQQLG 223 (782)
Q Consensus 148 ~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~--~~~l~~L~~L~Ls~N~l~~~~p~~-~~~-~~l~~l~l~~~~~~ 223 (782)
++.. ..|..|.++++|++|+|++|++++..+.. |..+++|++|+|++|++++..|.. +.. ..|++|++++|.+.
T Consensus 90 ~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~ 167 (455)
T 3v47_A 90 QFLQ--LETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVK 167 (455)
T ss_dssp TTCE--ECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBS
T ss_pred ccCc--cChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccc
Confidence 9988 56889999999999999999999855544 999999999999999999777876 433 68889999998875
Q ss_pred CccccccccCC--CCCcEEEeecccccCCCCC---------CCCCCCCCEEEcCCCcCccCcchhhcCC---CCCCEEEc
Q 003982 224 LSGTLDVLSGM--TQLRQVWLHKNQFTGPIPD---------LSKCESLFDLSLRDNQLTGVVPASVISL---PALLNISL 289 (782)
Q Consensus 224 ~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~---------~~~l~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~l 289 (782)
.... ..+..+ ++|+.|++++|.+++..+. +..+++|++|++++|++++..|..+... ++|+.|++
T Consensus 168 ~~~~-~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l 246 (455)
T 3v47_A 168 SICE-EDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLIL 246 (455)
T ss_dssp CCCT-TTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEEC
T ss_pred ccCh-hhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEee
Confidence 4322 234444 6899999999999886653 3356889999999999999888888755 88999999
Q ss_pred cCCcccCCCCCC---------------CCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCC
Q 003982 290 QNNKLQGPYPLF---------------PSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNN 354 (782)
Q Consensus 290 ~~N~l~~~~~~~---------------~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (782)
++|.+.+..... ..+|+.|++++|++.+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~----------------------------------- 291 (455)
T 3v47_A 247 SNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALL----------------------------------- 291 (455)
T ss_dssp TTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEEC-----------------------------------
T ss_pred ccccccccccchhhhccCcccccccccccCceEEEecCccccccc-----------------------------------
Confidence 999776532211 247999999999886543
Q ss_pred CCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcCCCCCCC-
Q 003982 355 ACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVPD- 433 (782)
Q Consensus 355 ~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~- 433 (782)
|..+..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|..+++|+.|+|++|++++.+|.
T Consensus 292 -----~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 366 (455)
T 3v47_A 292 -----KSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQS 366 (455)
T ss_dssp -----TTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTT
T ss_pred -----hhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhh
Confidence 45567788999999999999999999999999999999999999988899999999999999999999999884
Q ss_pred CC--CCcceecCCCCCCCC
Q 003982 434 FG--SNVKFTVSPGNPFIG 450 (782)
Q Consensus 434 ~~--~~~~~~~~~~n~~~~ 450 (782)
+. ..+....+.+|.+..
T Consensus 367 ~~~l~~L~~L~L~~N~l~~ 385 (455)
T 3v47_A 367 FLGLPNLKELALDTNQLKS 385 (455)
T ss_dssp TTTCTTCCEEECCSSCCSC
T ss_pred ccccccccEEECCCCcccc
Confidence 43 577888899998764
No 31
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=6.1e-36 Score=349.93 Aligned_cols=367 Identities=19% Similarity=0.178 Sum_probs=283.5
Q ss_pred CCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEec
Q 003982 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSL 144 (782)
Q Consensus 66 ~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 144 (782)
..++.|||++|+|++..+.+|.++++|++|+|++|+|++++| +|.++++|++|+|++|+|+.+|+++|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 479999999999998777889999999999999999999888 7999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCcccCCCcccCeeeccccccCCC-CcccccCCCCCcEEEcccCcCCCCCCcccccc-------------
Q 003982 145 SDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGL-IPDFFDSFSNLQNLRLSYNNFTGSLPASFAKS------------- 210 (782)
Q Consensus 145 s~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~------------- 210 (782)
++|+++. ..+..|.++++|++|+|++|.+++. .|..+..+++|++|+|++|++++..|..+...
T Consensus 132 s~N~l~~--l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls 209 (635)
T 4g8a_A 132 VETNLAS--LENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLS 209 (635)
T ss_dssp TTSCCCC--STTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECT
T ss_pred CCCcCCC--CChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcc
Confidence 9999998 4456799999999999999999874 58889999999999999999986555443210
Q ss_pred ---------------ccchhhcccc-------------------------------------------------------
Q 003982 211 ---------------DIQNLWMNDQ------------------------------------------------------- 220 (782)
Q Consensus 211 ---------------~l~~l~l~~~------------------------------------------------------- 220 (782)
.+..+.+..|
T Consensus 210 ~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~ 289 (635)
T 4g8a_A 210 LNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 289 (635)
T ss_dssp TCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEE
T ss_pred cCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhh
Confidence 0000111100
Q ss_pred -------------------------------------------------cCCCc------------------cccccccC
Q 003982 221 -------------------------------------------------QLGLS------------------GTLDVLSG 233 (782)
Q Consensus 221 -------------------------------------------------~~~~~------------------~~~~~~~~ 233 (782)
.+... .......+
T Consensus 290 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~ 369 (635)
T 4g8a_A 290 YLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVD 369 (635)
T ss_dssp CCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCB
T ss_pred hhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCccccc
Confidence 00000 00001124
Q ss_pred CCCCcEEEeecccccCCC--C-CCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCC----CCCCcc
Q 003982 234 MTQLRQVWLHKNQFTGPI--P-DLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPL----FPSKVQ 306 (782)
Q Consensus 234 l~~L~~L~L~~N~l~~~~--~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~----~~~~l~ 306 (782)
+++|+.|++++|.+.... + .+..+.+|+.|++..|.+. ..+..+..+++|+.+++++|++....+. .+.+++
T Consensus 370 l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~ 448 (635)
T 4g8a_A 370 LPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLI 448 (635)
T ss_dssp CTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCC
T ss_pred ccccccchhhccccccccccccchhhhhhhhhhhccccccc-cccccccccccccchhhhhccccccccccccccccccc
Confidence 567888888888776422 2 2456778888888888887 4556677888888888888887765543 235778
Q ss_pred EEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCC-CCCCcccccCCceeEEEccCcccccccCc
Q 003982 307 KVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNAC-DGWPFVTCSQGRIITINLANKLLAGNISP 385 (782)
Q Consensus 307 ~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~ 385 (782)
.++++.|.+........... +........+|+.. ...|..+..+++|++|+|++|+|++..|.
T Consensus 449 ~l~ls~n~l~~~~~~~~~~~----------------~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~ 512 (635)
T 4g8a_A 449 YLDISHTHTRVAFNGIFNGL----------------SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT 512 (635)
T ss_dssp EEECTTSCCEECCTTTTTTC----------------TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTT
T ss_pred cccccccccccccccccccc----------------hhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChH
Confidence 88888888876553221110 11111222333322 24577788899999999999999999999
Q ss_pred cccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcCCCCCCCCC----CCcceecCCCCCCCCC
Q 003982 386 AYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVPDFG----SNVKFTVSPGNPFIGT 451 (782)
Q Consensus 386 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~----~~~~~~~~~~n~~~~~ 451 (782)
.|.++++|++|+|++|+|++..|..|..+++|+.|||++|+|++.+|... ..+....+.+|||.|.
T Consensus 513 ~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 513 AFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp TTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred HHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 99999999999999999999999999999999999999999999999532 5677889999999884
No 32
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=3.3e-36 Score=350.27 Aligned_cols=364 Identities=18% Similarity=0.193 Sum_probs=247.5
Q ss_pred CEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCC--EEeCCCCcccCCCCCCCCCC-------
Q 003982 67 RVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQ--DIYLDNNNFTSVPTGCFDGL------- 136 (782)
Q Consensus 67 ~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~--~L~Ls~n~l~~~~~~~~~~l------- 136 (782)
++++|+|++|.+.+...+.+..+++|++|++++|.+++.++ .|..+++|+ +|++++|+++++++..|...
T Consensus 130 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l 209 (606)
T 3t6q_A 130 TLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNF 209 (606)
T ss_dssp TCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEEC
T ss_pred cccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhcccccccc
Confidence 57777777777776443444447777777777777777665 566677777 67777777776666554321
Q ss_pred --------------------------------------------CCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccc
Q 003982 137 --------------------------------------------TNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDN 172 (782)
Q Consensus 137 --------------------------------------------~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~ 172 (782)
.+|++|++++|++.. ..+..|..+++|++|++++
T Consensus 210 ~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~ 287 (606)
T 3t6q_A 210 GGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFN--ISSNTFHCFSGLQELDLTA 287 (606)
T ss_dssp TTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSS--CCTTTTTTCTTCSEEECTT
T ss_pred CCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCc--cCHHHhccccCCCEEeccC
Confidence 045666666666665 3444566667777777777
Q ss_pred cccCCCCcccccCCCCCcEEEcccCcCCCCCCccccc-cccchhhcccccCCCccccccccCCCCCcEEEeecccccCCC
Q 003982 173 ANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAK-SDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPI 251 (782)
Q Consensus 173 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 251 (782)
|+++. +|..+..+++|++|++++|++++..|..+.. ..|+.|++++|.+........+.++++|++|++++|++++..
T Consensus 288 n~l~~-lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 366 (606)
T 3t6q_A 288 THLSE-LPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSD 366 (606)
T ss_dssp SCCSC-CCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEE
T ss_pred CccCC-CChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCcccccc
Confidence 76663 3556666677777777777766544545444 456666666666554444445666777777777777776643
Q ss_pred ---CCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCC----CCCCccEEEccCCcCCCCCCCCCC
Q 003982 252 ---PDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPL----FPSKVQKVSLDHNNFCKNSSDAGK 324 (782)
Q Consensus 252 ---~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~----~~~~l~~L~l~~N~~~~~~~~~~~ 324 (782)
..+..+++|++|++++|++++..|..|..+++|++|++++|++++..+. .+.+|+.|++++|.+.+.......
T Consensus 367 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 446 (606)
T 3t6q_A 367 CCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFD 446 (606)
T ss_dssp ESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTT
T ss_pred CcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHh
Confidence 3466677777777777777766667777777777777777777665443 234667777777766554322111
Q ss_pred CCChhhhhHHHhhcCCCCCcccccCcCCCCCCC----CCCcccccCCceeEEEccCcccccccCccccccccCCeEeccc
Q 003982 325 PCDPQVTTLLQIAGDMGYPAILSDSWEGNNACD----GWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQ 400 (782)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 400 (782)
....+......++.+. ..+..+..+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 447 -----------------~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 509 (606)
T 3t6q_A 447 -----------------GLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSH 509 (606)
T ss_dssp -----------------TCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred -----------------CCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCC
Confidence 1111111112222221 2235577889999999999999999999999999999999999
Q ss_pred ccccccCCccCCCCCCCCeEecCCCcCCCCCCCC-C--CCcceecCCCCCCCCC
Q 003982 401 NNLTGPIPDGLTKLASLQNLDVSNNNLSGKVPDF-G--SNVKFTVSPGNPFIGT 451 (782)
Q Consensus 401 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~--~~~~~~~~~~n~~~~~ 451 (782)
|++++.+|..|..++.| .|++++|++++.+|.. . ..+....+.+||+.|.
T Consensus 510 N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 562 (606)
T 3t6q_A 510 NRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCT 562 (606)
T ss_dssp SCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECS
T ss_pred CccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCcccc
Confidence 99999999999999999 9999999999988853 2 5677889999999873
No 33
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4.7e-37 Score=330.15 Aligned_cols=188 Identities=23% Similarity=0.360 Sum_probs=158.0
Q ss_pred HHHHhcCCCccceeecccceEEEEEEe----CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhc-CCCCcceEEeEEEe
Q 003982 576 LRQVTDNFSEANILGRGGFGVVYGGEL----PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCIN 650 (782)
Q Consensus 576 l~~~~~~y~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~ 650 (782)
+....++|++.+.||+|+||+||+|.. .+++.||||++.+.. ...++.+|+++++.+ +||||+++++++.+
T Consensus 16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~ 91 (361)
T 4f9c_A 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS----HPIRIAAELQCLTVAGGQDNVMGVKYCFRK 91 (361)
T ss_dssp SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE
T ss_pred cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc----CHHHHHHHHHHHHHhcCCCCCceEEEEEEE
Confidence 334678899999999999999999954 246789999986543 346788999999998 69999999999999
Q ss_pred CCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCC-CcEEEE
Q 003982 651 GSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD-MRAKVA 729 (782)
Q Consensus 651 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~-~~~kL~ 729 (782)
.++.|+||||+++|+|.+++. .+++.++..+++|++.||+|||+ +||+||||||+|||++.+ +.+||+
T Consensus 92 ~~~~~lvmE~~~g~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~ 160 (361)
T 4f9c_A 92 NDHVVIAMPYLEHESFLDILN--------SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALV 160 (361)
T ss_dssp TTEEEEEEECCCCCCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEEC
T ss_pred CCEEEEEEeCCCcccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEEC
Confidence 999999999999999999883 38999999999999999999999 899999999999999876 799999
Q ss_pred eeccceecCCCCc---------------------------eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 730 DFGLVKNAPDGKY---------------------------SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 730 DfG~a~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|||+|+...+... ......+||+.|||||++.+. ..++.++||||+|||
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~y~~~~DiWSlG~i 236 (361)
T 4f9c_A 161 DFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKC--PNQTTAIDMWSAGVI 236 (361)
T ss_dssp CCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTC--SCCCTHHHHHHHHHH
T ss_pred cCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCC--CCCCCccchhhhHHH
Confidence 9999986654221 011235799999999998764 235678899999986
No 34
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=3.6e-35 Score=346.30 Aligned_cols=370 Identities=17% Similarity=0.183 Sum_probs=251.6
Q ss_pred CccccceEeCC----------CCCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCC
Q 003982 54 YCEWTGINCDN----------SNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDN 122 (782)
Q Consensus 54 ~c~w~gv~c~~----------~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~ 122 (782)
.|.++-|.|+. ..+++.|+|++|++++..+..|..+++|++|+|++|.+++.+| .|.++++|++|+|++
T Consensus 3 ~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 82 (680)
T 1ziw_A 3 TVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQH 82 (680)
T ss_dssp -CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCS
T ss_pred eeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCC
Confidence 35566677754 2479999999999998777889999999999999999999887 688999999999999
Q ss_pred CcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCC
Q 003982 123 NNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGS 202 (782)
Q Consensus 123 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 202 (782)
|+++.+|+..|.++++|++|+|++|++.. ..|..|.++++|++|+|++|.+++..+..+..+++|++|++++|++++.
T Consensus 83 n~l~~l~~~~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 160 (680)
T 1ziw_A 83 NELSQLSDKTFAFCTNLTELHLMSNSIQK--IKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQAL 160 (680)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCCCC--CCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCB
T ss_pred CccCccChhhhccCCCCCEEECCCCccCc--cChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCccccc
Confidence 99999999899999999999999999987 4557899999999999999999999899999999999999999999866
Q ss_pred CCccccc---cccchhhcccccCCCccc--------------------------------------------------cc
Q 003982 203 LPASFAK---SDIQNLWMNDQQLGLSGT--------------------------------------------------LD 229 (782)
Q Consensus 203 ~p~~~~~---~~l~~l~l~~~~~~~~~~--------------------------------------------------~~ 229 (782)
.+..+.. ..|+.|+++.|.+..... ..
T Consensus 161 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~ 240 (680)
T 1ziw_A 161 KSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNT 240 (680)
T ss_dssp CHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTT
T ss_pred CHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChh
Confidence 6655432 567788887776542211 11
Q ss_pred cccCCC--CCcEEEeecccccCCCC-CCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCC-----CCC-
Q 003982 230 VLSGMT--QLRQVWLHKNQFTGPIP-DLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGP-----YPL- 300 (782)
Q Consensus 230 ~~~~l~--~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-----~~~- 300 (782)
.+.+++ +|++|+|++|++++.++ .|..+++|++|+|++|++++..|..|.++++|+.|++++|...+. +|.
T Consensus 241 ~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i 320 (680)
T 1ziw_A 241 TFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKI 320 (680)
T ss_dssp TTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEE
T ss_pred HhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhccccccccccc
Confidence 233332 37777777777766554 366677777777777777766666666666666666665544431 111
Q ss_pred ------CCCCccEEEccCCcCCCCCCCCCCCC-ChhhhhHHHhhcCC---------CCC----cccc-cCcCCCCCCCCC
Q 003982 301 ------FPSKVQKVSLDHNNFCKNSSDAGKPC-DPQVTTLLQIAGDM---------GYP----AILS-DSWEGNNACDGW 359 (782)
Q Consensus 301 ------~~~~l~~L~l~~N~~~~~~~~~~~~~-~~~~~~~~~~~~~~---------~~~----~~~~-~~~~~~~~~~~~ 359 (782)
.+.+|+.|++++|+++++........ .... +.+..+. .+. ..+. .....|...+..
T Consensus 321 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~---L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~ 397 (680)
T 1ziw_A 321 DDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKY---LSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIE 397 (680)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCE---EECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEEC
T ss_pred ChhhcccCCCCCEEECCCCccCCCChhHhccccCCcE---EECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEC
Confidence 23567888888888877654322211 0000 0000000 000 0111 122223333344
Q ss_pred CcccccCCceeEEEccCcccccccC-ccccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcCC
Q 003982 360 PFVTCSQGRIITINLANKLLAGNIS-PAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLS 428 (782)
Q Consensus 360 p~~~~~~~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 428 (782)
|..+..+++|+.|+|++|.+++.+| ..|.++++|++|+|++|++.+..+..|..+++|+.|++++|.++
T Consensus 398 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~ 467 (680)
T 1ziw_A 398 SDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALK 467 (680)
T ss_dssp TTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCB
T ss_pred hhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhcccccc
Confidence 5666677777777777777776665 46777777777777777766555555555555555555555544
No 35
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=8e-37 Score=345.17 Aligned_cols=188 Identities=25% Similarity=0.395 Sum_probs=159.5
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCCh-hh---HHHHHHHHHHHHhcCCCCcceEEeEEEeCCeE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGN-KG---LSEFQAEIAVLTKVRHRHLVALLGYCINGSER 654 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~---~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~ 654 (782)
.++|++.++||+|+||+||+|+. .+|+.||||++++..... .. ....++++.+++.++||||+++++++.+++..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 46799999999999999999954 579999999997643211 12 22334456677788999999999999999999
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccc
Q 003982 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV 734 (782)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a 734 (782)
|+|||||+||+|.+++.+. +.+++.++..++.||+.||+|||+ +|||||||||+|||++.+|.+||+|||+|
T Consensus 268 ylVmEy~~GGdL~~~l~~~-----~~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA 339 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQH-----GVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA 339 (689)
T ss_dssp EEEECCCCSCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEeccccee
Confidence 9999999999999999763 458999999999999999999998 89999999999999999999999999999
Q ss_pred eecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 735 KNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 735 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+....... ...+||+.|||||++.+. .+++.++|+||+||+
T Consensus 340 ~~~~~~~~---~t~~GTp~YmAPEvl~~~--~~y~~~vDiWSLGvi 380 (689)
T 3v5w_A 340 CDFSKKKP---HASVGTHGYMAPEVLQKG--VAYDSSADWFSLGCM 380 (689)
T ss_dssp EECSSCCC---CSCCSCGGGCCHHHHSTT--CCCCTHHHHHHHHHH
T ss_pred eecCCCCC---CCccCCcCccCHHHHhCC--CCCCcHHHHHHHHHH
Confidence 98765432 346899999999998643 246778999999986
No 36
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.1e-36 Score=338.10 Aligned_cols=325 Identities=21% Similarity=0.238 Sum_probs=285.4
Q ss_pred ccccceEeCCCCCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCC
Q 003982 55 CEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCF 133 (782)
Q Consensus 55 c~w~gv~c~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~ 133 (782)
|.. +..|.... +.++.++++++ .+|..+. ++|+.|+|++|+|++.++ .|.++++|++|+|++|.++.+++..|
T Consensus 3 Cp~-~C~C~~~~--~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~ 76 (477)
T 2id5_A 3 CPP-RCECSAQD--RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAF 76 (477)
T ss_dssp CST-TCEEETTT--TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTT
T ss_pred ccC-CCeECCCC--CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhh
Confidence 553 56676432 46889999998 6777664 689999999999999887 89999999999999999999999999
Q ss_pred CCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccc
Q 003982 134 DGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQ 213 (782)
Q Consensus 134 ~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~ 213 (782)
.++++|++|+|++|++.. ..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..|..
T Consensus 77 ~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~------- 147 (477)
T 2id5_A 77 NNLFNLRTLGLRSNRLKL--IPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRA------- 147 (477)
T ss_dssp TTCTTCCEEECCSSCCCS--CCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTS-------
T ss_pred hCCccCCEEECCCCcCCc--cCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhh-------
Confidence 999999999999999998 34456899999999999999999999999999999999999999998655554
Q ss_pred hhhcccccCCCccccccccCCCCCcEEEeecccccCCCCC-CCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCC
Q 003982 214 NLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPD-LSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNN 292 (782)
Q Consensus 214 ~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 292 (782)
|.++++|++|+|++|++++.++. +..+++|+.|+|++|++++..+..|..+++|+.|++++|
T Consensus 148 -----------------~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~ 210 (477)
T 2id5_A 148 -----------------FSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHW 210 (477)
T ss_dssp -----------------STTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECC
T ss_pred -----------------ccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCC
Confidence 44689999999999999987764 899999999999999999988899999999999999999
Q ss_pred cccCCCCCC---CCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCce
Q 003982 293 KLQGPYPLF---PSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRI 369 (782)
Q Consensus 293 ~l~~~~~~~---~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L 369 (782)
++.+.+|.. ..+|+.|++++|+++.++ +..+..+++|
T Consensus 211 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~----------------------------------------~~~~~~l~~L 250 (477)
T 2id5_A 211 PYLDTMTPNCLYGLNLTSLSITHCNLTAVP----------------------------------------YLAVRHLVYL 250 (477)
T ss_dssp TTCCEECTTTTTTCCCSEEEEESSCCCSCC----------------------------------------HHHHTTCTTC
T ss_pred ccccccCcccccCccccEEECcCCcccccC----------------------------------------HHHhcCcccc
Confidence 988766643 248999999999886544 1245667899
Q ss_pred eEEEccCcccccccCccccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcCCCCCCCC-C--CCcceecCCCC
Q 003982 370 ITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVPDF-G--SNVKFTVSPGN 446 (782)
Q Consensus 370 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~--~~~~~~~~~~n 446 (782)
+.|+|++|.+++..+..|.++++|++|+|++|++++..|..|..+++|+.|+|++|+|++.++.. . ..+....+.+|
T Consensus 251 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 330 (477)
T 2id5_A 251 RFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN 330 (477)
T ss_dssp CEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSS
T ss_pred CeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCC
Confidence 99999999999988889999999999999999999999999999999999999999999987743 2 56778899999
Q ss_pred CCCCC
Q 003982 447 PFIGT 451 (782)
Q Consensus 447 ~~~~~ 451 (782)
|+.|.
T Consensus 331 ~l~c~ 335 (477)
T 2id5_A 331 PLACD 335 (477)
T ss_dssp CEECS
T ss_pred CccCc
Confidence 99885
No 37
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=338.37 Aligned_cols=358 Identities=18% Similarity=0.181 Sum_probs=258.4
Q ss_pred CCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEec
Q 003982 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSL 144 (782)
Q Consensus 66 ~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 144 (782)
.+++.|+|++|.+++..|..|..+++|++|+|++|++++..| .|.++++|++|+|++|+|+.+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~---~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCH---PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECC---CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCcc---ccCCccEEec
Confidence 579999999999998888889999999999999999999877 799999999999999999998876 7999999999
Q ss_pred cCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCC--cEEEcccCcC--CCCCCccccc-----------
Q 003982 145 SDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNL--QNLRLSYNNF--TGSLPASFAK----------- 209 (782)
Q Consensus 145 s~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L--~~L~Ls~N~l--~~~~p~~~~~----------- 209 (782)
++|++... .+|..+.++++|++|+|++|++++ ..+..+++| ++|++++|++ .+..|..+..
T Consensus 98 ~~N~l~~~-~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~ 173 (520)
T 2z7x_B 98 SFNAFDAL-PICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFP 173 (520)
T ss_dssp CSSCCSSC-CCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECC
T ss_pred cCCccccc-cchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEec
Confidence 99999862 367899999999999999999987 467777888 9999999999 6677766654
Q ss_pred ----------------cccchhhcccccCC-----CccccccccC---------------------------CCCCcEEE
Q 003982 210 ----------------SDIQNLWMNDQQLG-----LSGTLDVLSG---------------------------MTQLRQVW 241 (782)
Q Consensus 210 ----------------~~l~~l~l~~~~~~-----~~~~~~~~~~---------------------------l~~L~~L~ 241 (782)
..++.+++..|... ..+..+.+.. .++|++|+
T Consensus 174 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~ 253 (520)
T 2z7x_B 174 TNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFS 253 (520)
T ss_dssp SSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEE
T ss_pred cCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEE
Confidence 22344444443200 0000001111 23677777
Q ss_pred eecccccCCCC-CC-----CCCCCCCEEEcCCCcCccCcc-hh-------------------------hcCCCCCCEEEc
Q 003982 242 LHKNQFTGPIP-DL-----SKCESLFDLSLRDNQLTGVVP-AS-------------------------VISLPALLNISL 289 (782)
Q Consensus 242 L~~N~l~~~~~-~~-----~~l~~L~~L~L~~N~l~~~~p-~~-------------------------~~~l~~L~~L~l 289 (782)
+++|++++..| .+ ..+++|+.++++.|.+ .+| .. +..+++|++|++
T Consensus 254 l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L 331 (520)
T 2z7x_B 254 ISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDF 331 (520)
T ss_dssp EEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEEC
T ss_pred eecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEe
Confidence 77777775444 34 5555555555555554 222 11 156777888888
Q ss_pred cCCcccCCCCCC---CCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCC-CCcc-cc
Q 003982 290 QNNKLQGPYPLF---PSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDG-WPFV-TC 364 (782)
Q Consensus 290 ~~N~l~~~~~~~---~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~-~~ 364 (782)
++|++++.+|.. +.+|+.|++++|+++++. .++..+.....+.....+++.+.. +|.. +.
T Consensus 332 s~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~---------------~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~ 396 (520)
T 2z7x_B 332 SNNLLTDTVFENCGHLTELETLILQMNQLKELS---------------KIAEMTTQMKSLQQLDISQNSVSYDEKKGDCS 396 (520)
T ss_dssp CSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHH---------------HHHHHHTTCTTCCEEECCSSCCBCCGGGCSCC
T ss_pred ECCccChhhhhhhccCCCCCEEEccCCccCccc---------------cchHHHhhCCCCCEEECCCCcCCcccccchhc
Confidence 888887766543 356778888888776432 111111111222222223333333 6654 56
Q ss_pred cCCceeEEEccCcccccccCccccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcCCCCCCC-CC--CCccee
Q 003982 365 SQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVPD-FG--SNVKFT 441 (782)
Q Consensus 365 ~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~-~~--~~~~~~ 441 (782)
.+++|++|++++|.+++.+|..+. ++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++.++. +. ..+...
T Consensus 397 ~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L 473 (520)
T 2z7x_B 397 WTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKI 473 (520)
T ss_dssp CCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEE
Confidence 678999999999999988888775 79999999999999 8898888999999999999999965554 43 467778
Q ss_pred cCCCCCCCC
Q 003982 442 VSPGNPFIG 450 (782)
Q Consensus 442 ~~~~n~~~~ 450 (782)
.+.+||+.|
T Consensus 474 ~l~~N~~~c 482 (520)
T 2z7x_B 474 WLHTNPWDC 482 (520)
T ss_dssp ECCSSCBCC
T ss_pred ECcCCCCcc
Confidence 899999876
No 38
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3.1e-36 Score=350.88 Aligned_cols=338 Identities=17% Similarity=0.219 Sum_probs=285.8
Q ss_pred CCEEEEEeCCCCCCcc-----------------cCcccc--CCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCc-
Q 003982 66 NRVTTISLAKSGLSGT-----------------LSPEIS--SLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNN- 124 (782)
Q Consensus 66 ~~v~~L~l~~~~l~~~-----------------~~~~l~--~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~- 124 (782)
.+++.|+|++|.++|. +|+.++ ++++|++|+|++|++.+.+| .|.++++|++|+|++|+
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~ 285 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRG 285 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCC
Confidence 4799999999999996 999999 99999999999999999887 79999999999999998
Q ss_pred ccC--CCCCCCCCC------CCCCEEeccCCCCCCCCCCCc--ccCCCcccCeeeccccccCCCCcccccCCCCCcEEEc
Q 003982 125 FTS--VPTGCFDGL------TNLQVLSLSDNPNLAPWPFPN--ELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRL 194 (782)
Q Consensus 125 l~~--~~~~~~~~l------~~L~~L~Ls~N~l~~~~~~p~--~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 194 (782)
+++ +|.. +.++ ++|++|+|++|++.. +|. .+.++++|++|+|++|+++|.+| .|..+++|++|+|
T Consensus 286 l~~~~lp~~-~~~L~~~~~l~~L~~L~L~~n~l~~---ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L 360 (636)
T 4eco_A 286 ISGEQLKDD-WQALADAPVGEKIQIIYIGYNNLKT---FPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNL 360 (636)
T ss_dssp SCHHHHHHH-HHHHHHSGGGGTCCEEECCSSCCSS---CCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEEC
T ss_pred CccccchHH-HHhhhccccCCCCCEEECCCCcCCc---cCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEEC
Confidence 986 5543 5554 999999999999996 788 89999999999999999998888 8999999999999
Q ss_pred ccCcCCCCCCccccc-cc-cchhhcccccCCCccccccccCC--CCCcEEEeecccccCCCCC-CC-------CCCCCCE
Q 003982 195 SYNNFTGSLPASFAK-SD-IQNLWMNDQQLGLSGTLDVLSGM--TQLRQVWLHKNQFTGPIPD-LS-------KCESLFD 262 (782)
Q Consensus 195 s~N~l~~~~p~~~~~-~~-l~~l~l~~~~~~~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~-~~-------~l~~L~~ 262 (782)
++|+++ .+|..+.. .. |+.|++++|.+. ..+..+..+ ++|++|++++|++++..|. +. .+++|++
T Consensus 361 ~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~--~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~ 437 (636)
T 4eco_A 361 AYNQIT-EIPANFCGFTEQVENLSFAHNKLK--YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSS 437 (636)
T ss_dssp CSSEEE-ECCTTSEEECTTCCEEECCSSCCS--SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEE
T ss_pred CCCccc-cccHhhhhhcccCcEEEccCCcCc--ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCE
Confidence 999999 89988877 45 999999999987 333445554 4899999999999997664 66 7889999
Q ss_pred EEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCCCCC----------CccEEEccCCcCCCCCCCCCCCCChhhhh
Q 003982 263 LSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPS----------KVQKVSLDHNNFCKNSSDAGKPCDPQVTT 332 (782)
Q Consensus 263 L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~----------~l~~L~l~~N~~~~~~~~~~~~~~~~~~~ 332 (782)
|+|++|+|+...+..+..+++|++|++++|+++...+..+. +|+.|+|++|+++.++.....
T Consensus 438 L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~-------- 509 (636)
T 4eco_A 438 INLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTKLSDDFRA-------- 509 (636)
T ss_dssp EECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCCBCCGGGST--------
T ss_pred EECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCCccChhhhh--------
Confidence 99999999955555566799999999999999954444443 899999999999866522110
Q ss_pred HHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEc------cCcccccccCccccccccCCeEeccccccccc
Q 003982 333 LLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINL------ANKLLAGNISPAYANLTSLKNLYLQQNNLTGP 406 (782)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 406 (782)
.....+......++.+..+|..+..+++|++|+| ++|++.+.+|..+.++++|++|+|++|+| +.
T Consensus 510 --------~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ 580 (636)
T 4eco_A 510 --------TTLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RK 580 (636)
T ss_dssp --------TTCTTCCEEECCSSCCSSCCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CB
T ss_pred --------ccCCCcCEEECCCCCCCCcChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-Cc
Confidence 0112233334445556669999999999999999 56889999999999999999999999999 68
Q ss_pred CCccCCCCCCCCeEecCCCcCCCC
Q 003982 407 IPDGLTKLASLQNLDVSNNNLSGK 430 (782)
Q Consensus 407 ~p~~~~~l~~L~~L~ls~N~l~g~ 430 (782)
+|..+. ++|+.|||++|+++..
T Consensus 581 ip~~~~--~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 581 VNEKIT--PNISVLDIKDNPNISI 602 (636)
T ss_dssp CCSCCC--TTCCEEECCSCTTCEE
T ss_pred cCHhHh--CcCCEEECcCCCCccc
Confidence 998877 8999999999988753
No 39
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1e-34 Score=342.50 Aligned_cols=369 Identities=21% Similarity=0.231 Sum_probs=287.2
Q ss_pred CCEEEEEeCCCCCCcccCccccCCcc--CceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEE
Q 003982 66 NRVTTISLAKSGLSGTLSPEISSLTQ--LETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVL 142 (782)
Q Consensus 66 ~~v~~L~l~~~~l~~~~~~~l~~l~~--L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 142 (782)
..++.|++++|.+++..|..+..++. |++|+|++|++++.+| .|..+++|++|+|++|+++++++..|.++++|++|
T Consensus 222 ~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 301 (680)
T 1ziw_A 222 TSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYL 301 (680)
T ss_dssp SCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEE
T ss_pred ccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEE
Confidence 46789999999999988888988865 9999999999999887 79999999999999999999999999999999999
Q ss_pred eccCCCCCCCC---CCCc----ccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCC-CCc-ccc---cc
Q 003982 143 SLSDNPNLAPW---PFPN----ELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGS-LPA-SFA---KS 210 (782)
Q Consensus 143 ~Ls~N~l~~~~---~~p~----~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~p~-~~~---~~ 210 (782)
++++|...... .+|. .|..+++|++|++++|++++..+..|..+++|++|++++|.+... ++. .|. ..
T Consensus 302 ~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~ 381 (680)
T 1ziw_A 302 NLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHS 381 (680)
T ss_dssp ECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTS
T ss_pred eccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccC
Confidence 99987654211 1333 688899999999999999999999999999999999999986532 222 222 24
Q ss_pred ccchhhcccccCCCccccccccCCCCCcEEEeecccccCCCC--CCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEE
Q 003982 211 DIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIP--DLSKCESLFDLSLRDNQLTGVVPASVISLPALLNIS 288 (782)
Q Consensus 211 ~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 288 (782)
.++.|++++|.+... ....+..+++|++|+|++|++++.++ .+..+++|++|++++|++++..+..|..+++|+.|+
T Consensus 382 ~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~ 460 (680)
T 1ziw_A 382 PLHILNLTKNKISKI-ESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLM 460 (680)
T ss_dssp CCCEEECTTSCCCEE-CTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEE
T ss_pred cCceEECCCCCCCeE-ChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccch
Confidence 678888888876532 23567788888888888888887544 478888888888888888888888888888888888
Q ss_pred ccCCccc--CCCCCC---CCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCC-----
Q 003982 289 LQNNKLQ--GPYPLF---PSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDG----- 358 (782)
Q Consensus 289 l~~N~l~--~~~~~~---~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 358 (782)
+++|.+. +..|.. +.+|+.|++++|++++++...... ...+......++.+..
T Consensus 461 l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~-----------------l~~L~~L~Ls~N~l~~~~~~~ 523 (680)
T 1ziw_A 461 LRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEG-----------------LEKLEILDLQHNNLARLWKHA 523 (680)
T ss_dssp CTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTT-----------------CTTCCEEECCSSCCGGGGSTT
T ss_pred hccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhcc-----------------ccccCEEeCCCCCccccchhh
Confidence 8888876 344543 356888888888887765332211 1111111122222221
Q ss_pred CC----cccccCCceeEEEccCcccccccCccccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcCCCCCCCC
Q 003982 359 WP----FVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVPDF 434 (782)
Q Consensus 359 ~p----~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~ 434 (782)
+| ..+..+++|++|+|++|+++...+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++.+|..
T Consensus 524 ~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 603 (680)
T 1ziw_A 524 NPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKV 603 (680)
T ss_dssp STTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHH
T ss_pred ccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhH
Confidence 12 23677899999999999999655557999999999999999999777778899999999999999999988842
Q ss_pred ----CCCcceecCCCCCCCCCC
Q 003982 435 ----GSNVKFTVSPGNPFIGTN 452 (782)
Q Consensus 435 ----~~~~~~~~~~~n~~~~~~ 452 (782)
...+....+.+|||.|..
T Consensus 604 ~~~~~~~L~~l~l~~N~~~c~c 625 (680)
T 1ziw_A 604 FGPAFRNLTELDMRFNPFDCTC 625 (680)
T ss_dssp HHHHHTTCSEEECTTCCCCBCC
T ss_pred hcccccccCEEEccCCCcccCC
Confidence 267788899999998853
No 40
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2e-35 Score=349.81 Aligned_cols=339 Identities=18% Similarity=0.219 Sum_probs=283.6
Q ss_pred CCEEEEEeCCCCCCc-----------------ccCcccc--CCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCc-
Q 003982 66 NRVTTISLAKSGLSG-----------------TLSPEIS--SLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNN- 124 (782)
Q Consensus 66 ~~v~~L~l~~~~l~~-----------------~~~~~l~--~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~- 124 (782)
.+++.|+|++|.|+| .+|+.++ ++++|++|+|++|++.+.+| .|.++++|++|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~ 527 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRG 527 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCC
Confidence 479999999999998 4999988 99999999999999999888 79999999999999998
Q ss_pred ccC--CCCC------CCCCCCCCCEEeccCCCCCCCCCCCc--ccCCCcccCeeeccccccCCCCcccccCCCCCcEEEc
Q 003982 125 FTS--VPTG------CFDGLTNLQVLSLSDNPNLAPWPFPN--ELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRL 194 (782)
Q Consensus 125 l~~--~~~~------~~~~l~~L~~L~Ls~N~l~~~~~~p~--~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 194 (782)
+++ +|.. .+..+++|++|+|++|++.. +|. .+.++++|+.|+|++|+++ .+| .|..+++|++|+|
T Consensus 528 lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~---ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~L 602 (876)
T 4ecn_A 528 ISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEE---FPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKL 602 (876)
T ss_dssp SCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCB---CCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEEC
T ss_pred cccccchHHHHhhhhcccccCCccEEEeeCCcCCc---cCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEEC
Confidence 886 5542 34566799999999999995 788 8999999999999999999 567 8999999999999
Q ss_pred ccCcCCCCCCccccc-cc-cchhhcccccCCCccccccccCCC--CCcEEEeecccccCCCCCCC------CCCCCCEEE
Q 003982 195 SYNNFTGSLPASFAK-SD-IQNLWMNDQQLGLSGTLDVLSGMT--QLRQVWLHKNQFTGPIPDLS------KCESLFDLS 264 (782)
Q Consensus 195 s~N~l~~~~p~~~~~-~~-l~~l~l~~~~~~~~~~~~~~~~l~--~L~~L~L~~N~l~~~~~~~~------~l~~L~~L~ 264 (782)
++|+++ .+|..+.. .. |+.|++++|.+. ..+..+..++ +|+.|+|++|++++.+|.+. .+++|+.|+
T Consensus 603 s~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~--~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~ 679 (876)
T 4ecn_A 603 DYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK--YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVT 679 (876)
T ss_dssp CSSCCS-CCCTTSCEECTTCCEEECCSSCCC--SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEE
T ss_pred cCCccc-cchHHHhhccccCCEEECcCCCCC--cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEE
Confidence 999999 89988876 45 999999999987 3334555554 49999999999999776543 456999999
Q ss_pred cCCCcCccCcchhh-cCCCCCCEEEccCCcccCCCCCCCC----------CccEEEccCCcCCCCCCCCCCCCChhhhhH
Q 003982 265 LRDNQLTGVVPASV-ISLPALLNISLQNNKLQGPYPLFPS----------KVQKVSLDHNNFCKNSSDAGKPCDPQVTTL 333 (782)
Q Consensus 265 L~~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~~~~~~----------~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~ 333 (782)
|++|+|+ .+|..+ ..+++|+.|+|++|+|+...+..+. +|+.|+|++|+++.++....
T Consensus 680 Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~~lp~~l~---------- 748 (876)
T 4ecn_A 680 LSYNEIQ-KFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTSLSDDFR---------- 748 (876)
T ss_dssp CCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCCCCCGGGS----------
T ss_pred ccCCcCC-ccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCccchHHhh----------
Confidence 9999999 556554 5899999999999999954444332 89999999999986552111
Q ss_pred HHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccC------cccccccCccccccccCCeEecccccccccC
Q 003982 334 LQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLAN------KLLAGNISPAYANLTSLKNLYLQQNNLTGPI 407 (782)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~ 407 (782)
......+.....+++.+..+|..+..+++|+.|+|++ |++.+.+|..|.++++|+.|+|++|+| +.+
T Consensus 749 ------~~~l~~L~~L~Ls~N~L~~lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~I 821 (876)
T 4ecn_A 749 ------ATTLPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKV 821 (876)
T ss_dssp ------TTTCTTCCEEECCSSCCSSCCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBC
T ss_pred ------hccCCCcCEEEeCCCCCCccchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-Ccc
Confidence 0011223333445556666999999999999999976 889999999999999999999999999 799
Q ss_pred CccCCCCCCCCeEecCCCcCCCCCC
Q 003982 408 PDGLTKLASLQNLDVSNNNLSGKVP 432 (782)
Q Consensus 408 p~~~~~l~~L~~L~ls~N~l~g~~p 432 (782)
|..+. ++|+.|||++|++...-+
T Consensus 822 p~~l~--~~L~~LdLs~N~l~~i~~ 844 (876)
T 4ecn_A 822 DEKLT--PQLYILDIADNPNISIDV 844 (876)
T ss_dssp CSCCC--SSSCEEECCSCTTCEEEC
T ss_pred CHhhc--CCCCEEECCCCCCCccCh
Confidence 99876 699999999999976554
No 41
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.1e-34 Score=337.45 Aligned_cols=346 Identities=18% Similarity=0.161 Sum_probs=274.3
Q ss_pred CCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEec
Q 003982 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSL 144 (782)
Q Consensus 66 ~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 144 (782)
.+++.|+|++|.+++..|.+|.++++|++|+|++|.+++.+| .|.++++|++|+|++|+++.+++..|.++++|++|+|
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 135 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNV 135 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEEC
T ss_pred ccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeC
Confidence 478999999999998888899999999999999999999877 7999999999999999999999888999999999999
Q ss_pred cCCCCCCCCCCCcccCCCcccCeeeccccccCCCCccccc----------------------------------------
Q 003982 145 SDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFD---------------------------------------- 184 (782)
Q Consensus 145 s~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~---------------------------------------- 184 (782)
++|++... .+|..+.++++|++|+|++|++++..+..|.
T Consensus 136 ~~n~l~~~-~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n 214 (606)
T 3vq2_A 136 AHNFIHSC-KLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGN 214 (606)
T ss_dssp CSSCCCCC-CCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred CCCcccce-echHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCC
Confidence 99998752 3688899999999999999988776554332
Q ss_pred --------------------------------------------------------------------------------
Q 003982 185 -------------------------------------------------------------------------------- 184 (782)
Q Consensus 185 -------------------------------------------------------------------------------- 184 (782)
T Consensus 215 ~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~ 294 (606)
T 3vq2_A 215 FNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAG 294 (606)
T ss_dssp CSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEES
T ss_pred ccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecC
Confidence
Q ss_pred ----------CCCCCcEEEcccCcCCCCCCccccc----------------------cccchhhcccccCCCcc-ccccc
Q 003982 185 ----------SFSNLQNLRLSYNNFTGSLPASFAK----------------------SDIQNLWMNDQQLGLSG-TLDVL 231 (782)
Q Consensus 185 ----------~l~~L~~L~Ls~N~l~~~~p~~~~~----------------------~~l~~l~l~~~~~~~~~-~~~~~ 231 (782)
.+++|++|++++|++ +.+|.. .. ..|++|++++|.+...+ ....+
T Consensus 295 ~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp~~-~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~ 372 (606)
T 3vq2_A 295 VSIKYLEDVPKHFKWQSLSIIRCQL-KQFPTL-DLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSD 372 (606)
T ss_dssp CCCCCCCCCCTTCCCSEEEEESCCC-SSCCCC-CCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHH
T ss_pred ccchhhhhccccccCCEEEcccccC-cccccC-CCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhh
Confidence 222444444444444 244421 11 34566666666654332 13457
Q ss_pred cCCCCCcEEEeecccccCCCCCCCCCCCCCEEEcCCCcCccCcc-hhhcCCCCCCEEEccCCcccCCCCCCC---CCccE
Q 003982 232 SGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVP-ASVISLPALLNISLQNNKLQGPYPLFP---SKVQK 307 (782)
Q Consensus 232 ~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~~---~~l~~ 307 (782)
..+++|++|++++|++++.+..+..+++|+.|++++|++++..| ..+..+++|++|++++|++++..|..+ .+|+.
T Consensus 373 ~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 452 (606)
T 3vq2_A 373 LGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNT 452 (606)
T ss_dssp HCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCE
T ss_pred ccCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCE
Confidence 78899999999999999887789999999999999999998877 688999999999999999998877643 57899
Q ss_pred EEccCCcCCCC-CCCCCCCCChhhhhHHHhhcCCCCCccccc-CcCCCCCCCCCCcccccCCceeEEEccCcccccccCc
Q 003982 308 VSLDHNNFCKN-SSDAGKPCDPQVTTLLQIAGDMGYPAILSD-SWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISP 385 (782)
Q Consensus 308 L~l~~N~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~ 385 (782)
|++++|++++. .+. .+.....+.. +..+|...+..|..+..+++|++|+|++|++++.+|.
T Consensus 453 L~l~~n~l~~~~~~~-----------------~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 515 (606)
T 3vq2_A 453 LKMAGNSFKDNTLSN-----------------VFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSS 515 (606)
T ss_dssp EECTTCEEGGGEECS-----------------CCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGG
T ss_pred EECCCCcCCCcchHH-----------------hhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHH
Confidence 99999998761 111 1111122232 2333333445567788999999999999999999999
Q ss_pred cccccccCCeEecccccccccCCccCCCCC-CCCeEecCCCcCCCCCC
Q 003982 386 AYANLTSLKNLYLQQNNLTGPIPDGLTKLA-SLQNLDVSNNNLSGKVP 432 (782)
Q Consensus 386 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~-~L~~L~ls~N~l~g~~p 432 (782)
.|.++++|++|+|++|+|+ .+|..+..++ +|+.|++++|++++..+
T Consensus 516 ~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 516 HYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp GTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred HccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 9999999999999999999 7888899997 59999999999998777
No 42
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.3e-35 Score=338.27 Aligned_cols=187 Identities=26% Similarity=0.400 Sum_probs=164.9
Q ss_pred hcCCCccceeecccceEEEEEE-eCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 658 (782)
.++|++.+.||+|+||+||+|. ..+|+.||+|++.... ....+.+.+|+++|+.++||||+++++++.++...|+||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~ 233 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 233 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc--hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 3689999999999999999995 4679999999997654 345677899999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCC--CcEEEEeecccee
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD--MRAKVADFGLVKN 736 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~--~~~kL~DfG~a~~ 736 (782)
|||+||+|.+++... ...+++.++..+++||+.||+|||+ +||+||||||+|||++.+ +.+||+|||+|+.
T Consensus 234 E~~~gg~L~~~i~~~----~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~ 306 (573)
T 3uto_A 234 EFMSGGELFEKVADE----HNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAH 306 (573)
T ss_dssp ECCCCCBHHHHHTCT----TSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEE
T ss_pred eecCCCcHHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeE
Confidence 999999999988542 2458999999999999999999999 899999999999999854 8999999999998
Q ss_pred cCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 737 APDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 737 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
...... ....+||+.|||||++.+. +++.++||||+||+
T Consensus 307 ~~~~~~--~~~~~GT~~y~APEv~~~~---~y~~~~DiWSlGvi 345 (573)
T 3uto_A 307 LDPKQS--VKVTTGTAEFAAPEVAEGK---PVGYYTDMWSVGVL 345 (573)
T ss_dssp CCTTSE--EEEECSSGGGCCHHHHTTC---CBCHHHHHHHHHHH
T ss_pred ccCCCc--eeeeEECccccCHHHhCCC---CCCcHHHHHHHHHH
Confidence 865442 2345899999999999876 56889999999986
No 43
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=4.5e-35 Score=339.10 Aligned_cols=327 Identities=20% Similarity=0.232 Sum_probs=261.7
Q ss_pred CEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEecc
Q 003982 67 RVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLS 145 (782)
Q Consensus 67 ~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 145 (782)
+++.++++++.+....+..+..+++|++|+|++|.|++.+| .|..+++|++|+|++|.|+++++..|.++++|++|+|+
T Consensus 52 ~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 131 (597)
T 3oja_B 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 131 (597)
T ss_dssp CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEee
Confidence 56889999999986555568899999999999999999888 89999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCc
Q 003982 146 DNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLS 225 (782)
Q Consensus 146 ~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~ 225 (782)
+|++.. ..+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|.+++..+..+ ..|+.|+++.|.+..
T Consensus 132 ~n~l~~--l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l--~~L~~L~l~~n~l~~- 206 (597)
T 3oja_B 132 RNDLSS--LPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLI--PSLFHANVSYNLLST- 206 (597)
T ss_dssp SSCCCC--CCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGC--TTCSEEECCSSCCSE-
T ss_pred CCCCCC--CCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhh--hhhhhhhcccCcccc-
Confidence 999997 344457999999999999999999999999999999999999999995432222 467778888776542
Q ss_pred cccccccCCCCCcEEEeecccccCCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCCC---C
Q 003982 226 GTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLF---P 302 (782)
Q Consensus 226 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~---~ 302 (782)
+...++|+.|++++|.++..++.+. ++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++.+|.. +
T Consensus 207 -----l~~~~~L~~L~ls~n~l~~~~~~~~--~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l 277 (597)
T 3oja_B 207 -----LAIPIAVEELDASHNSINVVRGPVN--VELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKM 277 (597)
T ss_dssp -----EECCTTCSEEECCSSCCCEEECSCC--SCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTC
T ss_pred -----ccCCchhheeeccCCcccccccccC--CCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCc
Confidence 3445788899999998887655432 688999999999886 467888899999999999998876653 4
Q ss_pred CCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccc
Q 003982 303 SKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGN 382 (782)
Q Consensus 303 ~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~ 382 (782)
.+|+.|+|++|.+++++ ..+..+++|+.|+|++|.++ .
T Consensus 278 ~~L~~L~Ls~N~l~~l~-----------------------------------------~~~~~l~~L~~L~Ls~N~l~-~ 315 (597)
T 3oja_B 278 QRLERLYISNNRLVALN-----------------------------------------LYGQPIPTLKVLDLSHNHLL-H 315 (597)
T ss_dssp SSCCEEECTTSCCCEEE-----------------------------------------CSSSCCTTCCEEECCSSCCC-C
T ss_pred cCCCEEECCCCCCCCCC-----------------------------------------cccccCCCCcEEECCCCCCC-c
Confidence 57888888888876543 22344568888889888888 5
Q ss_pred cCccccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcCCCCCC-CCCCCcceecCCCCCCCCCC
Q 003982 383 ISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVP-DFGSNVKFTVSPGNPFIGTN 452 (782)
Q Consensus 383 ~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p-~~~~~~~~~~~~~n~~~~~~ 452 (782)
+|..+..+++|++|+|++|+|++. | +..+++|+.|+|++|++++..+ .+...+....+.+++..|..
T Consensus 316 i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 383 (597)
T 3oja_B 316 VERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKI 383 (597)
T ss_dssp CGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCCCCCT
T ss_pred cCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChhHHHHHHHHhhhccccccccCCc
Confidence 777888888888999998888744 3 6677888888898888876543 22233333445566666643
No 44
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=6e-35 Score=320.36 Aligned_cols=326 Identities=21% Similarity=0.254 Sum_probs=249.1
Q ss_pred CCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEec
Q 003982 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSL 144 (782)
Q Consensus 66 ~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 144 (782)
.+++.++++++.++...+..+..+++|++|+|++|.+++.++ .|.++++|++|+|++|+++.+++..|.++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 367889999999885444457899999999999999999887 8999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCc-ccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCC
Q 003982 145 SDNPNLAPWPFPN-ELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLG 223 (782)
Q Consensus 145 s~N~l~~~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~ 223 (782)
++|++.. +|. .|.++++|++|+|++|++++..+..|..+++|++|++++|++++.-...+ ..++.++++.|.+.
T Consensus 125 ~~n~l~~---l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l--~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 125 ERNDLSS---LPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLI--PSLFHANVSYNLLS 199 (390)
T ss_dssp CSSCCCC---CCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGC--TTCSEEECCSSCCS
T ss_pred CCCccCc---CCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccc--cccceeeccccccc
Confidence 9999987 444 46899999999999999999989999999999999999999984322222 46777777777654
Q ss_pred CccccccccCCCCCcEEEeecccccCCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCCC--
Q 003982 224 LSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLF-- 301 (782)
Q Consensus 224 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-- 301 (782)
. +...++|++|++++|+++..+... .++|+.|++++|++++. ..+..+++|++|++++|++++..|..
T Consensus 200 ~------~~~~~~L~~L~l~~n~l~~~~~~~--~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~ 269 (390)
T 3o6n_A 200 T------LAIPIAVEELDASHNSINVVRGPV--NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFV 269 (390)
T ss_dssp E------EECCSSCSEEECCSSCCCEEECCC--CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred c------cCCCCcceEEECCCCeeeeccccc--cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHcc
Confidence 2 334567888888888887764432 46788888888888853 57788888888888888888766543
Q ss_pred -CCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccc
Q 003982 302 -PSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLA 380 (782)
Q Consensus 302 -~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~ 380 (782)
+.+|+.|++++|++++++ .....+++|++|+|++|+++
T Consensus 270 ~l~~L~~L~L~~n~l~~~~-----------------------------------------~~~~~l~~L~~L~L~~n~l~ 308 (390)
T 3o6n_A 270 KMQRLERLYISNNRLVALN-----------------------------------------LYGQPIPTLKVLDLSHNHLL 308 (390)
T ss_dssp TCSSCCEEECCSSCCCEEE-----------------------------------------CSSSCCTTCCEEECCSSCCC
T ss_pred ccccCCEEECCCCcCcccC-----------------------------------------cccCCCCCCCEEECCCCcce
Confidence 457788888888775433 22334567888888888887
Q ss_pred cccCccccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcCCCCCC-CCCCCcceecCCCCCCCCC
Q 003982 381 GNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVP-DFGSNVKFTVSPGNPFIGT 451 (782)
Q Consensus 381 ~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p-~~~~~~~~~~~~~n~~~~~ 451 (782)
.+|..+..+++|++|+|++|+|+.. | +..+++|+.|++++|++++... .+...+....+.+++..|.
T Consensus 309 -~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~c~ 376 (390)
T 3o6n_A 309 -HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCK 376 (390)
T ss_dssp -CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCSCCC
T ss_pred -ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccchhHHHHHHHHHhhcccccCceec
Confidence 4666777888888888888888743 3 6677888888888888876432 2223333333445555554
No 45
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2e-34 Score=331.70 Aligned_cols=313 Identities=19% Similarity=0.211 Sum_probs=260.6
Q ss_pred CCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCC-CCCCCCCCCCCEEec
Q 003982 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVP-TGCFDGLTNLQVLSL 144 (782)
Q Consensus 66 ~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~L 144 (782)
.+++.|+|++|.+++..|.+|..+++|++|+|++|+|+.+++. .+++|++|+|++|+++.++ +..|.++++|++|+|
T Consensus 76 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L 153 (562)
T 3a79_B 76 SELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGL 153 (562)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEE
T ss_pred CCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEec
Confidence 4799999999999988899999999999999999999976555 8999999999999999987 478999999999999
Q ss_pred cCCCCCCCCCCCcccCCCccc--Ceeecccccc--CCCCcccccCCC---------------------------------
Q 003982 145 SDNPNLAPWPFPNELTKSTSL--TTLYMDNANI--FGLIPDFFDSFS--------------------------------- 187 (782)
Q Consensus 145 s~N~l~~~~~~p~~~~~l~~L--~~L~L~~N~l--~~~~~~~~~~l~--------------------------------- 187 (782)
++|++.. ..+..+++| +.|+|++|.+ ++..|..+..+.
T Consensus 154 ~~n~l~~-----~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l 228 (562)
T 3a79_B 154 SAAKFRQ-----LDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNI 228 (562)
T ss_dssp ECSBCCT-----TTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEE
T ss_pred CCCcccc-----CchhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecc
Confidence 9999877 244555555 9999999999 777777776544
Q ss_pred ------------------------------------------------CCcEEEcccCcCCCCCCccccc----------
Q 003982 188 ------------------------------------------------NLQNLRLSYNNFTGSLPASFAK---------- 209 (782)
Q Consensus 188 ------------------------------------------------~L~~L~Ls~N~l~~~~p~~~~~---------- 209 (782)
+|++|++++|+++|.+|..+..
T Consensus 229 ~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~ 308 (562)
T 3a79_B 229 KLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLM 308 (562)
T ss_dssp ECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEE
T ss_pred cccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchhee
Confidence 7888888888888888876621
Q ss_pred ----------------------cccchhhcccccCCCccccccccCCCCCcEEEeecccccCCCC-CCCCCCCCCEEEcC
Q 003982 210 ----------------------SDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIP-DLSKCESLFDLSLR 266 (782)
Q Consensus 210 ----------------------~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~ 266 (782)
.+++.|++++|.+.... ....+++|++|++++|++++..+ .+..+++|+.|+|+
T Consensus 309 ~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~---~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 385 (562)
T 3a79_B 309 IEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMV---CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQ 385 (562)
T ss_dssp EEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCC---CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECC
T ss_pred hhhcccceeecChhhhhhhhccCcceEEEccCCCccccc---CccCCCCceEEECCCCccccchhhhhcccCCCCEEECC
Confidence 23555566666543211 12678999999999999999555 68999999999999
Q ss_pred CCcCccC--cchhhcCCCCCCEEEccCCcccCCCCC----CCCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCC
Q 003982 267 DNQLTGV--VPASVISLPALLNISLQNNKLQGPYPL----FPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDM 340 (782)
Q Consensus 267 ~N~l~~~--~p~~~~~l~~L~~L~l~~N~l~~~~~~----~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (782)
+|++++. +|..|.++++|++|++++|++++.+|. .+.+|+.|++++|++++..
T Consensus 386 ~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~--------------------- 444 (562)
T 3a79_B 386 RNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSV--------------------- 444 (562)
T ss_dssp SSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGG---------------------
T ss_pred CCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcch---------------------
Confidence 9999973 467899999999999999999985553 2468999999999986422
Q ss_pred CCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccccccCCcc-CCCCCCCCe
Q 003982 341 GYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDG-LTKLASLQN 419 (782)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~ 419 (782)
|..+. ++|++|+|++|+|+ .+|..+.++++|++|+|++|+|+ .+|.. |..+++|+.
T Consensus 445 -------------------~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~ 501 (562)
T 3a79_B 445 -------------------FRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQY 501 (562)
T ss_dssp -------------------GSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCC
T ss_pred -------------------hhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCE
Confidence 11111 58999999999999 68888889999999999999999 56666 999999999
Q ss_pred EecCCCcCCCCCC
Q 003982 420 LDVSNNNLSGKVP 432 (782)
Q Consensus 420 L~ls~N~l~g~~p 432 (782)
|++++|++++..|
T Consensus 502 L~l~~N~~~c~c~ 514 (562)
T 3a79_B 502 IWLHDNPWDCTCP 514 (562)
T ss_dssp EECCSCCBCCCHH
T ss_pred EEecCCCcCCCcc
Confidence 9999999999877
No 46
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.6e-34 Score=327.80 Aligned_cols=316 Identities=16% Similarity=0.214 Sum_probs=234.8
Q ss_pred CCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCC-CCCCCCCCCCCEEec
Q 003982 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVP-TGCFDGLTNLQVLSL 144 (782)
Q Consensus 66 ~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~L 144 (782)
.+++.|+|++|.+++..|..|..+++|++|+|++|+|+++++. .+++|++|+|++|++++++ +..|+++++|++|+|
T Consensus 45 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L 122 (520)
T 2z7x_B 45 SKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGL 122 (520)
T ss_dssp TTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEE
T ss_pred ccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEe
Confidence 5799999999999988899999999999999999999976555 8999999999999999864 467999999999999
Q ss_pred cCCCCCCCCCCCcccCCCccc--Ceeecccccc--CCCCcccccCCC---------------------------------
Q 003982 145 SDNPNLAPWPFPNELTKSTSL--TTLYMDNANI--FGLIPDFFDSFS--------------------------------- 187 (782)
Q Consensus 145 s~N~l~~~~~~p~~~~~l~~L--~~L~L~~N~l--~~~~~~~~~~l~--------------------------------- 187 (782)
++|++.. ..+..+++| +.|++++|.+ .+..|..+..+.
T Consensus 123 ~~n~l~~-----~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l 197 (520)
T 2z7x_B 123 STTHLEK-----SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNI 197 (520)
T ss_dssp EESSCCG-----GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCE
T ss_pred cCcccch-----hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccc
Confidence 9999876 467778888 9999999999 777777766643
Q ss_pred --------------------------------------------------CCcEEEcccCcCCCCCCccc-----cc-cc
Q 003982 188 --------------------------------------------------NLQNLRLSYNNFTGSLPASF-----AK-SD 211 (782)
Q Consensus 188 --------------------------------------------------~L~~L~Ls~N~l~~~~p~~~-----~~-~~ 211 (782)
+|++|++++|+++|.+|..+ .. ..
T Consensus 198 ~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~ 277 (520)
T 2z7x_B 198 KCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKA 277 (520)
T ss_dssp EECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCE
T ss_pred cccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCce
Confidence 67777777788877777766 22 33
Q ss_pred cchhhcccccCCCcc-----------------------ccccccCCCCCcEEEeecccccCCCC-CCCCCCCCCEEEcCC
Q 003982 212 IQNLWMNDQQLGLSG-----------------------TLDVLSGMTQLRQVWLHKNQFTGPIP-DLSKCESLFDLSLRD 267 (782)
Q Consensus 212 l~~l~l~~~~~~~~~-----------------------~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~ 267 (782)
|+.+++..|.+.... ....+..+++|++|++++|++++..+ .+..+++|+.|+|++
T Consensus 278 L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 357 (520)
T 2z7x_B 278 LSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQM 357 (520)
T ss_dssp EEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCS
T ss_pred eEeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccC
Confidence 444444444431110 00011455666666666666666333 456666666666666
Q ss_pred CcCcc--CcchhhcCCCCCCEEEccCCcccCCCCC----CCCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCC
Q 003982 268 NQLTG--VVPASVISLPALLNISLQNNKLQGPYPL----FPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMG 341 (782)
Q Consensus 268 N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~~~----~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (782)
|++++ .+|..+..+++|++|++++|++++.+|. .+.+|+.|++++|++++
T Consensus 358 N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~------------------------ 413 (520)
T 2z7x_B 358 NQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTD------------------------ 413 (520)
T ss_dssp SCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCG------------------------
T ss_pred CccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCc------------------------
Confidence 66664 3445566666666666666666653332 23456666666665543
Q ss_pred CCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccccccCCcc-CCCCCCCCeE
Q 003982 342 YPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDG-LTKLASLQNL 420 (782)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L 420 (782)
.+|..+. ++|++|+|++|+|+ .+|..+.++++|++|+|++|+|+ .+|.. |..+++|+.|
T Consensus 414 ----------------~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L 473 (520)
T 2z7x_B 414 ----------------TIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKI 473 (520)
T ss_dssp ----------------GGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEE
T ss_pred ----------------chhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEE
Confidence 2222222 68999999999999 79998889999999999999999 56665 9999999999
Q ss_pred ecCCCcCCCCCC
Q 003982 421 DVSNNNLSGKVP 432 (782)
Q Consensus 421 ~ls~N~l~g~~p 432 (782)
++++|++++..+
T Consensus 474 ~l~~N~~~c~c~ 485 (520)
T 2z7x_B 474 WLHTNPWDCSCP 485 (520)
T ss_dssp ECCSSCBCCCHH
T ss_pred ECcCCCCcccCC
Confidence 999999998776
No 47
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.8e-34 Score=331.57 Aligned_cols=350 Identities=18% Similarity=0.167 Sum_probs=277.6
Q ss_pred CCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEec
Q 003982 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSL 144 (782)
Q Consensus 66 ~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 144 (782)
.+++.|+|++|++++..+..|.++++|++|+|++|.+++.+| .|.++++|++|+|++|+++.++...|.++++|++|+|
T Consensus 52 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 131 (570)
T 2z63_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (570)
T ss_dssp SSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEEC
T ss_pred CCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEec
Confidence 479999999999998888889999999999999999999887 7999999999999999999999888999999999999
Q ss_pred cCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCC----cEEEcccCcCCCCCCccccc-----------
Q 003982 145 SDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNL----QNLRLSYNNFTGSLPASFAK----------- 209 (782)
Q Consensus 145 s~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L----~~L~Ls~N~l~~~~p~~~~~----------- 209 (782)
++|++... .+|..+.++++|++|++++|++++..+..+..+++| +.|++++|.+++..|..+..
T Consensus 132 ~~n~l~~~-~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n 210 (570)
T 2z63_A 132 AHNLIQSF-KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNN 210 (570)
T ss_dssp CSSCCCCC-CCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred CCCcccee-cChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccCcceeEecccc
Confidence 99998862 368899999999999999999998877777766666 67777777665433332221
Q ss_pred -----------------------------------------------------------------------cccchhhc-
Q 003982 210 -----------------------------------------------------------------------SDIQNLWM- 217 (782)
Q Consensus 210 -----------------------------------------------------------------------~~l~~l~l- 217 (782)
..++.|++
T Consensus 211 ~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~ 290 (570)
T 2z63_A 211 FDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLV 290 (570)
T ss_dssp CSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEE
T ss_pred cccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEec
Confidence 12222233
Q ss_pred ---------------------ccccCCCcccc------------------ccccCCCCCcEEEeecccccCCC---CCCC
Q 003982 218 ---------------------NDQQLGLSGTL------------------DVLSGMTQLRQVWLHKNQFTGPI---PDLS 255 (782)
Q Consensus 218 ---------------------~~~~~~~~~~~------------------~~~~~l~~L~~L~L~~N~l~~~~---~~~~ 255 (782)
.+|.+...... .....+++|++|++++|++++.. ..+.
T Consensus 291 ~~~l~~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~ 370 (570)
T 2z63_A 291 SVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDF 370 (570)
T ss_dssp SCEECSCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCSSCCBEEEEEEHHHH
T ss_pred CccchhhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCCCCEEeCcCCccCcccccccccc
Confidence 22222200000 00145778888888888888753 3477
Q ss_pred CCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCC----CCCCccEEEccCCcCCCCCCCCCCCCChhhh
Q 003982 256 KCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPL----FPSKVQKVSLDHNNFCKNSSDAGKPCDPQVT 331 (782)
Q Consensus 256 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~----~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~ 331 (782)
.+++|++|++++|++++..+. +..+++|++|++++|++.+..|. .+.+|+.|++++|.+.+......
T Consensus 371 ~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-------- 441 (570)
T 2z63_A 371 GTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIF-------- 441 (570)
T ss_dssp TCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTT--------
T ss_pred ccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhh--------
Confidence 899999999999999965554 99999999999999999987662 34689999999999877542221
Q ss_pred hHHHhhcCCCCCcccccCcCCCCCC--CCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccccccCCc
Q 003982 332 TLLQIAGDMGYPAILSDSWEGNNAC--DGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPD 409 (782)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 409 (782)
.....+......++.+ +.+|..+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|.
T Consensus 442 ---------~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 512 (570)
T 2z63_A 442 ---------NGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDG 512 (570)
T ss_dssp ---------TTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred ---------hcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHH
Confidence 1112222223333333 36888899999999999999999999999999999999999999999999889
Q ss_pred cCCCCCCCCeEecCCCcCCCCCCCC
Q 003982 410 GLTKLASLQNLDVSNNNLSGKVPDF 434 (782)
Q Consensus 410 ~~~~l~~L~~L~ls~N~l~g~~p~~ 434 (782)
.|..+++|+.|++++|+++|.+|..
T Consensus 513 ~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 513 IFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp TTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred HhhcccCCcEEEecCCcccCCCcch
Confidence 9999999999999999999999853
No 48
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.2e-34 Score=330.84 Aligned_cols=340 Identities=18% Similarity=0.201 Sum_probs=261.4
Q ss_pred CCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCC-CCCCCCCCCCCEEe
Q 003982 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVP-TGCFDGLTNLQVLS 143 (782)
Q Consensus 66 ~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~ 143 (782)
.++++|+|++|.+++..|.+|..+++|++|+|++|++++.+| .|.++++|++|+|++|+++.++ +..|.++++|++|+
T Consensus 50 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 129 (549)
T 2z81_A 50 ANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLR 129 (549)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEE
T ss_pred CcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEE
Confidence 479999999999998888899999999999999999999888 4999999999999999999764 45789999999999
Q ss_pred ccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccC------------------------CCCCcEEEcccCcC
Q 003982 144 LSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDS------------------------FSNLQNLRLSYNNF 199 (782)
Q Consensus 144 Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~------------------------l~~L~~L~Ls~N~l 199 (782)
+++|++... ..+..+.++++|++|++++|++++..|..+.. +++|++|++++|++
T Consensus 130 L~~n~~~~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l 208 (549)
T 2z81_A 130 IGNVETFSE-IRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNL 208 (549)
T ss_dssp EEESSSCCE-ECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBC
T ss_pred CCCCccccc-cCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCcc
Confidence 999984441 22357889999999999999999887777655 55666777777777
Q ss_pred CCCC--Ccccc--ccc----------------------------------------------------------------
Q 003982 200 TGSL--PASFA--KSD---------------------------------------------------------------- 211 (782)
Q Consensus 200 ~~~~--p~~~~--~~~---------------------------------------------------------------- 211 (782)
++.. |..+. ...
T Consensus 209 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l 288 (549)
T 2z81_A 209 ARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTI 288 (549)
T ss_dssp TTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEE
T ss_pred ccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccc
Confidence 6421 11100 011
Q ss_pred -----------------------cchhhcccccCCCccccccccCCCCCcEEEeecccccCCCC----CCCCCCCCCEEE
Q 003982 212 -----------------------IQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIP----DLSKCESLFDLS 264 (782)
Q Consensus 212 -----------------------l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~----~~~~l~~L~~L~ 264 (782)
++.+++++|.+.. .....+.++++|++|+|++|++++..+ .+..+++|++|+
T Consensus 289 ~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~-ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~ 367 (549)
T 2z81_A 289 RRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFL-VPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLV 367 (549)
T ss_dssp ESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCC-CCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEE
T ss_pred cccccchhhhcccchhhhhhcccceEEEeccCcccc-CCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEE
Confidence 1122222222110 000112468999999999999998542 378899999999
Q ss_pred cCCCcCccCcc--hhhcCCCCCCEEEccCCcccCCCCC--CCCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCC
Q 003982 265 LRDNQLTGVVP--ASVISLPALLNISLQNNKLQGPYPL--FPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDM 340 (782)
Q Consensus 265 L~~N~l~~~~p--~~~~~l~~L~~L~l~~N~l~~~~~~--~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (782)
|++|+|++..+ ..+..+++|++|++++|++++.++. .+.+|+.|++++|+++.++....
T Consensus 368 Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~----------------- 430 (549)
T 2z81_A 368 LSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGIRVVKTCIP----------------- 430 (549)
T ss_dssp CTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCCCCSCCCCCTTCCEEECTTSCCSCCCTTSC-----------------
T ss_pred ccCCcccccccchhhhhcCCCCCEEECCCCCCccCChhhcccccccEEECCCCCcccccchhc-----------------
Confidence 99999996543 5689999999999999999954332 34689999999999987653211
Q ss_pred CCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccccccCCccCCCCCCCCeE
Q 003982 341 GYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNL 420 (782)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 420 (782)
..+.....+++.+..++ ..+++|++|+|++|+|+ .+|. ...+++|++|+|++|++++.+|..|..+++|+.|
T Consensus 431 ---~~L~~L~Ls~N~l~~~~---~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 502 (549)
T 2z81_A 431 ---QTLEVLDVSNNNLDSFS---LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKI 502 (549)
T ss_dssp ---TTCSEEECCSSCCSCCC---CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEE
T ss_pred ---CCceEEECCCCChhhhc---ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEE
Confidence 12222233444444443 56789999999999999 6776 5789999999999999999999999999999999
Q ss_pred ecCCCcCCCCCC
Q 003982 421 DVSNNNLSGKVP 432 (782)
Q Consensus 421 ~ls~N~l~g~~p 432 (782)
++++|++++.+|
T Consensus 503 ~l~~N~~~~~~~ 514 (549)
T 2z81_A 503 WLHTNPWDCSCP 514 (549)
T ss_dssp ECCSSCBCCCHH
T ss_pred EecCCCccCCCc
Confidence 999999999888
No 49
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.2e-32 Score=307.16 Aligned_cols=303 Identities=19% Similarity=0.180 Sum_probs=252.9
Q ss_pred CCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEecc
Q 003982 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLS 145 (782)
Q Consensus 66 ~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 145 (782)
.+++.|++++|++++. | .+..+++|++|+|++|+|++.+ +..+++|++|+|++|+|++++ +.++++|++|+|+
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~~--~~~l~~L~~L~Ls~N~l~~~~---~~~l~~L~~L~L~ 114 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTLD--LSQNTNLTYLACDSNKLTNLD---VTPLTKLTYLNCD 114 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECC
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeEc--cccCCCCCEEECcCCCCceee---cCCCCcCCEEECC
Confidence 4689999999999974 5 7999999999999999999863 889999999999999999985 8899999999999
Q ss_pred CCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccc-cccchhhcccccCCC
Q 003982 146 DNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAK-SDIQNLWMNDQQLGL 224 (782)
Q Consensus 146 ~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~l~l~~~~~~~ 224 (782)
+|++.. +| +..+++|++|++++|++++. .++.+++|++|++++|+..+.++ +.. ..|+.|++++|.+..
T Consensus 115 ~N~l~~---l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~~--~~~l~~L~~L~ls~n~l~~ 184 (457)
T 3bz5_A 115 TNKLTK---LD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNKITE 184 (457)
T ss_dssp SSCCSC---CC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCCC--CTTCTTCCEEECCSSCCCC
T ss_pred CCcCCe---ec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCcccccc--cccCCcCCEEECCCCccce
Confidence 999988 34 88999999999999999996 38899999999999997666663 322 578889999888765
Q ss_pred ccccccccCCCCCcEEEeecccccCCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCCCCCC
Q 003982 225 SGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPSK 304 (782)
Q Consensus 225 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 304 (782)
. + ++.+++|+.|++++|++++. .+..+++|+.|++++|+|++ +| +..+++|+.|++++|++++..+..+++
T Consensus 185 l---~-l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~ 255 (457)
T 3bz5_A 185 L---D-VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSK 255 (457)
T ss_dssp C---C-CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTT
T ss_pred e---c-cccCCCCCEEECcCCcCCee--ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCC
Confidence 2 2 77889999999999999886 48888999999999999997 56 888999999999999999887777888
Q ss_pred ccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccC
Q 003982 305 VQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNIS 384 (782)
Q Consensus 305 l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p 384 (782)
|+.|++++|++..+. ...|...+.+| ...+++|+.|+|++|.+.+.+|
T Consensus 256 L~~L~l~~n~L~~L~------------------------------l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~ 303 (457)
T 3bz5_A 256 LTTLHCIQTDLLEID------------------------------LTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLD 303 (457)
T ss_dssp CCEEECTTCCCSCCC------------------------------CTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEE
T ss_pred CCEEeccCCCCCEEE------------------------------CCCCccCCccc--ccccccCCEEECCCCcccceec
Confidence 999999888876554 22233344444 3456788899999988877776
Q ss_pred c--------cccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcCCC
Q 003982 385 P--------AYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSG 429 (782)
Q Consensus 385 ~--------~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g 429 (782)
. .+.++++|++|+|++|+|++. + ++.+++|+.||+++|+|+|
T Consensus 304 ~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 304 CQAAGITELDLSQNPKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp CTTCCCSCCCCTTCTTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB
T ss_pred cCCCcceEechhhcccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC
Confidence 4 355667889999999999874 3 8889999999999999987
No 50
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.3e-32 Score=308.95 Aligned_cols=340 Identities=23% Similarity=0.335 Sum_probs=241.4
Q ss_pred CEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccC
Q 003982 67 RVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSD 146 (782)
Q Consensus 67 ~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 146 (782)
+++.|++.++++.. +| .+..+++|++|+|++|.+++.++ +.++++|++|+|++|+++++++ +.++++|++|+|++
T Consensus 47 ~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~ 121 (466)
T 1o6v_A 47 QVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFN 121 (466)
T ss_dssp TCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred cccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh-hhccccCCEEECCCCccccChh--hcCCCCCCEEECCC
Confidence 57788888888773 44 37778888888888888887766 7888888888888888888776 78888888888888
Q ss_pred CCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccc-cccchhhcccccCCCc
Q 003982 147 NPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAK-SDIQNLWMNDQQLGLS 225 (782)
Q Consensus 147 N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~l~l~~~~~~~~ 225 (782)
|++.. ++. +.++++|++|++++|.+++. + .+..+++|++|+++ |.+.+ ++. +.. ..|+.|++++|.+...
T Consensus 122 n~l~~---~~~-~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~-~~~-~~~l~~L~~L~l~~n~l~~~ 192 (466)
T 1o6v_A 122 NQITD---IDP-LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTD-LKP-LANLTTLERLDISSNKVSDI 192 (466)
T ss_dssp SCCCC---CGG-GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCC-CGG-GTTCTTCCEEECCSSCCCCC
T ss_pred CCCCC---ChH-HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccC-chh-hccCCCCCEEECcCCcCCCC
Confidence 88777 333 77888888888888888775 2 36777777777775 44442 222 322 4677777777765432
Q ss_pred cccccccCCCCCcEEEeecccccCCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCC-CCCC
Q 003982 226 GTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPL-FPSK 304 (782)
Q Consensus 226 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~ 304 (782)
+.+..+++|++|++++|++++..+ +..+++|+.|++++|++++. ..+..+++|+.|++++|++++..+. .+.+
T Consensus 193 ---~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~ 266 (466)
T 1o6v_A 193 ---SVLAKLTNLESLIATNNQISDITP-LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLSGLTK 266 (466)
T ss_dssp ---GGGGGCTTCSEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTT
T ss_pred ---hhhccCCCCCEEEecCCccccccc-ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchhhhcCCC
Confidence 346667777777777777776554 66677777777777777743 3566777777777777777765542 3456
Q ss_pred ccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccC
Q 003982 305 VQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNIS 384 (782)
Q Consensus 305 l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p 384 (782)
|+.|++++|.++++.. +.....+......++.+..++. +..+++|+.|+|++|.+++..|
T Consensus 267 L~~L~l~~n~l~~~~~-------------------~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~ 326 (466)
T 1o6v_A 267 LTELKLGANQISNISP-------------------LAGLTALTNLELNENQLEDISP-ISNLKNLTYLTLYFNNISDISP 326 (466)
T ss_dssp CSEEECCSSCCCCCGG-------------------GTTCTTCSEEECCSSCCSCCGG-GGGCTTCSEEECCSSCCSCCGG
T ss_pred CCEEECCCCccCcccc-------------------ccCCCccCeEEcCCCcccCchh-hcCCCCCCEEECcCCcCCCchh
Confidence 7777777777765441 0011112222223334444444 6778899999999999998766
Q ss_pred ccccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcCCCCCC-CCCCCcceecCCCCCCCC
Q 003982 385 PAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVP-DFGSNVKFTVSPGNPFIG 450 (782)
Q Consensus 385 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p-~~~~~~~~~~~~~n~~~~ 450 (782)
+..+++|++|++++|++++. ..+..+++|+.|++++|++++.+| .-...+....+.+|++.+
T Consensus 327 --~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 327 --VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp --GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGGGTTCTTCCEEECCCEEEEC
T ss_pred --hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccchhhcCCCCCEEeccCCcccC
Confidence 78899999999999999865 468899999999999999999888 112566777788888764
No 51
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=7.5e-34 Score=303.17 Aligned_cols=276 Identities=14% Similarity=0.201 Sum_probs=147.8
Q ss_pred ccchhHHHHHHHHHhcCCCCCCCC--C----CCCCCCccccceEeCC---------CCCEEEEEeCCCCCCcccCccccC
Q 003982 24 SLGDDGSVMLKLAQSLQNLPSDWS--S----TSSTGYCEWTGINCDN---------SNRVTTISLAKSGLSGTLSPEISS 88 (782)
Q Consensus 24 ~~~~~~~~l~~~~~~~~~~~~~w~--~----~~~~~~c~w~gv~c~~---------~~~v~~L~l~~~~l~~~~~~~l~~ 88 (782)
+..++++||++||+++..++..|. | ....++|.|.|+.|+. ..+|+.|+|++|+++ .+|+.++.
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~ 102 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFR 102 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGG
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhhh
Confidence 456899999999999866665542 2 2357889999999953 234555555555554 44444444
Q ss_pred CccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCee
Q 003982 89 LTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTL 168 (782)
Q Consensus 89 l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L 168 (782)
+++|++|+|++|.++.++..+.++++|++|+|++|+++.+ |..+.++++|++|
T Consensus 103 l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~~l---------------------------p~~l~~l~~L~~L 155 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLRAL---------------------------PASIASLNRLREL 155 (328)
T ss_dssp GTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCCCC---------------------------CGGGGGCTTCCEE
T ss_pred CCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccccC---------------------------cHHHhcCcCCCEE
Confidence 5555555555554442222344444444444444444332 2333333333333
Q ss_pred eccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeeccccc
Q 003982 169 YMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFT 248 (782)
Q Consensus 169 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 248 (782)
+|++|++.+.+|..+.. .. ....+.++++|++|+|++|+++
T Consensus 156 ~L~~n~~~~~~p~~~~~------------------------~~---------------~~~~~~~l~~L~~L~L~~n~l~ 196 (328)
T 4fcg_A 156 SIRACPELTELPEPLAS------------------------TD---------------ASGEHQGLVNLQSLRLEWTGIR 196 (328)
T ss_dssp EEEEETTCCCCCSCSEE------------------------EC----------------CCCEEESTTCCEEEEEEECCC
T ss_pred ECCCCCCccccChhHhh------------------------cc---------------chhhhccCCCCCEEECcCCCcC
Confidence 33333333333322221 00 0011233445555555555555
Q ss_pred CCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCCCCCCccEEEccCCcCCCCCCCCCCCCCh
Q 003982 249 GPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDP 328 (782)
Q Consensus 249 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~~ 328 (782)
..+..+..+++|++|+|++|++++ +|..+..+++|++|++++|++.+.+|.
T Consensus 197 ~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~---------------------------- 247 (328)
T 4fcg_A 197 SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPP---------------------------- 247 (328)
T ss_dssp CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCC----------------------------
T ss_pred cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHH----------------------------
Confidence 333334455555555555555552 344455555555555555555433322
Q ss_pred hhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccccccCC
Q 003982 329 QVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIP 408 (782)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p 408 (782)
.+..+++|++|+|++|.+.+.+|..+.++++|++|+|++|++.+.+|
T Consensus 248 ---------------------------------~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP 294 (328)
T 4fcg_A 248 ---------------------------------IFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLP 294 (328)
T ss_dssp ---------------------------------CTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCC
T ss_pred ---------------------------------HhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhcc
Confidence 22233455555555555555666677777777777777777777777
Q ss_pred ccCCCCCCCCeEecCCCcCC
Q 003982 409 DGLTKLASLQNLDVSNNNLS 428 (782)
Q Consensus 409 ~~~~~l~~L~~L~ls~N~l~ 428 (782)
+.++++++|+.+++..|.+.
T Consensus 295 ~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 295 SLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp GGGGGSCTTCEEECCGGGSC
T ss_pred HHHhhccCceEEeCCHHHHH
Confidence 77777777777777766554
No 52
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.8e-32 Score=295.75 Aligned_cols=301 Identities=23% Similarity=0.343 Sum_probs=193.6
Q ss_pred CCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEecc
Q 003982 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLS 145 (782)
Q Consensus 66 ~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 145 (782)
.+++.|+++++++.. ++ .+..+++|++|++++|++++.++ +..+++|++|+|++|+++.++ .+.++++|++|+++
T Consensus 44 ~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~-~~~l~~L~~L~L~~n~i~~~~--~~~~l~~L~~L~l~ 118 (347)
T 4fmz_A 44 ESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP-LSNLVKLTNLYIGTNKITDIS--ALQNLTNLRELYLN 118 (347)
T ss_dssp TTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCG--GGTTCTTCSEEECT
T ss_pred ccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchh-hhcCCcCCEEEccCCcccCch--HHcCCCcCCEEECc
Confidence 468899999999984 44 48999999999999999998766 999999999999999999975 48999999999999
Q ss_pred CCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccc-cccchhhcccccCCC
Q 003982 146 DNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAK-SDIQNLWMNDQQLGL 224 (782)
Q Consensus 146 ~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~l~l~~~~~~~ 224 (782)
+|++.. ++. +..+++|+.|++++|.....++. +..+++|++|++++|.+.+ ++. +.. ..|+.|++++|.+..
T Consensus 119 ~n~i~~---~~~-~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~-~~~-~~~l~~L~~L~l~~n~l~~ 191 (347)
T 4fmz_A 119 EDNISD---ISP-LANLTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKD-VTP-IANLTDLYSLSLNYNQIED 191 (347)
T ss_dssp TSCCCC---CGG-GTTCTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCSEEECTTSCCCC
T ss_pred CCcccC---chh-hccCCceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCC-chh-hccCCCCCEEEccCCcccc
Confidence 999988 344 88999999999999976665444 8999999999999999983 333 322 345555555554432
Q ss_pred ccccccccCCCCCcEEEeecccccCCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCC-CCCC
Q 003982 225 SGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYP-LFPS 303 (782)
Q Consensus 225 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~ 303 (782)
.. .+..+++|+.|++++|++++..+ +..+++|++|++++|++++..+ +..+++|++|++++|++++... ..+.
T Consensus 192 ~~---~~~~l~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~ 265 (347)
T 4fmz_A 192 IS---PLASLTSLHYFTAYVNQITDITP-VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDINAVKDLT 265 (347)
T ss_dssp CG---GGGGCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGGGTTCT
T ss_pred cc---cccCCCccceeecccCCCCCCch-hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCChhHhcCC
Confidence 11 14445555555555555554333 4445555555555555553322 4555555555555555554211 1233
Q ss_pred CccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCccccccc
Q 003982 304 KVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNI 383 (782)
Q Consensus 304 ~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~ 383 (782)
+|+.|++++|+++++. .+..+++|+.|++++|.+++..
T Consensus 266 ~L~~L~l~~n~l~~~~------------------------------------------~~~~l~~L~~L~L~~n~l~~~~ 303 (347)
T 4fmz_A 266 KLKMLNVGSNQISDIS------------------------------------------VLNNLSQLNSLFLNNNQLGNED 303 (347)
T ss_dssp TCCEEECCSSCCCCCG------------------------------------------GGGGCTTCSEEECCSSCCCGGG
T ss_pred CcCEEEccCCccCCCh------------------------------------------hhcCCCCCCEEECcCCcCCCcC
Confidence 4555555555443221 1233445555555555555555
Q ss_pred CccccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcCC
Q 003982 384 SPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLS 428 (782)
Q Consensus 384 p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 428 (782)
|..|.++++|++|+|++|++++..| +..+++|+.|++++|+|+
T Consensus 304 ~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 304 MEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp HHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred hhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 5555555555555555555554444 455555555555555553
No 53
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.1e-32 Score=295.25 Aligned_cols=298 Identities=20% Similarity=0.300 Sum_probs=209.9
Q ss_pred CCCCCC-CCCCCCCccccceEeCCCCCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEe
Q 003982 42 LPSDWS-STSSTGYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIY 119 (782)
Q Consensus 42 ~~~~w~-~~~~~~~c~w~gv~c~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~ 119 (782)
.|..|. .++..+.|.|+.+.| ++++++ .+|..+. ++|++|+|++|.+++.++ .|.++++|++|+
T Consensus 19 lp~~~~~~cp~~c~c~l~~l~~-----------~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 84 (332)
T 2ft3_A 19 LPPTYSAMCPFGCHCHLRVVQC-----------SDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALV 84 (332)
T ss_dssp ------CCCCSSCEEETTEEEC-----------CSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCcccCCCCCCCcccCCEEEC-----------CCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEE
Confidence 444443 233334466655555 455665 5666553 688999999999988877 788899999999
Q ss_pred CCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcC
Q 003982 120 LDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNF 199 (782)
Q Consensus 120 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 199 (782)
|++|+++.+++..|.++++|++|+|++|++.. +|..+. ++|++|++++|++++..+..|..+++|++|++++|.+
T Consensus 85 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~---l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l 159 (332)
T 2ft3_A 85 LVNNKISKIHEKAFSPLRKLQKLYISKNHLVE---IPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPL 159 (332)
T ss_dssp CCSSCCCEECGGGSTTCTTCCEEECCSSCCCS---CCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCC
T ss_pred CCCCccCccCHhHhhCcCCCCEEECCCCcCCc---cCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCcc
Confidence 99999998888888899999999999998886 555554 7899999999999888788888999999999999988
Q ss_pred CC--CCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccccCCCCCCCCCCCCCEEEcCCCcCccCcchh
Q 003982 200 TG--SLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPAS 277 (782)
Q Consensus 200 ~~--~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 277 (782)
+. ..|..+. .+ +|++|++++|++++.+..+. ++|+.|++++|++++..+..
T Consensus 160 ~~~~~~~~~~~------------------------~l-~L~~L~l~~n~l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~ 212 (332)
T 2ft3_A 160 ENSGFEPGAFD------------------------GL-KLNYLRISEAKLTGIPKDLP--ETLNELHLDHNKIQAIELED 212 (332)
T ss_dssp BGGGSCTTSSC------------------------SC-CCSCCBCCSSBCSSCCSSSC--SSCSCCBCCSSCCCCCCTTS
T ss_pred ccCCCCccccc------------------------CC-ccCEEECcCCCCCccCcccc--CCCCEEECCCCcCCccCHHH
Confidence 62 4444433 34 67777777777776554433 56777777777777666677
Q ss_pred hcCCCCCCEEEccCCcccCCCCCC---CCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCC
Q 003982 278 VISLPALLNISLQNNKLQGPYPLF---PSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNN 354 (782)
Q Consensus 278 ~~~l~~L~~L~l~~N~l~~~~~~~---~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (782)
|..+++|+.|++++|++++..+.. +.+|+.|++++|+++.
T Consensus 213 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~------------------------------------- 255 (332)
T 2ft3_A 213 LLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSR------------------------------------- 255 (332)
T ss_dssp STTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCB-------------------------------------
T ss_pred hcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCee-------------------------------------
Confidence 777777777777777777655532 3456666666665532
Q ss_pred CCCCCCcccccCCceeEEEccCcccccccCcccccc------ccCCeEeccccccc--ccCCccCCCCCCCCeEecCCCc
Q 003982 355 ACDGWPFVTCSQGRIITINLANKLLAGNISPAYANL------TSLKNLYLQQNNLT--GPIPDGLTKLASLQNLDVSNNN 426 (782)
Q Consensus 355 ~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~Ls~N~l~--g~~p~~~~~l~~L~~L~ls~N~ 426 (782)
+|..+..+++|+.|++++|.|++..+..|..+ ..|+.|++++|.+. +..|..|..++.|+.|++++|+
T Consensus 256 ----lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 256 ----VPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp ----CCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ----cChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 34445666778888888888877666666543 56788888888877 5677778888888888888875
No 54
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=7.6e-33 Score=303.62 Aligned_cols=310 Identities=18% Similarity=0.166 Sum_probs=221.3
Q ss_pred cCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCccc
Q 003982 87 SSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSL 165 (782)
Q Consensus 87 ~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L 165 (782)
..+++|++|++++|.++..++ .|..+++|++|+|++|+++.+++..|.++++|++|+|++|++.. ..|..+.++++|
T Consensus 42 ~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L 119 (390)
T 3o6n_A 42 ITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRY--LPPHVFQNVPLL 119 (390)
T ss_dssp GGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCC--CCTTTTTTCTTC
T ss_pred cccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCc--CCHHHhcCCCCC
Confidence 457899999999999998887 47889999999999999999999999999999999999999998 566779999999
Q ss_pred CeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccc-cccchhhcccccCCCccccccccCCCCCcEEEeec
Q 003982 166 TTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAK-SDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHK 244 (782)
Q Consensus 166 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~ 244 (782)
++|+|++|+++.+.+..|..+++|++|++++|++++..|..+.. ..|+.|++++|.+... .+..+++|+.|++++
T Consensus 120 ~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~----~~~~l~~L~~L~l~~ 195 (390)
T 3o6n_A 120 TVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV----DLSLIPSLFHANVSY 195 (390)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC----CGGGCTTCSEEECCS
T ss_pred CEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc----ccccccccceeeccc
Confidence 99999999999887777899999999999999999665655543 3444455544444322 123344455555555
Q ss_pred ccccCCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCC-CCCCccEEEccCCcCCCCCCCCC
Q 003982 245 NQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPL-FPSKVQKVSLDHNNFCKNSSDAG 323 (782)
Q Consensus 245 N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~l~~L~l~~N~~~~~~~~~~ 323 (782)
|.+++. ...++|+.|++++|+++.. |.. ..++|+.|++++|++++.... .+.+|++|++++|.+++
T Consensus 196 n~l~~~----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~~~l~~l~~L~~L~Ls~n~l~~------ 262 (390)
T 3o6n_A 196 NLLSTL----AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEK------ 262 (390)
T ss_dssp SCCSEE----ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCE------
T ss_pred cccccc----CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCcccHHHcCCCCccEEECCCCcCCC------
Confidence 544432 1223445555555555422 221 124455555555555443110 12345555555554433
Q ss_pred CCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccc
Q 003982 324 KPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNL 403 (782)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 403 (782)
..|..+..+++|++|+|++|++++ +|..+..+++|++|+|++|++
T Consensus 263 ----------------------------------~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l 307 (390)
T 3o6n_A 263 ----------------------------------IMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHL 307 (390)
T ss_dssp ----------------------------------EESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCC
T ss_pred ----------------------------------cChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcc
Confidence 225566777888888888888885 566677788888888888888
Q ss_pred cccCCccCCCCCCCCeEecCCCcCCCCCCCCCCCcceecCCCCCCCCC
Q 003982 404 TGPIPDGLTKLASLQNLDVSNNNLSGKVPDFGSNVKFTVSPGNPFIGT 451 (782)
Q Consensus 404 ~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~~~~n~~~~~ 451 (782)
+ .+|..+..+++|+.|+|++|++++........++...+.+||+.|.
T Consensus 308 ~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 308 L-HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp C-CCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCEEHH
T ss_pred e-ecCccccccCcCCEEECCCCccceeCchhhccCCEEEcCCCCccch
Confidence 8 5677778888888888888888876555556777788888888773
No 55
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.5e-33 Score=300.77 Aligned_cols=189 Identities=23% Similarity=0.382 Sum_probs=166.4
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 658 (782)
.++|++.+.||+|+||.||+|.. .+|+.||||++..........+++.+|+++++.++||||+++++++.+.+..|+||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 46899999999999999999965 68999999999876655666788999999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecC
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~ 738 (782)
||+++|+|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++....
T Consensus 94 e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 94 EYASGGEVFDYLVAH-----GRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp CCCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred ECCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 999999999999763 358999999999999999999999 899999999999999999999999999998765
Q ss_pred CCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 739 DGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
... .....+||+.|+|||++.+.. ....++||||+||+
T Consensus 166 ~~~--~~~~~~gt~~y~aPE~~~~~~--~~~~~~DiwslG~i 203 (328)
T 3fe3_A 166 VGG--KLDAFCGAPPYAAPELFQGKK--YDGPEVDVWSLGVI 203 (328)
T ss_dssp SSC--GGGTTSSSGGGCCHHHHHTCC--CCSHHHHHHHHHHH
T ss_pred CCC--ccccccCCcceeCcccccCCC--cCCchhhhhhhHHH
Confidence 433 223457999999999987651 12478999999986
No 56
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=3.3e-32 Score=291.38 Aligned_cols=291 Identities=20% Similarity=0.277 Sum_probs=228.6
Q ss_pred CCCCCccccceEeCCCCCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCC
Q 003982 50 SSTGYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSV 128 (782)
Q Consensus 50 ~~~~~c~w~gv~c~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~ 128 (782)
+..+.|.|+.+.|+ +++++ .+|..+. ++|++|+|++|+|++.++ .|.++++|++|+|++|+++++
T Consensus 26 p~~c~c~l~~l~~~-----------~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~ 91 (330)
T 1xku_A 26 PFRCQCHLRVVQCS-----------DLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKI 91 (330)
T ss_dssp CTTCEEETTEEECT-----------TSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCB
T ss_pred CCCCcCCCeEEEec-----------CCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCee
Confidence 34445666655554 45555 4565544 689999999999998887 799999999999999999999
Q ss_pred CCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCC--CCCcc
Q 003982 129 PTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTG--SLPAS 206 (782)
Q Consensus 129 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~ 206 (782)
.+..|.++++|++|+|++|++.. +|..+. ++|++|++++|++++..+..|..+++|++|++++|.++. ..+..
T Consensus 92 ~~~~~~~l~~L~~L~Ls~n~l~~---l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 166 (330)
T 1xku_A 92 SPGAFAPLVKLERLYLSKNQLKE---LPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGA 166 (330)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSB---CCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTG
T ss_pred CHHHhcCCCCCCEEECCCCcCCc---cChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhh
Confidence 88889999999999999999887 565554 789999999999999988899999999999999999863 33333
Q ss_pred ccccccchhhcccccCCCccccccccCCCCCcEEEeecccccCCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCE
Q 003982 207 FAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLN 286 (782)
Q Consensus 207 ~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 286 (782)
+.++++|++|++++|+++..+..+. ++|++|++++|++++..|..|..+++|+.
T Consensus 167 ------------------------~~~l~~L~~L~l~~n~l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 220 (330)
T 1xku_A 167 ------------------------FQGMKKLSYIRIADTNITTIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAK 220 (330)
T ss_dssp ------------------------GGGCTTCCEEECCSSCCCSCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCE
T ss_pred ------------------------ccCCCCcCEEECCCCccccCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCE
Confidence 4568999999999999997665544 89999999999999888999999999999
Q ss_pred EEccCCcccCCCCCC---CCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCccc
Q 003982 287 ISLQNNKLQGPYPLF---PSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVT 363 (782)
Q Consensus 287 L~l~~N~l~~~~~~~---~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 363 (782)
|++++|++++..+.. +.+|+.|++++|+++. +|..+
T Consensus 221 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-----------------------------------------lp~~l 259 (330)
T 1xku_A 221 LGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK-----------------------------------------VPGGL 259 (330)
T ss_dssp EECCSSCCCEECTTTGGGSTTCCEEECCSSCCSS-----------------------------------------CCTTT
T ss_pred EECCCCcCceeChhhccCCCCCCEEECCCCcCcc-----------------------------------------CChhh
Confidence 999999999876643 3567888888887643 34445
Q ss_pred ccCCceeEEEccCcccccccCcccccc------ccCCeEecccccccc--cCCccCCCCCCCCeEecCCCc
Q 003982 364 CSQGRIITINLANKLLAGNISPAYANL------TSLKNLYLQQNNLTG--PIPDGLTKLASLQNLDVSNNN 426 (782)
Q Consensus 364 ~~~~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~ls~N~ 426 (782)
..+++|++|+|++|.|++..+..|... ..|+.|++++|.+.. ..|..|..+..|+.++|++|+
T Consensus 260 ~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 260 ADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp TTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred ccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 566778888888888887666666533 677888888888753 456777888888888888875
No 57
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=5.9e-32 Score=325.42 Aligned_cols=314 Identities=19% Similarity=0.207 Sum_probs=225.5
Q ss_pred EEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCc-ccCCCCCCCCCCCCCCEEeccC
Q 003982 69 TTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNN-FTSVPTGCFDGLTNLQVLSLSD 146 (782)
Q Consensus 69 ~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~-l~~~~~~~~~~l~~L~~L~Ls~ 146 (782)
...+.++++++ .+|. ..++|++|+|++|.|++..| .|.++++|++|+|++|. +..+++..|.++++|++|+|++
T Consensus 7 ~~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~ 82 (844)
T 3j0a_A 7 RIAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGS 82 (844)
T ss_dssp EEEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTT
T ss_pred eEEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCC
Confidence 45677788888 5665 45899999999999999877 89999999999999994 5568888999999999999999
Q ss_pred CCCCCCCCCCcccCCCcccCeeeccccccCCCCccc--ccCCCCCcEEEcccCcCCCCCC-ccccc-cccchhhcccccC
Q 003982 147 NPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDF--FDSFSNLQNLRLSYNNFTGSLP-ASFAK-SDIQNLWMNDQQL 222 (782)
Q Consensus 147 N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~--~~~l~~L~~L~Ls~N~l~~~~p-~~~~~-~~l~~l~l~~~~~ 222 (782)
|++.. ..|..|.++++|++|+|++|.+++..|.. |.++++|++|+|++|.+++..+ ..|.. .+|+.|++++|.+
T Consensus 83 N~l~~--~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i 160 (844)
T 3j0a_A 83 SKIYF--LHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQI 160 (844)
T ss_dssp CCCCE--ECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCC
T ss_pred CcCcc--cCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcC
Confidence 99988 56899999999999999999999866654 9999999999999999997655 35554 6788999988877
Q ss_pred CCccccccccCC--CCCcEEEeecccccCCCC-CCCCCCC------CCEEEcCCCcCccCcchhhcCC------------
Q 003982 223 GLSGTLDVLSGM--TQLRQVWLHKNQFTGPIP-DLSKCES------LFDLSLRDNQLTGVVPASVISL------------ 281 (782)
Q Consensus 223 ~~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~-~~~~l~~------L~~L~L~~N~l~~~~p~~~~~l------------ 281 (782)
.... ...+..+ ++|+.|++++|.+++..+ .+..+++ |+.|++++|++++.+|..+...
T Consensus 161 ~~~~-~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~ 239 (844)
T 3j0a_A 161 FLVC-EHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILA 239 (844)
T ss_dssp CCCC-SGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECC
T ss_pred CeeC-HHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecc
Confidence 5432 2334444 788888999888887655 3555544 8888888888877666655432
Q ss_pred --------------------------CCCCEEEccCCcccCCCCCC---CCCccEEEccCCcCCCCCCCCCCCCChhhhh
Q 003982 282 --------------------------PALLNISLQNNKLQGPYPLF---PSKVQKVSLDHNNFCKNSSDAGKPCDPQVTT 332 (782)
Q Consensus 282 --------------------------~~L~~L~l~~N~l~~~~~~~---~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~ 332 (782)
++|+.|++++|.+.+..|.. +.+|+.|+|++|+++++.
T Consensus 240 ~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~------------- 306 (844)
T 3j0a_A 240 HHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIA------------- 306 (844)
T ss_dssp SSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEEC-------------
T ss_pred cccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCC-------------
Confidence 45666666666666655543 245666666666665543
Q ss_pred HHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccccccCCccCC
Q 003982 333 LLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLT 412 (782)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 412 (782)
|..+..+++|++|+|++|.+++..|..|.++++|++|+|++|++.+..+..|.
T Consensus 307 ---------------------------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~ 359 (844)
T 3j0a_A 307 ---------------------------DEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFK 359 (844)
T ss_dssp ---------------------------TTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSC
T ss_pred ---------------------------hHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhc
Confidence 23334444555555555555554455555555555555555555544444455
Q ss_pred CCCCCCeEecCCCcCCC
Q 003982 413 KLASLQNLDVSNNNLSG 429 (782)
Q Consensus 413 ~l~~L~~L~ls~N~l~g 429 (782)
.+++|+.|+|++|++++
T Consensus 360 ~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 360 FLEKLQTLDLRDNALTT 376 (844)
T ss_dssp SCCCCCEEEEETCCSCC
T ss_pred CCCCCCEEECCCCCCCc
Confidence 55555555555555543
No 58
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-33 Score=301.12 Aligned_cols=191 Identities=28% Similarity=0.474 Sum_probs=156.4
Q ss_pred HhcCCCccceeecccceEEEEEE-eCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
..++|++.+.||+|+||.||+|. ..+|+.||||++...... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv 86 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG-SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMV 86 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc-hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEE
Confidence 45789999999999999999995 468999999999765432 2346789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
|||+++|+|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+|...
T Consensus 87 ~E~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~kL~DFG~a~~~ 158 (347)
T 3zgw_A 87 LEYCPGGELFDYIISQ-----DRLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKP 158 (347)
T ss_dssp EECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC-
T ss_pred EeCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCccHHHEEEcCCCCEEEEeccCcccc
Confidence 9999999999999763 358999999999999999999999 89999999999999999999999999999876
Q ss_pred CCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 738 PDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
...........+||+.|+|||++.+. ...+.++||||+||+
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwSlG~i 199 (347)
T 3zgw_A 159 KGNKDYHLQTCCGSLAYAAPELIQGK--SYLGSEADVWSMGIL 199 (347)
T ss_dssp -------------CGGGCCHHHHTTC-----CCHHHHHHHHHH
T ss_pred cCCCCccccccCCccCccCHHHHcCC--CCCCcHhHHHHHHHH
Confidence 54333233445799999999998765 113668999999986
No 59
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.2e-33 Score=309.66 Aligned_cols=198 Identities=24% Similarity=0.291 Sum_probs=167.1
Q ss_pred HHHHHHhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccC-ChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeC
Q 003982 574 EVLRQVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCING 651 (782)
Q Consensus 574 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~ 651 (782)
..++...++|++.+.||+|+||.||+|+. .+++.||+|++.+... .....+.+.+|+++++.++||||+++++++.++
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 34445568899999999999999999965 4688999999976321 112334588999999999999999999999999
Q ss_pred CeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEee
Q 003982 652 SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADF 731 (782)
Q Consensus 652 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~Df 731 (782)
+..|+||||+++|+|.+++.. ..+++..+..++.|++.||+|||+ .||+||||||+|||++.++.+||+||
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~------~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DF 212 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSN------YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADF 212 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCC
T ss_pred CEEEEEEeCCCCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEecc
Confidence 999999999999999999865 248999999999999999999999 89999999999999999999999999
Q ss_pred ccceecCCCCceeeecccccccccCccccccchhhh-HHHHHHHHHhccc
Q 003982 732 GLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMIL-CQMTGLIWLHGSV 780 (782)
Q Consensus 732 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~~~~~dvws~Gvv 780 (782)
|+|+.............+||+.|+|||++.+.-.-+ ++.++|+||+||+
T Consensus 213 G~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvi 262 (410)
T 3v8s_A 213 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 262 (410)
T ss_dssp TTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHH
T ss_pred ceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHH
Confidence 999887665543444568999999999987541101 5678999999986
No 60
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=8e-33 Score=291.36 Aligned_cols=186 Identities=26% Similarity=0.448 Sum_probs=163.6
Q ss_pred hcCCCccceeecccceEEEEEE-eCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 658 (782)
.++|++.+.||+|+||+||+|. ..+++.||||++.... ....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 96 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG--CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc--ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence 4689999999999999999996 4678999999997654 234577899999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecC
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~ 738 (782)
||+++|+|.+++.+ ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++....
T Consensus 97 e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (297)
T 3fxz_A 97 EYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (297)
T ss_dssp ECCTTCBHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred ECCCCCCHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 99999999999865 248999999999999999999999 899999999999999999999999999998776
Q ss_pred CCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 739 DGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.... ......||+.|+|||++.+. .++.++||||+|++
T Consensus 168 ~~~~-~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~i 205 (297)
T 3fxz_A 168 PEQS-KRSTMVGTPYWMAPEVVTRK---AYGPKVDIWSLGIM 205 (297)
T ss_dssp STTC-CBCCCCSCGGGCCHHHHHCS---CBCTHHHHHHHHHH
T ss_pred Cccc-ccCCccCCcCccChhhhcCC---CCCcHHHHHHHHHH
Confidence 5432 22345799999999998765 45778999999986
No 61
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.2e-33 Score=312.06 Aligned_cols=202 Identities=22% Similarity=0.284 Sum_probs=168.8
Q ss_pred cHHHHHHHhcCCCccceeecccceEEEEEEeC-CCcEEEEEEeccccCC-hhhHHHHHHHHHHHHhcCCCCcceEEeEEE
Q 003982 572 SIEVLRQVTDNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCI 649 (782)
Q Consensus 572 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~ 649 (782)
....++...++|++.++||+|+||+||+|+.. +++.||+|++++.... ......+.+|+.++..++||||+++++++.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34455566789999999999999999999664 5789999999763311 122345889999999999999999999999
Q ss_pred eCCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEE
Q 003982 650 NGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVA 729 (782)
Q Consensus 650 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~ 729 (782)
+++..|+||||+++|+|.+++.+. ...+++.++..++.|++.||+|||+ .||+||||||+|||++.++.+||+
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~----~~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~ 217 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKF----EDRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLA 217 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTT----TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEEC
T ss_pred eCCEEEEEEecCCCCcHHHHHHHc----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEc
Confidence 999999999999999999999752 2458999999999999999999999 899999999999999999999999
Q ss_pred eeccceecCCCCceeeecccccccccCccccccch--hhhHHHHHHHHHhccc
Q 003982 730 DFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHW--MILCQMTGLIWLHGSV 780 (782)
Q Consensus 730 DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~~~dvws~Gvv 780 (782)
|||+|+.............+||+.|+|||++...- ...++.++|+||+||+
T Consensus 218 DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvi 270 (437)
T 4aw2_A 218 DFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVC 270 (437)
T ss_dssp CCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHH
T ss_pred chhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHH
Confidence 99999877655444444568999999999886210 0135678999999986
No 62
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1e-31 Score=299.31 Aligned_cols=305 Identities=21% Similarity=0.259 Sum_probs=196.3
Q ss_pred CCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEecc
Q 003982 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLS 145 (782)
Q Consensus 66 ~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 145 (782)
.+++.|++++|.+++ +|+. +++|++|++++|++++.+. + .++|++|+|++|+++++| .|.++++|++|+++
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l~~-~--~~~L~~L~L~~n~l~~lp--~~~~l~~L~~L~l~ 161 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKALSD-L--PPLLEYLGVSNNQLEKLP--ELQNSSFLKIIDVD 161 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCCCS-C--CTTCCEEECCSSCCSSCC--CCTTCTTCCEEECC
T ss_pred CCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcccC-C--CCCCCEEECcCCCCCCCc--ccCCCCCCCEEECC
Confidence 467777777777776 5543 3677788888887776433 1 167888888888888876 37888888888888
Q ss_pred CCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCc
Q 003982 146 DNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLS 225 (782)
Q Consensus 146 ~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~ 225 (782)
+|++.. +|..+ .+|++|++++|++++. | .+..+++|++|++++|++++ +|... ..++.|++++|.+..
T Consensus 162 ~N~l~~---lp~~~---~~L~~L~L~~n~l~~l-~-~~~~l~~L~~L~l~~N~l~~-l~~~~--~~L~~L~l~~n~l~~- 229 (454)
T 1jl5_A 162 NNSLKK---LPDLP---PSLEFIAAGNNQLEEL-P-ELQNLPFLTAIYADNNSLKK-LPDLP--LSLESIVAGNNILEE- 229 (454)
T ss_dssp SSCCSC---CCCCC---TTCCEEECCSSCCSSC-C-CCTTCTTCCEEECCSSCCSS-CCCCC--TTCCEEECCSSCCSS-
T ss_pred CCcCcc---cCCCc---ccccEEECcCCcCCcC-c-cccCCCCCCEEECCCCcCCc-CCCCc--CcccEEECcCCcCCc-
Confidence 888776 44433 4788888888888774 4 57788888888888888873 55443 367778887777652
Q ss_pred cccccccCCCCCcEEEeecccccCCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCCCCCCc
Q 003982 226 GTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPSKV 305 (782)
Q Consensus 226 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 305 (782)
.+.+.++++|++|++++|++++.+.. +++|+.|++++|++++ +|.. .++|++|++++|++++. |..+.+|
T Consensus 230 --lp~~~~l~~L~~L~l~~N~l~~l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~~~~L 299 (454)
T 1jl5_A 230 --LPELQNLPFLTTIYADNNLLKTLPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SELPPNL 299 (454)
T ss_dssp --CCCCTTCTTCCEEECCSSCCSSCCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCCCTTC
T ss_pred --ccccCCCCCCCEEECCCCcCCccccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cCcCCcC
Confidence 22477788888888888888764432 3678888888888875 4443 36788888888888763 3344678
Q ss_pred cEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCc
Q 003982 306 QKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISP 385 (782)
Q Consensus 306 ~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~ 385 (782)
+.|++++|+++++... +..+.....+++.+..+|.. .++|++|++++|++++ +|.
T Consensus 300 ~~L~l~~N~l~~i~~~---------------------~~~L~~L~Ls~N~l~~lp~~---~~~L~~L~L~~N~l~~-lp~ 354 (454)
T 1jl5_A 300 YYLNASSNEIRSLCDL---------------------PPSLEELNVSNNKLIELPAL---PPRLERLIASFNHLAE-VPE 354 (454)
T ss_dssp CEEECCSSCCSEECCC---------------------CTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCSC-CCC
T ss_pred CEEECcCCcCCcccCC---------------------cCcCCEEECCCCcccccccc---CCcCCEEECCCCcccc-ccc
Confidence 8888888877664310 11122222233444445544 3677777777777773 555
Q ss_pred cccccccCCeEecccccccc--cCCccCCCC-------------CCCCeEecCCCcCCC
Q 003982 386 AYANLTSLKNLYLQQNNLTG--PIPDGLTKL-------------ASLQNLDVSNNNLSG 429 (782)
Q Consensus 386 ~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l-------------~~L~~L~ls~N~l~g 429 (782)
.+++|++|+|++|++++ .+|..+..+ ++|+.||+++|+++|
T Consensus 355 ---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 355 ---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLRE 410 (454)
T ss_dssp ---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC------------------------
T ss_pred ---hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCc
Confidence 35777777777777777 677777666 667777777777776
No 63
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=5.3e-32 Score=301.54 Aligned_cols=330 Identities=19% Similarity=0.207 Sum_probs=212.9
Q ss_pred CCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCC-------------CEEeCCCCcccCCCCC
Q 003982 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSL-------------QDIYLDNNNFTSVPTG 131 (782)
Q Consensus 66 ~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L-------------~~L~Ls~n~l~~~~~~ 131 (782)
.++++|++++|++ |.+|++|+++++|++|++++|.++|..| .++++.+| ++|++++|+++++|..
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~~ 89 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPEL 89 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCSC
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCCC
Confidence 3577788888888 6788888888888888888888776655 56655542 5555555555554431
Q ss_pred C----------------CCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcc
Q 003982 132 C----------------FDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLS 195 (782)
Q Consensus 132 ~----------------~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 195 (782)
. -..+++|++|++++|++.. +|.. .++|++|++++|++++ +| .|..+++|++|+++
T Consensus 90 ~~~L~~L~l~~n~l~~lp~~~~~L~~L~l~~n~l~~---l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~ 161 (454)
T 1jl5_A 90 PPHLESLVASCNSLTELPELPQSLKSLLVDNNNLKA---LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVD 161 (454)
T ss_dssp CTTCSEEECCSSCCSSCCCCCTTCCEEECCSSCCSC---CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECC
T ss_pred cCCCCEEEccCCcCCccccccCCCcEEECCCCccCc---ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECC
Confidence 0 0012455555555555544 1211 1578899999999987 46 58899999999999
Q ss_pred cCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccccCCCCCCCCCCCCCEEEcCCCcCccCcc
Q 003982 196 YNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVP 275 (782)
Q Consensus 196 ~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p 275 (782)
+|+++ .+|..+ ..|++|++++|.+... +.+.++++|++|++++|++++.+... ++|++|++++|+++ .+|
T Consensus 162 ~N~l~-~lp~~~--~~L~~L~L~~n~l~~l---~~~~~l~~L~~L~l~~N~l~~l~~~~---~~L~~L~l~~n~l~-~lp 231 (454)
T 1jl5_A 162 NNSLK-KLPDLP--PSLEFIAAGNNQLEEL---PELQNLPFLTAIYADNNSLKKLPDLP---LSLESIVAGNNILE-ELP 231 (454)
T ss_dssp SSCCS-CCCCCC--TTCCEEECCSSCCSSC---CCCTTCTTCCEEECCSSCCSSCCCCC---TTCCEEECCSSCCS-SCC
T ss_pred CCcCc-ccCCCc--ccccEEECcCCcCCcC---ccccCCCCCCEEECCCCcCCcCCCCc---CcccEEECcCCcCC-ccc
Confidence 99998 477655 3788999998887642 35888999999999999998754322 58999999999998 677
Q ss_pred hhhcCCCCCCEEEccCCcccCCCCCCCCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCC
Q 003982 276 ASVISLPALLNISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNA 355 (782)
Q Consensus 276 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (782)
.++.+++|++|++++|++++ +|..+.+|+.|++++|++++++... ..+.....+++.
T Consensus 232 -~~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~N~l~~l~~~~---------------------~~L~~L~ls~N~ 288 (454)
T 1jl5_A 232 -ELQNLPFLTTIYADNNLLKT-LPDLPPSLEALNVRDNYLTDLPELP---------------------QSLTFLDVSENI 288 (454)
T ss_dssp -CCTTCTTCCEEECCSSCCSS-CCSCCTTCCEEECCSSCCSCCCCCC---------------------TTCCEEECCSSC
T ss_pred -ccCCCCCCCEEECCCCcCCc-ccccccccCEEECCCCcccccCccc---------------------CcCCEEECcCCc
Confidence 48899999999999999986 5556789999999999998765211 111112222233
Q ss_pred CCCCCcccccCCceeEEEccCcccccccCcccccc-ccCCeEecccccccccCCccCCCCCCCCeEecCCCcCCCCCCCC
Q 003982 356 CDGWPFVTCSQGRIITINLANKLLAGNISPAYANL-TSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVPDF 434 (782)
Q Consensus 356 ~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~ 434 (782)
+..+|.. .++|++|++++|.+++ ++ .+ ++|++|++++|++++ +|.. +++|+.|++++|++++ +|..
T Consensus 289 l~~l~~~---~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~~ 355 (454)
T 1jl5_A 289 FSGLSEL---PPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPEL 355 (454)
T ss_dssp CSEESCC---CTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCCC
T ss_pred cCcccCc---CCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccch
Confidence 3333221 1577888888888875 22 23 478888888888885 6654 5788888888888885 4445
Q ss_pred CCCcceecCCCCCCCC
Q 003982 435 GSNVKFTVSPGNPFIG 450 (782)
Q Consensus 435 ~~~~~~~~~~~n~~~~ 450 (782)
...++...+.+|++.+
T Consensus 356 l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 356 PQNLKQLHVEYNPLRE 371 (454)
T ss_dssp CTTCCEEECCSSCCSS
T ss_pred hhhccEEECCCCCCCc
Confidence 5677777888887754
No 64
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.4e-33 Score=297.43 Aligned_cols=233 Identities=30% Similarity=0.490 Sum_probs=183.4
Q ss_pred CCCCCCCCEEeccC-CCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccc
Q 003982 133 FDGLTNLQVLSLSD-NPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSD 211 (782)
Q Consensus 133 ~~~l~~L~~L~Ls~-N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 211 (782)
|.++++|++|+|++ |.+.. .+|..|.++++|++|+|++|++++.+|..|..+++|++|+|++|++++.+|..+.
T Consensus 72 l~~l~~L~~L~L~~~n~l~~--~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--- 146 (313)
T 1ogq_A 72 LANLPYLNFLYIGGINNLVG--PIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS--- 146 (313)
T ss_dssp GGGCTTCSEEEEEEETTEES--CCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGG---
T ss_pred HhCCCCCCeeeCCCCCcccc--cCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHh---
Confidence 33344444444442 43333 3566677777777777777888777788888888888888888888877776654
Q ss_pred cchhhcccccCCCccccccccCCCCCcEEEeecccccCCCC-CCCCCC-CCCEEEcCCCcCccCcchhhcCCCCCCEEEc
Q 003982 212 IQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIP-DLSKCE-SLFDLSLRDNQLTGVVPASVISLPALLNISL 289 (782)
Q Consensus 212 l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 289 (782)
++++|++|+|++|++++..| .+..++ +|+.|+|++|++++.+|..+..++ |++|++
T Consensus 147 ---------------------~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~L 204 (313)
T 1ogq_A 147 ---------------------SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDL 204 (313)
T ss_dssp ---------------------GCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEEC
T ss_pred ---------------------cCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEEC
Confidence 47888888888888886555 577776 888888888888888888888876 888888
Q ss_pred cCCcccCCCCCCCCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCce
Q 003982 290 QNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRI 369 (782)
Q Consensus 290 ~~N~l~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L 369 (782)
++|++++.+| ..+..+++|
T Consensus 205 s~N~l~~~~~-------------------------------------------------------------~~~~~l~~L 223 (313)
T 1ogq_A 205 SRNMLEGDAS-------------------------------------------------------------VLFGSDKNT 223 (313)
T ss_dssp CSSEEEECCG-------------------------------------------------------------GGCCTTSCC
T ss_pred cCCcccCcCC-------------------------------------------------------------HHHhcCCCC
Confidence 8888775433 334556789
Q ss_pred eEEEccCcccccccCccccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcCCCCCCCCC--CCcceecCCCCC
Q 003982 370 ITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVPDFG--SNVKFTVSPGNP 447 (782)
Q Consensus 370 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~--~~~~~~~~~~n~ 447 (782)
+.|+|++|.+++.+|. +..+++|++|+|++|+|++.+|..|..+++|+.|+|++|+++|.+|... ..+....+.+||
T Consensus 224 ~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 224 QKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNK 302 (313)
T ss_dssp SEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSS
T ss_pred CEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCC
Confidence 9999999999987776 8899999999999999999999999999999999999999999999775 456677899999
Q ss_pred CCCCCCC
Q 003982 448 FIGTNVD 454 (782)
Q Consensus 448 ~~~~~~~ 454 (782)
+.|+.+.
T Consensus 303 ~lc~~p~ 309 (313)
T 1ogq_A 303 CLCGSPL 309 (313)
T ss_dssp EEESTTS
T ss_pred CccCCCC
Confidence 9998765
No 65
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2e-32 Score=316.92 Aligned_cols=310 Identities=19% Similarity=0.167 Sum_probs=230.5
Q ss_pred cCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCccc
Q 003982 87 SSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSL 165 (782)
Q Consensus 87 ~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L 165 (782)
-.+.+++.|++++|.++.+++ .|.++++|++|+|++|.|+++++..|.++++|++|+|++|.+.. ..|..|.++++|
T Consensus 48 l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L 125 (597)
T 3oja_B 48 ITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRY--LPPHVFQNVPLL 125 (597)
T ss_dssp GGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCC--CCTTTTTTCTTC
T ss_pred ccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCC--CCHHHHcCCCCC
Confidence 356889999999999999888 57889999999999999999999999999999999999999998 566778999999
Q ss_pred CeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccc-cccchhhcccccCCCccccccccCCCCCcEEEeec
Q 003982 166 TTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAK-SDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHK 244 (782)
Q Consensus 166 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~ 244 (782)
++|+|++|.|+++.+..|..+++|++|+|++|.+++..|..|.. ..|+.|++++|.+... .++.+++|+.|++++
T Consensus 126 ~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~l~~L~~L~l~~ 201 (597)
T 3oja_B 126 TVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV----DLSLIPSLFHANVSY 201 (597)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC----CGGGCTTCSEEECCS
T ss_pred CEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc----Chhhhhhhhhhhccc
Confidence 99999999999988888999999999999999999777766544 3444444444443321 123344444444444
Q ss_pred ccccCCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCC-CCCCccEEEccCCcCCCCCCCCC
Q 003982 245 NQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPL-FPSKVQKVSLDHNNFCKNSSDAG 323 (782)
Q Consensus 245 N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~l~~L~l~~N~~~~~~~~~~ 323 (782)
|.+++. ...++|+.|++++|.++...+. + .++|+.|+|++|.+++.... .+.+|+.|+|++|.+++
T Consensus 202 n~l~~l----~~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~~n~l~~~~~l~~l~~L~~L~Ls~N~l~~------ 268 (597)
T 3oja_B 202 NLLSTL----AIPIAVEELDASHNSINVVRGP-V--NVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEK------ 268 (597)
T ss_dssp SCCSEE----ECCTTCSEEECCSSCCCEEECS-C--CSCCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCE------
T ss_pred Cccccc----cCCchhheeeccCCcccccccc-c--CCCCCEEECCCCCCCCChhhccCCCCCEEECCCCccCC------
Confidence 444432 1223444444444444422211 1 13444455555544442110 12344445554444433
Q ss_pred CCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccc
Q 003982 324 KPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNL 403 (782)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 403 (782)
..|..+..+++|+.|+|++|.+++ +|..+..+++|++|+|++|++
T Consensus 269 ----------------------------------~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l 313 (597)
T 3oja_B 269 ----------------------------------IMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHL 313 (597)
T ss_dssp ----------------------------------EESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCC
T ss_pred ----------------------------------CCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCC
Confidence 346678888999999999999997 677888899999999999999
Q ss_pred cccCCccCCCCCCCCeEecCCCcCCCCCCCCCCCcceecCCCCCCCCC
Q 003982 404 TGPIPDGLTKLASLQNLDVSNNNLSGKVPDFGSNVKFTVSPGNPFIGT 451 (782)
Q Consensus 404 ~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~~~~~~~n~~~~~ 451 (782)
+ .+|..+..+++|+.|+|++|+|++..+.....+....+.+||+.|.
T Consensus 314 ~-~i~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 314 L-HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp C-CCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCEEHH
T ss_pred C-ccCcccccCCCCCEEECCCCCCCCcChhhcCCCCEEEeeCCCCCCh
Confidence 9 7888889999999999999999988766667888899999999884
No 66
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=5.6e-32 Score=303.78 Aligned_cols=326 Identities=24% Similarity=0.312 Sum_probs=249.3
Q ss_pred CCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEecc
Q 003982 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLS 145 (782)
Q Consensus 66 ~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 145 (782)
.+++.|+|++|.+++..+ +..+++|++|++++|.+++.++ +.++++|++|+|++|+++++++ +.++++|++|+++
T Consensus 68 ~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~ 142 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELS 142 (466)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEE
T ss_pred cCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh-hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECC
Confidence 479999999999996544 9999999999999999998877 9999999999999999999876 8999999999999
Q ss_pred CCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCc
Q 003982 146 DNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLS 225 (782)
Q Consensus 146 ~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~ 225 (782)
+|++.. ++ .+..+++|+.|+++ |.+.+.. .+..+++|++|++++|+++ .++.--....|+.|++++|.+...
T Consensus 143 ~n~l~~---~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~-~~~~l~~l~~L~~L~l~~n~l~~~ 214 (466)
T 1o6v_A 143 SNTISD---IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVS-DISVLAKLTNLESLIATNNQISDI 214 (466)
T ss_dssp EEEECC---CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCC-CCGGGGGCTTCSEEECCSSCCCCC
T ss_pred CCccCC---Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCC-CChhhccCCCCCEEEecCCccccc
Confidence 999887 33 47788888888885 4555543 2778888888888888877 344322225777788877776533
Q ss_pred cccccccCCCCCcEEEeecccccCCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCC-CCCC
Q 003982 226 GTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPL-FPSK 304 (782)
Q Consensus 226 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~ 304 (782)
.. +..+++|++|++++|++++. +.+..+++|+.|++++|++++..| +..+++|+.|++++|++++..+. .+.+
T Consensus 215 ~~---~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~ 288 (466)
T 1o6v_A 215 TP---LGILTNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTA 288 (466)
T ss_dssp GG---GGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGGTTCTT
T ss_pred cc---ccccCCCCEEECCCCCcccc-hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCccccccCCCc
Confidence 22 56677888888888887764 456777888888888888876554 77788888888888888765542 3457
Q ss_pred ccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccC
Q 003982 305 VQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNIS 384 (782)
Q Consensus 305 l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p 384 (782)
|+.|++++|+++++.. +.....+......++.+..++. +..+++|+.|++++|.+++.
T Consensus 289 L~~L~L~~n~l~~~~~-------------------~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~-- 346 (466)
T 1o6v_A 289 LTNLELNENQLEDISP-------------------ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNKVSDV-- 346 (466)
T ss_dssp CSEEECCSSCCSCCGG-------------------GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCCCCC--
T ss_pred cCeEEcCCCcccCchh-------------------hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCccCCc--
Confidence 7888888887766441 0011112222223333333433 67789999999999999975
Q ss_pred ccccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcCCCCCCCC
Q 003982 385 PAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVPDF 434 (782)
Q Consensus 385 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~ 434 (782)
..+.++++|++|++++|++++..| +..+++|+.|++++|++++.+..+
T Consensus 347 ~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~p~~~ 394 (466)
T 1o6v_A 347 SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNY 394 (466)
T ss_dssp GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEECCCBCC
T ss_pred hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccCCchhh
Confidence 579999999999999999998887 899999999999999999965543
No 67
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3.4e-33 Score=298.54 Aligned_cols=209 Identities=41% Similarity=0.685 Sum_probs=177.0
Q ss_pred CcccccHHHHHHHhcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEe
Q 003982 567 GNVAISIEVLRQVTDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLG 646 (782)
Q Consensus 567 ~~~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~ 646 (782)
....++.+++....++|++.+.||+|+||.||+|+..+++.||||++..... ......+.+|++++++++||||+++++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccC-chHHHHHHHHHHHHHhccCCCccceEE
Confidence 3456788899999999999999999999999999887899999999976542 222346899999999999999999999
Q ss_pred EEEeCCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcE
Q 003982 647 YCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRA 726 (782)
Q Consensus 647 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~ 726 (782)
++.+++..++||||+++|+|.+++..... ...++++..+..++.|++.||+|||+.+..||+||||||+||+++.++.+
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~ 173 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 173 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCST-TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCE
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCE
Confidence 99999999999999999999999976433 23468999999999999999999999222299999999999999999999
Q ss_pred EEEeeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 727 kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
||+|||+++..............||+.|+|||++.+. .++.++||||+|++
T Consensus 174 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~i 224 (326)
T 3uim_A 174 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG---KSSEKTDVFGYGVM 224 (326)
T ss_dssp EECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHS---EECHHHHHHHHHHH
T ss_pred EeccCccccccCcccccccccccCCcCccCHHHhccC---CCCccccchhHHHH
Confidence 9999999988765544444556799999999988654 35778999999986
No 68
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=5.9e-33 Score=296.94 Aligned_cols=189 Identities=28% Similarity=0.360 Sum_probs=163.1
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccC-ChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
.++|++.+.||+|+||.||+|+. .+++.||+|++++... .......+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 36799999999999999999965 4789999999976432 233567789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
|||+++|+|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 155 (337)
T 1o6l_A 84 MEYANGGELFFHLSRE-----RVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEG 155 (337)
T ss_dssp EECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhc
Confidence 9999999999998762 358999999999999999999999 89999999999999999999999999999864
Q ss_pred CCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 738 PDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..... .....+||+.|+|||++.+. +++.++|+||+||+
T Consensus 156 ~~~~~-~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~i 194 (337)
T 1o6l_A 156 ISDGA-TMKTFCGTPEYLAPEVLEDN---DYGRAVDWWGLGVV 194 (337)
T ss_dssp CCTTC-CBCCCEECGGGCCGGGGSSS---CBCTTHHHHHHHHH
T ss_pred ccCCC-cccccccChhhCChhhhcCC---CCCchhhcccchhH
Confidence 33222 22345799999999998765 45778999999986
No 69
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.7e-32 Score=290.94 Aligned_cols=189 Identities=26% Similarity=0.431 Sum_probs=162.2
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 658 (782)
.++|.+.+.||+|+||+||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 86 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD--EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFIT 86 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEE
Confidence 35788999999999999999965 568999999986533 556788999999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecC
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~ 738 (782)
||+++++|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++...
T Consensus 87 e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 159 (310)
T 3s95_A 87 EYIKGGTLRGIIKSM----DSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMV 159 (310)
T ss_dssp ECCTTCBHHHHHHHC----CTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC
T ss_pred EecCCCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceecc
Confidence 999999999999763 2458999999999999999999999 899999999999999999999999999998765
Q ss_pred CCCcee-------------eecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 739 DGKYSV-------------ETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 739 ~~~~~~-------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
...... .....||+.|+|||++.+. .++.++||||+|++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~~ 211 (310)
T 3s95_A 160 DEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGR---SYDEKVDVFSFGIV 211 (310)
T ss_dssp --------------------CCCCSCGGGCCHHHHTTC---CCCTHHHHHHHHHH
T ss_pred cccccccccccccccccccccccCCCcceeCHHHhcCC---CCCcHHHHHHHHHH
Confidence 433211 1135799999999998765 45678999999986
No 70
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=6.2e-33 Score=291.82 Aligned_cols=190 Identities=25% Similarity=0.409 Sum_probs=158.5
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccC-ChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
.++|++.+.||+|+||.||+|.. .+++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 46899999999999999999954 5789999999865443 234567899999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
|||+++++|.+++... .++++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++..
T Consensus 90 ~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 161 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESH-----GPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL 161 (294)
T ss_dssp EECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC
T ss_pred EeCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCcccc
Confidence 9999999999999763 358999999999999999999999 89999999999999999999999999999876
Q ss_pred CCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 738 PDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
............||+.|+|||++.+. .++.++|+||+|++
T Consensus 162 ~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~~ 201 (294)
T 4eqm_A 162 SETSLTQTNHVLGTVQYFSPEQAKGE---ATDECTDIYSIGIV 201 (294)
T ss_dssp -------------CCSSCCHHHHHTC---CCCTTHHHHHHHHH
T ss_pred ccccccccCccccCccccCHhHhcCC---CCCchHhHHHHHHH
Confidence 55443333445799999999988765 34667899999986
No 71
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=5.6e-33 Score=299.08 Aligned_cols=189 Identities=25% Similarity=0.390 Sum_probs=159.2
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccC-ChhhHHHHHHHHHHHHhc-CCCCcceEEeEEEeCCeEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLL 656 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~l 656 (782)
.++|++.+.||+|+||.||+|+. .+++.||||++++... .....+.+.+|.++++.+ +||||+++++++.+.+..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 47899999999999999999965 5689999999976432 233556788999999988 69999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeecccee
Q 003982 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (782)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~ 736 (782)
||||+++|+|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+|||++.++.+||+|||+|+.
T Consensus 102 v~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKS-----RRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceee
Confidence 99999999999999763 458999999999999999999999 8999999999999999999999999999986
Q ss_pred cCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 737 APDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 737 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..... ......+||+.|+|||++.+. +++.++|+||+||+
T Consensus 174 ~~~~~-~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~i 213 (353)
T 3txo_A 174 GICNG-VTTATFCGTPDYIAPEILQEM---LYGPAVDWWAMGVL 213 (353)
T ss_dssp SCC----------CCGGGCCHHHHHHH---HCTTHHHHHHHHHH
T ss_pred cccCC-ccccccCCCcCeEChhhcCCC---CcCCccCCCcchHH
Confidence 44322 123346799999999998764 56778999999986
No 72
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.2e-33 Score=306.46 Aligned_cols=202 Identities=24% Similarity=0.289 Sum_probs=169.0
Q ss_pred cHHHHHHHhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccC-ChhhHHHHHHHHHHHHhcCCCCcceEEeEEE
Q 003982 572 SIEVLRQVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCI 649 (782)
Q Consensus 572 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~ 649 (782)
..++.+...++|++.+.||+|+||.||+|+. .+++.||||++.+... .....+.+.+|.+++..++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 3444555678999999999999999999965 5789999999976432 1223455889999999999999999999999
Q ss_pred eCCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEE
Q 003982 650 NGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVA 729 (782)
Q Consensus 650 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~ 729 (782)
+.+..|+||||+++|+|.+++.+.. ..+++..+..++.|++.||+|||+ .||+||||||+|||++.++.+||+
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~ 204 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFG----ERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLA 204 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHS----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEEC
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEe
Confidence 9999999999999999999997632 358999999999999999999999 899999999999999999999999
Q ss_pred eeccceecCCCCceeeecccccccccCccccccch----hhhHHHHHHHHHhccc
Q 003982 730 DFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHW----MILCQMTGLIWLHGSV 780 (782)
Q Consensus 730 DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~~~~dvws~Gvv 780 (782)
|||+|+.............+||+.|+|||++.+.- ...++.++|+||+||+
T Consensus 205 DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvi 259 (412)
T 2vd5_A 205 DFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVF 259 (412)
T ss_dssp CCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHH
T ss_pred echhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHH
Confidence 99999887654433334468999999999886310 0135678999999986
No 73
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.6e-32 Score=296.24 Aligned_cols=189 Identities=26% Similarity=0.421 Sum_probs=163.9
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCCh----hhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCe
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGN----KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE 653 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~ 653 (782)
+.++|++.+.||+|+||.||+|.. .+|+.||+|++++..... ...+.+.+|+.++++++||||+++++++.+...
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 457899999999999999999955 578999999998654322 245789999999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCC----cEEEE
Q 003982 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM----RAKVA 729 (782)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~----~~kL~ 729 (782)
.++||||+++|+|.+++.. ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++ .+||+
T Consensus 90 ~~lv~e~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~ 161 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLI 161 (361)
T ss_dssp EEEEEECCCSCBHHHHHTT-----CSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred EEEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEE
Confidence 9999999999999999854 3468999999999999999999999 8999999999999998776 79999
Q ss_pred eeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 730 DFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 730 DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|||+++...... .....+||+.|+|||++.+. .++.++|+||+||+
T Consensus 162 DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslGvi 207 (361)
T 2yab_A 162 DFGLAHEIEDGV--EFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVI 207 (361)
T ss_dssp CCSSCEECCTTC--CCCCCCSCGGGCCHHHHTTC---CCCTHHHHHHHHHH
T ss_pred ecCCceEcCCCC--ccccCCCCccEECchHHcCC---CCCccccHHHHHHH
Confidence 999998876533 22345799999999998764 45678999999986
No 74
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.98 E-value=7.8e-33 Score=300.43 Aligned_cols=190 Identities=24% Similarity=0.356 Sum_probs=163.9
Q ss_pred cCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccC-ChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEE
Q 003982 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 658 (782)
++|++.+.||+|+||.||+|.. .+++.||+|++.+... .....+.+.+|+++++.++||||+++++++.+.+..|+||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 6799999999999999999954 5688999999976432 2235678899999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecC
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~ 738 (782)
||+++|+|..++.. ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+|+...
T Consensus 95 e~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQ-----NVHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp CCCTTEEHHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred ecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 99999999999865 3458999999999999999999999 899999999999999999999999999998775
Q ss_pred CCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 739 DGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
... .....+||+.|+|||++.+.-..+++.++|+||+||+
T Consensus 167 ~~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i 206 (384)
T 4fr4_A 167 RET--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVT 206 (384)
T ss_dssp TTC--CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHH
T ss_pred CCC--ceeccCCCccccCCeeeccCCCCCCCccceeechHHH
Confidence 433 2234679999999999865322345778999999986
No 75
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.98 E-value=2.5e-32 Score=295.15 Aligned_cols=284 Identities=21% Similarity=0.278 Sum_probs=227.5
Q ss_pred CCCCccccceEeCCCCCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCC
Q 003982 51 STGYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVP 129 (782)
Q Consensus 51 ~~~~c~w~gv~c~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~ 129 (782)
..+.|.|.|+ |+ +++++++ .+|..+. ++|++|++++|++++.++ .|.++++|++|+|++|++++++
T Consensus 26 ~~~~C~~~~~-c~---------~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 92 (353)
T 2z80_A 26 ASLSCDRNGI-CK---------GSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIE 92 (353)
T ss_dssp -CCEECTTSE-EE---------CCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEEC
T ss_pred cCCCCCCCeE-ee---------CCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccC
Confidence 3577999987 64 4567777 6777655 489999999999999887 7999999999999999999999
Q ss_pred CCCCCCCCCCCEEeccCCCCCCCCCCCc-ccCCCcccCeeeccccccCCCCc-ccccCCCCCcEEEcccCc-CCCCCCcc
Q 003982 130 TGCFDGLTNLQVLSLSDNPNLAPWPFPN-ELTKSTSLTTLYMDNANIFGLIP-DFFDSFSNLQNLRLSYNN-FTGSLPAS 206 (782)
Q Consensus 130 ~~~~~~l~~L~~L~Ls~N~l~~~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~-l~~~~p~~ 206 (782)
+..|.++++|++|+|++|++.. +|. .+.++++|++|+|++|++++..+ ..|..+++|++|++++|+ +.+..|..
T Consensus 93 ~~~~~~l~~L~~L~Ls~n~l~~---~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~ 169 (353)
T 2z80_A 93 EDSFSSLGSLEHLDLSYNYLSN---LSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKD 169 (353)
T ss_dssp TTTTTTCTTCCEEECCSSCCSS---CCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTT
T ss_pred HhhcCCCCCCCEEECCCCcCCc---CCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHH
Confidence 9899999999999999999987 444 48899999999999999987755 588899999999999995 55333333
Q ss_pred ccccccchhhcccccCCCccccccccCCCCCcEEEeecccccCCCC-CCCCCCCCCEEEcCCCcCccCcchhhcCCCCCC
Q 003982 207 FAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIP-DLSKCESLFDLSLRDNQLTGVVPASVISLPALL 285 (782)
Q Consensus 207 ~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 285 (782)
+.++++|++|++++|++++..+ .+..+++|++|++++|+++...+..+..+++|+
T Consensus 170 ------------------------~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~ 225 (353)
T 2z80_A 170 ------------------------FAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVE 225 (353)
T ss_dssp ------------------------TTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEE
T ss_pred ------------------------ccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhccccc
Confidence 4468999999999999998755 588899999999999999754444455688999
Q ss_pred EEEccCCcccCCCCCCCCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCccccc
Q 003982 286 NISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCS 365 (782)
Q Consensus 286 ~L~l~~N~l~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 365 (782)
.|++++|++++..+..++. ...
T Consensus 226 ~L~L~~n~l~~~~~~~l~~----------------------------------------------------------~~~ 247 (353)
T 2z80_A 226 CLELRDTDLDTFHFSELST----------------------------------------------------------GET 247 (353)
T ss_dssp EEEEESCBCTTCCCC----------------------------------------------------------------C
T ss_pred EEECCCCcccccccccccc----------------------------------------------------------ccc
Confidence 9999999988654432110 011
Q ss_pred CCceeEEEccCccccc----ccCccccccccCCeEecccccccccCCcc-CCCCCCCCeEecCCCcCCCCCCC
Q 003982 366 QGRIITINLANKLLAG----NISPAYANLTSLKNLYLQQNNLTGPIPDG-LTKLASLQNLDVSNNNLSGKVPD 433 (782)
Q Consensus 366 ~~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L~ls~N~l~g~~p~ 433 (782)
...++.++|++|.+++ .+|..+.++++|++|+|++|+|+ .+|.. |..+++|+.|+|++|++++.+|.
T Consensus 248 ~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 248 NSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp CCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred cchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 2345666666666665 47888999999999999999999 66666 58999999999999999998873
No 76
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.98 E-value=1.1e-31 Score=289.38 Aligned_cols=305 Identities=20% Similarity=0.281 Sum_probs=256.2
Q ss_pred ccCCccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCccc
Q 003982 86 ISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSL 165 (782)
Q Consensus 86 l~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L 165 (782)
+..+++|++|++++|.+... +.+..+++|++|+|++|+++.+++ +.++++|++|+|++|++.. + ..+..+++|
T Consensus 40 ~~~l~~L~~L~l~~~~i~~~-~~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~---~-~~~~~l~~L 112 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVASI-QGIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD---I-SALQNLTNL 112 (347)
T ss_dssp HHHHTTCSEEECCSSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC---C-GGGTTCTTC
T ss_pred chhcccccEEEEeCCccccc-hhhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC---c-hHHcCCCcC
Confidence 56789999999999999865 468899999999999999999887 8999999999999999988 3 469999999
Q ss_pred CeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecc
Q 003982 166 TTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKN 245 (782)
Q Consensus 166 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N 245 (782)
++|++++|.+++..+ +..+++|++|++++|.....++..-....|++|++++|.+..... +..+++|++|++++|
T Consensus 113 ~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~---~~~l~~L~~L~l~~n 187 (347)
T 4fmz_A 113 RELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTESKVKDVTP---IANLTDLYSLSLNYN 187 (347)
T ss_dssp SEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCGGGTTCTTCCEEECCSSCCCCCGG---GGGCTTCSEEECTTS
T ss_pred CEEECcCCcccCchh--hccCCceeEEECCCCCCcccccchhhCCCCcEEEecCCCcCCchh---hccCCCCCEEEccCC
Confidence 999999999988744 899999999999999776555553233678888888887654332 778899999999999
Q ss_pred cccCCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCC-CCCCCccEEEccCCcCCCCCCCCCC
Q 003982 246 QFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYP-LFPSKVQKVSLDHNNFCKNSSDAGK 324 (782)
Q Consensus 246 ~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~l~~N~~~~~~~~~~~ 324 (782)
++++..+ +..+++|+.|++++|++++..+ +..+++|++|++++|++++..+ ..+.+|++|++++|.++.+.
T Consensus 188 ~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~----- 259 (347)
T 4fmz_A 188 QIEDISP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDIN----- 259 (347)
T ss_dssp CCCCCGG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCG-----
T ss_pred ccccccc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcchhcCCCCCEEECCCCccCCCh-----
Confidence 9987655 7888999999999999986555 8888999999999999987655 24568999999999875532
Q ss_pred CCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEeccccccc
Q 003982 325 PCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLT 404 (782)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 404 (782)
.+..+++|++|++++|.+++. +.+..+++|++|+|++|+++
T Consensus 260 -------------------------------------~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~ 300 (347)
T 4fmz_A 260 -------------------------------------AVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLG 300 (347)
T ss_dssp -------------------------------------GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCC
T ss_pred -------------------------------------hHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCC
Confidence 345667999999999999975 56899999999999999999
Q ss_pred ccCCccCCCCCCCCeEecCCCcCCCCCC-CCCCCcceecCCCCCCC
Q 003982 405 GPIPDGLTKLASLQNLDVSNNNLSGKVP-DFGSNVKFTVSPGNPFI 449 (782)
Q Consensus 405 g~~p~~~~~l~~L~~L~ls~N~l~g~~p-~~~~~~~~~~~~~n~~~ 449 (782)
+..|..|..+++|+.|++++|++++.+| .....+....+.+|++.
T Consensus 301 ~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 301 NEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFANQVIK 346 (347)
T ss_dssp GGGHHHHHTCTTCSEEECCSSSCCCCGGGGGCTTCSEESSSCC---
T ss_pred CcChhHhhccccCCEEEccCCccccccChhhhhccceeehhhhccc
Confidence 9999999999999999999999999888 22367778888888863
No 77
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.98 E-value=1.3e-32 Score=298.82 Aligned_cols=190 Identities=17% Similarity=0.232 Sum_probs=162.3
Q ss_pred hcCCCccceeecccceEEEEE------EeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcC---CCCcceEEeEEEe
Q 003982 580 TDNFSEANILGRGGFGVVYGG------ELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR---HRHLVALLGYCIN 650 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~------~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~nI~~~~~~~~~ 650 (782)
.++|.+.+.||+|+||+||+| +..+++.||||++... ...++.+|++++++++ |+||+++++++..
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 467999999999999999999 3557889999999753 2457788888888886 9999999999999
Q ss_pred CCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECC--------
Q 003982 651 GSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-------- 722 (782)
Q Consensus 651 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~-------- 722 (782)
.+..++||||+++|+|.+++..........+++.+++.++.|++.||+|||+ .||+||||||+|||++.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC---
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCcccc
Confidence 9999999999999999999987655445679999999999999999999998 89999999999999998
Q ss_pred ---CCcEEEEeeccceecCCC-CceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 723 ---DMRAKVADFGLVKNAPDG-KYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 723 ---~~~~kL~DfG~a~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
++.+||+|||+|+..... ........+||+.|+|||++.+. .++.++||||+||+
T Consensus 216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~i 274 (365)
T 3e7e_A 216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNK---PWNYQIDYFGVAAT 274 (365)
T ss_dssp ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTC---CBSTHHHHHHHHHH
T ss_pred ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCC---CCCccccHHHHHHH
Confidence 899999999999765321 22233456799999999998875 35789999999986
No 78
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.98 E-value=1.5e-32 Score=297.42 Aligned_cols=190 Identities=26% Similarity=0.440 Sum_probs=165.5
Q ss_pred HHhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEE
Q 003982 578 QVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLL 656 (782)
Q Consensus 578 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l 656 (782)
.+.++|++.+.||+|+||.||+|.. .+++.||+|++..........+.+.+|++++++++||||+++++++.+.+..|+
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 4567899999999999999999954 578999999998766556667889999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCC---CcEEEEeecc
Q 003982 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD---MRAKVADFGL 733 (782)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~---~~~kL~DfG~ 733 (782)
||||+++|+|.+++.. ...+++.++..++.|++.||+|||+ .||+||||||+||+++.+ +.+||+|||+
T Consensus 106 v~e~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~ 177 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVA-----REFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGL 177 (362)
T ss_dssp EECCCCSCBHHHHHTT-----CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCc
Confidence 9999999999998864 3458999999999999999999999 899999999999999865 4599999999
Q ss_pred ceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 734 VKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 734 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+........ .....||+.|+|||++.+. .++.++||||+||+
T Consensus 178 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~i 219 (362)
T 2bdw_A 178 AIEVNDSEA--WHGFAGTPGYLSPEVLKKD---PYSKPVDIWACGVI 219 (362)
T ss_dssp CBCCTTCCS--CCCSCSCTTTCCHHHHTTC---CCCTHHHHHHHHHH
T ss_pred ceEecCCcc--cccCCCCccccCHHHHccC---CCCchhhHHHHHHH
Confidence 987764332 2345799999999998764 35678999999986
No 79
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.98 E-value=1.3e-32 Score=304.80 Aligned_cols=191 Identities=22% Similarity=0.364 Sum_probs=165.2
Q ss_pred HHhcCCCccceeecccceEEEEEE-eCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEE
Q 003982 578 QVTDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLL 656 (782)
Q Consensus 578 ~~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l 656 (782)
.+.++|++.+.||+|+||.||+|. ..+|+.||+|++..........+.+.+|++++++++||||+++++++.+++..++
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 456789999999999999999994 4678999999998766555567789999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEEC---CCCcEEEEeecc
Q 003982 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG---DDMRAKVADFGL 733 (782)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~---~~~~~kL~DfG~ 733 (782)
||||+++|+|.+.+.. ...+++.++..++.|++.||+|||+ .||+||||||+||+++ .++.+||+|||+
T Consensus 88 v~E~~~gg~L~~~i~~-----~~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~ 159 (444)
T 3soa_A 88 IFDLVTGGELFEDIVA-----REYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGL 159 (444)
T ss_dssp EECCCBCCBHHHHHHH-----CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSS
T ss_pred EEEeCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCce
Confidence 9999999999999876 2458999999999999999999999 8999999999999998 467899999999
Q ss_pred ceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 734 VKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 734 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|........ ......||+.|+|||++.+. .++.++||||+||+
T Consensus 160 a~~~~~~~~-~~~~~~gt~~Y~APE~l~~~---~~~~~~DIwSlGvi 202 (444)
T 3soa_A 160 AIEVEGEQQ-AWFGFAGTPGYLSPEVLRKD---PYGKPVDLWACGVI 202 (444)
T ss_dssp CBCCCTTCC-BCCCSCSCGGGCCHHHHTTC---CBCTHHHHHHHHHH
T ss_pred eEEecCCCc-eeecccCCcccCCHHHhcCC---CCCCccccHHHHHH
Confidence 987765332 22345799999999998764 35678999999986
No 80
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.98 E-value=1e-32 Score=300.49 Aligned_cols=189 Identities=23% Similarity=0.373 Sum_probs=161.5
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCC-hhhHHHHHHHHHHHHhc-CCCCcceEEeEEEeCCeEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLL 656 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~l 656 (782)
.++|++.++||+|+||.||+|+. .+++.||+|++++.... ....+.+.+|..+++++ +||||+++++++.+.+..|+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 46799999999999999999965 46789999999875432 22345688999999887 79999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeecccee
Q 003982 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (782)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~ 736 (782)
||||+++|+|..++... ..+++.++..++.|++.||+|||+ .||+||||||+|||++.++.+||+|||+|+.
T Consensus 131 V~E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~ 202 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202 (396)
T ss_dssp EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEcCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeee
Confidence 99999999999998763 358999999999999999999999 8999999999999999999999999999986
Q ss_pred cCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 737 APDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 737 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..... ......+||+.|+|||++.+. +++.++|+||+||+
T Consensus 203 ~~~~~-~~~~~~~gt~~Y~aPE~l~~~---~~~~~~DiwslGvl 242 (396)
T 4dc2_A 203 GLRPG-DTTSTFCGTPNYIAPEILRGE---DYGFSVDWWALGVL 242 (396)
T ss_dssp CCCTT-CCBCCCCBCGGGCCHHHHTTC---CBCTHHHHHHHHHH
T ss_pred cccCC-CccccccCCcccCCchhhcCC---CCChHHHHHHHHHH
Confidence 43322 123446899999999998875 45778999999986
No 81
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.98 E-value=4.4e-31 Score=294.41 Aligned_cols=313 Identities=18% Similarity=0.132 Sum_probs=258.2
Q ss_pred CCCcccCccccCCccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCC
Q 003982 77 GLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFP 156 (782)
Q Consensus 77 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p 156 (782)
+..+..+..++++++|++|++++|.+++. |.+..+++|++|+|++|+|++++ +..+++|++|+|++|++.. ++
T Consensus 29 ~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~~l~~l~~L~~L~Ls~n~l~~~~---~~~l~~L~~L~Ls~N~l~~---~~ 101 (457)
T 3bz5_A 29 EMQATDTISEEQLATLTSLDCHNSSITDM-TGIEKLTGLTKLICTSNNITTLD---LSQNTNLTYLACDSNKLTN---LD 101 (457)
T ss_dssp TCCTTSEEEHHHHTTCCEEECCSSCCCCC-TTGGGCTTCSEEECCSSCCSCCC---CTTCTTCSEEECCSSCCSC---CC
T ss_pred CcCcccccChhHcCCCCEEEccCCCcccC-hhhcccCCCCEEEccCCcCCeEc---cccCCCCCEEECcCCCCce---ee
Confidence 33445556788999999999999999986 58999999999999999999985 8899999999999999988 33
Q ss_pred cccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccc-cccchhhcccccCCCccccccccCCC
Q 003982 157 NELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAK-SDIQNLWMNDQQLGLSGTLDVLSGMT 235 (782)
Q Consensus 157 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~l~l~~~~~~~~~~~~~~~~l~ 235 (782)
+.++++|++|++++|++++. + +..+++|++|++++|++++ ++ +.. ..|+.|+++.|...... .+..++
T Consensus 102 --~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~---~~~~l~ 170 (457)
T 3bz5_A 102 --VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKL---DVTPQT 170 (457)
T ss_dssp --CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC---CCTTCT
T ss_pred --cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCccccc---ccccCC
Confidence 88999999999999999986 3 8999999999999999996 44 333 67899999988533222 477899
Q ss_pred CCcEEEeecccccCCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCCCCCCccEEEccCCcC
Q 003982 236 QLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPSKVQKVSLDHNNF 315 (782)
Q Consensus 236 ~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~l~~N~~ 315 (782)
+|++|++++|++++.+ +..+++|+.|++++|++++. .+..+++|+.|++++|++++.....+.+|+.|++++|++
T Consensus 171 ~L~~L~ls~n~l~~l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ip~~~l~~L~~L~l~~N~l 245 (457)
T 3bz5_A 171 QLTTLDCSFNKITELD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEIDVTPLTQLTYFDCSVNPL 245 (457)
T ss_dssp TCCEEECCSSCCCCCC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCCCCTTCTTCSEEECCSSCC
T ss_pred cCCEEECCCCccceec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccccCccccCCCCEEEeeCCcC
Confidence 9999999999999864 88999999999999999975 488999999999999999995434567899999999999
Q ss_pred CCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCe
Q 003982 316 CKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKN 395 (782)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 395 (782)
++++... +..+..-.....+|+.|++++|.+.+.+| ++++++|+.
T Consensus 246 ~~~~~~~---------------------------------l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~ 290 (457)
T 3bz5_A 246 TELDVST---------------------------------LSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKE 290 (457)
T ss_dssp SCCCCTT---------------------------------CTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCC
T ss_pred CCcCHHH---------------------------------CCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCE
Confidence 8765111 01111112223478899999999988887 578899999
Q ss_pred EecccccccccCCcc--------CCCCCCCCeEecCCCcCCCCCCCCC--CCcceecCCCCCCC
Q 003982 396 LYLQQNNLTGPIPDG--------LTKLASLQNLDVSNNNLSGKVPDFG--SNVKFTVSPGNPFI 449 (782)
Q Consensus 396 L~Ls~N~l~g~~p~~--------~~~l~~L~~L~ls~N~l~g~~p~~~--~~~~~~~~~~n~~~ 449 (782)
|+|++|++.+.+|.. +..+++|+.|++++|+|+|. | +. ..+....+.+|.+.
T Consensus 291 L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l-~-l~~l~~L~~L~l~~N~l~ 352 (457)
T 3bz5_A 291 LDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL-D-VSHNTKLKSLSCVNAHIQ 352 (457)
T ss_dssp CCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC-C-CTTCTTCSEEECCSSCCC
T ss_pred EECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc-c-cccCCcCcEEECCCCCCC
Confidence 999999988877753 56678999999999999995 4 43 57777888888875
No 82
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.98 E-value=1.5e-32 Score=291.70 Aligned_cols=186 Identities=28% Similarity=0.411 Sum_probs=162.3
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCC-hhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
.++|++.+.||+|+||.||+|+. .+|+.||+|++++.... ....+.+.+|+.+++.++||||+++++++.+....|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 36799999999999999999965 47899999999764321 23457788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++..
T Consensus 85 ~e~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~ 156 (318)
T 1fot_A 85 MDYIEGGELFSLLRK-----SQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYV 156 (318)
T ss_dssp ECCCCSCBHHHHHHH-----TSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEEC
T ss_pred EeCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceec
Confidence 999999999999976 2458999999999999999999998 89999999999999999999999999999876
Q ss_pred CCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 738 PDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.... ...+||+.|+|||++.+. +++.++|+||+||+
T Consensus 157 ~~~~----~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~i 192 (318)
T 1fot_A 157 PDVT----YTLCGTPDYIAPEVVSTK---PYNKSIDWWSFGIL 192 (318)
T ss_dssp SSCB----CCCCSCTTTCCHHHHTTC---CBCTTHHHHHHHHH
T ss_pred CCcc----ccccCCccccCHhHhcCC---CCCcccchhhhHHH
Confidence 5432 235799999999998764 45678899999986
No 83
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.98 E-value=2.1e-32 Score=295.20 Aligned_cols=194 Identities=21% Similarity=0.352 Sum_probs=163.9
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccC---ChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM---GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER 654 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~ 654 (782)
+.++|++.+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|+++++.++||||+++++++.+.+..
T Consensus 22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 101 (351)
T 3c0i_A 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 101 (351)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 346799999999999999999954 5789999999965321 112467899999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCc---EEEEee
Q 003982 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR---AKVADF 731 (782)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~---~kL~Df 731 (782)
|+||||+++++|.+.+...... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++. +||+||
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Df 177 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADA-GFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGF 177 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCC
T ss_pred EEEEeCCCCCCHHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecC
Confidence 9999999999999888764432 3458999999999999999999999 89999999999999987654 999999
Q ss_pred ccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 732 GLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 732 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|+++....... .....+||+.|+|||++.+. .++.++||||+||+
T Consensus 178 g~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~i 222 (351)
T 3c0i_A 178 GVAIQLGESGL-VAGGRVGTPHFMAPEVVKRE---PYGKPVDVWGCGVI 222 (351)
T ss_dssp TTCEECCTTSC-BCCCCCSCGGGCCHHHHTTC---CBCTHHHHHHHHHH
T ss_pred cceeEecCCCe-eecCCcCCcCccCHHHHcCC---CCCchHhhHHHHHH
Confidence 99988765432 22345799999999998765 34678999999986
No 84
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.98 E-value=2.9e-32 Score=291.94 Aligned_cols=193 Identities=26% Similarity=0.388 Sum_probs=160.0
Q ss_pred HhcCCCccceeecccceEEEEEEeC-CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCC-----
Q 003982 579 VTDNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS----- 652 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~----- 652 (782)
+.++|++.+.||+|+||.||+|... +++.||||+++... .....+.+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 4578999999999999999999664 79999999997544 2345678999999999999999999999986643
Q ss_pred ----------------------------------------------------eEEEEEEccCCCCHHHHHHhhccCCCCC
Q 003982 653 ----------------------------------------------------ERLLVYEYMPRGTLAQHLFEWHDHGYTP 680 (782)
Q Consensus 653 ----------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~ 680 (782)
..++||||+++++|.+++..... ...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~ 160 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS--LED 160 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS--GGG
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC--ccc
Confidence 37999999999999999976322 234
Q ss_pred CCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecCCCCc-----------eeeeccc
Q 003982 681 LTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY-----------SVETRLA 749 (782)
Q Consensus 681 l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~~~~~-----------~~~~~~~ 749 (782)
.++..++.++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++....... .......
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccC
Confidence 5777899999999999999999 8999999999999999999999999999988765421 1223356
Q ss_pred ccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 750 GTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 750 gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
||+.|+|||++.+. .++.++||||+|++
T Consensus 238 gt~~y~aPE~~~~~---~~~~~~Di~slG~i 265 (332)
T 3qd2_B 238 GTKLYMSPEQIHGN---NYSHKVDIFSLGLI 265 (332)
T ss_dssp -CGGGSCHHHHHCC---CCCTHHHHHHHHHH
T ss_pred CCcCccChHHhcCC---CCcchhhHHHHHHH
Confidence 99999999998764 45778999999986
No 85
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.98 E-value=2.5e-32 Score=293.36 Aligned_cols=188 Identities=24% Similarity=0.372 Sum_probs=162.7
Q ss_pred cCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCC-hhhHHHHHHHHHHHHhc-CCCCcceEEeEEEeCCeEEEE
Q 003982 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~lv 657 (782)
++|++.+.||+|+||.||+|+. .+++.||+|++.+.... ....+.+.+|.++++++ +||||+++++++.+.+..|+|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 5789999999999999999965 46889999999876432 34567788999999988 899999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
|||+++|+|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++..
T Consensus 89 ~e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 160 (345)
T ss_dssp ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred EeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccc
Confidence 9999999999998763 358999999999999999999999 89999999999999999999999999999864
Q ss_pred CCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 738 PDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..... .....+||+.|+|||++.+. +++.++|+||+||+
T Consensus 161 ~~~~~-~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~i 199 (345)
T 3a8x_A 161 LRPGD-TTSTFCGTPNYIAPEILRGE---DYGFSVDWWALGVL 199 (345)
T ss_dssp CCTTC-CBCCCCSCGGGCCHHHHTTC---CBCTHHHHHHHHHH
T ss_pred cCCCC-cccccCCCccccCccccCCC---CCChHHhHHHHHHH
Confidence 33221 22346899999999998765 45778999999986
No 86
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.98 E-value=2.3e-32 Score=289.85 Aligned_cols=191 Identities=29% Similarity=0.373 Sum_probs=160.0
Q ss_pred HhcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 658 (782)
..++|++.+.||+|+||+||+|...+++.||+|++..........+.+.+|++++++++||||+++++++.++...++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 35789999999999999999998888999999999766544445678899999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecC
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~ 738 (782)
||++ +++.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++...
T Consensus 99 e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 170 (311)
T 3niz_A 99 EFME-KDLKKVLDEN----KTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFG 170 (311)
T ss_dssp ECCS-EEHHHHHHTC----TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred cCCC-CCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence 9997 5888887652 2458999999999999999999999 899999999999999999999999999998775
Q ss_pred CCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 739 DGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.... ......||+.|+|||++.+. ..++.++||||+||+
T Consensus 171 ~~~~-~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~i 209 (311)
T 3niz_A 171 IPVR-SYTHEVVTLWYRAPDVLMGS--KKYSTSVDIWSIGCI 209 (311)
T ss_dssp SCCC----CCCCCCTTCCHHHHTTC--CSCCTHHHHHHHHHH
T ss_pred CCcc-cccCCcccCCcCCHHHhcCC--CCCCchHHhHHHHHH
Confidence 4322 22335789999999988653 134678999999986
No 87
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.98 E-value=3.6e-32 Score=285.79 Aligned_cols=189 Identities=22% Similarity=0.343 Sum_probs=161.9
Q ss_pred cCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEEE
Q 003982 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 659 (782)
++|++.+.||+|+||+||+|.. .+++.||||++..........+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 5799999999999999999965 568999999998766555566889999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecCC
Q 003982 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (782)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~~ 739 (782)
|+++ ++.+.+... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++....
T Consensus 82 ~~~~-~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSC----NGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp CCSE-EHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred cCCC-CHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 9965 666666542 2458999999999999999999999 8999999999999999999999999999987654
Q ss_pred CCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 740 GKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
... ......||+.|+|||++.+. ..++.++||||+||+
T Consensus 154 ~~~-~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~i 191 (292)
T 3o0g_A 154 PVR-CYSAEVVTLWYRPPDVLFGA--KLYSTSIDMWSAGCI 191 (292)
T ss_dssp CCS-CCCSCCSCGGGCCHHHHTTC--SCCCTHHHHHHHHHH
T ss_pred ccc-cccCCccccCCcChHHHcCC--CCcCchHHHHHHHHH
Confidence 322 22345789999999988664 124678999999986
No 88
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98 E-value=4.9e-32 Score=288.45 Aligned_cols=187 Identities=21% Similarity=0.336 Sum_probs=162.9
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
+.++|++.+.||+|+||.||+|.. .+++.||+|++.... .....+.+|+++++.++||||+++++++.+.+..++|
T Consensus 3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 79 (321)
T 1tki_A 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG---TDQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT---HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc---ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence 357899999999999999999955 568899999987542 4456789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECC--CCcEEEEeeccce
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD--DMRAKVADFGLVK 735 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~--~~~~kL~DfG~a~ 735 (782)
|||+++|+|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||+++. ++.+||+|||+++
T Consensus 80 ~e~~~g~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~ 152 (321)
T 1tki_A 80 FEFISGLDIFERINTS----AFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQAR 152 (321)
T ss_dssp ECCCCCCBHHHHHTSS----SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCE
T ss_pred EEeCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCe
Confidence 9999999999998541 2358999999999999999999999 89999999999999987 7899999999998
Q ss_pred ecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 736 NAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 736 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
....... .....||+.|+|||++.+. .++.++||||+|++
T Consensus 153 ~~~~~~~--~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~i 192 (321)
T 1tki_A 153 QLKPGDN--FRLLFTAPEYYAPEVHQHD---VVSTATDMWSLGTL 192 (321)
T ss_dssp ECCTTCE--EEEEESCGGGSCHHHHTTC---EECHHHHHHHHHHH
T ss_pred ECCCCCc--cccccCChhhcCcHHhcCC---CCCchhhHHHHHHH
Confidence 8765432 2345789999999998775 35778999999986
No 89
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.98 E-value=2e-32 Score=293.71 Aligned_cols=191 Identities=26% Similarity=0.407 Sum_probs=162.8
Q ss_pred HHhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccC-ChhhHHHHHHHHHHHHhc-CCCCcceEEeEEEeCCeE
Q 003982 578 QVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSER 654 (782)
Q Consensus 578 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~ 654 (782)
...++|.+.+.||+|+||.||+|+. .+++.||||++++... .....+.+..|.++++.+ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 3467899999999999999999965 4689999999976432 123456788899999877 899999999999999999
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccc
Q 003982 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV 734 (782)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a 734 (782)
|+||||+++|+|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+|
T Consensus 94 ~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a 165 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMC 165 (345)
T ss_dssp EEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhh
Confidence 9999999999999999763 358999999999999999999999 89999999999999999999999999999
Q ss_pred eecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 735 KNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 735 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+....... .....+||+.|+|||++.+. +++.++|+||+||+
T Consensus 166 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~i 207 (345)
T 1xjd_A 166 KENMLGDA-KTNTFCGTPDYIAPEILLGQ---KYNHSVDWWSFGVL 207 (345)
T ss_dssp BCCCCTTC-CBCCCCSCGGGCCHHHHTTC---CBCTHHHHHHHHHH
T ss_pred hhcccCCC-cccCCCCCcccCChhhhcCC---CCCChhhhHHHHHH
Confidence 86543222 22446899999999998775 45778999999986
No 90
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.98 E-value=8e-32 Score=287.01 Aligned_cols=195 Identities=25% Similarity=0.396 Sum_probs=166.7
Q ss_pred ccHHHHHHHhcC----------CCccceeecccceEEEEEEeC-CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCC
Q 003982 571 ISIEVLRQVTDN----------FSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHR 639 (782)
Q Consensus 571 ~~~~~l~~~~~~----------y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 639 (782)
++.++++.+.+. |+..+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 25 VTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--CCSHHHHHHHHHHHTTCCCT
T ss_pred CcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc--hhHHHHHHHHHHHHHhCCCC
Confidence 455666555543 777889999999999999664 79999999997654 34567789999999999999
Q ss_pred CcceEEeEEEeCCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEE
Q 003982 640 HLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719 (782)
Q Consensus 640 nI~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIl 719 (782)
||+++++++...+..++||||+++++|.+++.. ..+++.++..++.|++.||+|||+ .||+||||||+||+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~------~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIl 173 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ------VRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSIL 173 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEE
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEE
Confidence 999999999999999999999999999998853 358999999999999999999999 89999999999999
Q ss_pred ECCCCcEEEEeeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 720 IGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 720 l~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
++.++.+||+|||++........ ......||+.|+|||++.+. .++.++||||+|++
T Consensus 174 l~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~slG~i 230 (321)
T 2c30_A 174 LTLDGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRS---LYATEVDIWSLGIM 230 (321)
T ss_dssp ECTTCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTC---CBCTHHHHHHHHHH
T ss_pred ECCCCcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCC---CCCchhhHHHHHHH
Confidence 99999999999999987754322 22345799999999998764 34678999999986
No 91
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.97 E-value=2.4e-32 Score=294.02 Aligned_cols=185 Identities=29% Similarity=0.362 Sum_probs=162.8
Q ss_pred cCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccC-ChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEE
Q 003982 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 658 (782)
++|++.+.||+|+||.||+|+. .+++.||+|++.+... .....+.+.+|+++++.++||||+++++++.+....|+||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 6799999999999999999965 4789999999976432 1235678899999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecC
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~ 738 (782)
||+++|+|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++...
T Consensus 121 e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~ 192 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192 (350)
T ss_dssp ECCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred cCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceecc
Confidence 999999999999763 358999999999999999999999 899999999999999999999999999998775
Q ss_pred CCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 739 DGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
... ...+||+.|+|||++.+. +++.++|+||+||+
T Consensus 193 ~~~----~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~i 227 (350)
T 1rdq_E 193 GRT----WTLCGTPEALAPEIILSK---GYNKAVDWWALGVL 227 (350)
T ss_dssp SCB----CCCEECGGGCCHHHHTTC---CBCTHHHHHHHHHH
T ss_pred CCc----ccccCCccccCHHHhcCC---CCCCcCCEecccHh
Confidence 432 235799999999998765 45778999999986
No 92
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.97 E-value=2.4e-32 Score=289.34 Aligned_cols=192 Identities=28% Similarity=0.486 Sum_probs=156.6
Q ss_pred HhcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 658 (782)
..++|++.+.||+|+||+||+|+. +++.||||++..........+++.+|++++++++||||+++++++.+.+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 356899999999999999999977 6889999999877655666788999999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eEEcCCCCCCEEECCCCcEEEEeecccee
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQS--FIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~--ivHrDikp~NIll~~~~~~kL~DfG~a~~ 736 (782)
||+++|+|.+++..... ...+++.++..++.|++.||+|||+ .| |+||||||+||+++.++.+||+|||+++.
T Consensus 114 e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 188 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGA--REQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188 (309)
T ss_dssp ECCTTCBHHHHHHSTTH--HHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCCC----
T ss_pred ecCCCCcHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCCCCCcc
Confidence 99999999999975211 1238999999999999999999998 78 99999999999999999999999999976
Q ss_pred cCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 737 APDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 737 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..... .......||+.|+|||++.+. ..+.++||||+|++
T Consensus 189 ~~~~~-~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~i 228 (309)
T 3p86_A 189 KASTF-LSSKSAAGTPEWMAPEVLRDE---PSNEKSDVYSFGVI 228 (309)
T ss_dssp --------------CCTTSCHHHHTTC---CCCTTHHHHHHHHH
T ss_pred ccccc-cccccCCCCccccChhhhcCC---CCCchhhHHHHHHH
Confidence 54432 122345789999999998765 34678999999986
No 93
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.97 E-value=8e-33 Score=295.01 Aligned_cols=198 Identities=38% Similarity=0.712 Sum_probs=168.2
Q ss_pred HHHHHHhcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCe
Q 003982 574 EVLRQVTDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE 653 (782)
Q Consensus 574 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~ 653 (782)
.++....++|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 32 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 109 (321)
T 2qkw_B 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES--SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE 109 (321)
T ss_dssp SCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC--SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTC
T ss_pred HHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCe
Confidence 33445678999999999999999999998889999999987654 3456789999999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeecc
Q 003982 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGL 733 (782)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~ 733 (782)
.++||||+++|+|.+++..... ....+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 110 MILIYKYMENGNLKRHLYGSDL-PTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CEEEEECCTTCBTGGGSSSSCC-CSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred EEEEEEcCCCCcHHHHHhccCC-CccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeeccc
Confidence 9999999999999998865322 12458999999999999999999999 8999999999999999999999999999
Q ss_pred ceecCCCCc-eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 734 VKNAPDGKY-SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 734 a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
++....... .......||+.|+|||++.+. .++.++||||+|++
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~i 230 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKG---RLTEKSDVYSFGVV 230 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHC---BCCTHHHHHHHHHH
T ss_pred ccccccccccccccccCCCccccCHHHhcCC---CCCcccchHhHHHH
Confidence 987543221 122334689999999987654 35678999999986
No 94
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.97 E-value=4.2e-32 Score=294.88 Aligned_cols=194 Identities=29% Similarity=0.503 Sum_probs=163.8
Q ss_pred hcCCCccceeecccceEEEEEEe--------CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhc-CCCCcceEEeEEEe
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL--------PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCIN 650 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~ 650 (782)
.++|++.+.||+|+||.||+|.. .++..||||+++... .....+++.+|+++++++ +||||+++++++.+
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC-BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc-CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 46799999999999999999964 235679999997643 345667899999999999 89999999999999
Q ss_pred CCeEEEEEEccCCCCHHHHHHhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEE
Q 003982 651 GSERLLVYEYMPRGTLAQHLFEWHDH-----------GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719 (782)
Q Consensus 651 ~~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIl 719 (782)
.+..|+||||+++|+|.+++...... ....+++.++..++.|++.||+|||+ .||+||||||+||+
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIl 235 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVL 235 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEE
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEE
Confidence 99999999999999999999874321 12358999999999999999999999 89999999999999
Q ss_pred ECCCCcEEEEeeccceecCCCCc-eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 720 IGDDMRAKVADFGLVKNAPDGKY-SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 720 l~~~~~~kL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
++.++.+||+|||+++....... .......+|+.|+|||++.+. .++.++||||+||+
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~DvwslG~i 294 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR---VYTHQSDVWSFGVL 294 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTC---CCCHHHHHHHHHHH
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCC---CCCcHHHHHHHHHH
Confidence 99999999999999987654332 122334578899999988764 45788999999986
No 95
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.97 E-value=3.4e-32 Score=290.71 Aligned_cols=188 Identities=27% Similarity=0.435 Sum_probs=161.9
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCC-hhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
.++|.+.+.||+|+||.||+|.. .+++.||||++...... ......+.+|+++++.++||||+++++++.+++..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46899999999999999999964 67899999999754321 12346789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
|||+ +|+|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||++++++.+||+|||++...
T Consensus 88 ~E~~-~g~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~ 158 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEK-----KRMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIM 158 (336)
T ss_dssp ECCC-CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTT
T ss_pred EECC-CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceec
Confidence 9999 78999988763 458999999999999999999999 89999999999999999999999999999876
Q ss_pred CCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 738 PDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..... ....+||+.|+|||++.+.. ..+.++||||+||+
T Consensus 159 ~~~~~--~~~~~gt~~y~aPE~~~~~~--~~~~~~DiwslG~i 197 (336)
T 3h4j_B 159 TDGNF--LKTSCGSPNYAAPEVINGKL--YAGPEVDVWSCGIV 197 (336)
T ss_dssp TTSBT--TCCCTTSTTTSCGGGSCCSG--GGCHHHHHHHHHHH
T ss_pred cCCcc--cccccCCcCcCCHHHHcCCC--CCCCccchhHHHHH
Confidence 55432 23357999999999988752 23678999999986
No 96
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.97 E-value=7.8e-32 Score=287.71 Aligned_cols=189 Identities=28% Similarity=0.426 Sum_probs=163.0
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCCh----hhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCe
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGN----KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE 653 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~ 653 (782)
+.++|++.+.||+|+||.||+|.. .+++.||+|++....... ...+.+.+|++++++++||||+++++++.+...
T Consensus 9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 88 (326)
T 2y0a_A 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88 (326)
T ss_dssp HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 346799999999999999999965 468999999997654321 246789999999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCC----cEEEE
Q 003982 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM----RAKVA 729 (782)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~----~~kL~ 729 (782)
.++||||+++++|.+++.. ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++ .+||+
T Consensus 89 ~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~ 160 (326)
T 2y0a_A 89 VILILELVAGGELFDFLAE-----KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKII 160 (326)
T ss_dssp EEEEEECCCSCBHHHHHTT-----SSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEEC
T ss_pred EEEEEEcCCCCCHHHHHHh-----cCCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEE
Confidence 9999999999999999854 3468999999999999999999999 8999999999999999887 89999
Q ss_pred eeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 730 DFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 730 DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|||+++....... .....||+.|+|||++.+. .++.++||||+||+
T Consensus 161 Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~i 206 (326)
T 2y0a_A 161 DFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVI 206 (326)
T ss_dssp CCTTCEECCTTSC--CCCCCSCTTTCCHHHHTTC---CCCTHHHHHHHHHH
T ss_pred ECCCCeECCCCCc--cccccCCcCcCCceeecCC---CCCcHHHHHHHHHH
Confidence 9999988754331 2345799999999998754 35678999999986
No 97
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.97 E-value=7e-32 Score=279.83 Aligned_cols=188 Identities=29% Similarity=0.441 Sum_probs=164.7
Q ss_pred hcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 659 (782)
.++|++.+.||+|+||.||+|+..++..||+|+++... ...+++.+|++++++++||||+++++++.+....++|||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS---MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT---BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC---CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 46799999999999999999988888899999997654 234679999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecCC
Q 003982 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (782)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~~ 739 (782)
|+++++|.+++.... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++.....
T Consensus 84 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 156 (268)
T 3sxs_A 84 YISNGCLLNYLRSHG----KGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156 (268)
T ss_dssp CCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCT
T ss_pred ccCCCcHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecch
Confidence 999999999997642 348999999999999999999999 8999999999999999999999999999988766
Q ss_pred CCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 740 GKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..........+|+.|+|||++.+. .++.++|+||+|++
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 194 (268)
T 3sxs_A 157 DQYVSSVGTKFPVKWSAPEVFHYF---KYSSKSDVWAFGIL 194 (268)
T ss_dssp TCEEECCSCCCCGGGCCHHHHHHS---EEETTHHHHHHHHH
T ss_pred hhhhcccCCCcCcccCCHHHHhcc---CCchhhhhHHHHHH
Confidence 554444445577889999988654 34678999999986
No 98
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.97 E-value=3.2e-32 Score=293.03 Aligned_cols=190 Identities=25% Similarity=0.338 Sum_probs=162.6
Q ss_pred HhcCCCccceeecccceEEEEEEeC-CCcEEEEEEeccccC-ChhhHHHHHHHHHHHHhc-CCCCcceEEeEEEeCCeEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERL 655 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~ 655 (782)
..++|++.+.||+|+||.||+|+.. +++.||||++++... .....+.+.+|.++++.+ +||+|+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3578999999999999999999664 578999999976532 123557788999999988 7999999999999999999
Q ss_pred EEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccce
Q 003982 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (782)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~ 735 (782)
+||||+++|+|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+|+
T Consensus 98 lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~ 169 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK 169 (353)
T ss_dssp EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCccc
Confidence 999999999999999763 358999999999999999999999 899999999999999999999999999998
Q ss_pred ecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 736 NAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 736 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
....... .....+||+.|+|||++.+. +++.++|+||+||+
T Consensus 170 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~i 210 (353)
T 2i0e_A 170 ENIWDGV-TTKTFCGTPDYIAPEIIAYQ---PYGKSVDWWAFGVL 210 (353)
T ss_dssp CCCCTTC-CBCCCCSCGGGCCHHHHTTC---CBSTHHHHHHHHHH
T ss_pred ccccCCc-ccccccCCccccChhhhcCC---CcCCcccccchHHH
Confidence 6433221 22346799999999998765 45778999999986
No 99
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.97 E-value=7.2e-31 Score=306.90 Aligned_cols=325 Identities=17% Similarity=0.191 Sum_probs=238.7
Q ss_pred CEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEecc
Q 003982 67 RVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLS 145 (782)
Q Consensus 67 ~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 145 (782)
+++.|+|++|+|++..+.+|.++++|++|+|++|+|++.++ .|.++++|++|+|++|+|+++++..|+++++|++|+|+
T Consensus 77 ~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls 156 (635)
T 4g8a_A 77 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVA 156 (635)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccc
Confidence 78999999999998878889999999999999999999887 69999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCC-------------------------------------
Q 003982 146 DNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSN------------------------------------- 188 (782)
Q Consensus 146 ~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~------------------------------------- 188 (782)
+|++... ..|..+..+++|++|+|++|+|++..+..|..+.+
T Consensus 157 ~N~l~~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~ 235 (635)
T 4g8a_A 157 HNLIQSF-KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNF 235 (635)
T ss_dssp SSCCCCC-CCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCC
T ss_pred cCccccC-CCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhccc
Confidence 9999763 36788999999999999999988776655433221
Q ss_pred --------------------------------------------------------------------------------
Q 003982 189 -------------------------------------------------------------------------------- 188 (782)
Q Consensus 189 -------------------------------------------------------------------------------- 188 (782)
T Consensus 236 ~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 315 (635)
T 4g8a_A 236 DSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVS 315 (635)
T ss_dssp SSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEES
T ss_pred ccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccc
Confidence
Q ss_pred --------------CcEEEcccCcCCCCCCccc--------------------cccccchhhcccccCCCccc-------
Q 003982 189 --------------LQNLRLSYNNFTGSLPASF--------------------AKSDIQNLWMNDQQLGLSGT------- 227 (782)
Q Consensus 189 --------------L~~L~Ls~N~l~~~~p~~~--------------------~~~~l~~l~l~~~~~~~~~~------- 227 (782)
|+.|++++|.+.+..+..+ ....++.++++.|.+...+.
T Consensus 316 ~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~ 395 (635)
T 4g8a_A 316 VTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFG 395 (635)
T ss_dssp CEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHS
T ss_pred cccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchhh
Confidence 2223333332221111000 00234455555555432221
Q ss_pred -----------------cccccCCCCCcEEEeecccccCCCC--CCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEE
Q 003982 228 -----------------LDVLSGMTQLRQVWLHKNQFTGPIP--DLSKCESLFDLSLRDNQLTGVVPASVISLPALLNIS 288 (782)
Q Consensus 228 -----------------~~~~~~l~~L~~L~L~~N~l~~~~~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 288 (782)
...+..+++|+.++++.|++....+ .+..+++++.++++.|++.+..+..+..++.|+.|+
T Consensus 396 ~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~ 475 (635)
T 4g8a_A 396 TISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 475 (635)
T ss_dssp CSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEE
T ss_pred hhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhh
Confidence 1223445555555665555554333 255566666666666666666666666666666666
Q ss_pred ccCCcccC-CCCCC---CCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccc
Q 003982 289 LQNNKLQG-PYPLF---PSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTC 364 (782)
Q Consensus 289 l~~N~l~~-~~~~~---~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 364 (782)
+++|++.+ ..|.. +.+|+.|+|++|+++++. |..+.
T Consensus 476 Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~----------------------------------------~~~f~ 515 (635)
T 4g8a_A 476 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLS----------------------------------------PTAFN 515 (635)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEEC----------------------------------------TTTTT
T ss_pred hhhcccccccCchhhhhccccCEEECCCCccCCcC----------------------------------------hHHHc
Confidence 66665432 23332 245666666666665443 56677
Q ss_pred cCCceeEEEccCcccccccCccccccccCCeEecccccccccCCccCCCC-CCCCeEecCCCcCCCCCC
Q 003982 365 SQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKL-ASLQNLDVSNNNLSGKVP 432 (782)
Q Consensus 365 ~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l-~~L~~L~ls~N~l~g~~p 432 (782)
.+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+ ++|+.|+|++|++++...
T Consensus 516 ~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 516 SLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp TCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 88999999999999999999999999999999999999999999999998 689999999999998655
No 100
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.97 E-value=2.6e-32 Score=286.27 Aligned_cols=189 Identities=26% Similarity=0.364 Sum_probs=158.8
Q ss_pred cCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEEEc
Q 003982 581 DNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 660 (782)
++|++.+.||+|+||.||+|...+++.||+|++..........+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 57999999999999999999878899999999976554344457889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecCCC
Q 003982 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (782)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~~~ 740 (782)
+++ +|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~-~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (288)
T 1ob3_A 82 LDQ-DLKKLLDVC----EGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153 (288)
T ss_dssp CSE-EHHHHHHTS----TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred cCC-CHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence 975 898888652 2458999999999999999999999 89999999999999999999999999999876532
Q ss_pred CceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 741 KYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.. ......||+.|+|||++.+. ..++.++||||+|++
T Consensus 154 ~~-~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~i 190 (288)
T 1ob3_A 154 VR-KYTHEIVTLWYRAPDVLMGS--KKYSTTIDIWSVGCI 190 (288)
T ss_dssp ---------CCCTTCCHHHHTTC--CSCCTHHHHHHHHHH
T ss_pred cc-ccccccccccccCchheeCC--CCCCcHHHHHHHHHH
Confidence 21 22334689999999988653 134678999999986
No 101
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.97 E-value=4.8e-32 Score=289.50 Aligned_cols=189 Identities=26% Similarity=0.411 Sum_probs=152.1
Q ss_pred hcCCCccceeecccceEEEEEEe----CCCcEEEEEEeccccCC--hhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCe
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL----PDGTKIAVKRMESNTMG--NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE 653 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~ 653 (782)
.++|++.+.||+|+||.||+|+. .+++.||+|++++.... ......+.+|++++++++||||+++++++.+.+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 36799999999999999999965 47899999999865421 2345668899999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeecc
Q 003982 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGL 733 (782)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~ 733 (782)
.|+||||+++++|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 167 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLERE-----GIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGL 167 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSC
T ss_pred EEEEEeCCCCCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCc
Confidence 99999999999999999762 358999999999999999999999 8999999999999999999999999999
Q ss_pred ceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 734 VKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 734 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
++....... .....+||+.|+|||++.+. +++.++|+||+|++
T Consensus 168 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~i 210 (327)
T 3a62_A 168 CKESIHDGT-VTHTFCGTIEYMAPEILMRS---GHNRAVDWWSLGAL 210 (327)
T ss_dssp C-----------CTTSSCCTTSCHHHHTTS---CCCTHHHHHHHHHH
T ss_pred ccccccCCc-cccccCCCcCccCHhhCcCC---CCCCcccchhHHHH
Confidence 976543221 22345799999999998764 34678999999986
No 102
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.97 E-value=9.4e-32 Score=286.71 Aligned_cols=188 Identities=27% Similarity=0.434 Sum_probs=159.3
Q ss_pred hcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCC----eEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS----ERL 655 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~----~~~ 655 (782)
.++|++.+.||+|+||.||+|+.. ++.||||++.... .....+++|+.++++++||||+++++++.+.. ..+
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 98 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD---KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW 98 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc---hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence 367999999999999999999874 7999999996543 34456677999999999999999999998754 369
Q ss_pred EEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC----------CeEEcCCCCCCEEECCCCc
Q 003982 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQ----------SFIHRDLKPSNILIGDDMR 725 (782)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~----------~ivHrDikp~NIll~~~~~ 725 (782)
+||||+++|+|.+++.. ..+++.++..++.|++.||+|||+ . ||+||||||+||+++.++.
T Consensus 99 lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~al~~LH~---~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~ 169 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKA------NVVSWNELCHIAETMARGLAYLHE---DIPGLKDGHKPAISHRDIKSKNVLLKNNLT 169 (322)
T ss_dssp EEEECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHTC---CEEEETTEEECEEECSCCSGGGEEECTTCC
T ss_pred EEEecCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHh---hccccccccCCCEEeCCCChHhEEECCCCe
Confidence 99999999999999965 348999999999999999999998 6 9999999999999999999
Q ss_pred EEEEeeccceecCCCCce-eeecccccccccCccccccc--hhhhHHHHHHHHHhccc
Q 003982 726 AKVADFGLVKNAPDGKYS-VETRLAGTFGYLAPEYAGKH--WMILCQMTGLIWLHGSV 780 (782)
Q Consensus 726 ~kL~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~--~~~~~~~~~dvws~Gvv 780 (782)
+||+|||+|+........ ......||+.|+|||++.+. ....++.++||||+|++
T Consensus 170 ~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~i 227 (322)
T 3soc_A 170 ACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLV 227 (322)
T ss_dssp EEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHH
T ss_pred EEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHH
Confidence 999999999876553322 22335799999999998763 12356789999999986
No 103
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.97 E-value=3.1e-32 Score=282.62 Aligned_cols=187 Identities=28% Similarity=0.465 Sum_probs=162.9
Q ss_pred cCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEEEc
Q 003982 581 DNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 660 (782)
++|++.+.||+|+||.||+|...+++.||+|++.... ...+++.+|++++++++||||+++++++.+++..++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA---MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS---BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc---cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 5788999999999999999988889999999998654 2346799999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecCCC
Q 003982 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (782)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~~~ 740 (782)
+++++|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~~~~L~~~l~~~----~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 87 MEHGCLSDYLRTQ----RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp CTTCBHHHHHHTT----TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred CCCCcHHHHHHhc----CcccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEecccccccccccc
Confidence 9999999998652 2458999999999999999999999 89999999999999999999999999999876553
Q ss_pred CceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 741 KYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.........+|+.|+|||++.+. .++.++|+||+|++
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~ 196 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFS---RYSSKSDVWSFGVL 196 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred ccccccCcccccccCCHHHhcCC---CCCchhhhHHHHHH
Confidence 33333344578899999988654 45778999999986
No 104
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.97 E-value=6.4e-32 Score=284.80 Aligned_cols=191 Identities=28% Similarity=0.457 Sum_probs=155.8
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCCh------------------------hhHHHHHHHHHHHH
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGN------------------------KGLSEFQAEIAVLT 634 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~------------------------~~~~~~~~E~~~l~ 634 (782)
.++|++.+.||+|+||.||+|.. .+++.||||++....... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 36899999999999999999954 578899999997653211 12356899999999
Q ss_pred hcCCCCcceEEeEEEe--CCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcC
Q 003982 635 KVRHRHLVALLGYCIN--GSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRD 712 (782)
Q Consensus 635 ~l~h~nI~~~~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrD 712 (782)
+++||||+++++++.+ .+..++||||+++++|.+++. ..++++.++..++.|++.||+|||+ .||+|||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~D 162 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT------LKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRD 162 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC------SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccC
Confidence 9999999999999987 568899999999999987542 2468999999999999999999999 8999999
Q ss_pred CCCCCEEECCCCcEEEEeeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 713 LKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 713 ikp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|||+||+++.++.+||+|||+++....... ......||+.|+|||++.+........++||||+|++
T Consensus 163 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~ 229 (298)
T 2zv2_A 163 IKPSNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVT 229 (298)
T ss_dssp CCGGGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHH
T ss_pred CCHHHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHH
Confidence 999999999999999999999987765432 2234579999999999876421123678999999986
No 105
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.97 E-value=4.8e-32 Score=288.88 Aligned_cols=191 Identities=24% Similarity=0.374 Sum_probs=160.0
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
+.++|++.+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 83 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc-cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 357899999999999999999965 4789999999975432 22346789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
|||+++|+|.+++.. ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 155 (323)
T 3tki_A 84 LEYCSGGELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF 155 (323)
T ss_dssp EECCTTEEGGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEcCCCCcHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeecccee
Confidence 999999999998854 3458999999999999999999999 89999999999999999999999999999876
Q ss_pred CCCCc-eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 738 PDGKY-SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 738 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..... .......||+.|+|||++.+. .....++||||+|++
T Consensus 156 ~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwslG~i 197 (323)
T 3tki_A 156 RYNNRERLLNKMCGTLPYVAPELLKRR--EFHAEPVDVWSCGIV 197 (323)
T ss_dssp EETTEECCBCSCCSCGGGSCHHHHHCS--SBCHHHHHHHHHHHH
T ss_pred ccCCcccccCCCccCcCccCcHHhccC--CCCCCcccHHHHHHH
Confidence 43221 122345799999999998654 123678999999986
No 106
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.97 E-value=1.7e-31 Score=283.16 Aligned_cols=188 Identities=29% Similarity=0.353 Sum_probs=157.7
Q ss_pred HhcCCCccceeecccceEEEEEEeC-CCcEEEEEEeccccCChhhHHHHHHHHHHHHhc-CCCCcceEEeEEEeCCeEEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLL 656 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~l 656 (782)
+.++|++.+.||+|+||+||+|... +++.||||++...........++..|+..+.++ +||||+++++++.+++..++
T Consensus 55 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 3467999999999999999999664 799999999876554445555666676666665 89999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeecccee
Q 003982 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (782)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~ 736 (782)
||||+ +++|.+++.... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++..
T Consensus 135 v~e~~-~~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~ 206 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWG----ASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVE 206 (311)
T ss_dssp EEECC-CCBHHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTCEE
T ss_pred EEecc-CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceeeee
Confidence 99999 779999887642 358999999999999999999999 8999999999999999999999999999987
Q ss_pred cCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 737 APDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 737 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..... ......||+.|+|||++.+. ++.++||||+||+
T Consensus 207 ~~~~~--~~~~~~gt~~y~aPE~~~~~----~~~~~DiwslG~i 244 (311)
T 3p1a_A 207 LGTAG--AGEVQEGDPRYMAPELLQGS----YGTAADVFSLGLT 244 (311)
T ss_dssp CC--------CCCCCGGGCCGGGGGTC----CSTHHHHHHHHHH
T ss_pred cccCC--CCcccCCCccccCHhHhcCC----CCchhhHHHHHHH
Confidence 75433 22335699999999998875 3568999999986
No 107
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.97 E-value=1.3e-31 Score=285.85 Aligned_cols=190 Identities=26% Similarity=0.418 Sum_probs=159.2
Q ss_pred hcCCCccceeecccceEEEEEEeC----CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELP----DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL 655 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~ 655 (782)
.++|++.+.||+|+||.||+|... .+..||||+++... .....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 126 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAM 126 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccE
Confidence 467899999999999999999663 34569999997543 3455678999999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccce
Q 003982 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (782)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~ 735 (782)
+||||+++++|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++
T Consensus 127 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 127 IVTEYMENGSLDTFLRTH----DGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp EEEECCTTCBHHHHHHTT----TTCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred EEeeCCCCCcHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCccc
Confidence 999999999999998652 2458999999999999999999999 899999999999999999999999999998
Q ss_pred ecCCCCce--eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 736 NAPDGKYS--VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 736 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
........ ......+|+.|+|||++.+. .++.++||||+|++
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~i 243 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFR---TFSSASDVWSFGVV 243 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHC---EECHHHHHHHHHHH
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCC---CCCcHHHHHHHHHH
Confidence 77553221 22233567889999998754 45778999999986
No 108
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.97 E-value=2.2e-31 Score=290.06 Aligned_cols=187 Identities=21% Similarity=0.341 Sum_probs=161.9
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 658 (782)
.++|++.+.||+|+||.||+|.. .+++.||+|++.... ......+.+|++++++++||||+++++++.+....++||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 127 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL 127 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc--hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEE
Confidence 46899999999999999999955 578999999997643 334567899999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECC--CCcEEEEeecccee
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD--DMRAKVADFGLVKN 736 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~--~~~~kL~DfG~a~~ 736 (782)
||+++|+|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||+++. ++.+||+|||+++.
T Consensus 128 E~~~gg~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~ 200 (387)
T 1kob_A 128 EFLSGGELFDRIAAE----DYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATK 200 (387)
T ss_dssp ECCCCCBHHHHTTCT----TCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEE
T ss_pred EcCCCCcHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEeccccee
Confidence 999999999988542 2358999999999999999999999 89999999999999974 47899999999988
Q ss_pred cCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 737 APDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 737 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
....... ....||+.|+|||++.+. .++.++||||+||+
T Consensus 201 ~~~~~~~--~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~i 239 (387)
T 1kob_A 201 LNPDEIV--KVTTATAEFAAPEIVDRE---PVGFYTDMWAIGVL 239 (387)
T ss_dssp CCTTSCE--EEECSSGGGCCHHHHTTC---CBCHHHHHHHHHHH
T ss_pred cCCCcce--eeeccCCCccCchhccCC---CCCCcccEeeHhHH
Confidence 7654322 234799999999998765 45778999999986
No 109
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.97 E-value=5.5e-32 Score=303.17 Aligned_cols=190 Identities=26% Similarity=0.348 Sum_probs=148.1
Q ss_pred hcCCCccceeecccceEEEEEE-eCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeC-----Ce
Q 003982 580 TDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING-----SE 653 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~-----~~ 653 (782)
.++|++.+.||+|+||+||+|. ..+++.||||++..........+++.+|++++++++||||+++++++... ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 4689999999999999999995 45789999999976554555678899999999999999999999998543 56
Q ss_pred EEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeecc
Q 003982 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGL 733 (782)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~ 733 (782)
.|+||||+ +++|.+++.. ...+++.++..++.||+.||+|||+ .||+||||||+|||++.++.+||+|||+
T Consensus 132 ~~lv~e~~-~~~L~~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGl 202 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRT-----PVYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGL 202 (458)
T ss_dssp EEEEECCC-SEEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEecc-ccchhhhccc-----CCCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeeccccc
Confidence 89999998 5789988864 3458999999999999999999999 8999999999999999999999999999
Q ss_pred ceecCCCCc--------------------------eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 734 VKNAPDGKY--------------------------SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 734 a~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|+....... ......+||+.|+|||++... ..++.++||||+||+
T Consensus 203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~~~DiwSlG~i 273 (458)
T 3rp9_A 203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQ--ENYTEAIDVWSIGCI 273 (458)
T ss_dssp CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTC--CCCCTHHHHHHHHHH
T ss_pred chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCC--CCCCcHhHHHHHHHH
Confidence 987643211 112345789999999975432 135778999999986
No 110
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.97 E-value=1.1e-31 Score=303.10 Aligned_cols=190 Identities=29% Similarity=0.483 Sum_probs=164.3
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCC-hhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
.++|++.+.||+|+||.||+|.. .+|+.||||++.+.... ......+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 46799999999999999999965 57999999999764321 23456788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
|||+++|+|.+++.... ...+++..+..++.||+.||+|||+ .||+||||||+|||++.++.+||+|||+|+..
T Consensus 263 mEy~~gg~L~~~l~~~~---~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~ 336 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMG---QAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHV 336 (576)
T ss_dssp ECCCCSCBHHHHHHSSS---SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEcCCCCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceec
Confidence 99999999999986532 2358999999999999999999999 89999999999999999999999999999887
Q ss_pred CCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 738 PDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..... ....+||+.|+|||++.+. +++.++|+||+||+
T Consensus 337 ~~~~~--~~~~~GT~~Y~APEvl~~~---~~~~~~DiwSLGvi 374 (576)
T 2acx_A 337 PEGQT--IKGRVGTVGYMAPEVVKNE---RYTFSPDWWALGCL 374 (576)
T ss_dssp CTTCC--EECCCSCGGGCCHHHHTTC---EESSHHHHHHHHHH
T ss_pred ccCcc--ccccCCCccccCHHHHcCC---CCCccchHHHHHHH
Confidence 65432 2335899999999998774 45778999999986
No 111
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=3.7e-30 Score=275.43 Aligned_cols=194 Identities=22% Similarity=0.307 Sum_probs=157.0
Q ss_pred CccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCee
Q 003982 89 LTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTL 168 (782)
Q Consensus 89 l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L 168 (782)
..+|+.++++++.++..+..+. ++|++|+|++|+++++++..|.++++|++|+|++|++.. ..|..|.++++|++|
T Consensus 30 ~c~l~~l~~~~~~l~~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L 105 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISK--ISPGAFAPLVKLERL 105 (330)
T ss_dssp EEETTEEECTTSCCCSCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCC--BCTTTTTTCTTCCEE
T ss_pred cCCCeEEEecCCCccccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCe--eCHHHhcCCCCCCEE
Confidence 3468899999999997766554 789999999999999999999999999999999999998 568899999999999
Q ss_pred eccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeeccccc
Q 003982 169 YMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFT 248 (782)
Q Consensus 169 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 248 (782)
+|++|+++.. |..+. ++|++|++++|++++..+.. +.++++|++|++++|+++
T Consensus 106 ~Ls~n~l~~l-~~~~~--~~L~~L~l~~n~l~~~~~~~------------------------~~~l~~L~~L~l~~n~l~ 158 (330)
T 1xku_A 106 YLSKNQLKEL-PEKMP--KTLQELRVHENEITKVRKSV------------------------FNGLNQMIVVELGTNPLK 158 (330)
T ss_dssp ECCSSCCSBC-CSSCC--TTCCEEECCSSCCCBBCHHH------------------------HTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCcc-Chhhc--ccccEEECCCCcccccCHhH------------------------hcCCccccEEECCCCcCC
Confidence 9999999866 44433 79999999999998444333 446899999999999997
Q ss_pred C--CCC-CCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCCC---CCCccEEEccCCcCC
Q 003982 249 G--PIP-DLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLF---PSKVQKVSLDHNNFC 316 (782)
Q Consensus 249 ~--~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~---~~~l~~L~l~~N~~~ 316 (782)
. ..+ .+..+++|++|++++|+++ .+|..+. ++|++|++++|++++..|.. +.+|+.|++++|.++
T Consensus 159 ~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 229 (330)
T 1xku_A 159 SSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSIS 229 (330)
T ss_dssp GGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCC
T ss_pred ccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCc
Confidence 4 333 5889999999999999999 4565554 78999999999988665432 234445555555443
No 112
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=1.4e-31 Score=293.23 Aligned_cols=192 Identities=28% Similarity=0.426 Sum_probs=152.4
Q ss_pred HHHhcCCCccceeecccceEEEEEE-eCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcC-CCCcceEEeEEEeCC--
Q 003982 577 RQVTDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGS-- 652 (782)
Q Consensus 577 ~~~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nI~~~~~~~~~~~-- 652 (782)
..+.++|++.+.||+|+||.||+|. ..+++.||||++..........+++.+|+.+++++. ||||+++++++..++
T Consensus 5 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~ 84 (388)
T 3oz6_A 5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR 84 (388)
T ss_dssp HHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred CcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence 3467899999999999999999995 467899999999765545566778899999999997 999999999998654
Q ss_pred eEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeec
Q 003982 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG 732 (782)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG 732 (782)
..|+||||++ ++|.+++.. ..+++..+..++.|++.||+|||+ .||+||||||+|||++.++.+||+|||
T Consensus 85 ~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG 154 (388)
T 3oz6_A 85 DVYLVFDYME-TDLHAVIRA------NILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFG 154 (388)
T ss_dssp CEEEEEECCS-EEHHHHHHH------TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEecccC-cCHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCc
Confidence 6899999996 689988865 358999999999999999999999 899999999999999999999999999
Q ss_pred cceecCCCC--------------------ceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 733 LVKNAPDGK--------------------YSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 733 ~a~~~~~~~--------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+|+...... .......+||+.|+|||++.+. ..++.++||||+||+
T Consensus 155 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwSlG~i 220 (388)
T 3oz6_A 155 LSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGS--TKYTKGIDMWSLGCI 220 (388)
T ss_dssp TCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTC--CCCCTHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCC--CCCCChhhHHHHHHH
Confidence 998754311 1112345799999999988763 235678999999986
No 113
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.97 E-value=5.1e-32 Score=293.50 Aligned_cols=189 Identities=30% Similarity=0.403 Sum_probs=152.8
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCC-hhhHHHHHHHHHH-HHhcCCCCcceEEeEEEeCCeEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAV-LTKVRHRHLVALLGYCINGSERLL 656 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~-l~~l~h~nI~~~~~~~~~~~~~~l 656 (782)
.++|++.+.||+|+||.||+|+. .+++.||||++++.... ......+.+|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 36799999999999999999965 46889999999876532 2344556777776 567899999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeecccee
Q 003982 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (782)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~ 736 (782)
||||+++|+|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++.
T Consensus 117 v~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~ 188 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRE-----RCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKE 188 (373)
T ss_dssp EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGG
T ss_pred EEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCccccc
Confidence 99999999999998762 358899999999999999999999 8999999999999999999999999999986
Q ss_pred cCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 737 APDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 737 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..... ......+||+.|+|||++.+. +++.++|+||+||+
T Consensus 189 ~~~~~-~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~i 228 (373)
T 2r5t_A 189 NIEHN-STTSTFCGTPEYLAPEVLHKQ---PYDRTVDWWCLGAV 228 (373)
T ss_dssp GBCCC-CCCCSBSCCCCCCCHHHHTTC---CCCTHHHHHHHHHH
T ss_pred cccCC-CccccccCCccccCHHHhCCC---CCCchhhhHHHHHH
Confidence 43322 122346899999999998765 45778999999986
No 114
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.97 E-value=2.5e-31 Score=291.34 Aligned_cols=194 Identities=18% Similarity=0.263 Sum_probs=165.2
Q ss_pred hcCCCccceeecc--cceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEE
Q 003982 580 TDNFSEANILGRG--GFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLL 656 (782)
Q Consensus 580 ~~~y~~~~~lg~G--~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l 656 (782)
.++|++.+.||+| +||.||+|+. .+++.||||++..........+.+++|++++++++||||+++++++.+++..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3679999999999 9999999965 478999999998776556667889999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeecccee
Q 003982 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (782)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~ 736 (782)
||||+++|+|.+++.... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||.+..
T Consensus 104 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHF---MDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp EEECCTTCBHHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEccCCCCHHHHHhhhc---ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEccccccee
Confidence 999999999999997632 2458999999999999999999999 8999999999999999999999999999875
Q ss_pred cCCCCc------eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 737 APDGKY------SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 737 ~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
...... .......||+.|+|||++.+.. ..++.++||||+||+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~DiwslG~i 226 (389)
T 3gni_B 178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNL-QGYDAKSDIYSVGIT 226 (389)
T ss_dssp CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTS-SCBCTHHHHHHHHHH
T ss_pred eccccccccccccccccccccccccCHHHHhccC-CCCCcHhHHHHHHHH
Confidence 533211 1112246899999999987631 135678999999986
No 115
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.97 E-value=3.9e-31 Score=277.12 Aligned_cols=191 Identities=26% Similarity=0.362 Sum_probs=164.1
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhc-CCCCcceEEeEEEeCCeEEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLL 656 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~l 656 (782)
+.++|++.+.||+|+||.||+|.. .+++.||||++...........++.+|+..+.++ +||||+++++++.+++..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 457899999999999999999965 4789999999987655455677889999999999 89999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCC-------------
Q 003982 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD------------- 723 (782)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~------------- 723 (782)
||||+++++|.+++...... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~ 164 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRI-MSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDED 164 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC---------------
T ss_pred EEEecCCCcHHHHHHhhccc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCcccccccccc
Confidence 99999999999999764332 2458999999999999999999999 899999999999999844
Q ss_pred ------CcEEEEeeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 724 ------MRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 724 ------~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..+||+|||.+....... ...||+.|+|||++.+.. .++.++||||+|++
T Consensus 165 ~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~--~~~~~~Di~slG~i 220 (289)
T 1x8b_A 165 DWASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENY--THLPKADIFALALT 220 (289)
T ss_dssp -----CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCC--TTHHHHHHHHHHHH
T ss_pred cccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCC--CCCchhhHHHHHHH
Confidence 479999999998776533 235899999999987752 35679999999986
No 116
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.97 E-value=1.9e-31 Score=283.66 Aligned_cols=193 Identities=23% Similarity=0.344 Sum_probs=148.7
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 658 (782)
.++|++.+.||+|+||.||+|.. .+++.||+|+++... .....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS-EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS-TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc-ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 46799999999999999999965 468999999997654 2334567889999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 659 EYMPRGTLAQHLFEWHDH-GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
||++ ++|.+++...... ....+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++..
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9997 6999998764322 22458999999999999999999999 89999999999999999999999999999876
Q ss_pred CCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 738 PDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..... ......||+.|+|||++.+. ..++.++||||+||+
T Consensus 159 ~~~~~-~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~i 198 (317)
T 2pmi_A 159 GIPVN-TFSSEVVTLWYRAPDVLMGS--RTYSTSIDIWSCGCI 198 (317)
T ss_dssp TSCCC-CCCCCCSCCTTCCHHHHTTC--CCCCTHHHHHHHHHH
T ss_pred CCCcc-cCCCCcccccccCchHhhCC--CCCCcHHHHHHHHHH
Confidence 54321 22334789999999988653 134678999999986
No 117
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.97 E-value=1.5e-31 Score=301.64 Aligned_cols=193 Identities=27% Similarity=0.450 Sum_probs=165.9
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCC-hhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
.++|.+.+.||+|+||.||+|+. .+|+.||+|++.+.... ....+.+.+|++++++++||||+++++++.+....|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 36799999999999999999966 46899999999765322 23457789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
|||++||+|.+++...... ...+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++..
T Consensus 264 mE~~~gg~L~~~l~~~~~~-~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDED-NPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTT-SCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEeccCCCHHHHHHHhhcc-cccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeec
Confidence 9999999999998764322 3468999999999999999999999 89999999999999999999999999999887
Q ss_pred CCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 738 PDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..... .....+||+.|+|||++.+. +++.++|+||+||+
T Consensus 340 ~~~~~-~~~~~~GT~~Y~APE~l~~~---~~~~~~DiwSlGvi 378 (543)
T 3c4z_A 340 KAGQT-KTKGYAGTPGFMAPELLLGE---EYDFSVDYFALGVT 378 (543)
T ss_dssp CTTCC-CBCCCCSCTTTSCHHHHTTC---CBCTHHHHHHHHHH
T ss_pred cCCCc-ccccccCCccccChhhhcCC---CCChHHhcCcchHH
Confidence 65432 22335899999999998775 45778999999986
No 118
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.97 E-value=8.7e-32 Score=281.51 Aligned_cols=188 Identities=30% Similarity=0.467 Sum_probs=160.3
Q ss_pred hcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 659 (782)
.++|++.+.||+|+||.||+|+..++..||+|+++.... ..+++.+|++++++++||||+++++++.+.+..++|||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC---CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 467899999999999999999988888999999986542 34679999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecCC
Q 003982 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (782)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~~ 739 (782)
|+++++|.+++.... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++....
T Consensus 100 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 100 YMANGCLLNYLREMR----HRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp CCTTCBHHHHHHCGG----GCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred ccCCCcHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEccccccccccc
Confidence 999999999997632 348999999999999999999999 8999999999999999999999999999987654
Q ss_pred CCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 740 GKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..........+|+.|+|||++.+. .++.++|+||+|++
T Consensus 173 ~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~~ 210 (283)
T 3gen_A 173 DEYTSSVGSKFPVRWSPPEVLMYS---KFSSKSDIWAFGVL 210 (283)
T ss_dssp HHHHSTTSTTSCGGGCCHHHHHHC---CCSHHHHHHHHHHH
T ss_pred cccccccCCccCcccCCHHHhccC---CCCchhhHHHHHHH
Confidence 332222334578889999988754 35778999999986
No 119
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.97 E-value=3.3e-31 Score=279.66 Aligned_cols=187 Identities=26% Similarity=0.418 Sum_probs=156.2
Q ss_pred HhcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHh--cCCCCcceEEeEEEeC----C
Q 003982 579 VTDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTK--VRHRHLVALLGYCING----S 652 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~nI~~~~~~~~~~----~ 652 (782)
..++|++.+.||+|+||.||+|.. +++.||||++... ....+.+|.+++.. ++||||+++++++.+. .
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~ 79 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence 457899999999999999999987 7899999998653 23556667777766 7899999999987653 4
Q ss_pred eEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCCeEEcCCCCCCEEECCCC
Q 003982 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLH--------SLAQQSFIHRDLKPSNILIGDDM 724 (782)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH--------~~~~~~ivHrDikp~NIll~~~~ 724 (782)
..++||||+++|+|.++++. ..+++..+..++.|++.||+||| + .||+||||||+||+++.++
T Consensus 80 ~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nill~~~~ 150 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK---PAIAHRDLKSKNILVKKNG 150 (301)
T ss_dssp EEEEEECCCTTCBHHHHHTT------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB---CEEECSCCCGGGEEECTTS
T ss_pred eeEEehhhccCCCHHHHHhh------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCC---CCeecCCCChHhEEEcCCC
Confidence 57999999999999999943 35899999999999999999999 6 8999999999999999999
Q ss_pred cEEEEeeccceecCCCCcee---eecccccccccCccccccchhh---hHHHHHHHHHhccc
Q 003982 725 RAKVADFGLVKNAPDGKYSV---ETRLAGTFGYLAPEYAGKHWMI---LCQMTGLIWLHGSV 780 (782)
Q Consensus 725 ~~kL~DfG~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~---~~~~~~dvws~Gvv 780 (782)
.+||+|||+|+......... .....||+.|+|||++.+.... .++.++||||+|++
T Consensus 151 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~i 212 (301)
T 3q4u_A 151 QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLV 212 (301)
T ss_dssp CEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHH
Confidence 99999999998765443222 2234799999999998765322 45689999999986
No 120
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.97 E-value=1.5e-31 Score=296.75 Aligned_cols=190 Identities=27% Similarity=0.363 Sum_probs=158.1
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeC-----Ce
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING-----SE 653 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~-----~~ 653 (782)
.++|++.+.||+|+||.||+|.. .+++.||||++..........+++.+|++++++++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 46899999999999999999954 5688999999986554455678899999999999999999999999776 57
Q ss_pred EEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeecc
Q 003982 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGL 733 (782)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~ 733 (782)
.|+||||++ ++|.+++.. ...+++.++..++.|+++||+|||+ .||+||||||+|||++.++.+||+|||+
T Consensus 105 ~~lv~e~~~-~~L~~~~~~-----~~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFGl 175 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKT-----PIFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGL 175 (432)
T ss_dssp EEEEEECCS-EEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEecCC-cCHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCCC
Confidence 899999995 699998864 3458999999999999999999999 8999999999999999999999999999
Q ss_pred ceecCCCCce---------------------eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 734 VKNAPDGKYS---------------------VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 734 a~~~~~~~~~---------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|+........ .....+||+.|+|||++... ..++.++||||+||+
T Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~--~~~~~~~DiwSlG~i 241 (432)
T 3n9x_A 176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQ--ENYTKSIDIWSTGCI 241 (432)
T ss_dssp CEEC-------------------------------CCCCCTTCCHHHHTTC--SCCCTHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcC--CCCCcccccchHHHH
Confidence 9876543211 12446799999999986432 135778999999986
No 121
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=1.4e-30 Score=278.88 Aligned_cols=263 Identities=21% Similarity=0.296 Sum_probs=212.9
Q ss_pred ccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeee
Q 003982 90 TQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLY 169 (782)
Q Consensus 90 ~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~ 169 (782)
.+|+.++++++.++.++..+. ++|++|+|++|+++.+++..|.++++|++|+|++|++.. ..|..|.++++|++|+
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~ 108 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISK--IHEKAFSPLRKLQKLY 108 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE--ECGGGSTTCTTCCEEE
T ss_pred ccCCEEECCCCCccccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCc--cCHhHhhCcCCCCEEE
Confidence 478999999999997766553 789999999999999999999999999999999999988 5678999999999999
Q ss_pred ccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccccC
Q 003982 170 MDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTG 249 (782)
Q Consensus 170 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~ 249 (782)
|++|+++.+ |..+. ++|++|++++|+++ .+|.. .+.++++|++|++++|+++.
T Consensus 109 L~~n~l~~l-~~~~~--~~L~~L~l~~n~i~-~~~~~-----------------------~~~~l~~L~~L~l~~n~l~~ 161 (332)
T 2ft3_A 109 ISKNHLVEI-PPNLP--SSLVELRIHDNRIR-KVPKG-----------------------VFSGLRNMNCIEMGGNPLEN 161 (332)
T ss_dssp CCSSCCCSC-CSSCC--TTCCEEECCSSCCC-CCCSG-----------------------GGSSCSSCCEEECCSCCCBG
T ss_pred CCCCcCCcc-Ccccc--ccCCEEECCCCccC-ccCHh-----------------------HhCCCccCCEEECCCCcccc
Confidence 999999866 44433 89999999999998 44432 14469999999999999974
Q ss_pred --CCC-CCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCCC---CCCccEEEccCCcCCCCCCCCC
Q 003982 250 --PIP-DLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLF---PSKVQKVSLDHNNFCKNSSDAG 323 (782)
Q Consensus 250 --~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~---~~~l~~L~l~~N~~~~~~~~~~ 323 (782)
..+ .+..+ +|+.|++++|++++ +|..+. ++|++|++++|++++..+.. +.+|+.|++++|+++++.
T Consensus 162 ~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~---- 233 (332)
T 2ft3_A 162 SGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIE---- 233 (332)
T ss_dssp GGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCC----
T ss_pred CCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCC----
Confidence 444 47777 99999999999995 666554 78999999999999877653 346788888888776543
Q ss_pred CCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccc
Q 003982 324 KPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNL 403 (782)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 403 (782)
|..+..+++|+.|+|++|+++ .+|..+..+++|++|+|++|+|
T Consensus 234 ------------------------------------~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l 276 (332)
T 2ft3_A 234 ------------------------------------NGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNI 276 (332)
T ss_dssp ------------------------------------TTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCC
T ss_pred ------------------------------------hhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCC
Confidence 234556677888888888887 6777788888888888888888
Q ss_pred cccCCccCCCC------CCCCeEecCCCcCC
Q 003982 404 TGPIPDGLTKL------ASLQNLDVSNNNLS 428 (782)
Q Consensus 404 ~g~~p~~~~~l------~~L~~L~ls~N~l~ 428 (782)
++..+..|... ..|+.|++++|++.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 277 TKVGVNDFCPVGFGVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp CBCCTTSSSCSSCCSSSCCBSEEECCSSSSC
T ss_pred CccChhHccccccccccccccceEeecCccc
Confidence 86666666543 56778888888876
No 122
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.97 E-value=3.8e-31 Score=276.72 Aligned_cols=189 Identities=26% Similarity=0.446 Sum_probs=165.1
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
+.++|++.+.||+|+||.||+|.. .+++.||+|++..........+.+.+|++++++++||||+++++++.+++..++|
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 457899999999999999999954 5689999999987766666778899999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCc---EEEEeeccc
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR---AKVADFGLV 734 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~---~kL~DfG~a 734 (782)
|||+++++|.+.+... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++. +||+|||.+
T Consensus 84 ~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~ 155 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLA 155 (284)
T ss_dssp ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceee
Confidence 9999999999988763 358999999999999999999999 89999999999999986655 999999999
Q ss_pred eecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 735 KNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 735 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
........ .....||+.|+|||++.+. .++.++||||+|++
T Consensus 156 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~ 196 (284)
T 3kk8_A 156 IEVNDSEA--WHGFAGTPGYLSPEVLKKD---PYSKPVDIWACGVI 196 (284)
T ss_dssp EECCSSCB--CCCSCSCGGGCCHHHHTTC---CBCTHHHHHHHHHH
T ss_pred EEcccCcc--ccCCCCCcCCcCchhhcCC---CCCcccchHHHHHH
Confidence 87765332 2335789999999998765 35678999999986
No 123
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.97 E-value=1.7e-31 Score=297.76 Aligned_cols=188 Identities=30% Similarity=0.484 Sum_probs=163.3
Q ss_pred cCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCC-hhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEE
Q 003982 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 658 (782)
++|.+.+.||+|+||.||+|.. .+|+.||||++...... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 6799999999999999999965 47999999999764321 234568999999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecC
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~ 738 (782)
||+++|+|.+++.+ ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++...
T Consensus 96 E~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~ 167 (476)
T 2y94_A 96 EYVSGGELFDYICK-----NGRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167 (476)
T ss_dssp ECCSSEEHHHHTTS-----SSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred eCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence 99999999999854 3468999999999999999999998 899999999999999999999999999998876
Q ss_pred CCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 739 DGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.... ....+||+.|+|||++.+.. ..+.++||||+||+
T Consensus 168 ~~~~--~~~~~gt~~y~aPE~~~~~~--~~~~~~DiwSlGvi 205 (476)
T 2y94_A 168 DGEF--LRTSCGSPNYAAPEVISGRL--YAGPEVDIWSSGVI 205 (476)
T ss_dssp TTCC--BCCCCSCSTTCCHHHHTTCC--BCSHHHHHHHHHHH
T ss_pred cccc--ccccCCCcCeEChhhccCCC--CCCCcceehhhHHH
Confidence 5432 23357999999999988751 23578999999986
No 124
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.97 E-value=1.3e-30 Score=275.98 Aligned_cols=202 Identities=38% Similarity=0.651 Sum_probs=173.7
Q ss_pred ccccHHHHHHHhcCCCcc------ceeecccceEEEEEEeCCCcEEEEEEeccccC--ChhhHHHHHHHHHHHHhcCCCC
Q 003982 569 VAISIEVLRQVTDNFSEA------NILGRGGFGVVYGGELPDGTKIAVKRMESNTM--GNKGLSEFQAEIAVLTKVRHRH 640 (782)
Q Consensus 569 ~~~~~~~l~~~~~~y~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~n 640 (782)
..++.+++..++++|... +.||+|+||.||+|.. +++.||||++..... .....+.+.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 457888999999988877 9999999999999987 688999999875431 2335678999999999999999
Q ss_pred cceEEeEEEeCCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEE
Q 003982 641 LVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720 (782)
Q Consensus 641 I~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll 720 (782)
|+++++++.+.+..++||||+++++|.+++..... ..++++..+..++.|++.||+|||+ .||+||||||+||++
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nili 166 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG--TPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILL 166 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG--CCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEE
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEEE
Confidence 99999999999999999999999999999975433 3468999999999999999999999 899999999999999
Q ss_pred CCCCcEEEEeeccceecCCCCc-eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 721 GDDMRAKVADFGLVKNAPDGKY-SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 721 ~~~~~~kL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+.++.+||+|||++........ .......||+.|+|||++.+. ++.++||||+|++
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~----~~~~~Dv~slG~i 223 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGE----ITPKSDIYSFGVV 223 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTE----ECTHHHHHHHHHH
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCC----CCccchhHHHHHH
Confidence 9999999999999987654332 222345789999999998775 3568999999986
No 125
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.97 E-value=1.4e-31 Score=291.72 Aligned_cols=190 Identities=28% Similarity=0.444 Sum_probs=161.3
Q ss_pred hcCCCccceeecccceEEEEEEeC-CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 658 (782)
.++|.+.+.||+|+||.||+|... +++.||||+++... .....+++.+|++++++++||||+++++++.+++..++||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS-CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 357888999999999999999764 78999999987542 3344567899999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecC
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~ 738 (782)
||+++|+|.+++.... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++...
T Consensus 192 e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEG----ARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp ECCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred EcCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 9999999999997632 348999999999999999999999 899999999999999999999999999998765
Q ss_pred CCCceee-ecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 739 DGKYSVE-TRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 739 ~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
...+... ....+++.|+|||++.+. .++.++||||+||+
T Consensus 265 ~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslG~i 304 (377)
T 3cbl_A 265 DGVYAASGGLRQVPVKWTAPEALNYG---RYSSESDVWSFGIL 304 (377)
T ss_dssp TSEEECCSSCCEEEGGGSCHHHHHHC---EEEHHHHHHHHHHH
T ss_pred CCceeecCCCCCCCcCcCCHhHhccC---CCCchhhHHHHHHH
Confidence 4332221 112357789999988654 35778999999986
No 126
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.97 E-value=5.6e-32 Score=287.07 Aligned_cols=190 Identities=26% Similarity=0.388 Sum_probs=154.3
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCC-hhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCe----
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE---- 653 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~---- 653 (782)
.++|++.+.||+|+||.||+|.. .+++.||||++...... ......+.+|++++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46899999999999999999964 67899999999865432 3456789999999999999999999999876543
Q ss_pred EEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeecc
Q 003982 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGL 733 (782)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~ 733 (782)
.|+||||+++++|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 162 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGI 162 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCSC
T ss_pred cEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeeccC
Confidence 49999999999999999762 358999999999999999999999 8999999999999999999999999999
Q ss_pred ceecCCCCc--eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 734 VKNAPDGKY--SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 734 a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
++....... .......||+.|+|||++.+. .++.++||||+|++
T Consensus 163 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~~ 208 (311)
T 3ork_A 163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGD---SVDARSDVYSLGCV 208 (311)
T ss_dssp C------------------CCTTCCHHHHHTC---CCCHHHHHHHHHHH
T ss_pred cccccccccccccccccCcCcccCCHHHhcCC---CCCchHhHHHHHHH
Confidence 987654322 122335689999999998765 45778999999986
No 127
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.97 E-value=2.3e-31 Score=285.50 Aligned_cols=184 Identities=26% Similarity=0.405 Sum_probs=157.1
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhc-CCCCcceEEeEEEeCCeEEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLL 656 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~l 656 (782)
+.++|++.+.||+|+||.||+|.. .+++.||||++++... ...+|++++.++ +||||+++++++.+++..|+
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 567899999999999999999955 5789999999976542 245788888887 79999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCC----CcEEEEeec
Q 003982 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD----MRAKVADFG 732 (782)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~----~~~kL~DfG 732 (782)
||||+++|+|.+++.. ...+++.++..++.|++.||+|||+ .||+||||||+||++.++ +.+||+|||
T Consensus 94 v~E~~~gg~L~~~i~~-----~~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg 165 (342)
T 2qr7_A 94 VTELMKGGELLDKILR-----QKFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFG 165 (342)
T ss_dssp EECCCCSCBHHHHHHT-----CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCT
T ss_pred EEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECC
Confidence 9999999999999865 2458999999999999999999999 899999999999998543 359999999
Q ss_pred cceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 733 LVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 733 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+++....... .....+||+.|+|||++.+. +++.++|+||+||+
T Consensus 166 ~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~i 209 (342)
T 2qr7_A 166 FAKQLRAENG-LLMTPCYTANFVAPEVLERQ---GYDAACDIWSLGVL 209 (342)
T ss_dssp TCEECBCTTC-CBCCSSCCSSCCCHHHHHHH---HHHHHHHHHHHHHH
T ss_pred CcccCcCCCC-ceeccCCCccccCHHHhcCC---CCCCccCeeeHhHH
Confidence 9987654332 22345789999999998764 57889999999986
No 128
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.97 E-value=3.2e-31 Score=281.25 Aligned_cols=190 Identities=24% Similarity=0.306 Sum_probs=157.4
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 658 (782)
.++|++.+.||+|+||.||+|.. .+++.||||++..........+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 46899999999999999999965 46899999999776544555678899999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecC
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~ 738 (782)
||++++++.+++.. ...+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++....
T Consensus 82 e~~~~~~l~~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 153 (311)
T 4agu_A 82 EYCDHTVLHELDRY-----QRGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLT 153 (311)
T ss_dssp ECCSEEHHHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EeCCCchHHHHHhh-----hcCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhcc
Confidence 99999999887754 2458999999999999999999999 899999999999999999999999999998775
Q ss_pred CCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 739 DGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.... ......||+.|+|||++.+. ..++.++|+||+|++
T Consensus 154 ~~~~-~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~i 192 (311)
T 4agu_A 154 GPSD-YYDDEVATRWYRSPELLVGD--TQYGPPVDVWAIGCV 192 (311)
T ss_dssp -------------GGGCCHHHHHTC--SCCCTHHHHHHHHHH
T ss_pred Cccc-ccCCCcCCccccChHHHhcC--CCCCcchhhHHHHHH
Confidence 4332 22345789999999988653 234678999999986
No 129
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.97 E-value=8.1e-31 Score=300.73 Aligned_cols=278 Identities=25% Similarity=0.348 Sum_probs=232.1
Q ss_pred CCCCccccceEeCC-------CCCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCCCCCCCCCCCEEeCCCC
Q 003982 51 STGYCEWTGINCDN-------SNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNN 123 (782)
Q Consensus 51 ~~~~c~w~gv~c~~-------~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n 123 (782)
..++|.|+|..|.. ..+++.|++++++|+ .+|..+. ++|++|+|++|.|+.+++ .+++|++|+|++|
T Consensus 18 ~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~lp~---~l~~L~~L~Ls~N 91 (622)
T 3g06_A 18 AAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPA---LPPELRTLEVSGN 91 (622)
T ss_dssp TCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSCCCC---CCTTCCEEEECSC
T ss_pred cCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCCCCC---cCCCCCEEEcCCC
Confidence 45789997754321 235899999999999 8888776 899999999999997665 5789999999999
Q ss_pred cccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCC
Q 003982 124 NFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSL 203 (782)
Q Consensus 124 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 203 (782)
+|+.+|. .+++|++|+|++|++.. +|. .+++|+.|++++|+|+++ |.. +++|++|+|++|+++ .+
T Consensus 92 ~l~~lp~----~l~~L~~L~Ls~N~l~~---l~~---~l~~L~~L~L~~N~l~~l-p~~---l~~L~~L~Ls~N~l~-~l 156 (622)
T 3g06_A 92 QLTSLPV----LPPGLLELSIFSNPLTH---LPA---LPSGLCKLWIFGNQLTSL-PVL---PPGLQELSVSDNQLA-SL 156 (622)
T ss_dssp CCSCCCC----CCTTCCEEEECSCCCCC---CCC---CCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCS-CC
T ss_pred cCCcCCC----CCCCCCEEECcCCcCCC---CCC---CCCCcCEEECCCCCCCcC-CCC---CCCCCEEECcCCcCC-Cc
Confidence 9999887 68999999999999988 455 568899999999999886 443 489999999999998 45
Q ss_pred CccccccccchhhcccccCCCccccccccCCCCCcEEEeecccccCCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCC
Q 003982 204 PASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPA 283 (782)
Q Consensus 204 p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 283 (782)
|.. +++|+.|++++|++++.+ ..+++|+.|+|++|+|++ +|.. +++
T Consensus 157 ~~~---------------------------~~~L~~L~L~~N~l~~l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~ 202 (622)
T 3g06_A 157 PAL---------------------------PSELCKLWAYNNQLTSLP---MLPSGLQELSVSDNQLAS-LPTL---PSE 202 (622)
T ss_dssp CCC---------------------------CTTCCEEECCSSCCSCCC---CCCTTCCEEECCSSCCSC-CCCC---CTT
T ss_pred CCc---------------------------cCCCCEEECCCCCCCCCc---ccCCCCcEEECCCCCCCC-CCCc---cch
Confidence 542 468999999999999865 557899999999999995 4443 478
Q ss_pred CCEEEccCCcccCCCCCCCCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCccc
Q 003982 284 LLNISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVT 363 (782)
Q Consensus 284 L~~L~l~~N~l~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 363 (782)
|+.|++++|.++. +|..+++|+.|+|++|++++++
T Consensus 203 L~~L~L~~N~l~~-l~~~~~~L~~L~Ls~N~L~~lp-------------------------------------------- 237 (622)
T 3g06_A 203 LYKLWAYNNRLTS-LPALPSGLKELIVSGNRLTSLP-------------------------------------------- 237 (622)
T ss_dssp CCEEECCSSCCSS-CCCCCTTCCEEECCSSCCSCCC--------------------------------------------
T ss_pred hhEEECcCCcccc-cCCCCCCCCEEEccCCccCcCC--------------------------------------------
Confidence 9999999999985 5556788999999999886644
Q ss_pred ccCCceeEEEccCcccccccCccccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcCCCCCCC
Q 003982 364 CSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVPD 433 (782)
Q Consensus 364 ~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~ 433 (782)
..+++|+.|+|++|+|++ +|. .+++|++|+|++|+|+ .+|..|..+++|+.|+|++|++++.+|.
T Consensus 238 ~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 238 VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHH
T ss_pred CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHH
Confidence 123579999999999984 665 6789999999999999 8899999999999999999999988774
No 130
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.97 E-value=4.3e-31 Score=281.79 Aligned_cols=183 Identities=23% Similarity=0.340 Sum_probs=140.3
Q ss_pred cCCCcc---ceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcC-CCCcceEEeEEEeCCeEE
Q 003982 581 DNFSEA---NILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGSERL 655 (782)
Q Consensus 581 ~~y~~~---~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nI~~~~~~~~~~~~~~ 655 (782)
++|++. +.||+|+||.||+|.. .+++.||||++... ....+.+|+++++.+. ||||+++++++.++...+
T Consensus 8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~ 82 (325)
T 3kn6_A 8 QHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTF 82 (325)
T ss_dssp HHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred hccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEE
Confidence 345543 7899999999999955 56899999999653 3467889999999997 999999999999999999
Q ss_pred EEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCC---cEEEEeec
Q 003982 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM---RAKVADFG 732 (782)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~---~~kL~DfG 732 (782)
+||||+++|+|.+++.. ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++ .+||+|||
T Consensus 83 lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 154 (325)
T 3kn6_A 83 LVMELLNGGELFERIKK-----KKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFG 154 (325)
T ss_dssp EEECCCCSCBHHHHHHH-----CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCT
T ss_pred EEEEccCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccc
Confidence 99999999999999976 3468999999999999999999999 8999999999999997665 89999999
Q ss_pred cceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 733 LVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 733 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+++....... .....+||+.|+|||++.+. +++.++||||+|++
T Consensus 155 ~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~---~~~~~~DiwslG~i 198 (325)
T 3kn6_A 155 FARLKPPDNQ-PLKTPCFTLHYAAPELLNQN---GYDESCDLWSLGVI 198 (325)
T ss_dssp TCEECCC-----------------------C---CCCHHHHHHHHHHH
T ss_pred cceecCCCCC-cccccCCCcCccCHHHhcCC---CCCCccchHHHHHH
Confidence 9987654332 22345689999999998765 45778999999986
No 131
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.97 E-value=1.5e-31 Score=286.47 Aligned_cols=191 Identities=27% Similarity=0.360 Sum_probs=163.3
Q ss_pred HHhcCCCccceeecccceEEEEEE-eCCCcEEEEEEeccccCCh------hhHHHHHHHHHHHHhcCCCCcceEEeEEEe
Q 003982 578 QVTDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGN------KGLSEFQAEIAVLTKVRHRHLVALLGYCIN 650 (782)
Q Consensus 578 ~~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~------~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~ 650 (782)
.+.++|++.+.||+|+||.||+|. ..+++.||||++....... ...+.+.+|++++++++||||+++++++.+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~ 100 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN 100 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence 466789999999999999999995 4678999999998654322 134567889999999999999999999999
Q ss_pred CCeEEEEEEccCCC-CHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEE
Q 003982 651 GSERLLVYEYMPRG-TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVA 729 (782)
Q Consensus 651 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~ 729 (782)
.+..++||||+.+| +|.+++.. ...+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+||+
T Consensus 101 ~~~~~lv~e~~~~g~~l~~~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~ 172 (335)
T 3dls_A 101 QGFFQLVMEKHGSGLDLFAFIDR-----HPRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLI 172 (335)
T ss_dssp SSEEEEEEECCTTSCBHHHHHHT-----CCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEEC
T ss_pred CCEEEEEEEeCCCCccHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEe
Confidence 99999999999776 99998865 3458999999999999999999999 899999999999999999999999
Q ss_pred eeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 730 DFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 730 DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|||+++....... .....||+.|+|||++.+.- ..+.++||||+|++
T Consensus 173 Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~--~~~~~~DiwslG~i 219 (335)
T 3dls_A 173 DFGSAAYLERGKL--FYTFCGTIEYCAPEVLMGNP--YRGPELEMWSLGVT 219 (335)
T ss_dssp CCTTCEECCTTCC--BCEECSCGGGCCHHHHTTCC--BCSHHHHHHHHHHH
T ss_pred ecccceECCCCCc--eeccCCCccccChhhhcCCC--CCCCcccchhHHHH
Confidence 9999988765432 22357999999999987641 12678999999986
No 132
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.97 E-value=2.2e-31 Score=288.16 Aligned_cols=186 Identities=24% Similarity=0.307 Sum_probs=150.7
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 658 (782)
.++|++.+.||+|+||+||+|+. .+++.||||++.... ...+.+++|+.++++++||||+++++++.+++..++||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 95 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA---AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST---TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc---cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence 46799999999999999999965 478999999997643 23367889999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCc--EEEEeecccee
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR--AKVADFGLVKN 736 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~--~kL~DfG~a~~ 736 (782)
||+++|+|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++. +||+|||+|+.
T Consensus 96 e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~ 167 (361)
T 3uc3_A 96 EYASGGELYERICNA-----GRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKS 167 (361)
T ss_dssp ECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred EeCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence 999999999998652 358999999999999999999998 89999999999999987765 99999999975
Q ss_pred cCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 737 APDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 737 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..... ......||+.|+|||++.+.- ....++||||+|++
T Consensus 168 ~~~~~--~~~~~~gt~~y~aPE~~~~~~--~~~~~~DiwslG~i 207 (361)
T 3uc3_A 168 SVLHS--QPKSTVGTPAYIAPEVLLRQE--YDGKIADVWSCGVT 207 (361)
T ss_dssp ---------------CTTSCHHHHHCSS--CCHHHHHHHHHHHH
T ss_pred ccccC--CCCCCcCCCCcCChhhhcCCC--CCCCeeeeehhHHH
Confidence 43322 223357999999999876541 12455899999986
No 133
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.97 E-value=2e-31 Score=289.70 Aligned_cols=190 Identities=27% Similarity=0.433 Sum_probs=151.1
Q ss_pred hcCCCccceeecccceEEEEEEeC----CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELP----DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL 655 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~ 655 (782)
.++|++.+.||+|+||.||+|... ++..||||+++... .....+++.+|++++++++||||+++++++.+.+..+
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 122 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence 357999999999999999999654 57789999997643 3455678999999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccce
Q 003982 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (782)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~ 735 (782)
+||||+++|+|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++
T Consensus 123 lv~e~~~~~sL~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 195 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRKH----DAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGR 195 (373)
T ss_dssp EEEECCTTCBHHHHHHTT----TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred EEEeCCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCcccc
Confidence 999999999999999652 2358999999999999999999999 899999999999999999999999999998
Q ss_pred ecCCCCcee--eecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 736 NAPDGKYSV--ETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 736 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
......... .....+++.|+|||++.+. .++.++||||+|++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~SlG~i 239 (373)
T 2qol_A 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYR---KFTSASDVWSYGIV 239 (373)
T ss_dssp ------------------CTTSCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred ccccCCccceeccCCCcCCCccChhhhccC---CcCchhcHHHHHHH
Confidence 765432111 1122457789999988754 45778999999986
No 134
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.97 E-value=2.2e-31 Score=288.77 Aligned_cols=194 Identities=23% Similarity=0.317 Sum_probs=165.1
Q ss_pred cccHHHHHHHhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcC-----CCCcce
Q 003982 570 AISIEVLRQVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-----HRHLVA 643 (782)
Q Consensus 570 ~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----h~nI~~ 643 (782)
.++.+....+.++|++.+.||+|+||.||+|.. .+++.||||+++.. ....+.+..|+++++.++ ||||++
T Consensus 24 ~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 24 HFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI---KKYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp SCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---HHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred eeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc---hhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 344444555678999999999999999999965 57899999999743 345567888999999986 999999
Q ss_pred EEeEEEeCCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECC-
Q 003982 644 LLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD- 722 (782)
Q Consensus 644 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~- 722 (782)
+++++...+..++||||+ +++|.+++.... ...+++.++..++.|++.||+|||+ .||+||||||+|||++.
T Consensus 101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~ 173 (360)
T 3llt_A 101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRNN---YNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDP 173 (360)
T ss_dssp EEEEEEETTEEEEEECCC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCT
T ss_pred ccceeeECCeeEEEEcCC-CCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccc
Confidence 999999999999999999 999999997632 2358999999999999999999999 89999999999999975
Q ss_pred ------------------------CCcEEEEeeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhc
Q 003982 723 ------------------------DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHG 778 (782)
Q Consensus 723 ------------------------~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~G 778 (782)
++.+||+|||+|+...... ....||+.|+|||++.+. .++.++||||+|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG 246 (360)
T 3llt_A 174 YFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILNL---GWDVSSDMWSFG 246 (360)
T ss_dssp TCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTTC---CCCTTHHHHHHH
T ss_pred cccccccchhcccccccccccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcCC---CCCCccchHHHH
Confidence 7899999999998755432 345789999999998765 457789999999
Q ss_pred cc
Q 003982 779 SV 780 (782)
Q Consensus 779 vv 780 (782)
|+
T Consensus 247 ~i 248 (360)
T 3llt_A 247 CV 248 (360)
T ss_dssp HH
T ss_pred HH
Confidence 86
No 135
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=1.1e-31 Score=290.23 Aligned_cols=192 Identities=24% Similarity=0.324 Sum_probs=161.9
Q ss_pred hcCCCccceeecccceEEEEEEe----CCCcEEEEEEeccccC--ChhhHHHHHHHHHHHHhc-CCCCcceEEeEEEeCC
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL----PDGTKIAVKRMESNTM--GNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGS 652 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~ 652 (782)
.++|++.+.||+|+||.||+|+. .+++.||||+++.... .....+.+.+|+++++++ +||||+++++++.+..
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36799999999999999999976 4789999999975432 122345678899999999 5999999999999999
Q ss_pred eEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeec
Q 003982 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG 732 (782)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG 732 (782)
..++||||+++++|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG 204 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFG 204 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSS
T ss_pred eEEEEeecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCC
Confidence 999999999999999999763 358999999999999999999999 899999999999999999999999999
Q ss_pred cceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 733 LVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 733 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+++.............+||+.|+|||++.+.. ..++.++||||+||+
T Consensus 205 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~DvwslG~i 251 (355)
T 1vzo_A 205 LSKEFVADETERAYDFCGTIEYMAPDIVRGGD-SGHDKAVDWWSLGVL 251 (355)
T ss_dssp EEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC----CTHHHHHHHHHH
T ss_pred CCeecccCCCCcccCcccCcCccChhhhcCCC-CCCCchhhHHHHHHH
Confidence 99876543333334467999999999987531 245678999999986
No 136
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.97 E-value=1.5e-31 Score=281.53 Aligned_cols=189 Identities=29% Similarity=0.524 Sum_probs=156.4
Q ss_pred hcCCCccceeecccceEEEEEEe-----CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeC--C
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-----PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING--S 652 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~--~ 652 (782)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++... .
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 46789999999999999999973 468899999997543 45567899999999999999999999998653 5
Q ss_pred eEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeec
Q 003982 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG 732 (782)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG 732 (782)
..++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg 159 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFG 159 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHCG----GGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred ceEEEEEeCCCCCHHHHHHhcc----cccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCc
Confidence 5899999999999999997632 248999999999999999999999 899999999999999999999999999
Q ss_pred cceecCCCCc--eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 733 LVKNAPDGKY--SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 733 ~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+++....... .......++..|+|||++.+. .++.++||||+|++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~ 206 (295)
T 3ugc_A 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTES---KFSVASDVWSFGVV 206 (295)
T ss_dssp SCC-------------CTTCGGGGCCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred ccccccCCcceeeeccCCCCccceeCcHHhcCC---CCChHHHHHHHHHH
Confidence 9987654321 122334578889999988764 45789999999986
No 137
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.97 E-value=5.4e-31 Score=280.57 Aligned_cols=193 Identities=25% Similarity=0.371 Sum_probs=160.7
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCC--eEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS--ERLL 656 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~--~~~l 656 (782)
.++|++.+.||+|+||+||+|.. .+++.||||++..... ....+.+.+|++++++++||||+++++++.... ..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence 46799999999999999999965 4589999999975432 234677889999999999999999999998765 7799
Q ss_pred EEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEE----CCCCcEEEEeec
Q 003982 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI----GDDMRAKVADFG 732 (782)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll----~~~~~~kL~DfG 732 (782)
||||+++++|.+++..... ...+++.++..++.|++.||+|||+ .||+||||||+||++ +.++.+||+|||
T Consensus 87 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg 161 (319)
T 4euu_A 87 IMEFCPCGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (319)
T ss_dssp EEECCTTCBHHHHHHSGGG--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred EEeCCCCCCHHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCC
Confidence 9999999999999976433 2348999999999999999999999 899999999999999 788889999999
Q ss_pred cceecCCCCceeeecccccccccCccccccc-----hhhhHHHHHHHHHhccc
Q 003982 733 LVKNAPDGKYSVETRLAGTFGYLAPEYAGKH-----WMILCQMTGLIWLHGSV 780 (782)
Q Consensus 733 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~~~~dvws~Gvv 780 (782)
+++....... .....||+.|+|||++... ....++.++||||+|++
T Consensus 162 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~i 212 (319)
T 4euu_A 162 AARELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVT 212 (319)
T ss_dssp TCEECCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHH
T ss_pred CceecCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHH
Confidence 9988765432 2335689999999987521 01234668899999986
No 138
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.97 E-value=4.9e-31 Score=288.07 Aligned_cols=194 Identities=31% Similarity=0.496 Sum_probs=164.1
Q ss_pred hcCCCccceeecccceEEEEEEe--------CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhc-CCCCcceEEeEEEe
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL--------PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCIN 650 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~ 650 (782)
.++|.+.+.||+|+||.||+|.. ..+..||||+++... .....+++.+|+++++++ +||||+++++++.+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc-CHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 46889999999999999999964 233579999997653 345667899999999999 89999999999999
Q ss_pred CCeEEEEEEccCCCCHHHHHHhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEE
Q 003982 651 GSERLLVYEYMPRGTLAQHLFEWHDH-----------GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719 (782)
Q Consensus 651 ~~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIl 719 (782)
++..++||||+++|+|.+++...... ....+++.+++.++.|++.||+|||+ .||+||||||+||+
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcceEE
Confidence 99999999999999999999875421 12358999999999999999999999 89999999999999
Q ss_pred ECCCCcEEEEeeccceecCCCCc-eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 720 IGDDMRAKVADFGLVKNAPDGKY-SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 720 l~~~~~~kL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
++.++.+||+|||+|+....... .......+|+.|+|||++.+. .++.++||||+|++
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~DiwslG~i 282 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR---IYTHQSDVWSFGVL 282 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSC---CCCHHHHHHHHHHH
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCC---CCCchhHHHHHHHH
Confidence 99999999999999987654332 222334678999999988764 45788999999986
No 139
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.97 E-value=5.2e-31 Score=278.85 Aligned_cols=191 Identities=27% Similarity=0.429 Sum_probs=156.1
Q ss_pred hcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 659 (782)
.++|.+.+.||+|+||.||+|... ..+|+|+++.........+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 367899999999999999999763 46999998876555566788999999999999999999999864 556899999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecCC
Q 003982 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (782)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~~ 739 (782)
|+++++|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+|+....
T Consensus 112 ~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~ 184 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQ----ETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp CCSSCBHHHHHHTS----CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred cCCCCcHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence 99999999998642 3468999999999999999999999 8999999999999999999999999999976543
Q ss_pred CC-ceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 740 GK-YSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 740 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.. ........||+.|+|||++...-...++.++||||+|++
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~i 226 (307)
T 3lb7_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIV 226 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHH
T ss_pred ccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHH
Confidence 21 122234579999999998752212245778999999986
No 140
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.97 E-value=2.6e-31 Score=286.36 Aligned_cols=185 Identities=28% Similarity=0.411 Sum_probs=145.3
Q ss_pred HhcCCCccceeecccceEEEEEEeC-CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
..++|++.+.||+|+||.||+|... +++.||||+++... ..+.+.+|++++++++||||+++++++.+++..++|
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 126 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLV 126 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEE
Confidence 4578999999999999999999664 67899999997543 346788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECC---CCcEEEEeeccc
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD---DMRAKVADFGLV 734 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~---~~~~kL~DfG~a 734 (782)
|||+++++|.+++.. ...+++.++..++.|++.||+|||+ .||+||||||+||+++. ++.+||+|||++
T Consensus 127 ~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a 198 (349)
T 2w4o_A 127 LELVTGGELFDRIVE-----KGYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLS 198 (349)
T ss_dssp ECCCCSCBHHHHHTT-----CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC--
T ss_pred EEeCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCccc
Confidence 999999999999864 3458999999999999999999999 89999999999999975 889999999999
Q ss_pred eecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 735 KNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 735 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+...... ......||+.|+|||++.+. .++.++||||+||+
T Consensus 199 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~i 239 (349)
T 2w4o_A 199 KIVEHQV--LMKTVCGTPGYCAPEILRGC---AYGPEVDMWSVGII 239 (349)
T ss_dssp ----------------CGGGSCHHHHTTC---CCCTHHHHHHHHHH
T ss_pred cccCccc--ccccccCCCCccCHHHhcCC---CCCcccchHHHHHH
Confidence 8765432 12335789999999998764 35678999999986
No 141
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.97 E-value=3.5e-31 Score=284.96 Aligned_cols=191 Identities=24% Similarity=0.328 Sum_probs=158.1
Q ss_pred hcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCC--CCcceEEeEEEeCCeEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRH--RHLVALLGYCINGSERLLV 657 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~nI~~~~~~~~~~~~~~lv 657 (782)
.++|++.+.||+|+||.||+|...+++.||||++..........+.+.+|++++++++| |||+++++++.++...++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 45799999999999999999988889999999998766556667889999999999986 9999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
||+ .+++|.+++.. ...+++.++..++.|++.||+|||+ .||+||||||+|||++ ++.+||+|||+++..
T Consensus 88 ~e~-~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQM 157 (343)
T ss_dssp ECC-CSEEHHHHHHH-----SCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred EeC-CCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence 995 58899999976 2458999999999999999999999 8999999999999996 678999999999876
Q ss_pred CCCCce-eeecccccccccCccccccch--------hhhHHHHHHHHHhccc
Q 003982 738 PDGKYS-VETRLAGTFGYLAPEYAGKHW--------MILCQMTGLIWLHGSV 780 (782)
Q Consensus 738 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~--------~~~~~~~~dvws~Gvv 780 (782)
...... .....+||+.|+|||++.+.. ...++.++||||+||+
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~i 209 (343)
T 3dbq_A 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCI 209 (343)
T ss_dssp ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHH
T ss_pred CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHH
Confidence 543322 223457999999999875410 1245778999999986
No 142
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.97 E-value=7.6e-31 Score=273.44 Aligned_cols=186 Identities=25% Similarity=0.366 Sum_probs=162.1
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
+.++|++.+.||+|+||.||+|.. .++..||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF--VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG--CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc--cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 457899999999999999999955 457799999997654 23467899999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEE---CCCCcEEEEeeccc
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI---GDDMRAKVADFGLV 734 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll---~~~~~~kL~DfG~a 734 (782)
|||+++++|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||++ +.++.+||+|||++
T Consensus 85 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~ 156 (277)
T 3f3z_A 85 MELCTGGELFERVVHK-----RVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA 156 (277)
T ss_dssp EECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EeccCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccc
Confidence 9999999999988762 358999999999999999999999 899999999999999 78889999999999
Q ss_pred eecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 735 KNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 735 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
........ .....||+.|+|||++.+. ++.++||||+|++
T Consensus 157 ~~~~~~~~--~~~~~~t~~y~aPE~~~~~----~~~~~Di~slG~~ 196 (277)
T 3f3z_A 157 ARFKPGKM--MRTKVGTPYYVSPQVLEGL----YGPECDEWSAGVM 196 (277)
T ss_dssp EECCTTSC--BCCCCSCTTTCCHHHHTTC----BCTTHHHHHHHHH
T ss_pred eeccCccc--hhccCCCCCccChHHhccc----CCchhhehhHHHH
Confidence 87765432 2334689999999998775 3567899999986
No 143
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.97 E-value=3.3e-31 Score=283.65 Aligned_cols=186 Identities=22% Similarity=0.272 Sum_probs=159.8
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhc-CCCCcceEEeEEEeCCeEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~lv 657 (782)
.++|++.+.||+|+||.||+|.. .+++.||||++..... .+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 83 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMV 83 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEE
Confidence 46799999999999999999964 6789999999875432 24688999999999 899999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCc-----EEEEeec
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR-----AKVADFG 732 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~-----~kL~DfG 732 (782)
|||+ +++|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++. +||+|||
T Consensus 84 ~e~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg 155 (330)
T 2izr_A 84 LELL-GPSLEDLFDLC----DRTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFA 155 (330)
T ss_dssp EECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCT
T ss_pred EEeC-CCCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcc
Confidence 9999 99999999763 2458999999999999999999999 89999999999999998887 9999999
Q ss_pred cceecCCCCce------eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 733 LVKNAPDGKYS------VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 733 ~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+|+........ ......||+.|+|||++.+. .++.++||||+|++
T Consensus 156 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~i 206 (330)
T 2izr_A 156 LAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGK---EQSRRDDLEALGHM 206 (330)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTC---CCCHHHHHHHHHHH
T ss_pred cceeeecCCCCccccccccCCcCCCccccChHHHcCC---CCCchhHHHHHHHH
Confidence 99876543221 12346799999999998875 45789999999986
No 144
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.97 E-value=2.7e-31 Score=299.55 Aligned_cols=189 Identities=29% Similarity=0.491 Sum_probs=164.0
Q ss_pred hcCCCccceeecccceEEEEEEeC-CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 658 (782)
.++|++.+.||+|+||.||+|.+. ++..||||+++... ...++|.+|++++++++||||+++++++.+.+..++||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 295 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc---cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence 356888999999999999999765 48899999997643 34678999999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecC
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~ 738 (782)
||+++|+|.+++.... ...+++..+..++.|++.||+|||+ +||+||||||+|||++.++.+||+|||+++...
T Consensus 296 E~~~~g~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 296 EFMTYGNLLDYLRECN---RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp ECCTTCBHHHHHHHSC---TTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred EccCCCCHHHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 9999999999997632 2458999999999999999999999 899999999999999999999999999998876
Q ss_pred CCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 739 DGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
...........+++.|+|||++.+. .++.++|||||||+
T Consensus 370 ~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~sDvwSlG~~ 408 (495)
T 1opk_A 370 GDTYTAHAGAKFPIKWTAPESLAYN---KFSIKSDVWAFGVL 408 (495)
T ss_dssp TCCEECCTTCCCCGGGCCHHHHHHC---EECHHHHHHHHHHH
T ss_pred CCceeecCCCcCCcceeCHhHHhcC---CCCcHHhHHhHHHH
Confidence 5444333344567899999988754 45788999999986
No 145
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.97 E-value=6.6e-31 Score=285.46 Aligned_cols=181 Identities=29% Similarity=0.434 Sum_probs=151.9
Q ss_pred cceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEEEccCCC
Q 003982 586 ANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPRG 664 (782)
Q Consensus 586 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~~g 664 (782)
.+.||+|+||.||+|.. .+|+.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++||||++++
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRG--MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc--cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 67899999999999954 578999999997654 345678999999999999999999999999999999999999999
Q ss_pred CHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEE--CCCCcEEEEeeccceecCCCCc
Q 003982 665 TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI--GDDMRAKVADFGLVKNAPDGKY 742 (782)
Q Consensus 665 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll--~~~~~~kL~DfG~a~~~~~~~~ 742 (782)
+|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||++ +.++.+||+|||+++.......
T Consensus 172 ~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~ 244 (373)
T 2x4f_A 172 ELFDRIIDE----SYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK 244 (373)
T ss_dssp EEHHHHHHT----GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB
T ss_pred cHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc
Confidence 999988652 2358999999999999999999999 899999999999999 6678999999999988765332
Q ss_pred eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 743 SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 743 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.....||+.|+|||++.+. .++.++||||+||+
T Consensus 245 --~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~i 277 (373)
T 2x4f_A 245 --LKVNFGTPEFLAPEVVNYD---FVSFPTDMWSVGVI 277 (373)
T ss_dssp --CCCCCSSCTTCCHHHHTTC---BCCHHHHHHHHHHH
T ss_pred --cccccCCCcEeChhhccCC---CCCcHHhHHHHHHH
Confidence 2234699999999988764 45778999999986
No 146
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.97 E-value=7.3e-31 Score=279.78 Aligned_cols=189 Identities=26% Similarity=0.425 Sum_probs=163.2
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCCh----hhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCe
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGN----KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE 653 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~ 653 (782)
+.++|++.+.||+|+||.||+|.. .+++.||||++....... ...+.+.+|++++++++||||+++++++.+...
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD 89 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 346799999999999999999965 468999999997654322 246789999999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCC----cEEEE
Q 003982 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM----RAKVA 729 (782)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~----~~kL~ 729 (782)
.++||||+++++|.+++.. ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++ .+||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~ 161 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLI 161 (321)
T ss_dssp EEEEECCCCSCBHHHHHHT-----CSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred EEEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEc
Confidence 9999999999999999965 2458999999999999999999999 8999999999999999887 79999
Q ss_pred eeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 730 DFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 730 DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|||++........ .....||+.|+|||++.+. .++.++||||+|++
T Consensus 162 Dfg~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~i 207 (321)
T 2a2a_A 162 DFGLAHEIEDGVE--FKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVI 207 (321)
T ss_dssp CCTTCEECCTTCC--CCCCCSCGGGCCHHHHTTC---CCCTHHHHHHHHHH
T ss_pred cCccceecCcccc--ccccCCCCCccCcccccCC---CCCCccccHHHHHH
Confidence 9999987765332 2335689999999988764 34678999999986
No 147
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.97 E-value=3.5e-31 Score=282.55 Aligned_cols=196 Identities=29% Similarity=0.500 Sum_probs=147.6
Q ss_pred HhcCCCccceeecccceEEEEEEeCCC----cEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGELPDG----TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER 654 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~ 654 (782)
..++|++.+.||+|+||.||+|..... ..||||+++.........+++.+|++++++++||||+++++++.+....
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 346899999999999999999965433 2799999987654556678899999999999999999999999887665
Q ss_pred ------EEEEEccCCCCHHHHHHhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEE
Q 003982 655 ------LLVYEYMPRGTLAQHLFEWHDHG-YTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727 (782)
Q Consensus 655 ------~lv~e~~~~gsL~~~l~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~k 727 (782)
++||||+++|+|.+++....... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCCEE
Confidence 99999999999999997654321 2358999999999999999999999 8999999999999999999999
Q ss_pred EEeeccceecCCCCce-eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 728 VADFGLVKNAPDGKYS-VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 728 L~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|+|||+|+........ ......+++.|+|||++.+. .++.++||||+|++
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 228 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADN---LYTVHSDVWAFGVT 228 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCC---CCCCccchhhHHHH
Confidence 9999999876543322 22234578899999988765 35788999999986
No 148
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.97 E-value=2.6e-31 Score=286.03 Aligned_cols=198 Identities=32% Similarity=0.537 Sum_probs=164.6
Q ss_pred HHHHhcCCCccceeecccceEEEEEEeC------CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEE
Q 003982 576 LRQVTDNFSEANILGRGGFGVVYGGELP------DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCI 649 (782)
Q Consensus 576 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~ 649 (782)
+....++|++.+.||+|+||.||+|... +++.||||+++... .....+.+.+|++++++++||||+++++++.
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 120 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVCA 120 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 3445688999999999999999999653 34789999997543 3445678999999999999999999999999
Q ss_pred eCCeEEEEEEccCCCCHHHHHHhhccC-------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEE
Q 003982 650 NGSERLLVYEYMPRGTLAQHLFEWHDH-------------------GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIH 710 (782)
Q Consensus 650 ~~~~~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH 710 (782)
+.+..++||||+++|+|.+++...... ....+++.+++.++.|+++||+|||+ .||+|
T Consensus 121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~ivH 197 (343)
T 1luf_A 121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVH 197 (343)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCC
T ss_pred cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeec
Confidence 999999999999999999999874321 12568999999999999999999999 89999
Q ss_pred cCCCCCCEEECCCCcEEEEeeccceecCCCCc-eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 711 RDLKPSNILIGDDMRAKVADFGLVKNAPDGKY-SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 711 rDikp~NIll~~~~~~kL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|||||+||+++.++.+||+|||+++....... .......||+.|+|||++.+. .++.++||||+|++
T Consensus 198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~i 265 (343)
T 1luf_A 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYN---RYTTESDVWAYGVV 265 (343)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccC---CcCcccccHHHHHH
Confidence 99999999999999999999999986643322 222334679999999987654 35788999999986
No 149
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.97 E-value=6.1e-31 Score=275.35 Aligned_cols=190 Identities=27% Similarity=0.391 Sum_probs=158.7
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 658 (782)
.++|.+.+.||+|+||.||+|.. .+++.||+|++.... .....+.+.+|++++++++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 99 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR-SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM 99 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG-CCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc-cchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence 46799999999999999999955 568999999997654 2345688999999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEE---CCCCcEEEEeeccce
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI---GDDMRAKVADFGLVK 735 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll---~~~~~~kL~DfG~a~ 735 (782)
||+++|+|.+++...... ...+++.++..++.|++.||+|||+ .||+||||||+||++ +.++.+||+|||++.
T Consensus 100 e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 100 ETCEGGELLERIVSAQAR-GKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp CCCSCCBHHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EeCCCCcHHHHHHhhhhc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 999999999998764332 2468999999999999999999999 899999999999999 456789999999998
Q ss_pred ecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 736 NAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 736 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
...... ......||+.|+|||++.+. ++.++||||+|++
T Consensus 176 ~~~~~~--~~~~~~~t~~y~aPE~~~~~----~~~~~Di~slG~i 214 (285)
T 3is5_A 176 LFKSDE--HSTNAAGTALYMAPEVFKRD----VTFKCDIWSAGVV 214 (285)
T ss_dssp C------------CTTGGGCCHHHHTTC----CCHHHHHHHHHHH
T ss_pred ecCCcc--cCcCcccccCcCChHHhccC----CCcccCeehHHHH
Confidence 665432 22345689999999998765 4578999999986
No 150
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.97 E-value=1.7e-31 Score=285.64 Aligned_cols=190 Identities=23% Similarity=0.339 Sum_probs=151.1
Q ss_pred HhcCCCccceeecccceEEEEEE-eCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
..++|++.+.||+|+||+||+|. ..+++.||||+++.........+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 45789999999999999999995 45789999999976654444566788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEE-----CCCCcEEEEeec
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI-----GDDMRAKVADFG 732 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll-----~~~~~~kL~DfG 732 (782)
|||++ |+|.+++.. ...+++.++..++.|++.||+|||+ .||+||||||+||++ +.++.+||+|||
T Consensus 112 ~e~~~-~~L~~~~~~-----~~~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg 182 (329)
T 3gbz_A 112 FEYAE-NDLKKYMDK-----NPDVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFG 182 (329)
T ss_dssp EECCS-EEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred EecCC-CCHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcCC
Confidence 99997 599999876 2458999999999999999999999 899999999999999 455569999999
Q ss_pred cceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 733 LVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 733 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+++....... ......||+.|+|||++.+. ..++.++||||+||+
T Consensus 183 ~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~i 227 (329)
T 3gbz_A 183 LARAFGIPIR-QFTHEIITLWYRPPEILLGS--RHYSTSVDIWSIACI 227 (329)
T ss_dssp HHHHHC------------CCTTCCHHHHTTC--CCCCTHHHHHHHHHH
T ss_pred CccccCCccc-ccCCCcCCccccCHHHhcCC--CCCCcHHHHHHHHHH
Confidence 9987654322 22334689999999998763 124678999999986
No 151
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.97 E-value=4.5e-31 Score=297.83 Aligned_cols=188 Identities=27% Similarity=0.418 Sum_probs=162.4
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
+.++|++.+.||+|+||+||+|.. .+++.||||++............+.+|++++++++||||+++++++.+....++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 457899999999999999999965 4789999999976544445668899999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEEC---CCCcEEEEeeccc
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG---DDMRAKVADFGLV 734 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~---~~~~~kL~DfG~a 734 (782)
|||+++|+|.+.+... ..+++.++..++.|++.||.|||+ .||+||||||+||+++ .++.+||+|||+|
T Consensus 100 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 171 (486)
T 3mwu_A 100 GELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (486)
T ss_dssp ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCT
T ss_pred EEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcC
Confidence 9999999999988763 358999999999999999999999 8999999999999995 4568999999999
Q ss_pred eecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 735 KNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 735 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+...... .....+||+.|+|||++.+. ++.++||||+||+
T Consensus 172 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~----~~~~~DiwslG~i 211 (486)
T 3mwu_A 172 TCFQQNT--KMKDRIGTAYYIAPEVLRGT----YDEKCDVWSAGVI 211 (486)
T ss_dssp TTBCCC------CCTTGGGGCCGGGGGSC----CCHHHHHHHHHHH
T ss_pred eECCCCC--ccCCCcCCCCCCCHHHhCCC----CCchhhHHHHHHH
Confidence 8765433 22345799999999998875 4668999999986
No 152
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=5e-30 Score=285.71 Aligned_cols=248 Identities=24% Similarity=0.303 Sum_probs=193.1
Q ss_pred EEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCC
Q 003982 70 TISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNP 148 (782)
Q Consensus 70 ~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 148 (782)
.++..+.+++ .+|..+. ++++.|+|++|+|+++++ .|.++++|++|+|++|+|+.+++..|.++++|++|+|++|+
T Consensus 47 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 47 KVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 4445556666 6776665 689999999999998886 79999999999999999999998899999999999999999
Q ss_pred CCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCcccc
Q 003982 149 NLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTL 228 (782)
Q Consensus 149 l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~ 228 (782)
+.. ..+..|..+++|++|+|++|+|+.+.+..|..+++|++|+|++|+..+.++..
T Consensus 124 l~~--~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~---------------------- 179 (440)
T 3zyj_A 124 LTT--IPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEG---------------------- 179 (440)
T ss_dssp CSS--CCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTT----------------------
T ss_pred CCe--eCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcc----------------------
Confidence 887 34457888899999999999998888888888899999999886554455542
Q ss_pred ccccCCCCCcEEEeecccccCCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCCCCCCccEE
Q 003982 229 DVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPSKVQKV 308 (782)
Q Consensus 229 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 308 (782)
.|.++++|++|+|++|+++.. |.+..+++|+.|+|++|+|++..|..|.++++|+.|++++|++++
T Consensus 180 -~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~------------ 245 (440)
T 3zyj_A 180 -AFEGLSNLRYLNLAMCNLREI-PNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQV------------ 245 (440)
T ss_dssp -TTTTCSSCCEEECTTSCCSSC-CCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCE------------
T ss_pred -hhhcccccCeecCCCCcCccc-cccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeE------------
Confidence 245678888888888888744 457777777777777777777767777777777666666666653
Q ss_pred EccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCcccc
Q 003982 309 SLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYA 388 (782)
Q Consensus 309 ~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~ 388 (782)
..+..|.
T Consensus 246 -------------------------------------------------------------------------~~~~~~~ 252 (440)
T 3zyj_A 246 -------------------------------------------------------------------------IERNAFD 252 (440)
T ss_dssp -------------------------------------------------------------------------ECTTSST
T ss_pred -------------------------------------------------------------------------EChhhhc
Confidence 3445667
Q ss_pred ccccCCeEecccccccccCCccCCCCCCCCeEecCCCcCCCCC
Q 003982 389 NLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKV 431 (782)
Q Consensus 389 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~ 431 (782)
++++|++|+|++|+|++..+..|..+++|+.|+|++|++....
T Consensus 253 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 295 (440)
T 3zyj_A 253 NLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNC 295 (440)
T ss_dssp TCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSS
T ss_pred CCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCC
Confidence 7778888888888888777777788888888888888876543
No 153
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.97 E-value=2e-31 Score=288.93 Aligned_cols=202 Identities=25% Similarity=0.416 Sum_probs=165.8
Q ss_pred cHHHHHHHhcCCCccceeecccceEEEEEEe------CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhc-CCCCcceE
Q 003982 572 SIEVLRQVTDNFSEANILGRGGFGVVYGGEL------PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVAL 644 (782)
Q Consensus 572 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~ 644 (782)
.........++|++.+.||+|+||.||+|.+ .+++.||||+++... .....+.+.+|+++++++ +||||+++
T Consensus 13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC-CHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 4445555678999999999999999999953 346789999997543 344567899999999999 79999999
Q ss_pred EeEEEeCCe-EEEEEEccCCCCHHHHHHhhccCC----------------------------------------------
Q 003982 645 LGYCINGSE-RLLVYEYMPRGTLAQHLFEWHDHG---------------------------------------------- 677 (782)
Q Consensus 645 ~~~~~~~~~-~~lv~e~~~~gsL~~~l~~~~~~~---------------------------------------------- 677 (782)
++++.+.+. .++||||+++|+|.+++.......
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 999987654 899999999999999997643210
Q ss_pred ---------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecCCCC-
Q 003982 678 ---------------YTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGK- 741 (782)
Q Consensus 678 ---------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~~~~- 741 (782)
...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++......
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 1128999999999999999999999 899999999999999999999999999998764432
Q ss_pred ceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 742 YSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 742 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
........||+.|+|||++.+. .++.++||||+|++
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~i 284 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDR---VYTIQSDVWSFGVL 284 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred chhccccCCCceeEChhhhcCC---CCCchhhhhhHHHH
Confidence 2233445689999999988754 45789999999986
No 154
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.97 E-value=7.5e-31 Score=273.18 Aligned_cols=187 Identities=26% Similarity=0.458 Sum_probs=140.7
Q ss_pred cCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCC-hhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEE
Q 003982 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 658 (782)
++|++.+.||+|+||.||+|.. .+++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 6799999999999999999964 57899999999765432 234678999999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecC
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~ 738 (782)
||+ ++++.+++.. ...+++.++..++.|++.||+|||+ .||+||||||+||++++++.+||+|||++....
T Consensus 93 e~~-~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 163 (275)
T 2eue_A 93 EYA-GNELFDYIVQ-----RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp ECC-CEEHHHHHHT-----SSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCSSCC----
T ss_pred hhc-CCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeeccCChHhEEECCCCCEEEeecccceecc
Confidence 999 7788888765 2458999999999999999999999 899999999999999999999999999998665
Q ss_pred CCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 739 DGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.... .....||+.|+|||++.+. ...+.++||||+|++
T Consensus 164 ~~~~--~~~~~~t~~y~aPE~~~~~--~~~~~~~Di~slG~i 201 (275)
T 2eue_A 164 DGNF--LKTSCGSPNYAAPEVISGK--LYAGPEVDVWSCGVI 201 (275)
T ss_dssp -------------CTTCCHHHHCC-------THHHHHHHHHH
T ss_pred Cccc--ccCCCCCcCcCCceeeeCC--CCCCcccchHHHHHH
Confidence 4332 2334689999999998765 123578999999986
No 155
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.97 E-value=2.2e-31 Score=297.38 Aligned_cols=185 Identities=26% Similarity=0.362 Sum_probs=152.9
Q ss_pred hcCCCccceeecccceEEEEEE-eCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeC------C
Q 003982 580 TDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING------S 652 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~------~ 652 (782)
.++|++.+.||+|+||+||+|. ..+++.||||++..........+++.+|+++++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 5789999999999999999995 55789999999987654455678899999999999999999999998654 4
Q ss_pred eEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeec
Q 003982 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG 732 (782)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG 732 (782)
..|+||||+++ ++.+.+. ..+++.++..++.|++.||+|||+ .||+||||||+|||++.++.+||+|||
T Consensus 141 ~~~lv~E~~~~-~l~~~~~-------~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG 209 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQ-------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFG 209 (464)
T ss_dssp EEEEEEECCSE-EHHHHHT-------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred eEEEEEeCCCC-CHHHHHh-------hcCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEE
Confidence 57999999965 5666663 248999999999999999999999 899999999999999999999999999
Q ss_pred cceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 733 LVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 733 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+|+...... .....+||+.|+|||++.+. +++.++||||+||+
T Consensus 210 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~i 252 (464)
T 3ttj_A 210 LARTAGTSF--MMTPYVVTRYYRAPEVILGM---GYKENVDIWSVGCI 252 (464)
T ss_dssp CC-----CC--CC----CCCTTCCHHHHTTC---CCCTTHHHHHHHHH
T ss_pred eeeecCCCc--ccCCCcccccccCHHHHcCC---CCCHHHHHHHHHHH
Confidence 998765432 22345799999999998775 46778999999986
No 156
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=1.8e-30 Score=274.86 Aligned_cols=257 Identities=19% Similarity=0.242 Sum_probs=148.1
Q ss_pred CCCCCccccceEeCCCCCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCC
Q 003982 50 SSTGYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSV 128 (782)
Q Consensus 50 ~~~~~c~w~gv~c~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~ 128 (782)
+..+.|.|++|.|+.. +++ .+|..+. ++|++|+|++|+++.+++ .|.++++|++|+|++|+++.+
T Consensus 2 P~~C~C~~~~l~c~~~-----------~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 67 (306)
T 2z66_A 2 PSRCSCSGTEIRCNSK-----------GLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFK 67 (306)
T ss_dssp CTTCEEETTEEECCSS-----------CCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEE
T ss_pred cCCCeeCCCEEEcCCC-----------Ccc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcc
Confidence 4456689998888752 344 4444332 466666666666665554 356666666666666666543
Q ss_pred C--CCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCc-ccccCCCCCcEEEcccCcCCCCCCc
Q 003982 129 P--TGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIP-DFFDSFSNLQNLRLSYNNFTGSLPA 205 (782)
Q Consensus 129 ~--~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~ 205 (782)
. +..+.++++|++|+|++|++.. +|..+..+++|++|++++|++++..+ ..+..
T Consensus 68 ~~~~~~~~~~~~L~~L~Ls~n~i~~---l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~-------------------- 124 (306)
T 2z66_A 68 GCCSQSDFGTTSLKYLDLSFNGVIT---MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLS-------------------- 124 (306)
T ss_dssp EEEEHHHHSCSCCCEEECCSCSEEE---EEEEEETCTTCCEEECTTSEEESSTTTTTTTT--------------------
T ss_pred cCcccccccccccCEEECCCCcccc---ChhhcCCCCCCCEEECCCCcccccccchhhhh--------------------
Confidence 2 1223345555555555555443 33444444444444444444444332 33444
Q ss_pred cccccccchhhcccccCCCccccccccCCCCCcEEEeecccccCCCCC-CCCCCCCCEEEcCCCcCcc-CcchhhcCCCC
Q 003982 206 SFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPD-LSKCESLFDLSLRDNQLTG-VVPASVISLPA 283 (782)
Q Consensus 206 ~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~ 283 (782)
+++|++|++++|++++..+. +..+++|++|+|++|++++ .+|..+..+++
T Consensus 125 ----------------------------l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 176 (306)
T 2z66_A 125 ----------------------------LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRN 176 (306)
T ss_dssp ----------------------------CTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTT
T ss_pred ----------------------------ccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcC
Confidence 44555555555555444332 4455555555555555554 34555555555
Q ss_pred CCEEEccCCcccCCCCCCCCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCccc
Q 003982 284 LLNISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVT 363 (782)
Q Consensus 284 L~~L~l~~N~l~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 363 (782)
|++|++++|++++..|. .+
T Consensus 177 L~~L~Ls~n~l~~~~~~-------------------------------------------------------------~~ 195 (306)
T 2z66_A 177 LTFLDLSQCQLEQLSPT-------------------------------------------------------------AF 195 (306)
T ss_dssp CCEEECTTSCCCEECTT-------------------------------------------------------------TT
T ss_pred CCEEECCCCCcCCcCHH-------------------------------------------------------------Hh
Confidence 55555555555533221 12
Q ss_pred ccCCceeEEEccCcccccccCccccccccCCeEecccccccccCCccCCCCC-CCCeEecCCCcCCCCCC
Q 003982 364 CSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLA-SLQNLDVSNNNLSGKVP 432 (782)
Q Consensus 364 ~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~-~L~~L~ls~N~l~g~~p 432 (782)
..+++|++|+|++|.+++..+..+.++++|++|+|++|++++..|..+..++ +|+.|+|++|++++..+
T Consensus 196 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 196 NSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp TTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGG
T ss_pred cCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccC
Confidence 2233455555555555555555677788888888888888888888888884 88888888888887644
No 157
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.97 E-value=1e-30 Score=276.01 Aligned_cols=189 Identities=26% Similarity=0.498 Sum_probs=158.7
Q ss_pred cCCCccceeecccceEEEEEE-----eCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeC--Ce
Q 003982 581 DNFSEANILGRGGFGVVYGGE-----LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING--SE 653 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~--~~ 653 (782)
+.|++.+.||+|+||.||+|. ..+++.||||++.... .....+.+.+|++++++++||||+++++++.+. ..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 458889999999999999997 3468899999997654 234567899999999999999999999999876 66
Q ss_pred EEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeecc
Q 003982 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGL 733 (782)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~ 733 (782)
.++||||+++++|.+++.... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~ 172 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGL 172 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred EEEEEEeCCCCcHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECcccc
Confidence 899999999999999996532 358999999999999999999999 8999999999999999999999999999
Q ss_pred ceecCCCCc--eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 734 VKNAPDGKY--SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 734 a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+........ .......||..|+|||++.+. .++.++|+||+|++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 218 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQS---KFYIASDVWSFGVT 218 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCCHHHHHHC---EEEHHHHHHHHHHH
T ss_pred cccccCCCcceeccCCCCCCccccCCeeecCC---CCCcchhHHHHHHH
Confidence 988765432 222345688899999988654 35678999999986
No 158
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.97 E-value=8.1e-31 Score=286.72 Aligned_cols=190 Identities=24% Similarity=0.325 Sum_probs=158.4
Q ss_pred cCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcC--CCCcceEEeEEEeCCeEEEEE
Q 003982 581 DNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR--HRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~nI~~~~~~~~~~~~~~lv~ 658 (782)
++|++.+.||+|+||.||+|...+++.||||++..........+.+.+|++++++++ ||||+++++++..++..|+||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 569999999999999999998878999999999876655566788999999999996 599999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecC
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~ 738 (782)
| +.+++|.+++.. ...+++.++..++.|++.||.|||+ .||+||||||+|||++ ++.+||+|||+++...
T Consensus 136 E-~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 136 E-CGNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp E-CCSEEHHHHHHH-----CSSCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred e-cCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 9 558899999976 2358999999999999999999998 8999999999999995 5899999999998765
Q ss_pred CCCce-eeecccccccccCccccccch--------hhhHHHHHHHHHhccc
Q 003982 739 DGKYS-VETRLAGTFGYLAPEYAGKHW--------MILCQMTGLIWLHGSV 780 (782)
Q Consensus 739 ~~~~~-~~~~~~gt~~y~aPE~~~~~~--------~~~~~~~~dvws~Gvv 780 (782)
..... .....+||+.|+|||++.+.- ...++.++||||+||+
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvi 256 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCI 256 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHH
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHH
Confidence 43321 223457999999999886520 1236778999999986
No 159
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.97 E-value=2.5e-31 Score=296.99 Aligned_cols=188 Identities=26% Similarity=0.459 Sum_probs=161.4
Q ss_pred hcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 659 (782)
.++|++.+.||+|+||.||+|...++..||||+++... ...+.|.+|++++++++||||+++++++. .+..++|||
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS---BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC---ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 46788999999999999999998888999999997644 34678999999999999999999999986 667899999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecCC
Q 003982 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (782)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~~ 739 (782)
|+++|+|.+++..... ..+++.++..++.|++.||+|||+ .||+||||||+|||++.++.+||+|||+++....
T Consensus 263 ~~~~g~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~ 336 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDEG---SKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIED 336 (454)
T ss_dssp CCTTCBHHHHHHSHHH---HTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCC
T ss_pred ecCCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCC
Confidence 9999999999975322 247889999999999999999999 8999999999999999999999999999987654
Q ss_pred CCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 740 GKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..........+|+.|+|||++.+. .++.++||||+||+
T Consensus 337 ~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslG~~ 374 (454)
T 1qcf_A 337 NEYTAREGAKFPIKWTAPEAINFG---SFTIKSDVWSFGIL 374 (454)
T ss_dssp HHHHTTCSSSSCGGGSCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred CceeccCCCcccccccCHHHhccC---CCCcHHHHHhHHHH
Confidence 332222334567899999988654 35789999999986
No 160
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.97 E-value=7.2e-31 Score=289.95 Aligned_cols=192 Identities=24% Similarity=0.347 Sum_probs=151.3
Q ss_pred HHhcCCCccceeecccceEEEEEE-eCCCcEEEEEEeccccCC------hhhHHHHHHHHHHHHhcCCCCcceEEeEEEe
Q 003982 578 QVTDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMG------NKGLSEFQAEIAVLTKVRHRHLVALLGYCIN 650 (782)
Q Consensus 578 ~~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~ 650 (782)
...++|.+.+.||+|+||.||+|. ..+++.||||++...... ......+.+|++++++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 456899999999999999999995 457899999999765321 112335889999999999999999999975
Q ss_pred CCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCC---CcEE
Q 003982 651 GSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD---MRAK 727 (782)
Q Consensus 651 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~---~~~k 727 (782)
.+..++||||+++|+|.+++.. ...+++.++..++.|++.||+|||+ .||+||||||+||+++.+ ..+|
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~k 282 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIK 282 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTSS-----SCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEE
T ss_pred cCceEEEEEcCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEE
Confidence 5568999999999999888754 3468999999999999999999999 899999999999999754 4599
Q ss_pred EEeeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 728 L~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|+|||+|+...... .....+||+.|+|||++.+.-...++.++||||+||+
T Consensus 283 l~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~i 333 (419)
T 3i6u_A 283 ITDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 333 (419)
T ss_dssp ECCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHH
T ss_pred EeecccceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHH
Confidence 99999998765432 2234579999999999864322356789999999986
No 161
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.97 E-value=1.9e-31 Score=297.54 Aligned_cols=190 Identities=27% Similarity=0.358 Sum_probs=152.5
Q ss_pred hcCCCccceeecccceEEEEEE-eCCCcEEEEEEeccccC-ChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
.++|++.+.||+|+||.||+|. ..+++.||||++..... .......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 4679999999999999999995 45789999999976432 233456788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
|||+++|+|.+++... ..+++.++..++.|++.||+|||+ ..||+||||||+|||++.++.+||+|||+|+..
T Consensus 227 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~--~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 227 MEYANGGELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp ECCCSSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EeeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhh--cCCEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 9999999999998762 358999999999999999999995 269999999999999999999999999999864
Q ss_pred CCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 738 PDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..... .....+||+.|+|||++.+. .++.++||||+||+
T Consensus 300 ~~~~~-~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~i 338 (446)
T 4ejn_A 300 IKDGA-TMKTFCGTPEYLAPEVLEDN---DYGRAVDWWGLGVV 338 (446)
T ss_dssp CC------CCSSSCGGGCCHHHHHTS---CCCTHHHHHHHHHH
T ss_pred cCCCc-ccccccCCccccCHhhcCCC---CCCCccchhhhHHH
Confidence 43222 22346799999999998764 45778999999986
No 162
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.97 E-value=2.6e-31 Score=288.46 Aligned_cols=194 Identities=25% Similarity=0.415 Sum_probs=160.8
Q ss_pred hcCCCccceeecccceEEEEEEeC------CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCe
Q 003982 580 TDNFSEANILGRGGFGVVYGGELP------DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE 653 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~ 653 (782)
.++|++.+.||+|+||.||+|... +++.||||+++... ......++.+|+.++++++||||+++++++.+...
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 148 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 148 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc-ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 467899999999999999999742 46789999996532 34456678999999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHHHhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCC---cEEE
Q 003982 654 RLLVYEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM---RAKV 728 (782)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~---~~kL 728 (782)
.++||||+++|+|.+++...... ....+++.+++.++.|++.||+|||+ .||+||||||+|||++.++ .+||
T Consensus 149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceEEE
Confidence 99999999999999999875432 12458999999999999999999999 8999999999999999554 5999
Q ss_pred EeeccceecCCCC-ceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 729 ADFGLVKNAPDGK-YSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 729 ~DfG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+|||+|+...... ........||+.|+|||++.+. .++.++||||+||+
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~DvwslG~i 275 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEG---IFTSKTDTWSFGVL 275 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCC---CCCcHHHHHHHHHH
Confidence 9999997543221 1122334679999999988654 45778999999986
No 163
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.97 E-value=7.3e-31 Score=296.62 Aligned_cols=188 Identities=26% Similarity=0.406 Sum_probs=157.3
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
+.++|++.+.||+|+||+||+|.. .++..||+|++............+.+|+++++.++||||+++++++.+....++|
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 346799999999999999999965 4788999999987654445567899999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCC---CcEEEEeeccc
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD---MRAKVADFGLV 734 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~---~~~kL~DfG~a 734 (782)
|||+++|+|.+.+... ..+++.++..++.|++.||.|||+ .||+||||||+||+++.. +.+||+|||+|
T Consensus 115 ~e~~~~g~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a 186 (494)
T 3lij_A 115 MECYKGGELFDEIIHR-----MKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLS 186 (494)
T ss_dssp EECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCC
Confidence 9999999999988663 458999999999999999999999 899999999999999764 55999999999
Q ss_pred eecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 735 KNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 735 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+...... .....+||+.|+|||++.+. ++.++||||+||+
T Consensus 187 ~~~~~~~--~~~~~~gt~~y~aPE~l~~~----~~~~~DiwslG~i 226 (494)
T 3lij_A 187 AVFENQK--KMKERLGTAYYIAPEVLRKK----YDEKCDVWSIGVI 226 (494)
T ss_dssp EECBTTB--CBCCCCSCTTTCCHHHHTTC----BCTHHHHHHHHHH
T ss_pred eECCCCc--cccccCCCcCeeCHHHHccc----CCCchhHHHHHHH
Confidence 8775433 22345799999999998765 4568999999986
No 164
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.97 E-value=3.8e-31 Score=274.02 Aligned_cols=187 Identities=28% Similarity=0.463 Sum_probs=162.3
Q ss_pred cCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEEEc
Q 003982 581 DNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 660 (782)
++|++.+.||+|+||.||+|...+++.||+|++..... ..+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 57889999999999999999888889999999986542 346799999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecCCC
Q 003982 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDG 740 (782)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~~~ 740 (782)
+++++|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++......
T Consensus 85 ~~~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 85 MEHGCLSDYLRTQ----RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp CTTCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred CCCCcHHHHHhhC----cccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEcccccccccccc
Confidence 9999999999763 2358999999999999999999999 89999999999999999999999999999876543
Q ss_pred CceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 741 KYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 741 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.........+++.|+|||++.+. .++.++|+||+|++
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 194 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFS---RYSSKSDVWSFGVL 194 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred cccccccccccccccChhhhcCC---CccchhchhhhHHH
Confidence 32222334578899999988654 35678999999986
No 165
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.97 E-value=5.2e-31 Score=275.28 Aligned_cols=189 Identities=23% Similarity=0.381 Sum_probs=147.6
Q ss_pred hcCCCccceeecccceEEEEEEeC----CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELP----DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL 655 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~ 655 (782)
.++|++.+.||+|+||.||+|... .+..||+|+++... .....+.+.+|+.++++++||||+++++++. ++..+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 467899999999999999999653 24579999987543 3445678999999999999999999999974 56789
Q ss_pred EEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccce
Q 003982 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (782)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~ 735 (782)
+||||+++++|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++
T Consensus 92 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 164 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSR 164 (281)
T ss_dssp EEEECCTTEEHHHHHHHT----TTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred EEEecCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECcccccc
Confidence 999999999999999752 2358999999999999999999999 899999999999999999999999999998
Q ss_pred ecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 736 NAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 736 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..............+|+.|+|||++.+. .++.++||||+|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~ 206 (281)
T 1mp8_A 165 YMEDSTYYKASKGKLPIKWMAPESINFR---RFTSASDVWMFGVC 206 (281)
T ss_dssp --------------CCGGGCCHHHHHHC---CCSHHHHHHHHHHH
T ss_pred ccCcccccccccCCCcccccChhhcccC---CCCCccCchHHHHH
Confidence 7765443333334578899999988653 45778999999985
No 166
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=1.1e-29 Score=284.05 Aligned_cols=248 Identities=23% Similarity=0.287 Sum_probs=197.7
Q ss_pred EEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCC
Q 003982 71 ISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPN 149 (782)
Q Consensus 71 L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 149 (782)
++.++.+++ .+|..+. ++|++|+|++|+|+++++ .|.++++|++|+|++|+|+.+++..|.++++|++|+|++|++
T Consensus 59 v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 59 VVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp EECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred EEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 334444565 5666554 689999999999999877 799999999999999999999999999999999999999998
Q ss_pred CCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccc
Q 003982 150 LAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLD 229 (782)
Q Consensus 150 ~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~ 229 (782)
.. ..+..|..+++|++|+|++|+++.+.+..|..+++|++|++++|+..+.++..
T Consensus 136 ~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~----------------------- 190 (452)
T 3zyi_A 136 TV--IPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEG----------------------- 190 (452)
T ss_dssp SB--CCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTT-----------------------
T ss_pred Cc--cChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChh-----------------------
Confidence 87 44556888999999999999998888888999999999999986544455543
Q ss_pred cccCCCCCcEEEeecccccCCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCCCCCCccEEE
Q 003982 230 VLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPSKVQKVS 309 (782)
Q Consensus 230 ~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 309 (782)
.|.++++|++|+|++|++++. +.+..+++|+.|+|++|+|++..|..|.++++|+.|++++|++++
T Consensus 191 ~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~------------- 256 (452)
T 3zyi_A 191 AFEGLFNLKYLNLGMCNIKDM-PNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL------------- 256 (452)
T ss_dssp TTTTCTTCCEEECTTSCCSSC-CCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCE-------------
T ss_pred hccCCCCCCEEECCCCccccc-ccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCce-------------
Confidence 245688888888888888865 567788888888888888887778888877777777777777663
Q ss_pred ccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccc
Q 003982 310 LDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYAN 389 (782)
Q Consensus 310 l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~ 389 (782)
..|..|.+
T Consensus 257 ------------------------------------------------------------------------~~~~~~~~ 264 (452)
T 3zyi_A 257 ------------------------------------------------------------------------IERNAFDG 264 (452)
T ss_dssp ------------------------------------------------------------------------ECTTTTTT
T ss_pred ------------------------------------------------------------------------ECHHHhcC
Confidence 33455677
Q ss_pred cccCCeEecccccccccCCccCCCCCCCCeEecCCCcCCCCCC
Q 003982 390 LTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVP 432 (782)
Q Consensus 390 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p 432 (782)
+++|++|+|++|+|++..+..|..+++|+.|+|++|++.....
T Consensus 265 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 265 LASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp CTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred CCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 7788888888888887777777888888888888888776543
No 167
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.97 E-value=8.2e-31 Score=272.04 Aligned_cols=188 Identities=22% Similarity=0.320 Sum_probs=162.1
Q ss_pred hcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeC--CeEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING--SERLLV 657 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~--~~~~lv 657 (782)
.++|++.+.||+|+||.||+|.. +++.||||++..........+.+.+|++++++++||||+++++++.+. ...++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 35789999999999999999987 489999999987665566678899999999999999999999999887 778999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eEEcCCCCCCEEECCCCcEEEEeeccce
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQS--FIHRDLKPSNILIGDDMRAKVADFGLVK 735 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~--ivHrDikp~NIll~~~~~~kL~DfG~a~ 735 (782)
|||+++|+|.+++... ....+++.++..++.|++.||+|||+ .| |+||||||+||+++.++.++|+|||++.
T Consensus 88 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~ 161 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEG---TNFVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKF 161 (271)
T ss_dssp EECCTTCBHHHHHHSC---SSCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCC
T ss_pred ecccCCCcHHHHHhhc---ccCCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEecccee
Confidence 9999999999999752 22358999999999999999999998 78 9999999999999999999999999876
Q ss_pred ecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 736 NAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 736 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..... ...||+.|+|||++.+.-......++||||+|++
T Consensus 162 ~~~~~------~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~i 200 (271)
T 3kmu_A 162 SFQSP------GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVL 200 (271)
T ss_dssp TTSCT------TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHH
T ss_pred eeccc------CccCCccccChhhhccCCCCCCCchhhHHHHHHH
Confidence 54332 2368999999999876533334568999999986
No 168
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.97 E-value=8e-31 Score=278.50 Aligned_cols=194 Identities=27% Similarity=0.451 Sum_probs=163.7
Q ss_pred hcCCCccceeecccceEEEEEEe------CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCe
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL------PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE 653 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~ 653 (782)
.++|.+.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|++++++++||||+++++++.+.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 46789999999999999999964 345789999997543 34566789999999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHHHhhccC-------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCC
Q 003982 654 RLLVYEYMPRGTLAQHLFEWHDH-------------------GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLK 714 (782)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik 714 (782)
.++||||+++++|.+++...... ....+++.++..++.|++.||+|||+ .||+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccccc
Confidence 99999999999999999874321 12348999999999999999999999 899999999
Q ss_pred CCCEEECCCCcEEEEeeccceecCCCCce-eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 715 PSNILIGDDMRAKVADFGLVKNAPDGKYS-VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 715 p~NIll~~~~~~kL~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|+||+++.++.+||+|||+++........ ......+|+.|+|||++.+. .++.++||||+|++
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 241 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDH---IYTTQSDVWSFGVL 241 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHC---EECHHHHHHHHHHH
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCC---CcCchhhHHHHHHH
Confidence 99999999999999999999877554322 22334578899999988764 45788999999986
No 169
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=3e-31 Score=285.83 Aligned_cols=201 Identities=25% Similarity=0.329 Sum_probs=159.6
Q ss_pred HHHHhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccC---ChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeC
Q 003982 576 LRQVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM---GNKGLSEFQAEIAVLTKVRHRHLVALLGYCING 651 (782)
Q Consensus 576 l~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~ 651 (782)
+..+.++|++.+.||+|+||.||+|.. .+++.||+|++..... .....+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 345678899999999999999999954 5788999999975431 234567899999999999999999999999999
Q ss_pred CeEEEEEEccCCCCHHHHHHhhccCC-----------------------------------CCCCCHHHHHHHHHHHHHH
Q 003982 652 SERLLVYEYMPRGTLAQHLFEWHDHG-----------------------------------YTPLTWKQRVTIALDVARG 696 (782)
Q Consensus 652 ~~~~lv~e~~~~gsL~~~l~~~~~~~-----------------------------------~~~l~~~~~~~i~~qi~~a 696 (782)
+..++||||+++|+|.+++....... ...+++..+..++.|++.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 99999999999999999985322110 1124677888999999999
Q ss_pred HHHHhhcCCCCeEEcCCCCCCEEECCCC--cEEEEeeccceecCCC---CceeeecccccccccCccccccchhhhHHHH
Q 003982 697 VEYLHSLAQQSFIHRDLKPSNILIGDDM--RAKVADFGLVKNAPDG---KYSVETRLAGTFGYLAPEYAGKHWMILCQMT 771 (782)
Q Consensus 697 L~~LH~~~~~~ivHrDikp~NIll~~~~--~~kL~DfG~a~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 771 (782)
|+|||+ .||+||||||+||+++.++ .+||+|||+++..... .........||+.|+|||++.+. ...++.+
T Consensus 181 l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~ 256 (345)
T 3hko_A 181 LHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTT-NESYGPK 256 (345)
T ss_dssp HHHHHH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCS-SSCCCTH
T ss_pred HHHHHH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccC-CCCCCcH
Confidence 999999 8999999999999998776 8999999999865432 11122345799999999988642 0134668
Q ss_pred HHHHHhccc
Q 003982 772 GLIWLHGSV 780 (782)
Q Consensus 772 ~dvws~Gvv 780 (782)
+||||+|++
T Consensus 257 ~DiwslG~i 265 (345)
T 3hko_A 257 CDAWSAGVL 265 (345)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999986
No 170
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.97 E-value=8.9e-31 Score=277.49 Aligned_cols=191 Identities=24% Similarity=0.316 Sum_probs=153.6
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCC-hhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLL 656 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l 656 (782)
..++|++.+.||+|+||.||+|.. .+++.||+|++...... ....+.+.+|++++++++||||+++++++.+++..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 357899999999999999999965 47889999999765432 2345789999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeecccee
Q 003982 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (782)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~ 736 (782)
||||+++++|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++..
T Consensus 112 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~ 183 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQ-----GPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASA 183 (309)
T ss_dssp EEECCCCEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC---
T ss_pred EEEecCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCcc
Confidence 99999999999999763 358999999999999999999999 8999999999999999999999999999987
Q ss_pred cCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 737 APDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 737 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.............||+.|+|||++.+. .++.++|+||+|++
T Consensus 184 ~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 224 (309)
T 2h34_A 184 TTDEKLTQLGNTVGTLYYMAPERFSES---HATYRADIYALTCV 224 (309)
T ss_dssp -------------CCGGGCCGGGTCC-------CCCHHHHHHHH
T ss_pred ccccccccccccCCCcCccCHHHHcCC---CCCchHhHHHHHHH
Confidence 655433333445789999999998764 45667899999986
No 171
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.97 E-value=9e-31 Score=281.76 Aligned_cols=188 Identities=27% Similarity=0.381 Sum_probs=158.7
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCC-hhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
.+.|+..+.||+|+||.||+|.. .+++.||||++...... ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 34589999999999999999964 67899999999765432 33457789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
|||++ |++.+++... ..++++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++..
T Consensus 133 ~e~~~-g~l~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 204 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 204 (348)
T ss_dssp EECCS-EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSS
T ss_pred EecCC-CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceec
Confidence 99996 6888887653 2458999999999999999999999 89999999999999999999999999999766
Q ss_pred CCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 738 PDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
... ....||+.|+|||++.+.-.-.++.++||||+||+
T Consensus 205 ~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~i 242 (348)
T 1u5q_A 205 APA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 242 (348)
T ss_dssp SSB-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHH
T ss_pred CCC-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHH
Confidence 432 23578999999998742111234668999999986
No 172
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.97 E-value=5.3e-31 Score=276.28 Aligned_cols=190 Identities=29% Similarity=0.489 Sum_probs=165.0
Q ss_pred HhcCCCccceeecccceEEEEEEeC-CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
..++|++.+.||+|+||.||+|... ++..||+|++.... ...+.+.+|++++++++||||+++++++.+++..++|
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v 87 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS---THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH---HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence 3467899999999999999999654 58899999997543 4567899999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
|||+++++|.+++.... ...+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++...
T Consensus 88 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~ 161 (288)
T 3kfa_A 88 TEFMTYGNLLDYLRECN---RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLM 161 (288)
T ss_dssp EECCTTEEHHHHHHHCC---TTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTS
T ss_pred EEcCCCCcHHHHHHhcc---cCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceec
Confidence 99999999999997632 3458999999999999999999999 89999999999999999999999999999877
Q ss_pred CCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 738 PDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
............+|+.|+|||++.+. .++.++||||+|++
T Consensus 162 ~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 201 (288)
T 3kfa_A 162 TGDTYTAHAGAKFPIKWTAPESLAYN---KFSIKSDVWAFGVL 201 (288)
T ss_dssp CSSSSEEETTEEECGGGCCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred cCCccccccCCccccCcCChhhhccC---CCCchhhHHHHHHH
Confidence 65554444445678899999988654 45778999999986
No 173
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.97 E-value=1.2e-30 Score=272.29 Aligned_cols=188 Identities=28% Similarity=0.486 Sum_probs=161.4
Q ss_pred hcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 659 (782)
.++|++.+.||+|+||.||+|...+++.||||++.... ...+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e 87 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITE 87 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc---ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEe
Confidence 46789999999999999999988888899999997644 34578999999999999999999999876 456899999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecCC
Q 003982 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (782)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~~ 739 (782)
|+++++|.+++..... ..+++.++..++.|++.||+|||+ .||+||||||+||++++++.+||+|||++.....
T Consensus 88 ~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 88 YMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp CCTTCBHHHHTTSHHH---HTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCCHHHHHhcCCC---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 9999999999865321 258999999999999999999999 8999999999999999999999999999988765
Q ss_pred CCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 740 GKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..........+++.|+|||++.+. .++.++||||+|++
T Consensus 162 ~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 199 (279)
T 1qpc_A 162 NEYTAREGAKFPIKWTAPEAINYG---TFTIKSDVWSFGIL 199 (279)
T ss_dssp SCEECCTTCCCCTTTSCHHHHHHC---EECHHHHHHHHHHH
T ss_pred cccccccCCCCccCccChhhhccC---CCCchhhhHHHHHH
Confidence 544333444578899999988654 35778999999986
No 174
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.97 E-value=2.6e-30 Score=271.86 Aligned_cols=189 Identities=24% Similarity=0.388 Sum_probs=162.9
Q ss_pred hcCCCccceeecccceEEEEEEeC-CCcEEEEEEeccccC-ChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
.++|.+.+.||+|+||.||+|... +++.||+|++..... .....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 467899999999999999999654 678999999976543 234567789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
|||+++++|.+++... ..+++.++..++.|+++||+|||+ .||+||||||+||+++.++.+||+|||++...
T Consensus 94 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 165 (294)
T 2rku_A 94 LELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 165 (294)
T ss_dssp EECCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceec
Confidence 9999999999988652 358999999999999999999999 89999999999999999999999999999876
Q ss_pred CCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 738 PDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..... ......||+.|+|||++.+. ....++|+||+|++
T Consensus 166 ~~~~~-~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~ 204 (294)
T 2rku_A 166 EYDGE-RKKVLCGTPNYIAPEVLSKK---GHSFEVDVWSIGCI 204 (294)
T ss_dssp CSTTC-CBCCCCSCCSSCCHHHHTTS---CBCTHHHHHHHHHH
T ss_pred ccCcc-ccccccCCCCcCCcchhccC---CCCchhhHHHHHHH
Confidence 54322 22335689999999998764 34678999999986
No 175
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.97 E-value=9.9e-31 Score=280.04 Aligned_cols=190 Identities=24% Similarity=0.397 Sum_probs=157.9
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 658 (782)
.++|++.+.||+|+||.||+|.. .+++.||||++..........+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 46799999999999999999965 45899999999766554556677899999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecC
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~ 738 (782)
||++++++.++... ...+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++...
T Consensus 104 e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 175 (331)
T 4aaa_A 104 EFVDHTILDDLELF-----PNGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175 (331)
T ss_dssp ECCSEEHHHHHHHS-----TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred ecCCcchHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence 99999888877643 2458999999999999999999999 899999999999999999999999999998765
Q ss_pred CCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 739 DGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.... ......||+.|+|||++.+. ..++.++||||+|++
T Consensus 176 ~~~~-~~~~~~~t~~y~aPE~~~~~--~~~~~~~Di~slG~i 214 (331)
T 4aaa_A 176 APGE-VYDDEVATRWYRAPELLVGD--VKYGKAVDVWAIGCL 214 (331)
T ss_dssp ---------CCCCCTTCCHHHHTTC--TTCCTHHHHHHHHHH
T ss_pred CCcc-ccCCCcCCccccCcccccCC--CCcchHHHHHHHHHH
Confidence 4322 22335689999999988764 234678999999986
No 176
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.97 E-value=2.1e-31 Score=281.42 Aligned_cols=187 Identities=26% Similarity=0.382 Sum_probs=145.7
Q ss_pred hcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHh--cCCCCcceEEeEEEeCC----e
Q 003982 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTK--VRHRHLVALLGYCINGS----E 653 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~nI~~~~~~~~~~~----~ 653 (782)
.++|++.+.||+|+||.||+|.. +++.||||++... ....+.+|.+++.. ++||||+++++++.+.. .
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 75 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T-----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEE
T ss_pred cceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc-----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccce
Confidence 46899999999999999999987 5899999998643 34667788888887 78999999999998876 7
Q ss_pred EEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCCeEEcCCCCCCEEECCCCc
Q 003982 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLH--------SLAQQSFIHRDLKPSNILIGDDMR 725 (782)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH--------~~~~~~ivHrDikp~NIll~~~~~ 725 (782)
.++||||+++|+|.+++.. ..+++.++..++.|++.||+||| + .||+||||||+||+++.++.
T Consensus 76 ~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nil~~~~~~ 146 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNGT 146 (303)
T ss_dssp EEEEEECCTTCCHHHHHHH------CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCB---C-CCCSCCCGGGC-CCTTCC
T ss_pred eEEEEeccCCCCHHHHHhc------cCcchHHHHHHHHHHHHHHHHHHHHHhhhccC---CCEeeCcCCHHHeEECCCCC
Confidence 8999999999999999965 24788889999999999999999 6 89999999999999999999
Q ss_pred EEEEeeccceecCCCCcee---eecccccccccCccccccchh---hhHHHHHHHHHhcccC
Q 003982 726 AKVADFGLVKNAPDGKYSV---ETRLAGTFGYLAPEYAGKHWM---ILCQMTGLIWLHGSVG 781 (782)
Q Consensus 726 ~kL~DfG~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~---~~~~~~~dvws~Gvv~ 781 (782)
+||+|||+|+......... .....||+.|+|||++.+... ..++.++||||+||+-
T Consensus 147 ~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il 208 (303)
T 3gxj_A 147 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF 208 (303)
T ss_dssp C-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC
T ss_pred EEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHH
Confidence 9999999997665433221 123469999999999876422 1456789999999973
No 177
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.97 E-value=2e-30 Score=277.98 Aligned_cols=189 Identities=24% Similarity=0.386 Sum_probs=163.2
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccC-ChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
.++|.+.+.||+|+||.||+|.. .+++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 46799999999999999999965 4578999999976543 234567789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
|||+++++|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++...
T Consensus 120 ~e~~~~~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 191 (335)
T 2owb_A 120 LELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 191 (335)
T ss_dssp ECCCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecCCCCCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceec
Confidence 9999999999988652 358999999999999999999999 89999999999999999999999999999876
Q ss_pred CCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 738 PDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..... ......||+.|+|||++.+. .+..++||||+|++
T Consensus 192 ~~~~~-~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~i 230 (335)
T 2owb_A 192 EYDGE-RKKVLCGTPNYIAPEVLSKK---GHSFEVDVWSIGCI 230 (335)
T ss_dssp CSTTC-CBCCCCSCCSSCCHHHHHTS---CBCTHHHHHHHHHH
T ss_pred ccCcc-cccccCCCccccCHHHhccC---CCCchhhHHHHHHH
Confidence 54322 22345789999999988764 34678999999986
No 178
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=2.9e-30 Score=277.09 Aligned_cols=194 Identities=25% Similarity=0.416 Sum_probs=156.4
Q ss_pred cHHHHHHHhcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhc--CCCCcceEEeEEE
Q 003982 572 SIEVLRQVTDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV--RHRHLVALLGYCI 649 (782)
Q Consensus 572 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l--~h~nI~~~~~~~~ 649 (782)
+........++|++.+.||+|+||.||+|+. .++.||||++.... ...+.+|.+++... +||||+++++++.
T Consensus 28 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~ 101 (337)
T 3mdy_A 28 PLLVQRTIAKQIQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTTE-----EASWFRETEIYQTVLMRHENILGFIAADI 101 (337)
T ss_dssp CHHHHTTHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEE
T ss_pred CcccccccccceEEEeEeecCCCeEEEEEEE-CCceEEEEEEeccc-----cchhhhHHHHHHHHhhcCCCeeeEEEEEc
Confidence 3444556678999999999999999999987 48999999986432 34455566666554 8999999999998
Q ss_pred eC----CeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC--------CeEEcCCCCCC
Q 003982 650 NG----SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQ--------SFIHRDLKPSN 717 (782)
Q Consensus 650 ~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~--------~ivHrDikp~N 717 (782)
+. ...++||||+++|+|.+++.. ..+++.++..++.|++.||+|||+ . ||+||||||+|
T Consensus 102 ~~~~~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~~~~ivH~Dikp~N 172 (337)
T 3mdy_A 102 KGTGSWTQLYLITDYHENGSLYDYLKS------TTLDAKSMLKLAYSSVSGLCHLHT---EIFSTQGKPAIAHRDLKSKN 172 (337)
T ss_dssp ESCGGGCEEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHS---CBCSTTCBCCEECSCCCGGG
T ss_pred cCCCCCCceEEEEeccCCCcHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHH---hhhhhccCCCEEecccchHH
Confidence 87 788999999999999999965 358999999999999999999998 6 99999999999
Q ss_pred EEECCCCcEEEEeeccceecCCCCcee---eecccccccccCccccccch---hhhHHHHHHHHHhccc
Q 003982 718 ILIGDDMRAKVADFGLVKNAPDGKYSV---ETRLAGTFGYLAPEYAGKHW---MILCQMTGLIWLHGSV 780 (782)
Q Consensus 718 Ill~~~~~~kL~DfG~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~---~~~~~~~~dvws~Gvv 780 (782)
|+++.++.+||+|||+|+......... .....||+.|+|||++.+.. ......++||||+||+
T Consensus 173 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~i 241 (337)
T 3mdy_A 173 ILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLI 241 (337)
T ss_dssp EEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHH
T ss_pred EEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHH
Confidence 999999999999999998765433221 12357999999999876541 1223456899999986
No 179
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.97 E-value=2.2e-30 Score=293.55 Aligned_cols=188 Identities=24% Similarity=0.391 Sum_probs=159.0
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCCh-----------hhHHHHHHHHHHHHhcCCCCcceEEe
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGN-----------KGLSEFQAEIAVLTKVRHRHLVALLG 646 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~h~nI~~~~~ 646 (782)
+.++|++.+.||+|+||+||+|.. .+++.||||++....... ...+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 467899999999999999999965 468899999997654321 34577899999999999999999999
Q ss_pred EEEeCCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCC--
Q 003982 647 YCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM-- 724 (782)
Q Consensus 647 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~-- 724 (782)
++.+....++||||+++|+|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~ 185 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINR-----HKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSL 185 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCC
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCC
Confidence 999999999999999999999998763 358999999999999999999999 8999999999999998775
Q ss_pred -cEEEEeeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 725 -RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 725 -~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.+||+|||+|........ ....+||+.|+|||++.+. ++.++||||+||+
T Consensus 186 ~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~----~~~~~DiwslG~i 236 (504)
T 3q5i_A 186 LNIKIVDFGLSSFFSKDYK--LRDRLGTAYYIAPEVLKKK----YNEKCDVWSCGVI 236 (504)
T ss_dssp SSEEECCCTTCEECCTTSC--BCCCCSCTTTCCHHHHTTC----BCTHHHHHHHHHH
T ss_pred ccEEEEECCCCEEcCCCCc--cccccCCcCCCCHHHhccC----CCchHHHHHHHHH
Confidence 699999999987765332 2345799999999998765 4568899999986
No 180
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=6.2e-31 Score=285.32 Aligned_cols=185 Identities=25% Similarity=0.402 Sum_probs=153.4
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCC------
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS------ 652 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~------ 652 (782)
.++|++.+.||+|+||.||+|.. .+|+.||||++..........+++.+|+++++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46899999999999999999955 57999999999765544556778999999999999999999999987653
Q ss_pred eEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeec
Q 003982 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG 732 (782)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG 732 (782)
..|+||||+ +++|.+++.. ..+++.++..++.|+++||+|||+ .||+||||||+||+++.++.+||+|||
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg 173 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH------EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFG 173 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred eEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeee
Confidence 459999999 8899998865 358999999999999999999999 899999999999999999999999999
Q ss_pred cceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 733 LVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 733 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+++...... ...+||+.|+|||++.+. ..++.++||||+|++
T Consensus 174 ~a~~~~~~~----~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~i 215 (367)
T 1cm8_A 174 LARQADSEM----TGYVVTRWYRAPEVILNW--MRYTQTVDIWSVGCI 215 (367)
T ss_dssp TCEECCSSC----CSSCSCGGGCCTHHHHTT--TCCCTTHHHHHHHHH
T ss_pred ccccccccc----CcCcCCCCcCCHHHHhCC--CCCChhhhHHHHHHH
Confidence 998765422 345789999999987652 235678999999986
No 181
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.97 E-value=1.2e-30 Score=281.77 Aligned_cols=191 Identities=25% Similarity=0.356 Sum_probs=159.9
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeC-------
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING------- 651 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~------- 651 (782)
.++|++.+.||+|+||.||+|.. .+++.||||++............+.+|++++++++||||+++++++.+.
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 36799999999999999999965 6789999999976654445567788999999999999999999999873
Q ss_pred -CeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEe
Q 003982 652 -SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVAD 730 (782)
Q Consensus 652 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~D 730 (782)
+..++||||+++ ++.+.+... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~D 167 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNV----LVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLAD 167 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECC
T ss_pred CceEEEEEeccCC-CHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEcc
Confidence 468999999964 787777542 2458999999999999999999999 8999999999999999999999999
Q ss_pred eccceecCCCCc---eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 731 FGLVKNAPDGKY---SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 731 fG~a~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
||+|+....... .......||+.|+|||++.+. ..++.++||||+||+
T Consensus 168 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwslG~i 218 (351)
T 3mi9_A 168 FGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGE--RDYGPPIDLWGAGCI 218 (351)
T ss_dssp CTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTC--CSCCTHHHHHHHHHH
T ss_pred chhcccccccccccccccCCcccccCccCchhhcCC--CCCCcHhHHHHHHHH
Confidence 999987653221 122345789999999988653 234678999999986
No 182
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.97 E-value=1.2e-30 Score=276.33 Aligned_cols=191 Identities=26% Similarity=0.377 Sum_probs=154.8
Q ss_pred HHhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCC---hhhHHHHHHHHHHHHhcC---CCCcceEEeEEEe
Q 003982 578 QVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG---NKGLSEFQAEIAVLTKVR---HRHLVALLGYCIN 650 (782)
Q Consensus 578 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~---h~nI~~~~~~~~~ 650 (782)
...++|++.+.||+|+||+||+|.. .+++.||||++...... ......+.+|++++++++ ||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 3467999999999999999999964 57899999999754321 122356677887777665 9999999999987
Q ss_pred CC-----eEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCc
Q 003982 651 GS-----ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR 725 (782)
Q Consensus 651 ~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~ 725 (782)
.. ..++||||++ ++|.+++.... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~ 158 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAP---PPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGT 158 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCC---TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSC
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCC
Confidence 65 5799999996 69999987532 2348999999999999999999999 89999999999999999999
Q ss_pred EEEEeeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 726 AKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 726 ~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+||+|||+++...... ......||+.|+|||++.+. .++.++||||+||+
T Consensus 159 ~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~i 208 (308)
T 3g33_A 159 VKLADFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQS---TYATPVDMWSVGCI 208 (308)
T ss_dssp EEECSCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTS---CCCSTHHHHHHHHH
T ss_pred EEEeeCccccccCCCc--ccCCccccccccCchHHcCC---CCCchHHHHHHHHH
Confidence 9999999998665432 22445789999999988654 34668999999986
No 183
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.97 E-value=6e-31 Score=293.57 Aligned_cols=188 Identities=30% Similarity=0.495 Sum_probs=154.9
Q ss_pred hcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 659 (782)
.++|++.+.||+|+||.||+|...++..||||+++... ...+.|.+|++++++++||||+++++++.+ +..++|||
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 45788999999999999999988888889999997654 235689999999999999999999999876 67899999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecCC
Q 003982 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (782)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~~ 739 (782)
|+++|+|.+++..... ..+++.++..++.|++.||+|||+ +||+||||||+|||++.++.+||+|||+++....
T Consensus 259 ~~~~gsL~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 259 YMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp CCTTCBHHHHHSHHHH---TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred hhcCCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 9999999999975322 348999999999999999999999 8999999999999999999999999999987755
Q ss_pred CCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 740 GKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..........+++.|+|||++.+. .++.++||||+||+
T Consensus 333 ~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~sDvwslG~~ 370 (452)
T 1fmk_A 333 NEYTARQGAKFPIKWTAPEAALYG---RFTIKSDVWSFGIL 370 (452)
T ss_dssp ----------CCGGGSCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred CceecccCCcccccccCHhHHhcC---CCCccccHHhHHHH
Confidence 443333344578899999987654 35778999999986
No 184
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.97 E-value=5.4e-30 Score=275.67 Aligned_cols=195 Identities=26% Similarity=0.392 Sum_probs=165.0
Q ss_pred ccHHHHHHHhcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHh--cCCCCcceEEeEE
Q 003982 571 ISIEVLRQVTDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTK--VRHRHLVALLGYC 648 (782)
Q Consensus 571 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~nI~~~~~~~ 648 (782)
.+......+.++|++.+.||+|+||.||+|.. +++.||||++... ..+.+.+|++++.. ++||||+++++++
T Consensus 32 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~ 105 (342)
T 1b6c_B 32 LPLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAAD 105 (342)
T ss_dssp SCHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEE
T ss_pred CceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeee
Confidence 44555667788999999999999999999987 6899999998643 34677889999887 7899999999999
Q ss_pred EeCC----eEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCCeEEcCCCCC
Q 003982 649 INGS----ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLH--------SLAQQSFIHRDLKPS 716 (782)
Q Consensus 649 ~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH--------~~~~~~ivHrDikp~ 716 (782)
.... ..++||||+++|+|.+++.+ ..+++.+++.++.|++.||+||| + .||+||||||+
T Consensus 106 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~ 176 (342)
T 1b6c_B 106 NKDNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSK 176 (342)
T ss_dssp ECCCSSCCCEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCB---CEEECSCCSGG
T ss_pred cccCCccceeEEEEeecCCCcHHHHHhc------cCccHHHHHHHHHHHHHHHHHHHHHHhhhccc---CCeeeCCCCHH
Confidence 8876 78999999999999999965 25899999999999999999999 6 89999999999
Q ss_pred CEEECCCCcEEEEeeccceecCCCCce---eeecccccccccCccccccchh---hhHHHHHHHHHhccc
Q 003982 717 NILIGDDMRAKVADFGLVKNAPDGKYS---VETRLAGTFGYLAPEYAGKHWM---ILCQMTGLIWLHGSV 780 (782)
Q Consensus 717 NIll~~~~~~kL~DfG~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~---~~~~~~~dvws~Gvv 780 (782)
||+++.++.+||+|||++......... ......||+.|+|||++.+... ..+..++||||+|++
T Consensus 177 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~i 246 (342)
T 1b6c_B 177 NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 246 (342)
T ss_dssp GEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHH
T ss_pred HEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHH
Confidence 999999999999999999876554322 1234579999999999876522 134578999999986
No 185
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.97 E-value=1.8e-30 Score=284.79 Aligned_cols=183 Identities=25% Similarity=0.363 Sum_probs=146.6
Q ss_pred hcCCCcc-ceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHh-cCCCCcceEEeEEEe----CC
Q 003982 580 TDNFSEA-NILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTK-VRHRHLVALLGYCIN----GS 652 (782)
Q Consensus 580 ~~~y~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~nI~~~~~~~~~----~~ 652 (782)
.++|.+. +.||+|+||.||+|.. .+++.||||+++.. ..+.+|++++.+ .+||||+++++++.. ..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~ 132 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 132 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCc
Confidence 3567776 7899999999999954 57899999998642 457788888754 579999999999876 56
Q ss_pred eEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECC---CCcEEEE
Q 003982 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD---DMRAKVA 729 (782)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~---~~~~kL~ 729 (782)
..|+||||+++|+|.+++... +...+++.++..++.|++.||+|||+ .||+||||||+|||++. ++.+||+
T Consensus 133 ~~~lv~E~~~gg~L~~~l~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~ 206 (400)
T 1nxk_A 133 CLLIVMECLDGGELFSRIQDR---GDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLT 206 (400)
T ss_dssp EEEEEEECCCSEEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEEC
T ss_pred EEEEEEEeCCCCcHHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEE
Confidence 789999999999999999752 22458999999999999999999999 89999999999999997 7899999
Q ss_pred eeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 730 DFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 730 DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|||+++...... .....+||+.|+|||++.+. .++.++||||+||+
T Consensus 207 DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~i 252 (400)
T 1nxk_A 207 DFGFAKETTSHN--SLTTPCYTPYYVAPEVLGPE---KYDKSCDMWSLGVI 252 (400)
T ss_dssp CCTTCEECC-------------CTTCCGGGSCCC---CSSSHHHHHHHHHH
T ss_pred ecccccccCCCC--ccccCCCCCCccCHhhcCCC---CCCCcccHHHHHHH
Confidence 999998765432 22345789999999998764 45678999999986
No 186
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=271.73 Aligned_cols=191 Identities=27% Similarity=0.472 Sum_probs=144.9
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCC-hhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLL 656 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l 656 (782)
..++|++.+.||+|+||.||+|.. .+++.||||++...... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 346799999999999999999965 57899999999754321 2245789999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeecccee
Q 003982 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (782)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~ 736 (782)
||||+++++|.+++... ..++++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++..
T Consensus 89 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 161 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNR----VKPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQ 161 (278)
T ss_dssp EEECCTTEEHHHHHHTC----SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEecCCCCcHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceee
Confidence 99999999999998652 2468999999999999999999999 8999999999999999999999999999987
Q ss_pred cCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 737 APDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 737 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
...... ......||+.|+|||++.+. ....++|+||+|++
T Consensus 162 ~~~~~~-~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 201 (278)
T 3cok_A 162 LKMPHE-KHYTLCGTPNYISPEIATRS---AHGLESDVWSLGCM 201 (278)
T ss_dssp CC--------------------------------CTHHHHHHHH
T ss_pred ccCCCC-cceeccCCCCcCCcchhcCC---CCCchhhHHHHHHH
Confidence 654321 12235689999999988764 45678999999986
No 187
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.97 E-value=1.7e-30 Score=285.20 Aligned_cols=193 Identities=25% Similarity=0.371 Sum_probs=162.0
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCC--eEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS--ERLL 656 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~--~~~l 656 (782)
.++|.+.+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|++++++++||||+++++++.+.. ..++
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l 86 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence 46799999999999999999965 4589999999975432 234677889999999999999999999998765 7799
Q ss_pred EEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEE----CCCCcEEEEeec
Q 003982 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI----GDDMRAKVADFG 732 (782)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll----~~~~~~kL~DfG 732 (782)
||||+++|+|.+++..... ...+++.+++.++.|++.||+|||+ .||+||||||+||++ +.++.+||+|||
T Consensus 87 v~e~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG 161 (396)
T 4eut_A 87 IMEFCPCGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (396)
T ss_dssp EECCCTTEEHHHHTTSGGG--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred EEecCCCCCHHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence 9999999999999976433 2348999999999999999999999 899999999999999 777889999999
Q ss_pred cceecCCCCceeeecccccccccCccccccc-----hhhhHHHHHHHHHhccc
Q 003982 733 LVKNAPDGKYSVETRLAGTFGYLAPEYAGKH-----WMILCQMTGLIWLHGSV 780 (782)
Q Consensus 733 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~~~~dvws~Gvv 780 (782)
+|+....... .....||+.|+|||++.+. ....++.++||||+||+
T Consensus 162 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~i 212 (396)
T 4eut_A 162 AARELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVT 212 (396)
T ss_dssp GCEECCCGGG--SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHH
T ss_pred CceEccCCCc--cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHH
Confidence 9987755332 2235699999999987541 11356889999999986
No 188
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.97 E-value=2.7e-30 Score=270.17 Aligned_cols=188 Identities=27% Similarity=0.451 Sum_probs=159.5
Q ss_pred hcCCCccceeecccceEEEEEEeC-CCcEEEEEEeccccCCh----hhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGN----KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER 654 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~ 654 (782)
.++|++.+.||+|+||.||+|... +++.||+|+++...... ...+.+.+|++++++++||||+++++++.+....
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 467999999999999999999654 68999999997654322 2467899999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCC----cEEEEe
Q 003982 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM----RAKVAD 730 (782)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~----~~kL~D 730 (782)
++||||+++++|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++ .+||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~d 155 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLID 155 (283)
T ss_dssp EEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECC
T ss_pred EEEEeecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEe
Confidence 9999999999999999752 358999999999999999999999 8999999999999998877 899999
Q ss_pred eccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 731 FGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 731 fG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
||.+........ .....||+.|+|||++.+. .++.++|+||+|++
T Consensus 156 fg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 200 (283)
T 3bhy_A 156 FGIAHKIEAGNE--FKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVI 200 (283)
T ss_dssp CTTCEECC----------CCCGGGCCHHHHTTC---CCCTHHHHHHHHHH
T ss_pred cccceeccCCCc--ccccCCCcCccCcceecCC---CCCcchhhhhHHHH
Confidence 999987654321 2334689999999988754 34678999999986
No 189
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.97 E-value=9.5e-31 Score=273.00 Aligned_cols=187 Identities=29% Similarity=0.518 Sum_probs=157.5
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCC-hhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
.++|++.+.||+|+||.||+|.. .+++.||||++...... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 46799999999999999999954 56779999999654321 22356789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
|||+++++|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++...
T Consensus 88 ~e~~~~~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp ECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 9999999999998763 358999999999999999999998 89999999999999999999999999998655
Q ss_pred CCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 738 PDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.... .....||+.|+|||++.+. .++.++||||+|++
T Consensus 160 ~~~~---~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 196 (279)
T 3fdn_A 160 PSSR---RTDLCGTLDYLPPEMIEGR---MHDEKVDLWSLGVL 196 (279)
T ss_dssp -----------CCCCTTCCHHHHTTC---CCCTTHHHHHHHHH
T ss_pred Cccc---ccccCCCCCccCHhHhccC---CCCccchhHhHHHH
Confidence 4322 2335789999999988765 34668899999986
No 190
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.97 E-value=1e-30 Score=304.65 Aligned_cols=190 Identities=25% Similarity=0.336 Sum_probs=163.1
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccC-ChhhHHHHHHHHHHHHhc-CCCCcceEEeEEEeCCeEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERL 655 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~ 655 (782)
..++|++.+.||+|+||.||+|+. .+++.||||++++... .....+.+..|.+++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 457899999999999999999955 5688999999976432 223456788899999987 6999999999999999999
Q ss_pred EEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccce
Q 003982 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (782)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~ 735 (782)
+||||+++|+|.+++... ..+++.++..++.||+.||+|||+ .||+||||||+|||++.++.+||+|||+|+
T Consensus 419 lV~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~ 490 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK 490 (674)
T ss_dssp EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCE
T ss_pred EEEeCcCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceee
Confidence 999999999999999763 358999999999999999999999 899999999999999999999999999998
Q ss_pred ecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 736 NAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 736 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
....... .....+||+.|+|||++.+. +++.++|+||+||+
T Consensus 491 ~~~~~~~-~~~~~~GT~~Y~APE~l~~~---~~~~~~DvwSlGvi 531 (674)
T 3pfq_A 491 ENIWDGV-TTKTFCGTPDYIAPEIIAYQ---PYGKSVDWWAFGVL 531 (674)
T ss_dssp ECCCTTC-CBCCCCSCSSSCCHHHHTCC---CBSTHHHHHHHHHH
T ss_pred ccccCCc-ccccccCCCcccCHhhhcCC---CCCccceEechHHH
Confidence 6543322 23446899999999998765 45788999999986
No 191
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.97 E-value=2.8e-30 Score=276.89 Aligned_cols=194 Identities=29% Similarity=0.504 Sum_probs=161.9
Q ss_pred hcCCCccceeecccceEEEEEEe--------CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhc-CCCCcceEEeEEEe
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL--------PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCIN 650 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~ 650 (782)
.++|++.+.||+|+||.||+|.. .++..||||+++... .....+.+.+|+++++++ +||||+++++++.+
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC-cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 46899999999999999999965 356789999997543 345667899999999999 89999999999999
Q ss_pred CCeEEEEEEccCCCCHHHHHHhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEE
Q 003982 651 GSERLLVYEYMPRGTLAQHLFEWHDH-----------GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719 (782)
Q Consensus 651 ~~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIl 719 (782)
.+..++||||+++|+|.+++...... ....+++.++..++.|++.||+|||+ .||+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceEE
Confidence 99999999999999999999764321 11348999999999999999999999 89999999999999
Q ss_pred ECCCCcEEEEeeccceecCCCCce-eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 720 IGDDMRAKVADFGLVKNAPDGKYS-VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 720 l~~~~~~kL~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
++.++.+||+|||+++........ ......+|+.|+|||++.+. .++.++||||+|++
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 248 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR---VYTHQSDVWSFGVL 248 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHC---EECHHHHHHHHHHH
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCC---CcChHHHHHHHHHH
Confidence 999999999999999877654322 22334578899999988654 35788999999986
No 192
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.97 E-value=2.7e-30 Score=280.21 Aligned_cols=199 Identities=29% Similarity=0.431 Sum_probs=167.0
Q ss_pred cHHHHHHHhcCCCccceeecccceEEEEEEeC-CCcEEEEEEeccccCC------hhhHHHHHHHHHHHHhc-CCCCcce
Q 003982 572 SIEVLRQVTDNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMG------NKGLSEFQAEIAVLTKV-RHRHLVA 643 (782)
Q Consensus 572 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l-~h~nI~~ 643 (782)
.......+.++|++.+.||+|+||.||+|... +|+.||||++...... ....+.+.+|+++++++ +||||++
T Consensus 85 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 164 (365)
T 2y7j_A 85 DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT 164 (365)
T ss_dssp HHHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCC
T ss_pred cchhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 34555667788999999999999999999764 7999999998765321 11245688999999999 7999999
Q ss_pred EEeEEEeCCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCC
Q 003982 644 LLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723 (782)
Q Consensus 644 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~ 723 (782)
+++++......++||||+++++|.+++... ..+++..+..++.|++.||.|||+ .||+||||||+||+++.+
T Consensus 165 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~ 236 (365)
T 2y7j_A 165 LIDSYESSSFMFLVFDLMRKGELFDYLTEK-----VALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDN 236 (365)
T ss_dssp EEEEEEBSSEEEEEECCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTT
T ss_pred EEEEEeeCCEEEEEEEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCC
Confidence 999999999999999999999999999752 358999999999999999999999 899999999999999999
Q ss_pred CcEEEEeeccceecCCCCceeeecccccccccCccccccch---hhhHHHHHHHHHhccc
Q 003982 724 MRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHW---MILCQMTGLIWLHGSV 780 (782)
Q Consensus 724 ~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~~~~dvws~Gvv 780 (782)
+.+||+|||++........ .....||+.|+|||++.+.. ..+++.++||||+||+
T Consensus 237 ~~ikl~DfG~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~i 294 (365)
T 2y7j_A 237 MQIRLSDFGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVI 294 (365)
T ss_dssp CCEEECCCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHH
T ss_pred CCEEEEecCcccccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHH
Confidence 9999999999987765332 23457999999999875321 1134668999999986
No 193
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.97 E-value=1.9e-30 Score=275.94 Aligned_cols=191 Identities=24% Similarity=0.355 Sum_probs=154.8
Q ss_pred hcCCCcc-ceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhc-CCCCcceEEeEEEeCCeEEE
Q 003982 580 TDNFSEA-NILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLL 656 (782)
Q Consensus 580 ~~~y~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~l 656 (782)
.+.|++. +.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++.++ +||||+++++++.+++..++
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~l 88 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYL 88 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 4678885 7899999999999964 578999999997653 34567899999999985 79999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCc---EEEEeecc
Q 003982 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR---AKVADFGL 733 (782)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~---~kL~DfG~ 733 (782)
||||+++++|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++. +||+|||+
T Consensus 89 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 160 (316)
T 2ac3_A 89 VFEKMRGGSILSHIHKR-----RHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDL 160 (316)
T ss_dssp EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTC
T ss_pred EEEcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccC
Confidence 99999999999999763 358999999999999999999999 89999999999999998765 99999999
Q ss_pred ceecCCCCc------eeeecccccccccCccccccch--hhhHHHHHHHHHhccc
Q 003982 734 VKNAPDGKY------SVETRLAGTFGYLAPEYAGKHW--MILCQMTGLIWLHGSV 780 (782)
Q Consensus 734 a~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~--~~~~~~~~dvws~Gvv 780 (782)
+........ ......+||+.|+|||++.+.. ...++.++||||+|++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~i 215 (316)
T 2ac3_A 161 GSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVI 215 (316)
T ss_dssp CC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHH
T ss_pred ccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHH
Confidence 876542211 1112346999999999886421 1235678999999986
No 194
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.97 E-value=9.7e-31 Score=274.38 Aligned_cols=185 Identities=22% Similarity=0.375 Sum_probs=158.5
Q ss_pred hcCCCccceeecccceEEEEEEeC-CC-------cEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeC
Q 003982 580 TDNFSEANILGRGGFGVVYGGELP-DG-------TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING 651 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~ 651 (782)
.++|.+.+.||+|+||.||+|... ++ ..||+|++.... ....+.+.+|++++++++||||+++++++.++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH--RNYSESFFEAASMMSKLSHKHLVLNYGVCVCG 84 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG--GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence 467899999999999999999543 33 479999997644 45567899999999999999999999999999
Q ss_pred CeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCc------
Q 003982 652 SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR------ 725 (782)
Q Consensus 652 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~------ 725 (782)
+..++||||+++++|.+++.... ..+++..+..++.|++.||+|||+ .||+||||||+||+++.++.
T Consensus 85 ~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~ 157 (289)
T 4fvq_A 85 DENILVQEFVKFGSLDTYLKKNK----NCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNP 157 (289)
T ss_dssp TCCEEEEECCTTCBHHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBC
T ss_pred CCCEEEEECCCCCCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCccccccc
Confidence 99999999999999999997632 248999999999999999999999 89999999999999998876
Q ss_pred --EEEEeeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 726 --AKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 726 --~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+||+|||++...... ....||+.|+|||++.+. ..++.++||||+|++
T Consensus 158 ~~~kl~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~i 207 (289)
T 4fvq_A 158 PFIKLSDPGISITVLPK-----DILQERIPWVPPECIENP--KNLNLATDKWSFGTT 207 (289)
T ss_dssp CEEEECCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCG--GGCCHHHHHHHHHHH
T ss_pred ceeeeccCcccccccCc-----cccCCcCcccCHHHhCCC--CCCCchhHHHHHHHH
Confidence 999999998655332 224578999999998763 245789999999986
No 195
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.97 E-value=3.5e-30 Score=268.18 Aligned_cols=191 Identities=24% Similarity=0.371 Sum_probs=162.9
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
+.++|++.+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC-TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc-hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence 457899999999999999999965 4789999999975442 34567899999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
|||+++++|.+++.. ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||.+...
T Consensus 84 ~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 155 (276)
T 2yex_A 84 LEYCSGGELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF 155 (276)
T ss_dssp EECCTTEEGGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEecCCCcHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCcccc
Confidence 999999999988754 3458999999999999999999999 89999999999999999999999999999866
Q ss_pred CCCCc-eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 738 PDGKY-SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 738 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..... .......||+.|+|||++.+.- ....++|+||+|++
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~~Di~slG~i 197 (276)
T 2yex_A 156 RYNNRERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIV 197 (276)
T ss_dssp EETTEECCBCCCCSCGGGCCGGGGTCSS--BCHHHHHHHHHHHH
T ss_pred CCCcchhcccCCccccCccChHHHhcCC--CCCCcchHHHHHHH
Confidence 43221 1223457899999999987641 13678999999986
No 196
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.97 E-value=2.9e-30 Score=275.92 Aligned_cols=188 Identities=29% Similarity=0.447 Sum_probs=161.1
Q ss_pred cCCCccceeecccceEEEEEEe-----CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEE--eCCe
Q 003982 581 DNFSEANILGRGGFGVVYGGEL-----PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCI--NGSE 653 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~--~~~~ 653 (782)
++|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++. +...
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 6789999999999999999973 468899999997653 455678999999999999999999999887 4566
Q ss_pred EEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeecc
Q 003982 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGL 733 (782)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~ 733 (782)
.++||||+++++|.+++.... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred EEEEEeecCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEccccc
Confidence 899999999999999997643 248999999999999999999999 8999999999999999999999999999
Q ss_pred ceecCCCCce--eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 734 VKNAPDGKYS--VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 734 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+......... ......||+.|+|||++.+. .++.++||||+|++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 219 (327)
T 3lxl_A 174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDN---IFSRQSDVWSFGVV 219 (327)
T ss_dssp CEECCTTCSEEECSSCCCSCGGGSCHHHHHHC---EEEHHHHHHHHHHH
T ss_pred ceecccCCccceeeccCCccccccCHHHhccC---CCChHHhHHHHHHH
Confidence 9877544322 22334688899999988664 35778999999986
No 197
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.97 E-value=1.1e-30 Score=279.09 Aligned_cols=197 Identities=26% Similarity=0.359 Sum_probs=164.0
Q ss_pred HHHHHHHhcCCCcc-ceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcC-CCCcceEEeEEE
Q 003982 573 IEVLRQVTDNFSEA-NILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGYCI 649 (782)
Q Consensus 573 ~~~l~~~~~~y~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nI~~~~~~~~ 649 (782)
++....+.++|.+. +.||+|+||.||+|.. .+++.||+|++............+.+|+.++++++ ||||+++++++.
T Consensus 20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~ 99 (327)
T 3lm5_A 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99 (327)
T ss_dssp SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence 33456677888887 8999999999999955 46899999999876655556788999999999995 699999999999
Q ss_pred eCCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECC---CCcE
Q 003982 650 NGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD---DMRA 726 (782)
Q Consensus 650 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~---~~~~ 726 (782)
+.+..++||||+++|+|.+++... ....+++.++..++.|++.||+|||+ .||+||||||+||+++. ++.+
T Consensus 100 ~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~~ 173 (327)
T 3lm5_A 100 NTSEIILILEYAAGGEIFSLCLPE---LAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDI 173 (327)
T ss_dssp CSSEEEEEEECCTTEEGGGGGSSC---C-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCCE
T ss_pred eCCeEEEEEEecCCCcHHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCcE
Confidence 999999999999999999987542 23468999999999999999999999 89999999999999997 7899
Q ss_pred EEEeeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 727 kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
||+|||+++....... .....||+.|+|||++.+. .++.++||||+|++
T Consensus 174 kL~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~i 222 (327)
T 3lm5_A 174 KIVDFGMSRKIGHACE--LREIMGTPEYLAPEILNYD---PITTATDMWNIGII 222 (327)
T ss_dssp EECCGGGCEEC-----------CCCGGGCCHHHHTTC---CCCTHHHHHHHHHH
T ss_pred EEeeCccccccCCccc--cccccCCcCccCCeeecCC---CCCchhhHHHHHHH
Confidence 9999999987754322 2335799999999998764 35678999999986
No 198
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=1.1e-31 Score=288.05 Aligned_cols=181 Identities=18% Similarity=0.204 Sum_probs=151.9
Q ss_pred hcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccC------ChhhHHHHHHHHHHHHhcC---------CCCcceE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTM------GNKGLSEFQAEIAVLTKVR---------HRHLVAL 644 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~---------h~nI~~~ 644 (782)
.++|++.+.||+|+||+||+|.. +++.||||++..... .....+.+.+|++++++++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 45788999999999999999987 789999999986542 2334578999999999886 8888877
Q ss_pred EeEEE------------------------------eCCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q 003982 645 LGYCI------------------------------NGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVA 694 (782)
Q Consensus 645 ~~~~~------------------------------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~ 694 (782)
.+++. +.+..|+||||+++|++.+.+.+ ..+++.++..++.|++
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLT 171 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHH
Confidence 77643 26789999999999987666632 3579999999999999
Q ss_pred HHHHHHh-hcCCCCeEEcCCCCCCEEECCCC--------------------cEEEEeeccceecCCCCceeeeccccccc
Q 003982 695 RGVEYLH-SLAQQSFIHRDLKPSNILIGDDM--------------------RAKVADFGLVKNAPDGKYSVETRLAGTFG 753 (782)
Q Consensus 695 ~aL~~LH-~~~~~~ivHrDikp~NIll~~~~--------------------~~kL~DfG~a~~~~~~~~~~~~~~~gt~~ 753 (782)
.||+||| + .||+||||||+|||++.++ .+||+|||+|+..... ..+||+.
T Consensus 172 ~aL~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~ 242 (336)
T 2vuw_A 172 ASLAVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDV 242 (336)
T ss_dssp HHHHHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCC
T ss_pred HHHHHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeec
Confidence 9999999 8 8999999999999999887 8999999999876542 2379999
Q ss_pred ccCccccccchhhhHHHHHHHHHhccc
Q 003982 754 YLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 754 y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|+|||++.+.. +.++||||++..
T Consensus 243 y~aPE~~~g~~----~~~~Diwsl~~~ 265 (336)
T 2vuw_A 243 SMDEDLFTGDG----DYQFDIYRLMKK 265 (336)
T ss_dssp TTCSGGGCCCS----SHHHHHHHHHHH
T ss_pred ccChhhhcCCC----ccceehhhhhCC
Confidence 99999998863 678999998654
No 199
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.97 E-value=3e-30 Score=287.82 Aligned_cols=183 Identities=32% Similarity=0.516 Sum_probs=156.8
Q ss_pred hcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCC-eEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS-ERLLVY 658 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~-~~~lv~ 658 (782)
.++|++.+.||+|+||.||+|.. .++.||||+++... ..+.|.+|++++++++||||+++++++.+.. ..++||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 46788999999999999999987 47899999997643 4478999999999999999999999987765 789999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecC
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~ 738 (782)
||+++|+|.+++.... ...+++..+..++.|++.||+|||+ +||+||||||+|||++.++.+||+|||+++...
T Consensus 267 e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp ECCTTCBHHHHHHHHC---TTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EecCCCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 9999999999997642 2347899999999999999999999 899999999999999999999999999998654
Q ss_pred CCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 739 DGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
... ....+++.|+|||++.+. .++.++||||+||+
T Consensus 341 ~~~----~~~~~~~~y~aPE~~~~~---~~~~~sDvwslG~~ 375 (450)
T 1k9a_A 341 STQ----DTGKLPVKWTAPEALREK---KFSTKSDVWSFGIL 375 (450)
T ss_dssp ----------CCCTTTSCHHHHHSS---CCCHHHHHHHHHHH
T ss_pred ccc----cCCCCCcceeCHHHhcCC---CCCcHHHHHHHHHH
Confidence 322 123578899999998764 45789999999986
No 200
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.97 E-value=4.7e-30 Score=273.10 Aligned_cols=185 Identities=30% Similarity=0.507 Sum_probs=156.9
Q ss_pred CCccceeecccceEEEEEEe-----CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeC--CeEE
Q 003982 583 FSEANILGRGGFGVVYGGEL-----PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING--SERL 655 (782)
Q Consensus 583 y~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~--~~~~ 655 (782)
|++.+.||+|+||.||++.. .+++.||||++.... .....+.+.+|++++++++||||+++++++.+. ...+
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA-GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc-ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 38899999999999988854 368899999997653 345567899999999999999999999999884 6789
Q ss_pred EEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccce
Q 003982 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (782)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~ 735 (782)
+||||+++++|.+++.. ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++.
T Consensus 112 lv~e~~~~~~L~~~l~~------~~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 182 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLPR------HSIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAK 182 (318)
T ss_dssp EEECCCTTCBHHHHGGG------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred EEEecccCCcHHHHHhh------CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCccccc
Confidence 99999999999999865 248999999999999999999999 899999999999999999999999999998
Q ss_pred ecCCCCce--eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 736 NAPDGKYS--VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 736 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
........ ......||+.|+|||++.+. .++.++||||+|++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 226 (318)
T 3lxp_A 183 AVPEGHEYYRVREDGDSPVFWYAPECLKEY---KFYYASDVWSFGVT 226 (318)
T ss_dssp ECCTTCSEEEC---CCCCGGGCCHHHHHHC---EEEHHHHHHHHHHH
T ss_pred cccccccccccccCCCCCceeeChHHhcCC---CCCcHHHHHHHHHH
Confidence 87654321 22334678899999988764 34678999999986
No 201
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.97 E-value=4.6e-30 Score=269.44 Aligned_cols=185 Identities=24% Similarity=0.345 Sum_probs=159.4
Q ss_pred cCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEe----CCeEE
Q 003982 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN----GSERL 655 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~----~~~~~ 655 (782)
+.|++.+.||+|+||.||+|.. .++..||+|++..........+.+.+|++++++++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 3477889999999999999954 568899999998776666677889999999999999999999999875 35689
Q ss_pred EEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eEEcCCCCCCEEEC-CCCcEEEEeec
Q 003982 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQS--FIHRDLKPSNILIG-DDMRAKVADFG 732 (782)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~--ivHrDikp~NIll~-~~~~~kL~DfG 732 (782)
+||||+++++|.+++... ..+++..+..++.|++.||+|||+ .| |+||||||+||+++ .++.+||+|||
T Consensus 106 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg 177 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLG 177 (290)
T ss_dssp EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTT
T ss_pred EEEEecCCCCHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCC
Confidence 999999999999999763 458999999999999999999998 77 99999999999998 78999999999
Q ss_pred cceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 733 LVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 733 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
++........ ....||+.|+|||++.+. ++.++||||+|++
T Consensus 178 ~~~~~~~~~~---~~~~~t~~y~aPE~~~~~----~~~~~Di~slG~~ 218 (290)
T 1t4h_A 178 LATLKRASFA---KAVIGTPEFMAPEMYEEK----YDESVDVYAFGMC 218 (290)
T ss_dssp GGGGCCTTSB---EESCSSCCCCCGGGGGTC----CCTHHHHHHHHHH
T ss_pred Cccccccccc---ccccCCcCcCCHHHHhcc----CCCcchHHHHHHH
Confidence 9976544322 235689999999988765 4568999999986
No 202
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.97 E-value=1.6e-30 Score=276.02 Aligned_cols=194 Identities=27% Similarity=0.428 Sum_probs=163.4
Q ss_pred hcCCCccceeecccceEEEEEEe------CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhc-CCCCcceEEeEEEeCC
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL------PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGS 652 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~ 652 (782)
.++|++.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+++++++ +||||+++++++.+++
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch-hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 46789999999999999999964 356789999997543 234567899999999999 8999999999999999
Q ss_pred eEEEEEEccCCCCHHHHHHhhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEE
Q 003982 653 ERLLVYEYMPRGTLAQHLFEWHDH-------------GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNIL 719 (782)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~-------------~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIl 719 (782)
..++||||+++|+|.+++...... ....+++.++..++.|++.||+|||+ .||+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEE
Confidence 999999999999999999764321 12358999999999999999999999 89999999999999
Q ss_pred ECCCCcEEEEeeccceecCCCCc-eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 720 IGDDMRAKVADFGLVKNAPDGKY-SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 720 l~~~~~~kL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
++.++.+||+|||+++....... .......||+.|+|||++.+. .++.++||||+|++
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 236 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNC---VYTFESDVWSYGIF 236 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCC---CCChHHHHHHHHHH
Confidence 99999999999999987755432 222334578899999987654 45788999999986
No 203
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=1.6e-30 Score=279.97 Aligned_cols=194 Identities=26% Similarity=0.470 Sum_probs=159.4
Q ss_pred hcCCCccceeecccceEEEEEEe------CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhc-CCCCcceEEeEEEeCC
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL------PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGS 652 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~ 652 (782)
.++|++.+.||+|+||.||+|.. .++..||||++.... .....+.+.+|+++++++ +||||+++++++.+.+
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 47899999999999999999964 245689999997543 233457899999999999 8999999999999999
Q ss_pred eEEEEEEccCCCCHHHHHHhhccC------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCC
Q 003982 653 ERLLVYEYMPRGTLAQHLFEWHDH------------------GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLK 714 (782)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~------------------~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik 714 (782)
..++||||+++|+|.+++...... ....+++.++..++.|++.||+|||+ .||+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCC
Confidence 999999999999999999764321 01347999999999999999999999 899999999
Q ss_pred CCCEEECCCCcEEEEeeccceecCCCC-ceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 715 PSNILIGDDMRAKVADFGLVKNAPDGK-YSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 715 p~NIll~~~~~~kL~DfG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|+||+++.++.+||+|||++....... ........||+.|+|||++.+. .++.++||||+|++
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~i 263 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEG---IYTIKSDVWSYGIL 263 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccC---CCChhHhHHHHHHH
Confidence 999999999999999999998664433 2223345678899999987654 35778999999986
No 204
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.97 E-value=1.4e-30 Score=271.72 Aligned_cols=193 Identities=21% Similarity=0.372 Sum_probs=162.3
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEe--CCeEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN--GSERLL 656 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~--~~~~~l 656 (782)
.++|++.+.||+|+||.||+|.. .+++.||+|++..........+.+.+|++++++++||||+++++++.+ ....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 46899999999999999999965 478999999998766556667889999999999999999999998854 568899
Q ss_pred EEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC-----eEEcCCCCCCEEECCCCcEEEEee
Q 003982 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQS-----FIHRDLKPSNILIGDDMRAKVADF 731 (782)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~-----ivHrDikp~NIll~~~~~~kL~Df 731 (782)
||||+++++|.+++...... ...+++.+++.++.|++.||+|||+ .| |+||||||+||+++.++.+||+||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~df 160 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKE-RQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCC
T ss_pred EEeCCCCCCHHHHHHhhccc-CCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence 99999999999999775433 3458999999999999999999998 67 999999999999999999999999
Q ss_pred ccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 732 GLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 732 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|.+........ ......||+.|+|||++.+. .++.++||||+|++
T Consensus 161 g~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 205 (279)
T 2w5a_A 161 GLARILNHDTS-FAKTFVGTPYYMSPEQMNRM---SYNEKSDIWSLGCL 205 (279)
T ss_dssp CHHHHC---CH-HHHHHHSCCTTCCHHHHHCC----CCHHHHHHHHHHH
T ss_pred chheeeccccc-cccccCCCccccChHHhccC---CCCchhhHHHHHHH
Confidence 99987654321 12234689999999988764 45678999999986
No 205
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.97 E-value=1.3e-30 Score=294.26 Aligned_cols=188 Identities=25% Similarity=0.418 Sum_probs=163.2
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCC-hhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLL 656 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l 656 (782)
+.++|++.+.||+|+||.||+|.. .+++.||||++...... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 456799999999999999999965 47899999999765432 3456789999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEE---CCCCcEEEEeecc
Q 003982 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI---GDDMRAKVADFGL 733 (782)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll---~~~~~~kL~DfG~ 733 (782)
||||+++|+|.+++.. ...+++.++..++.|++.||+|||+ .||+||||||+||++ +.++.+||+|||+
T Consensus 104 v~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~ 175 (484)
T 3nyv_A 104 VGEVYTGGELFDEIIS-----RKRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGL 175 (484)
T ss_dssp EECCCCSCBHHHHHHT-----CSCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTH
T ss_pred EEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeee
Confidence 9999999999998865 3458999999999999999999999 899999999999999 4678999999999
Q ss_pred ceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 734 VKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 734 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|+....... ....+||+.|+|||++.+. ++.++||||+||+
T Consensus 176 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~----~~~~~DiwslG~i 216 (484)
T 3nyv_A 176 STHFEASKK--MKDKIGTAYYIAPEVLHGT----YDEKCDVWSTGVI 216 (484)
T ss_dssp HHHBCCCCS--HHHHTTGGGTCCHHHHHTC----CCTHHHHHHHHHH
T ss_pred eEEcccccc--cccCCCCccccCceeecCC----CCCcceeHHHHHH
Confidence 987755332 2335799999999998775 4568999999986
No 206
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=1.3e-30 Score=284.92 Aligned_cols=189 Identities=23% Similarity=0.362 Sum_probs=154.3
Q ss_pred HHHhcCCCccceeecccceEEEEEE-eCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeC----
Q 003982 577 RQVTDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING---- 651 (782)
Q Consensus 577 ~~~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~---- 651 (782)
....++|++.+.||+|+||+||+|. ..+++.||||++.... ....+|+++++.++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP------RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT------TSCCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHHcCCCCccchhheeeecCccc
Confidence 3456789999999999999999995 4679999999987543 2234799999999999999999998543
Q ss_pred ----------------------------------CeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHH
Q 003982 652 ----------------------------------SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGV 697 (782)
Q Consensus 652 ----------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL 697 (782)
...++||||++ ++|.+.+...... ...+++..+..++.|+++||
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~~aL 154 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRS-GRSIPMNLISIYIYQLFRAV 154 (383)
T ss_dssp ---------------------------------CCEEEEEECCCS-EEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHH
Confidence 34789999997 5888888765443 35689999999999999999
Q ss_pred HHHhhcCCCCeEEcCCCCCCEEEC-CCCcEEEEeeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHH
Q 003982 698 EYLHSLAQQSFIHRDLKPSNILIG-DDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWL 776 (782)
Q Consensus 698 ~~LH~~~~~~ivHrDikp~NIll~-~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws 776 (782)
+|||+ .||+||||||+||+++ .++.+||+|||+|+....... .....||+.|+|||++.+. ..++.++||||
T Consensus 155 ~~LH~---~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~--~~~~~~~Diws 227 (383)
T 3eb0_A 155 GFIHS---LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGA--TEYTPSIDLWS 227 (383)
T ss_dssp HHHHT---TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTC--SSCCTHHHHHH
T ss_pred HHHHH---CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCC--CCCCcchhhhh
Confidence 99998 8999999999999997 688999999999987754332 2334689999999987653 22567899999
Q ss_pred hccc
Q 003982 777 HGSV 780 (782)
Q Consensus 777 ~Gvv 780 (782)
+|++
T Consensus 228 lG~i 231 (383)
T 3eb0_A 228 IGCV 231 (383)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9986
No 207
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.97 E-value=4.7e-30 Score=272.14 Aligned_cols=193 Identities=24% Similarity=0.391 Sum_probs=153.9
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccC-ChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
.++|++.+.||+|+||.||+|.. .+++.||||++..... .......+.+|++++++++||||+++++++.+.+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 45799999999999999999964 5789999999976432 344567899999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
|||+++++|.+++...... ...+++.++..++.|++.||.|||+ .||+||||||+||+++.++.+||+|||++...
T Consensus 111 ~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQ-KRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EECCCSCBHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EecCCCCCHHHHHHHhccc-ccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 9999999999999765433 3568999999999999999999999 89999999999999999999999999999876
Q ss_pred CCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 738 PDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..... ......|++.|+|||++.+. .++.++||||+|++
T Consensus 187 ~~~~~-~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~i 225 (310)
T 2wqm_A 187 SSKTT-AAHSLVGTPYYMSPERIHEN---GYNFKSDIWSLGCL 225 (310)
T ss_dssp -------------CCSSCCHHHHTTC---CCCHHHHHHHHHHH
T ss_pred cCCCc-cccccCCCeeEeChHHhCCC---CCCchhhHHHHHHH
Confidence 54322 22334689999999988764 45778999999986
No 208
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.97 E-value=2.1e-30 Score=270.96 Aligned_cols=186 Identities=29% Similarity=0.495 Sum_probs=159.3
Q ss_pred HHhcCCCccceeecccceEEEEEEeC-CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEe------
Q 003982 578 QVTDNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN------ 650 (782)
Q Consensus 578 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~------ 650 (782)
.+..+|++.+.||+|+||.||+|... +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (284)
T 2a19_B 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPE 81 (284)
T ss_dssp HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--
T ss_pred hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcc
Confidence 35678999999999999999999664 78999999997643 357789999999999999999998864
Q ss_pred ----------CCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEE
Q 003982 651 ----------GSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720 (782)
Q Consensus 651 ----------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll 720 (782)
....++||||+++++|.+++..... ..+++..+..++.|++.||.|||+ .||+||||||+||++
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~ 155 (284)
T 2a19_B 82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG---EKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFL 155 (284)
T ss_dssp -------CCEEEEEEEEECCCCSCBHHHHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEE
T ss_pred cccccccccCcceEEEEEeccCCCCHHHHHhhccC---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEE
Confidence 3457999999999999999976432 358999999999999999999999 899999999999999
Q ss_pred CCCCcEEEEeeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 721 GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 721 ~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
++++.+||+|||++........ .....||+.|+|||++.+. .++.++|+||+|++
T Consensus 156 ~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 210 (284)
T 2a19_B 156 VDTKQVKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQ---DYGKEVDLYALGLI 210 (284)
T ss_dssp EETTEEEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCS---CCCTHHHHHHHHHH
T ss_pred cCCCCEEECcchhheecccccc--ccccCCcccccChhhhccC---CCcchhhhHHHHHH
Confidence 9999999999999987765432 2334689999999988764 35678999999986
No 209
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.97 E-value=3.9e-30 Score=271.02 Aligned_cols=186 Identities=22% Similarity=0.282 Sum_probs=159.4
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhc-CCCCcceEEeEEEeCCeEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~lv 657 (782)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+++++++ +|++|+++++++.+....++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 84 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV 84 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence 46799999999999999999964 678999999986543 234578899999999 799999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCc-----EEEEeec
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR-----AKVADFG 732 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~-----~kL~DfG 732 (782)
|||+ +++|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++. +||+|||
T Consensus 85 ~e~~-~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg 156 (298)
T 1csn_A 85 IDLL-GPSLEDLLDLC----GRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG 156 (298)
T ss_dssp EECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred EEec-CCCHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECc
Confidence 9999 99999999763 2358999999999999999999998 89999999999999987776 9999999
Q ss_pred cceecCCCCce------eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 733 LVKNAPDGKYS------VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 733 ~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+++........ ......||+.|+|||++.+. .++.++||||+|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~i 207 (298)
T 1csn_A 157 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGR---EQSRRDDLEALGHV 207 (298)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTC---CCCHHHHHHHHHHH
T ss_pred cccccccccccccccccCccCCCCCcccCCchhhcCC---CCChHHHHHHHHHH
Confidence 99876543321 22345799999999998765 35789999999986
No 210
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.97 E-value=1.8e-30 Score=272.45 Aligned_cols=194 Identities=27% Similarity=0.334 Sum_probs=148.7
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 658 (782)
.++|++.+.||+|+||.||+|.. .+++.||||++..........+.+.++...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 46899999999999999999965 67899999999765433334444556666688889999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQ-SFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~-~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
||++ |+|.+++...... ...+++.++..++.|++.||+|||+ . ||+||||||+||+++.++.+||+|||++...
T Consensus 86 e~~~-~~l~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDK-GQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp ECCS-EEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred ehhc-cchHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 9996 5898888764433 3568999999999999999999998 6 9999999999999999999999999999876
Q ss_pred CCCCceeeecccccccccCccccccc-hhhhHHHHHHHHHhccc
Q 003982 738 PDGKYSVETRLAGTFGYLAPEYAGKH-WMILCQMTGLIWLHGSV 780 (782)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~~dvws~Gvv 780 (782)
..... .....||+.|+|||++... ....++.++||||+|++
T Consensus 161 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~i 202 (290)
T 3fme_A 161 VDDVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGIT 202 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHH
T ss_pred ccccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHH
Confidence 54332 2234689999999996321 12346788999999986
No 211
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.97 E-value=1.6e-30 Score=272.84 Aligned_cols=191 Identities=29% Similarity=0.491 Sum_probs=149.4
Q ss_pred hcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 659 (782)
.++|++.+.||+|+||.||+|... ..||||+++.........+.+.+|++++++++||||++++++. .....++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 467999999999999999999763 3699999987665566778899999999999999999999965 5567899999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecCC
Q 003982 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (782)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~~ 739 (782)
|+++++|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++.....
T Consensus 100 ~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 100 WCEGSSLYHHLHAS----ETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp CCCEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred ecCCCcHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceecccccc
Confidence 99999999998542 3458999999999999999999999 8999999999999999999999999999976543
Q ss_pred CC-ceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 740 GK-YSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 740 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.. ........||+.|+|||++...-...++.++||||+|++
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~i 214 (289)
T 3og7_A 173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIV 214 (289)
T ss_dssp -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHH
T ss_pred ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHH
Confidence 22 112234568999999998863212245678999999986
No 212
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.96 E-value=4e-30 Score=267.76 Aligned_cols=189 Identities=29% Similarity=0.461 Sum_probs=155.3
Q ss_pred hcCCCccceeecccceEEEEEEeC-CCcEEEEEEeccccCC-hhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
.++|++.+.||+|+||.||+|... +++.||||++...... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 468999999999999999999654 7899999999754321 23456889999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
|||+++++|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++...
T Consensus 90 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~ 161 (276)
T 2h6d_A 90 MEYVSGGELFDYICKH-----GRVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMM 161 (276)
T ss_dssp EECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred EeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeeccccccc
Confidence 9999999999999763 358999999999999999999999 89999999999999999999999999999876
Q ss_pred CCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 738 PDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..... .....||+.|+|||++.+.. ..+.++|+||+|++
T Consensus 162 ~~~~~--~~~~~~~~~y~aPE~~~~~~--~~~~~~Di~slG~~ 200 (276)
T 2h6d_A 162 SDGEF--LRTSCGSPNYAAPEVISGRL--YAGPEVDIWSCGVI 200 (276)
T ss_dssp CC---------------CCTGGGTTSC--CCHHHHHHHHHHHH
T ss_pred CCCcc--eecccCCccccCHHHHcCCC--CCCccchHHHHHHH
Confidence 54332 22346899999999987651 23678999999986
No 213
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.96 E-value=1.3e-30 Score=278.53 Aligned_cols=189 Identities=27% Similarity=0.469 Sum_probs=151.1
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcE----EEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTK----IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER 654 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~ 654 (782)
.++|++.+.||+|+||.||+|.. .+++. ||+|.+.... .....+++.+|++++++++||||+++++++.++. .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~ 91 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-E
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-e
Confidence 35789999999999999999964 34443 5888775432 2345678999999999999999999999998754 7
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccc
Q 003982 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV 734 (782)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a 734 (782)
++|+||+++|+|.+++... ...+++.+++.++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+|
T Consensus 92 ~~v~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 164 (327)
T 3poz_A 92 QLITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLA 164 (327)
T ss_dssp EEEEECCTTCBHHHHHHHS----TTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHH
T ss_pred EEEEEecCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCcce
Confidence 8999999999999999763 2458999999999999999999999 89999999999999999999999999999
Q ss_pred eecCCCCce-eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 735 KNAPDGKYS-VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 735 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+........ ......||+.|+|||++.+. .++.++||||+||+
T Consensus 165 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~i 208 (327)
T 3poz_A 165 KLLGAEEKEYHAEGGKVPIKWMALESILHR---IYTHQSDVWSYGVT 208 (327)
T ss_dssp HHHTTTCC-------CCCGGGSCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred eEccCCcccccccCCCccccccChHHhccC---CCCchhhhhhhHHH
Confidence 876543321 22334578899999988764 45789999999986
No 214
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.96 E-value=2.4e-30 Score=281.49 Aligned_cols=185 Identities=25% Similarity=0.355 Sum_probs=149.8
Q ss_pred hcCCCccceeecccceEEEEEE-eCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCC------
Q 003982 580 TDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS------ 652 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~------ 652 (782)
.++|++.+.||+|+||.||+|. ..+++.||||++..........+.+.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 4789999999999999999995 457899999999865544556678999999999999999999999997665
Q ss_pred eEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeec
Q 003982 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG 732 (782)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG 732 (782)
..++||||++ ++|.+.+.. .+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||
T Consensus 104 ~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 172 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFG 172 (371)
T ss_dssp EEEEEEECCS-EEHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ceEEEEEcCC-CCHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEee
Confidence 7899999996 578887742 48899999999999999999999 899999999999999999999999999
Q ss_pred cceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 733 LVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 733 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+|+...... ......||+.|+|||++.+. .++.++||||+||+
T Consensus 173 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~i 215 (371)
T 2xrw_A 173 LARTAGTSF--MMTPYVVTRYYRAPEVILGM---GYKENVDIWSVGCI 215 (371)
T ss_dssp C------------------CTTCCHHHHTTC---CCCTTHHHHHHHHH
T ss_pred ccccccccc--ccCCceecCCccCHHHhcCC---CCCchHhHHHHHHH
Confidence 998765422 22345789999999998764 45678999999986
No 215
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.96 E-value=6.8e-30 Score=269.95 Aligned_cols=187 Identities=27% Similarity=0.467 Sum_probs=162.6
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 658 (782)
.+.|++.+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|+.++++++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 99 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 99 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC-STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 35689999999999999999954 5789999999976542 345688999999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecC
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~ 738 (782)
||+++++|.+++.. ..+++.++..++.|++.||.|||+ .||+||||||+||+++.++.+||+|||++....
T Consensus 100 e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 170 (303)
T 3a7i_A 100 EYLGGGSALDLLEP------GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 170 (303)
T ss_dssp ECCTTEEHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECB
T ss_pred EeCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecC
Confidence 99999999998853 458999999999999999999999 899999999999999999999999999998765
Q ss_pred CCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 739 DGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.... ......||+.|+|||++.+. .++.++|+||+|++
T Consensus 171 ~~~~-~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 208 (303)
T 3a7i_A 171 DTQI-KRNTFVGTPFWMAPEVIKQS---AYDSKADIWSLGIT 208 (303)
T ss_dssp TTBC-CBCCCCSCGGGCCHHHHTTC---CBCTHHHHHHHHHH
T ss_pred cccc-ccCccCCCcCccCHHHHhcC---CCCchhhhHHHHHH
Confidence 4332 22345789999999998764 34668999999986
No 216
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=1.8e-30 Score=279.81 Aligned_cols=192 Identities=26% Similarity=0.355 Sum_probs=153.1
Q ss_pred HHhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCCh---hhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCe
Q 003982 578 QVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGN---KGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE 653 (782)
Q Consensus 578 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~ 653 (782)
...++|++.+.||+|+||.||+|.. .+++.||||++....... ...+.+.+|++++++++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 3457899999999999999999965 468999999997543221 123468899999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeecc
Q 003982 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGL 733 (782)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~ 733 (782)
.++||||+++ +|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDN----SLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGL 158 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTC----CSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGG
T ss_pred eEEEEEcCCC-CHHHHHHhc----CcCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEeccc
Confidence 9999999975 888887542 3458889999999999999999999 8999999999999999999999999999
Q ss_pred ceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 734 VKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 734 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
++....... ......||+.|+|||++.+. ..++.++||||+|++
T Consensus 159 a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~i 202 (346)
T 1ua2_A 159 AKSFGSPNR-AYTHQVVTRWYRAPELLFGA--RMYGVGVDMWAVGCI 202 (346)
T ss_dssp GSTTTSCCC-CCCCSCCCCTTCCHHHHTTC--SCCCHHHHHHHHHHH
T ss_pred ceeccCCcc-cCCcccccccccCchHhhCC--CCCCchhhhHhHHHH
Confidence 987654322 22345789999999988653 134678999999986
No 217
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.96 E-value=2.1e-30 Score=275.74 Aligned_cols=195 Identities=29% Similarity=0.400 Sum_probs=160.2
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEe----CCeE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN----GSER 654 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~----~~~~ 654 (782)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+++++.++||||+++++++.. ....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE--QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS--HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC--HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 46899999999999999999965 678999999986643 4566789999999999999999999999873 3477
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccc
Q 003982 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV 734 (782)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a 734 (782)
++||||+++|+|.+++...... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||.+
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKDK-GNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred EEEEEeCCCCcHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 9999999999999999875443 3568999999999999999999999 89999999999999999999999999998
Q ss_pred eecCCCCce--------eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 735 KNAPDGKYS--------VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 735 ~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
......... ......||+.|+|||++.+.....++.++||||+|++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~i 235 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCV 235 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHH
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHH
Confidence 765421100 0112357999999999875422234678999999986
No 218
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.96 E-value=3.4e-30 Score=272.42 Aligned_cols=186 Identities=29% Similarity=0.453 Sum_probs=158.7
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
+.++|.+.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP--AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc--ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 456899999999999999999965 478999999997643 22346788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEE---CCCCcEEEEeeccc
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI---GDDMRAKVADFGLV 734 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll---~~~~~~kL~DfG~a 734 (782)
|||+++++|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||++ +.++.+||+|||++
T Consensus 85 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~ 156 (304)
T 2jam_A 85 MQLVSGGELFDRILER-----GVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLS 156 (304)
T ss_dssp ECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTT
T ss_pred EEcCCCccHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcc
Confidence 9999999999998763 358999999999999999999999 899999999999999 77889999999998
Q ss_pred eecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 735 KNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 735 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
....... .....||+.|+|||++.+. .++.++||||+|++
T Consensus 157 ~~~~~~~---~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 196 (304)
T 2jam_A 157 KMEQNGI---MSTACGTPGYVAPEVLAQK---PYSKAVDCWSIGVI 196 (304)
T ss_dssp CCCCCBT---THHHHSCCCBCCTTTBSSC---SCCHHHHHHHHHHH
T ss_pred eecCCCc---cccccCCCCccChHHhccC---CCCchhhHHHHHHH
Confidence 7654322 1234689999999998765 45789999999986
No 219
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.96 E-value=3.5e-30 Score=276.40 Aligned_cols=186 Identities=28% Similarity=0.458 Sum_probs=150.0
Q ss_pred hcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHH--HHhcCCCCcceEEeEEEe-----CC
Q 003982 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAV--LTKVRHRHLVALLGYCIN-----GS 652 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~--l~~l~h~nI~~~~~~~~~-----~~ 652 (782)
.++|++.+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++.. ..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN-----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc-----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 46899999999999999999977 78999999996532 3444445444 445899999999986543 23
Q ss_pred eEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC---------CeEEcCCCCCCEEECCC
Q 003982 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQ---------SFIHRDLKPSNILIGDD 723 (782)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~---------~ivHrDikp~NIll~~~ 723 (782)
..++||||+++|+|.+++.. ...++..+..++.|++.||+|||+ . ||+||||||+||+++.+
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~~L~~LH~---~~~~~~~~~~~ivH~Dikp~Nill~~~ 156 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSL------HTSDWVSSCRLAHSVTRGLAYLHT---ELPRGDHYKPAISHRDLNSRNVLVKND 156 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHC---CBCCGGGCBCCEECSSCSGGGEEECTT
T ss_pred eEEEEEecCCCCcHHHHHhh------cccchhHHHHHHHHHHHHHHHHHh---hhccccccccceeecccccceEEEcCC
Confidence 56899999999999999965 235889999999999999999998 6 99999999999999999
Q ss_pred CcEEEEeeccceecCCCCc-------eeeecccccccccCccccccch----hhhHHHHHHHHHhccc
Q 003982 724 MRAKVADFGLVKNAPDGKY-------SVETRLAGTFGYLAPEYAGKHW----MILCQMTGLIWLHGSV 780 (782)
Q Consensus 724 ~~~kL~DfG~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~----~~~~~~~~dvws~Gvv 780 (782)
+.+||+|||+++....... .......||+.|+|||++.+.. ...++.++||||+|++
T Consensus 157 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~i 224 (336)
T 3g2f_A 157 GTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLI 224 (336)
T ss_dssp SCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHH
T ss_pred CcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHH
Confidence 9999999999987654321 1122346999999999987631 1356788999999986
No 220
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.96 E-value=5.2e-30 Score=268.60 Aligned_cols=186 Identities=30% Similarity=0.567 Sum_probs=155.2
Q ss_pred cCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhh-----HHHHHHHHHHHHhcCCCCcceEEeEEEeCCeE
Q 003982 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKG-----LSEFQAEIAVLTKVRHRHLVALLGYCINGSER 654 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~-----~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~ 654 (782)
++|++.+.||+|+||.||+|.. .+++.||+|++......... .+.+.+|++++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 6789999999999999999965 57899999999765432221 267899999999999999999999986655
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eEEcCCCCCCEEECCCCc-----EE
Q 003982 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQS--FIHRDLKPSNILIGDDMR-----AK 727 (782)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~--ivHrDikp~NIll~~~~~-----~k 727 (782)
++||||+++|+|.+++.+. ...+++..+..++.|++.||+|||+ .| |+||||||+||+++.++. +|
T Consensus 97 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~k 169 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDK----AHPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCAK 169 (287)
T ss_dssp EEEEECCTTCBHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCEE
T ss_pred eEEEEecCCCCHHHHHhcc----cCCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeEE
Confidence 6999999999999988652 3468999999999999999999998 78 999999999999988776 99
Q ss_pred EEeeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 728 VADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 728 L~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|+|||+++..... .....||+.|+|||++.+. ...++.++||||+|++
T Consensus 170 l~Dfg~~~~~~~~----~~~~~g~~~y~aPE~~~~~-~~~~~~~~Di~slG~~ 217 (287)
T 4f0f_A 170 VADFGLSQQSVHS----VSGLLGNFQWMAPETIGAE-EESYTEKADTYSFAMI 217 (287)
T ss_dssp ECCCTTCBCCSSC----EECCCCCCTTSCGGGSSCS-SCEECHHHHHHHHHHH
T ss_pred eCCCCcccccccc----ccccCCCccccCchhhccC-CCCcCchhhHHHHHHH
Confidence 9999999754432 2345789999999998432 1235778999999986
No 221
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.96 E-value=2.9e-30 Score=272.50 Aligned_cols=190 Identities=27% Similarity=0.381 Sum_probs=154.7
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEe-------
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN------- 650 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~------- 650 (782)
+.++|++.+.||+|+||.||+|.. .+++.||||++... ....+.+.+|++++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT---EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP 80 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc---HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhh
Confidence 467899999999999999999965 57899999999653 3456789999999999999999999998865
Q ss_pred ------CCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCC
Q 003982 651 ------GSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM 724 (782)
Q Consensus 651 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~ 724 (782)
....++||||+++++|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~ 153 (303)
T 1zy4_A 81 MTAVKKKSTLFIQMEYCENGTLYDLIHSE----NLNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESR 153 (303)
T ss_dssp -----CEEEEEEEEECCCSCBHHHHHHHS----CGGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTS
T ss_pred hcccccCCceEEEEecCCCCCHHHhhhcc----ccccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCC
Confidence 35679999999999999999752 2357889999999999999999999 8999999999999999999
Q ss_pred cEEEEeeccceecCCCC-------------ceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 725 RAKVADFGLVKNAPDGK-------------YSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 725 ~~kL~DfG~a~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.+||+|||++....... ........||+.|+|||++.+. ..++.++||||+|++
T Consensus 154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~i 220 (303)
T 1zy4_A 154 NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGT--GHYNEKIDMYSLGII 220 (303)
T ss_dssp CEEECCCCCCSCTTC-------------------------CTTSCHHHHTSC--SCCCTHHHHHHHHHH
T ss_pred CEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCC--CCCcchhhHHHHHHH
Confidence 99999999998664321 1112334689999999998753 124678999999986
No 222
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.96 E-value=2.6e-30 Score=268.40 Aligned_cols=185 Identities=30% Similarity=0.509 Sum_probs=147.3
Q ss_pred hcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCC--hhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMG--NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
.++|++.+.||+|+||.||+|.. .++.||||++...... ....+.+++|+++++.++||||+++++++.+++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 36789999999999999999987 4899999998765322 23457899999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC---eEEcCCCCCCEEECC--------CCcE
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQS---FIHRDLKPSNILIGD--------DMRA 726 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~---ivHrDikp~NIll~~--------~~~~ 726 (782)
|||+++++|.+++.. ..+++.++..++.|++.||+|||+ .| |+||||||+||+++. ++.+
T Consensus 85 ~e~~~~~~L~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH~---~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~ 155 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG------KRIPPDILVNWAVQIARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKIL 155 (271)
T ss_dssp EECCTTEEHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHHH---SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCE
T ss_pred EEcCCCCCHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCCCceeecCCchHHEEEecccccccccCcce
Confidence 999999999998843 458999999999999999999999 67 999999999999986 6789
Q ss_pred EEEeeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 727 KVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 727 kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
||+|||++........ ....||+.|+|||++.+. .++.++|+||+|++
T Consensus 156 kl~Dfg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~ 203 (271)
T 3dtc_A 156 KITDFGLAREWHRTTK---MSAAGAYAWMAPEVIRAS---MFSKGSDVWSYGVL 203 (271)
T ss_dssp EECCCCC----------------CCGGGSCHHHHHHC---CCSHHHHHHHHHHH
T ss_pred EEccCCcccccccccc---cCCCCccceeCHHHhccC---CCCchhhHHHHHHH
Confidence 9999999986654322 234689999999987654 35778999999986
No 223
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.96 E-value=9.4e-31 Score=279.22 Aligned_cols=188 Identities=24% Similarity=0.361 Sum_probs=150.9
Q ss_pred cCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEEE
Q 003982 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 659 (782)
++|++.+.||+|+||.||+|.. .+++.||||++..... ......+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc-cccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 5799999999999999999965 4789999999975431 1122245679999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecCC
Q 003982 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (782)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~~ 739 (782)
|++ |+|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 152 (324)
T 3mtl_A 81 YLD-KDLKQYLDDC----GNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSI 152 (324)
T ss_dssp CCS-EEHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC--
T ss_pred ccc-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccC
Confidence 996 5898888763 2358999999999999999999999 8999999999999999999999999999986653
Q ss_pred CCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 740 GKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
... ......||+.|+|||++.+. ..++.++||||+|++
T Consensus 153 ~~~-~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~i 190 (324)
T 3mtl_A 153 PTK-TYDNEVVTLWYRPPDILLGS--TDYSTQIDMWGVGCI 190 (324)
T ss_dssp -----------CGGGCCHHHHTTC--CCCCTHHHHHHHHHH
T ss_pred Ccc-ccccccCcccccChhhhcCC--CCCCcHHHHHHHHHH
Confidence 322 22334689999999987653 234678999999986
No 224
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.96 E-value=3.1e-30 Score=269.91 Aligned_cols=187 Identities=27% Similarity=0.484 Sum_probs=160.7
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCC-hhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
.++|++.+.||+|+||.||+|.. .+++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 36799999999999999999965 46789999999754321 22356789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
|||+++++|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++...
T Consensus 93 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~ 164 (284)
T 2vgo_A 93 LEFAPRGELYKELQKH-----GRFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHA 164 (284)
T ss_dssp ECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccC
Confidence 9999999999999763 358999999999999999999998 89999999999999999999999999999766
Q ss_pred CCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 738 PDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.... .....|++.|+|||++.+. .++.++|+||+|++
T Consensus 165 ~~~~---~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 201 (284)
T 2vgo_A 165 PSLR---RRTMCGTLDYLPPEMIEGK---THDEKVDLWCAGVL 201 (284)
T ss_dssp SSSC---BCCCCSCGGGCCHHHHTTC---CBCTTHHHHHHHHH
T ss_pred cccc---cccccCCCCcCCHHHhccC---CCCcccchhhHHHH
Confidence 5422 1235689999999998765 34668999999986
No 225
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.96 E-value=2.2e-30 Score=276.19 Aligned_cols=191 Identities=25% Similarity=0.341 Sum_probs=154.3
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCC------hhhHHHHHHHHHHHHhcCCCCcceEEeEEEeC
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG------NKGLSEFQAEIAVLTKVRHRHLVALLGYCING 651 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~ 651 (782)
..++|++.+.||+|+||.||+|.. .+++.||||++...... ......+.+|++++++++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 457899999999999999999955 56889999999764321 12334688999999999999999999998765
Q ss_pred CeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCc---EEE
Q 003982 652 SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR---AKV 728 (782)
Q Consensus 652 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~---~kL 728 (782)
. .++||||+++++|.+++.. ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++. +||
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl 158 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKI 158 (322)
T ss_dssp S-EEEEEECCTTEETHHHHST-----TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEEE
T ss_pred c-eEEEEecCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEEE
Confidence 4 8999999999999998854 3468999999999999999999999 89999999999999987654 999
Q ss_pred EeeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 729 ADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 729 ~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+|||+++....... .....||+.|+|||++.+.-...++.++||||+|++
T Consensus 159 ~Dfg~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~i 208 (322)
T 2ycf_A 159 TDFGHSKILGETSL--MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 208 (322)
T ss_dssp CCCTTCEECCCCHH--HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHH
T ss_pred ccCccceecccccc--cccccCCcCccCchhhccCCCCCCCchhhHHHHHHH
Confidence 99999987754321 223468999999998742211245678999999986
No 226
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.96 E-value=4.3e-30 Score=268.33 Aligned_cols=189 Identities=24% Similarity=0.409 Sum_probs=154.9
Q ss_pred hcCCCccceeecccceEEEEEEeCC----CcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELPD----GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL 655 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~ 655 (782)
.++|++.+.||+|+||.||+|.... +..||+|++.... .....+.+.+|++++++++||||+++++++.+ +..+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 4678999999999999999996432 3469999987653 24456789999999999999999999999765 4568
Q ss_pred EEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccce
Q 003982 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (782)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~ 735 (782)
+||||+++++|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++.
T Consensus 89 ~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 161 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERN----KNSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSR 161 (281)
T ss_dssp EEEECCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGG
T ss_pred EEEecCCCCCHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCc
Confidence 999999999999999763 2358999999999999999999999 899999999999999999999999999998
Q ss_pred ecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 736 NAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 736 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..............+|+.|+|||++.+. .++.++||||+|++
T Consensus 162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 203 (281)
T 3cc6_A 162 YIEDEDYYKASVTRLPIKWMSPESINFR---RFTTASDVWMFAVC 203 (281)
T ss_dssp CC---------CCCCCGGGCCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred ccccccccccccCCCCcceeCchhhccC---CCCchhccHHHHHH
Confidence 7765443333344678899999988654 45778999999986
No 227
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.96 E-value=3.8e-30 Score=273.19 Aligned_cols=197 Identities=29% Similarity=0.485 Sum_probs=152.7
Q ss_pred HHhcCCCccceeecccceEEEEEEeC----CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCe
Q 003982 578 QVTDNFSEANILGRGGFGVVYGGELP----DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE 653 (782)
Q Consensus 578 ~~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~ 653 (782)
...++|.+.+.||+|+||.||+|... ++..||+|+++.........+.+.+|++++++++||||+++++++.+...
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 34578999999999999999999543 34589999998765555667889999999999999999999999987653
Q ss_pred -----EEEEEEccCCCCHHHHHHhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEE
Q 003982 654 -----RLLVYEYMPRGTLAQHLFEWHD-HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727 (782)
Q Consensus 654 -----~~lv~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~k 727 (782)
.++||||+++++|.+++..... .....+++.+++.++.|+++||.|||+ .||+||||||+||+++.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEE
Confidence 4999999999999999865332 234568999999999999999999998 8999999999999999999999
Q ss_pred EEeeccceecCCCCce-eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 728 VADFGLVKNAPDGKYS-VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 728 L~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|+|||+++........ ......+++.|+|||++.+. .++.++||||+|++
T Consensus 188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 238 (313)
T 3brb_A 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADR---VYTSKSDVWAFGVT 238 (313)
T ss_dssp ECSCSCC----------------CCGGGSCHHHHHSS---CCCHHHHHHHHHHH
T ss_pred EeecCcceecccccccCcccccCCCccccCchhhcCC---CccchhhhHHHHHH
Confidence 9999999876543321 22334578899999998764 45778999999986
No 228
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.96 E-value=6.7e-30 Score=268.31 Aligned_cols=189 Identities=25% Similarity=0.380 Sum_probs=156.2
Q ss_pred hcCCCccc-eeecccceEEEEEEe---CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEE
Q 003982 580 TDNFSEAN-ILGRGGFGVVYGGEL---PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERL 655 (782)
Q Consensus 580 ~~~y~~~~-~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~ 655 (782)
.++|.+.+ .||+|+||.||+|.. .+++.||||+++.........+++.+|++++++++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 35678887 999999999999943 3468899999987654445578899999999999999999999998 567789
Q ss_pred EEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccce
Q 003982 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (782)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~ 735 (782)
+||||+++++|.+++.. ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++.
T Consensus 94 lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQ-----NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp EEEECCTTEEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEeCCCCCHHHHHHh-----CcCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 99999999999999976 2458999999999999999999999 899999999999999999999999999998
Q ss_pred ecCCCCcee--eecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 736 NAPDGKYSV--ETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 736 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
......... .....+++.|+|||++.+. .++.++||||+|++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 209 (291)
T 1xbb_A 166 ALRADENYYKAQTHGKWPVKWYAPECINYY---KFSSKSDVWSFGVL 209 (291)
T ss_dssp ECCTTCSEEEC----CCCGGGCCHHHHHHC---EEEHHHHHHHHHHH
T ss_pred eeccCCCcccccccCCCCceeeChHHhccC---CCChhhhHHHHHHH
Confidence 775543222 2223467899999988654 45778999999986
No 229
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.96 E-value=1.3e-30 Score=296.63 Aligned_cols=188 Identities=30% Similarity=0.495 Sum_probs=160.5
Q ss_pred hcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 659 (782)
.++|++.+.||+|+||.||+|.+.++..||||+++... ...++|.+|+++|++++||||+++++++.+ +..++|||
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 45788999999999999999988888889999998654 235689999999999999999999999866 67899999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecCC
Q 003982 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (782)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~~ 739 (782)
|+++|+|.+++..... ..+++.++..++.|++.||+|||+ +||+||||||+|||++.++.+||+|||+++....
T Consensus 342 ~~~~gsL~~~l~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 415 (535)
T 2h8h_A 342 YMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 415 (535)
T ss_dssp CCTTEEHHHHHSHHHH---TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred hhcCCcHHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence 9999999999975322 348999999999999999999999 8999999999999999999999999999987654
Q ss_pred CCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 740 GKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..........++..|+|||++.+. .++.++|||||||+
T Consensus 416 ~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~sDvwSlGv~ 453 (535)
T 2h8h_A 416 NEYTARQGAKFPIKWTAPEAALYG---RFTIKSDVWSFGIL 453 (535)
T ss_dssp HHHHTTCSTTSCGGGSCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred CceecccCCcCcccccCHHHhccC---CCCchhhHHHHHHH
Confidence 332222334567899999987654 35778999999986
No 230
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.96 E-value=3e-30 Score=279.76 Aligned_cols=187 Identities=27% Similarity=0.392 Sum_probs=160.6
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 658 (782)
.++|++.+.||+|+||.||+|.. .+++.||+|++.... .....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 110 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 110 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc-CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence 46799999999999999999965 478999999997653 3445678999999999999999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecC
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~ 738 (782)
||+++++|.+++... ..+++..+..++.|++.||+|||+. .||+||||||+||+++.++.+||+|||++....
T Consensus 111 e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 183 (360)
T 3eqc_A 111 EHMDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183 (360)
T ss_dssp CCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred ECCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHh--CCEEcCCccHHHEEECCCCCEEEEECCCCcccc
Confidence 999999999999763 3589999999999999999999971 389999999999999999999999999987553
Q ss_pred CCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 739 DGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
... .....||+.|+|||++.+. .++.++||||+|++
T Consensus 184 ~~~---~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~i 219 (360)
T 3eqc_A 184 DSM---ANSFVGTRSYMSPERLQGT---HYSVQSDIWSMGLS 219 (360)
T ss_dssp HHC-------CCCCTTCCHHHHTTC---CCSHHHHHHHHHHH
T ss_pred ccc---ccCCCCCCCeECHHHHcCC---CCCchhhHHHHHHH
Confidence 211 2234789999999998765 45788999999986
No 231
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.96 E-value=3.8e-30 Score=274.41 Aligned_cols=195 Identities=26% Similarity=0.489 Sum_probs=162.8
Q ss_pred HhcCCCccceeecccceEEEEEEeC------CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCC
Q 003982 579 VTDNFSEANILGRGGFGVVYGGELP------DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS 652 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~ 652 (782)
..++|++.+.||+|+||.||+|... +++.||||++.... .......+.+|++++++++||||+++++++.+.+
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 101 (322)
T 1p4o_A 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 101 (322)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS
T ss_pred hhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC
Confidence 4578999999999999999999543 46789999997543 2345667999999999999999999999999999
Q ss_pred eEEEEEEccCCCCHHHHHHhhcc-----CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEE
Q 003982 653 ERLLVYEYMPRGTLAQHLFEWHD-----HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAK 727 (782)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~-----~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~k 727 (782)
..++||||+++|+|.+++..... .....+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+|
T Consensus 102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli~~~~~~k 178 (322)
T 1p4o_A 102 PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVK 178 (322)
T ss_dssp SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCEE
T ss_pred ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEEEcCCCeEE
Confidence 99999999999999999976432 112457899999999999999999999 8999999999999999999999
Q ss_pred EEeeccceecCCCCce-eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 728 VADFGLVKNAPDGKYS-VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 728 L~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|+|||+++........ ......||+.|+|||++.+. .++.++||||+|++
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 229 (322)
T 1p4o_A 179 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG---VFTTYSDVWSFGVV 229 (322)
T ss_dssp ECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred ECcCccccccccccccccccCCCCCCCccChhhhccC---CCCchhhHHHHHHH
Confidence 9999999866443322 12234578899999987654 35778999999986
No 232
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.96 E-value=1e-29 Score=272.07 Aligned_cols=181 Identities=21% Similarity=0.365 Sum_probs=156.0
Q ss_pred hcCCCccceeecccceEEEEEE-eCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcC-CCCcceEEeEEEe--CCeEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGYCIN--GSERL 655 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nI~~~~~~~~~--~~~~~ 655 (782)
.++|++.+.||+|+||.||+|. ..+++.||||+++.. ..+.+.+|++++++++ ||||+++++++.+ ....+
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 109 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 109 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence 3679999999999999999995 467899999998743 3477999999999997 9999999999988 66789
Q ss_pred EEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCC-cEEEEeeccc
Q 003982 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDM-RAKVADFGLV 734 (782)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~-~~kL~DfG~a 734 (782)
+||||+++++|.+++.. +++.++..++.|++.||+|||+ .||+||||||+||+++.++ .+||+|||+|
T Consensus 110 lv~e~~~~~~l~~~~~~--------~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a 178 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQT--------LTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 178 (330)
T ss_dssp EEEECCCCCCHHHHGGG--------CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEeccCchhHHHHHHh--------CCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCc
Confidence 99999999999988743 7899999999999999999999 8999999999999999776 8999999999
Q ss_pred eecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 735 KNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 735 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+....... .....||+.|+|||++.+. ..++.++||||+||+
T Consensus 179 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~i 220 (330)
T 3nsz_A 179 EFYHPGQE--YNVRVASRYFKGPELLVDY--QMYDYSLDMWSLGCM 220 (330)
T ss_dssp EECCTTCC--CCSCCSCGGGCCHHHHTTC--CCCCTHHHHHHHHHH
T ss_pred eEcCCCCc--cccccccccccChhhhcCC--CcCCchhhHHHHHHH
Confidence 87654332 2334789999999988653 134678999999986
No 233
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.96 E-value=9e-31 Score=285.52 Aligned_cols=192 Identities=16% Similarity=0.235 Sum_probs=153.0
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccC-ChhhHHHHHHHHH---HHHhcCCCCcceEE-------eE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTM-GNKGLSEFQAEIA---VLTKVRHRHLVALL-------GY 647 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~---~l~~l~h~nI~~~~-------~~ 647 (782)
.++|++.+.||+|+||+||+|.. .+|+.||||++..... .....+.+.+|++ ++++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788999999999999999965 5799999999976532 2345678999994 55556799999998 66
Q ss_pred EEeCCe-----------------EEEEEEccCCCCHHHHHHhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 003982 648 CINGSE-----------------RLLVYEYMPRGTLAQHLFEWHDHG--YTPLTWKQRVTIALDVARGVEYLHSLAQQSF 708 (782)
Q Consensus 648 ~~~~~~-----------------~~lv~e~~~~gsL~~~l~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~i 708 (782)
+.+++. .|+||||+ +|+|.+++....... ...+++..+..++.|++.||+|||+ .||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCe
Confidence 665532 78999999 689999998643221 1234468888999999999999999 899
Q ss_pred EEcCCCCCCEEECCCCcEEEEeeccceecCCCCceeeecccccccccCccccccc--------hhhhHHHHHHHHHhccc
Q 003982 709 IHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKH--------WMILCQMTGLIWLHGSV 780 (782)
Q Consensus 709 vHrDikp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--------~~~~~~~~~dvws~Gvv 780 (782)
+||||||+|||++.++.+||+|||+|+.... .....+| +.|+|||++.+. -...++.++||||+||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999986543 2234567 999999998763 00135789999999986
No 234
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.96 E-value=3.5e-30 Score=276.93 Aligned_cols=194 Identities=27% Similarity=0.375 Sum_probs=158.7
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHH-HHhcCCCCcceEEeEEEeCCeEEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAV-LTKVRHRHLVALLGYCINGSERLL 656 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~-l~~l~h~nI~~~~~~~~~~~~~~l 656 (782)
..++|++.+.||+|+||.||+|.. .+|+.||||++...... ....++..|+.+ ++.++||||+++++++.+++..++
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS-QEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCC-HHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCc-HHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 346899999999999999999964 67899999999765432 334555555555 778899999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CeEEcCCCCCCEEECCCCcEEEEeeccce
Q 003982 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQ-SFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (782)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~-~ivHrDikp~NIll~~~~~~kL~DfG~a~ 735 (782)
||||+++ +|.+++...... ...+++..+..++.|++.||+|||+ . ||+||||||+||+++.++.+||+|||+++
T Consensus 128 v~e~~~~-~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 202 (340)
T 3an0_A 128 CMELMDT-SLDKFYKQVIDK-GQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISG 202 (340)
T ss_dssp EECCCSE-EHHHHHHHHHHT-SCCCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCSCCSTTEEECSTTCEEECCCSHHH
T ss_pred EHHHhhC-cHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeeCCCce
Confidence 9999975 999988764333 3568999999999999999999997 5 99999999999999999999999999998
Q ss_pred ecCCCCceeeecccccccccCccccccc-hhhhHHHHHHHHHhccc
Q 003982 736 NAPDGKYSVETRLAGTFGYLAPEYAGKH-WMILCQMTGLIWLHGSV 780 (782)
Q Consensus 736 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~~dvws~Gvv 780 (782)
...... ......||+.|+|||++.+. ....++.++||||+|++
T Consensus 203 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~i 246 (340)
T 3an0_A 203 YLVDSV--AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGIT 246 (340)
T ss_dssp HHSCHH--HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHH
T ss_pred eccccc--ccccCCCCccccCccccccccccCCCCchhhHHHHHHH
Confidence 765422 12234689999999987543 11245788999999986
No 235
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.96 E-value=4.6e-30 Score=270.65 Aligned_cols=190 Identities=27% Similarity=0.394 Sum_probs=157.1
Q ss_pred cCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEEE
Q 003982 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 659 (782)
++|++.+.||+|+||.||+|.. .+++.||||++..........+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 6799999999999999999965 478999999997655434445788999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecCC
Q 003982 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (782)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~~ 739 (782)
|++ ++|.+++.... ...+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||.+.....
T Consensus 83 ~~~-~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 155 (299)
T 2r3i_A 83 FLH-QDLKKFMDASA---LTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155 (299)
T ss_dssp CCS-EEHHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred ccc-CCHHHHHHhhh---ccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence 997 69999887632 2458999999999999999999999 8999999999999999999999999999977643
Q ss_pred CCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 740 GKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
... ......||+.|+|||++.+.- ..+.++|+||+|++
T Consensus 156 ~~~-~~~~~~~~~~y~aPE~~~~~~--~~~~~~Di~slG~~ 193 (299)
T 2r3i_A 156 PVR-TYTHEVVTLWYRAPEILLGAK--YYSTAVDIWSLGCI 193 (299)
T ss_dssp CSB-CTTSCBCCCTTCCHHHHTTCS--SCCTHHHHHHHHHH
T ss_pred Ccc-ccCcccccccccCcHHhhccc--cCChHHHHHHHHHH
Confidence 321 122346899999999887641 24668999999986
No 236
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.96 E-value=4e-30 Score=278.99 Aligned_cols=198 Identities=23% Similarity=0.325 Sum_probs=158.5
Q ss_pred ccHHHHHHHhcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCC---------hhhHHHHHHHHHHHHhcCCCCc
Q 003982 571 ISIEVLRQVTDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMG---------NKGLSEFQAEIAVLTKVRHRHL 641 (782)
Q Consensus 571 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------~~~~~~~~~E~~~l~~l~h~nI 641 (782)
...+++....++|++.+.||+|+||.||+|...+++.||||++...... ....+.+.+|++++++++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 4567788899999999999999999999998888999999999654322 1234789999999999999999
Q ss_pred ceEEeEEEeC-----CeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCC
Q 003982 642 VALLGYCING-----SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPS 716 (782)
Q Consensus 642 ~~~~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~ 716 (782)
+++++++... ...++||||++ |++.+++... ...+++.++..++.|++.||.|||+ .||+||||||+
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~ 163 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ----RIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPG 163 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGG
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChH
Confidence 9999998543 36799999997 6888888642 3468999999999999999999999 89999999999
Q ss_pred CEEECCCCcEEEEeeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 717 NILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 717 NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
||+++.++.+||+|||+++...... ......||+.|+|||++.+. ..++.++||||+|++
T Consensus 164 NIl~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~i 223 (362)
T 3pg1_A 164 NILLADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQF--KGFTKLVDMWSAGCV 223 (362)
T ss_dssp GEEECTTCCEEECCTTC-----------------CGGGCCHHHHTTC--TTCCTHHHHHHHHHH
T ss_pred HEEEcCCCCEEEEecCccccccccc--ccceecccceecCcHHhcCC--CCCCcHhHHHhHHHH
Confidence 9999999999999999997554322 22345789999999988763 235778999999986
No 237
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.96 E-value=1.8e-30 Score=277.20 Aligned_cols=189 Identities=25% Similarity=0.482 Sum_probs=153.7
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcE----EEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTK----IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER 654 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~ 654 (782)
.++|++.+.||+|+||.||+|.. .+++. ||+|.+.... .....+.+.+|+.++++++||||+++++++. .+..
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 89 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSL 89 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT-SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc-cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCcc
Confidence 35789999999999999999965 34554 7888775432 2233456789999999999999999999886 4668
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccc
Q 003982 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV 734 (782)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a 734 (782)
++||||+++|+|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++
T Consensus 90 ~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a 162 (325)
T 3kex_A 90 QLVTQYLPLGSLLDHVRQH----RGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVA 162 (325)
T ss_dssp EEEEECCTTCBSHHHHHSS----GGGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGG
T ss_pred EEEEEeCCCCCHHHHHHHc----cccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCcc
Confidence 9999999999999998653 2358889999999999999999999 89999999999999999999999999999
Q ss_pred eecCCCCce-eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 735 KNAPDGKYS-VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 735 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+........ ......||+.|+|||++.+. .++.++||||+|++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~ 206 (325)
T 3kex_A 163 DLLPPDDKQLLYSEAKTPIKWMALESIHFG---KYTHQSDVWSYGVT 206 (325)
T ss_dssp GGSCCCTTCCC-----CCTTTSCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred cccCcccccccccCCCCcccccChHHhccC---CCChhhHhHHhHHH
Confidence 877544322 22345678899999998754 35778999999986
No 238
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=8.8e-30 Score=266.86 Aligned_cols=188 Identities=26% Similarity=0.400 Sum_probs=158.0
Q ss_pred cCCCccc-eeecccceEEEEEEeC---CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEE
Q 003982 581 DNFSEAN-ILGRGGFGVVYGGELP---DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLL 656 (782)
Q Consensus 581 ~~y~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l 656 (782)
++|.+.+ .||+|+||.||+|... ++..||||+++... .....+.+.+|++++++++||||+++++++ ..+..++
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc-chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 4566666 9999999999999643 57789999997643 345667899999999999999999999998 5567899
Q ss_pred EEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeecccee
Q 003982 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (782)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~ 736 (782)
||||+++++|.+++... ...+++.++..++.|++.||.|||+ .||+||||||+||+++.++.+||+|||++..
T Consensus 87 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 159 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKA 159 (287)
T ss_dssp EEECCTTEEHHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEeCCCCCHHHHHHhC----CccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceee
Confidence 99999999999998642 3458999999999999999999999 8999999999999999999999999999988
Q ss_pred cCCCCcee--eecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 737 APDGKYSV--ETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 737 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
........ .....||+.|+|||++.+. .++.++|+||+|++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 202 (287)
T 1u59_A 160 LGADDSYYTARSAGKWPLKWYAPECINFR---KFSSRSDVWSYGVT 202 (287)
T ss_dssp CTTCSCEECCCCSSCCCGGGCCHHHHHHC---EECHHHHHHHHHHH
T ss_pred eccCcceeeccccccccccccCHHHhccC---CCCchhhHHHHHHH
Confidence 75433221 2233568999999988654 45778999999986
No 239
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.96 E-value=1.6e-30 Score=281.87 Aligned_cols=185 Identities=27% Similarity=0.425 Sum_probs=141.9
Q ss_pred hcCCCccceeecccceEEEEEE-eCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeC------C
Q 003982 580 TDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING------S 652 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~------~ 652 (782)
.++|++.+.||+|+||.||+|. ..+|+.||||++..........+++.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 4789999999999999999995 56789999999976554455677889999999999999999999998754 5
Q ss_pred eEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeec
Q 003982 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG 732 (782)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG 732 (782)
..++||||+ +++|.+++.. ..+++.++..++.|+++||+|||+ .||+||||||+||+++.++.+||+|||
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG 177 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 177 (367)
T ss_dssp CCEEEEECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC--
T ss_pred eEEEEeccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeecc
Confidence 679999999 7899888754 358999999999999999999999 899999999999999999999999999
Q ss_pred cceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 733 LVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 733 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+++..... .....||+.|+|||++.+. ..++.++||||+|++
T Consensus 178 ~a~~~~~~----~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~i 219 (367)
T 2fst_X 178 LARHTADE----MTGYVATRWYRAPEIMLNW--MHYNQTVDIWSVGCI 219 (367)
T ss_dssp -----------------CCCTTCCHHHHTTC--CSCCTTHHHHHHHHH
T ss_pred cccccccc----CCCcCcCcCccChHHHcCC--cCCCchhhHHHHHHH
Confidence 99875432 2335789999999987652 134667899999986
No 240
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.96 E-value=3.5e-30 Score=273.81 Aligned_cols=202 Identities=24% Similarity=0.399 Sum_probs=165.5
Q ss_pred cHHHHHHHhcCCCccceeecccceEEEEEEe------CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhc-CCCCcceE
Q 003982 572 SIEVLRQVTDNFSEANILGRGGFGVVYGGEL------PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVAL 644 (782)
Q Consensus 572 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~ 644 (782)
.........++|++.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+++++++ +||||+++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC-CcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 3444445578899999999999999999963 356889999997643 344567899999999999 69999999
Q ss_pred EeEEEeCC-eEEEEEEccCCCCHHHHHHhhccCC-----------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcC
Q 003982 645 LGYCINGS-ERLLVYEYMPRGTLAQHLFEWHDHG-----------YTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRD 712 (782)
Q Consensus 645 ~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrD 712 (782)
++++...+ ..++||||+++++|.+++....... ...+++.++..++.|++.||.|||+ .||+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCccccc
Confidence 99988754 4899999999999999997633210 1227899999999999999999999 8999999
Q ss_pred CCCCCEEECCCCcEEEEeeccceecCCCCc-eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 713 LKPSNILIGDDMRAKVADFGLVKNAPDGKY-SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 713 ikp~NIll~~~~~~kL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|||+||+++.++.+||+|||+++....... .......||+.|+|||++.+. .++.++||||+|++
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~i 239 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR---VYTIQSDVWSFGVL 239 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccc---cccchhHHHHHHHH
Confidence 999999999999999999999987654332 233345678999999988654 45788999999986
No 241
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.96 E-value=9.7e-30 Score=271.72 Aligned_cols=189 Identities=29% Similarity=0.509 Sum_probs=159.7
Q ss_pred hcCCCccceeecccceEEEEEEe-----CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCC--
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-----PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS-- 652 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~-- 652 (782)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 117 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 117 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC--SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence 45788999999999999999973 468899999997643 455678999999999999999999999987654
Q ss_pred eEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeec
Q 003982 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG 732 (782)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG 732 (782)
..++||||+++++|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg 190 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFG 190 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHHS----TTSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCT
T ss_pred ceEEEEECCCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCc
Confidence 679999999999999999763 2358999999999999999999999 899999999999999999999999999
Q ss_pred cceecCCCCcee--eecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 733 LVKNAPDGKYSV--ETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 733 ~a~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
++.......... .....++..|+|||++.+. .++.++||||+|++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 237 (326)
T 2w1i_A 191 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTES---KFSVASDVWSFGVV 237 (326)
T ss_dssp TCEECCSSCSEEECSSCCSCCGGGCCHHHHHHC---EEEHHHHHHHHHHH
T ss_pred chhhccccccccccccCCCCceeEECchhhcCC---CCCchhhHHHHHHH
Confidence 998876543221 2234577889999988664 35778999999986
No 242
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.96 E-value=3.9e-30 Score=272.22 Aligned_cols=184 Identities=30% Similarity=0.487 Sum_probs=149.2
Q ss_pred cCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEEEc
Q 003982 581 DNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 660 (782)
++|++.+.||+|+||.||+|.. .++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++||||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~ 80 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEY 80 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEEC
T ss_pred hHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEc
Confidence 5788999999999999999987 4789999998643 345789999999999999999999998763 47899999
Q ss_pred cCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCc-EEEEeeccceecCC
Q 003982 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR-AKVADFGLVKNAPD 739 (782)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~-~kL~DfG~a~~~~~ 739 (782)
+++++|.+++..... ...+++.++..++.|+++||+|||+.+.+||+||||||+||+++.++. +||+|||++.....
T Consensus 81 ~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 81 AEGGSLYNVLHGAEP--LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp CTTCBHHHHHHCSSS--EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred CCCCCHHHHHhccCC--CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 999999999975321 224788999999999999999999744468999999999999988876 79999999976543
Q ss_pred CCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 740 GKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.. ....||+.|+|||++.+. .++.++||||+|++
T Consensus 159 ~~----~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~i 192 (307)
T 2eva_A 159 HM----TNNKGSAAWMAPEVFEGS---NYSEKCDVFSWGII 192 (307)
T ss_dssp ----------CCTTSSCHHHHTCC---CCCTHHHHHHHHHH
T ss_pred cc----ccCCCCCceEChhhhCCC---CCCcHHHHHHHHHH
Confidence 22 234689999999998764 45678999999986
No 243
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.96 E-value=8.6e-30 Score=276.44 Aligned_cols=188 Identities=24% Similarity=0.369 Sum_probs=157.8
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeC-----Ce
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING-----SE 653 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~-----~~ 653 (782)
.++|++.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|++++++++||||+++++++... ..
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc-CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 46799999999999999999954 578899999997533 234567899999999999999999999998765 46
Q ss_pred EEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeecc
Q 003982 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGL 733 (782)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~ 733 (782)
.++||||++ ++|.+++.. ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+
T Consensus 105 ~~iv~e~~~-~~L~~~l~~------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 174 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKT------QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGL 174 (364)
T ss_dssp EEEEEECCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEcccC-cCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcc
Confidence 899999996 589998865 358999999999999999999999 8999999999999999999999999999
Q ss_pred ceecCCCCcee--eecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 734 VKNAPDGKYSV--ETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 734 a~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
++......... ....+||+.|+|||++.+. ..++.++||||+|++
T Consensus 175 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwslG~i 221 (364)
T 3qyz_A 175 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNS--KGYTKSIDIWSVGCI 221 (364)
T ss_dssp CEECCGGGCBCCTTCCCCSCGGGCCHHHHHTB--CSCSTHHHHHHHHHH
T ss_pred eEecCCCCCccccccccccccCCCCCHHhcCC--CCCCcchhHHHHHHH
Confidence 98765432211 2335799999999986543 235678999999986
No 244
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=9.5e-30 Score=272.49 Aligned_cols=190 Identities=26% Similarity=0.432 Sum_probs=153.1
Q ss_pred hcCCCccceeecccceEEEEEEeCC-----CcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELPD-----GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER 654 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~ 654 (782)
.++|++.+.||+|+||.||+|.... +..||||+++... .......+.+|++++++++||||+++++++.+.+..
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 121 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM 121 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCc
Confidence 3578889999999999999996432 2359999997543 344567799999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccc
Q 003982 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV 734 (782)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a 734 (782)
++||||+++++|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++
T Consensus 122 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 194 (333)
T 1mqb_A 122 MIITEYMENGALDKFLREK----DGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLS 194 (333)
T ss_dssp EEEEECCTTEEHHHHHHHT----TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred EEEEeCCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcc
Confidence 9999999999999999752 2458999999999999999999999 89999999999999999999999999999
Q ss_pred eecCCCCce--eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 735 KNAPDGKYS--VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 735 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+........ ......+|+.|+|||++.+. .++.++||||+|++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 239 (333)
T 1mqb_A 195 RVLEDDPEATYTTSGGKIPIRWTAPEAISYR---KFTSASDVWSFGIV 239 (333)
T ss_dssp ----------------CCCGGGSCHHHHHSC---CCCHHHHHHHHHHH
T ss_pred hhhccccccccccCCCCccccccCchhcccC---CCCchhhhHHHHHH
Confidence 876543211 11223468899999988654 45778999999986
No 245
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.96 E-value=1.5e-29 Score=280.14 Aligned_cols=184 Identities=21% Similarity=0.279 Sum_probs=157.2
Q ss_pred hcCCCccceeecccceEEEEEE-eCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhc------CCCCcceEEeEEEeCC
Q 003982 580 TDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV------RHRHLVALLGYCINGS 652 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l------~h~nI~~~~~~~~~~~ 652 (782)
..+|++.+.||+|+||.||+|. ..+++.||||++... ....+.+.+|+++++.+ +|+||+++++++....
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 172 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN 172 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence 4679999999999999999995 456899999999753 24456788899888887 5779999999999999
Q ss_pred eEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCc--EEEEe
Q 003982 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR--AKVAD 730 (782)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~--~kL~D 730 (782)
..++||||+. ++|.+++.... ...+++..+..++.|++.||+|||+ .||+||||||+|||++.++. +||+|
T Consensus 173 ~~~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~D 245 (429)
T 3kvw_A 173 HICMTFELLS-MNLYELIKKNK---FQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVID 245 (429)
T ss_dssp EEEEEECCCC-CBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEECC
T ss_pred eEEEEEeccC-CCHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEee
Confidence 9999999995 69999987632 2458999999999999999999999 89999999999999999887 99999
Q ss_pred eccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 731 FGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 731 fG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
||+|+...... ...+||+.|+|||++.+. .++.++||||+||+
T Consensus 246 FG~a~~~~~~~----~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~i 288 (429)
T 3kvw_A 246 FGSSCYEHQRV----YTYIQSRFYRAPEVILGA---RYGMPIDMWSLGCI 288 (429)
T ss_dssp CTTCEETTCCC----CSSCSCGGGCCHHHHHTB---CCCTHHHHHHHHHH
T ss_pred cccceecCCcc----cccCCCCCccChHHHhCC---CCCchHHHHhHHHH
Confidence 99998765432 235789999999998765 45778999999986
No 246
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.96 E-value=1.2e-29 Score=269.41 Aligned_cols=188 Identities=29% Similarity=0.433 Sum_probs=156.3
Q ss_pred HHhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEE
Q 003982 578 QVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLL 656 (782)
Q Consensus 578 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l 656 (782)
...++|++.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|++++++++||||+++++++.+.+..++
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 4567899999999999999999965 468999999997543 34678999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeecccee
Q 003982 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (782)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~ 736 (782)
||||+++++|.+++... ...+++.++..++.|++.||.|||+ .||+||||||+||+++.++.+||+|||++..
T Consensus 102 v~e~~~~~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 174 (314)
T 3com_A 102 VMEYCGAGSVSDIIRLR----NKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQ 174 (314)
T ss_dssp EEECCTTEEHHHHHHHH----TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EeecCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchh
Confidence 99999999999998642 2458999999999999999999999 8999999999999999999999999999987
Q ss_pred cCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 737 APDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 737 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
...... ......||+.|+|||++.+. .++.++||||+|++
T Consensus 175 ~~~~~~-~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 214 (314)
T 3com_A 175 LTDTMA-KRNTVIGTPFWMAPEVIQEI---GYNCVADIWSLGIT 214 (314)
T ss_dssp CBTTBS-CBCCCCSCGGGCCHHHHSSS---CBCTTHHHHHHHHH
T ss_pred hhhhcc-ccCccCCCCCccChhhcCCC---CCCccccHHHHHHH
Confidence 654322 22345689999999998764 35668899999986
No 247
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.96 E-value=3.2e-29 Score=263.64 Aligned_cols=190 Identities=26% Similarity=0.406 Sum_probs=156.9
Q ss_pred CCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEEEc
Q 003982 582 NFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEY 660 (782)
Q Consensus 582 ~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 660 (782)
+|.....||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 100 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ 100 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC--C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc--hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence 455567999999999999964 578899999997653 34567899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECC-CCcEEEEeeccceecCC
Q 003982 661 MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-DMRAKVADFGLVKNAPD 739 (782)
Q Consensus 661 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~-~~~~kL~DfG~a~~~~~ 739 (782)
+++++|.+++.... +...+++..+..++.|++.||+|||+ .||+||||||+||+++. ++.+||+|||++.....
T Consensus 101 ~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~ 175 (295)
T 2clq_A 101 VPGGSLSALLRSKW--GPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175 (295)
T ss_dssp CSEEEHHHHHHHTT--CCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC
T ss_pred CCCCCHHHHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCC
Confidence 99999999997632 22356789999999999999999999 89999999999999987 89999999999987654
Q ss_pred CCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 740 GKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 740 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
... ......||+.|+|||++.+.. ..++.++|+||+|++
T Consensus 176 ~~~-~~~~~~~~~~y~aPE~~~~~~-~~~~~~~Di~slG~i 214 (295)
T 2clq_A 176 INP-CTETFTGTLQYMAPEIIDKGP-RGYGKAADIWSLGCT 214 (295)
T ss_dssp ------CCCCCCGGGCCHHHHHHGG-GGCSHHHHHHHHHHH
T ss_pred CCC-cccccCCCccccChhhhcCCC-CCCCcHHHHHHHHHH
Confidence 321 123356899999999886531 135778999999986
No 248
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.96 E-value=4.3e-30 Score=275.35 Aligned_cols=194 Identities=26% Similarity=0.431 Sum_probs=161.6
Q ss_pred hcCCCccceeecccceEEEEEEeC-CC-----cEEEEEEeccccCChhhHHHHHHHHHHHHhc-CCCCcceEEeEEEeCC
Q 003982 580 TDNFSEANILGRGGFGVVYGGELP-DG-----TKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGS 652 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~ 652 (782)
.++|++.+.||+|+||.||+|... ++ ..||+|++.... .....+.+.+|+++++++ +||||+++++++.+.+
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 468999999999999999999653 22 479999997643 234567899999999999 8999999999999999
Q ss_pred eEEEEEEccCCCCHHHHHHhhccC---------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCC
Q 003982 653 ERLLVYEYMPRGTLAQHLFEWHDH---------GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD 723 (782)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~---------~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~ 723 (782)
..++||||+++|+|.+++...... ....+++.++..++.|++.||+|||+ .||+||||||+||+++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEEECCC
Confidence 999999999999999999764321 12357999999999999999999999 899999999999999999
Q ss_pred CcEEEEeeccceecCCCCc-eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 724 MRAKVADFGLVKNAPDGKY-SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 724 ~~~kL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+.+||+|||+++....... .......||+.|+|||++.+. .++.++||||+|++
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 255 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDC---VYTVQSDVWSYGIL 255 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccC---CCChHHHHHHHHHH
Confidence 9999999999986543322 222334578899999987654 35788999999986
No 249
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.96 E-value=7.7e-30 Score=268.81 Aligned_cols=190 Identities=30% Similarity=0.492 Sum_probs=156.0
Q ss_pred hcCCCccceeecccceEEEEEEeCC----CcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEE-eCCeE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELPD----GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCI-NGSER 654 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~-~~~~~ 654 (782)
..+|++.+.||+|+||.||+|...+ ...||+|.+.... .....+.+.+|++++++++||||+++++++. .++..
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 102 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP 102 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC-CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCce
Confidence 3568889999999999999996532 2358999987533 3445678999999999999999999999865 45678
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccc
Q 003982 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV 734 (782)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a 734 (782)
++||||+++|+|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++
T Consensus 103 ~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a 175 (298)
T 3f66_A 103 LVVLPYMKHGDLRNFIRNE----THNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLA 175 (298)
T ss_dssp EEEEECCTTCBHHHHHHCT----TCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGG
T ss_pred EEEEeCCCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECccccc
Confidence 9999999999999999652 3457999999999999999999999 89999999999999999999999999999
Q ss_pred eecCCCCc---eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 735 KNAPDGKY---SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 735 ~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+....... .......||+.|+|||++.+. .++.++|+||+|++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 221 (298)
T 3f66_A 176 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ---KFTTKSDVWSFGVL 221 (298)
T ss_dssp CCCSCGGGCBC-----CCBCGGGSCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred ccccccchhccccccCCCCCccccChHHhcCC---CCChHHHHHHHHHH
Confidence 87654332 122334678899999988664 45778999999986
No 250
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.96 E-value=4.7e-30 Score=283.56 Aligned_cols=185 Identities=25% Similarity=0.398 Sum_probs=150.4
Q ss_pred cCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeC------Ce
Q 003982 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING------SE 653 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~------~~ 653 (782)
.+|++.+.||+|+||.||+|.. .+++.||||++.... ..+.+|++++++++||||+++++++... ..
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~ 127 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence 4688999999999999999966 468999999986543 2234799999999999999999988642 23
Q ss_pred EEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCC-CcEEEEeec
Q 003982 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD-MRAKVADFG 732 (782)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~-~~~kL~DfG 732 (782)
.++||||+++ ++.+.+...... ...+++..+..++.|+++||+|||+ .||+||||||+|||++.+ +.+||+|||
T Consensus 128 ~~lv~e~~~~-~l~~~~~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG 202 (420)
T 1j1b_A 128 LNLVLDYVPE-TVYRVARHYSRA-KQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFG 202 (420)
T ss_dssp EEEEEECCCE-EHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred EEeehhcccc-cHHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccch
Confidence 5799999965 777776654332 3568999999999999999999998 899999999999999965 678999999
Q ss_pred cceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 733 LVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 733 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+|+....... ....+||+.|+|||++.+. ..++.++||||+||+
T Consensus 203 ~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwSlG~i 246 (420)
T 1j1b_A 203 SAKQLVRGEP--NVSYICSRYYRAPELIFGA--TDYTSSIDVWSAGCV 246 (420)
T ss_dssp TCEECCTTCC--CCSCCSCTTSCCHHHHTTC--SSCCTHHHHHHHHHH
T ss_pred hhhhcccCCC--ceeeeeCCCcCCHHHHcCC--CCCCchhhhHHHHHH
Confidence 9987654332 2335789999999988653 135678999999986
No 251
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.96 E-value=1.4e-29 Score=266.76 Aligned_cols=193 Identities=30% Similarity=0.383 Sum_probs=161.7
Q ss_pred HHhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCC-------hhhHHHHHHHHHHHHhcC-CCCcceEEeEE
Q 003982 578 QVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-------NKGLSEFQAEIAVLTKVR-HRHLVALLGYC 648 (782)
Q Consensus 578 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~~~E~~~l~~l~-h~nI~~~~~~~ 648 (782)
.+.++|++.+.||+|+||.||+|.. .+++.||||+++..... ....+.+.+|+++++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 4567899999999999999999965 46899999999754311 123466889999999996 99999999999
Q ss_pred EeCCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEE
Q 003982 649 INGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKV 728 (782)
Q Consensus 649 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL 728 (782)
.+....++||||+++++|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl 165 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKL 165 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEE
T ss_pred ccCCeEEEEEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEE
Confidence 9999999999999999999999762 358999999999999999999999 89999999999999999999999
Q ss_pred EeeccceecCCCCceeeecccccccccCccccccch---hhhHHHHHHHHHhccc
Q 003982 729 ADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHW---MILCQMTGLIWLHGSV 780 (782)
Q Consensus 729 ~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~~~~dvws~Gvv 780 (782)
+|||++........ .....||+.|+|||++.+.. ...++.++|+||+|++
T Consensus 166 ~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~ 218 (298)
T 1phk_A 166 TDFGFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVI 218 (298)
T ss_dssp CCCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHH
T ss_pred ecccchhhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHH
Confidence 99999987754332 23356899999999875321 1134668999999986
No 252
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.96 E-value=1.1e-29 Score=271.31 Aligned_cols=191 Identities=31% Similarity=0.526 Sum_probs=154.8
Q ss_pred cCCCccceeecccceEEEEEEe-CCCcEE--EEEEeccccCChhhHHHHHHHHHHHHhc-CCCCcceEEeEEEeCCeEEE
Q 003982 581 DNFSEANILGRGGFGVVYGGEL-PDGTKI--AVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLL 656 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~v--avK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~l 656 (782)
++|++.+.||+|+||.||+|.. .++..+ |+|+++... .....+.+.+|+++++++ +||||+++++++.+.+..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc-chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 5789999999999999999954 456644 999887532 234556789999999999 89999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhcc-----------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCc
Q 003982 657 VYEYMPRGTLAQHLFEWHD-----------HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR 725 (782)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~ 725 (782)
||||+++++|.+++..... .....+++.+++.++.|++.||+|||+ .||+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEcCCCe
Confidence 9999999999999976320 113468999999999999999999999 89999999999999999999
Q ss_pred EEEEeeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 726 AKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 726 ~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+||+|||+++...... ......+++.|+|||++.+. .++.++||||+|++
T Consensus 181 ~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 230 (327)
T 1fvr_A 181 AKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYS---VYTTNSDVWSYGVL 230 (327)
T ss_dssp EEECCTTCEESSCEEC--CC----CCTTTCCHHHHHHC---EECHHHHHHHHHHH
T ss_pred EEEcccCcCccccccc--cccCCCCCccccChhhhccc---cCCchhcchHHHHH
Confidence 9999999987543211 11223568899999988654 35778999999986
No 253
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.96 E-value=5.9e-30 Score=280.37 Aligned_cols=186 Identities=24% Similarity=0.384 Sum_probs=151.3
Q ss_pred hcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCe------
Q 003982 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE------ 653 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~------ 653 (782)
..+|++.+.||+|+||+||+|+...+..||+|++..... ...+|+++++.++||||+++++++...+.
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~ 112 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF 112 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence 457999999999999999999887777799998865431 22479999999999999999999865443
Q ss_pred EEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEEC-CCCcEEEEeec
Q 003982 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG-DDMRAKVADFG 732 (782)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~-~~~~~kL~DfG 732 (782)
.++||||+++ ++.+.+...... ...+++..+..++.|+++||+|||+ .||+||||||+||+++ .++.+||+|||
T Consensus 113 ~~lv~e~~~~-~l~~~~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG 187 (394)
T 4e7w_A 113 LNLVLEYVPE-TVYRASRHYAKL-KQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFG 187 (394)
T ss_dssp EEEEEECCSE-EHHHHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred EEEEeeccCc-cHHHHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCC
Confidence 7899999976 455554433222 3468999999999999999999999 8999999999999998 78999999999
Q ss_pred cceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 733 LVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 733 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+|+....... .....||+.|+|||++.+. ..++.++||||+||+
T Consensus 188 ~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwSlG~i 231 (394)
T 4e7w_A 188 SAKILIAGEP--NVSYICSRYYRAPELIFGA--TNYTTNIDIWSTGCV 231 (394)
T ss_dssp TCEECCTTCC--CCSSCSCGGGCCHHHHTTC--SSCCTHHHHHHHHHH
T ss_pred CcccccCCCC--CcccccCcCccCHHHHcCC--CCCCcHHHHHHHHHH
Confidence 9987754332 2345789999999988653 235678999999986
No 254
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.96 E-value=1.2e-29 Score=265.96 Aligned_cols=191 Identities=26% Similarity=0.399 Sum_probs=164.5
Q ss_pred HHHHhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeE
Q 003982 576 LRQVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER 654 (782)
Q Consensus 576 l~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~ 654 (782)
...+.++|++.+.||+|+||.||+|.. .+++.||||++..........+.+.+|++++++++||||+++++++.+.+..
T Consensus 17 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 96 (287)
T 2wei_A 17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF 96 (287)
T ss_dssp THHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred HHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeE
Confidence 455678999999999999999999965 4789999999977655455678899999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCC---CcEEEEee
Q 003982 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD---MRAKVADF 731 (782)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~---~~~kL~Df 731 (782)
++||||+++++|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.+ +.+||+||
T Consensus 97 ~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Df 168 (287)
T 2wei_A 97 YIVGELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDF 168 (287)
T ss_dssp EEEECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECST
T ss_pred EEEEEccCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEecc
Confidence 9999999999999988653 358999999999999999999999 899999999999999754 47999999
Q ss_pred ccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 732 GLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 732 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|++........ .....||+.|+|||++.+. ++.++|+||+|++
T Consensus 169 g~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~----~~~~~Di~slG~~ 211 (287)
T 2wei_A 169 GLSTCFQQNTK--MKDRIGTAYYIAPEVLRGT----YDEKCDVWSAGVI 211 (287)
T ss_dssp TGGGTBCCCSS--CSCHHHHHTTCCHHHHTTC----CCTHHHHHHHHHH
T ss_pred CcceeecCCCc--cccccCcccccChHHhcCC----CCCchhhHhHHHH
Confidence 99986654331 1234589999999998775 3568999999986
No 255
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.96 E-value=7.2e-30 Score=277.80 Aligned_cols=187 Identities=13% Similarity=0.095 Sum_probs=140.2
Q ss_pred cCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCC-hhhHHHHHHHHHHHHhc--CCCCcceEE-------eEEE
Q 003982 581 DNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKV--RHRHLVALL-------GYCI 649 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l--~h~nI~~~~-------~~~~ 649 (782)
.+|.+.+.||+|+||.||+|.. .+++.||||++...... ....+.+++|+++++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 4588999999999999999965 57899999999876542 34556778886555555 699988865 4444
Q ss_pred eC-----------------CeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHH------HHHHHHHHHHHHHHhhcCCC
Q 003982 650 NG-----------------SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQR------VTIALDVARGVEYLHSLAQQ 706 (782)
Q Consensus 650 ~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~------~~i~~qi~~aL~~LH~~~~~ 706 (782)
.+ ...|+||||++ |+|.+++..... .+++..+ ..++.|++.||+|||+ .
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~ 213 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF----VYVFRGDEGILALHILTAQLIRLAANLQS---K 213 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHHHHH---T
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc----ccchhhhhhhhhHHHHHHHHHHHHHHHHH---C
Confidence 33 23799999998 899999987532 2344455 6788999999999999 8
Q ss_pred CeEEcCCCCCCEEECCCCcEEEEeeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 707 SFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 707 ~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
||+||||||+|||++.++.+||+|||+|+...... ....+|+.|+|||++.+. ...++.++||||+||+
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~-~~~~~~~~DiwSlG~i 282 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG----PASSVPVTYAPREFLNAS-TATFTHALNAWQLGLS 282 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTCEE----EGGGSCGGGCCHHHHTCS-EEECCHHHHHHHHHHH
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCCCc----cCccCCcCCcChhhccCC-CCCcCccccHHHHHHH
Confidence 99999999999999999999999999998765321 134577999999998751 0145789999999986
No 256
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.96 E-value=8.8e-30 Score=276.36 Aligned_cols=190 Identities=17% Similarity=0.238 Sum_probs=152.2
Q ss_pred hcCCCccceeecccceEEEEEEeCC------CcEEEEEEeccccCChh---------hHHHHHHHHHHHHhcCCCCcceE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELPD------GTKIAVKRMESNTMGNK---------GLSEFQAEIAVLTKVRHRHLVAL 644 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~---------~~~~~~~E~~~l~~l~h~nI~~~ 644 (782)
.++|++.+.||+|+||.||+|.... ++.||||++........ ....+.+|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4689999999999999999996644 47899999875431100 01123456667778889999999
Q ss_pred EeEEEeC----CeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEE
Q 003982 645 LGYCING----SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI 720 (782)
Q Consensus 645 ~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll 720 (782)
++++... ...++||||+ +++|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+|||+
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~----~~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill 185 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN----AKRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLL 185 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEE
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEE
Confidence 9998775 4579999999 99999999762 2458999999999999999999999 899999999999999
Q ss_pred C--CCCcEEEEeeccceecCCCCce------eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 721 G--DDMRAKVADFGLVKNAPDGKYS------VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 721 ~--~~~~~kL~DfG~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+ .++.+||+|||+|+........ ......||+.|+|||++.+. .++.++||||+||+
T Consensus 186 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~~ 250 (364)
T 3op5_A 186 NYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGV---APSRRGDLEILGYC 250 (364)
T ss_dssp ESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTC---CCCHHHHHHHHHHH
T ss_pred ecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCC---CCCchhhHHHHHHH
Confidence 8 8899999999999876543211 11234599999999998875 35789999999986
No 257
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=4.1e-30 Score=279.06 Aligned_cols=189 Identities=30% Similarity=0.496 Sum_probs=146.9
Q ss_pred cCCCccceeecccceEEEEEEeC--CC--cEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEe-CCeEE
Q 003982 581 DNFSEANILGRGGFGVVYGGELP--DG--TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN-GSERL 655 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~-~~~~~ 655 (782)
..|++.+.||+|+||.||+|... ++ ..||||.++... .....+++.+|++++++++||||+++++++.+ ++..+
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~ 167 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 167 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS-CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeE
Confidence 34777899999999999999643 22 368999986532 34566889999999999999999999998754 45789
Q ss_pred EEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccce
Q 003982 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (782)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~ 735 (782)
+||||+++|+|.+++... ...+++.++..++.|+++||+|||+ .||+||||||+||+++.++.+||+|||+++
T Consensus 168 lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~ 240 (373)
T 3c1x_A 168 VVLPYMKHGDLRNFIRNE----THNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLAR 240 (373)
T ss_dssp EEEECCTTCBHHHHHHCT----TCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred EEEECCCCCCHHHHHhhc----ccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeeccccc
Confidence 999999999999999652 2457899999999999999999999 899999999999999999999999999998
Q ss_pred ecCCCCce---eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 736 NAPDGKYS---VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 736 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
........ ......+|+.|+|||++.+. .++.++||||+|++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwSlG~i 285 (373)
T 3c1x_A 241 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQ---KFTTKSDVWSFGVL 285 (373)
T ss_dssp -----------------CCGGGSCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred cccccccccccccCCCCCcccccChHHhcCC---CCCcHHHHHHHHHH
Confidence 76443221 12334578899999988754 45789999999986
No 258
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.96 E-value=6.6e-30 Score=269.88 Aligned_cols=192 Identities=26% Similarity=0.406 Sum_probs=155.6
Q ss_pred HhcCCCccceeecccceEEEEEEeC-CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
..++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC--HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 3578999999999999999999664 68999999987653 34567899999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
|||+++++|.+++.... ..+++.++..++.|++.||.|||+ .||+||||||+||+++.++.+||+|||++...
T Consensus 95 ~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 167 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLELD----RGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKN 167 (302)
T ss_dssp EECCTTEEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHH
T ss_pred EEeCCCCcHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCccc
Confidence 99999999999886632 358999999999999999999999 89999999999999999999999999987543
Q ss_pred CCCCceeeecccccccccCccccccc--hhhhHHHHHHHHHhccc
Q 003982 738 PDGKYSVETRLAGTFGYLAPEYAGKH--WMILCQMTGLIWLHGSV 780 (782)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~~~dvws~Gvv 780 (782)
.... .......||+.|+|||++... -...++.++||||+|++
T Consensus 168 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~i 211 (302)
T 2j7t_A 168 LKTL-QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGIT 211 (302)
T ss_dssp HHHH-HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHH
T ss_pred cccc-cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHH
Confidence 2111 111234689999999987421 01235678999999986
No 259
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.96 E-value=9.2e-30 Score=294.60 Aligned_cols=182 Identities=26% Similarity=0.394 Sum_probs=151.3
Q ss_pred ceeecccceEEEEEEe---CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEEEccCC
Q 003982 587 NILGRGGFGVVYGGEL---PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYEYMPR 663 (782)
Q Consensus 587 ~~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~~ 663 (782)
+.||+|+||.||+|.+ ..++.||||+++.........+++.+|++++++++||||+++++++.+ +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 5799999999999944 346789999998765555567889999999999999999999999864 568999999999
Q ss_pred CCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecCCCCc-
Q 003982 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKY- 742 (782)
Q Consensus 664 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~~~~~- 742 (782)
|+|.+++.. ...+++.++..++.|++.||+|||+ .||+||||||+|||++.++.+||+|||+|+.......
T Consensus 454 g~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 454 GPLNKYLQQ-----NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp EEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred CCHHHHHhh-----CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 999999965 3458999999999999999999999 8999999999999999999999999999987654331
Q ss_pred -eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 743 -SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 743 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.......+|+.|+|||++.+. .++.++||||+||+
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~---~~~~~sDvwSlGv~ 561 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYY---KFSSKSDVWSFGVL 561 (635)
T ss_dssp ---------CGGGSCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred cccccCCCCceeeeChhhhcCC---CCCcHHHHHHHHHH
Confidence 222334568899999998654 45789999999986
No 260
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.96 E-value=3.4e-30 Score=272.10 Aligned_cols=196 Identities=27% Similarity=0.417 Sum_probs=144.8
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
..++|++.+.||+|+||.||+|.. .+++.||||++..... ....+++.+|++++++++||||+++++++...+..++|
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc-chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 357899999999999999999964 4789999999865432 23456788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccC---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccc
Q 003982 658 YEYMPRGTLAQHLFEWHDH---GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV 734 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a 734 (782)
|||+++++|.+++...... ....+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccch
Confidence 9999999999998764322 23458999999999999999999999 89999999999999999999999999998
Q ss_pred eecCCCCc----eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 735 KNAPDGKY----SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 735 ~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
........ .......||+.|+|||++.+. ..++.++||||+|++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~i 216 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQV--RGYDFKADIWSFGIT 216 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHH--HCCCTHHHHHHHHHH
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccc--cCCCchhhHHHHHHH
Confidence 76643221 112335689999999987652 134678999999986
No 261
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.96 E-value=3e-29 Score=265.26 Aligned_cols=194 Identities=22% Similarity=0.340 Sum_probs=156.9
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCC--hhhHHHHHHHHHHHHhcCCCCcceEEeEEE--eCCe
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG--NKGLSEFQAEIAVLTKVRHRHLVALLGYCI--NGSE 653 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~--~~~~ 653 (782)
..++|++.+.||+|+||.||+|.. .+++.||+|++...... ....+.+.+|++++++++||||+++++++. +...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 457899999999999999999965 56889999999764321 234578999999999999999999999984 4457
Q ss_pred EEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeecc
Q 003982 654 RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGL 733 (782)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~ 733 (782)
.++||||++++ +.+++.... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~ 155 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVP---EKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGV 155 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHST---TCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEEehhccCC-HHHHHHhCc---ccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeecccc
Confidence 89999999876 777776532 3468999999999999999999999 8999999999999999999999999999
Q ss_pred ceecCCCCc-eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 734 VKNAPDGKY-SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 734 a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+........ .......||+.|+|||++.+. ......++||||+|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Di~slG~i 202 (305)
T 2wtk_C 156 AEALHPFAADDTCRTSQGSPAFQPPEIANGL-DTFSGFKVDIWSAGVT 202 (305)
T ss_dssp CEECCTTCSSCEECCCCSCGGGCCHHHHTCC-SCEESHHHHHHHHHHH
T ss_pred ccccCccccccccccCCCCCCCcChhhccCc-ccCCcchhhHHHHHHH
Confidence 987654221 222345689999999988653 1123678999999986
No 262
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.96 E-value=1.6e-29 Score=271.32 Aligned_cols=193 Identities=26% Similarity=0.352 Sum_probs=145.3
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcC-CCCcceEEeEEE--------
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGYCI-------- 649 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nI~~~~~~~~-------- 649 (782)
..+|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+++++++. ||||+++++++.
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 104 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE--EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT 104 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS--HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc--hHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence 35789999999999999999964 578999999986543 455678899999999996 999999999984
Q ss_pred eCCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eEEcCCCCCCEEECCCCcEE
Q 003982 650 NGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQS--FIHRDLKPSNILIGDDMRAK 727 (782)
Q Consensus 650 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~--ivHrDikp~NIll~~~~~~k 727 (782)
.....++||||++ |+|.+++...... ..+++.+++.++.|++.||+|||+ .| |+||||||+||+++.++.+|
T Consensus 105 ~~~~~~lv~e~~~-g~L~~~l~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~k 178 (337)
T 3ll6_A 105 GQAEFLLLTELCK-GQLVEFLKKMESR--GPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIK 178 (337)
T ss_dssp SSEEEEEEEECCS-EEHHHHHHHHHTT--CSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEE
T ss_pred CCceEEEEEEecC-CCHHHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEE
Confidence 3345799999995 7999998764432 468999999999999999999998 78 99999999999999999999
Q ss_pred EEeeccceecCCCCce-----------eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 728 VADFGLVKNAPDGKYS-----------VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 728 L~DfG~a~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|+|||+++........ ......||+.|+|||++...-...++.++||||+|++
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~i 242 (337)
T 3ll6_A 179 LCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCI 242 (337)
T ss_dssp BCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHH
T ss_pred EecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHH
Confidence 9999999876543211 1113458999999999843222345779999999986
No 263
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.96 E-value=8.3e-30 Score=272.12 Aligned_cols=189 Identities=27% Similarity=0.469 Sum_probs=150.3
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcE----EEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTK----IAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER 654 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~ 654 (782)
.++|++.+.||+|+||.||+|.. .+++. ||+|.+.... .....+.+.+|++++++++||||+++++++.++. .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~ 91 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS-SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-E
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-c
Confidence 36799999999999999999964 44554 5777765432 2446788999999999999999999999998754 7
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccc
Q 003982 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV 734 (782)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a 734 (782)
++|+||+++|+|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++
T Consensus 92 ~~v~~~~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a 164 (327)
T 3lzb_A 92 QLITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLA 164 (327)
T ss_dssp EEEECCCSSCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC-
T ss_pred eEEEEecCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcce
Confidence 8999999999999999763 2358999999999999999999999 89999999999999999999999999999
Q ss_pred eecCCCCce-eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 735 KNAPDGKYS-VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 735 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+........ ......+|+.|+|||++.+. .++.++||||+|++
T Consensus 165 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~i 208 (327)
T 3lzb_A 165 KLLGAEEKEYHAEGGKVPIKWMALESILHR---IYTHQSDVWSYGVT 208 (327)
T ss_dssp ---------------CCCGGGSCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred eEccCccccccccCCCccccccCHHHHcCC---CCChHHHHHHHHHH
Confidence 876543221 12234568899999988764 45778999999986
No 264
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=2e-29 Score=265.66 Aligned_cols=188 Identities=28% Similarity=0.444 Sum_probs=156.3
Q ss_pred CCCccceeecccceEEEEEEeC-CC---cEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeE-EE
Q 003982 582 NFSEANILGRGGFGVVYGGELP-DG---TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER-LL 656 (782)
Q Consensus 582 ~y~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~-~l 656 (782)
.|...+.||+|+||.||+|... ++ ..||+|++.... .....+.+.+|++++++++||||+++++++.+.+.. ++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 100 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT-EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV 100 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc-cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence 4566799999999999999642 22 379999987533 344567899999999999999999999999876665 99
Q ss_pred EEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeecccee
Q 003982 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (782)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~ 736 (782)
||||+.+++|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||+++.
T Consensus 101 v~e~~~~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 173 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRSP----QRNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARD 173 (298)
T ss_dssp EECCCTTCBHHHHHHCT----TCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred EEecccCCCHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCccc
Confidence 99999999999998652 3458999999999999999999999 8999999999999999999999999999986
Q ss_pred cCCCCc---eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 737 APDGKY---SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 737 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
...... .......+|+.|+|||.+.+. .++.++||||+|++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 217 (298)
T 3pls_A 174 ILDREYYSVQQHRHARLPVKWTALESLQTY---RFTTKSDVWSFGVL 217 (298)
T ss_dssp TTTGGGGCSCCSSCTTCGGGGSCHHHHTTC---CCCHHHHHHHHHHH
T ss_pred ccCCcccccccCcCCCCCccccChhhhccC---CCChhhchhhHHHH
Confidence 644321 112234678999999998764 45778999999986
No 265
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.96 E-value=9e-30 Score=276.89 Aligned_cols=184 Identities=25% Similarity=0.404 Sum_probs=154.3
Q ss_pred hcCCCccceeecccceEEEEEE-eCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeE----
Q 003982 580 TDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER---- 654 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~---- 654 (782)
.++|.+.+.||+|+||.||+|. ..+++.||||++..........+.+.+|+++++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 5789999999999999999995 45789999999987655555678899999999999999999999999877654
Q ss_pred --EEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeec
Q 003982 655 --LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG 732 (782)
Q Consensus 655 --~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG 732 (782)
++||||++ ++|.+.+. ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||
T Consensus 121 ~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg 189 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG-------MEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFG 189 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT-------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred eEEEEEcccc-ccHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEecC
Confidence 99999996 68877762 348999999999999999999999 899999999999999999999999999
Q ss_pred cceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 733 LVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 733 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+++..... .....||+.|+|||++.+. ..++.++||||+|++
T Consensus 190 ~a~~~~~~----~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~i 231 (371)
T 4exu_A 190 LARHADAE----MTGYVVTRWYRAPEVILSW--MHYNQTVDIWSVGCI 231 (371)
T ss_dssp CC------------CTTCCCTTSCHHHHSCC--SCCCTTHHHHHHHHH
T ss_pred cccccccC----cCCcccCccccCHHHhcCC--CCCCcHHhHHHHHHH
Confidence 99865432 2345789999999988763 134668999999986
No 266
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.96 E-value=2.5e-29 Score=271.66 Aligned_cols=189 Identities=26% Similarity=0.393 Sum_probs=156.1
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeC-----C
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING-----S 652 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~-----~ 652 (782)
+.++|++.+.||+|+||.||+|.. .+++.||||++.... .......+.+|++++++++||||+++++++... .
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD-KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc-cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 346899999999999999999965 478999999996533 234567788999999999999999999988754 6
Q ss_pred eEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeec
Q 003982 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG 732 (782)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG 732 (782)
..++||||++ ++|.+++.. ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg 157 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVIST------QMLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFG 157 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCT
T ss_pred eEEEEEeccC-ccHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEecc
Confidence 7899999996 689988865 358999999999999999999999 899999999999999999999999999
Q ss_pred cceecCCCCce---------eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 733 LVKNAPDGKYS---------VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 733 ~a~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+++........ ......||+.|+|||++.+. ..++.++||||+|++
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~Di~slG~i 212 (353)
T 2b9h_A 158 LARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTS--AKYSRAMDVWSCGCI 212 (353)
T ss_dssp TCEECC----------------CCCCCCGGGCCHHHHHSC--CCCCHHHHHHHHHHH
T ss_pred cccccccccccccCccccccchhhccccccccCCeeeccC--CCccchhhHHHHHHH
Confidence 99876542211 11234689999999986542 135778999999986
No 267
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.96 E-value=5.4e-30 Score=275.90 Aligned_cols=189 Identities=16% Similarity=0.198 Sum_probs=150.4
Q ss_pred hcCCCccceeecccceEEEEEEeC----CCcEEEEEEeccccCCh---------hhHHHHHHHHHHHHhcCCCCcceEEe
Q 003982 580 TDNFSEANILGRGGFGVVYGGELP----DGTKIAVKRMESNTMGN---------KGLSEFQAEIAVLTKVRHRHLVALLG 646 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~---------~~~~~~~~E~~~l~~l~h~nI~~~~~ 646 (782)
.++|++.+.||+|+||.||+|... ++..||||++....... .....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 367999999999999999999664 57889999987653210 01234668889999999999999999
Q ss_pred EEEe----CCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECC
Q 003982 647 YCIN----GSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722 (782)
Q Consensus 647 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~ 722 (782)
++.+ ....++||||+ +++|.+++... ..+++.+++.++.|++.||+|||+ .||+||||||+||+++.
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~ 186 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQN-----GTFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGY 186 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGG-----GBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEES
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEcc
Confidence 9988 77889999999 99999998653 268999999999999999999999 89999999999999988
Q ss_pred CC--cEEEEeeccceecCCCCce------eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 723 DM--RAKVADFGLVKNAPDGKYS------VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 723 ~~--~~kL~DfG~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
++ .+||+|||+|+........ ......||+.|+|||++.+. .++.++||||+||+
T Consensus 187 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~i 249 (345)
T 2v62_A 187 KNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGV---ALSRRSDVEILGYC 249 (345)
T ss_dssp SSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTC---CCCHHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCC---CCCchhhHHHHHHH
Confidence 77 9999999999876432211 11335799999999998765 35789999999986
No 268
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.96 E-value=2.5e-29 Score=264.55 Aligned_cols=188 Identities=23% Similarity=0.347 Sum_probs=152.0
Q ss_pred HHhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEE-EeCCeEE
Q 003982 578 QVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYC-INGSERL 655 (782)
Q Consensus 578 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~-~~~~~~~ 655 (782)
.+.++|++.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|++++++++|++++..+.++ .+....+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT----KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc----cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceE
Confidence 4567899999999999999999964 678999999876543 224588899999999987766665554 6778889
Q ss_pred EEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEE---CCCCcEEEEeec
Q 003982 656 LVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI---GDDMRAKVADFG 732 (782)
Q Consensus 656 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll---~~~~~~kL~DfG 732 (782)
+||||+ +++|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||++ +.++.+||+|||
T Consensus 82 lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg 153 (296)
T 4hgt_A 82 MVMELL-GPSLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFG 153 (296)
T ss_dssp EEEECC-CCBHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCT
T ss_pred EEEEcc-CCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCc
Confidence 999999 99999998753 2358999999999999999999999 899999999999999 788999999999
Q ss_pred cceecCCCCc------eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 733 LVKNAPDGKY------SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 733 ~a~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+++....... .......||+.|+|||++.+. .++.++||||+||+
T Consensus 154 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~i 204 (296)
T 4hgt_A 154 LAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGI---EQSRRDDLESLGYV 204 (296)
T ss_dssp TCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTC---CCCHHHHHHHHHHH
T ss_pred cceeccCcccCccCCCCcccccCCCccccchHHhcCC---CCCchhHHHHHHHH
Confidence 9987654332 122345789999999998775 35788999999986
No 269
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.96 E-value=9.4e-30 Score=280.27 Aligned_cols=192 Identities=26% Similarity=0.377 Sum_probs=143.2
Q ss_pred HhcCCCc-cceeecccceEEEEEEeC---CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEe--CC
Q 003982 579 VTDNFSE-ANILGRGGFGVVYGGELP---DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN--GS 652 (782)
Q Consensus 579 ~~~~y~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~--~~ 652 (782)
+.+.|++ .++||+|+||.||+|... +++.||||++..... ...+.+|++++++++||||+++++++.. ..
T Consensus 18 ~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 93 (405)
T 3rgf_A 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHADR 93 (405)
T ss_dssp HHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTT
T ss_pred hhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCC
Confidence 3455666 568999999999999754 578999999975432 3568899999999999999999999965 67
Q ss_pred eEEEEEEccCCCCHHHHHHhhccC----CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEE----CCCC
Q 003982 653 ERLLVYEYMPRGTLAQHLFEWHDH----GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI----GDDM 724 (782)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll----~~~~ 724 (782)
..++||||++ ++|.+++...... ....+++.+++.++.|++.||+|||+ .||+||||||+|||+ +.++
T Consensus 94 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~ 169 (405)
T 3rgf_A 94 KVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERG 169 (405)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTT
T ss_pred eEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCC
Confidence 8899999996 5888887643321 12358999999999999999999999 899999999999999 6778
Q ss_pred cEEEEeeccceecCCCCc--eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 725 RAKVADFGLVKNAPDGKY--SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 725 ~~kL~DfG~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.+||+|||+|+....... ......+||+.|+|||++.+. ..++.++||||+||+
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwSlG~i 225 (405)
T 3rgf_A 170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGA--RHYTKAIDIWAIGCI 225 (405)
T ss_dssp CEEECCTTCCC----------------CCCTTCCHHHHTTC--CSCCHHHHHHHHHHH
T ss_pred cEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCC--CcccchhhhHHHHHH
Confidence 999999999987654321 222345799999999988763 125778999999986
No 270
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.1e-28 Score=263.12 Aligned_cols=230 Identities=17% Similarity=0.230 Sum_probs=173.5
Q ss_pred CCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEE
Q 003982 113 TSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNL 192 (782)
Q Consensus 113 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 192 (782)
.++++|+|++|+++.+|.. +.++++|++|+|++|++.. +|..+.++++|++|+|++|+++ .+|..+..+++|++|
T Consensus 81 ~~l~~L~L~~n~l~~lp~~-l~~l~~L~~L~L~~n~l~~---lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 81 PGRVALELRSVPLPQFPDQ-AFRLSHLQHMTIDAAGLME---LPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TTCCEEEEESSCCSSCCSC-GGGGTTCSEEEEESSCCCC---CCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cceeEEEccCCCchhcChh-hhhCCCCCEEECCCCCccc---hhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 4566666666666655554 3346666666666666553 5666667777777777777776 446677777777777
Q ss_pred EcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccccCCCCCCCCCCCCCEEEcCCCcCcc
Q 003982 193 RLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTG 272 (782)
Q Consensus 193 ~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~ 272 (782)
+|++|++.+.+|.. +... . ....+..+++|++|+|++|+|+
T Consensus 156 ~L~~n~~~~~~p~~------------------------------~~~~-----~---~~~~~~~l~~L~~L~L~~n~l~- 196 (328)
T 4fcg_A 156 SIRACPELTELPEP------------------------------LAST-----D---ASGEHQGLVNLQSLRLEWTGIR- 196 (328)
T ss_dssp EEEEETTCCCCCSC------------------------------SEEE-----C----CCCEEESTTCCEEEEEEECCC-
T ss_pred ECCCCCCccccChh------------------------------Hhhc-----c---chhhhccCCCCCEEECcCCCcC-
Confidence 77777766666532 1111 1 1123567999999999999999
Q ss_pred CcchhhcCCCCCCEEEccCCcccCCCCCCCCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCC
Q 003982 273 VVPASVISLPALLNISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEG 352 (782)
Q Consensus 273 ~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (782)
.+|..+..+++|++|++++|++++.
T Consensus 197 ~lp~~l~~l~~L~~L~L~~N~l~~l------------------------------------------------------- 221 (328)
T 4fcg_A 197 SLPASIANLQNLKSLKIRNSPLSAL------------------------------------------------------- 221 (328)
T ss_dssp CCCGGGGGCTTCCEEEEESSCCCCC-------------------------------------------------------
T ss_pred cchHhhcCCCCCCEEEccCCCCCcC-------------------------------------------------------
Confidence 8899999999999999999998842
Q ss_pred CCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcCCCCCC
Q 003982 353 NNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVP 432 (782)
Q Consensus 353 ~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p 432 (782)
|..+..+++|++|+|++|.+.+.+|..|+++++|++|+|++|++.+.+|..+..+++|+.|+|++|++.|.+|
T Consensus 222 -------~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP 294 (328)
T 4fcg_A 222 -------GPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLP 294 (328)
T ss_dssp -------CGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCC
T ss_pred -------chhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhcc
Confidence 3345667899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC---CCcceecCCCCCC
Q 003982 433 DFG---SNVKFTVSPGNPF 448 (782)
Q Consensus 433 ~~~---~~~~~~~~~~n~~ 448 (782)
... ..+....++.|..
T Consensus 295 ~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 295 SLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp GGGGGSCTTCEEECCGGGS
T ss_pred HHHhhccCceEEeCCHHHH
Confidence 532 3344445554443
No 271
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.96 E-value=1.7e-29 Score=269.98 Aligned_cols=194 Identities=26% Similarity=0.433 Sum_probs=156.9
Q ss_pred hcCCCccceeecccceEEEEEEe------CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCe
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL------PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE 653 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~ 653 (782)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ......++.+|+.++++++||||+++++++.+...
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc-chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 46899999999999999999963 357789999996432 34456789999999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHHHhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECC---CCcEEE
Q 003982 654 RLLVYEYMPRGTLAQHLFEWHDH--GYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD---DMRAKV 728 (782)
Q Consensus 654 ~~lv~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~---~~~~kL 728 (782)
.++||||+++++|.+++...... ....+++.+++.++.|++.||.|||+ .||+||||||+||+++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceEEE
Confidence 99999999999999999874322 12358999999999999999999999 89999999999999984 446999
Q ss_pred EeeccceecCCCCc-eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 729 ADFGLVKNAPDGKY-SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 729 ~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+|||++........ .......||+.|+|||++.+. .++.++||||+|++
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 234 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEG---IFTSKTDTWSFGVL 234 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCC---CCCchhhHHHHHHH
Confidence 99999975533222 222334679999999988654 35778999999986
No 272
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.96 E-value=1.9e-29 Score=269.36 Aligned_cols=190 Identities=26% Similarity=0.382 Sum_probs=156.8
Q ss_pred HhcCCCccceeecccceEEEEEEe--CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhc---CCCCcceEEeEEE----
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL--PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV---RHRHLVALLGYCI---- 649 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~nI~~~~~~~~---- 649 (782)
..++|++.+.||+|+||.||+|.. .+++.||+|++............+.+|+++++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999976 4688999999976543333334566777777766 8999999999987
Q ss_pred -eCCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEE
Q 003982 650 -NGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKV 728 (782)
Q Consensus 650 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL 728 (782)
.....++||||++ |+|.+++.... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl 161 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVP---EPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKL 161 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSC---TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEE
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEE
Confidence 4567899999997 69999987632 2348999999999999999999999 89999999999999999999999
Q ss_pred EeeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 729 ADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 729 ~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+|||+++...... ......||+.|+|||++.+. .++.++||||+|++
T Consensus 162 ~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 208 (326)
T 1blx_A 162 ADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQS---SYATPVDLWSVGCI 208 (326)
T ss_dssp CSCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTC---CCCTHHHHHHHHHH
T ss_pred ecCcccccccCCC--CccccccccceeCHHHHhcC---CCCcchhHHHHHHH
Confidence 9999997664322 22335689999999988764 35678999999986
No 273
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.96 E-value=1.3e-29 Score=273.38 Aligned_cols=193 Identities=23% Similarity=0.381 Sum_probs=161.7
Q ss_pred hcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChh---------------hHHHHHHHHHHHHhcCCCCcceE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNK---------------GLSEFQAEIAVLTKVRHRHLVAL 644 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~---------------~~~~~~~E~~~l~~l~h~nI~~~ 644 (782)
.++|++.+.||+|+||.||+|.. +++.||||++........ ..+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999988 999999999976432211 12789999999999999999999
Q ss_pred EeEEEeCCeEEEEEEccCCCCHHHHHHhh---ccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEEC
Q 003982 645 LGYCINGSERLLVYEYMPRGTLAQHLFEW---HDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG 721 (782)
Q Consensus 645 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~---~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~ 721 (782)
++++.+.+..++||||+++++|.+++... .......+++.++..++.|++.||+|||+ ..||+||||||+||+++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Nil~~ 186 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMD 186 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGEEEC
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhEEEc
Confidence 99999999999999999999999883211 11113568999999999999999999996 37999999999999999
Q ss_pred CCCcEEEEeeccceecCCCCceeeecccccccccCccccccchhhhHH-HHHHHHHhccc
Q 003982 722 DDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQ-MTGLIWLHGSV 780 (782)
Q Consensus 722 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~-~~~dvws~Gvv 780 (782)
.++.+||+|||.+...... ......||+.|+|||++.+.. .+. .++||||+|++
T Consensus 187 ~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~--~~~~~~~Di~slG~i 241 (348)
T 2pml_X 187 KNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNES--SYNGAKVDIWSLGIC 241 (348)
T ss_dssp TTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCC--CEEHHHHHHHHHHHH
T ss_pred CCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCC--CCCcchhhHHHHHHH
Confidence 9999999999999876543 223457899999999987651 223 48999999986
No 274
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.96 E-value=2.8e-29 Score=268.13 Aligned_cols=193 Identities=25% Similarity=0.387 Sum_probs=154.2
Q ss_pred HHhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhc-CCCCcceEEeEEEe-----
Q 003982 578 QVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCIN----- 650 (782)
Q Consensus 578 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~----- 650 (782)
...++|++.+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+++++++ +||||+++++++..
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 97 (326)
T 2x7f_A 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 97 (326)
T ss_dssp CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--C
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc---ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcc
Confidence 3467899999999999999999965 578999999997543 3346789999999999 79999999999987
Q ss_pred -CCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEE
Q 003982 651 -GSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVA 729 (782)
Q Consensus 651 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~ 729 (782)
....++||||+++++|.+++.... ...+++..+..++.|++.||.|||+ .||+||||||+||+++.++.+||+
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~kl~ 171 (326)
T 2x7f_A 98 MDDQLWLVMEFCGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLV 171 (326)
T ss_dssp CCCEEEEEEECCTTEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEEC
T ss_pred ccceEEEEEEcCCCCcHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCEEEe
Confidence 467899999999999999997642 2358999999999999999999999 899999999999999999999999
Q ss_pred eeccceecCCCCceeeecccccccccCccccccch--hhhHHHHHHHHHhccc
Q 003982 730 DFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHW--MILCQMTGLIWLHGSV 780 (782)
Q Consensus 730 DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~~~dvws~Gvv 780 (782)
|||++........ ......||+.|+|||++.... ...++.++||||+|++
T Consensus 172 Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~i 223 (326)
T 2x7f_A 172 DFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGIT 223 (326)
T ss_dssp CCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHH
T ss_pred eCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHH
Confidence 9999987653221 223346899999999876321 1234667899999986
No 275
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.96 E-value=1.1e-29 Score=264.77 Aligned_cols=183 Identities=32% Similarity=0.520 Sum_probs=149.5
Q ss_pred hcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeC-CeEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCING-SERLLVY 658 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~-~~~~lv~ 658 (782)
.++|++.+.||+|+||.||+|.. +++.||||+++... ..+.+.+|++++++++||||+++++++.+. +..++||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 46799999999999999999987 58899999997532 457899999999999999999999997654 4789999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecC
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~ 738 (782)
||+++++|.+++..... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++....
T Consensus 95 e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 168 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168 (278)
T ss_dssp CCCTTEEHHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred ecCCCCCHHHHHHhccc---ccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeecccccccc
Confidence 99999999999976422 237889999999999999999999 899999999999999999999999999987654
Q ss_pred CCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 739 DGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
... ....+++.|+|||++.+. .++.++|+||+|++
T Consensus 169 ~~~----~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 203 (278)
T 1byg_A 169 STQ----DTGKLPVKWTAPEALREK---KFSTKSDVWSFGIL 203 (278)
T ss_dssp -----------CCTTTSCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred ccc----cCCCccccccCHHHhCCC---CCCchhcHHHHHHH
Confidence 322 123578899999988654 45778999999986
No 276
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.96 E-value=5.7e-29 Score=267.10 Aligned_cols=184 Identities=25% Similarity=0.377 Sum_probs=157.7
Q ss_pred hcCCCccceeecccceEEEEEEe--CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCC------CcceEEeEEEeC
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL--PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHR------HLVALLGYCING 651 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~------nI~~~~~~~~~~ 651 (782)
.++|++.+.||+|+||.||+|.. .+++.||||+++.. ....+.+.+|+++++.++|+ +|+++++++.+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~ 89 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH 89 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC---CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence 46899999999999999999964 46889999999753 34567789999999998765 499999999999
Q ss_pred CeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECC---------
Q 003982 652 SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD--------- 722 (782)
Q Consensus 652 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~--------- 722 (782)
+..++||||+ +++|.+++.... ..++++.++..++.|++.||+|||+ .||+||||||+||+++.
T Consensus 90 ~~~~lv~e~~-~~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~ 162 (339)
T 1z57_A 90 GHICIVFELL-GLSTYDFIKENG---FLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNP 162 (339)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC-
T ss_pred CcEEEEEcCC-CCCHHHHHHhcC---CCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCC
Confidence 9999999999 899999987632 2468999999999999999999999 89999999999999987
Q ss_pred ----------CCcEEEEeeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 723 ----------DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 723 ----------~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
++.+||+|||+++...... ....||+.|+|||++.+. .++.++||||+|++
T Consensus 163 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~i 223 (339)
T 1z57_A 163 KIKRDERTLINPDIKVVDFGSATYDDEHH----STLVSTRHYRAPEVILAL---GWSQPCDVWSIGCI 223 (339)
T ss_dssp ---CEEEEESCCCEEECCCSSCEETTSCC----CSSCSCGGGCCHHHHTTS---CCCTHHHHHHHHHH
T ss_pred ccccccccccCCCceEeeCcccccCcccc----ccccCCccccChHHhhCC---CCCcchhhHHHHHH
Confidence 6689999999998755422 235789999999998764 45778999999986
No 277
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.96 E-value=1.6e-29 Score=291.81 Aligned_cols=187 Identities=25% Similarity=0.386 Sum_probs=151.4
Q ss_pred CCCccc-eeecccceEEEEEEeC---CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 582 NFSEAN-ILGRGGFGVVYGGELP---DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 582 ~y~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
++.+.+ .||+|+||.||+|... ++..||||+++... .....+++.+|++++++++||||+++++++.+ +..++|
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv 413 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV 413 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC-SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEE
Confidence 344444 7999999999999553 45679999997653 23467889999999999999999999999876 568999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
|||+++|+|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+|||++.++.+||+|||+|+..
T Consensus 414 ~E~~~~g~L~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~ 486 (613)
T 2ozo_A 414 MEMAGGGPLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKAL 486 (613)
T ss_dssp EECCTTCBHHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTC
T ss_pred EEeCCCCcHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccc
Confidence 9999999999998642 3458999999999999999999999 89999999999999999999999999999876
Q ss_pred CCCCce--eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 738 PDGKYS--VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 738 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
...... ......+|+.|+|||++.+. .++.++|||||||+
T Consensus 487 ~~~~~~~~~~~~~~~~~~y~APE~~~~~---~~~~~sDvwSlGv~ 528 (613)
T 2ozo_A 487 GADDSYYTARSAGKWPLKWYAPECINFR---KFSSRSDVWSYGVT 528 (613)
T ss_dssp C--------------CCTTSCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred cCCCceeeeccCCCCccceeCHhhhcCC---CCCcHHHHHHHHHH
Confidence 543211 11223457899999998654 45779999999986
No 278
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.96 E-value=4.8e-29 Score=262.42 Aligned_cols=187 Identities=24% Similarity=0.335 Sum_probs=155.7
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeE-EEeCCeEEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGY-CINGSERLL 656 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~-~~~~~~~~l 656 (782)
..++|++.+.||+|+||.||+|.. .+++.||||++..... .+.+.+|++++++++|++++..+.+ ..+....++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence 357899999999999999999964 6889999999875432 2468899999999998876655554 466778899
Q ss_pred EEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEEC---CCCcEEEEeecc
Q 003982 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG---DDMRAKVADFGL 733 (782)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~---~~~~~kL~DfG~ 733 (782)
||||+ +++|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||+++ +++.+||+|||+
T Consensus 83 v~e~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 154 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 154 (296)
T ss_dssp EEECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTT
T ss_pred EEEec-CCCHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCC
Confidence 99999 99999999743 2358999999999999999999999 8999999999999994 788999999999
Q ss_pred ceecCCCCce------eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 734 VKNAPDGKYS------VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 734 a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+......... ......||+.|+|||++.+. .++.++||||+|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~i 204 (296)
T 3uzp_A 155 AKKYRDARTHQHIPYRENKNLTGTARYASINTHLGI---EQSRRDDLESLGYV 204 (296)
T ss_dssp CEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTC---CCCHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCChhhhcCC---CCCcchhhHHHHHH
Confidence 9876554321 12345799999999998775 35788999999986
No 279
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.96 E-value=2.7e-29 Score=276.07 Aligned_cols=184 Identities=26% Similarity=0.328 Sum_probs=155.0
Q ss_pred hcCCCccceeecccceEEEEEE-eCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcC--------CCCcceEEeEEE-
Q 003982 580 TDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR--------HRHLVALLGYCI- 649 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--------h~nI~~~~~~~~- 649 (782)
.++|++.+.||+|+||+||+|. ..+++.||||+++.. ....+.+.+|++++++++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~ 112 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI 112 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC---CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence 4789999999999999999995 457889999999753 345678899999999986 788999999987
Q ss_pred ---eCCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CeEEcCCCCCCEEECCCC-
Q 003982 650 ---NGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQ-SFIHRDLKPSNILIGDDM- 724 (782)
Q Consensus 650 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~-~ivHrDikp~NIll~~~~- 724 (782)
.....++||||+ ++++.+.+.... ...+++.++..++.|++.||+|||+ + ||+||||||+|||++.++
T Consensus 113 ~~~~~~~~~lv~e~~-~~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~~ 185 (397)
T 1wak_A 113 SGVNGTHICMVFEVL-GHHLLKWIIKSN---YQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNEQ 185 (397)
T ss_dssp EETTEEEEEEEECCC-CCBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCHH
T ss_pred cCCCCceEEEEEecc-CccHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccch
Confidence 456789999999 677777775522 2458999999999999999999998 7 999999999999999775
Q ss_pred ------------------------------------------------cEEEEeeccceecCCCCceeeecccccccccC
Q 003982 725 ------------------------------------------------RAKVADFGLVKNAPDGKYSVETRLAGTFGYLA 756 (782)
Q Consensus 725 ------------------------------------------------~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~a 756 (782)
.+||+|||+|+...... ....||+.|+|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~----~~~~gt~~y~a 261 (397)
T 1wak_A 186 YIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF----TEDIQTRQYRS 261 (397)
T ss_dssp HHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS----CSCCSCGGGCC
T ss_pred hhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC----ccCCCCCcccC
Confidence 79999999998765432 33478999999
Q ss_pred ccccccchhhhHHHHHHHHHhccc
Q 003982 757 PEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 757 PE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
||++.+. .++.++||||+||+
T Consensus 262 PE~~~~~---~~~~~~DiwslG~i 282 (397)
T 1wak_A 262 LEVLIGS---GYNTPADIWSTACM 282 (397)
T ss_dssp HHHHHTS---CCCTHHHHHHHHHH
T ss_pred ChhhcCC---CCCcHHHHHHHHHH
Confidence 9998765 35678999999986
No 280
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.96 E-value=2.7e-29 Score=272.19 Aligned_cols=195 Identities=25% Similarity=0.337 Sum_probs=148.1
Q ss_pred HHHHHHhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCC
Q 003982 574 EVLRQVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGS 652 (782)
Q Consensus 574 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~ 652 (782)
+......++|++.+.||+|+||.||+|.. .+++.||||++.... .....+.+|++.++.++||||+++++++...+
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~ 92 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP---RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLG 92 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT---TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEEC
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc---cccHHHHHHHHHHHhcCCCCcccHHHhhhccc
Confidence 34556678999999999999999999965 578999999986543 23346677888889999999999999997644
Q ss_pred e-------EEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHh--hcCCCCeEEcCCCCCCEEECC-
Q 003982 653 E-------RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLH--SLAQQSFIHRDLKPSNILIGD- 722 (782)
Q Consensus 653 ~-------~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH--~~~~~~ivHrDikp~NIll~~- 722 (782)
. .++||||+++ ++.+.+...... ...+++..+..++.|++.||.||| + .||+||||||+||+++.
T Consensus 93 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~ 167 (360)
T 3e3p_A 93 ERDRRDIYLNVVMEYVPD-TLHRCCRNYYRR-QVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEA 167 (360)
T ss_dssp SSCTTCEEEEEEEECCSC-BHHHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETT
T ss_pred cccccceeEEEEeecccc-cHHHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCC
Confidence 3 7899999975 666655543322 356899999999999999999999 6 89999999999999996
Q ss_pred CCcEEEEeeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 723 DMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 723 ~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
++.+||+|||+++....... .....||+.|+|||++.+. ..++.++||||+||+
T Consensus 168 ~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~--~~~~~~~Di~slG~i 221 (360)
T 3e3p_A 168 DGTLKLCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGN--QHYTTAVDIWSVGCI 221 (360)
T ss_dssp TTEEEECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTC--SSCCTHHHHHHHHHH
T ss_pred CCcEEEeeCCCceecCCCCC--cccccCCcceeCHHHHcCC--CCCCcHHHHHHHHHH
Confidence 89999999999987764332 2345789999999987653 125678999999986
No 281
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.96 E-value=8.9e-30 Score=275.05 Aligned_cols=184 Identities=14% Similarity=0.212 Sum_probs=153.7
Q ss_pred hcCCCccceeecccceEEEEEEeC---------CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcce-------
Q 003982 580 TDNFSEANILGRGGFGVVYGGELP---------DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVA------- 643 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~------- 643 (782)
.++|++.+.||+|+||.||+|... +++.||||++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~ 113 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYS 113 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence 367999999999999999999665 3789999998753 36889999999999999887
Q ss_pred --------EEeEEEe-CCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCC
Q 003982 644 --------LLGYCIN-GSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLK 714 (782)
Q Consensus 644 --------~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDik 714 (782)
+++++.. ....++||||+ +++|.+++.... ...+++.++..++.|++.||+|||+ .||+|||||
T Consensus 114 ~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dik 186 (352)
T 2jii_A 114 TPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP---KHVLSERSVLQVACRLLDALEFLHE---NEYVHGNVT 186 (352)
T ss_dssp CTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCC
T ss_pred CCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC---cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCC
Confidence 6777776 67889999999 999999997632 2458999999999999999999999 899999999
Q ss_pred CCCEEECCCC--cEEEEeeccceecCCCCce------eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 715 PSNILIGDDM--RAKVADFGLVKNAPDGKYS------VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 715 p~NIll~~~~--~~kL~DfG~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|+||+++.++ .+||+|||+++........ ......||+.|+|||++.+. .++.++||||+|++
T Consensus 187 p~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~i 257 (352)
T 2jii_A 187 AENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGC---GPSRRSDLQSLGYC 257 (352)
T ss_dssp GGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTC---CCCHHHHHHHHHHH
T ss_pred HHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccC---CCCchhhHHHHHHH
Confidence 9999999998 9999999999876532211 11334799999999998775 45789999999986
No 282
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.96 E-value=4.5e-29 Score=264.93 Aligned_cols=192 Identities=24% Similarity=0.320 Sum_probs=157.0
Q ss_pred HhcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcC--CCCcceEEeEEEeCCeEEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR--HRHLVALLGYCINGSERLL 656 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~nI~~~~~~~~~~~~~~l 656 (782)
..++|++.+.||+|+||.||+|...+++.||||++..........+.+.+|++++++++ ||||+++++++.+++..++
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 35679999999999999999998888999999999876555566788999999999997 5999999999999999999
Q ss_pred EEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeecccee
Q 003982 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (782)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~ 736 (782)
||| +.+++|.+++.. ...+++.++..++.|++.||+|||+ .||+||||||+||+++ ++.+||+|||+++.
T Consensus 106 v~e-~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~ 175 (313)
T 3cek_A 106 VME-CGNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQ 175 (313)
T ss_dssp EEC-CCSEEHHHHHHH-----CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCC
T ss_pred EEe-cCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEE-CCeEEEeecccccc
Confidence 999 558899999976 2468999999999999999999999 8999999999999996 48999999999987
Q ss_pred cCCCCce-eeecccccccccCccccccc--------hhhhHHHHHHHHHhccc
Q 003982 737 APDGKYS-VETRLAGTFGYLAPEYAGKH--------WMILCQMTGLIWLHGSV 780 (782)
Q Consensus 737 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~--------~~~~~~~~~dvws~Gvv 780 (782)
....... ......||+.|+|||++.+. ....++.++||||+|++
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~i 228 (313)
T 3cek_A 176 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCI 228 (313)
T ss_dssp --------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHH
T ss_pred ccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHH
Confidence 6543221 22345689999999987652 01235778999999986
No 283
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.96 E-value=1.5e-29 Score=269.45 Aligned_cols=193 Identities=26% Similarity=0.396 Sum_probs=160.8
Q ss_pred HHHHHhcCCCccceeecccceEEEEEE-eCCCcEEEEEEeccccCCh----hhHHHHHHHHHHHHhcC--CCCcceEEeE
Q 003982 575 VLRQVTDNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTMGN----KGLSEFQAEIAVLTKVR--HRHLVALLGY 647 (782)
Q Consensus 575 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~--h~nI~~~~~~ 647 (782)
......++|++.+.||+|+||.||+|. ..+++.||||++....... ...+.+.+|++++++++ ||||++++++
T Consensus 37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~ 116 (320)
T 3a99_A 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 116 (320)
T ss_dssp ---CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEE
T ss_pred ccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEE
Confidence 344467889999999999999999995 4678999999997654322 12356778999999996 5999999999
Q ss_pred EEeCCeEEEEEEccCC-CCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEEC-CCCc
Q 003982 648 CINGSERLLVYEYMPR-GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG-DDMR 725 (782)
Q Consensus 648 ~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~-~~~~ 725 (782)
+.+++..++||||+.+ ++|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||+++ +++.
T Consensus 117 ~~~~~~~~lv~e~~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~ 188 (320)
T 3a99_A 117 FERPDSFVLILERPEPVQDLFDFITER-----GALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGE 188 (320)
T ss_dssp EECSSEEEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTE
T ss_pred EecCCcEEEEEEcCCCCccHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCC
Confidence 9999999999999976 8999998762 458999999999999999999999 8999999999999999 7889
Q ss_pred EEEEeeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 726 AKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 726 ~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+||+|||+++....... ....||+.|+|||++.+. .....++||||+|++
T Consensus 189 ~kL~Dfg~~~~~~~~~~---~~~~gt~~y~aPE~~~~~--~~~~~~~Di~slG~i 238 (320)
T 3a99_A 189 LKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYH--RYHGRSAAVWSLGIL 238 (320)
T ss_dssp EEECCCTTCEECCSSCB---CCCCSCGGGSCHHHHHHS--CBCHHHHHHHHHHHH
T ss_pred EEEeeCccccccccccc---cCCCCCccCCChHHhccC--CCCCccchHHhHHHH
Confidence 99999999988765332 234689999999987653 123678999999986
No 284
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.96 E-value=3e-29 Score=263.27 Aligned_cols=190 Identities=28% Similarity=0.512 Sum_probs=149.0
Q ss_pred hcCCCccceeecccceEEEEEEe--CCCc--EEEEEEeccccCC-hhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL--PDGT--KIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER 654 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~--~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~ 654 (782)
.++|++.+.||+|+||+||+|.+ .+++ .||||+++..... ....+.+.+|++++++++||||+++++++.++. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 35789999999999999999964 2333 6899998765432 345678999999999999999999999988755 8
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccc
Q 003982 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV 734 (782)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a 734 (782)
++||||+++++|.+++.... ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~ 168 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLM 168 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG----GGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred eeeEecccCCCHHHHHHhcc----CCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEcccccc
Confidence 89999999999999997642 348999999999999999999999 89999999999999999999999999999
Q ss_pred eecCCCCce--eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 735 KNAPDGKYS--VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 735 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
......... ......+|+.|+|||++.+. .++.++||||+|++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~i 213 (291)
T 1u46_A 169 RALPQNDDHYVMQEHRKVPFAWCAPESLKTR---TFSHASDTWMFGVT 213 (291)
T ss_dssp EECCC-CCEEEC-----CCGGGCCHHHHHHC---EEEHHHHHHHHHHH
T ss_pred ccccccccchhhhccCCCCceeeCchhhcCC---CCCchhhHHHHHHH
Confidence 887554322 12234578899999988654 35788999999986
No 285
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.96 E-value=3.7e-29 Score=267.33 Aligned_cols=194 Identities=24% Similarity=0.337 Sum_probs=140.2
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHH-HHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIA-VLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ......++.+|+. +++.++||||+++++++.+++..++|
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv 99 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV-DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC-CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc-CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence 36789999999999999999965 578999999997653 2334455556665 67778999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CeEEcCCCCCCEEECCCCcEEEEeecccee
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQ-SFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~-~ivHrDikp~NIll~~~~~~kL~DfG~a~~ 736 (782)
|||+++ +|.+++..........+++..+..++.|++.||.|||+ . ||+||||||+||+++.++.+||+|||+++.
T Consensus 100 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 100 MELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp ECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 999975 88888765443334568999999999999999999998 7 999999999999999999999999999987
Q ss_pred cCCCCceeeecccccccccCccccccch-hhhHHHHHHHHHhccc
Q 003982 737 APDGKYSVETRLAGTFGYLAPEYAGKHW-MILCQMTGLIWLHGSV 780 (782)
Q Consensus 737 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~dvws~Gvv 780 (782)
...... .....||+.|+|||++.... ...++.++||||+|++
T Consensus 176 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~i 218 (327)
T 3aln_A 176 LVDSIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGIT 218 (327)
T ss_dssp --------------------------------CCSHHHHHHHHHH
T ss_pred cccccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHH
Confidence 654322 22346899999999984321 1235678999999986
No 286
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.96 E-value=1.6e-29 Score=268.17 Aligned_cols=192 Identities=29% Similarity=0.425 Sum_probs=151.5
Q ss_pred HHHHhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCCh----hhHHHHHHHHHHHHhc----CCCCcceEEe
Q 003982 576 LRQVTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGN----KGLSEFQAEIAVLTKV----RHRHLVALLG 646 (782)
Q Consensus 576 l~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l----~h~nI~~~~~ 646 (782)
...+.++|++.+.||+|+||.||+|.. .+++.||||++....... .....+.+|+++++++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 445678899999999999999999965 578899999997654321 1233466799999998 8999999999
Q ss_pred EEEeCCeEEEEEEc-cCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEEC-CCC
Q 003982 647 YCINGSERLLVYEY-MPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG-DDM 724 (782)
Q Consensus 647 ~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~-~~~ 724 (782)
++.+.+..++|||| +++++|.+++... ..+++.++..++.|++.||+|||+ .||+||||||+||+++ .++
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~ 177 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITEK-----GPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRG 177 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTT
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCC
Confidence 99999999999999 7899999999762 358999999999999999999999 8999999999999999 889
Q ss_pred cEEEEeeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 725 RAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 725 ~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.+||+|||++........ ....||+.|+|||++.+. .....++||||+|++
T Consensus 178 ~~kl~dfg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~i 228 (312)
T 2iwi_A 178 CAKLIDFGSGALLHDEPY---TDFDGTRVYSPPEWISRH--QYHALPATVWSLGIL 228 (312)
T ss_dssp EEEECCCSSCEECCSSCB---CCCCSCTTTSCHHHHHHS--CBCHHHHHHHHHHHH
T ss_pred eEEEEEcchhhhcccCcc---cccCCcccccCceeeecC--CCCCccchHHHHHHH
Confidence 999999999987765332 334689999999987654 123568999999986
No 287
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.96 E-value=4.7e-29 Score=265.47 Aligned_cols=187 Identities=24% Similarity=0.371 Sum_probs=148.8
Q ss_pred hcCCCccceeecccceEEEEEEeC-CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEE---------
Q 003982 580 TDNFSEANILGRGGFGVVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCI--------- 649 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~--------- 649 (782)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 87 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD--PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD 87 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS--HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC-
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC--hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccc
Confidence 478999999999999999999654 58999999987543 456678999999999999999999999873
Q ss_pred -----eCCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEEC-CC
Q 003982 650 -----NGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG-DD 723 (782)
Q Consensus 650 -----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~-~~ 723 (782)
+....++||||++ |+|.+++.. .++++.++..++.|++.||+|||+ .||+||||||+||+++ ++
T Consensus 88 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~ 157 (320)
T 2i6l_A 88 VGSLTELNSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTED 157 (320)
T ss_dssp ---CCSCSEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTT
T ss_pred cccccccCceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCC
Confidence 3467899999997 699998853 458999999999999999999999 8999999999999997 56
Q ss_pred CcEEEEeeccceecCCCCc--eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 724 MRAKVADFGLVKNAPDGKY--SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 724 ~~~kL~DfG~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+.+||+|||+++....... .......+|+.|+|||++.+. ..++.++||||+|++
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~i 214 (320)
T 2i6l_A 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSP--NNYTKAIDMWAAGCI 214 (320)
T ss_dssp TEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCT--TCCCHHHHHHHHHHH
T ss_pred CeEEEccCccccccCCCcccccccccccccccccCcHHhcCc--ccCCchhhhHhHHHH
Confidence 7999999999987643221 112334679999999987542 135678999999986
No 288
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.96 E-value=4.4e-29 Score=292.92 Aligned_cols=180 Identities=23% Similarity=0.371 Sum_probs=154.0
Q ss_pred hcCCCccceeecccceEEEEEEeC--CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCe----
Q 003982 580 TDNFSEANILGRGGFGVVYGGELP--DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE---- 653 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~---- 653 (782)
.++|++.+.||+|+||.||+|... +++.||||++.... .......+.+|++++++++||||+++++++.+.+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG-DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC-CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 478999999999999999999664 68999999986532 23456778999999999999999999999987665
Q ss_pred -EEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeec
Q 003982 654 -RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG 732 (782)
Q Consensus 654 -~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG 732 (782)
.|+||||+++++|.+++.. .+++.+++.++.|++.||+|||+ .||+||||||+||+++.+ .+||+|||
T Consensus 158 ~~~lv~E~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG 226 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLG 226 (681)
T ss_dssp EEEEEEECCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCT
T ss_pred eeEEEEEeCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEecc
Confidence 7999999999999887632 58999999999999999999999 899999999999999886 89999999
Q ss_pred cceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 733 LVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 733 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+++..... ....||+.|+|||++.+. .+.++||||+||+
T Consensus 227 ~a~~~~~~-----~~~~gt~~y~aPE~~~~~----~~~~sDi~slG~~ 265 (681)
T 2pzi_A 227 AVSRINSF-----GYLYGTPGFQAPEIVRTG----PTVATDIYTVGRT 265 (681)
T ss_dssp TCEETTCC-----SCCCCCTTTSCTTHHHHC----SCHHHHHHHHHHH
T ss_pred cchhcccC-----CccCCCccccCHHHHcCC----CCCceehhhhHHH
Confidence 99877543 235699999999988764 2678999999986
No 289
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.96 E-value=2.2e-29 Score=272.18 Aligned_cols=184 Identities=25% Similarity=0.398 Sum_probs=153.2
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCe-----
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSE----- 653 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~----- 653 (782)
.++|.+.+.||+|+||.||+|.. .+|+.||||++..........+.+.+|+.+++.++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 46799999999999999999955 578999999997755445567789999999999999999999999987654
Q ss_pred -EEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeec
Q 003982 654 -RLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFG 732 (782)
Q Consensus 654 -~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG 732 (782)
.++||||++ ++|.+++. ..+++.++..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||
T Consensus 103 ~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg 171 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG-------LKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFG 171 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT-------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTT
T ss_pred eEEEEecccc-CCHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeecc
Confidence 499999996 68877662 248999999999999999999999 899999999999999999999999999
Q ss_pred cceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 733 LVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 733 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+++..... .....||+.|+|||++.+. ..++.++||||+|++
T Consensus 172 ~~~~~~~~----~~~~~~t~~y~aPE~~~~~--~~~~~~~Di~slG~i 213 (353)
T 3coi_A 172 LARHADAE----MTGYVVTRWYRAPEVILSW--MHYNQTVDIWSVGCI 213 (353)
T ss_dssp CTTC------------CCSBCCSCHHHHSCC--SCCCTTHHHHHHHHH
T ss_pred cccCCCCC----ccccccCcCcCCHHHHhCc--CCCCchhhHHHHHHH
Confidence 99765432 2334689999999987653 134667899999986
No 290
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.96 E-value=1.4e-28 Score=263.58 Aligned_cols=184 Identities=27% Similarity=0.368 Sum_probs=133.8
Q ss_pred HhcCCCccc-eeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEe----CC
Q 003982 579 VTDNFSEAN-ILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN----GS 652 (782)
Q Consensus 579 ~~~~y~~~~-~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~----~~ 652 (782)
+.++|.+.+ .||+|+||.||+|.. .+++.||||++.... ....+....++.++||||+++++++.. ..
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 99 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP------KARQEVDHHWQASGGPHIVCILDVYENMHHGKR 99 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH------HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH------HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCc
Confidence 457888855 699999999999965 478999999986532 222223334566789999999999876 44
Q ss_pred eEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECC---CCcEEEE
Q 003982 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD---DMRAKVA 729 (782)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~---~~~~kL~ 729 (782)
..++||||+++|+|.+++.... ...+++.++..++.|++.||+|||+ .||+||||||+||+++. ++.+||+
T Consensus 100 ~~~lv~e~~~gg~L~~~l~~~~---~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~ 173 (336)
T 3fhr_A 100 CLLIIMECMEGGELFSRIQERG---DQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLT 173 (336)
T ss_dssp EEEEEEECCTTEEHHHHHHTC----CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred eEEEEEeccCCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEe
Confidence 5799999999999999997532 2468999999999999999999999 89999999999999976 4569999
Q ss_pred eeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 730 DFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 730 DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|||+++....... ....||+.|+|||++.+. .++.++||||+|++
T Consensus 174 Dfg~~~~~~~~~~---~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~i 218 (336)
T 3fhr_A 174 DFGFAKETTQNAL---QTPCYTPYYVAPEVLGPE---KYDKSCDMWSLGVI 218 (336)
T ss_dssp CCTTCEEC-------------------------C---HHHHHHHHHHHHHH
T ss_pred ccccceecccccc---ccCCCCcCccChhhhCCC---CCCchhhHHHHHHH
Confidence 9999987654322 234689999999998664 56889999999986
No 291
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=4e-28 Score=253.96 Aligned_cols=200 Identities=25% Similarity=0.324 Sum_probs=168.3
Q ss_pred EEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCC
Q 003982 69 TTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDN 147 (782)
Q Consensus 69 ~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 147 (782)
+.++.++++++ .+|..+ .++|++|+|++|.+++.++ .|.++++|++|+|++|+++++++..|.++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 56777888887 566544 4689999999999998887 6899999999999999999998888999999999999999
Q ss_pred C-CCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCcc
Q 003982 148 P-NLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSG 226 (782)
Q Consensus 148 ~-l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~ 226 (782)
+ +.. ..|..+..+++|++|+|++|++++..+..|..+++|++|++++|++++..+..
T Consensus 91 ~~l~~--~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~-------------------- 148 (285)
T 1ozn_A 91 AQLRS--VDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDT-------------------- 148 (285)
T ss_dssp TTCCC--CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT--------------------
T ss_pred CCccc--cCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhH--------------------
Confidence 7 666 34778889999999999999999888888999999999999999998433333
Q ss_pred ccccccCCCCCcEEEeecccccCCCCC-CCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCC
Q 003982 227 TLDVLSGMTQLRQVWLHKNQFTGPIPD-LSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGP 297 (782)
Q Consensus 227 ~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 297 (782)
+.++++|++|+|++|++++.++. +..+++|+.|+|++|++++..|..|..+++|+.|++++|++++.
T Consensus 149 ----~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 216 (285)
T 1ozn_A 149 ----FRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSAL 216 (285)
T ss_dssp ----TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred ----hccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcC
Confidence 34588899999999988887764 88888899999999988888888888888888888888888754
No 292
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.96 E-value=5.2e-29 Score=289.38 Aligned_cols=190 Identities=23% Similarity=0.378 Sum_probs=155.9
Q ss_pred HhcCCCccceeecccceEEEEEEeC----CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGELP----DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSER 654 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~ 654 (782)
..++|++.+.||+|+||.||+|... .+..||||+++... .....+.+.+|+.++++++||||+++++++. ++..
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~ 465 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 465 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCce
Confidence 3467999999999999999999653 24579999986533 2445678999999999999999999999985 5678
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccc
Q 003982 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLV 734 (782)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a 734 (782)
++||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++
T Consensus 466 ~lv~E~~~~g~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a 538 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVR----KFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLS 538 (656)
T ss_dssp EEEEECCTTCBHHHHHHHT----TTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCC
T ss_pred EEEEEcCCCCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCC
Confidence 9999999999999999752 2358999999999999999999999 89999999999999999999999999999
Q ss_pred eecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 735 KNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 735 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+..............+|+.|+|||++.+. .++.++||||+|++
T Consensus 539 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~DiwSlG~i 581 (656)
T 2j0j_A 539 RYMEDSTYYKASKGKLPIKWMAPESINFR---RFTSASDVWMFGVC 581 (656)
T ss_dssp CSCCC----------CCGGGCCHHHHHHC---CCCHHHHHHHHHHH
T ss_pred eecCCCcceeccCCCCCcceeCHHHhcCC---CCCchhhHHHHHHH
Confidence 87765443333344678899999988654 45778999999986
No 293
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.96 E-value=1.7e-28 Score=274.19 Aligned_cols=187 Identities=24% Similarity=0.322 Sum_probs=157.1
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCC-CCcceEEeEEEeCCeEEE
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRH-RHLVALLGYCINGSERLL 656 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~nI~~~~~~~~~~~~~~l 656 (782)
+.++|++.+.||+|+||.||+|.. .+++.||||++..... ...+.+|+++++.++| ++|..+..++.+.+..++
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l 80 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL 80 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence 357899999999999999999964 6789999998865432 2357899999999986 667777777788889999
Q ss_pred EEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEE---CCCCcEEEEeecc
Q 003982 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI---GDDMRAKVADFGL 733 (782)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll---~~~~~~kL~DfG~ 733 (782)
||||+ +++|.+++... ...+++.+++.++.||+.||+|||+ .||+||||||+|||+ +.++.+||+|||+
T Consensus 81 vme~~-g~sL~~ll~~~----~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGl 152 (483)
T 3sv0_A 81 VMDLL-GPSLEDLFNFC----SRKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 152 (483)
T ss_dssp EEECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTT
T ss_pred EEECC-CCCHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCc
Confidence 99999 99999999753 2358999999999999999999999 899999999999999 5788999999999
Q ss_pred ceecCCCCc------eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 734 VKNAPDGKY------SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 734 a~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
++....... .......||+.|+|||++.+. .++.++||||||||
T Consensus 153 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~s~~sDvwSlGvi 202 (483)
T 3sv0_A 153 AKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGI---EQSRRDDLESLGYV 202 (483)
T ss_dssp CEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTC---CCCHHHHHHHHHHH
T ss_pred ceeccCCccccccccccccccCCCccccCHHHhcCC---CCChHHHHHHHHHH
Confidence 987755332 122346799999999998775 45778999999986
No 294
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.96 E-value=9.6e-28 Score=248.81 Aligned_cols=217 Identities=28% Similarity=0.421 Sum_probs=193.1
Q ss_pred CCCccccceEeCCCCCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCC
Q 003982 52 TGYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPT 130 (782)
Q Consensus 52 ~~~c~w~gv~c~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~ 130 (782)
.++|.|.|+.|...++.+.+++++++++ .+|..+. ++|++|+|++|++++.++ .|.++++|++|+|++|+++.+++
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~ 78 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPA 78 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCT
T ss_pred CccCCCCCCCCEeCCCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeCh
Confidence 3789999999987677889999999999 5777665 689999999999999887 79999999999999999999999
Q ss_pred CCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCcccccc
Q 003982 131 GCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKS 210 (782)
Q Consensus 131 ~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 210 (782)
..|.++++|++|+|++|++.. ..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|+++ .+|..
T Consensus 79 ~~~~~l~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~---- 151 (270)
T 2o6q_A 79 GIFKELKNLETLWVTDNKLQA--LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKG---- 151 (270)
T ss_dssp TTTSSCTTCCEEECCSSCCCC--CCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTT----
T ss_pred hhhcCCCCCCEEECCCCcCCc--CCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCC-ccCHh----
Confidence 999999999999999999988 44567889999999999999999999999999999999999999998 44432
Q ss_pred ccchhhcccccCCCccccccccCCCCCcEEEeecccccCCCCC-CCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEc
Q 003982 211 DIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPD-LSKCESLFDLSLRDNQLTGVVPASVISLPALLNISL 289 (782)
Q Consensus 211 ~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 289 (782)
.|.++++|++|+|++|++++.++. |..+++|++|+|++|+|++..+..|..+++|+.|++
T Consensus 152 -------------------~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 212 (270)
T 2o6q_A 152 -------------------VFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQL 212 (270)
T ss_dssp -------------------TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred -------------------HccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEe
Confidence 144689999999999999988775 888999999999999999877778999999999999
Q ss_pred cCCcccCC
Q 003982 290 QNNKLQGP 297 (782)
Q Consensus 290 ~~N~l~~~ 297 (782)
++|++...
T Consensus 213 ~~N~~~c~ 220 (270)
T 2o6q_A 213 QENPWDCT 220 (270)
T ss_dssp CSSCBCCS
T ss_pred cCCCeeCC
Confidence 99998753
No 295
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.95 E-value=1.5e-28 Score=268.34 Aligned_cols=187 Identities=22% Similarity=0.295 Sum_probs=156.9
Q ss_pred HhcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcC-CC-----CcceEEeEEEeC
Q 003982 579 VTDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HR-----HLVALLGYCING 651 (782)
Q Consensus 579 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----nI~~~~~~~~~~ 651 (782)
+.++|++.+.||+|+||+||+|.. .+++.||||+++.. ......+.+|+++++.++ |+ +|+++++++...
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK---KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc---HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 457899999999999999999954 47889999999753 344567888999998885 55 499999999999
Q ss_pred CeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEEC--CCCcEEEE
Q 003982 652 SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIG--DDMRAKVA 729 (782)
Q Consensus 652 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~--~~~~~kL~ 729 (782)
+..++||||++ ++|.+++.... ...+++..+..++.|++.||.|||+ ++.||+||||||+|||++ .++.+||+
T Consensus 129 ~~~~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~ 203 (382)
T 2vx3_A 129 NHLCLVFEMLS-YNLYDLLRNTN---FRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIV 203 (382)
T ss_dssp TEEEEEEECCC-CBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEEC
T ss_pred CceEEEEecCC-CCHHHHHhhcC---cCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEE
Confidence 99999999995 59999987632 2458999999999999999999994 137999999999999995 47789999
Q ss_pred eeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 730 DFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 730 DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|||+|+...... ....||+.|+|||++.+. .++.++||||+||+
T Consensus 204 DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~---~~~~~~DiwSlG~i 247 (382)
T 2vx3_A 204 DFGSSCQLGQRI----YQYIQSRFYRSPEVLLGM---PYDLAIDMWSLGCI 247 (382)
T ss_dssp CCTTCEETTCCC----CSSCSCGGGCCHHHHTTC---CCCTHHHHHHHHHH
T ss_pred eccCceeccccc----ccccCCccccChHHHcCC---CCCcHHHHHHHHHH
Confidence 999998875432 235789999999998775 35778999999986
No 296
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=3.6e-28 Score=262.52 Aligned_cols=270 Identities=18% Similarity=0.199 Sum_probs=221.4
Q ss_pred ceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccc
Q 003982 93 ETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDN 172 (782)
Q Consensus 93 ~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~ 172 (782)
...++++|.++.++..+. ++|++|+|++|+++.+++..|.++++|++|+|++|++.. ..|..|.++++|++|+|++
T Consensus 34 ~~c~~~~~~l~~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~Ls~ 109 (353)
T 2z80_A 34 GICKGSSGSLNSIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINT--IEEDSFSSLGSLEHLDLSY 109 (353)
T ss_dssp SEEECCSTTCSSCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCE--ECTTTTTTCTTCCEEECCS
T ss_pred eEeeCCCCCccccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCc--cCHhhcCCCCCCCEEECCC
Confidence 347889999998776654 589999999999999999899999999999999999988 4567899999999999999
Q ss_pred cccCCCCcccccCCCCCcEEEcccCcCCCCCCc-cccccccchhhcccccCCCccccccccCCCCCcEEEeecc-cccCC
Q 003982 173 ANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPA-SFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKN-QFTGP 250 (782)
Q Consensus 173 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N-~l~~~ 250 (782)
|++++..+..|..+++|++|+|++|+++ .+|. . .+.++++|++|++++| .+++.
T Consensus 110 n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~-----------------------~~~~l~~L~~L~l~~n~~~~~~ 165 (353)
T 2z80_A 110 NYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETS-----------------------LFSHLTKLQILRVGNMDTFTKI 165 (353)
T ss_dssp SCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSC-----------------------SCTTCTTCCEEEEEESSSCCEE
T ss_pred CcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchh-----------------------hhccCCCCcEEECCCCcccccc
Confidence 9999987777999999999999999998 5654 2 2456899999999999 47766
Q ss_pred CC-CCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCCCCCCccEEEccCCcCCCCCCCCCCCCChh
Q 003982 251 IP-DLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDPQ 329 (782)
Q Consensus 251 ~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~~~ 329 (782)
++ .+..+++|++|++++|++++..|..+..+++|++|++++|+++...+.
T Consensus 166 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~----------------------------- 216 (353)
T 2z80_A 166 QRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEI----------------------------- 216 (353)
T ss_dssp CTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHH-----------------------------
T ss_pred CHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhh-----------------------------
Confidence 55 588999999999999999988899999999999999999988632111
Q ss_pred hhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCcccc---ccccCCeEecccccccc-
Q 003982 330 VTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYA---NLTSLKNLYLQQNNLTG- 405 (782)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~g- 405 (782)
.+..+++|++|++++|.+++..+..+. ....++.++|++|++++
T Consensus 217 --------------------------------~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~ 264 (353)
T 2z80_A 217 --------------------------------FVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDE 264 (353)
T ss_dssp --------------------------------HHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHH
T ss_pred --------------------------------hhhhcccccEEECCCCccccccccccccccccchhhccccccccccCc
Confidence 112245777788888877765554443 45678889999998887
Q ss_pred ---cCCccCCCCCCCCeEecCCCcCCCCCCCC-C--CCcceecCCCCCCCCC
Q 003982 406 ---PIPDGLTKLASLQNLDVSNNNLSGKVPDF-G--SNVKFTVSPGNPFIGT 451 (782)
Q Consensus 406 ---~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~--~~~~~~~~~~n~~~~~ 451 (782)
.+|+.+..+++|+.|||++|+++..++.+ . ..+....+.+||+.|.
T Consensus 265 ~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 265 SLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp HHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred chhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCc
Confidence 57888999999999999999999655553 3 5677889999999773
No 297
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=7.5e-28 Score=254.61 Aligned_cols=247 Identities=22% Similarity=0.257 Sum_probs=190.4
Q ss_pred ceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccc
Q 003982 93 ETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDN 172 (782)
Q Consensus 93 ~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~ 172 (782)
+.++++++.++.++..+. ++|++|+|++|+++.++...|.++++|++|+|++|++...
T Consensus 10 ~~l~c~~~~l~~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-------------------- 67 (306)
T 2z66_A 10 TEIRCNSKGLTSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFK-------------------- 67 (306)
T ss_dssp TEEECCSSCCSSCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEE--------------------
T ss_pred CEEEcCCCCcccCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcc--------------------
Confidence 356666666665554332 4666666666666666666666666666666666655431
Q ss_pred cccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccccCCCC
Q 003982 173 ANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIP 252 (782)
Q Consensus 173 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 252 (782)
+..+..+..+++|++|+|++|.++ .+|..+ .++++|++|++++|++++.++
T Consensus 68 ----~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~------------------------~~l~~L~~L~l~~n~l~~~~~ 118 (306)
T 2z66_A 68 ----GCCSQSDFGTTSLKYLDLSFNGVI-TMSSNF------------------------LGLEQLEHLDFQHSNLKQMSE 118 (306)
T ss_dssp ----EEEEHHHHSCSCCCEEECCSCSEE-EEEEEE------------------------ETCTTCCEEECTTSEEESSTT
T ss_pred ----cCcccccccccccCEEECCCCccc-cChhhc------------------------CCCCCCCEEECCCCccccccc
Confidence 222455556778888888888776 455433 347888888888888887665
Q ss_pred --CCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccC-CCCCCCCCccEEEccCCcCCCCCCCCCCCCChh
Q 003982 253 --DLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQG-PYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDPQ 329 (782)
Q Consensus 253 --~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~~~ 329 (782)
.+..+++|++|++++|++++..+..|..+++|++|++++|++++ ..
T Consensus 119 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~------------------------------- 167 (306)
T 2z66_A 119 FSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFL------------------------------- 167 (306)
T ss_dssp TTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEE-------------------------------
T ss_pred chhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccc-------------------------------
Confidence 58899999999999999999999999999999999999999885 22
Q ss_pred hhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccccccCCc
Q 003982 330 VTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPD 409 (782)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 409 (782)
|..+..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..+.
T Consensus 168 ------------------------------~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 217 (306)
T 2z66_A 168 ------------------------------PDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTF 217 (306)
T ss_dssp ------------------------------CSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSG
T ss_pred ------------------------------hhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChh
Confidence 23344567899999999999998899999999999999999999988888
Q ss_pred cCCCCCCCCeEecCCCcCCCCCCC-CC---CCcceecCCCCCCCCC
Q 003982 410 GLTKLASLQNLDVSNNNLSGKVPD-FG---SNVKFTVSPGNPFIGT 451 (782)
Q Consensus 410 ~~~~l~~L~~L~ls~N~l~g~~p~-~~---~~~~~~~~~~n~~~~~ 451 (782)
.+..+++|+.|||++|++++.+|. +. ..+....+.+|++.|.
T Consensus 218 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 218 PYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp GGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred hccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 899999999999999999998884 32 4677888999999763
No 298
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.95 E-value=2.7e-28 Score=263.73 Aligned_cols=184 Identities=23% Similarity=0.352 Sum_probs=155.3
Q ss_pred hcCCCccceeecccceEEEEEEe-CCC-cEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCC------cceEEeEEEeC
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDG-TKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRH------LVALLGYCING 651 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~-~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------I~~~~~~~~~~ 651 (782)
.++|++.+.||+|+||.||+|.. .++ +.||+|+++.. ....+.+.+|++++++++|++ ++.+++++...
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 94 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV---GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH 94 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc---ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence 47899999999999999999965 344 68999999753 345677889999999997665 99999999999
Q ss_pred CeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEE-----------
Q 003982 652 SERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILI----------- 720 (782)
Q Consensus 652 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll----------- 720 (782)
+..++||||+ ++++.+++... ....+++.++..++.|++.||+|||+ .||+||||||+||++
T Consensus 95 ~~~~lv~e~~-~~~l~~~l~~~---~~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~ 167 (355)
T 2eu9_A 95 GHMCIAFELL-GKNTFEFLKEN---NFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNE 167 (355)
T ss_dssp TEEEEEEECC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECC
T ss_pred CeEEEEEecc-CCChHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecccccccccc
Confidence 9999999999 67788877652 22468999999999999999999998 899999999999999
Q ss_pred --------CCCCcEEEEeeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 721 --------GDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 721 --------~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+.++.+||+|||+++...... ....||+.|+|||++.+. .++.++||||+|++
T Consensus 168 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~i 228 (355)
T 2eu9_A 168 HKSCEEKSVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILEL---GWAQPCDVWSIGCI 228 (355)
T ss_dssp C-CCCEEEESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTC---CCCTHHHHHHHHHH
T ss_pred cccccccccCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecC---CCCCccchHHHHHH
Confidence 567899999999998754422 335789999999998764 45678999999986
No 299
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.95 E-value=9.5e-29 Score=273.47 Aligned_cols=187 Identities=27% Similarity=0.367 Sum_probs=146.6
Q ss_pred cCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhc-CCCCcceEEeEEEeCCeEEEEEE
Q 003982 581 DNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYE 659 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~lv~e 659 (782)
.+|.+.++||+|+||+||.....+++.||||++..... ..+.+|+++++++ +||||+++++++.+....|+|||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 46888999999999997666556899999999965432 2357899999999 79999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECC-----CCcEEEEeeccc
Q 003982 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD-----DMRAKVADFGLV 734 (782)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~-----~~~~kL~DfG~a 734 (782)
|++ |+|.+++.... ....+.++..++.|++.||+|||+ .||+||||||+||+++. ...+||+|||+|
T Consensus 99 ~~~-g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a 170 (432)
T 3p23_A 99 LCA-ATLQEYVEQKD----FAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170 (432)
T ss_dssp CCS-EEHHHHHHSSS----CCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred CCC-CCHHHHHHhcC----CCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence 995 69999987532 234455678899999999999999 89999999999999953 236889999999
Q ss_pred eecCCCCc--eeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 735 KNAPDGKY--SVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 735 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
+....... .......||+.|+|||++.+......+.++||||+||+
T Consensus 171 ~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~i 218 (432)
T 3p23_A 171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCV 218 (432)
T ss_dssp ECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHH
T ss_pred eeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHH
Confidence 87754321 22344679999999999875433345668999999986
No 300
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=3.1e-27 Score=263.10 Aligned_cols=246 Identities=18% Similarity=0.214 Sum_probs=174.1
Q ss_pred CceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeecc
Q 003982 92 LETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMD 171 (782)
Q Consensus 92 L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~ 171 (782)
...++.+++.++.+++.+. ++++.|+|++|+|+.+++..|.++++|++|+|++|++.. ..+..|.++++|++|+|+
T Consensus 45 ~~~v~c~~~~l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~--i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRT--IEIGAFNGLANLNTLELF 120 (440)
T ss_dssp SCEEECCSCCCSSCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCE--ECGGGGTTCSSCCEEECC
T ss_pred CCEEEeCCCCcCcCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCc--cChhhccCCccCCEEECC
Confidence 4468888888887766554 678888888888888887777777777777777777665 233445555555555555
Q ss_pred ccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccccCCC
Q 003982 172 NANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPI 251 (782)
Q Consensus 172 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 251 (782)
+|+|+.+.+..|..+++|++|+| ++|+++..+
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L------------------------------------------------~~N~i~~~~ 152 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWL------------------------------------------------RNNPIESIP 152 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEEC------------------------------------------------CSCCCCEEC
T ss_pred CCcCCeeCHhHhhccccCceeeC------------------------------------------------CCCcccccC
Confidence 55555444444444444444444 444444433
Q ss_pred C-CCCCCCCCCEEEcCCC-cCccCcchhhcCCCCCCEEEccCCcccCCCCCCCCCccEEEccCCcCCCCCCCCCCCCChh
Q 003982 252 P-DLSKCESLFDLSLRDN-QLTGVVPASVISLPALLNISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDPQ 329 (782)
Q Consensus 252 ~-~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~~~ 329 (782)
+ .|..+++|++|+|++| .+....+..|.++++|++|++++|+++.. |
T Consensus 153 ~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~------------------------------ 201 (440)
T 3zyj_A 153 SYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-P------------------------------ 201 (440)
T ss_dssp TTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC-C------------------------------
T ss_pred HHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc-c------------------------------
Confidence 3 3555666666666663 34433444666777777777777766621 1
Q ss_pred hhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccccccCCc
Q 003982 330 VTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPD 409 (782)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 409 (782)
.+..+++|+.|+|++|.|++..|..|.++++|++|+|++|+|++..|.
T Consensus 202 --------------------------------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 249 (440)
T 3zyj_A 202 --------------------------------NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERN 249 (440)
T ss_dssp --------------------------------CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTT
T ss_pred --------------------------------ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChh
Confidence 022345788888888888888889999999999999999999999999
Q ss_pred cCCCCCCCCeEecCCCcCCCCCCCCC---CCcceecCCCCCCCCCC
Q 003982 410 GLTKLASLQNLDVSNNNLSGKVPDFG---SNVKFTVSPGNPFIGTN 452 (782)
Q Consensus 410 ~~~~l~~L~~L~ls~N~l~g~~p~~~---~~~~~~~~~~n~~~~~~ 452 (782)
.|..+++|+.|||++|+|++.++... ..+....+.+|||.|..
T Consensus 250 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 295 (440)
T 3zyj_A 250 AFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNC 295 (440)
T ss_dssp SSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSS
T ss_pred hhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCC
Confidence 99999999999999999998888543 56778899999998853
No 301
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=8.1e-28 Score=251.60 Aligned_cols=222 Identities=22% Similarity=0.288 Sum_probs=196.3
Q ss_pred CCCCCCcccc---ceEeCC----------CCCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCC
Q 003982 49 TSSTGYCEWT---GINCDN----------SNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATS 114 (782)
Q Consensus 49 ~~~~~~c~w~---gv~c~~----------~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~ 114 (782)
++..|.|... .|.|+. ..+++.|+|++|++++..+..|..+++|++|+|++|.+++..| .|.++++
T Consensus 2 CP~~C~C~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 81 (285)
T 1ozn_A 2 CPGACVCYNEPKVTTSCPQQGLQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLAL 81 (285)
T ss_dssp CCTTCEEECSSSCEEECCSSCCSSCCTTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTT
T ss_pred cCCCceECCCCCeEEEcCcCCcccCCcCCCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccC
Confidence 3445556543 377764 2478999999999998777889999999999999999999877 7999999
Q ss_pred CCEEeCCCCc-ccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEE
Q 003982 115 LQDIYLDNNN-FTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLR 193 (782)
Q Consensus 115 L~~L~Ls~n~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 193 (782)
|++|+|++|+ ++.+++..|.++++|++|+|++|++.. ..|..+.++++|++|+|++|++++..+..|..+++|++|+
T Consensus 82 L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 159 (285)
T 1ozn_A 82 LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQE--LGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLF 159 (285)
T ss_dssp CCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCC--CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCE--ECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEE
Confidence 9999999997 999999999999999999999999998 5677899999999999999999999888899999999999
Q ss_pred cccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccccCCCC-CCCCCCCCCEEEcCCCcCcc
Q 003982 194 LSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIP-DLSKCESLFDLSLRDNQLTG 272 (782)
Q Consensus 194 Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~ 272 (782)
|++|++++..+.. +.++++|++|+|++|++++..+ .+..+++|+.|+|++|++++
T Consensus 160 l~~n~l~~~~~~~------------------------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 215 (285)
T 1ozn_A 160 LHGNRISSVPERA------------------------FRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA 215 (285)
T ss_dssp CCSSCCCEECTTT------------------------TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcccccCHHH------------------------hcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCc
Confidence 9999998433333 4468999999999999999765 58999999999999999998
Q ss_pred CcchhhcCCCCCCEEEccCCcccC
Q 003982 273 VVPASVISLPALLNISLQNNKLQG 296 (782)
Q Consensus 273 ~~p~~~~~l~~L~~L~l~~N~l~~ 296 (782)
..+..+..+++|+.|++++|++..
T Consensus 216 ~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 216 LPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp CCHHHHTTCTTCCEEECCSSCEEC
T ss_pred CCHHHcccCcccCEEeccCCCccC
Confidence 888889999999999999999984
No 302
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=3e-27 Score=264.15 Aligned_cols=246 Identities=19% Similarity=0.207 Sum_probs=174.8
Q ss_pred CceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeecc
Q 003982 92 LETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMD 171 (782)
Q Consensus 92 L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~ 171 (782)
...++.+++.++.++..+. ++|++|+|++|+|+.+++..|.++++|++|+|++|++.. ..+..|.++++|++|+|+
T Consensus 56 ~~~v~c~~~~l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~--~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQ--IEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SCEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE--ECTTTTTTCTTCCEEECC
T ss_pred CcEEEECCCCcCccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCC--cChhhccCcccCCEEECC
Confidence 3467788888887665553 678888888888888877777777777777777777666 334455555555555555
Q ss_pred ccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccccCCC
Q 003982 172 NANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPI 251 (782)
Q Consensus 172 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 251 (782)
+|+|+++.+..|..+++|++|+|++|+++ ..+
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~------------------------------------------------~~~ 163 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIE------------------------------------------------SIP 163 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCC------------------------------------------------EEC
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCcc------------------------------------------------eeC
Confidence 55555555555555555555555555554 333
Q ss_pred C-CCCCCCCCCEEEcCC-CcCccCcchhhcCCCCCCEEEccCCcccCCCCCCCCCccEEEccCCcCCCCCCCCCCCCChh
Q 003982 252 P-DLSKCESLFDLSLRD-NQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDPQ 329 (782)
Q Consensus 252 ~-~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~~~ 329 (782)
+ .|..+++|+.|+|++ |.+....+..|.++++|++|++++|++++. |.
T Consensus 164 ~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~----------------------------- 213 (452)
T 3zyi_A 164 SYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PN----------------------------- 213 (452)
T ss_dssp TTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CC-----------------------------
T ss_pred HhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-cc-----------------------------
Confidence 3 245555566666665 334433344566677777777777766632 10
Q ss_pred hhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccccccCCc
Q 003982 330 VTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPD 409 (782)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 409 (782)
+..+++|+.|+|++|.|++..|..|.++++|++|+|++|++++..|.
T Consensus 214 ---------------------------------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 260 (452)
T 3zyi_A 214 ---------------------------------LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERN 260 (452)
T ss_dssp ---------------------------------CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTT
T ss_pred ---------------------------------ccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHH
Confidence 22345788888888888888889999999999999999999999999
Q ss_pred cCCCCCCCCeEecCCCcCCCCCCCCC---CCcceecCCCCCCCCCC
Q 003982 410 GLTKLASLQNLDVSNNNLSGKVPDFG---SNVKFTVSPGNPFIGTN 452 (782)
Q Consensus 410 ~~~~l~~L~~L~ls~N~l~g~~p~~~---~~~~~~~~~~n~~~~~~ 452 (782)
.|..+++|+.|+|++|+|++.++... ..+....+.+|||.|..
T Consensus 261 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 261 AFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECST
T ss_pred HhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCC
Confidence 99999999999999999998887543 56778899999998853
No 303
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.95 E-value=1.3e-28 Score=273.21 Aligned_cols=191 Identities=27% Similarity=0.279 Sum_probs=145.0
Q ss_pred cCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhc-CCCCcceEEeEEEeCCeEEEEEE
Q 003982 581 DNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVYE 659 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~lv~e 659 (782)
+.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+++..++|||
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E 89 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE 89 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEe
Confidence 345667899999999998776678999999998653 235678999999986 89999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCC-------------C
Q 003982 660 YMPRGTLAQHLFEWHDHGY--TPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDD-------------M 724 (782)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~-------------~ 724 (782)
|++ |+|.+++........ ...++.++..++.|++.||+|||+ .||+||||||+||+++.+ +
T Consensus 90 ~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~ 165 (434)
T 2rio_A 90 LCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENL 165 (434)
T ss_dssp CCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSC
T ss_pred cCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCce
Confidence 995 699999976322111 111334567899999999999999 899999999999999654 4
Q ss_pred cEEEEeeccceecCCCCce---eeecccccccccCccccccch----hhhHHHHHHHHHhccc
Q 003982 725 RAKVADFGLVKNAPDGKYS---VETRLAGTFGYLAPEYAGKHW----MILCQMTGLIWLHGSV 780 (782)
Q Consensus 725 ~~kL~DfG~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~----~~~~~~~~dvws~Gvv 780 (782)
.+||+|||+++........ ......||+.|+|||++.+.. ...++.++||||+||+
T Consensus 166 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~i 228 (434)
T 2rio_A 166 RILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228 (434)
T ss_dssp EEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHH
T ss_pred EEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHH
Confidence 8999999999987654321 122357999999999986521 1245788999999986
No 304
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=4.5e-30 Score=272.26 Aligned_cols=59 Identities=22% Similarity=0.305 Sum_probs=45.8
Q ss_pred CCceeEEEccCcccccccCccccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcCCC
Q 003982 366 QGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSG 429 (782)
Q Consensus 366 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g 429 (782)
+++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|+.|+|++|++++
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 356777777777777 5666666 7888888888888865 65 8888888888888888876
No 305
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.95 E-value=2.5e-29 Score=267.67 Aligned_cols=191 Identities=21% Similarity=0.379 Sum_probs=154.7
Q ss_pred hcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVYE 659 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 659 (782)
.++|++.+.||+|+||.||+|.... .||+|+++.........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 5789999999999999999997643 59999997655444455678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecCC
Q 003982 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPD 739 (782)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~~ 739 (782)
|+++++|.+++... ...+++.++..++.|++.||+|||+ .||+||||||+||+++ ++.+||+|||++.....
T Consensus 110 ~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 110 LCKGRTLYSVVRDA----KIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181 (319)
T ss_dssp CCCSEEHHHHTTSS----CCCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred cccCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence 99999999998652 2358999999999999999999999 8999999999999998 67999999999875532
Q ss_pred CC----ceeeecccccccccCccccccch------hhhHHHHHHHHHhccc
Q 003982 740 GK----YSVETRLAGTFGYLAPEYAGKHW------MILCQMTGLIWLHGSV 780 (782)
Q Consensus 740 ~~----~~~~~~~~gt~~y~aPE~~~~~~------~~~~~~~~dvws~Gvv 780 (782)
.. ........||+.|+|||++.+.. ...++.++||||+|++
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~i 232 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTI 232 (319)
T ss_dssp ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHH
T ss_pred ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHH
Confidence 11 11122345899999999876521 1235778999999986
No 306
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.95 E-value=2.6e-28 Score=259.59 Aligned_cols=191 Identities=24% Similarity=0.341 Sum_probs=139.4
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 658 (782)
.++|++.+.||+|+||.||+|.. .+++.||||++..........+.+.++..+++.++||||+++++++.+++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 36789999999999999999965 47899999999765433333445556666788889999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQ-SFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~-~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
||+ ++.+..+.... ...+++..+..++.|++.||.|||+ . ||+||||||+||+++.++.+||+|||++...
T Consensus 104 e~~-~~~~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 175 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRM----QGPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDFGISGRL 175 (318)
T ss_dssp CCC-SEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred ecc-CCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence 999 55555544332 2458999999999999999999997 5 9999999999999999999999999999766
Q ss_pred CCCCceeeecccccccccCccccccc--hhhhHHHHHHHHHhccc
Q 003982 738 PDGKYSVETRLAGTFGYLAPEYAGKH--WMILCQMTGLIWLHGSV 780 (782)
Q Consensus 738 ~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~~~dvws~Gvv 780 (782)
..... .....||+.|+|||++.+. ....++.++||||+|++
T Consensus 176 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~i 218 (318)
T 2dyl_A 176 VDDKA--KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGIS 218 (318)
T ss_dssp -------------CCTTCCHHHHC--------CCTHHHHHHHHHH
T ss_pred cCCcc--ccccCCCccccChhhcccccccccCCccccchhhHHHH
Confidence 54322 2234689999999998532 11235678999999986
No 307
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.95 E-value=1.7e-28 Score=267.21 Aligned_cols=184 Identities=22% Similarity=0.321 Sum_probs=155.3
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcC-----------CCCcceEEeE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-----------HRHLVALLGY 647 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~nI~~~~~~ 647 (782)
.++|++.+.||+|+||.||+|.. .+++.||||++... ....+.+.+|++++++++ ||||++++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC---ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 36799999999999999999964 67899999999753 244577889999999886 8999999999
Q ss_pred EEeCC----eEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CeEEcCCCCCCEEEC-
Q 003982 648 CINGS----ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQ-SFIHRDLKPSNILIG- 721 (782)
Q Consensus 648 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~-~ivHrDikp~NIll~- 721 (782)
+...+ ..++||||+ +++|.+++..... ..+++.++..++.|++.||+|||+ . ||+||||||+||+++
T Consensus 95 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~ 167 (373)
T 1q8y_A 95 FNHKGPNGVHVVMVFEVL-GENLLALIKKYEH---RGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEI 167 (373)
T ss_dssp EEEEETTEEEEEEEECCC-CEEHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEE
T ss_pred hhccCCCCceEEEEEecC-CCCHHHHHHHhhc---cCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEec
Confidence 88654 789999999 8999999976432 358999999999999999999998 7 999999999999994
Q ss_pred -----CCCcEEEEeeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 722 -----DDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 722 -----~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
..+.+||+|||++....... ....||+.|+|||++.+. .++.++||||+|++
T Consensus 168 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~i 224 (373)
T 1q8y_A 168 VDSPENLIQIKIADLGNACWYDEHY----TNSIQTREYRSPEVLLGA---PWGCGADIWSTACL 224 (373)
T ss_dssp EETTTTEEEEEECCCTTCEETTBCC----CSCCSCGGGCCHHHHHTC---CCCTHHHHHHHHHH
T ss_pred cCCCcCcceEEEcccccccccCCCC----CCCCCCccccCcHHHhCC---CCCchHhHHHHHHH
Confidence 44589999999998765422 234789999999998765 35678999999986
No 308
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=2.5e-26 Score=263.58 Aligned_cols=257 Identities=23% Similarity=0.265 Sum_probs=216.8
Q ss_pred ccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeee
Q 003982 90 TQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLY 169 (782)
Q Consensus 90 ~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~ 169 (782)
.+++.|++++|.|+.+++.+. ++|++|+|++|+|+.+|. .+++|++|+|++|+++. +|. .+++|++|+
T Consensus 40 ~~l~~L~ls~n~L~~lp~~l~--~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~~---lp~---~l~~L~~L~ 107 (622)
T 3g06_A 40 NGNAVLNVGESGLTTLPDCLP--AHITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLTS---LPV---LPPGLLELS 107 (622)
T ss_dssp HCCCEEECCSSCCSCCCSCCC--TTCSEEEECSCCCSCCCC----CCTTCCEEEECSCCCSC---CCC---CCTTCCEEE
T ss_pred CCCcEEEecCCCcCccChhhC--CCCcEEEecCCCCCCCCC----cCCCCCEEEcCCCcCCc---CCC---CCCCCCEEE
Confidence 469999999999997666665 899999999999999887 57999999999999987 555 678999999
Q ss_pred ccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccccC
Q 003982 170 MDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTG 249 (782)
Q Consensus 170 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~ 249 (782)
|++|+++++.+ .+++|++|++++|+++ .+|.. +++|++|+|++|++++
T Consensus 108 Ls~N~l~~l~~----~l~~L~~L~L~~N~l~-~lp~~---------------------------l~~L~~L~Ls~N~l~~ 155 (622)
T 3g06_A 108 IFSNPLTHLPA----LPSGLCKLWIFGNQLT-SLPVL---------------------------PPGLQELSVSDNQLAS 155 (622)
T ss_dssp ECSCCCCCCCC----CCTTCCEEECCSSCCS-CCCCC---------------------------CTTCCEEECCSSCCSC
T ss_pred CcCCcCCCCCC----CCCCcCEEECCCCCCC-cCCCC---------------------------CCCCCEEECcCCcCCC
Confidence 99999998644 6789999999999998 56642 5889999999999998
Q ss_pred CCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCCCCCCccEEEccCCcCCCCCCCCCCCCChh
Q 003982 250 PIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDPQ 329 (782)
Q Consensus 250 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~~~ 329 (782)
.+. .+++|+.|++++|+|++ +| ..+++|+.|++++|++++ +|..+++|+.|++++|.++.++.
T Consensus 156 l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~--------- 218 (622)
T 3g06_A 156 LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTLPSELYKLWAYNNRLTSLPA--------- 218 (622)
T ss_dssp CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSSCCC---------
T ss_pred cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCccchhhEEECcCCcccccCC---------
Confidence 654 35789999999999995 56 567899999999999996 55567899999999999876541
Q ss_pred hhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccccccCCc
Q 003982 330 VTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPD 409 (782)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 409 (782)
..++|++|+|++|.|++ +| ..+++|++|+|++|+|+ .+|.
T Consensus 219 -----------------------------------~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~ 258 (622)
T 3g06_A 219 -----------------------------------LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM 258 (622)
T ss_dssp -----------------------------------CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC
T ss_pred -----------------------------------CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc
Confidence 12579999999999996 66 55689999999999999 6776
Q ss_pred cCCCCCCCCeEecCCCcCCCCCCCCC--CCcceecCCCCCCCC
Q 003982 410 GLTKLASLQNLDVSNNNLSGKVPDFG--SNVKFTVSPGNPFIG 450 (782)
Q Consensus 410 ~~~~l~~L~~L~ls~N~l~g~~p~~~--~~~~~~~~~~n~~~~ 450 (782)
.+++|+.|+|++|+|+..++.+. ..+....+.+|++.+
T Consensus 259 ---~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~L~~N~l~~ 298 (622)
T 3g06_A 259 ---LPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLSE 298 (622)
T ss_dssp ---CCTTCCEEECCSSCCCSCCGGGGGSCTTCEEECCSCCCCH
T ss_pred ---ccccCcEEeCCCCCCCcCCHHHhhccccCEEEecCCCCCC
Confidence 67899999999999995443443 567778899999864
No 309
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.9e-28 Score=279.34 Aligned_cols=176 Identities=20% Similarity=0.187 Sum_probs=125.7
Q ss_pred eecccceEEEEE-EeCCCcEEEEEEeccccCC--------hhhHHHHHHHHHHHHhc-CCCCcceEEeEEEeCCeEEEEE
Q 003982 589 LGRGGFGVVYGG-ELPDGTKIAVKRMESNTMG--------NKGLSEFQAEIAVLTKV-RHRHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 589 lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~--------~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~lv~ 658 (782)
.+.|+.|.+..+ +.-.|+.||||++.+.... ....++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 456666666655 3346889999999764321 22456799999999999 6999999999999999999999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecC
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~ 738 (782)
||++|++|.+++.+ .+++++. +|+.||+.||+|+|+ +|||||||||+|||+++++.+||+|||+|+...
T Consensus 322 Eyv~G~~L~d~i~~-----~~~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 322 EKLPGRLLSDMLAA-----GEEIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp ECCCSEEHHHHHHT-----TCCCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred ecCCCCcHHHHHHh-----CCCCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 99999999999976 2456654 478999999999999 999999999999999999999999999998775
Q ss_pred CCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 739 DGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 739 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.... .....+||+.|||||++.+. ....+|+|++|++
T Consensus 391 ~~~~-~~~t~vGTp~YmAPE~l~g~----~~~~~d~~s~g~~ 427 (569)
T 4azs_A 391 QDCS-WPTNLVQSFFVFVNELFAEN----KSWNGFWRSAPVH 427 (569)
T ss_dssp ---C-CSHHHHHHHHHHHHHHC--------------------
T ss_pred CCCc-cccCceechhhccHHHhCCC----CCCcccccccccc
Confidence 5332 22346899999999999875 3456889999875
No 310
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.95 E-value=1.2e-28 Score=281.13 Aligned_cols=190 Identities=28% Similarity=0.444 Sum_probs=158.2
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEe------CC
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN------GS 652 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~------~~ 652 (782)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... .....+.+.+|++++++++||||+++++++.. .+
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL-SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC-CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 47899999999999999999954 578999999987542 34566789999999999999999999998765 66
Q ss_pred eEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCc---EEEE
Q 003982 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMR---AKVA 729 (782)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~---~kL~ 729 (782)
..++||||+++|+|.+++..... ...+++.++..++.|++.||+|||+ .||+||||||+||+++.++. +||+
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~--~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~ 166 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFEN--CCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKII 166 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSC--TTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred eEEEEEEeCCCCCHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEc
Confidence 77999999999999999976322 2358889999999999999999999 89999999999999987664 9999
Q ss_pred eeccceecCCCCceeeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 730 DFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 730 DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
|||.+........ .....||+.|+|||++.+. .++.++||||+|++
T Consensus 167 DFG~a~~~~~~~~--~~~~~gt~~Y~APE~l~~~---~~s~ksDIwSLGvi 212 (676)
T 3qa8_A 167 DLGYAKELDQGEL--CTEFVGTLQYLAPELLEQK---KYTVTVDYWSFGTL 212 (676)
T ss_dssp SCCCCCBTTSCCC--CCCCCSCCTTCSSCSSCCS---CCSTTHHHHHHHHH
T ss_pred ccccccccccccc--cccccCCcccCChHHhccC---CCCchhHHHHHHHH
Confidence 9999987755432 2345789999999998764 45678999999986
No 311
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.95 E-value=6.3e-31 Score=295.16 Aligned_cols=326 Identities=18% Similarity=0.229 Sum_probs=223.2
Q ss_pred CEEEEEeCCCCCCc----ccCccccCCccCceeecccCccCccCC-C-CCCCC----CCCEEeCCCCcccCC----CCCC
Q 003982 67 RVTTISLAKSGLSG----TLSPEISSLTQLETLSFQMNNIAGAIP-S-LANAT----SLQDIYLDNNNFTSV----PTGC 132 (782)
Q Consensus 67 ~v~~L~l~~~~l~~----~~~~~l~~l~~L~~L~L~~N~l~~~~~-~-l~~l~----~L~~L~Ls~n~l~~~----~~~~ 132 (782)
+++.|+|++|+++. .++..+..+++|++|+|++|.+++..+ . +..++ +|++|+|++|+++.. .+..
T Consensus 29 ~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~ 108 (461)
T 1z7x_W 29 QCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSST 108 (461)
T ss_dssp TCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred CccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHH
Confidence 56777777777764 345667777778888888887765332 2 22233 688888888877742 2445
Q ss_pred CCCCCCCCEEeccCCCCCCCCCCCcc-----cCCCcccCeeeccccccCCCC----cccccCCCCCcEEEcccCcCCCCC
Q 003982 133 FDGLTNLQVLSLSDNPNLAPWPFPNE-----LTKSTSLTTLYMDNANIFGLI----PDFFDSFSNLQNLRLSYNNFTGSL 203 (782)
Q Consensus 133 ~~~l~~L~~L~Ls~N~l~~~~~~p~~-----~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~ 203 (782)
+.++++|++|+|++|++... .+.. ....++|++|+|++|++++.. +..+..+++|++|++++|.++...
T Consensus 109 l~~~~~L~~L~Ls~n~i~~~--~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~ 186 (461)
T 1z7x_W 109 LRTLPTLQELHLSDNLLGDA--GLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAG 186 (461)
T ss_dssp TTSCTTCCEEECCSSBCHHH--HHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHH
T ss_pred HccCCceeEEECCCCcCchH--HHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHH
Confidence 67777888888888776541 1111 223456888888888777643 455666778888888888876443
Q ss_pred Cccccc------cccchhhcccccCCCcc---ccccccCCCCCcEEEeecccccCCC-----CC-CCCCCCCCEEEcCCC
Q 003982 204 PASFAK------SDIQNLWMNDQQLGLSG---TLDVLSGMTQLRQVWLHKNQFTGPI-----PD-LSKCESLFDLSLRDN 268 (782)
Q Consensus 204 p~~~~~------~~l~~l~l~~~~~~~~~---~~~~~~~l~~L~~L~L~~N~l~~~~-----~~-~~~l~~L~~L~L~~N 268 (782)
+..+.. ..++.|++++|.+...+ ....+..+++|++|++++|++++.. +. +..+++|++|++++|
T Consensus 187 ~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n 266 (461)
T 1z7x_W 187 VRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWEC 266 (461)
T ss_dssp HHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred HHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCC
Confidence 333322 36777888877765443 1234556788888888888876532 22 345778888888888
Q ss_pred cCccC----cchhhcCCCCCCEEEccCCcccCCCCC--------CCCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHh
Q 003982 269 QLTGV----VPASVISLPALLNISLQNNKLQGPYPL--------FPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQI 336 (782)
Q Consensus 269 ~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~~~--------~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~ 336 (782)
++++. ++..+..+++|++|++++|++++..+. ...+|+.|++++|.++...
T Consensus 267 ~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~----------------- 329 (461)
T 1z7x_W 267 GITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAAC----------------- 329 (461)
T ss_dssp CCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGG-----------------
T ss_pred CCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHH-----------------
Confidence 88754 566777788888888888887643221 1247888888888775422
Q ss_pred hcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccc-----cccCCeEecccccccc----cC
Q 003982 337 AGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYAN-----LTSLKNLYLQQNNLTG----PI 407 (782)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~g----~~ 407 (782)
+..+|..+..+++|++|+|++|.+++..+..+.. .++|++|+|++|++++ .+
T Consensus 330 -------------------~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l 390 (461)
T 1z7x_W 330 -------------------CSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSL 390 (461)
T ss_dssp -------------------HHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHH
T ss_pred -------------------HHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHH
Confidence 1123445566788999999999998776665553 6799999999999986 78
Q ss_pred CccCCCCCCCCeEecCCCcCCCC
Q 003982 408 PDGLTKLASLQNLDVSNNNLSGK 430 (782)
Q Consensus 408 p~~~~~l~~L~~L~ls~N~l~g~ 430 (782)
|..+..+++|+.|||++|++++.
T Consensus 391 ~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 391 AATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp HHHHHHCCCCCEEECCSSSCCHH
T ss_pred HHHHHhCCCccEEECCCCCCCHH
Confidence 88888899999999999998764
No 312
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1.7e-29 Score=268.46 Aligned_cols=262 Identities=20% Similarity=0.197 Sum_probs=144.6
Q ss_pred ceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeecc
Q 003982 93 ETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMD 171 (782)
Q Consensus 93 ~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~ 171 (782)
+.++++.+.+...+. .+..+++|++|+|++|+++.+++..|.++++|++|+|++|++.. .+. +..+++|++|+|+
T Consensus 13 ~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~---~~~-~~~l~~L~~L~Ls 88 (317)
T 3o53_A 13 KIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE---TLD-LESLSTLRTLDLN 88 (317)
T ss_dssp EEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEE---EEE-ETTCTTCCEEECC
T ss_pred eEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCc---chh-hhhcCCCCEEECc
Confidence 333444444433332 23334455555555555555554445555555555555555544 111 5555566666666
Q ss_pred ccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccccCCC
Q 003982 172 NANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPI 251 (782)
Q Consensus 172 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 251 (782)
+|++++.. ..++|++|++++|++++..+. .+++|++|++++|++++.+
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~---------------------------~~~~L~~L~l~~N~l~~~~ 136 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCS---------------------------RGQGKKNIYLANNKITMLR 136 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEEC---------------------------CCSSCEEEECCSSCCCSGG
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCcc---------------------------ccCCCCEEECCCCCCCCcc
Confidence 66655432 236777777777777632221 2466777777777777765
Q ss_pred C-CCCCCCCCCEEEcCCCcCccCcchhhc-CCCCCCEEEccCCcccCCCCC-CCCCccEEEccCCcCCCCCCCCCCCCCh
Q 003982 252 P-DLSKCESLFDLSLRDNQLTGVVPASVI-SLPALLNISLQNNKLQGPYPL-FPSKVQKVSLDHNNFCKNSSDAGKPCDP 328 (782)
Q Consensus 252 ~-~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~~~-~~~~l~~L~l~~N~~~~~~~~~~~~~~~ 328 (782)
+ .+..+++|++|+|++|++++..+..+. .+++|++|++++|++++..+. .+.+|+.|+|++|++++++
T Consensus 137 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~l~~L~~L~Ls~N~l~~l~--------- 207 (317)
T 3o53_A 137 DLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFMG--------- 207 (317)
T ss_dssp GBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCEEC---------
T ss_pred chhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccccccccccCCEEECCCCcCCcch---------
Confidence 5 466777788888888887776666664 677788888888877754222 2344555555554443221
Q ss_pred hhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEeccccccc-ccC
Q 003982 329 QVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLT-GPI 407 (782)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-g~~ 407 (782)
..+..+++|+.|+|++|.|+ .+|..+..+++|++|+|++|++. +.+
T Consensus 208 --------------------------------~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~ 254 (317)
T 3o53_A 208 --------------------------------PEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTL 254 (317)
T ss_dssp --------------------------------GGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHH
T ss_pred --------------------------------hhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCH
Confidence 22333445555555555555 24555555555555555555555 455
Q ss_pred CccCCCCCCCCeEecC-CCcCCCCCC
Q 003982 408 PDGLTKLASLQNLDVS-NNNLSGKVP 432 (782)
Q Consensus 408 p~~~~~l~~L~~L~ls-~N~l~g~~p 432 (782)
|..+..++.|+.|+++ .+.++|..|
T Consensus 255 ~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 255 RDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred HHHHhccccceEEECCCchhccCCch
Confidence 5555555555555555 333444333
No 313
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=6e-29 Score=263.60 Aligned_cols=199 Identities=19% Similarity=0.216 Sum_probs=110.0
Q ss_pred CCCCCEEeccCCCCCCCCCCCccc--CCCcccCeeeccccccCCCCcccccCC-----CCCcEEEcccCcCCCCCCcccc
Q 003982 136 LTNLQVLSLSDNPNLAPWPFPNEL--TKSTSLTTLYMDNANIFGLIPDFFDSF-----SNLQNLRLSYNNFTGSLPASFA 208 (782)
Q Consensus 136 l~~L~~L~Ls~N~l~~~~~~p~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~ 208 (782)
+++|++|+|++|++.. .+|..+ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..+
T Consensus 94 l~~L~~L~L~~n~l~~--~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~- 169 (312)
T 1wwl_A 94 ISGLQELTLENLEVTG--TAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQV- 169 (312)
T ss_dssp TSCCCEEEEEEEBCBS--CCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTC-
T ss_pred cCCccEEEccCCcccc--hhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHh-
Confidence 4444444444444443 233332 4444444445555554444 4444443 455555555555543333332
Q ss_pred ccccchhhcccccCCCccccccccCCCCCcEEEeecccccCC---CCC--CCCCCCCCEEEcCCCcCcc---CcchhhcC
Q 003982 209 KSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGP---IPD--LSKCESLFDLSLRDNQLTG---VVPASVIS 280 (782)
Q Consensus 209 ~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~--~~~l~~L~~L~L~~N~l~~---~~p~~~~~ 280 (782)
.++++|++|+|++|++.+. ++. +..+++|++|+|++|+|++ .....+..
T Consensus 170 -----------------------~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~ 226 (312)
T 1wwl_A 170 -----------------------RVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAA 226 (312)
T ss_dssp -----------------------CCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHT
T ss_pred -----------------------ccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhc
Confidence 2345555555555554432 112 2555666666666666652 11233345
Q ss_pred CCCCCEEEccCCcccCCCCC----CCCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCC
Q 003982 281 LPALLNISLQNNKLQGPYPL----FPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNAC 356 (782)
Q Consensus 281 l~~L~~L~l~~N~l~~~~~~----~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (782)
+++|++|++++|++++.+|. .+.+|+.|+|++|+++.++
T Consensus 227 l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ip------------------------------------- 269 (312)
T 1wwl_A 227 RVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVP------------------------------------- 269 (312)
T ss_dssp TCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSSCC-------------------------------------
T ss_pred CCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccChhh-------------------------------------
Confidence 56666666666666654431 1346666666666664332
Q ss_pred CCCCcccccCCceeEEEccCcccccccCccccccccCCeEeccccccccc
Q 003982 357 DGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGP 406 (782)
Q Consensus 357 ~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 406 (782)
..+. ++|++|+|++|+|++. |. +..+++|++|+|++|++++.
T Consensus 270 ----~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 270 ----KGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp ----SSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred ----hhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 2222 6899999999999876 55 89999999999999999853
No 314
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=4.9e-28 Score=257.19 Aligned_cols=267 Identities=20% Similarity=0.180 Sum_probs=160.8
Q ss_pred CEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEecc
Q 003982 67 RVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLS 145 (782)
Q Consensus 67 ~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 145 (782)
+....+++.+.+...+...+..+++|++|+|++|.+++.+| .|.++++|++|+|++|+++++++ +..+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 34455555565554444445555666666666666666655 56666666666666666665554 6666666666666
Q ss_pred CCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCc
Q 003982 146 DNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLS 225 (782)
Q Consensus 146 ~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~ 225 (782)
+|++.. + ...++|++|++++|++++..+.. +++|++|++++|++++..|..+
T Consensus 89 ~n~l~~---l----~~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~------------------ 140 (317)
T 3o53_A 89 NNYVQE---L----LVGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDE------------------ 140 (317)
T ss_dssp SSEEEE---E----EECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCT------------------
T ss_pred CCcccc---c----cCCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhh------------------
Confidence 666554 1 12356666666666666654332 4566667777666664333332
Q ss_pred cccccccCCCCCcEEEeecccccCCCCC-C-CCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCCC--
Q 003982 226 GTLDVLSGMTQLRQVWLHKNQFTGPIPD-L-SKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLF-- 301 (782)
Q Consensus 226 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-- 301 (782)
..+++|++|+|++|++++..+. + ..+++|++|+|++|+|++. | ....+++|++|++++|++++.++.+
T Consensus 141 ------~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~~~~~~ 212 (317)
T 3o53_A 141 ------GCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGPEFQS 212 (317)
T ss_dssp ------GGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECGGGGG
T ss_pred ------hccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcchhhhcc
Confidence 2345555555555555554332 2 2455555555555555533 1 1223555555555555555443332
Q ss_pred CCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccc-
Q 003982 302 PSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLA- 380 (782)
Q Consensus 302 ~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~- 380 (782)
+.+|+.|+|++|+++.+ |..+..+++|+.|+|++|.+.
T Consensus 213 l~~L~~L~L~~N~l~~l-----------------------------------------~~~~~~l~~L~~L~l~~N~~~~ 251 (317)
T 3o53_A 213 AAGVTWISLRNNKLVLI-----------------------------------------EKALRFSQNLEHFDLRGNGFHC 251 (317)
T ss_dssp GTTCSEEECTTSCCCEE-----------------------------------------CTTCCCCTTCCEEECTTCCCBH
T ss_pred cCcccEEECcCCcccch-----------------------------------------hhHhhcCCCCCEEEccCCCccC
Confidence 23555555555555332 333455678999999999999
Q ss_pred cccCccccccccCCeEecc-cccccccCCccCC
Q 003982 381 GNISPAYANLTSLKNLYLQ-QNNLTGPIPDGLT 412 (782)
Q Consensus 381 ~~~p~~~~~l~~L~~L~Ls-~N~l~g~~p~~~~ 412 (782)
+.+|..+..+++|+.|+++ .+.+.|..|....
T Consensus 252 ~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~~~~ 284 (317)
T 3o53_A 252 GTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECT 284 (317)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHSSSSCCCS
T ss_pred cCHHHHHhccccceEEECCCchhccCCchhccC
Confidence 8889999999999999999 5557877766543
No 315
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.94 E-value=8.4e-27 Score=243.58 Aligned_cols=142 Identities=12% Similarity=0.057 Sum_probs=125.9
Q ss_pred hcCCCccceeecccceEEEEEEe-CCCcEEEEEEeccccCC-hhhHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 580 TDNFSEANILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMG-NKGLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 580 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
.++|++.+.||+|+||.||+|.. .+++.||||++...... ....+.+.+|++++++++||||+++++++.+.+..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 46799999999999999999965 45899999999876433 34567899999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEee
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADF 731 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~Df 731 (782)
|||+++++|.+++.. + ....++..++.|++.||+|||+ .||+||||||+||+++.++.+||+++
T Consensus 110 ~e~~~g~~L~~~l~~------~-~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~ 173 (286)
T 3uqc_A 110 AEWIRGGSLQEVADT------S-PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYP 173 (286)
T ss_dssp EECCCEEEHHHHHTT------C-CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSC
T ss_pred EEecCCCCHHHHHhc------C-CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEec
Confidence 999999999999843 1 3566789999999999999999 89999999999999999999999743
No 316
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1.5e-27 Score=268.14 Aligned_cols=171 Identities=22% Similarity=0.189 Sum_probs=121.3
Q ss_pred CCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccC
Q 003982 88 SLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLT 166 (782)
Q Consensus 88 ~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~ 166 (782)
.+++|++|+|++|.|++.+| .|..+++|++|+|++|.++++++ |..+++|++|+|++|++.. +| ..++|+
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~---l~----~~~~L~ 102 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE---LL----VGPSIE 102 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEE---EE----ECTTCC
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCC---CC----CCCCcC
Confidence 33478888888888877766 67778888888888888876655 7777888888888887665 22 236788
Q ss_pred eeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeeccc
Q 003982 167 TLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQ 246 (782)
Q Consensus 167 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~ 246 (782)
+|+|++|.|++..+. .+++|++|+|++|++++..|..+ +++++|+.|+|++|+
T Consensus 103 ~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~------------------------~~l~~L~~L~Ls~N~ 155 (487)
T 3oja_A 103 TLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDE------------------------GCRSRVQYLDLKLNE 155 (487)
T ss_dssp EEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCG------------------------GGGSSEEEEECTTSC
T ss_pred EEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhh------------------------cCCCCCCEEECCCCC
Confidence 888888888776544 35678888888888876555443 347788888888888
Q ss_pred ccCCCC-CCC-CCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccC
Q 003982 247 FTGPIP-DLS-KCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQG 296 (782)
Q Consensus 247 l~~~~~-~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 296 (782)
+++.++ .+. .+++|++|+|++|.|++..+ +..+++|+.|+|++|+|++
T Consensus 156 l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~ 205 (487)
T 3oja_A 156 IDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAF 205 (487)
T ss_dssp CCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCE
T ss_pred CCCcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCC
Confidence 887555 344 67888888888888886532 2346677777777776663
No 317
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.94 E-value=5.2e-27 Score=258.53 Aligned_cols=191 Identities=16% Similarity=0.225 Sum_probs=141.2
Q ss_pred cCCCccceeecccceEEEEEE-eCCCcEEEEEEeccccC-ChhhHHHHHHHHHHHHhcCC-CCc----------------
Q 003982 581 DNFSEANILGRGGFGVVYGGE-LPDGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVRH-RHL---------------- 641 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h-~nI---------------- 641 (782)
..|...+.||+|+||+||+|. ..+|+.||||++..... .....+.+++|+.+++.++| ++.
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 457778999999999999996 56799999999874332 23346789999999999987 211
Q ss_pred -----ceEEeEEEe-----CCeEEEEEEccCCCCHHHHHHhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeE
Q 003982 642 -----VALLGYCIN-----GSERLLVYEYMPRGTLAQHLFEWHD--HGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFI 709 (782)
Q Consensus 642 -----~~~~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iv 709 (782)
..++.++.. ....+++|+++ +++|.+++..... .....+++..+..++.|+++||+|||+ .||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcc
Confidence 111111111 22457777766 7899998864321 123457888999999999999999999 8999
Q ss_pred EcCCCCCCEEECCCCcEEEEeeccceecCCCCceeeecccccccccCccccccc-------hhhhHHHHHHHHHhccc
Q 003982 710 HRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGKH-------WMILCQMTGLIWLHGSV 780 (782)
Q Consensus 710 HrDikp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~~~~dvws~Gvv 780 (782)
||||||+|||++.++.+||+|||+++..... ....+| +.|+|||++... -...++.++||||+||+
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvi 306 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLA 306 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHH
Confidence 9999999999999999999999999876432 234567 999999988311 01245779999999986
No 318
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=3.5e-27 Score=265.25 Aligned_cols=222 Identities=21% Similarity=0.253 Sum_probs=181.8
Q ss_pred CCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCC
Q 003982 110 ANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNL 189 (782)
Q Consensus 110 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 189 (782)
..+++|++|+|++|.++++++..|.++++|++|+|++|.+.. .++ +..+++|++|+|++|.|++..+ .++|
T Consensus 31 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~---~~~-l~~l~~L~~L~Ls~N~l~~l~~-----~~~L 101 (487)
T 3oja_A 31 QSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE---TLD-LESLSTLRTLDLNNNYVQELLV-----GPSI 101 (487)
T ss_dssp TTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEE---EEE-CTTCTTCCEEECCSSEEEEEEE-----CTTC
T ss_pred ccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCC---Ccc-cccCCCCCEEEecCCcCCCCCC-----CCCc
Confidence 345689999999999999999899999999999999999887 222 8899999999999999987632 3899
Q ss_pred cEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccccCCCC-CCCCCCCCCEEEcCCC
Q 003982 190 QNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIP-DLSKCESLFDLSLRDN 268 (782)
Q Consensus 190 ~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N 268 (782)
++|++++|++++..+. .+++|+.|+|++|++++.++ .+..+++|++|+|++|
T Consensus 102 ~~L~L~~N~l~~~~~~---------------------------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 154 (487)
T 3oja_A 102 ETLHAANNNISRVSCS---------------------------RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLN 154 (487)
T ss_dssp CEEECCSSCCCCEEEC---------------------------CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTS
T ss_pred CEEECcCCcCCCCCcc---------------------------ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCC
Confidence 9999999999854332 25789999999999998766 5888999999999999
Q ss_pred cCccCcchhhc-CCCCCCEEEccCCcccCCCCCCCCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccc
Q 003982 269 QLTGVVPASVI-SLPALLNISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILS 347 (782)
Q Consensus 269 ~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (782)
.|++.+|..+. .+++|+.|+|++|.|++..+.
T Consensus 155 ~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~----------------------------------------------- 187 (487)
T 3oja_A 155 EIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQ----------------------------------------------- 187 (487)
T ss_dssp CCCEEEGGGGGGGTTTCCEEECTTSCCCEEECC-----------------------------------------------
T ss_pred CCCCcChHHHhhhCCcccEEecCCCcccccccc-----------------------------------------------
Confidence 99988888886 789999999999998864221
Q ss_pred cCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcC
Q 003982 348 DSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNL 427 (782)
Q Consensus 348 ~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l 427 (782)
..+++|++|+|++|.|++ +|+.+..+++|+.|+|++|+|++ +|..+..+++|+.|++++|++
T Consensus 188 ----------------~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l 249 (487)
T 3oja_A 188 ----------------VVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGF 249 (487)
T ss_dssp ----------------CCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCB
T ss_pred ----------------ccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCC
Confidence 124577888888888886 44558888889999999999884 677788888899999999988
Q ss_pred C-CCCC
Q 003982 428 S-GKVP 432 (782)
Q Consensus 428 ~-g~~p 432 (782)
+ +.+|
T Consensus 250 ~c~~~~ 255 (487)
T 3oja_A 250 HCGTLR 255 (487)
T ss_dssp CHHHHH
T ss_pred cCcchH
Confidence 7 4444
No 319
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.9e-25 Score=232.40 Aligned_cols=63 Identities=22% Similarity=0.235 Sum_probs=44.1
Q ss_pred EEEccCcccccccCccccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcCCCCCCCC
Q 003982 371 TINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVPDF 434 (782)
Q Consensus 371 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~ 434 (782)
.|++++|.+++..+..+. ..+|++|+|++|++++..+..|..+++|+.|+|++|++++..|.+
T Consensus 181 ~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 181 SLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp EEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTT
T ss_pred eeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCch
Confidence 444444544433333333 347888888888888766667788999999999999998877754
No 320
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.93 E-value=1.3e-25 Score=236.42 Aligned_cols=146 Identities=25% Similarity=0.372 Sum_probs=126.6
Q ss_pred hcCCCcc-ceeecccceEEEEEEe-CCCcEEEEEEeccccCChhhHHHHHHHHHHH-HhcCCCCcceEEeEEEe----CC
Q 003982 580 TDNFSEA-NILGRGGFGVVYGGEL-PDGTKIAVKRMESNTMGNKGLSEFQAEIAVL-TKVRHRHLVALLGYCIN----GS 652 (782)
Q Consensus 580 ~~~y~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~nI~~~~~~~~~----~~ 652 (782)
.++|.+. +.||+|+||.||+|.. .+++.||+|+++.. ..+.+|++++ +..+||||+++++++.. ..
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 88 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 88 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc
Confidence 4567777 7899999999999954 67899999999642 4577888888 55689999999999887 67
Q ss_pred eEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECC---CCcEEEE
Q 003982 653 ERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD---DMRAKVA 729 (782)
Q Consensus 653 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~---~~~~kL~ 729 (782)
..++||||+++|+|.+++.... ...+++.++..++.|++.||+|||+ .||+||||||+||+++. ++.+||+
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~ 162 (299)
T 3m2w_A 89 CLLIVMECLDGGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLT 162 (299)
T ss_dssp EEEEEECCCCSCBHHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEEC
T ss_pred eEEEEEeecCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEe
Confidence 7899999999999999997632 2468999999999999999999999 89999999999999998 7899999
Q ss_pred eeccceecC
Q 003982 730 DFGLVKNAP 738 (782)
Q Consensus 730 DfG~a~~~~ 738 (782)
|||++....
T Consensus 163 Dfg~a~~~~ 171 (299)
T 3m2w_A 163 DFGFAKETT 171 (299)
T ss_dssp CCTTCEECT
T ss_pred ccccccccc
Confidence 999987654
No 321
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.93 E-value=1e-29 Score=285.35 Aligned_cols=348 Identities=16% Similarity=0.159 Sum_probs=242.3
Q ss_pred CCEEEEEeCCCCCCcccCcc-ccCCccCceeecccCccCcc-----CCCCCCCCCCCEEeCCCCcccCCCC-CCCCCCC-
Q 003982 66 NRVTTISLAKSGLSGTLSPE-ISSLTQLETLSFQMNNIAGA-----IPSLANATSLQDIYLDNNNFTSVPT-GCFDGLT- 137 (782)
Q Consensus 66 ~~v~~L~l~~~~l~~~~~~~-l~~l~~L~~L~L~~N~l~~~-----~~~l~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~- 137 (782)
.++++|+|++++++...... +..+++|++|+|++|.++.. ...+..+++|++|+|++|+++.... ..+..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 36899999999998654444 78899999999999999853 2357888999999999999986332 2233444
Q ss_pred ---CCCEEeccCCCCCCCC--CCCcccCCCcccCeeeccccccCCCCcccc-----cCCCCCcEEEcccCcCCCCCCccc
Q 003982 138 ---NLQVLSLSDNPNLAPW--PFPNELTKSTSLTTLYMDNANIFGLIPDFF-----DSFSNLQNLRLSYNNFTGSLPASF 207 (782)
Q Consensus 138 ---~L~~L~Ls~N~l~~~~--~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~Ls~N~l~~~~p~~~ 207 (782)
+|++|+|++|++.... .++..+..+++|++|+|++|.++...+..+ ...++|++|+|++|++++.....+
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 7999999999988521 357788999999999999999876544333 336789999999999986443222
Q ss_pred c----c-cccchhhcccccCCCccccccc----cCCCCCcEEEeecccccCC-----CCCCCCCCCCCEEEcCCCcCccC
Q 003982 208 A----K-SDIQNLWMNDQQLGLSGTLDVL----SGMTQLRQVWLHKNQFTGP-----IPDLSKCESLFDLSLRDNQLTGV 273 (782)
Q Consensus 208 ~----~-~~l~~l~l~~~~~~~~~~~~~~----~~l~~L~~L~L~~N~l~~~-----~~~~~~l~~L~~L~L~~N~l~~~ 273 (782)
. . ..|+.|++++|.+...+..... ...++|++|++++|++++. +..+..+++|++|++++|++++.
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 242 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 242 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChH
Confidence 2 2 4677777777765433222111 1245777888888877763 22355677788888888877654
Q ss_pred c-----chhhcCCCCCCEEEccCCcccCC----CCCC---CCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCC
Q 003982 274 V-----PASVISLPALLNISLQNNKLQGP----YPLF---PSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMG 341 (782)
Q Consensus 274 ~-----p~~~~~l~~L~~L~l~~N~l~~~----~~~~---~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (782)
. +..+..+++|++|++++|++++. ++.. ..+|+.|++++|.++... ...+
T Consensus 243 ~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~-------------~~~l----- 304 (461)
T 1z7x_W 243 GMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEG-------------ARLL----- 304 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHH-------------HHHH-----
T ss_pred HHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHH-------------HHHH-----
Confidence 3 22223567788888888877753 2221 356777888777664211 0000
Q ss_pred CCcccccCcCCCCCCCCCCcccc-cCCceeEEEccCcccccc----cCccccccccCCeEecccccccccCCccCCC---
Q 003982 342 YPAILSDSWEGNNACDGWPFVTC-SQGRIITINLANKLLAGN----ISPAYANLTSLKNLYLQQNNLTGPIPDGLTK--- 413 (782)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~p~~~~-~~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~--- 413 (782)
...+. ..++|++|+|++|.+++. ++..+..+++|++|+|++|++++..+..+..
T Consensus 305 ------------------~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~ 366 (461)
T 1z7x_W 305 ------------------CETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLG 366 (461)
T ss_dssp ------------------HHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHT
T ss_pred ------------------HHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHc
Confidence 00111 125899999999999876 5677788899999999999998765554443
Q ss_pred --CCCCCeEecCCCcCCC----CCCCC---CCCcceecCCCCCCC
Q 003982 414 --LASLQNLDVSNNNLSG----KVPDF---GSNVKFTVSPGNPFI 449 (782)
Q Consensus 414 --l~~L~~L~ls~N~l~g----~~p~~---~~~~~~~~~~~n~~~ 449 (782)
.++|+.|+|++|++++ .+|.. ...+....+.+|++.
T Consensus 367 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 367 QPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp STTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred CCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 6799999999999986 55522 256777788888763
No 322
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=4.4e-25 Score=229.63 Aligned_cols=209 Identities=23% Similarity=0.252 Sum_probs=142.3
Q ss_pred CEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEecc
Q 003982 67 RVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLS 145 (782)
Q Consensus 67 ~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 145 (782)
.++.|+|++|++++..+..|..+++|++|+|++|++++.++ .|.++++|++|+|++|+++.+++..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 46777777777776555567777777777777777776665 57777777777777777777777777777777777777
Q ss_pred CCCCCCCCCCCcccCCCcccCeeeccccccCCC-CcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCC
Q 003982 146 DNPNLAPWPFPNELTKSTSLTTLYMDNANIFGL-IPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGL 224 (782)
Q Consensus 146 ~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~ 224 (782)
+|++.. ..+..+..+++|++|+|++|++++. +|..|..+++|++|+|++|++++..+..+..
T Consensus 109 ~n~l~~--~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~--------------- 171 (276)
T 2z62_A 109 ETNLAS--LENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRV--------------- 171 (276)
T ss_dssp TSCCCC--STTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHH---------------
T ss_pred CCCccc--cCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhh---------------
Confidence 777766 2333567777777777777777664 4677777777777777777776443333321
Q ss_pred ccccccccCCCCCc-EEEeecccccCCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCC
Q 003982 225 SGTLDVLSGMTQLR-QVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPY 298 (782)
Q Consensus 225 ~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 298 (782)
+..++.|. .|++++|++++.++......+|+.|+|++|+|++..+..|..+++|+.|++++|++++..
T Consensus 172 ------l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 172 ------LHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp ------HHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCT
T ss_pred ------hhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccC
Confidence 12233333 677777777776666555557777777777777666666677777777777777777543
No 323
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=5.1e-26 Score=257.87 Aligned_cols=175 Identities=16% Similarity=0.146 Sum_probs=134.5
Q ss_pred CccceeecccceEEEEEEeCCCcEEEEEEeccccCChh------hHHHHHHHHHHHHhcCCCCcceEEeEEEeCCeEEEE
Q 003982 584 SEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNK------GLSEFQAEIAVLTKVRHRHLVALLGYCINGSERLLV 657 (782)
Q Consensus 584 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~------~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 657 (782)
...+.||+|+||.||+|.. .++.+|+|+......... ..+++.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3467899999999999955 678899998755433221 245689999999999999999666666677888999
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
|||+++++|.+++.. +..++.|+++||+|||+ +||+||||||+|||++. .+||+|||+|+..
T Consensus 418 mE~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~~ 479 (540)
T 3en9_A 418 MSYINGKLAKDVIED-------------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKIS 479 (540)
T ss_dssp EECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred EECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEEC
Confidence 999999999999853 45799999999999999 89999999999999998 9999999999987
Q ss_pred CCCCcee------eecccccccccCccccccchhhhHHHHHHHHHhc
Q 003982 738 PDGKYSV------ETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHG 778 (782)
Q Consensus 738 ~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~G 778 (782)
....... .....||+.|||||++.+.. .++....|+|+..
T Consensus 480 ~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~-~~Y~~~~d~ws~v 525 (540)
T 3en9_A 480 NLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFL-EGYKSVYDRWEII 525 (540)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHH-HHHHHHCTTHHHH
T ss_pred CCccccccchhhhhhhhcCCCCcCCHHHHHHHH-HHHHHHHhHHHHH
Confidence 6532211 13457999999999988743 2566667778754
No 324
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=1.2e-24 Score=225.69 Aligned_cols=228 Identities=21% Similarity=0.233 Sum_probs=149.0
Q ss_pred ccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeee
Q 003982 90 TQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLY 169 (782)
Q Consensus 90 ~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~ 169 (782)
.++..+++..+.+.... .+..+++|++|++++|.++.++. +..+++|++|+|++|++.. + ..+..+++|++|+
T Consensus 19 ~~l~~l~l~~~~~~~~~-~~~~l~~L~~L~l~~~~i~~~~~--l~~l~~L~~L~l~~n~l~~---~-~~l~~l~~L~~L~ 91 (272)
T 3rfs_A 19 AETIKANLKKKSVTDAV-TQNELNSIDQIIANNSDIKSVQG--IQYLPNVRYLALGGNKLHD---I-SALKELTNLTYLI 91 (272)
T ss_dssp HHHHHHHHTCSCTTSEE-CHHHHTTCCEEECTTSCCCCCTT--GGGCTTCCEEECTTSCCCC---C-GGGTTCTTCCEEE
T ss_pred HHHHHHHhcCccccccc-ccccccceeeeeeCCCCcccccc--cccCCCCcEEECCCCCCCC---c-hhhcCCCCCCEEE
Confidence 34455556666555433 24455666777777776666542 5666777777777776665 2 3566677777777
Q ss_pred ccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccccC
Q 003982 170 MDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTG 249 (782)
Q Consensus 170 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~ 249 (782)
|++|.+++..+..|..+++|++|+|++|++++..+.. +.++++|++|++++|++++
T Consensus 92 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~------------------------~~~l~~L~~L~L~~n~l~~ 147 (272)
T 3rfs_A 92 LTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGV------------------------FDKLTNLTYLNLAHNQLQS 147 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTT------------------------TTTCTTCCEEECCSSCCCC
T ss_pred CCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHH------------------------hccCCCCCEEECCCCccCc
Confidence 7777777766666777777777777777776433332 2346777777777777776
Q ss_pred CCCC-CCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCCCCCCccEEEccCCcCCCCCCCCCCCCCh
Q 003982 250 PIPD-LSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDP 328 (782)
Q Consensus 250 ~~~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~~ 328 (782)
.++. +..+++|+.|++++|+|++..+..|..+++|++|++++|++++.++..
T Consensus 148 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--------------------------- 200 (272)
T 3rfs_A 148 LPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGV--------------------------- 200 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT---------------------------
T ss_pred cCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHH---------------------------
Confidence 6654 567777777777777777666666777777777777777777544321
Q ss_pred hhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccccccCC
Q 003982 329 QVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIP 408 (782)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p 408 (782)
+..+++|++|+|++|.+.+. +++|++|+++.|+++|.+|
T Consensus 201 ----------------------------------~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip 239 (272)
T 3rfs_A 201 ----------------------------------FDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVR 239 (272)
T ss_dssp ----------------------------------TTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBB
T ss_pred ----------------------------------HhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCccc
Confidence 22334566666666665533 3467888888888888888
Q ss_pred ccCCCCCC
Q 003982 409 DGLTKLAS 416 (782)
Q Consensus 409 ~~~~~l~~ 416 (782)
..++.++.
T Consensus 240 ~~~~~~~~ 247 (272)
T 3rfs_A 240 NSAGSVAP 247 (272)
T ss_dssp CTTSCBCG
T ss_pred CcccccCC
Confidence 88877654
No 325
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=7.1e-25 Score=227.37 Aligned_cols=219 Identities=19% Similarity=0.212 Sum_probs=129.8
Q ss_pred CCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEc
Q 003982 115 LQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRL 194 (782)
Q Consensus 115 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 194 (782)
+..+++..+.+..+.. ...+++|+.|++++|.+.. + ..+..+++|++|+|++|.+++. ..+..+++|++|+|
T Consensus 21 l~~l~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~---~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L 92 (272)
T 3rfs_A 21 TIKANLKKKSVTDAVT--QNELNSIDQIIANNSDIKS---V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLIL 92 (272)
T ss_dssp HHHHHHTCSCTTSEEC--HHHHTTCCEEECTTSCCCC---C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEEC
T ss_pred HHHHHhcCcccccccc--cccccceeeeeeCCCCccc---c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEEC
Confidence 3344555555544321 3455666666666666655 1 2456666666666666666653 35666666666666
Q ss_pred ccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccccCCCCC-CCCCCCCCEEEcCCCcCccC
Q 003982 195 SYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPD-LSKCESLFDLSLRDNQLTGV 273 (782)
Q Consensus 195 s~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~ 273 (782)
++|++++..+.. +.++++|++|+|++|++++.++. +..+++|++|+|++|++++.
T Consensus 93 ~~n~l~~~~~~~------------------------~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 148 (272)
T 3rfs_A 93 TGNQLQSLPNGV------------------------FDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSL 148 (272)
T ss_dssp TTSCCCCCCTTT------------------------TTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCCccCccChhH------------------------hcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCcc
Confidence 666666333322 23466666666666666665554 56666666666666666655
Q ss_pred cchhhcCCCCCCEEEccCCcccCCCCCCCCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCC
Q 003982 274 VPASVISLPALLNISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGN 353 (782)
Q Consensus 274 ~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (782)
.+..|..+++|+.|++++|++++..+.
T Consensus 149 ~~~~~~~l~~L~~L~l~~n~l~~~~~~----------------------------------------------------- 175 (272)
T 3rfs_A 149 PKGVFDKLTNLTELDLSYNQLQSLPEG----------------------------------------------------- 175 (272)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTT-----------------------------------------------------
T ss_pred CHHHhccCccCCEEECCCCCcCccCHH-----------------------------------------------------
Confidence 555666666666666666666643321
Q ss_pred CCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcCCCCCCC
Q 003982 354 NACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVPD 433 (782)
Q Consensus 354 ~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~ 433 (782)
.+..+++|++|+|++|.+++..|..|.++++|++|+|++|.+.+. ++.|+.|+++.|+++|.+|.
T Consensus 176 --------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~ 240 (272)
T 3rfs_A 176 --------VFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRN 240 (272)
T ss_dssp --------TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBC
T ss_pred --------HhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccC
Confidence 122334566666666666665555566666666666666666543 33566666666666666664
No 326
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.92 E-value=1.6e-24 Score=220.18 Aligned_cols=202 Identities=14% Similarity=0.175 Sum_probs=170.8
Q ss_pred ccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCc-ccCCCCCCCCCCCCCCEEeccC-CCCCCCCCCCc
Q 003982 81 TLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNN-FTSVPTGCFDGLTNLQVLSLSD-NPNLAPWPFPN 157 (782)
Q Consensus 81 ~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~-l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~p~ 157 (782)
.+|. +. ++|++|++++|+|+++++ .|.++++|++|+|++|+ ++.+++..|.++++|++|+|++ |++.. ..+.
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~--i~~~ 99 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTY--IDPD 99 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCE--ECTT
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeE--cCHH
Confidence 4555 33 389999999999998888 78999999999999997 9999998899999999999998 99887 4456
Q ss_pred ccCCCcccCeeeccccccCCCCcccccCCCCCc---EEEcccC-cCCCCCCccccccccchhhcccccCCCccccccccC
Q 003982 158 ELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQ---NLRLSYN-NFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSG 233 (782)
Q Consensus 158 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~ 233 (782)
.|.++++|++|++++|++++. |. |..+++|+ +|++++| +++ .+|.. .|.+
T Consensus 100 ~f~~l~~L~~L~l~~n~l~~l-p~-~~~l~~L~~L~~L~l~~N~~l~-~i~~~-----------------------~~~~ 153 (239)
T 2xwt_C 100 ALKELPLLKFLGIFNTGLKMF-PD-LTKVYSTDIFFILEITDNPYMT-SIPVN-----------------------AFQG 153 (239)
T ss_dssp SEECCTTCCEEEEEEECCCSC-CC-CTTCCBCCSEEEEEEESCTTCC-EECTT-----------------------TTTT
T ss_pred HhCCCCCCCEEeCCCCCCccc-cc-cccccccccccEEECCCCcchh-hcCcc-----------------------cccc
Confidence 788999999999999999884 55 88888888 9999999 887 44432 2456
Q ss_pred CCCCc-EEEeecccccCCCCCCCCCCCCCEEEcCCCc-CccCcchhhcCC-CCCCEEEccCCcccCCCCCCCCCccEEEc
Q 003982 234 MTQLR-QVWLHKNQFTGPIPDLSKCESLFDLSLRDNQ-LTGVVPASVISL-PALLNISLQNNKLQGPYPLFPSKVQKVSL 310 (782)
Q Consensus 234 l~~L~-~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l-~~L~~L~l~~N~l~~~~~~~~~~l~~L~l 310 (782)
+++|+ +|++++|+++..++.....++|+.|+|++|+ +++..+..|..+ ++|+.|++++|++++..+..+.+|+.|++
T Consensus 154 l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~~~~~L~~L~l 233 (239)
T 2xwt_C 154 LCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSKGLEHLKELIA 233 (239)
T ss_dssp TBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCTTCTTCSEEEC
T ss_pred hhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChhHhccCceeec
Confidence 89999 9999999999766653333899999999995 997778889999 99999999999999877777889999998
Q ss_pred cCC
Q 003982 311 DHN 313 (782)
Q Consensus 311 ~~N 313 (782)
+++
T Consensus 234 ~~~ 236 (239)
T 2xwt_C 234 RNT 236 (239)
T ss_dssp TTC
T ss_pred cCc
Confidence 876
No 327
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=2.4e-23 Score=215.68 Aligned_cols=64 Identities=25% Similarity=0.290 Sum_probs=43.9
Q ss_pred eeEEEccCcccccccCccccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcCCCCCC
Q 003982 369 IITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVP 432 (782)
Q Consensus 369 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p 432 (782)
|+.|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|++.+..+
T Consensus 159 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 159 LKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred cceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 3333334444443344456777888888888888886666678888889999888888766544
No 328
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=8.5e-24 Score=216.50 Aligned_cols=190 Identities=26% Similarity=0.349 Sum_probs=120.3
Q ss_pred CCccccceEeCCCCCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCC
Q 003982 53 GYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTG 131 (782)
Q Consensus 53 ~~c~w~gv~c~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~ 131 (782)
+||.|.|+.|.. ..+.+++++++++ .+|..+. ++|+.|+|++|.+++..+ .|.++++|++|+|++|+|+++++.
T Consensus 3 ~Cp~~~gC~C~~--~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 77 (251)
T 3m19_A 3 TCETVTGCTCNE--GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAG 77 (251)
T ss_dssp -CHHHHSSEEEG--GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTT
T ss_pred cCCCCCceEcCC--CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHh
Confidence 578999999953 2456888888887 5666554 577888888888877766 577777888888888877777777
Q ss_pred CCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccc
Q 003982 132 CFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSD 211 (782)
Q Consensus 132 ~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 211 (782)
.|.++++|++|+|++|++.. ..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|
T Consensus 78 ~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l------------ 143 (251)
T 3m19_A 78 VFDDLTELGTLGLANNQLAS--LPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQL------------ 143 (251)
T ss_dssp TTTTCTTCCEEECTTSCCCC--CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC------------
T ss_pred HhccCCcCCEEECCCCcccc--cChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcC------------
Confidence 77777777777777776665 2333445555555555555555554444444455555555555554
Q ss_pred cchhhcccccCCCccccccccCCCCCcEEEeecccccCCCC-CCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEcc
Q 003982 212 IQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIP-DLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQ 290 (782)
Q Consensus 212 l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 290 (782)
++.++ .|..+++|++|+|++|+|++..+..|..+++|+.|+++
T Consensus 144 ------------------------------------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 187 (251)
T 3m19_A 144 ------------------------------------QSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLF 187 (251)
T ss_dssp ------------------------------------CCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred ------------------------------------CccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEee
Confidence 44444 24555555555555555555555555556666666666
Q ss_pred CCcccCC
Q 003982 291 NNKLQGP 297 (782)
Q Consensus 291 ~N~l~~~ 297 (782)
+|++.+.
T Consensus 188 ~N~~~c~ 194 (251)
T 3m19_A 188 GNQFDCS 194 (251)
T ss_dssp SCCBCTT
T ss_pred CCceeCC
Confidence 6665543
No 329
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=1.2e-23 Score=220.04 Aligned_cols=200 Identities=23% Similarity=0.254 Sum_probs=154.4
Q ss_pred CCCCCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCE
Q 003982 63 DNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQV 141 (782)
Q Consensus 63 ~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 141 (782)
.+-.+++++++++++++ .+|..+. ++|+.|+|++|.|++..+ .|.++++|++|+|++|+|+.++.. ..+++|++
T Consensus 7 ~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~ 81 (290)
T 1p9a_G 7 SKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGT 81 (290)
T ss_dssp ECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCE
T ss_pred cccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCE
Confidence 33346778888888887 5666554 678888888888887766 688888888888888888887664 67888888
Q ss_pred EeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhccccc
Q 003982 142 LSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQ 221 (782)
Q Consensus 142 L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~ 221 (782)
|+|++|++.. +|..+..+++|++|+|++|+|++..+..|..+++|++|+|++|++++ +|...
T Consensus 82 L~Ls~N~l~~---l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~-~~~~~-------------- 143 (290)
T 1p9a_G 82 LDLSHNQLQS---LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT-LPPGL-------------- 143 (290)
T ss_dssp EECCSSCCSS---CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCC-CCTTT--------------
T ss_pred EECCCCcCCc---CchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCc-cChhh--------------
Confidence 8888888876 67777888888888888888888877888888888888888888873 44321
Q ss_pred CCCccccccccCCCCCcEEEeecccccCCCCC-CCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCccc
Q 003982 222 LGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPD-LSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQ 295 (782)
Q Consensus 222 ~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 295 (782)
|..+++|+.|+|++|+|+..++. |..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|++.
T Consensus 144 ---------~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 144 ---------LTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp ---------TTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred ---------cccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 34578888888888888876664 577888888888888888 66777777778888888888776
No 330
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=1.2e-23 Score=219.84 Aligned_cols=204 Identities=21% Similarity=0.213 Sum_probs=123.9
Q ss_pred CCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCC
Q 003982 109 LANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSN 188 (782)
Q Consensus 109 l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 188 (782)
+.++++|+++++++|+++.+|...+ + +++.|+|++|++++..+..|..+++
T Consensus 6 ~~~l~~l~~l~~~~~~l~~ip~~~~---~--------------------------~l~~L~L~~N~l~~~~~~~~~~l~~ 56 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTALPPDLP---K--------------------------DTTILHLSENLLYTFSLATLMPYTR 56 (290)
T ss_dssp EECSTTCCEEECTTSCCSSCCSCCC---T--------------------------TCCEEECTTSCCSEEEGGGGTTCTT
T ss_pred ccccCCccEEECCCCCCCcCCCCCC---C--------------------------CCCEEEcCCCcCCccCHHHhhcCCC
Confidence 4556666666776666666665432 3 4445555555555555555666666
Q ss_pred CcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccccCCCCCCCCCCCCCEEEcCCC
Q 003982 189 LQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDN 268 (782)
Q Consensus 189 L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N 268 (782)
|++|+|++|.+++ ++. ...+++|++|+|++|+++..+..+..+++|++|+|++|
T Consensus 57 L~~L~L~~n~l~~-~~~-------------------------~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N 110 (290)
T 1p9a_G 57 LTQLNLDRAELTK-LQV-------------------------DGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFN 110 (290)
T ss_dssp CCEEECTTSCCCE-EEC-------------------------CSCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEECCSS
T ss_pred CCEEECCCCccCc-ccC-------------------------CCCCCcCCEEECCCCcCCcCchhhccCCCCCEEECCCC
Confidence 6666666666652 221 12356666666666666655555666666667777777
Q ss_pred cCccCcchhhcCCCCCCEEEccCCcccCCCCCCCCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCccccc
Q 003982 269 QLTGVVPASVISLPALLNISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSD 348 (782)
Q Consensus 269 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (782)
+|++..|..|..+++|++|+|++|++++..+.
T Consensus 111 ~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~------------------------------------------------ 142 (290)
T 1p9a_G 111 RLTSLPLGALRGLGELQELYLKGNELKTLPPG------------------------------------------------ 142 (290)
T ss_dssp CCCCCCSSTTTTCTTCCEEECTTSCCCCCCTT------------------------------------------------
T ss_pred cCcccCHHHHcCCCCCCEEECCCCCCCccChh------------------------------------------------
Confidence 76665566666666666666666666643221
Q ss_pred CcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcCC
Q 003982 349 SWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLS 428 (782)
Q Consensus 349 ~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 428 (782)
.+..+++|+.|+|++|+|++..+..|.++++|++|+|++|+|+ .+|..+..++.|+.|+|++|++.
T Consensus 143 -------------~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 143 -------------LLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp -------------TTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred -------------hcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 1222345555555555555444445677778888888888887 67777777777777777766664
Q ss_pred C
Q 003982 429 G 429 (782)
Q Consensus 429 g 429 (782)
+
T Consensus 209 C 209 (290)
T 1p9a_G 209 C 209 (290)
T ss_dssp C
T ss_pred C
Confidence 3
No 331
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=1.4e-24 Score=229.70 Aligned_cols=203 Identities=17% Similarity=0.142 Sum_probs=132.1
Q ss_pred CCCCEEeccCCCCCCCCCCCccc--CCCcccCeeeccccccCCCCc----ccccCCCCCcEEEcccCcCCCCCCcccccc
Q 003982 137 TNLQVLSLSDNPNLAPWPFPNEL--TKSTSLTTLYMDNANIFGLIP----DFFDSFSNLQNLRLSYNNFTGSLPASFAKS 210 (782)
Q Consensus 137 ~~L~~L~Ls~N~l~~~~~~p~~~--~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 210 (782)
++|++|+|++|++.. ..|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|+|++|++++..|..+
T Consensus 91 ~~L~~L~l~~n~l~~--~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~--- 165 (310)
T 4glp_A 91 SRLKELTLEDLKITG--TMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQV--- 165 (310)
T ss_dssp SCCCEEEEESCCCBS--CCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSC---
T ss_pred CceeEEEeeCCEecc--chhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHh---
Confidence 345555555555554 344444 556666666666666655433 333456677777777777764444433
Q ss_pred ccchhhcccccCCCccccccccCCCCCcEEEeecccccC---CCC--CCCCCCCCCEEEcCCCcCccCcch----hhcCC
Q 003982 211 DIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTG---PIP--DLSKCESLFDLSLRDNQLTGVVPA----SVISL 281 (782)
Q Consensus 211 ~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~---~~~--~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l 281 (782)
+++++|++|+|++|++.+ .++ .+..+++|++|+|++|+|+. ++. .+..+
T Consensus 166 ---------------------~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l 223 (310)
T 4glp_A 166 ---------------------RAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAG 223 (310)
T ss_dssp ---------------------CCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHT
T ss_pred ---------------------ccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcC
Confidence 346777777777777654 222 24677888888888888873 333 35678
Q ss_pred CCCCEEEccCCcccCCCCCCCCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCc
Q 003982 282 PALLNISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPF 361 (782)
Q Consensus 282 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 361 (782)
++|++|+|++|++++..|..+..
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~--------------------------------------------------------- 246 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPR--------------------------------------------------------- 246 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSS---------------------------------------------------------
T ss_pred CCCCEEECCCCCCCccchhhHHh---------------------------------------------------------
Confidence 88888888888888765532211
Q ss_pred ccccCCceeEEEccCcccccccCccccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcCCC
Q 003982 362 VTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSG 429 (782)
Q Consensus 362 ~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g 429 (782)
....++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|+.|+|++|+|+.
T Consensus 247 -~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 247 -CMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp -CCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred -ccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 001246777777777777 5666664 7899999999999854 43 6778899999999999874
No 332
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=2.3e-25 Score=241.18 Aligned_cols=64 Identities=14% Similarity=0.273 Sum_probs=41.0
Q ss_pred ceeEEEccCcccccccC----ccccccccCCeEecccccccc-------cCCccCCCCCCCCeEecCCCcCCCCC
Q 003982 368 RIITINLANKLLAGNIS----PAYANLTSLKNLYLQQNNLTG-------PIPDGLTKLASLQNLDVSNNNLSGKV 431 (782)
Q Consensus 368 ~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~g-------~~p~~~~~l~~L~~L~ls~N~l~g~~ 431 (782)
+|++|+|++|.|++..+ ..+..+++|++|+|++|++.+ .++..+..+++|+.||+++|++.+..
T Consensus 226 ~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~ 300 (362)
T 3goz_A 226 HVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSH 300 (362)
T ss_dssp TCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGG
T ss_pred CceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcc
Confidence 55666666666654333 334566777777777777443 23446777788888888888876653
No 333
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=3.5e-25 Score=237.35 Aligned_cols=211 Identities=19% Similarity=0.259 Sum_probs=136.4
Q ss_pred CCCccccceEeCCCCCEEEEEeCCCCCCcccCccccCC--ccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCC-
Q 003982 52 TGYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSL--TQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSV- 128 (782)
Q Consensus 52 ~~~c~w~gv~c~~~~~v~~L~l~~~~l~~~~~~~l~~l--~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~- 128 (782)
..|..|.++.|+ ...++.++++++.+. +..+..+ ++++.|++++|.+++.++.+..+++|++|+|++|.++..
T Consensus 34 ~vc~~W~~~~~~-~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~ 109 (336)
T 2ast_B 34 GVCKRWYRLASD-ESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVST 109 (336)
T ss_dssp SSCHHHHHHHTC-STTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHH
T ss_pred HHHHHHHHHhcC-chhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHH
Confidence 355689999987 345889999999887 5567777 889999999999998888777889999999999988753
Q ss_pred CCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeecccc-ccCCC-CcccccCCCCCcEEEcccC-cCCCC-CC
Q 003982 129 PTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNA-NIFGL-IPDFFDSFSNLQNLRLSYN-NFTGS-LP 204 (782)
Q Consensus 129 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~~L~~L~Ls~N-~l~~~-~p 204 (782)
.+..+..+++|++|+|++|++.. ..+..+..+++|++|+|++| .+++. ++..+..+++|++|++++| ++++. ++
T Consensus 110 ~~~~~~~~~~L~~L~L~~~~l~~--~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~ 187 (336)
T 2ast_B 110 LHGILSQCSKLQNLSLEGLRLSD--PIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQ 187 (336)
T ss_dssp HHHHHTTBCCCSEEECTTCBCCH--HHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHH
T ss_pred HHHHHhhCCCCCEEeCcCcccCH--HHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHH
Confidence 33446677777777777776654 34555666666777777766 45532 4555666666666666666 65522 22
Q ss_pred ccccccccchhhcccccCCCccccccccCCC-CCcEEEeeccc--ccC--CCCCCCCCCCCCEEEcCCCc-CccCcchhh
Q 003982 205 ASFAKSDIQNLWMNDQQLGLSGTLDVLSGMT-QLRQVWLHKNQ--FTG--PIPDLSKCESLFDLSLRDNQ-LTGVVPASV 278 (782)
Q Consensus 205 ~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~-~L~~L~L~~N~--l~~--~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~ 278 (782)
.. +..++ +|++|++++|. ++. .+..+..+++|+.|++++|. +++..+..+
T Consensus 188 ~~------------------------~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l 243 (336)
T 2ast_B 188 VA------------------------VAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEF 243 (336)
T ss_dssp HH------------------------HHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGG
T ss_pred HH------------------------HHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHH
Confidence 21 22355 66666666653 321 11123445555555555555 444445555
Q ss_pred cCCCCCCEEEccCC
Q 003982 279 ISLPALLNISLQNN 292 (782)
Q Consensus 279 ~~l~~L~~L~l~~N 292 (782)
.++++|++|++++|
T Consensus 244 ~~l~~L~~L~l~~~ 257 (336)
T 2ast_B 244 FQLNYLQHLSLSRC 257 (336)
T ss_dssp GGCTTCCEEECTTC
T ss_pred hCCCCCCEeeCCCC
Confidence 55555555555555
No 334
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.6e-23 Score=221.55 Aligned_cols=225 Identities=22% Similarity=0.280 Sum_probs=154.6
Q ss_pred CEEEEEeCCCCCCcccCc---cccCCccCceeecccCccCccCC-CC--CCCCCCCEEeCCCCcccCCCC----CCCCCC
Q 003982 67 RVTTISLAKSGLSGTLSP---EISSLTQLETLSFQMNNIAGAIP-SL--ANATSLQDIYLDNNNFTSVPT----GCFDGL 136 (782)
Q Consensus 67 ~v~~L~l~~~~l~~~~~~---~l~~l~~L~~L~L~~N~l~~~~~-~l--~~l~~L~~L~Ls~n~l~~~~~----~~~~~l 136 (782)
+++.+.+.++.++...-. .+..+++|++|++++|.+++..| .+ ..+++|++|+|++|++++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 467777777776532111 12234568888888888887766 45 778888888888888876333 234467
Q ss_pred CCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCC---C-cccccCCCCCcEEEcccCcCCCCCCcccccccc
Q 003982 137 TNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGL---I-PDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDI 212 (782)
Q Consensus 137 ~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~---~-~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l 212 (782)
++|++|+|++|++.. ..+..+..+++|++|+|++|++.+. . +..+..+++|++|+|++|+++ .++....
T Consensus 145 ~~L~~L~Ls~n~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~---- 217 (310)
T 4glp_A 145 PGLKVLSIAQAHSPA--FSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCA---- 217 (310)
T ss_dssp SCCCEEEEECCSSCC--CCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHH----
T ss_pred cCCCEEEeeCCCcch--hhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHH----
Confidence 888888888888866 4566778888888888888887642 1 233467788888888888886 3332110
Q ss_pred chhhcccccCCCccccccccCCCCCcEEEeecccccCCC-CCCCCC---CCCCEEEcCCCcCccCcchhhcCCCCCCEEE
Q 003982 213 QNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPI-PDLSKC---ESLFDLSLRDNQLTGVVPASVISLPALLNIS 288 (782)
Q Consensus 213 ~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 288 (782)
..+.++++|++|+|++|++++.. +.+..+ ++|++|+|++|+|+ .+|..+. ++|++|+
T Consensus 218 ----------------~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~ 278 (310)
T 4glp_A 218 ----------------ALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLD 278 (310)
T ss_dssp ----------------HHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEE
T ss_pred ----------------HHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEE
Confidence 01234678888888888888763 345444 68888888888888 5666664 6888888
Q ss_pred ccCCcccC-CCCCCCCCccEEEccCCcCCC
Q 003982 289 LQNNKLQG-PYPLFPSKVQKVSLDHNNFCK 317 (782)
Q Consensus 289 l~~N~l~~-~~~~~~~~l~~L~l~~N~~~~ 317 (782)
|++|+|++ +.+..+++|+.|+|++|.|+.
T Consensus 279 Ls~N~l~~~~~~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 279 LSSNRLNRAPQPDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCSCCCCSCCCTTSCCCCSCEECSSTTTSC
T ss_pred CCCCcCCCCchhhhCCCccEEECcCCCCCC
Confidence 88888887 445556778888888887754
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=2.9e-25 Score=240.45 Aligned_cols=226 Identities=19% Similarity=0.167 Sum_probs=154.2
Q ss_pred EEEeCCCCCCcccCccccCCccCceeecccCccCccCC-----CCCCCC-CCCEEeCCCCcccCCCCCCCCCC-----CC
Q 003982 70 TISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-----SLANAT-SLQDIYLDNNNFTSVPTGCFDGL-----TN 138 (782)
Q Consensus 70 ~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-----~l~~l~-~L~~L~Ls~n~l~~~~~~~~~~l-----~~ 138 (782)
...|++++++|.+|..+...++|++|+|++|.|++..+ .|.+++ +|++|+|++|+|+......+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35778888888888877777778888888888887664 366777 88888888888888766656554 78
Q ss_pred CCEEeccCCCCCCCCCCCcc----cCCC-cccCeeeccccccCCCCccccc----C-CCCCcEEEcccCcCCCCCCcccc
Q 003982 139 LQVLSLSDNPNLAPWPFPNE----LTKS-TSLTTLYMDNANIFGLIPDFFD----S-FSNLQNLRLSYNNFTGSLPASFA 208 (782)
Q Consensus 139 L~~L~Ls~N~l~~~~~~p~~----~~~l-~~L~~L~L~~N~l~~~~~~~~~----~-l~~L~~L~Ls~N~l~~~~p~~~~ 208 (782)
|++|+|++|++.. ..+.. +..+ ++|++|+|++|++++..+..+. . .++|++|+|++|++++..+..+.
T Consensus 82 L~~L~Ls~n~l~~--~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~ 159 (362)
T 3goz_A 82 VTSLNLSGNFLSY--KSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELI 159 (362)
T ss_dssp CCEEECCSSCGGG--SCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHH
T ss_pred ccEEECcCCcCCh--HHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHH
Confidence 8888888888776 23332 3344 7788888888888777665443 3 25788888888888744433332
Q ss_pred ccccchhhcccccCCCccccccccCCC-CCcEEEeecccccCCCCC-----CCCC-CCCCEEEcCCCcCccC----cchh
Q 003982 209 KSDIQNLWMNDQQLGLSGTLDVLSGMT-QLRQVWLHKNQFTGPIPD-----LSKC-ESLFDLSLRDNQLTGV----VPAS 277 (782)
Q Consensus 209 ~~~l~~l~l~~~~~~~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~-----~~~l-~~L~~L~L~~N~l~~~----~p~~ 277 (782)
. .+..++ +|++|+|++|++++..+. +..+ ++|++|+|++|+|++. ++..
T Consensus 160 ~--------------------~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~ 219 (362)
T 3goz_A 160 Q--------------------ILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYI 219 (362)
T ss_dssp H--------------------HHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred H--------------------HHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHH
Confidence 1 122344 788888888888765542 3444 4788888888888753 4555
Q ss_pred hcC-CCCCCEEEccCCcccCCCC-------CCCCCccEEEccCCcCCC
Q 003982 278 VIS-LPALLNISLQNNKLQGPYP-------LFPSKVQKVSLDHNNFCK 317 (782)
Q Consensus 278 ~~~-l~~L~~L~l~~N~l~~~~~-------~~~~~l~~L~l~~N~~~~ 317 (782)
+.. .++|++|+|++|++++..+ ....+|+.|+|++|.+..
T Consensus 220 l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~ 267 (362)
T 3goz_A 220 FSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKN 267 (362)
T ss_dssp HHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTT
T ss_pred HhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccc
Confidence 555 3478888888888876544 223456666666665443
No 336
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.89 E-value=2.2e-22 Score=216.60 Aligned_cols=221 Identities=15% Similarity=0.168 Sum_probs=174.4
Q ss_pred CCccccceEeCCCCCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCccc-CCCC
Q 003982 53 GYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFT-SVPT 130 (782)
Q Consensus 53 ~~c~w~gv~c~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~-~~~~ 130 (782)
|.|+|..|.|++ ++|+ .+|..+ .+++++|+|++|+|+.+++ .|.++++|++|+|++|++. .++.
T Consensus 7 C~C~~~~v~C~~-----------~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~ 72 (350)
T 4ay9_X 7 CHCSNRVFLCQE-----------SKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEA 72 (350)
T ss_dssp SEEETTEEEEES-----------TTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECT
T ss_pred cEeeCCEEEecC-----------CCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccCh
Confidence 557888777753 4565 667665 3689999999999998887 6899999999999999975 4788
Q ss_pred CCCCCCCCCCE-EeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEccc-CcCCCCCCcccc
Q 003982 131 GCFDGLTNLQV-LSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSY-NNFTGSLPASFA 208 (782)
Q Consensus 131 ~~~~~l~~L~~-L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~ 208 (782)
++|.++++|++ ++++.|++.. ..|..|..+++|++|++++|+++...+..+....++..|++.+ |++. .+|...
T Consensus 73 ~~f~~L~~l~~~l~~~~N~l~~--l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~-~l~~~~- 148 (350)
T 4ay9_X 73 DVFSNLPKLHEIRIEKANNLLY--INPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH-TIERNS- 148 (350)
T ss_dssp TSBCSCTTCCEEEEEEETTCCE--ECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCC-EECTTS-
T ss_pred hHhhcchhhhhhhcccCCcccc--cCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccc-cccccc-
Confidence 88999988775 6667788888 4567889999999999999999988777777888888898866 4555 444321
Q ss_pred ccccchhhcccccCCCccccccccCC-CCCcEEEeecccccCCCCCCCCCCCCCEEEcCC-CcCccCcchhhcCCCCCCE
Q 003982 209 KSDIQNLWMNDQQLGLSGTLDVLSGM-TQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRD-NQLTGVVPASVISLPALLN 286 (782)
Q Consensus 209 ~~~l~~l~l~~~~~~~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~ 286 (782)
|..+ ..++.|+|++|+|+.+++......+|+.|++++ |.++...++.|..+++|++
T Consensus 149 ----------------------f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~ 206 (350)
T 4ay9_X 149 ----------------------FVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVI 206 (350)
T ss_dssp ----------------------STTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSE
T ss_pred ----------------------hhhcchhhhhhccccccccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccch
Confidence 2234 468899999999998877766678899999975 6677555567899999999
Q ss_pred EEccCCcccCCCCCCCCCccEEEccCC
Q 003982 287 ISLQNNKLQGPYPLFPSKVQKVSLDHN 313 (782)
Q Consensus 287 L~l~~N~l~~~~~~~~~~l~~L~l~~N 313 (782)
|++++|+|+..++..+.+|+.|.+.++
T Consensus 207 LdLs~N~l~~lp~~~~~~L~~L~~l~~ 233 (350)
T 4ay9_X 207 LDISRTRIHSLPSYGLENLKKLRARST 233 (350)
T ss_dssp EECTTSCCCCCCSSSCTTCCEEECTTC
T ss_pred hhcCCCCcCccChhhhccchHhhhccC
Confidence 999999999777767777777775544
No 337
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=3.4e-23 Score=218.70 Aligned_cols=166 Identities=21% Similarity=0.331 Sum_probs=87.8
Q ss_pred CceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeecc
Q 003982 92 LETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMD 171 (782)
Q Consensus 92 L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~ 171 (782)
+..+.+..+.++... .+..+++|++|++++|.++.++ .+..+++|++|+|++|++.. ++. +..+++|++|+|+
T Consensus 21 ~~~~~l~~~~~~~~~-~~~~l~~L~~L~l~~~~i~~l~--~~~~l~~L~~L~L~~n~i~~---~~~-~~~l~~L~~L~L~ 93 (308)
T 1h6u_A 21 AIKIAAGKSNVTDTV-TQADLDGITTLSAFGTGVTTIE--GVQYLNNLIGLELKDNQITD---LAP-LKNLTKITELELS 93 (308)
T ss_dssp HHHHHTTCSSTTSEE-CHHHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCC---CGG-GTTCCSCCEEECC
T ss_pred HHHHHhCCCCcCcee-cHHHcCCcCEEEeeCCCccCch--hhhccCCCCEEEccCCcCCC---Chh-HccCCCCCEEEcc
Confidence 333445555554432 2344566666667666666654 25566666666666666655 222 5555555555555
Q ss_pred ccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccccCCC
Q 003982 172 NANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPI 251 (782)
Q Consensus 172 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 251 (782)
+|++++. ..+..+++|++|+|++|++++ ++. +..+++|++|++++|++++.+
T Consensus 94 ~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~~~-------------------------l~~l~~L~~L~l~~n~l~~~~ 145 (308)
T 1h6u_A 94 GNPLKNV--SAIAGLQSIKTLDLTSTQITD-VTP-------------------------LAGLSNLQVLYLDLNQITNIS 145 (308)
T ss_dssp SCCCSCC--GGGTTCTTCCEEECTTSCCCC-CGG-------------------------GTTCTTCCEEECCSSCCCCCG
T ss_pred CCcCCCc--hhhcCCCCCCEEECCCCCCCC-chh-------------------------hcCCCCCCEEECCCCccCcCc
Confidence 5555553 245556666666666666552 221 223555555555555555433
Q ss_pred CCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCccc
Q 003982 252 PDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQ 295 (782)
Q Consensus 252 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 295 (782)
+ +..+++|+.|+|++|++++..+ +..+++|+.|++++|+++
T Consensus 146 ~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 186 (308)
T 1h6u_A 146 P-LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKIS 186 (308)
T ss_dssp G-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred c-ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccC
Confidence 3 4455555555555555553222 445555555555555444
No 338
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=7.6e-23 Score=207.81 Aligned_cols=213 Identities=18% Similarity=0.198 Sum_probs=127.7
Q ss_pred eecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCC-CCCCCCCCcccCCCcccCeeeccc-
Q 003982 95 LSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNP-NLAPWPFPNELTKSTSLTTLYMDN- 172 (782)
Q Consensus 95 L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~p~~~~~l~~L~~L~L~~- 172 (782)
+++..+.++.+++ +. ++|++|+|++|+++.+++..|.++++|++|+|++|+ +.. ..+..|.++++|++|+|++
T Consensus 16 ~~v~c~~l~~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~--i~~~~f~~l~~L~~L~l~~~ 90 (239)
T 2xwt_C 16 FRVTCKDIQRIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQ--LESHSFYNLSKVTHIEIRNT 90 (239)
T ss_dssp TEEEECSCSSCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCE--ECTTTEESCTTCCEEEEEEE
T ss_pred ceeEccCccccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcce--eCHhHcCCCcCCcEEECCCC
Confidence 3333334554444 32 367777777777777777767777777777777665 544 2222444444444444444
Q ss_pred cccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccccCCCC
Q 003982 173 ANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIP 252 (782)
Q Consensus 173 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 252 (782)
|+++++.+..|.. +++|++|++++|++++.+
T Consensus 91 n~l~~i~~~~f~~------------------------------------------------l~~L~~L~l~~n~l~~lp- 121 (239)
T 2xwt_C 91 RNLTYIDPDALKE------------------------------------------------LPLLKFLGIFNTGLKMFP- 121 (239)
T ss_dssp TTCCEECTTSEEC------------------------------------------------CTTCCEEEEEEECCCSCC-
T ss_pred CCeeEcCHHHhCC------------------------------------------------CCCCCEEeCCCCCCcccc-
Confidence 4444443444444 455555555555555432
Q ss_pred CCCCCCCCC---EEEcCCC-cCccCcchhhcCCCCCC-EEEccCCcccCCCCCCCCCccEEEccCCcCCCCCCCCCCCCC
Q 003982 253 DLSKCESLF---DLSLRDN-QLTGVVPASVISLPALL-NISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCD 327 (782)
Q Consensus 253 ~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~ 327 (782)
.+..+++|+ +|++++| ++++..+..|.++++|+ +|++++|+++...+.
T Consensus 122 ~~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~--------------------------- 174 (239)
T 2xwt_C 122 DLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGY--------------------------- 174 (239)
T ss_dssp CCTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTT---------------------------
T ss_pred ccccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHh---------------------------
Confidence 245555555 6666666 66655555666666676 676666666522111
Q ss_pred hhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcc-cccccCcccccc-ccCCeEecccccccc
Q 003982 328 PQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKL-LAGNISPAYANL-TSLKNLYLQQNNLTG 405 (782)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~g 405 (782)
....++|+.|+|++|. +++..+..|.++ ++|++|+|++|+|+
T Consensus 175 -----------------------------------~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~- 218 (239)
T 2xwt_C 175 -----------------------------------AFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT- 218 (239)
T ss_dssp -----------------------------------TTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCC-
T ss_pred -----------------------------------hcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccc-
Confidence 0111467777777774 776666778888 89999999999998
Q ss_pred cCCccCCCCCCCCeEecCCCc
Q 003982 406 PIPDGLTKLASLQNLDVSNNN 426 (782)
Q Consensus 406 ~~p~~~~~l~~L~~L~ls~N~ 426 (782)
.+|.. .+++|+.|+++++.
T Consensus 219 ~l~~~--~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 219 ALPSK--GLEHLKELIARNTW 237 (239)
T ss_dssp CCCCT--TCTTCSEEECTTC-
T ss_pred cCChh--HhccCceeeccCcc
Confidence 45544 67788889888764
No 339
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=6.2e-22 Score=202.64 Aligned_cols=174 Identities=24% Similarity=0.288 Sum_probs=119.6
Q ss_pred CEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcc
Q 003982 116 QDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLS 195 (782)
Q Consensus 116 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 195 (782)
++++++++.++.+|.... ++|++|+|++|++.. ..+..|.++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 17 ~~l~~~~~~l~~~p~~~~---~~l~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 17 KEVDCQGKSLDSVPSGIP---ADTEKLDLQSTGLAT--LSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp TEEECTTCCCSSCCSCCC---TTCCEEECTTSCCCC--CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred eEEecCCCCccccCCCCC---CCCCEEEccCCCcCc--cCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 344444444444443321 244444444444444 233345555555555555555555666667777777777777
Q ss_pred cCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccccCCCCC-CCCCCCCCEEEcCCCcCccCc
Q 003982 196 YNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPD-LSKCESLFDLSLRDNQLTGVV 274 (782)
Q Consensus 196 ~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~ 274 (782)
+|++++..+.. |.++++|++|+|++|++++.++. |..+++|+.|+|++|+|++..
T Consensus 92 ~n~l~~~~~~~------------------------~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 147 (251)
T 3m19_A 92 NNQLASLPLGV------------------------FDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIP 147 (251)
T ss_dssp TSCCCCCCTTT------------------------TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCcccccChhH------------------------hcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccC
Confidence 77777333332 33577778888888887776665 688999999999999999888
Q ss_pred chhhcCCCCCCEEEccCCcccCCCCCC---CCCccEEEccCCcCCCC
Q 003982 275 PASVISLPALLNISLQNNKLQGPYPLF---PSKVQKVSLDHNNFCKN 318 (782)
Q Consensus 275 p~~~~~l~~L~~L~l~~N~l~~~~~~~---~~~l~~L~l~~N~~~~~ 318 (782)
+..|..+++|++|+|++|++++..+.. +.+|+.|+|++|.+...
T Consensus 148 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 148 AGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred HHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 889999999999999999999887754 46899999999999654
No 340
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=1.5e-22 Score=200.89 Aligned_cols=188 Identities=28% Similarity=0.423 Sum_probs=137.3
Q ss_pred CCCCCccccceEeCCCCCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCC
Q 003982 50 SSTGYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSV 128 (782)
Q Consensus 50 ~~~~~c~w~gv~c~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~ 128 (782)
+..+.|.|++|.|+.. +++ .+|..+ .++|++|++++|++++.++ .|.++++|++|+|++|+++.+
T Consensus 2 p~~C~C~~~~v~c~~~-----------~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 67 (208)
T 2o6s_A 2 PSRCSCSGTTVECYSQ-----------GRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSL 67 (208)
T ss_dssp CTTCEEETTEEECCSS-----------CCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCC
T ss_pred cCCCEECCCEEEecCC-----------Ccc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCcc
Confidence 4556799999999753 333 344433 3588999999999988777 578899999999999999998
Q ss_pred CCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCcccc
Q 003982 129 PTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFA 208 (782)
Q Consensus 129 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 208 (782)
++..|.++++|++|+|++|++.. ..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..
T Consensus 68 ~~~~~~~l~~L~~L~Ls~n~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-- 143 (208)
T 2o6s_A 68 PNGVFNKLTSLTYLNLSTNQLQS--LPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGV-- 143 (208)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCC--CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT--
T ss_pred ChhhcCCCCCcCEEECCCCcCCc--cCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHH--
Confidence 88888888899999998888877 34445677888888888888887777777777788888888888777333322
Q ss_pred ccccchhhcccccCCCccccccccCCCCCcEEEeecccccCCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCC
Q 003982 209 KSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPA 283 (782)
Q Consensus 209 ~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 283 (782)
+.++++|++|++++|.+.+ .+++|+.|+++.|+++|.+|..++.++.
T Consensus 144 ----------------------~~~l~~L~~L~l~~N~~~~------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 144 ----------------------FDRLTSLQYIWLHDNPWDC------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ----------------------TTTCTTCCEEECCSCCBCC------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ----------------------hccCCCccEEEecCCCeec------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 2346777777777776653 3456666666777777666666665543
No 341
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=2.1e-22 Score=212.53 Aligned_cols=196 Identities=23% Similarity=0.430 Sum_probs=157.3
Q ss_pred CCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEecc
Q 003982 66 NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLS 145 (782)
Q Consensus 66 ~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 145 (782)
.+++.|+++++++.. ++ .+..+++|++|+|++|.+++.++ +..+++|++|+|++|+++.++ .+.++++|++|+|+
T Consensus 41 ~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~l~ 115 (308)
T 1h6u_A 41 DGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLKNVS--AIAGLQSIKTLDLT 115 (308)
T ss_dssp HTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCSCCG--GGTTCTTCCEEECT
T ss_pred CCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh-HccCCCCCEEEccCCcCCCch--hhcCCCCCCEEECC
Confidence 367888888888874 44 57888888999998888887776 888888899999888888875 47888888888988
Q ss_pred CCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCc
Q 003982 146 DNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLS 225 (782)
Q Consensus 146 ~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~ 225 (782)
+|++.. ++ .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++ ++.
T Consensus 116 ~n~l~~---~~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-------------------- 168 (308)
T 1h6u_A 116 STQITD---VT-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD-LTP-------------------- 168 (308)
T ss_dssp TSCCCC---CG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG--------------------
T ss_pred CCCCCC---ch-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC-Chh--------------------
Confidence 888877 33 38888888888888888887644 7888888888888888873 332
Q ss_pred cccccccCCCCCcEEEeecccccCCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCCC
Q 003982 226 GTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLF 301 (782)
Q Consensus 226 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~ 301 (782)
+.++++|+.|++++|++++.++ +..+++|+.|+|++|++++..+ +..+++|+.|++++|++++....+
T Consensus 169 -----l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~~~~~ 236 (308)
T 1h6u_A 169 -----LANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQPVFY 236 (308)
T ss_dssp -----GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECCCEEC
T ss_pred -----hcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecCCeee
Confidence 3458889999999999987654 7888899999999999986553 788899999999999988644433
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=3e-25 Score=242.76 Aligned_cols=205 Identities=18% Similarity=0.235 Sum_probs=122.4
Q ss_pred CCCcccCeeeccccccCC----CCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCC
Q 003982 160 TKSTSLTTLYMDNANIFG----LIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMT 235 (782)
Q Consensus 160 ~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~ 235 (782)
..+++|++|+|++|.++. .++..+..+++|++|+|++|.++...+..+... +..+. .+.+ -+..+
T Consensus 91 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~-l~~l~--~~~~--------~~~~~ 159 (386)
T 2ca6_A 91 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARA-LQELA--VNKK--------AKNAP 159 (386)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHH-HHHHH--HHHH--------HHTCC
T ss_pred hhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHH-HHHHh--hhhh--------cccCC
Confidence 455666666666666655 345666677777777777777753323222210 00000 0000 00015
Q ss_pred CCcEEEeecccccC-CCC----CCCCCCCCCEEEcCCCcCcc-----CcchhhcCCCCCCEEEccCCcccCCCCCCCCCc
Q 003982 236 QLRQVWLHKNQFTG-PIP----DLSKCESLFDLSLRDNQLTG-----VVPASVISLPALLNISLQNNKLQGPYPLFPSKV 305 (782)
Q Consensus 236 ~L~~L~L~~N~l~~-~~~----~~~~l~~L~~L~L~~N~l~~-----~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 305 (782)
+|++|+|++|+++. ..+ .+..+++|++|+|++|+|+. ..|..+..+++|+.|+|++|.+++..
T Consensus 160 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g------- 232 (386)
T 2ca6_A 160 PLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLG------- 232 (386)
T ss_dssp CCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHH-------
T ss_pred CCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHH-------
Confidence 66666666666652 222 24456667777777776662 23336666666777766666664100
Q ss_pred cEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccc---
Q 003982 306 QKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGN--- 382 (782)
Q Consensus 306 ~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~--- 382 (782)
...+|..+..+++|+.|+|++|.|++.
T Consensus 233 --------------------------------------------------~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 262 (386)
T 2ca6_A 233 --------------------------------------------------SSALAIALKSWPNLRELGLNDCLLSARGAA 262 (386)
T ss_dssp --------------------------------------------------HHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred --------------------------------------------------HHHHHHHHccCCCcCEEECCCCCCchhhHH
Confidence 001233344556777777777777765
Q ss_pred -cCcccc--ccccCCeEecccccccc----cCCccC-CCCCCCCeEecCCCcCCCCCC
Q 003982 383 -ISPAYA--NLTSLKNLYLQQNNLTG----PIPDGL-TKLASLQNLDVSNNNLSGKVP 432 (782)
Q Consensus 383 -~p~~~~--~l~~L~~L~Ls~N~l~g----~~p~~~-~~l~~L~~L~ls~N~l~g~~p 432 (782)
+|..+. .+++|++|+|++|+|++ .+|..+ .++++|+.|+|++|++++..|
T Consensus 263 ~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 263 AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 566663 48899999999999987 478777 668999999999999886543
No 343
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=2.9e-22 Score=208.03 Aligned_cols=155 Identities=13% Similarity=0.068 Sum_probs=121.3
Q ss_pred HHHHHHhcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCCh----------------hhHHHHHHHHHHHHhcC
Q 003982 574 EVLRQVTDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGN----------------KGLSEFQAEIAVLTKVR 637 (782)
Q Consensus 574 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------------~~~~~~~~E~~~l~~l~ 637 (782)
..+......|.+.+.||+|+||.||+|...+|+.||||+++...... .....+.+|++++++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 34444556677889999999999999977789999999996532111 13567899999999998
Q ss_pred CCCcceEEeEEEeCCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCC
Q 003982 638 HRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSN 717 (782)
Q Consensus 638 h~nI~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~N 717 (782)
|++++. ++.. +..++||||+++++|.+ +.. .+...++.|++.||+|||+ .||+||||||+|
T Consensus 163 ~~~v~~---~~~~-~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~N 223 (282)
T 1zar_A 163 GLAVPK---VYAW-EGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFYH---RGIVHGDLSQYN 223 (282)
T ss_dssp TSSSCC---EEEE-ETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTS
T ss_pred CCCcCe---EEec-cceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHH
Confidence 544444 4333 45699999999999988 411 2345799999999999998 899999999999
Q ss_pred EEECCCCcEEEEeeccceecCCCCceeeecccccccccCcccccc
Q 003982 718 ILIGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAGK 762 (782)
Q Consensus 718 Ill~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 762 (782)
||++ ++.+||+|||+|+. +..|+|||++..
T Consensus 224 ILl~-~~~vkl~DFG~a~~--------------~~~~~a~e~l~r 253 (282)
T 1zar_A 224 VLVS-EEGIWIIDFPQSVE--------------VGEEGWREILER 253 (282)
T ss_dssp EEEE-TTEEEECCCTTCEE--------------TTSTTHHHHHHH
T ss_pred EEEE-CCcEEEEECCCCeE--------------CCCCCHHHHHHH
Confidence 9999 99999999999863 335789998764
No 344
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=1.3e-21 Score=210.71 Aligned_cols=242 Identities=16% Similarity=0.148 Sum_probs=162.8
Q ss_pred ceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCe-eecc
Q 003982 93 ETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTT-LYMD 171 (782)
Q Consensus 93 ~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~-L~L~ 171 (782)
++++.++++++.+|..+ .+++++|+|++|+|+.+++++|.++++|++|+|++|++.+. ..+..|.++++|.. +.+.
T Consensus 12 ~~v~C~~~~Lt~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~-i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVTEIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEV-IEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCCSCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCE-ECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCCccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCc-cChhHhhcchhhhhhhccc
Confidence 46788999999776655 36899999999999999999999999999999999998662 12346788888764 6667
Q ss_pred ccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeec-ccccCC
Q 003982 172 NANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHK-NQFTGP 250 (782)
Q Consensus 172 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~-N~l~~~ 250 (782)
.|+|+.+.|..|..+++|++|++++|+++...+..+ ....++..|++.+ |+++..
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~------------------------~~~~~l~~l~l~~~~~i~~l 144 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHK------------------------IHSLQKVLLDIQDNINIHTI 144 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTT------------------------CCBSSCEEEEEESCTTCCEE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhh------------------------cccchhhhhhhccccccccc
Confidence 788888888888889999999999998883333222 2356677777755 566655
Q ss_pred CC-CCCCC-CCCCEEEcCCCcCccCcchhhcCCCCCCEEEccC-CcccCCCCCCCCCccEEEccCCcCCCCCCCCCCCCC
Q 003982 251 IP-DLSKC-ESLFDLSLRDNQLTGVVPASVISLPALLNISLQN-NKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCD 327 (782)
Q Consensus 251 ~~-~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~ 327 (782)
++ .|..+ ..++.|+|++|+|+. +|......++|+.|++++ |.++...+.
T Consensus 145 ~~~~f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~--------------------------- 196 (350)
T 4ay9_X 145 ERNSFVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPND--------------------------- 196 (350)
T ss_dssp CTTSSTTSBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTT---------------------------
T ss_pred cccchhhcchhhhhhccccccccC-CChhhccccchhHHhhccCCcccCCCHH---------------------------
Confidence 54 35554 357778888888874 444444456677777764 444422111
Q ss_pred hhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccccccC
Q 003982 328 PQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPI 407 (782)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~ 407 (782)
.+..+++|++|||++|+|+...+..|.+ |+.|.+.++.-...+
T Consensus 197 ----------------------------------~f~~l~~L~~LdLs~N~l~~lp~~~~~~---L~~L~~l~~~~l~~l 239 (350)
T 4ay9_X 197 ----------------------------------VFHGASGPVILDISRTRIHSLPSYGLEN---LKKLRARSTYNLKKL 239 (350)
T ss_dssp ----------------------------------TTTTEECCSEEECTTSCCCCCCSSSCTT---CCEEECTTCTTCCCC
T ss_pred ----------------------------------HhccCcccchhhcCCCCcCccChhhhcc---chHhhhccCCCcCcC
Confidence 2334456677777777776443334443 444443333333356
Q ss_pred CccCCCCCCCCeEecCCCcC
Q 003982 408 PDGLTKLASLQNLDVSNNNL 427 (782)
Q Consensus 408 p~~~~~l~~L~~L~ls~N~l 427 (782)
|. +..+++|+.++++++.-
T Consensus 240 P~-l~~l~~L~~l~l~~~~~ 258 (350)
T 4ay9_X 240 PT-LEKLVALMEASLTYPSH 258 (350)
T ss_dssp CC-TTTCCSCCEEECSCHHH
T ss_pred CC-chhCcChhhCcCCCCcc
Confidence 63 67777788888776543
No 345
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=6.9e-22 Score=223.87 Aligned_cols=192 Identities=21% Similarity=0.300 Sum_probs=162.6
Q ss_pred cccce-EeCCCCCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCC
Q 003982 56 EWTGI-NCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFD 134 (782)
Q Consensus 56 ~w~gv-~c~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~ 134 (782)
.|.|+ .|.. .+++.|+|++|+|++ +|..+. ++|++|+|++|+|+.++ ..+++|++|+|++|+|+++|. +.
T Consensus 49 ~~~~l~~C~~-~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~~ip---~~l~~L~~L~Ls~N~l~~ip~--l~ 119 (571)
T 3cvr_A 49 AVSLLKECLI-NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALISLP---ELPASLEYLDACDNRLSTLPE--LP 119 (571)
T ss_dssp HHHHHHHHHH-TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCSCCC---CCCTTCCEEECCSSCCSCCCC--CC
T ss_pred hhhhcccccc-CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCcccc---cccCCCCEEEccCCCCCCcch--hh
Confidence 79999 6864 479999999999997 887664 88999999999999554 567999999999999999887 55
Q ss_pred CCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccch
Q 003982 135 GLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQN 214 (782)
Q Consensus 135 ~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~ 214 (782)
+ +|++|+|++|++.. +|. .+++|+.|+|++|+|+++ |. .+++|++|+|++|+|++ +|. +
T Consensus 120 ~--~L~~L~Ls~N~l~~---lp~---~l~~L~~L~Ls~N~l~~l-p~---~l~~L~~L~Ls~N~L~~-lp~-l------- 178 (571)
T 3cvr_A 120 A--SLKHLDVDNNQLTM---LPE---LPALLEYINADNNQLTML-PE---LPTSLEVLSVRNNQLTF-LPE-L------- 178 (571)
T ss_dssp T--TCCEEECCSSCCSC---CCC---CCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSC-CCC-C-------
T ss_pred c--CCCEEECCCCcCCC---CCC---cCccccEEeCCCCccCcC-CC---cCCCcCEEECCCCCCCC-cch-h-------
Confidence 4 99999999999988 565 689999999999999985 54 57899999999999994 775 4
Q ss_pred hhcccccCCCccccccccCCCCCcEEEeecccccCCCCCCCCCCCC-------CEEEcCCCcCccCcchhhcCCCCCCEE
Q 003982 215 LWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESL-------FDLSLRDNQLTGVVPASVISLPALLNI 287 (782)
Q Consensus 215 l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L-------~~L~L~~N~l~~~~p~~~~~l~~L~~L 287 (782)
.++|+.|+|++|+|+..+. +.. +| +.|+|++|+|+ .+|..+..+++|+.|
T Consensus 179 -------------------~~~L~~L~Ls~N~L~~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L 235 (571)
T 3cvr_A 179 -------------------PESLEALDVSTNLLESLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTI 235 (571)
T ss_dssp -------------------CTTCCEEECCSSCCSSCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEE
T ss_pred -------------------hCCCCEEECcCCCCCchhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEE
Confidence 1789999999999996665 554 77 99999999999 688888889999999
Q ss_pred EccCCcccCCCCC
Q 003982 288 SLQNNKLQGPYPL 300 (782)
Q Consensus 288 ~l~~N~l~~~~~~ 300 (782)
+|++|+|++.+|.
T Consensus 236 ~L~~N~l~~~~p~ 248 (571)
T 3cvr_A 236 ILEDNPLSSRIRE 248 (571)
T ss_dssp ECCSSSCCHHHHH
T ss_pred EeeCCcCCCcCHH
Confidence 9999999986664
No 346
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=1.3e-23 Score=229.75 Aligned_cols=250 Identities=19% Similarity=0.210 Sum_probs=194.7
Q ss_pred ccCccccCCccCceeecccCccCccCC-----CCCCCCCCCEEeCCCCcccCC----CCCC------CCCCCCCCEEecc
Q 003982 81 TLSPEISSLTQLETLSFQMNNIAGAIP-----SLANATSLQDIYLDNNNFTSV----PTGC------FDGLTNLQVLSLS 145 (782)
Q Consensus 81 ~~~~~l~~l~~L~~L~L~~N~l~~~~~-----~l~~l~~L~~L~Ls~n~l~~~----~~~~------~~~l~~L~~L~Ls 145 (782)
.++..+..+++|++|+|++|.|+...+ .|..+++|++|+|++|.+..+ |... +.++++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 566778889999999999999987533 478899999999999766543 2222 3688999999999
Q ss_pred CCCCCCCC--CCCcccCCCcccCeeeccccccCCCCcccc----cCC---------CCCcEEEcccCcCC-CCCCccccc
Q 003982 146 DNPNLAPW--PFPNELTKSTSLTTLYMDNANIFGLIPDFF----DSF---------SNLQNLRLSYNNFT-GSLPASFAK 209 (782)
Q Consensus 146 ~N~l~~~~--~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~----~~l---------~~L~~L~Ls~N~l~-~~~p~~~~~ 209 (782)
+|++.... .+|..+..+++|++|+|++|.++...+..+ ..+ ++|++|+|++|+++ +.+|. +.
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~-l~- 180 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKE-WA- 180 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHH-HH-
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHH-HH-
Confidence 99987722 145678889999999999999975444444 334 89999999999997 33332 11
Q ss_pred cccchhhcccccCCCccccccccCCCCCcEEEeeccccc--C---CCC-CCCCCCCCCEEEcCCCcCc----cCcchhhc
Q 003982 210 SDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFT--G---PIP-DLSKCESLFDLSLRDNQLT----GVVPASVI 279 (782)
Q Consensus 210 ~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~--~---~~~-~~~~l~~L~~L~L~~N~l~----~~~p~~~~ 279 (782)
..+..+++|++|+|++|+++ + ..+ .+..+++|++|+|++|+|+ +.+|..+.
T Consensus 181 -------------------~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~ 241 (386)
T 2ca6_A 181 -------------------KTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALK 241 (386)
T ss_dssp -------------------HHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGG
T ss_pred -------------------HHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHc
Confidence 12445889999999999998 3 344 6889999999999999996 67889999
Q ss_pred CCCCCCEEEccCCcccCCCCCCCCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCC
Q 003982 280 SLPALLNISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGW 359 (782)
Q Consensus 280 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (782)
.+++|++|+|++|++++.... .+
T Consensus 242 ~~~~L~~L~L~~n~i~~~~~~---------------------------------------------------------~l 264 (386)
T 2ca6_A 242 SWPNLRELGLNDCLLSARGAA---------------------------------------------------------AV 264 (386)
T ss_dssp GCTTCCEEECTTCCCCHHHHH---------------------------------------------------------HH
T ss_pred cCCCcCEEECCCCCCchhhHH---------------------------------------------------------HH
Confidence 999999999999998742110 01
Q ss_pred Cccc--ccCCceeEEEccCccccc----ccCccc-cccccCCeEecccccccccCC
Q 003982 360 PFVT--CSQGRIITINLANKLLAG----NISPAY-ANLTSLKNLYLQQNNLTGPIP 408 (782)
Q Consensus 360 p~~~--~~~~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~Ls~N~l~g~~p 408 (782)
|..+ +.+++|++|+|++|.|++ .+|..+ .++++|++|+|++|++++..+
T Consensus 265 ~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 265 VDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 2222 235789999999999998 588877 678999999999999997764
No 347
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=5.1e-21 Score=216.76 Aligned_cols=45 Identities=18% Similarity=0.254 Sum_probs=25.5
Q ss_pred eeEEEccCcccccccCccccccccCCeEecccccccccCCccCCCC
Q 003982 369 IITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKL 414 (782)
Q Consensus 369 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 414 (782)
|+.|+|++|.|+ .+|..+..+++|++|+|++|+|++.+|..|..+
T Consensus 209 L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 209 EIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp CEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred ceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 355555555555 355555556666666666666666555555443
No 348
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.85 E-value=4.7e-23 Score=220.81 Aligned_cols=251 Identities=16% Similarity=0.157 Sum_probs=168.2
Q ss_pred cCceeecccCccCccCCCCCCC--CCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCee
Q 003982 91 QLETLSFQMNNIAGAIPSLANA--TSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTL 168 (782)
Q Consensus 91 ~L~~L~L~~N~l~~~~~~l~~l--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L 168 (782)
.++.|++++|.+.. ..+..+ ++++.|++++|.+++.++. +..+++|++|+|++|.+... .++..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~~--~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~-~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLHP--DVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVS-TLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCCH--HHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHH-HHHHHHTTBCCCSEE
T ss_pred hheeeccccccCCH--HHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHH-HHHHHHhhCCCCCEE
Confidence 36778888887762 234455 7788888888888877666 44678888888888876541 145567777888888
Q ss_pred eccccccCCCCcccccCCCCCcEEEcccC-cCCCC-CCccccccccchhhcccccCCCccccccccCCCCCcEEEeecc-
Q 003982 169 YMDNANIFGLIPDFFDSFSNLQNLRLSYN-NFTGS-LPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKN- 245 (782)
Q Consensus 169 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N- 245 (782)
+|++|.+++..+..+..+++|++|+|++| .+++. ++.. +.++++|++|++++|
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~------------------------~~~~~~L~~L~l~~~~ 179 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTL------------------------LSSCSRLDELNLSWCF 179 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHH------------------------HHHCTTCCEEECCCCT
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHH------------------------HhcCCCCCEEcCCCCC
Confidence 88888777766777777888888888887 55531 2222 234677888888877
Q ss_pred cccCC--CCCCCCCC-CCCEEEcCCC--cCc-cCcchhhcCCCCCCEEEccCCc-ccCCCCCCCCCccEEEccCCcCCCC
Q 003982 246 QFTGP--IPDLSKCE-SLFDLSLRDN--QLT-GVVPASVISLPALLNISLQNNK-LQGPYPLFPSKVQKVSLDHNNFCKN 318 (782)
Q Consensus 246 ~l~~~--~~~~~~l~-~L~~L~L~~N--~l~-~~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l~~L~l~~N~~~~~ 318 (782)
++++. +..+..++ +|++|+|++| .++ +.+|..+..+++|++|++++|. +++..
T Consensus 180 ~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~-------------------- 239 (336)
T 2ast_B 180 DFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDC-------------------- 239 (336)
T ss_dssp TCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGG--------------------
T ss_pred CcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHH--------------------
Confidence 77652 22356677 7888888777 454 3566667777777777777777 44321
Q ss_pred CCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcc-cccccCccccccccCCeEe
Q 003982 319 SSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKL-LAGNISPAYANLTSLKNLY 397 (782)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~ 397 (782)
+..+..+++|++|++++|. +.......++++++|++|+
T Consensus 240 -----------------------------------------~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ 278 (336)
T 2ast_B 240 -----------------------------------------FQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQ 278 (336)
T ss_dssp -----------------------------------------GGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEE
T ss_pred -----------------------------------------HHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEe
Confidence 1234445678888888874 3322223577888889999
Q ss_pred cccccccccCCccCCCC-CCCCeEecCCCcCCCCCCCC
Q 003982 398 LQQNNLTGPIPDGLTKL-ASLQNLDVSNNNLSGKVPDF 434 (782)
Q Consensus 398 Ls~N~l~g~~p~~~~~l-~~L~~L~ls~N~l~g~~p~~ 434 (782)
|++| ++. +.+..+ ..|+.|++++|++++..|..
T Consensus 279 l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~ 312 (336)
T 2ast_B 279 VFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARPT 312 (336)
T ss_dssp CTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCSS
T ss_pred ccCc-cCH---HHHHHHHhhCcceEEecccCccccCCc
Confidence 9888 332 233333 34777788899998888853
No 349
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.85 E-value=7.6e-24 Score=245.32 Aligned_cols=350 Identities=14% Similarity=0.059 Sum_probs=208.8
Q ss_pred CEEEEEeCCCC-CCc-ccCccccCCccCceeecccCccCccCC-----CCCCCCCCCEEeCCCCcccCCCCC----CCCC
Q 003982 67 RVTTISLAKSG-LSG-TLSPEISSLTQLETLSFQMNNIAGAIP-----SLANATSLQDIYLDNNNFTSVPTG----CFDG 135 (782)
Q Consensus 67 ~v~~L~l~~~~-l~~-~~~~~l~~l~~L~~L~L~~N~l~~~~~-----~l~~l~~L~~L~Ls~n~l~~~~~~----~~~~ 135 (782)
++++|+|+++. ++. .++..+..+++|++|+|++|.+++... .+.++++|++|+|++|.++.+... .+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 48888888876 221 122234477889999999988865532 245678888889988888744432 2456
Q ss_pred CCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccC---CCCcccccCCCCCcEEEcccCcCCCCCCccccc-cc
Q 003982 136 LTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIF---GLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAK-SD 211 (782)
Q Consensus 136 l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~---~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~ 211 (782)
+++|++|+|++|.+.. +|..+..+++|+.|+++.+... ...+..+..+++|+.|+++++... .+|..+.. .+
T Consensus 219 ~~~L~~L~L~~~~~~~---l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~ 294 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE---LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQ 294 (592)
T ss_dssp CTTCCEEECSSCBGGG---GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGG
T ss_pred CCCCcEEeccCccHHH---HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCC
Confidence 7888888888887776 5677778888888888753332 233455667777888887775433 55555443 46
Q ss_pred cchhhcccccCCCccccccccCCCCCcEEEeecccccC-CCCC-CCCCCCCCEEEcC-----------CCcCccCc-chh
Q 003982 212 IQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTG-PIPD-LSKCESLFDLSLR-----------DNQLTGVV-PAS 277 (782)
Q Consensus 212 l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~-~~~l~~L~~L~L~-----------~N~l~~~~-p~~ 277 (782)
|++|++++|.+...+....+.++++|++|+++ |.++. ..+. +..+++|++|+|+ .|.+++.. +..
T Consensus 295 L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l 373 (592)
T 3ogk_B 295 IRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIAL 373 (592)
T ss_dssp CCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHH
T ss_pred CcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHH
Confidence 77777777775444333445677888888887 44432 2222 3456778888888 35666442 233
Q ss_pred hcCCCCCCEEEccCCcccCCCCC----CCCCccEEEcc----CCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccC
Q 003982 278 VISLPALLNISLQNNKLQGPYPL----FPSKVQKVSLD----HNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDS 349 (782)
Q Consensus 278 ~~~l~~L~~L~l~~N~l~~~~~~----~~~~l~~L~l~----~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (782)
+..+++|++|+++.|++++..+. ...+|+.|+++ .|.+++.+. +.....+ .........+...
T Consensus 374 ~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~------~~~~~~~---~~~~~~L~~L~L~ 444 (592)
T 3ogk_B 374 AQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPL------DNGVRSL---LIGCKKLRRFAFY 444 (592)
T ss_dssp HHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCC------HHHHHHH---HHHCTTCCEEEEE
T ss_pred HhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchH------HHHHHHH---HHhCCCCCEEEEe
Confidence 44577888888877777764332 24567888875 555544320 0001111 0001111111111
Q ss_pred cCCCCCCCCCCcccc-cCCceeEEEccCccccc-ccCccccccccCCeEeccccccccc-CCccCCCCCCCCeEecCCCc
Q 003982 350 WEGNNACDGWPFVTC-SQGRIITINLANKLLAG-NISPAYANLTSLKNLYLQQNNLTGP-IPDGLTKLASLQNLDVSNNN 426 (782)
Q Consensus 350 ~~~~~~~~~~p~~~~-~~~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~-~p~~~~~l~~L~~L~ls~N~ 426 (782)
+..+...+..+..+. .+++|++|+|++|.+++ .++..+.++++|++|+|++|++++. ++..+..+++|+.|+|++|+
T Consensus 445 ~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 445 LRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp CCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred cCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCc
Confidence 000000001111111 24667778888777776 3445556777788888888877654 34444567777888888887
Q ss_pred CCCC
Q 003982 427 LSGK 430 (782)
Q Consensus 427 l~g~ 430 (782)
+++.
T Consensus 525 it~~ 528 (592)
T 3ogk_B 525 ASMT 528 (592)
T ss_dssp CCTT
T ss_pred CCHH
Confidence 7654
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=1.1e-20 Score=187.49 Aligned_cols=104 Identities=26% Similarity=0.340 Sum_probs=48.9
Q ss_pred ceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccc
Q 003982 93 ETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDN 172 (782)
Q Consensus 93 ~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~ 172 (782)
+.++++++.++.++..+ .++|++|+|++|+++.+++..|.++++|++|+|++|++.. ..+..|..+++|++|+|++
T Consensus 10 ~~v~c~~~~l~~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 10 TTVECYSQGRTSVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQS--LPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp TEEECCSSCCSSCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC--CCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCccCCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCc--cChhhcCCCCCcCEEECCC
Confidence 34555555555444333 2456666666666665555555555555555555555544 1222233444444444444
Q ss_pred cccCCCCcccccCCCCCcEEEcccCcCC
Q 003982 173 ANIFGLIPDFFDSFSNLQNLRLSYNNFT 200 (782)
Q Consensus 173 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 200 (782)
|++++..+..|..+++|++|+|++|+++
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 113 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQ 113 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCc
Confidence 4444333333333344444444444333
No 351
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.83 E-value=3e-20 Score=187.02 Aligned_cols=152 Identities=22% Similarity=0.303 Sum_probs=138.4
Q ss_pred CCCCCccccceEeCCC----------CCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEE
Q 003982 50 SSTGYCEWTGINCDNS----------NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDI 118 (782)
Q Consensus 50 ~~~~~c~w~gv~c~~~----------~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L 118 (782)
.+.+.|+|++|.|+.. .+++.|+|++|.+++..|..|..+++|++|+|++|+|+.+++ .|.++++|++|
T Consensus 14 ~~~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L 93 (229)
T 3e6j_A 14 PSQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVL 93 (229)
T ss_dssp CTTCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEE
Confidence 4668899999999852 368899999999999889999999999999999999988877 57899999999
Q ss_pred eCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCc
Q 003982 119 YLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNN 198 (782)
Q Consensus 119 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 198 (782)
+|++|+|+.+++..|..+++|++|+|++|++.. +|..+..+++|++|+|++|+|++..+..|..+++|++|+|++|.
T Consensus 94 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~---lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 170 (229)
T 3e6j_A 94 DLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTE---LPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNP 170 (229)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCS---CCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred ECCCCcCCccChhHhCcchhhCeEeccCCcccc---cCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCC
Confidence 999999999999999999999999999999997 78889999999999999999999888889999999999999999
Q ss_pred CCCCCC
Q 003982 199 FTGSLP 204 (782)
Q Consensus 199 l~~~~p 204 (782)
+.+..+
T Consensus 171 ~~c~c~ 176 (229)
T 3e6j_A 171 WDCECR 176 (229)
T ss_dssp BCTTBG
T ss_pred ccCCcc
Confidence 986544
No 352
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.83 E-value=5.2e-20 Score=210.90 Aligned_cols=196 Identities=20% Similarity=0.302 Sum_probs=158.4
Q ss_pred EeCCCCCCcccCccccCCccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCC
Q 003982 72 SLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLA 151 (782)
Q Consensus 72 ~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 151 (782)
.+..+.+...++ +..|++|+.|++++|.|... +.+..+++|++|+|++|+|+++++ +..+++|++|+|++|++..
T Consensus 27 ~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~ 101 (605)
T 1m9s_A 27 NLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-QGIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD 101 (605)
T ss_dssp HTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-TTGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred hccCCCcccccc--hhcCCCCCEEECcCCCCCCC-hHHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC
Confidence 344445543332 56788899999999998865 468889999999999999998877 8889999999999998887
Q ss_pred CCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccc
Q 003982 152 PWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVL 231 (782)
Q Consensus 152 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~ 231 (782)
+| .+..+++|+.|+|++|+|+++ ..+..+++|+.|+|++|+|++. .. +
T Consensus 102 ---l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~------------------------l 149 (605)
T 1m9s_A 102 ---LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TV------------------------L 149 (605)
T ss_dssp ---CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GG------------------------G
T ss_pred ---Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hh------------------------h
Confidence 33 688899999999999999875 4588899999999999998843 22 4
Q ss_pred cCCCCCcEEEeecccccCCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCCCCCCccE
Q 003982 232 SGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPSKVQK 307 (782)
Q Consensus 232 ~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 307 (782)
..+++|+.|+|++|+|++.++ +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++.+...+..+..
T Consensus 150 ~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~~ 222 (605)
T 1m9s_A 150 SRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSNLVV 222 (605)
T ss_dssp GSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCSSCEE
T ss_pred cccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcccccccEEe
Confidence 568999999999999998777 88899999999999999964 46889999999999999998765555554443
No 353
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=3.6e-20 Score=193.65 Aligned_cols=180 Identities=21% Similarity=0.310 Sum_probs=146.6
Q ss_pred ccCCccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCccc
Q 003982 86 ISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSL 165 (782)
Q Consensus 86 l~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L 165 (782)
+..+++|+.|++++|.++.. +.+..+++|++|+|++|+++++++ +.++++|++|+|++|++.. + ..+..+++|
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~---~-~~l~~l~~L 114 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD---L-SSLKDLKKL 114 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC---G-GGGTTCTTC
T ss_pred hhhcCcccEEEccCCCcccC-hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC---C-hhhccCCCC
Confidence 45678888888888888765 457788888888888888888776 8888888888888888877 3 348888889
Q ss_pred CeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecc
Q 003982 166 TTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKN 245 (782)
Q Consensus 166 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N 245 (782)
++|+|++|++++. ..+..+++|++|++++|++++ + .. +..+++|++|++++|
T Consensus 115 ~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~-~-~~------------------------l~~l~~L~~L~L~~N 166 (291)
T 1h6t_A 115 KSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITD-I-TV------------------------LSRLTKLDTLSLEDN 166 (291)
T ss_dssp CEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCC-C-GG------------------------GGGCTTCSEEECCSS
T ss_pred CEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCc-c-hh------------------------hccCCCCCEEEccCC
Confidence 9999999988875 468888999999999999884 3 22 446899999999999
Q ss_pred cccCCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCCCCC
Q 003982 246 QFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPS 303 (782)
Q Consensus 246 ~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 303 (782)
++++.++ +..+++|+.|+|++|+|++. | .+..+++|+.|++++|+++........
T Consensus 167 ~l~~~~~-l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~~~~~~~~ 221 (291)
T 1h6t_A 167 QISDIVP-LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNKPINHQS 221 (291)
T ss_dssp CCCCCGG-GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEECCCEECCS
T ss_pred ccccchh-hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccCCcccccc
Confidence 9998766 88899999999999999954 4 488999999999999999875444433
No 354
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.82 E-value=3.7e-21 Score=226.02 Aligned_cols=235 Identities=20% Similarity=0.199 Sum_probs=125.5
Q ss_pred cchhHHHHHHHHHhcCCC----CCCCCCCCCCCCccccceEeCCCCCEEEEEeCCCCCCcccCccccCCccCceeecccC
Q 003982 25 LGDDGSVMLKLAQSLQNL----PSDWSSTSSTGYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMN 100 (782)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~----~~~w~~~~~~~~c~w~gv~c~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N 100 (782)
...++++|.++..+.... ...|.. ..+..+.|.++.++. .+++.|+|.++++.. ++. ..|+.++|+.|
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~-~~~~~l~L~~n~~~~-~~~-----~~l~~l~Ls~~ 201 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTG-DSTPSGTATNSAVST-PLTPKIELFANGKDE-ANQ-----ALLQHKKLSQY 201 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcC-CCCccccCCCceecC-CccceEEeeCCCCCc-chh-----hHhhcCccCcc
Confidence 356778888888776322 223432 334567899998876 579999999999875 232 33556666666
Q ss_pred ccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCc
Q 003982 101 NIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIP 180 (782)
Q Consensus 101 ~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 180 (782)
.|.+ ++++.|++. +++..|..+++|+.|+|++|++.. +|..+..+++|++|+|++|.|+ .+|
T Consensus 202 ~i~~-------------~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~~---l~~~~~~l~~L~~L~Ls~N~l~-~lp 263 (727)
T 4b8c_D 202 SIDE-------------DDDIENRMV-MPKDSKYDDQLWHALDLSNLQIFN---ISANIFKYDFLTRLYLNGNSLT-ELP 263 (727)
T ss_dssp ----------------------------------CCCCCCEEECTTSCCSC---CCGGGGGCCSCSCCBCTTSCCS-CCC
T ss_pred cccC-------------cccccccee-cChhhhccCCCCcEEECCCCCCCC---CChhhcCCCCCCEEEeeCCcCc-ccC
Confidence 6553 244455555 556667778888888888888776 6777778888888899888888 568
Q ss_pred ccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccccCCCCCCCCCCCC
Q 003982 181 DFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESL 260 (782)
Q Consensus 181 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L 260 (782)
..|..+++|++|+|++|+|+ .+|..|. ++++|++|+|++|.|+.++..|..+++|
T Consensus 264 ~~~~~l~~L~~L~Ls~N~l~-~lp~~~~------------------------~l~~L~~L~L~~N~l~~lp~~~~~l~~L 318 (727)
T 4b8c_D 264 AEIKNLSNLRVLDLSHNRLT-SLPAELG------------------------SCFQLKYFYFFDNMVTTLPWEFGNLCNL 318 (727)
T ss_dssp GGGGGGTTCCEEECTTSCCS-SCCSSGG------------------------GGTTCSEEECCSSCCCCCCSSTTSCTTC
T ss_pred hhhhCCCCCCEEeCcCCcCC-ccChhhc------------------------CCCCCCEEECCCCCCCccChhhhcCCCc
Confidence 88899999999999999998 7887654 4889999999999998776679999999
Q ss_pred CEEEcCCCcCccCcchhhcCCCC-CCEEEccCCcccCCCCCCCCCccEEEccCC
Q 003982 261 FDLSLRDNQLTGVVPASVISLPA-LLNISLQNNKLQGPYPLFPSKVQKVSLDHN 313 (782)
Q Consensus 261 ~~L~L~~N~l~~~~p~~~~~l~~-L~~L~l~~N~l~~~~~~~~~~l~~L~l~~N 313 (782)
++|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|. .|+.|++++|
T Consensus 319 ~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~---~l~~l~l~~n 369 (727)
T 4b8c_D 319 QFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH---ERRFIEINTD 369 (727)
T ss_dssp CCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---C---------
T ss_pred cEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc---ccceeEeecc
Confidence 99999999999999988876532 23478899999887664 3445555554
No 355
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.82 E-value=2.9e-22 Score=231.99 Aligned_cols=342 Identities=15% Similarity=0.117 Sum_probs=193.0
Q ss_pred CCEEEEEeCCCCCCcc----cCccccCCccCceeecccCccCccC----C-CCCCCCCCCEEeCCCCcccCCCCCCCCCC
Q 003982 66 NRVTTISLAKSGLSGT----LSPEISSLTQLETLSFQMNNIAGAI----P-SLANATSLQDIYLDNNNFTSVPTGCFDGL 136 (782)
Q Consensus 66 ~~v~~L~l~~~~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~~----~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l 136 (782)
.++++|+|++|.+++. ++..+..+++|++|++++|.+++.. + .+.++++|++|+|++|.+.+++ ..+.++
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~-~~~~~~ 242 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELV-GFFKAA 242 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGH-HHHHHC
T ss_pred CCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHH-HHHhhh
Confidence 4688999999988765 4445677889999999999987432 2 3567889999999999888866 447777
Q ss_pred CCCCEEeccCCCCC-CCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCcc-ccc-cccc
Q 003982 137 TNLQVLSLSDNPNL-APWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPAS-FAK-SDIQ 213 (782)
Q Consensus 137 ~~L~~L~Ls~N~l~-~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~-~~l~ 213 (782)
++|++|+++.+... .....+..+..+++|+.|+++++. ...+|..+..+++|++|+|++|.+++..... +.. .+|+
T Consensus 243 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~ 321 (592)
T 3ogk_B 243 ANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLE 321 (592)
T ss_dssp TTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCC
T ss_pred hHHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCC
Confidence 88888888743222 112234455566666666666543 2334556666666666666666654322211 111 3455
Q ss_pred hhhcccccCCCccccccccCCCCCcEEEee-----------cccccCCC-CC-CCCCCCCCEEEcCCCcCccCcchhhcC
Q 003982 214 NLWMNDQQLGLSGTLDVLSGMTQLRQVWLH-----------KNQFTGPI-PD-LSKCESLFDLSLRDNQLTGVVPASVIS 280 (782)
Q Consensus 214 ~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~-----------~N~l~~~~-~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~ 280 (782)
.|++. +.+...+....+..+++|++|+++ .|.+++.. .. +..+++|++|+++.|++++..+..+..
T Consensus 322 ~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~ 400 (592)
T 3ogk_B 322 VLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGT 400 (592)
T ss_dssp EEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHH
T ss_pred EEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHh
Confidence 55555 222222222223445566666666 23444311 11 233556666666666665555555544
Q ss_pred -CCCCCEEEcc----CCcccCCCCC--------CCCCccEEEccCCc--CCCCCCCCCCCCChhhhhHHHhhcCCCCCcc
Q 003982 281 -LPALLNISLQ----NNKLQGPYPL--------FPSKVQKVSLDHNN--FCKNSSDAGKPCDPQVTTLLQIAGDMGYPAI 345 (782)
Q Consensus 281 -l~~L~~L~l~----~N~l~~~~~~--------~~~~l~~L~l~~N~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (782)
+++|+.|+++ .|.+++.+.. .+.+|+.|++++++ ++. ..+..+.........
T Consensus 401 ~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~-------------~~~~~~~~~~~~L~~ 467 (592)
T 3ogk_B 401 YLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTD-------------LGLSYIGQYSPNVRW 467 (592)
T ss_dssp HCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCH-------------HHHHHHHHSCTTCCE
T ss_pred hCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccH-------------HHHHHHHHhCccceE
Confidence 5566666664 4455542110 13455555554322 211 011111111111111
Q ss_pred cccCcCCCCCCC--CCCcccccCCceeEEEccCcccccc-cCccccccccCCeEecccccccccCCccC-CCCCCCCeEe
Q 003982 346 LSDSWEGNNACD--GWPFVTCSQGRIITINLANKLLAGN-ISPAYANLTSLKNLYLQQNNLTGPIPDGL-TKLASLQNLD 421 (782)
Q Consensus 346 ~~~~~~~~~~~~--~~p~~~~~~~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~ 421 (782)
+. . +++.+. .++..+..+++|+.|+|++|.+++. ++..+..+++|++|+|++|++++.-...+ ..++.|....
T Consensus 468 L~--L-~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~ 544 (592)
T 3ogk_B 468 ML--L-GYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIEL 544 (592)
T ss_dssp EE--E-CSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEE
T ss_pred ee--c-cCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEE
Confidence 11 1 111111 2233445668999999999999866 44455789999999999999987643333 3567777666
Q ss_pred cCCCc
Q 003982 422 VSNNN 426 (782)
Q Consensus 422 ls~N~ 426 (782)
+..++
T Consensus 545 ~~~~~ 549 (592)
T 3ogk_B 545 IPSRR 549 (592)
T ss_dssp ECCC-
T ss_pred ecCcc
Confidence 65543
No 356
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=1.4e-19 Score=181.00 Aligned_cols=152 Identities=20% Similarity=0.329 Sum_probs=132.2
Q ss_pred CCCCCCCccccceEeCCC----------CCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCC
Q 003982 48 STSSTGYCEWTGINCDNS----------NRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQ 116 (782)
Q Consensus 48 ~~~~~~~c~w~gv~c~~~----------~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~ 116 (782)
.++..+.|.|..|.|... ..++.|+|++|+|++..+..|..+++|++|+|++|+|++..| .|.++++|+
T Consensus 4 ~CP~~C~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~ 83 (220)
T 2v9t_B 4 HCPAACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLN 83 (220)
T ss_dssp CSCTTSEEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCC
T ss_pred CCCCCCEECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCC
Confidence 456667799999999752 368899999999987777788999999999999999998876 789999999
Q ss_pred EEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEccc
Q 003982 117 DIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSY 196 (782)
Q Consensus 117 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 196 (782)
+|+|++|+|+.+++..|.++++|++|+|++|++.. ..|..|..+++|++|+|++|+|+++.+..|..+++|++|+|++
T Consensus 84 ~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 161 (220)
T 2v9t_B 84 SLVLYGNKITELPKSLFEGLFSLQLLLLNANKINC--LRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQ 161 (220)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC--CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred EEECCCCcCCccCHhHccCCCCCCEEECCCCCCCE--eCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCC
Confidence 99999999999999889999999999999999888 5677888999999999999999998888899999999999999
Q ss_pred CcCCC
Q 003982 197 NNFTG 201 (782)
Q Consensus 197 N~l~~ 201 (782)
|.+..
T Consensus 162 N~~~c 166 (220)
T 2v9t_B 162 NPFIC 166 (220)
T ss_dssp SCEEC
T ss_pred CCcCC
Confidence 98874
No 357
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=1.9e-19 Score=179.93 Aligned_cols=152 Identities=22% Similarity=0.277 Sum_probs=130.1
Q ss_pred EEEeCCCCCCcccCccccCCccCceeecccCccCccCC--CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCC
Q 003982 70 TISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP--SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDN 147 (782)
Q Consensus 70 ~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~--~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 147 (782)
.+++++++++ .+|..+. ..+++|+|++|+|++.++ .|..+++|++|+|++|+|+.+++..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 4566667776 4676654 356899999999999865 4889999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccc
Q 003982 148 PNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGT 227 (782)
Q Consensus 148 ~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~ 227 (782)
++.. ..+..|..+++|++|+|++|+|+++.|..|..+++|++|+|++|+|++..|..|
T Consensus 92 ~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-------------------- 149 (220)
T 2v70_A 92 RLEN--VQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAF-------------------- 149 (220)
T ss_dssp CCCC--CCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTT--------------------
T ss_pred ccCc--cCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHh--------------------
Confidence 9988 456679999999999999999999999999999999999999999997667654
Q ss_pred cccccCCCCCcEEEeecccccCC
Q 003982 228 LDVLSGMTQLRQVWLHKNQFTGP 250 (782)
Q Consensus 228 ~~~~~~l~~L~~L~L~~N~l~~~ 250 (782)
..+++|+.|+|++|.+...
T Consensus 150 ----~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 150 ----DTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp ----TTCTTCCEEECCSCCEECS
T ss_pred ----cCCCCCCEEEecCcCCcCC
Confidence 3578888888888887753
No 358
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=2.3e-20 Score=195.18 Aligned_cols=168 Identities=25% Similarity=0.379 Sum_probs=97.2
Q ss_pred CccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCee
Q 003982 89 LTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTL 168 (782)
Q Consensus 89 l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L 168 (782)
+.++..+.+..+.+++.. .+..+++|++|++++|.++.++. +..+++|++|+|++|++.. ++. +..+++|++|
T Consensus 23 l~~~~~~~l~~~~~~~~~-~~~~l~~L~~L~l~~~~i~~~~~--~~~l~~L~~L~L~~n~l~~---~~~-l~~l~~L~~L 95 (291)
T 1h6t_A 23 FAETIKDNLKKKSVTDAV-TQNELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNGNKLTD---IKP-LANLKNLGWL 95 (291)
T ss_dssp HHHHHHHHTTCSCTTSEE-CHHHHHTCCEEECTTSCCCCCTT--GGGCTTCCEEECCSSCCCC---CGG-GTTCTTCCEE
T ss_pred HHHHHHHHhcCCCccccc-chhhcCcccEEEccCCCcccChh--HhcCCCCCEEEccCCccCC---Ccc-cccCCCCCEE
Confidence 344555667777766543 34567888888888888887753 6777788888888877776 333 6666666777
Q ss_pred eccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeeccccc
Q 003982 169 YMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFT 248 (782)
Q Consensus 169 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 248 (782)
+|++|++++. ..+..+++|++|+|++|++++ ++ . +..+++|++|++++|+++
T Consensus 96 ~l~~n~l~~~--~~l~~l~~L~~L~L~~n~i~~-~~-~------------------------l~~l~~L~~L~l~~n~l~ 147 (291)
T 1h6t_A 96 FLDENKVKDL--SSLKDLKKLKSLSLEHNGISD-IN-G------------------------LVHLPQLESLYLGNNKIT 147 (291)
T ss_dssp ECCSSCCCCG--GGGTTCTTCCEEECTTSCCCC-CG-G------------------------GGGCTTCCEEECCSSCCC
T ss_pred ECCCCcCCCC--hhhccCCCCCEEECCCCcCCC-Ch-h------------------------hcCCCCCCEEEccCCcCC
Confidence 7766666553 236666666666666666652 21 1 223455555555555555
Q ss_pred CCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcc
Q 003982 249 GPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKL 294 (782)
Q Consensus 249 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 294 (782)
+. +.+..+++|+.|+|++|+|++..| +..+++|+.|++++|++
T Consensus 148 ~~-~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 148 DI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp CC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred cc-hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcC
Confidence 43 334444444444444444443322 44444444444444443
No 359
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=4.2e-20 Score=211.65 Aligned_cols=194 Identities=23% Similarity=0.318 Sum_probs=159.3
Q ss_pred CCccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCe
Q 003982 88 SLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTT 167 (782)
Q Consensus 88 ~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~ 167 (782)
.+..+..+.++.+.+....+ +..+++|+.|+|++|.|+.++ .+..+++|+.|+|++|++.. ++. +..+++|+.
T Consensus 19 ~l~~l~~l~l~~~~i~~~~~-~~~L~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~Ls~N~l~~---~~~-l~~l~~L~~ 91 (605)
T 1m9s_A 19 AFAETIKDNLKKKSVTDAVT-QNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTD---IKP-LTNLKNLGW 91 (605)
T ss_dssp HHHHHHHHHTTCSCTTSEEC-HHHHTTCCCCBCTTCCCCCCT--TGGGCTTCCEEECTTSCCCC---CGG-GGGCTTCCE
T ss_pred HHHHHHHHhccCCCcccccc-hhcCCCCCEEECcCCCCCCCh--HHccCCCCCEEEeeCCCCCC---Chh-hccCCCCCE
Confidence 34556677888888886554 567899999999999999987 38899999999999999988 343 889999999
Q ss_pred eeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccc
Q 003982 168 LYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQF 247 (782)
Q Consensus 168 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l 247 (782)
|+|++|.|+++ ..+..+++|++|+|++|++++ ++ . +..+++|+.|+|++|++
T Consensus 92 L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~-l~-~------------------------l~~l~~L~~L~Ls~N~l 143 (605)
T 1m9s_A 92 LFLDENKIKDL--SSLKDLKKLKSLSLEHNGISD-IN-G------------------------LVHLPQLESLYLGNNKI 143 (605)
T ss_dssp EECCSSCCCCC--TTSTTCTTCCEEECTTSCCCC-CG-G------------------------GGGCTTCSEEECCSSCC
T ss_pred EECcCCCCCCC--hhhccCCCCCEEEecCCCCCC-Cc-c------------------------ccCCCccCEEECCCCcc
Confidence 99999999875 378899999999999999984 33 2 34589999999999999
Q ss_pred cCCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCC-CCCCCccEEEccCCcCCCCC
Q 003982 248 TGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYP-LFPSKVQKVSLDHNNFCKNS 319 (782)
Q Consensus 248 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~l~~N~~~~~~ 319 (782)
++. +.+..+++|+.|+|++|+|++..| +..+++|+.|+|++|+|++..+ ..+.+|+.|+|++|.+.+.+
T Consensus 144 ~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l~~l~~l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 144 TDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNKP 213 (605)
T ss_dssp CCC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBCGGGTTCTTCSEEECCSEEEECCC
T ss_pred CCc-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCChHHccCCCCCEEEccCCcCcCCc
Confidence 986 678899999999999999997766 8999999999999999987422 12456777777777765543
No 360
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=1.6e-19 Score=195.13 Aligned_cols=177 Identities=25% Similarity=0.317 Sum_probs=126.0
Q ss_pred EEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCC-CCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCC
Q 003982 70 TISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLA-NATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDN 147 (782)
Q Consensus 70 ~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~-~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 147 (782)
.+++++++|+ .+|..+. ..++.|+|++|+|++.++ .|. ++++|++|+|++|+|+.+++..|.++++|++|+|++|
T Consensus 22 ~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 4566666777 4676554 358889999999988877 466 8888999999999998888888888888888888888
Q ss_pred CCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccc
Q 003982 148 PNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGT 227 (782)
Q Consensus 148 ~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~ 227 (782)
++.. ..+..|.++++|+.|+|++|+|+++.+..|..+++|++|+|++|+|+ .+|..+..
T Consensus 99 ~l~~--~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~------------------ 157 (361)
T 2xot_A 99 HLHT--LDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIK------------------ 157 (361)
T ss_dssp CCCE--ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGGGTC------------------
T ss_pred cCCc--CCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHHHhc------------------
Confidence 8776 33445667777777777777777666666666777777777777666 34433210
Q ss_pred cccccCCCCCcEEEeecccccCCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCC--CCEEEccCCccc
Q 003982 228 LDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPA--LLNISLQNNKLQ 295 (782)
Q Consensus 228 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~l~~N~l~ 295 (782)
.+..+++|+.|+|++|+|++..+..+..++. |+.|+|++|++.
T Consensus 158 -------------------------~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 158 -------------------------DGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp -----------------------------CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred -------------------------CcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 0145677777777788877666677777776 377888888876
No 361
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=4.1e-19 Score=177.50 Aligned_cols=155 Identities=18% Similarity=0.243 Sum_probs=131.8
Q ss_pred cEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccccCCCCC--CCCCCCCCEEEcCC
Q 003982 190 QNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPD--LSKCESLFDLSLRD 267 (782)
Q Consensus 190 ~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--~~~l~~L~~L~L~~ 267 (782)
+.+++++|.++ .+|..+. +.+++|+|++|+|++.++. |..+++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--------------------------~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~ 66 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--------------------------QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSN 66 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--------------------------TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--------------------------CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCC
Confidence 58889999988 6776542 4568899999999987553 78899999999999
Q ss_pred CcCccCcchhhcCCCCCCEEEccCCcccCCCCCCCCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccc
Q 003982 268 NQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILS 347 (782)
Q Consensus 268 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (782)
|+|++..+..|.++++|++|+|++|++++..+
T Consensus 67 N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~------------------------------------------------ 98 (220)
T 2v70_A 67 NKITDIEEGAFEGASGVNEILLTSNRLENVQH------------------------------------------------ 98 (220)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCCCCG------------------------------------------------
T ss_pred CcCCEECHHHhCCCCCCCEEECCCCccCccCH------------------------------------------------
Confidence 99998888889999999999999888875433
Q ss_pred cCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcC
Q 003982 348 DSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNL 427 (782)
Q Consensus 348 ~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l 427 (782)
..+..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|++
T Consensus 99 -------------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 165 (220)
T 2v70_A 99 -------------KMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPF 165 (220)
T ss_dssp -------------GGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCE
T ss_pred -------------hHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCC
Confidence 2345567899999999999998899999999999999999999998899999999999999999999
Q ss_pred CCCCC
Q 003982 428 SGKVP 432 (782)
Q Consensus 428 ~g~~p 432 (782)
++..+
T Consensus 166 ~c~c~ 170 (220)
T 2v70_A 166 NCNCY 170 (220)
T ss_dssp ECSGG
T ss_pred cCCCc
Confidence 98766
No 362
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.79 E-value=3.2e-22 Score=231.77 Aligned_cols=326 Identities=15% Similarity=0.183 Sum_probs=193.4
Q ss_pred CCEEEEEeCCCCCCcccCcccc-CCccCceeecccC-ccCcc-CC-CCCCCCCCCEEeCCCCcccCCCCCCC----CCCC
Q 003982 66 NRVTTISLAKSGLSGTLSPEIS-SLTQLETLSFQMN-NIAGA-IP-SLANATSLQDIYLDNNNFTSVPTGCF----DGLT 137 (782)
Q Consensus 66 ~~v~~L~l~~~~l~~~~~~~l~-~l~~L~~L~L~~N-~l~~~-~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~----~~l~ 137 (782)
.++++|+|+++.+++..+..+. .+++|++|+|++| .++.. .+ .+.++++|++|+|++|.++......+ ..++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4688999999988877766665 6889999999988 55542 23 34478999999999999876554333 3677
Q ss_pred CCCEEeccCCC--CCCCCCCCcccCCCcccCeeecccc-ccCCCCcccccCCCCCcEEEcccCcC---------------
Q 003982 138 NLQVLSLSDNP--NLAPWPFPNELTKSTSLTTLYMDNA-NIFGLIPDFFDSFSNLQNLRLSYNNF--------------- 199 (782)
Q Consensus 138 ~L~~L~Ls~N~--l~~~~~~p~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~Ls~N~l--------------- 199 (782)
+|++|+|++|. +.. ..++..+.++++|++|+|++| .+.+ ++..+..+++|++|+++.+..
T Consensus 185 ~L~~L~l~~~~~~~~~-~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~ 262 (594)
T 2p1m_B 185 SLVSLNISCLASEVSF-SALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALS 262 (594)
T ss_dssp CCCEEECTTCCSCCCH-HHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHH
T ss_pred cCcEEEecccCCcCCH-HHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHh
Confidence 99999999886 111 001122345689999999988 4444 677778888888888665521
Q ss_pred -----------CCCCCcccc-----ccccchhhcccccCCCccccccccCCCCCcEEEeecccccC-CCCC-CCCCCCCC
Q 003982 200 -----------TGSLPASFA-----KSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTG-PIPD-LSKCESLF 261 (782)
Q Consensus 200 -----------~~~~p~~~~-----~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~-~~~l~~L~ 261 (782)
....+..+. ..+|+.|+++.|.+...+....+..+++|++|++++| ++. ..+. ...+++|+
T Consensus 263 ~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~ 341 (594)
T 2p1m_B 263 GCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLR 341 (594)
T ss_dssp TCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCC
T ss_pred cCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCC
Confidence 111111111 1455666666665433222233445666666666666 332 1111 12356666
Q ss_pred EEEc---------CCCcCccCcchhhc-CCCCCCEEEccCCcccCCCCC----CCCCccEEEccC------CcCCCCCCC
Q 003982 262 DLSL---------RDNQLTGVVPASVI-SLPALLNISLQNNKLQGPYPL----FPSKVQKVSLDH------NNFCKNSSD 321 (782)
Q Consensus 262 ~L~L---------~~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~~~----~~~~l~~L~l~~------N~~~~~~~~ 321 (782)
.|++ ..|.+++.....+. .+++|+.|+++.|.+++..+. .+++|+.|+++. |+++..+
T Consensus 342 ~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~-- 419 (594)
T 2p1m_B 342 ELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEP-- 419 (594)
T ss_dssp EEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCC--
T ss_pred EEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCc--
Confidence 6666 23445443333333 356666666666666543221 134566666662 2222111
Q ss_pred CCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccc-cccCCeEeccc
Q 003982 322 AGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYAN-LTSLKNLYLQQ 400 (782)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~ 400 (782)
.+. .++..+..+++|+.|+|++ .+++..+..+.. +++|++|+|++
T Consensus 420 ----~~~-----------------------------~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~ 465 (594)
T 2p1m_B 420 ----LDI-----------------------------GFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAF 465 (594)
T ss_dssp ----THH-----------------------------HHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEES
T ss_pred ----hhh-----------------------------HHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccC
Confidence 000 0111133456778888866 666655555554 77788888888
Q ss_pred ccccccCCccC-CCCCCCCeEecCCCcCCCC
Q 003982 401 NNLTGPIPDGL-TKLASLQNLDVSNNNLSGK 430 (782)
Q Consensus 401 N~l~g~~p~~~-~~l~~L~~L~ls~N~l~g~ 430 (782)
|++++..+..+ ..+++|+.|+|++|++++.
T Consensus 466 ~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~ 496 (594)
T 2p1m_B 466 AGDSDLGMHHVLSGCDSLRKLEIRDCPFGDK 496 (594)
T ss_dssp CCSSHHHHHHHHHHCTTCCEEEEESCSCCHH
T ss_pred CCCcHHHHHHHHhcCCCcCEEECcCCCCcHH
Confidence 88766554444 5577788888888877543
No 363
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78 E-value=1.7e-19 Score=184.87 Aligned_cols=139 Identities=22% Similarity=0.215 Sum_probs=108.0
Q ss_pred CCccceeecccceEEEEEEe-CCCcE--EEEEEeccccCCh----------------------hhHHHHHHHHHHHHhcC
Q 003982 583 FSEANILGRGGFGVVYGGEL-PDGTK--IAVKRMESNTMGN----------------------KGLSEFQAEIAVLTKVR 637 (782)
Q Consensus 583 y~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~----------------------~~~~~~~~E~~~l~~l~ 637 (782)
|.+.+.||+|+||.||+|.. .+|+. ||||+++...... .....+.+|++++++++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999999976 68888 9999976532110 11246889999999998
Q ss_pred CCCc--ceEEeEEEeCCeEEEEEEccCC-C----CHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHh-hcCCCCeE
Q 003982 638 HRHL--VALLGYCINGSERLLVYEYMPR-G----TLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLH-SLAQQSFI 709 (782)
Q Consensus 638 h~nI--~~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~~~~iv 709 (782)
|++| +.++++ ...++||||+.+ | +|.+.... .++.++..++.|++.|+.||| + .||+
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~---~giv 193 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQE---AELV 193 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHT---SCEE
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHH---CCEE
Confidence 8764 444443 356899999942 4 56555422 234567889999999999999 7 8999
Q ss_pred EcCCCCCCEEECCCCcEEEEeeccceecC
Q 003982 710 HRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (782)
Q Consensus 710 HrDikp~NIll~~~~~~kL~DfG~a~~~~ 738 (782)
||||||+|||+++ .++|+|||+|....
T Consensus 194 HrDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 194 HADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp CSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred eCCCCHHHEEEcC--cEEEEECcccccCC
Confidence 9999999999998 99999999997654
No 364
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=1.5e-18 Score=173.41 Aligned_cols=79 Identities=22% Similarity=0.377 Sum_probs=41.7
Q ss_pred EEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCC
Q 003982 70 TISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNP 148 (782)
Q Consensus 70 ~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 148 (782)
.+++++++++ .+|..+. ++|+.|+|++|+|+++++ .|..+++|++|+|++|+|+.+++..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 4666666665 4444433 455555555555555544 45555555555555555555544445555555555544444
Q ss_pred CCC
Q 003982 149 NLA 151 (782)
Q Consensus 149 l~~ 151 (782)
+..
T Consensus 92 l~~ 94 (220)
T 2v9t_B 92 ITE 94 (220)
T ss_dssp CCC
T ss_pred CCc
Confidence 443
No 365
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.78 E-value=1.8e-19 Score=185.30 Aligned_cols=177 Identities=21% Similarity=0.220 Sum_probs=139.1
Q ss_pred CCccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCe
Q 003982 88 SLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTT 167 (782)
Q Consensus 88 ~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~ 167 (782)
.+.+++.+++++|.+++.+ .+..+++|++|++++|+++.++ .+..+++|++|+|++|++.. ++. +..+++|++
T Consensus 17 ~l~~l~~l~l~~~~i~~~~-~~~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~L~~N~i~~---~~~-l~~l~~L~~ 89 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV-SQKELSGVQNFNGDNSNIQSLA--GMQFFTNLKELHLSHNQISD---LSP-LKDLTKLEE 89 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE-CHHHHTTCSEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCC---CGG-GTTCSSCCE
T ss_pred HHHHHHHHHhcCCCccccc-chhhcCcCcEEECcCCCcccch--HHhhCCCCCEEECCCCccCC---Chh-hccCCCCCE
Confidence 5667778888888888665 5777888888888888888877 47788888888888888887 444 888888888
Q ss_pred eeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccc
Q 003982 168 LYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQF 247 (782)
Q Consensus 168 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l 247 (782)
|+|++|++++..+ . .. ++|++|+|++|++++ ++ . +.++++|++|+|++|++
T Consensus 90 L~L~~N~l~~l~~-~-~~-~~L~~L~L~~N~l~~-~~-~------------------------l~~l~~L~~L~Ls~N~i 140 (263)
T 1xeu_A 90 LSVNRNRLKNLNG-I-PS-ACLSRLFLDNNELRD-TD-S------------------------LIHLKNLEILSIRNNKL 140 (263)
T ss_dssp EECCSSCCSCCTT-C-CC-SSCCEEECCSSCCSB-SG-G------------------------GTTCTTCCEEECTTSCC
T ss_pred EECCCCccCCcCc-c-cc-CcccEEEccCCccCC-Ch-h------------------------hcCcccccEEECCCCcC
Confidence 8888888887532 2 22 888889999888873 32 1 44688899999999998
Q ss_pred cCCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCCCCC
Q 003982 248 TGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPS 303 (782)
Q Consensus 248 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 303 (782)
++. +.+..+++|+.|+|++|+|++. ..+..+++|+.|++++|++++.......
T Consensus 141 ~~~-~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~~~~~~~ 193 (263)
T 1xeu_A 141 KSI-VMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNEPVKYQP 193 (263)
T ss_dssp CBC-GGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECCCEECCS
T ss_pred CCC-hHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCCcccccc
Confidence 876 4678889999999999999866 6788899999999999999876444433
No 366
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=6.3e-19 Score=190.38 Aligned_cols=156 Identities=21% Similarity=0.299 Sum_probs=138.7
Q ss_pred CCCCCCCCccccceEeCCC----------CCEEEEEeCCCCCCcccCcccc-CCccCceeecccCccCccCC-CCCCCCC
Q 003982 47 SSTSSTGYCEWTGINCDNS----------NRVTTISLAKSGLSGTLSPEIS-SLTQLETLSFQMNNIAGAIP-SLANATS 114 (782)
Q Consensus 47 ~~~~~~~~c~w~gv~c~~~----------~~v~~L~l~~~~l~~~~~~~l~-~l~~L~~L~L~~N~l~~~~~-~l~~l~~ 114 (782)
..++..|.|.|..|.|.+. ..++.|+|++|+|++..+..+. .+++|++|+|++|+|+++++ .|.++++
T Consensus 10 ~~Cp~~C~C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~ 89 (361)
T 2xot_A 10 VSCPANCLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPN 89 (361)
T ss_dssp TTCCTTCEEETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTT
T ss_pred CCCCCCCEECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCC
Confidence 3466677799999999752 3588999999999987777787 99999999999999999887 7999999
Q ss_pred CCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccc---cCCCCCcE
Q 003982 115 LQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFF---DSFSNLQN 191 (782)
Q Consensus 115 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~ 191 (782)
|++|+|++|+|+.+++..|.++++|++|+|++|++.. ..|..|..+++|+.|+|++|+|+++.+..| ..+++|++
T Consensus 90 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~--~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~ 167 (361)
T 2xot_A 90 LRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVV--VDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLML 167 (361)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE--ECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCE
T ss_pred CCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccE--ECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCE
Confidence 9999999999999999999999999999999999998 567889999999999999999999877777 67999999
Q ss_pred EEcccCcCCCCCCc
Q 003982 192 LRLSYNNFTGSLPA 205 (782)
Q Consensus 192 L~Ls~N~l~~~~p~ 205 (782)
|+|++|+|+ .+|.
T Consensus 168 L~L~~N~l~-~l~~ 180 (361)
T 2xot_A 168 LDLSSNKLK-KLPL 180 (361)
T ss_dssp EECCSSCCC-CCCH
T ss_pred EECCCCCCC-ccCH
Confidence 999999999 5553
No 367
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=3.4e-18 Score=172.00 Aligned_cols=151 Identities=26% Similarity=0.312 Sum_probs=85.3
Q ss_pred CceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeecc
Q 003982 92 LETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMD 171 (782)
Q Consensus 92 L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~ 171 (782)
.+.++++++.++.++..+. ++|++|+|++|+|+++++..|.++++|++|+|++|++.. ..+..|..+++|++|+|+
T Consensus 21 ~~~v~c~~~~l~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~--i~~~~~~~l~~L~~L~Ls 96 (229)
T 3e6j_A 21 GTTVDCRSKRHASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGA--LPVGVFDSLTQLTVLDLG 96 (229)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC--CCTTTTTTCTTCCEEECC
T ss_pred CCEeEccCCCcCccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCC--cChhhcccCCCcCEEECC
Confidence 4556677777665554443 667777777777777666666666666666666666655 223345556666666666
Q ss_pred ccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccccCCC
Q 003982 172 NANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPI 251 (782)
Q Consensus 172 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 251 (782)
+|+|+++.+..|..+++|++|+|++|+|+ .+|..+. ++++|++|+|++|+|++.+
T Consensus 97 ~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~------------------------~l~~L~~L~L~~N~l~~~~ 151 (229)
T 3e6j_A 97 TNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIE------------------------RLTHLTHLALDQNQLKSIP 151 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGG------------------------GCTTCSEEECCSSCCCCCC
T ss_pred CCcCCccChhHhCcchhhCeEeccCCccc-ccCcccc------------------------cCCCCCEEECCCCcCCccC
Confidence 66666555555555566666666666555 4444332 2455555555555555443
Q ss_pred CC-CCCCCCCCEEEcCCCcCc
Q 003982 252 PD-LSKCESLFDLSLRDNQLT 271 (782)
Q Consensus 252 ~~-~~~l~~L~~L~L~~N~l~ 271 (782)
+. |..+++|+.|+|++|.+.
T Consensus 152 ~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 152 HGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp TTTTTTCTTCCEEECTTSCBC
T ss_pred HHHHhCCCCCCEEEeeCCCcc
Confidence 32 444444444444444444
No 368
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.76 E-value=2.3e-21 Score=224.62 Aligned_cols=318 Identities=16% Similarity=0.174 Sum_probs=219.4
Q ss_pred CCEEEEEeCCC-CCCcc-cCccccCCccCceeecccCccCccCC-C----CCCCCCCCEEeCCCCcccCCCCCCC----C
Q 003982 66 NRVTTISLAKS-GLSGT-LSPEISSLTQLETLSFQMNNIAGAIP-S----LANATSLQDIYLDNNNFTSVPTGCF----D 134 (782)
Q Consensus 66 ~~v~~L~l~~~-~l~~~-~~~~l~~l~~L~~L~L~~N~l~~~~~-~----l~~l~~L~~L~Ls~n~l~~~~~~~~----~ 134 (782)
.++++|+|++| .++.. ++..+..+++|++|+|++|.+++..+ . ...+++|++|+|++|. ..+....+ .
T Consensus 130 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~~~~~~~l~~l~~ 208 (594)
T 2p1m_B 130 KNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-SEVSFSALERLVT 208 (594)
T ss_dssp TTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-SCCCHHHHHHHHH
T ss_pred CCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-CcCCHHHHHHHHH
Confidence 47899999998 55533 44445689999999999999876443 2 3467899999999997 33332222 3
Q ss_pred CCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccc--------------------------cCCC----Cccccc
Q 003982 135 GLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNAN--------------------------IFGL----IPDFFD 184 (782)
Q Consensus 135 ~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~--------------------------l~~~----~~~~~~ 184 (782)
++++|++|+|++|.... .++..+..+++|+.|+++.+. +... ++..+.
T Consensus 209 ~~~~L~~L~L~~~~~~~--~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~ 286 (594)
T 2p1m_B 209 RCPNLKSLKLNRAVPLE--KLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYS 286 (594)
T ss_dssp HCTTCCEEECCTTSCHH--HHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHH
T ss_pred hCCCCcEEecCCCCcHH--HHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHH
Confidence 46999999999983222 145566667777777755441 1111 233344
Q ss_pred CCCCCcEEEcccCcCCCCCCccc--cccccchhhcccccCCCccccccccCCCCCcEEEeec---------ccccCCCC-
Q 003982 185 SFSNLQNLRLSYNNFTGSLPASF--AKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHK---------NQFTGPIP- 252 (782)
Q Consensus 185 ~l~~L~~L~Ls~N~l~~~~p~~~--~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~---------N~l~~~~~- 252 (782)
.+++|++|+|++|.+++.....+ ...+|+.|++.++ +...+.......+++|++|++++ |.+++...
T Consensus 287 ~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~ 365 (594)
T 2p1m_B 287 VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLV 365 (594)
T ss_dssp HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHH
T ss_pred hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHH
Confidence 67899999999999764322221 1157888888877 33222222334589999999954 44443211
Q ss_pred CC-CCCCCCCEEEcCCCcCccCcchhhc-CCCCCCEEEcc--C----CcccCCCC--------CCCCCccEEEccCCcCC
Q 003982 253 DL-SKCESLFDLSLRDNQLTGVVPASVI-SLPALLNISLQ--N----NKLQGPYP--------LFPSKVQKVSLDHNNFC 316 (782)
Q Consensus 253 ~~-~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~l~--~----N~l~~~~~--------~~~~~l~~L~l~~N~~~ 316 (782)
.+ ..+++|+.|++..|++++..+..+. .+++|+.|+++ + |.+++... ..+.+|+.|++++ .++
T Consensus 366 ~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~ 444 (594)
T 2p1m_B 366 SVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLT 444 (594)
T ss_dssp HHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCC
T ss_pred HHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-ccc
Confidence 12 3479999999999999987777776 58999999999 4 66663221 1246899999976 442
Q ss_pred CCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCccccc-CCceeEEEccCcccccccCccc-cccccCC
Q 003982 317 KNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCS-QGRIITINLANKLLAGNISPAY-ANLTSLK 394 (782)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~ 394 (782)
... +..++. .++|+.|+|++|.+++..+..+ .++++|+
T Consensus 445 ~~~----------------------------------------~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~ 484 (594)
T 2p1m_B 445 DKV----------------------------------------FEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLR 484 (594)
T ss_dssp HHH----------------------------------------HHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCC
T ss_pred HHH----------------------------------------HHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcC
Confidence 211 111222 5689999999999987766665 6789999
Q ss_pred eEecccccccccCCc-cCCCCCCCCeEecCCCcCC
Q 003982 395 NLYLQQNNLTGPIPD-GLTKLASLQNLDVSNNNLS 428 (782)
Q Consensus 395 ~L~Ls~N~l~g~~p~-~~~~l~~L~~L~ls~N~l~ 428 (782)
+|+|++|++++..+. .+..+++|+.|++++|+++
T Consensus 485 ~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 485 KLEIRDCPFGDKALLANASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp EEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCB
T ss_pred EEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCC
Confidence 999999999765544 3455899999999999984
No 369
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.75 E-value=8.4e-21 Score=216.18 Aligned_cols=140 Identities=18% Similarity=0.211 Sum_probs=80.7
Q ss_pred CCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccc-------------cCCCCcccccCCCCCcEEE-cccCcC
Q 003982 134 DGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNAN-------------IFGLIPDFFDSFSNLQNLR-LSYNNF 199 (782)
Q Consensus 134 ~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~~~~~~~l~~L~~L~-Ls~N~l 199 (782)
..+++|+.|+|++|++.. +|..++++++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~~---Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~ 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKSTV---LQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL 422 (567)
T ss_dssp STTTTSSSCCCCHHHHHH---HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH
T ss_pred ccCccceeccCChhhHHh---hHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc
Confidence 345566666666666654 56666666667776665554 4455566666677777776 555544
Q ss_pred CCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccccCCCCCCCCCCCCCEEEcCCCcCccCcchhhc
Q 003982 200 TGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVI 279 (782)
Q Consensus 200 ~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 279 (782)
. .+..+.+..|.+.... ...|+.|+|++|+|++.+ .+..+++|+.|+|++|+|+ .+|..|+
T Consensus 423 ~----------~L~~l~l~~n~i~~l~-------~~~L~~L~Ls~n~l~~lp-~~~~l~~L~~L~Ls~N~l~-~lp~~~~ 483 (567)
T 1dce_A 423 D----------DLRSKFLLENSVLKME-------YADVRVLHLAHKDLTVLC-HLEQLLLVTHLDLSHNRLR-ALPPALA 483 (567)
T ss_dssp H----------HHHHHHHHHHHHHHHH-------HTTCSEEECTTSCCSSCC-CGGGGTTCCEEECCSSCCC-CCCGGGG
T ss_pred c----------hhhhhhhhcccccccC-------ccCceEEEecCCCCCCCc-CccccccCcEeecCccccc-ccchhhh
Confidence 2 2333333333322100 123666666666666543 3666666666666666666 5566666
Q ss_pred CCCCCCEEEccCCccc
Q 003982 280 SLPALLNISLQNNKLQ 295 (782)
Q Consensus 280 ~l~~L~~L~l~~N~l~ 295 (782)
++++|+.|+|++|+|+
T Consensus 484 ~l~~L~~L~Ls~N~l~ 499 (567)
T 1dce_A 484 ALRCLEVLQASDNALE 499 (567)
T ss_dssp GCTTCCEEECCSSCCC
T ss_pred cCCCCCEEECCCCCCC
Confidence 6666666666666655
No 370
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=1.8e-18 Score=169.67 Aligned_cols=153 Identities=17% Similarity=0.185 Sum_probs=91.7
Q ss_pred CCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCC
Q 003982 110 ANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNL 189 (782)
Q Consensus 110 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 189 (782)
..+++|++|++++|+++.++ .+..+++|++|++++|.+.. +..+..+++|++|++++|++++..+..+..+++|
T Consensus 41 ~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~l~~n~~~~----~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTDLT--GIEYAHNIKDLTINNIHATN----YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp HHHHTCCEEEEESSCCSCCT--TGGGCTTCSEEEEESCCCSC----CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred hhcCCccEEeccCCCccChH--HHhcCCCCCEEEccCCCCCc----chhhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 34455556666666655555 25555666666666664433 2355566666666666666666556666666667
Q ss_pred cEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeeccc-ccCCCCCCCCCCCCCEEEcCCC
Q 003982 190 QNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQ-FTGPIPDLSKCESLFDLSLRDN 268 (782)
Q Consensus 190 ~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~l~~L~~L~L~~N 268 (782)
++|++++|++++..|..+ ..+++|++|++++|+ ++. .+.+..+++|+.|++++|
T Consensus 115 ~~L~Ls~n~i~~~~~~~l------------------------~~l~~L~~L~L~~n~~i~~-~~~l~~l~~L~~L~l~~n 169 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKI------------------------NTLPKVNSIDLSYNGAITD-IMPLKTLPELKSLNIQFD 169 (197)
T ss_dssp CEEECCSSBCBGGGHHHH------------------------TTCSSCCEEECCSCTBCCC-CGGGGGCSSCCEEECTTB
T ss_pred CEEEecCCccCcHhHHHH------------------------hhCCCCCEEEccCCCCccc-cHhhcCCCCCCEEECCCC
Confidence 777777666664444332 346666666666666 443 335666777777777777
Q ss_pred cCccCcchhhcCCCCCCEEEccCCccc
Q 003982 269 QLTGVVPASVISLPALLNISLQNNKLQ 295 (782)
Q Consensus 269 ~l~~~~p~~~~~l~~L~~L~l~~N~l~ 295 (782)
++++ ++ .+..+++|++|++++|++.
T Consensus 170 ~i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 170 GVHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCCC-CT-TGGGCSSCCEEEECBC---
T ss_pred CCcC-hH-HhccCCCCCEEEeeCcccC
Confidence 7764 33 6667777777777777765
No 371
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=2.4e-18 Score=168.85 Aligned_cols=154 Identities=18% Similarity=0.249 Sum_probs=113.1
Q ss_pred cCCccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccC
Q 003982 87 SSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLT 166 (782)
Q Consensus 87 ~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~ 166 (782)
..+++|++|++++|.|+..+ .+..+++|++|++++|.++.++ .+..+++|++|++++|++.. ..+..+..+++|+
T Consensus 41 ~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~l~~n~l~~--~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTDLT-GIEYAHNIKDLTINNIHATNYN--PISGLSNLERLRIMGKDVTS--DKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHTCCEEEEESSCCSCCT-TGGGCTTCSEEEEESCCCSCCG--GGTTCTTCCEEEEECTTCBG--GGSCCCTTCTTCC
T ss_pred hhcCCccEEeccCCCccChH-HHhcCCCCCEEEccCCCCCcch--hhhcCCCCCEEEeECCccCc--ccChhhcCCCCCC
Confidence 55677777777777777444 6777777888888877776654 46777888888888887765 3466777888888
Q ss_pred eeeccccccCCCCcccccCCCCCcEEEcccCc-CCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecc
Q 003982 167 TLYMDNANIFGLIPDFFDSFSNLQNLRLSYNN-FTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKN 245 (782)
Q Consensus 167 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N 245 (782)
+|+|++|++++..+..+..+++|++|++++|+ ++ .+| . +..+++|++|++++|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~------------------------l~~l~~L~~L~l~~n 169 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-P------------------------LKTLPELKSLNIQFD 169 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-G------------------------GGGCSSCCEEECTTB
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-h------------------------hcCCCCCCEEECCCC
Confidence 88888888887777888888888888888887 54 444 2 335788888888888
Q ss_pred cccCCCCCCCCCCCCCEEEcCCCcCcc
Q 003982 246 QFTGPIPDLSKCESLFDLSLRDNQLTG 272 (782)
Q Consensus 246 ~l~~~~~~~~~l~~L~~L~L~~N~l~~ 272 (782)
++++.. .+..+++|++|++++|+|.+
T Consensus 170 ~i~~~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 170 GVHDYR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCCCCT-TGGGCSSCCEEEECBC----
T ss_pred CCcChH-HhccCCCCCEEEeeCcccCC
Confidence 888644 67778888888888888763
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=3e-18 Score=176.14 Aligned_cols=167 Identities=19% Similarity=0.273 Sum_probs=139.5
Q ss_pred EEEEEeCCCCCCcccCccccCCccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCC
Q 003982 68 VTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDN 147 (782)
Q Consensus 68 v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 147 (782)
++.+++.++.+++. + .+..+++|++|++++|.|+..+ .+..+++|++|+|++|+|+++++ +.++++|++|+|++|
T Consensus 21 l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N 95 (263)
T 1xeu_A 21 AVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQSLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRN 95 (263)
T ss_dssp HHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSS
T ss_pred HHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCcccch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCC
Confidence 44566777777743 3 5788999999999999998654 78889999999999999999887 889999999999999
Q ss_pred CCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccc
Q 003982 148 PNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGT 227 (782)
Q Consensus 148 ~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~ 227 (782)
++.. +|... . ++|+.|+|++|++++. ..+..+++|++|+|++|++++ ++ .
T Consensus 96 ~l~~---l~~~~-~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~-~~-~--------------------- 145 (263)
T 1xeu_A 96 RLKN---LNGIP-S-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKS-IV-M--------------------- 145 (263)
T ss_dssp CCSC---CTTCC-C-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCB-CG-G---------------------
T ss_pred ccCC---cCccc-c-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCC-Ch-H---------------------
Confidence 9988 33322 2 8999999999999886 358899999999999999983 43 2
Q ss_pred cccccCCCCCcEEEeecccccCCCCCCCCCCCCCEEEcCCCcCccC
Q 003982 228 LDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGV 273 (782)
Q Consensus 228 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~ 273 (782)
+..+++|++|+|++|++++. +.+..+++|+.|++++|++++.
T Consensus 146 ---l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 146 ---LGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp ---GGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEECC
T ss_pred ---HccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccCC
Confidence 34589999999999999987 7788999999999999999855
No 373
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.74 E-value=8.8e-21 Score=216.00 Aligned_cols=193 Identities=17% Similarity=0.180 Sum_probs=154.4
Q ss_pred cCCccCceeecccCccCccCCCCCCCCCCCEEeCCCCc-------------ccCCCCCCCCCCCCCCEEe-ccCCCCCCC
Q 003982 87 SSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNN-------------FTSVPTGCFDGLTNLQVLS-LSDNPNLAP 152 (782)
Q Consensus 87 ~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~-------------l~~~~~~~~~~l~~L~~L~-Ls~N~l~~~ 152 (782)
...++|+.|+|++|+++.+++.++++++|+.|++++|. +.+.++..+.++++|+.|+ ++.|.+..
T Consensus 346 ~~~~~L~~L~Ls~n~L~~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~- 424 (567)
T 1dce_A 346 ATDEQLFRCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDD- 424 (567)
T ss_dssp STTTTSSSCCCCHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHH-
T ss_pred ccCccceeccCChhhHHhhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccch-
Confidence 57889999999999998776689999999999998775 4555666677888888888 56554322
Q ss_pred CCCCc------ccCC--CcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCC
Q 003982 153 WPFPN------ELTK--STSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGL 224 (782)
Q Consensus 153 ~~~p~------~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~ 224 (782)
++. .+.. ...|+.|+|++|+|+++ |. |..+++|++|+|++|+|+ .+|..+.
T Consensus 425 --L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~l-p~-~~~l~~L~~L~Ls~N~l~-~lp~~~~---------------- 483 (567)
T 1dce_A 425 --LRSKFLLENSVLKMEYADVRVLHLAHKDLTVL-CH-LEQLLLVTHLDLSHNRLR-ALPPALA---------------- 483 (567)
T ss_dssp --HHHHHHHHHHHHHHHHTTCSEEECTTSCCSSC-CC-GGGGTTCCEEECCSSCCC-CCCGGGG----------------
T ss_pred --hhhhhhhcccccccCccCceEEEecCCCCCCC-cC-ccccccCcEeecCccccc-ccchhhh----------------
Confidence 110 1111 12588899999999885 55 888999999999999998 7887654
Q ss_pred ccccccccCCCCCcEEEeecccccCCCCCCCCCCCCCEEEcCCCcCccCc-chhhcCCCCCCEEEccCCcccCCCCCC--
Q 003982 225 SGTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVV-PASVISLPALLNISLQNNKLQGPYPLF-- 301 (782)
Q Consensus 225 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~~~~-- 301 (782)
++++|+.|+|++|+|++.+ .+..+++|+.|+|++|+|++.. |..|+.+++|+.|+|++|+|++.+|..
T Consensus 484 --------~l~~L~~L~Ls~N~l~~lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 554 (567)
T 1dce_A 484 --------ALRCLEVLQASDNALENVD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQER 554 (567)
T ss_dssp --------GCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTH
T ss_pred --------cCCCCCEEECCCCCCCCCc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHH
Confidence 5899999999999999854 8999999999999999999887 999999999999999999999887753
Q ss_pred ----CCCccEEEc
Q 003982 302 ----PSKVQKVSL 310 (782)
Q Consensus 302 ----~~~l~~L~l 310 (782)
+++|+.|++
T Consensus 555 l~~~lp~L~~L~l 567 (567)
T 1dce_A 555 LAEMLPSVSSILT 567 (567)
T ss_dssp HHHHCTTCSEEEC
T ss_pred HHHHCcccCccCC
Confidence 457777753
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=6.5e-18 Score=164.93 Aligned_cols=141 Identities=21% Similarity=0.307 Sum_probs=122.9
Q ss_pred CCCCCCccccceEeCCCCCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCCC--CCCCCCCCEEeCCCCccc
Q 003982 49 TSSTGYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPS--LANATSLQDIYLDNNNFT 126 (782)
Q Consensus 49 ~~~~~~c~w~gv~c~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~--l~~l~~L~~L~Ls~n~l~ 126 (782)
++..+.|.|+. +++++++++ .+|..+.. +|++|+|++|+|++.++. |..+++|++|+|++|+|+
T Consensus 2 CP~~C~C~~~~-----------l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~ 67 (192)
T 1w8a_A 2 CPAMCHCEGTT-----------VDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT 67 (192)
T ss_dssp CCTTSEEETTE-----------EECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCC
T ss_pred cCCCCEECCCE-----------EEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCC
Confidence 34455677744 555666775 67776654 899999999999998873 899999999999999999
Q ss_pred CCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCc
Q 003982 127 SVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPA 205 (782)
Q Consensus 127 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 205 (782)
++++..|.++++|++|+|++|++.. ..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+++..+.
T Consensus 68 ~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 68 GIEPNAFEGASHIQELQLGENKIKE--ISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CBCTTTTTTCTTCCEEECCSCCCCE--ECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CcCHhHcCCcccCCEEECCCCcCCc--cCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 9999999999999999999999998 5566799999999999999999999999999999999999999999977653
No 375
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.72 E-value=6.2e-19 Score=207.10 Aligned_cols=116 Identities=24% Similarity=0.295 Sum_probs=61.7
Q ss_pred CCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCC
Q 003982 155 FPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGM 234 (782)
Q Consensus 155 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l 234 (782)
.+..+..++.|+.|+|++|.+..+ |..+..+++|++|+|++|+|+ .+|..|. ++
T Consensus 216 ~~~~~~~l~~L~~L~Ls~n~l~~l-~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~------------------------~l 269 (727)
T 4b8c_D 216 PKDSKYDDQLWHALDLSNLQIFNI-SANIFKYDFLTRLYLNGNSLT-ELPAEIK------------------------NL 269 (727)
T ss_dssp ------CCCCCCEEECTTSCCSCC-CGGGGGCCSCSCCBCTTSCCS-CCCGGGG------------------------GG
T ss_pred ChhhhccCCCCcEEECCCCCCCCC-ChhhcCCCCCCEEEeeCCcCc-ccChhhh------------------------CC
Confidence 345555666666666666666533 333445666666666666665 5554432 35
Q ss_pred CCCcEEEeecccccCCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCC
Q 003982 235 TQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGP 297 (782)
Q Consensus 235 ~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 297 (782)
++|++|+|++|+|+.++..|..+++|++|+|++|.|+ .+|..|+.+++|+.|+|++|+|++.
T Consensus 270 ~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~ 331 (727)
T 4b8c_D 270 SNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQ 331 (727)
T ss_dssp TTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSH
T ss_pred CCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCC
Confidence 5566666666666544444555555666666655555 4455555555555555555555543
No 376
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.71 E-value=8e-17 Score=155.00 Aligned_cols=139 Identities=27% Similarity=0.418 Sum_probs=119.7
Q ss_pred CCCCCccccceEeCCCCCEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCC
Q 003982 50 SSTGYCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSV 128 (782)
Q Consensus 50 ~~~~~c~w~gv~c~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~ 128 (782)
+..+.|+|++|.|+. ++++ .+|..+ .++|++|++++|++++.++ .|.++++|++|+|++|+|+.+
T Consensus 2 p~~C~C~~~~l~~~~-----------~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 67 (177)
T 2o6r_A 2 PSRCSCSGTEIRCNS-----------KGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSL 67 (177)
T ss_dssp CTTCEEETTEEECCS-----------SCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCC
T ss_pred cCCCEeCCCEEEecC-----------CCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEe
Confidence 345668998888864 3444 455443 3689999999999998887 579999999999999999999
Q ss_pred CCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCC
Q 003982 129 PTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLP 204 (782)
Q Consensus 129 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 204 (782)
++..|.++++|++|+|++|++.. ..+..+..+++|++|+|++|+++++.+..|..+++|++|+|++|++.+..|
T Consensus 68 ~~~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 68 PDGVFDKLTKLTILYLHENKLQS--LPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCC--CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ChhHccCCCccCEEECCCCCccc--cCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99999999999999999999998 445568999999999999999999888888999999999999999997655
No 377
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=2.8e-17 Score=160.44 Aligned_cols=64 Identities=22% Similarity=0.367 Sum_probs=36.7
Q ss_pred eeEEEccCcccccccCccccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcCCCCCC
Q 003982 369 IITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLSGKVP 432 (782)
Q Consensus 369 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p 432 (782)
|++|+|++|+|++..|..|.++++|++|+|++|+|++.+|..|..+++|+.|+|++|++++..+
T Consensus 80 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 80 IQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 3333333333333444445566666666666666666666666666666666666666666554
No 378
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.68 E-value=2.7e-16 Score=153.44 Aligned_cols=128 Identities=23% Similarity=0.267 Sum_probs=113.9
Q ss_pred EEEeCCCCCCcccCccccCCccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCC
Q 003982 70 TISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPN 149 (782)
Q Consensus 70 ~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 149 (782)
.+++++++++ .+|..+. ++|++|+|++|+|+.+++.|.++++|++|+|++|+|+.+++..|.++++|++|+|++|++
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 3555566776 6676554 689999999999997666899999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCC
Q 003982 150 LAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGS 202 (782)
Q Consensus 150 ~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 202 (782)
.. ..|..|..+++|++|+|++|+|+.+.+..|..+++|++|+|++|.+...
T Consensus 91 ~~--i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 91 RC--IPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CB--CCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CE--eCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 98 5567899999999999999999999888999999999999999999753
No 379
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.67 E-value=6.9e-17 Score=171.57 Aligned_cols=141 Identities=14% Similarity=0.121 Sum_probs=104.7
Q ss_pred CCccceeecccceEEEEEEeCCCcEEEEEEeccccCC------------hhh--------HHHHHHHHHHHHhcCCCCcc
Q 003982 583 FSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMG------------NKG--------LSEFQAEIAVLTKVRHRHLV 642 (782)
Q Consensus 583 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------~~~--------~~~~~~E~~~l~~l~h~nI~ 642 (782)
|++.+.||+|++|.||+|...+|+.||||+++..... ... .....+|...|.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999998889999999987643110 000 11235678888888665553
Q ss_pred eEEeEEEeCCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECC
Q 003982 643 ALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGD 722 (782)
Q Consensus 643 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~ 722 (782)
...-+... ..++||||++|+++.++.. ..+...++.|++.+|.|||+ .|||||||||.|||+++
T Consensus 177 vp~p~~~~--~~~LVME~i~G~~L~~l~~-----------~~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 177 VPEPIAQS--RHTIVMSLVDALPMRQVSS-----------VPDPASLYADLIALILRLAK---HGLIHGDFNEFNILIRE 240 (397)
T ss_dssp CCCEEEEE--TTEEEEECCSCEEGGGCCC-----------CSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEEE
T ss_pred CCeeeecc--CceEEEEecCCccHhhhcc-----------cHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeC
Confidence 32222222 2379999999888755421 12345688999999999998 89999999999999987
Q ss_pred CC----------cEEEEeeccceecCC
Q 003982 723 DM----------RAKVADFGLVKNAPD 739 (782)
Q Consensus 723 ~~----------~~kL~DfG~a~~~~~ 739 (782)
++ .+.|+||+-+.....
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~~~h 267 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVSMDH 267 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEETTS
T ss_pred CCCcccccccccceEEEEeCCcccCCC
Confidence 76 389999998876543
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=1.1e-16 Score=152.49 Aligned_cols=136 Identities=21% Similarity=0.207 Sum_probs=123.8
Q ss_pred CCEEEEEeCCCCCC-cccCccccCCccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEec
Q 003982 66 NRVTTISLAKSGLS-GTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSL 144 (782)
Q Consensus 66 ~~v~~L~l~~~~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 144 (782)
.+++.|++++|+++ +.+|..+..+++|++|++++|.|++. +.+..+++|++|+|++|++++..+..+.++++|++|+|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 57899999999998 88999999999999999999999988 88999999999999999999977777888999999999
Q ss_pred cCCCCCCCCCCC--cccCCCcccCeeeccccccCCCCc---ccccCCCCCcEEEcccCcCCCCCCcc
Q 003982 145 SDNPNLAPWPFP--NELTKSTSLTTLYMDNANIFGLIP---DFFDSFSNLQNLRLSYNNFTGSLPAS 206 (782)
Q Consensus 145 s~N~l~~~~~~p--~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls~N~l~~~~p~~ 206 (782)
++|++.. +| ..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+. .+|.+
T Consensus 103 s~N~l~~---~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~~ 165 (168)
T 2ell_A 103 SGNKLKD---ISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPDS 165 (168)
T ss_dssp BSSSCCS---SGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCSS
T ss_pred cCCccCc---chhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hcccc
Confidence 9999988 44 688999999999999999998866 58999999999999999998 66654
No 381
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.64 E-value=7e-17 Score=172.03 Aligned_cols=103 Identities=17% Similarity=0.131 Sum_probs=74.3
Q ss_pred CCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCCCCCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHh
Q 003982 257 CESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQI 336 (782)
Q Consensus 257 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~ 336 (782)
+++|+.|+|++|+++.+.+.+|.++++|+.|+|.+| ++...+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~------------------------------------- 266 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQ------------------------------------- 266 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECT-------------------------------------
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehH-------------------------------------
Confidence 567777777777777666667777777777777766 442211
Q ss_pred hcCCCCCcccccCcCCCCCCCCCCcccccCCcee-EEEccCcccccccCccccccccCCeEecccccccccCCccCCCCC
Q 003982 337 AGDMGYPAILSDSWEGNNACDGWPFVTCSQGRII-TINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLA 415 (782)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 415 (782)
.+|..+.+|+ .|++.+ .++..-+..|.++++|+.|++++|+++..-+..|.+++
T Consensus 267 ------------------------~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~ 321 (329)
T 3sb4_A 267 ------------------------RVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGV 321 (329)
T ss_dssp ------------------------TTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTC
T ss_pred ------------------------HHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCc
Confidence 1244455677 777777 66656667888899999999988998877777888899
Q ss_pred CCCeEec
Q 003982 416 SLQNLDV 422 (782)
Q Consensus 416 ~L~~L~l 422 (782)
+|+.++.
T Consensus 322 ~L~~ly~ 328 (329)
T 3sb4_A 322 PSKLIYK 328 (329)
T ss_dssp CCCEEEC
T ss_pred chhhhcc
Confidence 9988864
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.62 E-value=8.4e-16 Score=146.46 Aligned_cols=83 Identities=25% Similarity=0.355 Sum_probs=45.0
Q ss_pred CCCCEEeCCCCccc--CCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCc
Q 003982 113 TSLQDIYLDNNNFT--SVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQ 190 (782)
Q Consensus 113 ~~L~~L~Ls~n~l~--~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 190 (782)
++|++|+|++|+++ .+|.. +..+++|++|+|++|++.. + ..+..+++|++|+|++|++++.+|..+..+++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~-~~~l~~L~~L~l~~n~l~~---~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGL-TAEFVNLEFLSLINVGLIS---V-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSC-CGGGGGCCEEEEESSCCCC---C-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred ccCCEEECCCCCCChhhHHHH-HHhCCCCCEEeCcCCCCCC---h-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC
Confidence 66777777777776 44332 5555666666666665554 1 4444455555555555555544444444445555
Q ss_pred EEEcccCcCC
Q 003982 191 NLRLSYNNFT 200 (782)
Q Consensus 191 ~L~Ls~N~l~ 200 (782)
+|+|++|+++
T Consensus 99 ~L~Ls~N~l~ 108 (168)
T 2ell_A 99 HLNLSGNKLK 108 (168)
T ss_dssp EEECBSSSCC
T ss_pred EEeccCCccC
Confidence 5555555444
No 383
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=4.4e-15 Score=144.78 Aligned_cols=79 Identities=27% Similarity=0.365 Sum_probs=41.6
Q ss_pred CEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcc
Q 003982 116 QDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLS 195 (782)
Q Consensus 116 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 195 (782)
+++++++|+++.+|...+ ++|++|+|++|++.. +|..|.++++|+.|+|++|+|+++.+..|..+++|++|+|+
T Consensus 13 ~~l~~~~~~l~~ip~~~~---~~l~~L~L~~n~i~~---ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls 86 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIP---RDVTELYLDGNQFTL---VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILS 86 (193)
T ss_dssp TEEECTTSCCSSCCSCCC---TTCCEEECCSSCCCS---CCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCCCcCCCCCC---CCCCEEECCCCcCch---hHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECC
Confidence 345555555555554322 345555555555543 34455555555555555555555555555555555555555
Q ss_pred cCcCC
Q 003982 196 YNNFT 200 (782)
Q Consensus 196 ~N~l~ 200 (782)
+|+|+
T Consensus 87 ~N~l~ 91 (193)
T 2wfh_A 87 YNRLR 91 (193)
T ss_dssp SSCCC
T ss_pred CCccC
Confidence 55555
No 384
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=5.6e-16 Score=144.45 Aligned_cols=128 Identities=22% Similarity=0.201 Sum_probs=96.0
Q ss_pred CCEEEEEeCCCCCC-cccCccccCCccCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEec
Q 003982 66 NRVTTISLAKSGLS-GTLSPEISSLTQLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSL 144 (782)
Q Consensus 66 ~~v~~L~l~~~~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 144 (782)
.+++.|++++|+++ +.+|..+..+++|++|++++|.+++. +.+.++++|++|+|++|++++..+..+.++++|++|++
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 35777888888887 67777778888888888888888776 66777888888888888888755555667788888888
Q ss_pred cCCCCCCCCCCCcccCCCcccCeeeccccccCCCCc---ccccCCCCCcEEEcc
Q 003982 145 SDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIP---DFFDSFSNLQNLRLS 195 (782)
Q Consensus 145 s~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls 195 (782)
++|++... +.+..+..+++|++|++++|.+++..+ ..+..+++|++|+++
T Consensus 96 s~N~i~~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 96 SGNKIKDL-STIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp TTSCCCSH-HHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCcCCCh-HHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 88877661 112667777888888888888877755 567777888888775
No 385
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=1.1e-14 Score=139.92 Aligned_cols=134 Identities=28% Similarity=0.481 Sum_probs=114.5
Q ss_pred cCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeec
Q 003982 91 QLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYM 170 (782)
Q Consensus 91 ~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L 170 (782)
+.+.+++++|+++..+..+. ++|++|+|++|+++++++..|.++++|++|+|++|++.. ..+..+..+++|+.|+|
T Consensus 8 ~~~~l~~~~~~l~~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~l 83 (177)
T 2o6r_A 8 SGTEIRCNSKGLTSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQS--LPDGVFDKLTKLTILYL 83 (177)
T ss_dssp ETTEEECCSSCCSSCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC--CCTTTTTTCTTCCEEEC
T ss_pred CCCEEEecCCCCccCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceE--eChhHccCCCccCEEEC
Confidence 35789999999997765443 799999999999999999999999999999999999987 44556899999999999
Q ss_pred cccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccccCC
Q 003982 171 DNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGP 250 (782)
Q Consensus 171 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 250 (782)
++|+|++..+..|..+++|++|+|++|+++ .+|... +..+++|++|+|++|.+++.
T Consensus 84 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~-----------------------~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 84 HENKLQSLPNGVFDKLTQLKELALDTNQLK-SVPDGI-----------------------FDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTT-----------------------TTTCTTCCEEECCSSCBCCC
T ss_pred CCCCccccCHHHhhCCcccCEEECcCCcce-EeCHHH-----------------------hcCCcccCEEEecCCCeecc
Confidence 999999998888999999999999999999 555432 34578888888888887754
Q ss_pred CC
Q 003982 251 IP 252 (782)
Q Consensus 251 ~~ 252 (782)
.+
T Consensus 140 ~~ 141 (177)
T 2o6r_A 140 CP 141 (177)
T ss_dssp HH
T ss_pred Cc
Confidence 33
No 386
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.58 E-value=5.9e-15 Score=157.08 Aligned_cols=102 Identities=13% Similarity=0.048 Sum_probs=86.1
Q ss_pred CCCCcEEEeecccccCCCC-CCCCCCCCCEEEcCCCcCccCcchhhcCCCCCC-EEEccCCcccCCCCCCCCCccEEEcc
Q 003982 234 MTQLRQVWLHKNQFTGPIP-DLSKCESLFDLSLRDNQLTGVVPASVISLPALL-NISLQNNKLQGPYPLFPSKVQKVSLD 311 (782)
Q Consensus 234 l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~~~~~~~l~~L~l~ 311 (782)
+++|+.|+|++|+++.++. .|.++++|+.|+|.+| ++.+.+.+|.++++|+ .|++.+ +++...+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~------------ 290 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEF------------ 290 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECT------------
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEch------------
Confidence 7899999999999998777 4999999999999998 8878888999999999 999988 5552211
Q ss_pred CCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccccc
Q 003982 312 HNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLT 391 (782)
Q Consensus 312 ~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~ 391 (782)
..|..+++|+.|++++|.++..-+..|.+++
T Consensus 291 -------------------------------------------------~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~ 321 (329)
T 3sb4_A 291 -------------------------------------------------GAFMGCDNLRYVLATGDKITTLGDELFGNGV 321 (329)
T ss_dssp -------------------------------------------------TTTTTCTTEEEEEECSSCCCEECTTTTCTTC
T ss_pred -------------------------------------------------hhhhCCccCCEEEeCCCccCccchhhhcCCc
Confidence 2345567899999999999987778999999
Q ss_pred cCCeEec
Q 003982 392 SLKNLYL 398 (782)
Q Consensus 392 ~L~~L~L 398 (782)
+|+.|+.
T Consensus 322 ~L~~ly~ 328 (329)
T 3sb4_A 322 PSKLIYK 328 (329)
T ss_dssp CCCEEEC
T ss_pred chhhhcc
Confidence 9998864
No 387
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.58 E-value=1.4e-15 Score=141.80 Aligned_cols=84 Identities=21% Similarity=0.289 Sum_probs=50.6
Q ss_pred CCCCCEEeCCCCccc--CCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCC
Q 003982 112 ATSLQDIYLDNNNFT--SVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNL 189 (782)
Q Consensus 112 l~~L~~L~Ls~n~l~--~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 189 (782)
.++|++|++++|+++ .+|. .+..+++|++|+|++|++.. + ..+..+++|++|+|++|.+++.+|..+..+++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~-~~~~l~~L~~L~l~~n~l~~---~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L 90 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEG-LTDEFEELEFLSTINVGLTS---I-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNL 90 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCS-CCTTCTTCCEEECTTSCCCC---C-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTC
T ss_pred CccCeEEEccCCcCChhHHHH-HHhhcCCCcEEECcCCCCCC---c-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCC
Confidence 366777777777777 4443 46666777777777776665 1 445555555555555555555455555555555
Q ss_pred cEEEcccCcCC
Q 003982 190 QNLRLSYNNFT 200 (782)
Q Consensus 190 ~~L~Ls~N~l~ 200 (782)
++|++++|+++
T Consensus 91 ~~L~ls~N~i~ 101 (149)
T 2je0_A 91 THLNLSGNKIK 101 (149)
T ss_dssp CEEECTTSCCC
T ss_pred CEEECCCCcCC
Confidence 55555555554
No 388
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.57 E-value=9.2e-14 Score=151.20 Aligned_cols=171 Identities=11% Similarity=0.183 Sum_probs=111.2
Q ss_pred CccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCe
Q 003982 89 LTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTT 167 (782)
Q Consensus 89 l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~ 167 (782)
...++.+.+.+ .++.+.+ .|.+. +|+.+.|.+| ++.+...+|.+. +|+.++|.. .+.. ..+.+|.++++|+.
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~--I~~~aF~~c~~L~~ 184 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQ--LKEDIFYYCYNLKK 184 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCE--ECSSTTTTCTTCCE
T ss_pred cCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccE--ehHHHhhCcccCCe
Confidence 35666666654 3554555 56663 6888887665 777777777774 688888775 4444 34567777788888
Q ss_pred eeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccc
Q 003982 168 LYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQF 247 (782)
Q Consensus 168 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l 247 (782)
++|.+|+++.+....|. ..+|+.+.|..+ ++ .++.. +|.++++|+.+++..| +
T Consensus 185 l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~-~I~~~-----------------------aF~~~~~L~~l~l~~~-l 237 (401)
T 4fdw_A 185 ADLSKTKITKLPASTFV-YAGIEEVLLPVT-LK-EIGSQ-----------------------AFLKTSQLKTIEIPEN-V 237 (401)
T ss_dssp EECTTSCCSEECTTTTT-TCCCSEEECCTT-CC-EECTT-----------------------TTTTCTTCCCEECCTT-C
T ss_pred eecCCCcceEechhhEe-ecccCEEEeCCc-hh-eehhh-----------------------HhhCCCCCCEEecCCC-c
Confidence 88887777777666776 477888877643 44 33322 3456777777777654 4
Q ss_pred cCCCC-CCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCccc
Q 003982 248 TGPIP-DLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQ 295 (782)
Q Consensus 248 ~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 295 (782)
+.+.. .|.+ .+|+.+.| .|.++.+...+|.++++|+.+++.+|.+.
T Consensus 238 ~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 238 STIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp CEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCC
T ss_pred cCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCcccc
Confidence 44333 3555 67777777 44466566677777777777777777654
No 389
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=5.6e-15 Score=141.89 Aligned_cols=128 Identities=16% Similarity=0.227 Sum_probs=112.3
Q ss_pred CCEEEEEeCCCCCCcccCccccCCc-cCceeecccCccCccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEec
Q 003982 66 NRVTTISLAKSGLSGTLSPEISSLT-QLETLSFQMNNIAGAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSL 144 (782)
Q Consensus 66 ~~v~~L~l~~~~l~~~~~~~l~~l~-~L~~L~L~~N~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 144 (782)
.+++.|++++|+++. ++. +..+. +|++|+|++|.|++. +.|..+++|++|+|++|+|+++++..|..+++|++|+|
T Consensus 19 ~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 95 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELIL 95 (176)
T ss_dssp TSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEEC
T ss_pred CCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEEC
Confidence 468999999999994 554 55555 999999999999987 78999999999999999999999888899999999999
Q ss_pred cCCCCCCCCCCCc--ccCCCcccCeeeccccccCCCCcc----cccCCCCCcEEEcccCcCC
Q 003982 145 SDNPNLAPWPFPN--ELTKSTSLTTLYMDNANIFGLIPD----FFDSFSNLQNLRLSYNNFT 200 (782)
Q Consensus 145 s~N~l~~~~~~p~--~~~~l~~L~~L~L~~N~l~~~~~~----~~~~l~~L~~L~Ls~N~l~ 200 (782)
++|++.. +|. .+..+++|+.|++++|.++.. |. .+..+++|++||+++|.+.
T Consensus 96 ~~N~i~~---~~~~~~l~~l~~L~~L~l~~N~i~~~-~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 96 TNNSLVE---LGDLDPLASLKSLTYLCILRNPVTNK-KHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CSCCCCC---GGGGGGGGGCTTCCEEECCSSGGGGS-TTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCcCCc---chhhHhhhcCCCCCEEEecCCCCCCc-HhHHHHHHHHCCccceeCCCcCCHH
Confidence 9999976 565 788999999999999999866 44 4889999999999999875
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.53 E-value=3.6e-15 Score=143.18 Aligned_cols=87 Identities=18% Similarity=0.246 Sum_probs=40.8
Q ss_pred CCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCC
Q 003982 109 LANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSN 188 (782)
Q Consensus 109 l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 188 (782)
+.++.+|++|+|++|+++.++ ......++|++|+|++|++.. + ..+..+++|++|+|++|+|++..+..|..+++
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i~-~~~~~~~~L~~L~Ls~N~l~~---~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVIE-NLGATLDQFDAIDFSDNEIRK---L-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EECTTSCEEEECTTSCCCSCC-CGGGGTTCCSEEECCSSCCCE---E-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred cCCcCCceEEEeeCCCCchhH-HhhhcCCCCCEEECCCCCCCc---c-cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 444455555555555555442 111212255555555554444 1 23444444444444444444443344455555
Q ss_pred CcEEEcccCcCC
Q 003982 189 LQNLRLSYNNFT 200 (782)
Q Consensus 189 L~~L~Ls~N~l~ 200 (782)
|++|+|++|+++
T Consensus 90 L~~L~L~~N~i~ 101 (176)
T 1a9n_A 90 LTELILTNNSLV 101 (176)
T ss_dssp CCEEECCSCCCC
T ss_pred CCEEECCCCcCC
Confidence 555555555553
No 391
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.50 E-value=1.2e-13 Score=131.57 Aligned_cols=103 Identities=31% Similarity=0.437 Sum_probs=64.7
Q ss_pred EEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCC
Q 003982 70 TISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNP 148 (782)
Q Consensus 70 ~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 148 (782)
.+++++++|+ .+|..+. ++|++|+|++|+|++++| .|.++++|++|+|++|+|+.+++..|.++++|++|+|++|+
T Consensus 13 ~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 3455556666 4555543 667777777777776655 56667777777777777776666666666666666666555
Q ss_pred CCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCC
Q 003982 149 NLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTG 201 (782)
Q Consensus 149 l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 201 (782)
+.. +.+..|..+++|++|+|++|.++.
T Consensus 90 l~~--------------------------~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 90 LKS--------------------------IPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCC--------------------------CCTTTTTTCTTCCEEECCSSCBCT
T ss_pred cCE--------------------------eCHHHhcCCCCCCEEEeCCCCCCC
Confidence 544 444556666666666666666663
No 392
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.50 E-value=6e-13 Score=144.79 Aligned_cols=260 Identities=11% Similarity=0.153 Sum_probs=187.8
Q ss_pred EEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccC
Q 003982 68 VTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSD 146 (782)
Q Consensus 68 v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 146 (782)
++.+.+.+ +++..-..+|.+ .+|+.+.+..| ++.+.. +|.+ .+|+.+.|.+ .++.+...+|.++++|+.++|++
T Consensus 115 l~~i~ip~-~i~~I~~~aF~~-~~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~ 189 (401)
T 4fdw_A 115 YNEIILPN-SVKSIPKDAFRN-SQIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSK 189 (401)
T ss_dssp CSEEECCT-TCCEECTTTTTT-CCCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTT
T ss_pred ccEEEECC-ccCEehHhhccc-CCccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCC
Confidence 44455543 355344456776 48999999877 777766 7877 5799999986 89999999999999999999999
Q ss_pred CCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCcc
Q 003982 147 NPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSG 226 (782)
Q Consensus 147 N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~ 226 (782)
|++.. .....|. ..+|+.+.|.+ .++.+...+|.++++|+.+++..| ++ .++..
T Consensus 190 n~l~~--I~~~aF~-~~~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l~-~I~~~-------------------- 243 (401)
T 4fdw_A 190 TKITK--LPASTFV-YAGIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPEN-VS-TIGQE-------------------- 243 (401)
T ss_dssp SCCSE--ECTTTTT-TCCCSEEECCT-TCCEECTTTTTTCTTCCCEECCTT-CC-EECTT--------------------
T ss_pred CcceE--echhhEe-ecccCEEEeCC-chheehhhHhhCCCCCCEEecCCC-cc-Ccccc--------------------
Confidence 99988 3344555 68999999984 488888899999999999999875 44 34332
Q ss_pred ccccccCCCCCcEEEeecccccCCCC-CCCCCCCCCEEEcCCCcCc-----cCcchhhcCCCCCCEEEccCCcccCCCCC
Q 003982 227 TLDVLSGMTQLRQVWLHKNQFTGPIP-DLSKCESLFDLSLRDNQLT-----GVVPASVISLPALLNISLQNNKLQGPYPL 300 (782)
Q Consensus 227 ~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 300 (782)
+|.+ .+|+.+.+ .|.++.+.. .|.++++|+.+++.+|.+. .+.+.+|.++++|+.++|.+ .++....
T Consensus 244 ---aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~- 316 (401)
T 4fdw_A 244 ---AFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQ- 316 (401)
T ss_dssp ---TTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECT-
T ss_pred ---cccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhh-
Confidence 2334 67888888 445655544 4888888888888877765 45667788888888888773 3442111
Q ss_pred CCCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccc
Q 003982 301 FPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLA 380 (782)
Q Consensus 301 ~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~ 380 (782)
..|..+.+|+.|+|.+| ++
T Consensus 317 ------------------------------------------------------------~aF~~c~~L~~l~lp~~-l~ 335 (401)
T 4fdw_A 317 ------------------------------------------------------------GLLGGNRKVTQLTIPAN-VT 335 (401)
T ss_dssp ------------------------------------------------------------TTTTTCCSCCEEEECTT-CC
T ss_pred ------------------------------------------------------------hhhcCCCCccEEEECcc-cc
Confidence 12333456677777544 55
Q ss_pred cccCccccccccCCeEecccccccccCCccCCCCC-CCCeEecCCCcC
Q 003982 381 GNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLA-SLQNLDVSNNNL 427 (782)
Q Consensus 381 ~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~-~L~~L~ls~N~l 427 (782)
..-+..|.++ +|+.|++++|.+....+..|..++ .++.|++..|.+
T Consensus 336 ~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 336 QINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp EECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred EEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 4555678888 888888888888766667777774 678888877654
No 393
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.49 E-value=1.7e-13 Score=130.55 Aligned_cols=104 Identities=27% Similarity=0.378 Sum_probs=75.2
Q ss_pred CCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEc
Q 003982 115 LQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRL 194 (782)
Q Consensus 115 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 194 (782)
.++|++++|+++.+|...+ ++|++|+|++|++.. ..|..|.++++|++|+|++|+|+++.+..|..+++|++|+|
T Consensus 11 ~~~l~~s~n~l~~ip~~~~---~~l~~L~L~~N~i~~--~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 85 (170)
T 3g39_A 11 GTTVDCSGKSLASVPTGIP---TTTQVLYLYDNQITK--LEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSL 85 (170)
T ss_dssp TTEEECTTSCCSSCCSCCC---TTCSEEECCSSCCCC--CCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCEEEeCCCCcCccCccCC---CCCcEEEcCCCcCCc--cChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEEC
Confidence 3455666666666555432 556666666666666 34556677777777777777777777888899999999999
Q ss_pred ccCcCCCCCCccccc-cccchhhcccccCC
Q 003982 195 SYNNFTGSLPASFAK-SDIQNLWMNDQQLG 223 (782)
Q Consensus 195 s~N~l~~~~p~~~~~-~~l~~l~l~~~~~~ 223 (782)
++|+|++..+..|.. ..|+.|++++|.+.
T Consensus 86 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 86 NDNQLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCCccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 999999555555655 68999999999865
No 394
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.48 E-value=4e-16 Score=153.07 Aligned_cols=106 Identities=25% Similarity=0.337 Sum_probs=54.7
Q ss_pred CcccCeeeccccccCCCCcc------cccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCC
Q 003982 162 STSLTTLYMDNANIFGLIPD------FFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMT 235 (782)
Q Consensus 162 l~~L~~L~L~~N~l~~~~~~------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~ 235 (782)
...++.++++.+.+++..|. .|..+++|++|+|++|++++ +| .+ .+++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~------------------------~~l~ 70 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SL------------------------SGME 70 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CH------------------------HHHT
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-cc------------------------ccCC
Confidence 34455555555555555444 55666666666666666653 44 22 2355
Q ss_pred CCcEEEeecccccCCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCccc
Q 003982 236 QLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQ 295 (782)
Q Consensus 236 ~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 295 (782)
+|+.|++++|+++..+..+..+++|++|+|++|+|++ +| .+..+++|++|++++|+++
T Consensus 71 ~L~~L~l~~n~l~~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~ 128 (198)
T 1ds9_A 71 NLRILSLGRNLIKKIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKIT 128 (198)
T ss_dssp TCCEEEEEEEEECSCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECC
T ss_pred CCCEEECCCCCcccccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCC
Confidence 5666666666555433333334555555555555553 22 3444555555555555444
No 395
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.46 E-value=2.8e-16 Score=154.17 Aligned_cols=153 Identities=22% Similarity=0.304 Sum_probs=86.7
Q ss_pred ccCCccCceeecccCccCccCCC-------CCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcc
Q 003982 86 ISSLTQLETLSFQMNNIAGAIPS-------LANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNE 158 (782)
Q Consensus 86 l~~l~~L~~L~L~~N~l~~~~~~-------l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~ 158 (782)
+.....++.++++.+.+++..|. +..+++|++|+|++|+++.+| .
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l~----------------------------~ 65 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKIS----------------------------S 65 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESCCC----------------------------C
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcccc----------------------------c
Confidence 45566777778888887776553 444555555555555555443 3
Q ss_pred cCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCc
Q 003982 159 LTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLR 238 (782)
Q Consensus 159 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~ 238 (782)
+.++++|++|+|++|+++. +|..+..+++|++|+|++|++++ +| . +.++++|+
T Consensus 66 ~~~l~~L~~L~l~~n~l~~-l~~~~~~~~~L~~L~L~~N~l~~-l~-~------------------------~~~l~~L~ 118 (198)
T 1ds9_A 66 LSGMENLRILSLGRNLIKK-IENLDAVADTLEELWISYNQIAS-LS-G------------------------IEKLVNLR 118 (198)
T ss_dssp HHHHTTCCEEEEEEEEECS-CSSHHHHHHHCSEEEEEEEECCC-HH-H------------------------HHHHHHSS
T ss_pred cccCCCCCEEECCCCCccc-ccchhhcCCcCCEEECcCCcCCc-CC-c------------------------cccCCCCC
Confidence 4444444444444454442 24444445555555555555552 22 1 12355666
Q ss_pred EEEeecccccCCCC--CCCCCCCCCEEEcCCCcCccCcch----------hhcCCCCCCEEEccCCccc
Q 003982 239 QVWLHKNQFTGPIP--DLSKCESLFDLSLRDNQLTGVVPA----------SVISLPALLNISLQNNKLQ 295 (782)
Q Consensus 239 ~L~L~~N~l~~~~~--~~~~l~~L~~L~L~~N~l~~~~p~----------~~~~l~~L~~L~l~~N~l~ 295 (782)
+|++++|++++.++ .+..+++|++|++++|.+++.+|. .+..+++|+.|| +|.++
T Consensus 119 ~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 119 VLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp EEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred EEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 66666666654332 355666666777777766655444 367777787775 66665
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=4.8e-13 Score=127.82 Aligned_cols=103 Identities=29% Similarity=0.467 Sum_probs=69.3
Q ss_pred EEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCC
Q 003982 69 TTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDN 147 (782)
Q Consensus 69 ~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 147 (782)
+.+++++++++ .+|..+. ++|++|+|++|+|++.+| .|.++++|++|+|++|+|+++|+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 46777777775 6666554 677777777777777766 5777777777777777777777666666666666666666
Q ss_pred CCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCC
Q 003982 148 PNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFT 200 (782)
Q Consensus 148 ~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 200 (782)
++.. +.+..|..+++|++|+|++|.+.
T Consensus 92 ~l~~--------------------------l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKS--------------------------IPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCC--------------------------CCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccce--------------------------eCHHHhccccCCCEEEeCCCCcc
Confidence 5554 43444566666666666666666
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=4.3e-13 Score=128.20 Aligned_cols=103 Identities=20% Similarity=0.337 Sum_probs=72.6
Q ss_pred CEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcc
Q 003982 116 QDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLS 195 (782)
Q Consensus 116 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 195 (782)
+.+++++|+++.+|.... ++|++|+|++|++.. ..|..|.++++|++|+|++|+|+++.+..|..+++|++|+|+
T Consensus 15 ~~l~~~~n~l~~iP~~~~---~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~ 89 (174)
T 2r9u_A 15 TLVNCQNIRLASVPAGIP---TDKQRLWLNNNQITK--LEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLN 89 (174)
T ss_dssp SEEECCSSCCSSCCSCCC---TTCSEEECCSSCCCC--CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred cEEEeCCCCCCccCCCcC---CCCcEEEeCCCCccc--cCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECC
Confidence 455555555555555432 556666666666655 345566667777777777777777777778999999999999
Q ss_pred cCcCCCCCCccccc-cccchhhcccccCC
Q 003982 196 YNNFTGSLPASFAK-SDIQNLWMNDQQLG 223 (782)
Q Consensus 196 ~N~l~~~~p~~~~~-~~l~~l~l~~~~~~ 223 (782)
+|+|++..+..|.. ..|+.|++++|.+.
T Consensus 90 ~N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 90 DNHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred CCccceeCHHHhccccCCCEEEeCCCCcc
Confidence 99999444444654 68999999999865
No 398
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.34 E-value=3.6e-11 Score=131.08 Aligned_cols=290 Identities=13% Similarity=0.137 Sum_probs=182.4
Q ss_pred CccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCC-----------
Q 003982 83 SPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNL----------- 150 (782)
Q Consensus 83 ~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~----------- 150 (782)
..+|.+.++|+.+.|.. .++.+.. +|.++++|+.++|.++ ++.+...+|.++++|+.+.+..+-..
T Consensus 64 ~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~ 141 (394)
T 4fs7_A 64 YAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDF 141 (394)
T ss_dssp TTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCC
T ss_pred HHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeecccc
Confidence 34566777777777753 3555555 6777777777777644 66677777777777766665433100
Q ss_pred -C-------CCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCc-cccc-cccchhhcccc
Q 003982 151 -A-------PWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPA-SFAK-SDIQNLWMNDQ 220 (782)
Q Consensus 151 -~-------~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~-~~l~~l~l~~~ 220 (782)
. ......+|.++++|+.+.+.++ +..+....|.++.+|+.+++..| ++ .++. .|.. ..|+.+.+..+
T Consensus 142 ~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~-~I~~~~F~~~~~L~~i~~~~~ 218 (394)
T 4fs7_A 142 KEITIPEGVTVIGDEAFATCESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LK-IIRDYCFAECILLENMEFPNS 218 (394)
T ss_dssp SEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CC-EECTTTTTTCTTCCBCCCCTT
T ss_pred cccccCccccccchhhhcccCCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ce-EeCchhhccccccceeecCCC
Confidence 0 0012356888899999999754 45566778889999999988766 44 3332 3322 23444444333
Q ss_pred cCCCccccccccCCCCCcEEEeecccccCCC-CCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCC
Q 003982 221 QLGLSGTLDVLSGMTQLRQVWLHKNQFTGPI-PDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYP 299 (782)
Q Consensus 221 ~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 299 (782)
..... +......+|+.+.+..+. +... ..+..+.+|+.+.+..+..+ .....|..+..++.+.+..+.+....-
T Consensus 219 ~~~i~---~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~~~F 293 (394)
T 4fs7_A 219 LYYLG---DFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPEKTF 293 (394)
T ss_dssp CCEEC---TTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECTTTT
T ss_pred ceEee---hhhcccCCCceEEECCCc-eecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeeccccc
Confidence 22111 112234677777776432 3222 24777888888888777554 666778888888888877766544333
Q ss_pred CCCCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCccc
Q 003982 300 LFPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLL 379 (782)
Q Consensus 300 ~~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l 379 (782)
....+|+.+.+.++ ++.+. ..++..+.+|+.++|.++ +
T Consensus 294 ~~~~~L~~i~l~~~-i~~I~----------------------------------------~~aF~~c~~L~~i~lp~~-v 331 (394)
T 4fs7_A 294 YGCSSLTEVKLLDS-VKFIG----------------------------------------EEAFESCTSLVSIDLPYL-V 331 (394)
T ss_dssp TTCTTCCEEEECTT-CCEEC----------------------------------------TTTTTTCTTCCEECCCTT-C
T ss_pred cccccccccccccc-cceec----------------------------------------hhhhcCCCCCCEEEeCCc-c
Confidence 33456777776543 33222 123455678888888654 6
Q ss_pred ccccCccccccccCCeEecccccccccCCccCCCCCCCCeEecCCC
Q 003982 380 AGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNN 425 (782)
Q Consensus 380 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N 425 (782)
+..-..+|.++++|+.+++..| ++..-..+|.++++|+.+++..|
T Consensus 332 ~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 332 EEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred cEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 6555668888888998888876 66555678888888888888643
No 399
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.32 E-value=6.1e-12 Score=129.03 Aligned_cols=148 Identities=15% Similarity=0.108 Sum_probs=116.5
Q ss_pred HHHHhcCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcC-CCCcceEEeEEEeCCeE
Q 003982 576 LRQVTDNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGSER 654 (782)
Q Consensus 576 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nI~~~~~~~~~~~~~ 654 (782)
+....+.|++...++.|+.+.||++.. .++.+++|+...... .....+.+|+++++.+. +..++++++++.+.+..
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~--~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~ 85 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYK--GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWS 85 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGT--TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccC--CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCce
Confidence 345667899889999999999999976 468999999875321 12246889999999885 67889999999999999
Q ss_pred EEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC------------------------------
Q 003982 655 LLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLA------------------------------ 704 (782)
Q Consensus 655 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~------------------------------ 704 (782)
|+||||++|.++.+.+. +......++.++++++..||+..
T Consensus 86 ~lv~e~i~G~~l~~~~~----------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (263)
T 3tm0_A 86 NLLMSEADGVLCSEEYE----------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDC 155 (263)
T ss_dssp EEEEECCSSEEHHHHCC----------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSG
T ss_pred EEEEEecCCeehhhccC----------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccc
Confidence 99999999999876531 11223467889999999999721
Q ss_pred --------------------------CCCeEEcCCCCCCEEECCCCcEEEEeecccee
Q 003982 705 --------------------------QQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (782)
Q Consensus 705 --------------------------~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~ 736 (782)
...++|+|++|.||+++++..+.|+||+.+..
T Consensus 156 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 156 ENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp GGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 14599999999999998766667999998754
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.32 E-value=4.3e-12 Score=135.99 Aligned_cols=86 Identities=17% Similarity=0.221 Sum_probs=65.5
Q ss_pred CccccceEeCCCCCEEEEEeCCCCCCcccCccccCCccCceeeccc-CccCccCC-CCCCCCCCCEEeCCCCcccCCCCC
Q 003982 54 YCEWTGINCDNSNRVTTISLAKSGLSGTLSPEISSLTQLETLSFQM-NNIAGAIP-SLANATSLQDIYLDNNNFTSVPTG 131 (782)
Q Consensus 54 ~c~w~gv~c~~~~~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~-N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~ 131 (782)
.|.|..|.|++. |+|+ .+|. |..+++|++|+|++ |.|+++++ .|.++++|++|+|++|+|+++++.
T Consensus 7 ~C~~~~v~~~~~----------n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 7 PHGSSGLRCTRD----------GALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp CSSSSCEECCSS----------CCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred cccCCEEEcCCC----------CCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 588877777541 1566 4777 88888888888885 88888776 688888888888888888888777
Q ss_pred CCCCCCCCCEEeccCCCCCC
Q 003982 132 CFDGLTNLQVLSLSDNPNLA 151 (782)
Q Consensus 132 ~~~~l~~L~~L~Ls~N~l~~ 151 (782)
.|.++++|++|+|++|+|..
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~ 94 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALES 94 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSC
T ss_pred HhcCCcCCCEEeCCCCccce
Confidence 77777777777777776655
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.25 E-value=1.2e-11 Score=132.50 Aligned_cols=105 Identities=20% Similarity=0.248 Sum_probs=96.1
Q ss_pred ceeecccC-ccCccCCCCCCCCCCCEEeCCC-CcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeec
Q 003982 93 ETLSFQMN-NIAGAIPSLANATSLQDIYLDN-NNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYM 170 (782)
Q Consensus 93 ~~L~L~~N-~l~~~~~~l~~l~~L~~L~Ls~-n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L 170 (782)
..++++++ +|+++++ |..+++|++|+|++ |+|+++++..|.++++|++|+|++|+|+. ..|..|.++++|+.|+|
T Consensus 11 ~~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~L~l 87 (347)
T 2ifg_A 11 SGLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRF--VAPDAFHFTPRLSRLNL 87 (347)
T ss_dssp SCEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCE--ECTTGGGSCSCCCEEEC
T ss_pred CEEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccce--eCHHHhcCCcCCCEEeC
Confidence 35788988 9998877 99999999999996 99999999999999999999999999998 56778999999999999
Q ss_pred cccccCCCCcccccCCCCCcEEEcccCcCCC
Q 003982 171 DNANIFGLIPDFFDSFSNLQNLRLSYNNFTG 201 (782)
Q Consensus 171 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 201 (782)
++|+|+++.+..|..++ |++|+|++|.+..
T Consensus 88 ~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 88 SFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp CSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 99999999888887777 9999999999984
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.23 E-value=3.5e-14 Score=153.00 Aligned_cols=61 Identities=20% Similarity=0.208 Sum_probs=30.0
Q ss_pred CCCcEEEeecccccCCCCC-C-----CCCCCCCEEEcCCCcCccC----cchhhcCCCCCCEEEccCCccc
Q 003982 235 TQLRQVWLHKNQFTGPIPD-L-----SKCESLFDLSLRDNQLTGV----VPASVISLPALLNISLQNNKLQ 295 (782)
Q Consensus 235 ~~L~~L~L~~N~l~~~~~~-~-----~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 295 (782)
++|+.|+|++|+|+..... + ...++|++|+|++|.|+.. ++..+..+++|++|+|++|+|+
T Consensus 126 ~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~ 196 (372)
T 3un9_A 126 LRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLG 196 (372)
T ss_dssp HTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCH
T ss_pred HhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCC
Confidence 4455555555555432211 1 2345566666666655432 3333345555555555555554
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.17 E-value=1.9e-13 Score=147.34 Aligned_cols=163 Identities=18% Similarity=0.147 Sum_probs=90.8
Q ss_pred CCCCEEeCCCCcccCCCCCCCC-----CCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccc----
Q 003982 113 TSLQDIYLDNNNFTSVPTGCFD-----GLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFF---- 183 (782)
Q Consensus 113 ~~L~~L~Ls~n~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~---- 183 (782)
+.|++|+|++|.|+......+. ..++|++|+|++|.+.... .......+++|+.|+|++|.|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~-~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAG-LRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHH-HHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHH-HHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 4566666666666543222221 2256666666666654310 01112234566677777776654333333
Q ss_pred -cCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCcEEEeecccccCCC-----CCCCCC
Q 003982 184 -DSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPI-----PDLSKC 257 (782)
Q Consensus 184 -~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~-----~~~~~l 257 (782)
...++|++|+|++|.|+..-...+. ..+..+++|++|+|++|+|+... ..+...
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~--------------------~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~ 210 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLM--------------------EGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRN 210 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHH--------------------HHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGC
T ss_pred HhcCCccceeeCCCCCCChHHHHHHH--------------------HHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcC
Confidence 2456777777777777521111111 12334667777777777776432 124556
Q ss_pred CCCCEEEcCCCcCccC----cchhhcCCCCCCEEEccCCcccC
Q 003982 258 ESLFDLSLRDNQLTGV----VPASVISLPALLNISLQNNKLQG 296 (782)
Q Consensus 258 ~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~ 296 (782)
++|+.|+|++|.|++. ++..+...++|++|+|++|.|++
T Consensus 211 ~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 211 RQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp SCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred CCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 6777788887777653 33444556777777777777763
No 404
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.14 E-value=3.1e-11 Score=123.52 Aligned_cols=139 Identities=20% Similarity=0.139 Sum_probs=102.0
Q ss_pred cCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCC--cceEEeEEEeCCeEEEEE
Q 003982 581 DNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRH--LVALLGYCINGSERLLVY 658 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--I~~~~~~~~~~~~~~lv~ 658 (782)
.+|.+....+.|..+.||++...+|+.+++|+.... ....+.+|+++++.+.+.+ +++++++...++..++||
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~ 94 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLL 94 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC-----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEE
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc-----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEE
Confidence 345444333456679999998777888999987643 1245788999999886544 567888888888899999
Q ss_pred EccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC----------------------------------
Q 003982 659 EYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLA---------------------------------- 704 (782)
Q Consensus 659 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---------------------------------- 704 (782)
||++|.++. ... .+ ...++.++++.+..||+..
T Consensus 95 e~i~G~~l~--~~~--------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (264)
T 1nd4_A 95 GEVPGQDLL--SSH--------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEE 161 (264)
T ss_dssp ECCSSEETT--TSC--------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGG
T ss_pred EecCCcccC--cCc--------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhh
Confidence 999998873 210 11 2256777788888888631
Q ss_pred ---------------------CCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 705 ---------------------QQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 705 ---------------------~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
..+++|+|++|.||+++++..+.|+|||.+...
T Consensus 162 ~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 162 HQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp GTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred ccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 123999999999999987766779999987654
No 405
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.07 E-value=4.8e-09 Score=114.22 Aligned_cols=292 Identities=12% Similarity=0.104 Sum_probs=158.0
Q ss_pred ccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCC
Q 003982 101 NIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLI 179 (782)
Q Consensus 101 ~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 179 (782)
.++.+.. +|.++.+|+.+.|.. .++.+...+|.++++|+.++|..+ +.. .....|.++.+|+.+.+..+ +..+.
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~--I~~~aF~~c~~L~~i~~p~~-l~~i~ 132 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKM--IGRCTFSGCYALKSILLPLM-LKSIG 132 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCE--ECTTTTTTCTTCCCCCCCTT-CCEEC
T ss_pred eEeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceE--ccchhhcccccchhhcccCc-eeeec
Confidence 3555555 799999999999974 599999999999999999999865 444 34567888888888776543 33333
Q ss_pred cccccCCCCCcEEEcccCcCCCCCCccccc-cccchhhcccccCCCccccccccCCCCCcEEEeecccccCCCC-CCCCC
Q 003982 180 PDFFDSFSNLQNLRLSYNNFTGSLPASFAK-SDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIP-DLSKC 257 (782)
Q Consensus 180 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l 257 (782)
..+|.+...++......... .-...|.. ..|+.+.+.++.. .....+|.++++|+.+.+..| ++.... .|.++
T Consensus 133 ~~aF~~~~~~~~~~~~~~~~--i~~~aF~~c~~L~~i~l~~~~~--~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~ 207 (394)
T 4fs7_A 133 VEAFKGCDFKEITIPEGVTV--IGDEAFATCESLEYVSLPDSME--TLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAEC 207 (394)
T ss_dssp TTTTTTCCCSEEECCTTCCE--ECTTTTTTCTTCCEEECCTTCC--EECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTC
T ss_pred ceeeecccccccccCccccc--cchhhhcccCCCcEEecCCccc--eeccccccCCCCceEEEcCCC-ceEeCchhhccc
Confidence 33333333222221111110 00111211 2233333322111 111234556666776666655 333322 36666
Q ss_pred CCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCccc--CCCCCCCCCccEEEccCCcCCCCCCCCCCCCChhhhhHHH
Q 003982 258 ESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQ--GPYPLFPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQ 335 (782)
Q Consensus 258 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~--~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~ 335 (782)
..|+.+.+..+... +.+.+....+|+.+.+.++.-. .........++.+.+..+... +....+..+.
T Consensus 208 ~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~-------- 276 (394)
T 4fs7_A 208 ILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCS-------- 276 (394)
T ss_dssp TTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCT--------
T ss_pred cccceeecCCCceE--eehhhcccCCCceEEECCCceecccccccccccceeEEcCCCcce-eecccccccc--------
Confidence 66666666555433 2233334455666655433211 111112234555555444221 1100000000
Q ss_pred hhcCCCCCcccccCcCCCCCCCCCC-cccccCCceeEEEccCcccccccCccccccccCCeEecccccccccCCccCCCC
Q 003982 336 IAGDMGYPAILSDSWEGNNACDGWP-FVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKL 414 (782)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 414 (782)
.+........ .++ ..+....+|+.+.+.++ ++..-...|.++++|+.++|.++ ++..-..+|.++
T Consensus 277 ---------~l~~~~~~~~---~i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c 342 (394)
T 4fs7_A 277 ---------GLKKVIYGSV---IVPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGC 342 (394)
T ss_dssp ---------TCCEEEECSS---EECTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTC
T ss_pred ---------ccceeccCce---eeccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCC
Confidence 0000000000 011 23455678888888765 66555678999999999999754 665557889999
Q ss_pred CCCCeEecCCCcCC
Q 003982 415 ASLQNLDVSNNNLS 428 (782)
Q Consensus 415 ~~L~~L~ls~N~l~ 428 (782)
++|+.+++..| ++
T Consensus 343 ~~L~~i~lp~~-l~ 355 (394)
T 4fs7_A 343 TSLSNINFPLS-LR 355 (394)
T ss_dssp TTCCEECCCTT-CC
T ss_pred CCCCEEEECcc-cc
Confidence 99999998766 54
No 406
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.03 E-value=1.1e-08 Score=111.42 Aligned_cols=128 Identities=14% Similarity=0.233 Sum_probs=69.2
Q ss_pred CCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCCCC---CCccEEEccCCcCCCCCCCCCCCCChh
Q 003982 253 DLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLFP---SKVQKVSLDHNNFCKNSSDAGKPCDPQ 329 (782)
Q Consensus 253 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~---~~l~~L~l~~N~~~~~~~~~~~~~~~~ 329 (782)
.|..+.+|+.+.+.++..+ ....+|.+++.|+.+.+. +.++......+ .+|+.++|..+ ++.+.
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~---------- 326 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQIL---------- 326 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEEC----------
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEeh----------
Confidence 4777788888888766544 566777788888888875 33443222222 34555555432 22211
Q ss_pred hhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCccccccccCCeEecccccccccCCc
Q 003982 330 VTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPD 409 (782)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 409 (782)
..+|..+.+|+.+.|..+ ++..-..+|.++++|+.+++.+|.... .
T Consensus 327 ------------------------------~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~ 372 (394)
T 4gt6_A 327 ------------------------------DDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---N 372 (394)
T ss_dssp ------------------------------TTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---H
T ss_pred ------------------------------HhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---h
Confidence 123444566777777544 444444567777777777777765442 3
Q ss_pred cCCCCCCCCeEecCCCcC
Q 003982 410 GLTKLASLQNLDVSNNNL 427 (782)
Q Consensus 410 ~~~~l~~L~~L~ls~N~l 427 (782)
.+.....|+.+.+..|.+
T Consensus 373 ~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 373 AISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TCBCCCCC----------
T ss_pred hhhccCCCCEEEeCCCCE
Confidence 556666777776665544
No 407
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.02 E-value=8.8e-10 Score=118.47 Aligned_cols=144 Identities=13% Similarity=0.226 Sum_probs=108.1
Q ss_pred CccceeecccceEEEEEEeCCCcEEEEEEec--cccCChhhHHHHHHHHHHHHhcC--CCCcceEEeEEEeC---CeEEE
Q 003982 584 SEANILGRGGFGVVYGGELPDGTKIAVKRME--SNTMGNKGLSEFQAEIAVLTKVR--HRHLVALLGYCING---SERLL 656 (782)
Q Consensus 584 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~E~~~l~~l~--h~nI~~~~~~~~~~---~~~~l 656 (782)
...+.++.|.++.||+.... +..+++|+.. .... ......+.+|+++++.+. +..++++++++.+. +..|+
T Consensus 41 ~~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~-~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~ 118 (359)
T 3dxp_A 41 LSVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKL-LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFY 118 (359)
T ss_dssp CEEEECCC-CCSCEEEEECS-SCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEE
T ss_pred ceEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCC-CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEE
Confidence 34678899999999999874 4688899876 3221 122357889999999997 45688999888776 45899
Q ss_pred EEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC--------------------------------
Q 003982 657 VYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLA-------------------------------- 704 (782)
Q Consensus 657 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-------------------------------- 704 (782)
||||++|..+.+.. ...++..++..++.+++++|..||+..
T Consensus 119 vme~v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (359)
T 3dxp_A 119 IMEFVSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSET 191 (359)
T ss_dssp EEECCCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCC
T ss_pred EEEecCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCC
Confidence 99999987774321 123678888999999999999999721
Q ss_pred -----------------------CCCeEEcCCCCCCEEECCCCc--EEEEeecccee
Q 003982 705 -----------------------QQSFIHRDLKPSNILIGDDMR--AKVADFGLVKN 736 (782)
Q Consensus 705 -----------------------~~~ivHrDikp~NIll~~~~~--~kL~DfG~a~~ 736 (782)
..+++|+|+++.||+++.++. +.|+||+.+..
T Consensus 192 ~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 192 ESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp SCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred cCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999997753 68999998864
No 408
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.98 E-value=2.5e-08 Score=108.44 Aligned_cols=291 Identities=11% Similarity=0.123 Sum_probs=182.9
Q ss_pred ccccCC-ccCceeecccCccCccCC-CCCCCCCCCEEeCCCCc---ccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcc
Q 003982 84 PEISSL-TQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNN---FTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNE 158 (782)
Q Consensus 84 ~~l~~l-~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~---l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~ 158 (782)
.+|.+. ..|+.+.+..+ ++.+.. +|.++.+|+.+.+..|. ++.+...+|.++.+|+.+.+..+ +.. .....
T Consensus 57 ~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~--I~~~a 132 (394)
T 4gt6_A 57 RVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTE--IDSEA 132 (394)
T ss_dssp TTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSE--ECTTT
T ss_pred hhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cce--ehhhh
Confidence 346555 35888888654 666665 78888888888887764 77788888888888888887655 333 23456
Q ss_pred cCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCCc
Q 003982 159 LTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQLR 238 (782)
Q Consensus 159 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~ 238 (782)
|..+.+|+.+.+.. .+..+....|..+.+|+.+.+..+ ++..-...|....|+.+.+..+-. .....+|.++.++.
T Consensus 133 F~~c~~L~~i~lp~-~~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~~~l~~i~ip~~~~--~i~~~af~~c~~l~ 208 (394)
T 4gt6_A 133 FHHCEELDTVTIPE-GVTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTGTALTQIHIPAKVT--RIGTNAFSECFALS 208 (394)
T ss_dssp TTTCTTCCEEECCT-TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCCCSEEEECTTCC--EECTTTTTTCTTCC
T ss_pred hhhhcccccccccc-eeeeecccceecccccccccccce-eeEeccccccccceeEEEECCccc--ccccchhhhccccc
Confidence 78888888888864 455566677888888888888655 331223334334444444432211 11123456666676
Q ss_pred EEEeecccccCCCCC--------------CCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCC---C
Q 003982 239 QVWLHKNQFTGPIPD--------------LSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPL---F 301 (782)
Q Consensus 239 ~L~L~~N~l~~~~~~--------------~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~---~ 301 (782)
......+........ +.....+..+.+. +.++.....+|.+++.|+.+.+.++... .... .
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~ 286 (394)
T 4gt6_A 209 TITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMN 286 (394)
T ss_dssp EEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTT
T ss_pred eecccccccccccceeecccccccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccce-ecCccccc
Confidence 666655544322111 1122344444443 2344455667888888888888765433 1111 1
Q ss_pred CCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCccccc
Q 003982 302 PSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAG 381 (782)
Q Consensus 302 ~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~ 381 (782)
...|+.+.+.. .++.+. ...|..+.+|+.++|..+ ++.
T Consensus 287 c~~L~~i~l~~-~i~~I~----------------------------------------~~aF~~c~~L~~i~lp~~-v~~ 324 (394)
T 4gt6_A 287 CPALQDIEFSS-RITELP----------------------------------------ESVFAGCISLKSIDIPEG-ITQ 324 (394)
T ss_dssp CTTCCEEECCT-TCCEEC----------------------------------------TTTTTTCTTCCEEECCTT-CCE
T ss_pred ccccccccCCC-cccccC----------------------------------------ceeecCCCCcCEEEeCCc-ccE
Confidence 24566666642 232222 123555678999999765 665
Q ss_pred ccCccccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcC
Q 003982 382 NISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNL 427 (782)
Q Consensus 382 ~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l 427 (782)
.-...|.++++|+.+.|..+ ++..-..+|.++++|+.+++.+|..
T Consensus 325 I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 325 ILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp ECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred ehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 55678999999999999755 6645567899999999999988754
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.86 E-value=1.9e-10 Score=122.72 Aligned_cols=158 Identities=15% Similarity=0.111 Sum_probs=86.7
Q ss_pred CCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCccccc--CCCCCcEEEccc--CcCCCCC-Ccccc
Q 003982 134 DGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFD--SFSNLQNLRLSY--NNFTGSL-PASFA 208 (782)
Q Consensus 134 ~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~--N~l~~~~-p~~~~ 208 (782)
..+|+|+.|+|++|.-.. ++. + .+++|+.|+|..|.+.......+. .+++|++|+|+. |...+.. ...+.
T Consensus 169 ~~~P~L~~L~L~g~~~l~---l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~ 243 (362)
T 2ra8_A 169 DAMPLLNNLKIKGTNNLS---IGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFR 243 (362)
T ss_dssp HTCTTCCEEEEECCBTCB---CCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTG
T ss_pred hcCCCCcEEEEeCCCCce---ecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHH
Confidence 344556666665552111 222 2 256777777776665433223333 677888887753 2222111 00110
Q ss_pred ccccchhhcccccCCCccccccccCCCCCcEEEeecccccCCCC-C---CCCCCCCCEEEcCCCcCccCc----chhhcC
Q 003982 209 KSDIQNLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPIP-D---LSKCESLFDLSLRDNQLTGVV----PASVIS 280 (782)
Q Consensus 209 ~~~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~---~~~l~~L~~L~L~~N~l~~~~----p~~~~~ 280 (782)
. + -....+++|+.|+|++|++++... . ...+++|++|+|+.|.|++.. +..+..
T Consensus 244 ~-----~-------------l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~ 305 (362)
T 2ra8_A 244 P-----L-------------FSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDK 305 (362)
T ss_dssp G-----G-------------SCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHH
T ss_pred H-----H-------------HhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhccc
Confidence 0 0 001236788888888888764221 1 235678888888888887643 333445
Q ss_pred CCCCCEEEccCCcccCCCCCCCCC-c-cEEEccCCc
Q 003982 281 LPALLNISLQNNKLQGPYPLFPSK-V-QKVSLDHNN 314 (782)
Q Consensus 281 l~~L~~L~l~~N~l~~~~~~~~~~-l-~~L~l~~N~ 314 (782)
+++|+.|+|++|.+++..-..+.. + ..+++++++
T Consensus 306 l~~L~~L~L~~n~i~d~~~~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 306 IKHLKFINMKYNYLSDEMKKELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp HTTCSEEECCSBBCCHHHHHHHHHHCCSEEECCSBC
T ss_pred CCcceEEECCCCcCCHHHHHHHHHHcCCEEEecCCc
Confidence 688888888888877533222221 2 457777776
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.81 E-value=2.8e-09 Score=113.62 Aligned_cols=141 Identities=16% Similarity=0.177 Sum_probs=85.9
Q ss_pred ccCCCCCcEEEeeccc-ccCCCCCCCCCCCCCEEEcCCCcCccCcchhhc--CCCCCCEEEccC--CcccCCCCCCCCCc
Q 003982 231 LSGMTQLRQVWLHKNQ-FTGPIPDLSKCESLFDLSLRDNQLTGVVPASVI--SLPALLNISLQN--NKLQGPYPLFPSKV 305 (782)
Q Consensus 231 ~~~l~~L~~L~L~~N~-l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~l~~--N~l~~~~~~~~~~l 305 (782)
+..+|+|+.|+|++|. +. .+.+. +++|+.|+|..|.++......+. .+++|+.|+|+. |...+... ...+
T Consensus 168 l~~~P~L~~L~L~g~~~l~--l~~~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~--~~~l 242 (362)
T 2ra8_A 168 LDAMPLLNNLKIKGTNNLS--IGKKP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGD--MNVF 242 (362)
T ss_dssp HHTCTTCCEEEEECCBTCB--CCSCB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSC--GGGT
T ss_pred HhcCCCCcEEEEeCCCCce--ecccc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchh--HHHH
Confidence 4567889999998873 22 22343 78899999988888765555554 688888888863 22111100 0000
Q ss_pred cEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccccCc
Q 003982 306 QKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGNISP 385 (782)
Q Consensus 306 ~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~~p~ 385 (782)
.. .+. ...+++|++|+|.+|.+.+..+.
T Consensus 243 ~~--------------------------------------------------~l~--~~~~p~Lr~L~L~~~~i~~~~~~ 270 (362)
T 2ra8_A 243 RP--------------------------------------------------LFS--KDRFPNLKWLGIVDAEEQNVVVE 270 (362)
T ss_dssp GG--------------------------------------------------GSC--TTTCTTCCEEEEESCTTHHHHHH
T ss_pred HH--------------------------------------------------HHh--cCCCCCcCEEeCCCCCCchHHHH
Confidence 00 000 01235777777777777654443
Q ss_pred ccc---ccccCCeEeccccccccc----CCccCCCCCCCCeEecCCCcCC
Q 003982 386 AYA---NLTSLKNLYLQQNNLTGP----IPDGLTKLASLQNLDVSNNNLS 428 (782)
Q Consensus 386 ~~~---~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~ls~N~l~ 428 (782)
.+. .+++|++|+|+.|+|.+. ++..+..+++|+.|+|++|.++
T Consensus 271 ~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 271 MFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp HHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred HHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 333 467788888888887763 3444455678888888888775
No 411
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.77 E-value=1e-08 Score=107.28 Aligned_cols=137 Identities=19% Similarity=0.268 Sum_probs=101.6
Q ss_pred cceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcC-CCC--cceEEeEEEeCC---eEEEEEE
Q 003982 586 ANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRH--LVALLGYCINGS---ERLLVYE 659 (782)
Q Consensus 586 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~n--I~~~~~~~~~~~---~~~lv~e 659 (782)
.+.++.|....||+.. ..+++|+.... .....+.+|+++++.+. +.. +++++....... ..|+|||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~ 96 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFT 96 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEc
Confidence 5668999999999863 56889986432 34577899999999884 333 455655543333 3489999
Q ss_pred ccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-----------------------------------
Q 003982 660 YMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLA----------------------------------- 704 (782)
Q Consensus 660 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~----------------------------------- 704 (782)
+++|.++.+.... .++..++..++.++++.+..||+..
T Consensus 97 ~i~G~~l~~~~~~-------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
T 3sg8_A 97 KIKGVPLTPLLLN-------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQ 169 (304)
T ss_dssp CCCCEECCHHHHH-------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHH
T ss_pred ccCCeECCccccc-------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCccc
Confidence 9999888754322 3677888888899999888888611
Q ss_pred --------------------CCCeEEcCCCCCCEEECC--CCcEEEEeeccceec
Q 003982 705 --------------------QQSFIHRDLKPSNILIGD--DMRAKVADFGLVKNA 737 (782)
Q Consensus 705 --------------------~~~ivHrDikp~NIll~~--~~~~kL~DfG~a~~~ 737 (782)
...++|+|++|.||++++ ...+.++||+.+...
T Consensus 170 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~ 224 (304)
T 3sg8_A 170 MKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS 224 (304)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence 135899999999999988 456789999988654
No 412
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.76 E-value=4.3e-11 Score=121.06 Aligned_cols=147 Identities=17% Similarity=0.172 Sum_probs=86.3
Q ss_pred CccccceEeCCC-CCEEEEEeCC---CCCCcccCc-cccCCccCceeecccCccCccCC--CCCCCCCCCE--EeCCCCc
Q 003982 54 YCEWTGINCDNS-NRVTTISLAK---SGLSGTLSP-EISSLTQLETLSFQMNNIAGAIP--SLANATSLQD--IYLDNNN 124 (782)
Q Consensus 54 ~c~w~gv~c~~~-~~v~~L~l~~---~~l~~~~~~-~l~~l~~L~~L~L~~N~l~~~~~--~l~~l~~L~~--L~Ls~n~ 124 (782)
.|.|.|+.|+.. .+|+.+...+ ..+.+.+++ .+..++. .|...+|.-++..+ .|...+.|.. ++++.|+
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 588999999864 3666655544 233333332 2333322 23344444444332 2444455554 5666664
Q ss_pred ccCCCC---CCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCC--CCcEEEcccCcC
Q 003982 125 FTSVPT---GCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFS--NLQNLRLSYNNF 199 (782)
Q Consensus 125 l~~~~~---~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~Ls~N~l 199 (782)
...++. ....++++|+.|+|++|++.....+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+
T Consensus 155 ~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl 232 (267)
T 3rw6_A 155 RSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSL 232 (267)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTT
T ss_pred HHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcC
Confidence 443221 122456777777777777776433455666778888888888888775 2233333 888889998888
Q ss_pred CCCCC
Q 003982 200 TGSLP 204 (782)
Q Consensus 200 ~~~~p 204 (782)
.+.+|
T Consensus 233 ~~~~~ 237 (267)
T 3rw6_A 233 CDTFR 237 (267)
T ss_dssp GGGCS
T ss_pred ccccC
Confidence 87666
No 413
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.73 E-value=8.4e-08 Score=101.05 Aligned_cols=138 Identities=18% Similarity=0.255 Sum_probs=104.7
Q ss_pred CCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCC----CCcceEEeEEEeCCeEEEE
Q 003982 582 NFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRH----RHLVALLGYCINGSERLLV 657 (782)
Q Consensus 582 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h----~nI~~~~~~~~~~~~~~lv 657 (782)
.+...+.++.|....||+. +..+++|+... ......+.+|.++++.+.+ ..+++++++ +..++|
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~----~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lv 105 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR----DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNI 105 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc----HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEE
Confidence 5667888999999999988 67788997643 2234568999999998876 235666655 567899
Q ss_pred EEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCC--------------------------------
Q 003982 658 YEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQ-------------------------------- 705 (782)
Q Consensus 658 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~-------------------------------- 705 (782)
|||++|.++..... ..++..+...++.++++.+..||+...
T Consensus 106 me~i~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (320)
T 3r70_A 106 MKYIKGERITYEQY-------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKE 178 (320)
T ss_dssp EECCCCBCCCHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHT
T ss_pred EeecCCcccccccc-------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhc
Confidence 99999988864331 236777777888888888888885221
Q ss_pred ----------------------------CCeEEcCCCCCCEEECCCCcEEEEeeccceecC
Q 003982 706 ----------------------------QSFIHRDLKPSNILIGDDMRAKVADFGLVKNAP 738 (782)
Q Consensus 706 ----------------------------~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~ 738 (782)
..++|+|++|.||+++.+..+.|+||+.+....
T Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 179 QLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp TCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred ccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 235999999999999987667999999886543
No 414
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.73 E-value=6.5e-07 Score=96.68 Aligned_cols=293 Identities=10% Similarity=0.107 Sum_probs=152.7
Q ss_pred CEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEecc
Q 003982 67 RVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLS 145 (782)
Q Consensus 67 ~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 145 (782)
+++++.+.. +++..-..+|.+..+|+.++|..+ ++.+.. +|.+. +|+.+.+.. +++.+...+|.+. +|+.+++.
T Consensus 47 ~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~-~l~~I~~~aF~~~-~L~~i~lp 121 (379)
T 4h09_A 47 RISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGME-RVKKFGDYVFQGT-DLDDFEFP 121 (379)
T ss_dssp GCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECT-TCCEECTTTTTTC-CCSEEECC
T ss_pred CCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCc-eeeEeccceeccC-CcccccCC
Confidence 355555542 344333445666667777766543 554444 55554 566666543 3666666666554 56777665
Q ss_pred CCCCCCCCCCCcccCCCcccCeeeccccccCCCCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCc
Q 003982 146 DNPNLAPWPFPNELTKSTSLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLS 225 (782)
Q Consensus 146 ~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~ 225 (782)
.+- .. .....|.+. +|+.+.+.. .++.+....|....+++.+.+..+.........+... .. .
T Consensus 122 ~~~-~~--i~~~~F~~~-~l~~~~~~~-~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~--------~~----~ 184 (379)
T 4h09_A 122 GAT-TE--IGNYIFYNS-SVKRIVIPK-SVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYN--------KN----K 184 (379)
T ss_dssp TTC-CE--ECTTTTTTC-CCCEEEECT-TCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEE--------TT----S
T ss_pred Ccc-cc--ccccccccc-eeeeeeccc-eeeccccchhcccccccccccccccceeecccceecc--------cc----c
Confidence 442 11 112233332 444444432 3444445566666777777666554331111000000 00 0
Q ss_pred cccccccCCCCCcEEEeecccccCCCCCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCCcccCCCCCC---C
Q 003982 226 GTLDVLSGMTQLRQVWLHKNQFTGPIPDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNNKLQGPYPLF---P 302 (782)
Q Consensus 226 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~---~ 302 (782)
.....+.....+..+.+..+.-.-....+..+.+|+.+.+..+ +......+|.++..|+.+.+..+ ++...... .
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~ 262 (379)
T 4h09_A 185 TILESYPAAKTGTEFTIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNC 262 (379)
T ss_dssp SEEEECCTTCCCSEEECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTC
T ss_pred ceeccccccccccccccccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCcccccee
Confidence 0001122334444444433322222233555666666666544 33344556666666666666554 33222221 2
Q ss_pred CCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCceeEEEccCcccccc
Q 003982 303 SKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRIITINLANKLLAGN 382 (782)
Q Consensus 303 ~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L~~L~Ls~N~l~~~ 382 (782)
.+|+.+.+..+ +..+. ...+..+.+|+.+++.++.++..
T Consensus 263 ~~l~~i~l~~~-i~~i~----------------------------------------~~aF~~c~~L~~i~l~~~~i~~I 301 (379)
T 4h09_A 263 TALKTLNFYAK-VKTVP----------------------------------------YLLCSGCSNLTKVVMDNSAIETL 301 (379)
T ss_dssp TTCCEEEECCC-CSEEC----------------------------------------TTTTTTCTTCCEEEECCTTCCEE
T ss_pred ehhcccccccc-ceecc----------------------------------------cccccccccccccccccccccee
Confidence 24455544322 21111 11244557888888888888866
Q ss_pred cCccccccccCCeEecccccccccCCccCCCCCCCCeEecCCC
Q 003982 383 ISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNN 425 (782)
Q Consensus 383 ~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N 425 (782)
-...|.++.+|+.+.|..+ ++..-..+|.++++|+.+.+..|
T Consensus 302 ~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 302 EPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred hhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 6778889999999999755 66455677888888988887543
No 415
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.51 E-value=7.4e-07 Score=91.94 Aligned_cols=145 Identities=23% Similarity=0.237 Sum_probs=95.1
Q ss_pred CCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCC---CcceEEeEEEeCCeEEEEEE
Q 003982 583 FSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHR---HLVALLGYCINGSERLLVYE 659 (782)
Q Consensus 583 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---nI~~~~~~~~~~~~~~lv~e 659 (782)
....+.|+.|.++.||++...+|+.++||+..... ......+.+|++.++.+++. .+++++++. ..++|||
T Consensus 17 ~~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~--~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme 90 (288)
T 3d1u_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAME 90 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEE
T ss_pred ccceeeeCCcchhheEEEEeCCCCeEEEEecCCCC--cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEE
Confidence 34467899999999999988889999999865432 12346789999999999865 588888763 3689999
Q ss_pred ccCCCCH--------HHHHHhhccCCCC-------------------CCCHHHHH-----------------------HH
Q 003982 660 YMPRGTL--------AQHLFEWHDHGYT-------------------PLTWKQRV-----------------------TI 689 (782)
Q Consensus 660 ~~~~gsL--------~~~l~~~~~~~~~-------------------~l~~~~~~-----------------------~i 689 (782)
|++++++ .+.+.+.+..... .-+|.+.. ..
T Consensus 91 ~l~g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~ 170 (288)
T 3d1u_A 91 WVDERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRL 170 (288)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHH
T ss_pred ecccCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 9998864 2333333322110 01233221 11
Q ss_pred HHHHHHHHHHH-hhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccce
Q 003982 690 ALDVARGVEYL-HSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (782)
Q Consensus 690 ~~qi~~aL~~L-H~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~ 735 (782)
+.+++..+..+ -......++|+|+.+.||+++. +.+.++|| .+.
T Consensus 171 ~~~l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~ 215 (288)
T 3d1u_A 171 VEKVLDALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAH 215 (288)
T ss_dssp HHHHHHTHHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred HHHHHHHHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence 11222222211 1112478999999999999988 45889999 654
No 416
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.50 E-value=1.1e-06 Score=91.88 Aligned_cols=137 Identities=18% Similarity=0.196 Sum_probs=97.7
Q ss_pred cceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCC---CcceEEeEEE-eCCeEEEEEEcc
Q 003982 586 ANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHR---HLVALLGYCI-NGSERLLVYEYM 661 (782)
Q Consensus 586 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---nI~~~~~~~~-~~~~~~lv~e~~ 661 (782)
.+.++.|....||+. +..+++|+... ......+.+|+++++.+.+. .+++++.+.. ..+..++||||+
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i 95 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKV 95 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEecc
Confidence 466888888899987 56788997532 23457899999999999742 4677777774 445678999999
Q ss_pred CCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhc--------------------------------------
Q 003982 662 PRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSL-------------------------------------- 703 (782)
Q Consensus 662 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-------------------------------------- 703 (782)
+|..+.+... ..++..+...++.++++.|..||+.
T Consensus 96 ~G~~l~~~~~-------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~ 168 (306)
T 3tdw_A 96 QGQILGEDGM-------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL 168 (306)
T ss_dssp CSEECHHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred CCeECchhhh-------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence 9988766321 1234555555566666666555542
Q ss_pred -------------------CCCCeEEcCCCCCCEEECC---CCc-EEEEeeccceec
Q 003982 704 -------------------AQQSFIHRDLKPSNILIGD---DMR-AKVADFGLVKNA 737 (782)
Q Consensus 704 -------------------~~~~ivHrDikp~NIll~~---~~~-~kL~DfG~a~~~ 737 (782)
....++|+|++|.||+++. ++. +.|+||+.+..-
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 1236799999999999987 455 589999987654
No 417
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.48 E-value=1.1e-06 Score=89.96 Aligned_cols=137 Identities=18% Similarity=0.148 Sum_probs=100.9
Q ss_pred ceeecccce-EEEEEEeC-CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcC-CCCcceEEeEEEeCCeEEEEEEccCC
Q 003982 587 NILGRGGFG-VVYGGELP-DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGSERLLVYEYMPR 663 (782)
Q Consensus 587 ~~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nI~~~~~~~~~~~~~~lv~e~~~~ 663 (782)
+.+..|..+ .||+.... ++..+++|+-... ....+.+|.+.++.+. +--++++++++.+++..++|||+++|
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G 104 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS-----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPG 104 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH-----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCS
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC-----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCC
Confidence 345556655 68988654 5678999986532 3467889999998885 44478899999999999999999999
Q ss_pred CCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC---------------------------------------
Q 003982 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLA--------------------------------------- 704 (782)
Q Consensus 664 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--------------------------------------- 704 (782)
.++.+.... ...+...++.+++..|..||...
T Consensus 105 ~~~~~~~~~---------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (272)
T 4gkh_A 105 KTAFQVLEE---------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWP 175 (272)
T ss_dssp EEHHHHHHH---------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCC
T ss_pred ccccccccC---------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchH
Confidence 888776533 11233456677777777777520
Q ss_pred ----------------CCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 705 ----------------QQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 705 ----------------~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
...++|+|+.+.||++++++.+-|+||+.+..-
T Consensus 176 ~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~g 224 (272)
T 4gkh_A 176 VEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIA 224 (272)
T ss_dssp HHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccC
Confidence 123899999999999998777789999987643
No 418
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.33 E-value=2.6e-06 Score=91.08 Aligned_cols=149 Identities=13% Similarity=0.154 Sum_probs=94.0
Q ss_pred cCCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCC--cceEEeEEEeC-CeEEEE
Q 003982 581 DNFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRH--LVALLGYCING-SERLLV 657 (782)
Q Consensus 581 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--I~~~~~~~~~~-~~~~lv 657 (782)
......+.++.|....+|+... ++..+++|+.... ..+.+|+.+++.+.... ++++++++.+. +..|+|
T Consensus 41 ~~~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv 112 (362)
T 3ovc_A 41 DSVSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCI 112 (362)
T ss_dssp SCCEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEE
T ss_pred CCCceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEE
Confidence 3444567889999999999876 6889999987432 25889999999887533 56788777654 678999
Q ss_pred EEccCCCCHH---------------HHHHhhccCCCC-----------C----CCHHHH---------------------
Q 003982 658 YEYMPRGTLA---------------QHLFEWHDHGYT-----------P----LTWKQR--------------------- 686 (782)
Q Consensus 658 ~e~~~~gsL~---------------~~l~~~~~~~~~-----------~----l~~~~~--------------------- 686 (782)
|||++|.++. +.+.+.+..... . -+|.+.
T Consensus 113 ~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~ 192 (362)
T 3ovc_A 113 SRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVS 192 (362)
T ss_dssp EECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTH
T ss_pred EEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 9999875543 122222211000 0 011111
Q ss_pred HHHHHHHHHHHHHHhhc-CCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 687 VTIALDVARGVEYLHSL-AQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 687 ~~i~~qi~~aL~~LH~~-~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
......+....+++... ....++|+|+++.||++++++.+.|+||+.+..-
T Consensus 193 ~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 193 ASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred ccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 01111111222223211 0146899999999999987777889999988654
No 419
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.32 E-value=4.1e-08 Score=94.40 Aligned_cols=42 Identities=26% Similarity=0.219 Sum_probs=21.3
Q ss_pred cccccccCCeEec--cccccccc----CCccCCCCCCCCeEecCCCcC
Q 003982 386 AYANLTSLKNLYL--QQNNLTGP----IPDGLTKLASLQNLDVSNNNL 427 (782)
Q Consensus 386 ~~~~l~~L~~L~L--s~N~l~g~----~p~~~~~l~~L~~L~ls~N~l 427 (782)
.+...+.|++|+| ++|+|... +.+.+...+.|+.|+|++|.+
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 3444455555555 55555432 223333445566666666654
No 420
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.32 E-value=3.6e-08 Score=94.80 Aligned_cols=116 Identities=14% Similarity=0.218 Sum_probs=65.2
Q ss_pred CCCcccCeeecccc-ccCC----CCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCC
Q 003982 160 TKSTSLTTLYMDNA-NIFG----LIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGM 234 (782)
Q Consensus 160 ~~l~~L~~L~L~~N-~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l 234 (782)
...++|++|+|++| .|.. .+...+...++|++|+|++|+|...-...++ ..+...
T Consensus 33 ~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~--------------------~~L~~n 92 (185)
T 1io0_A 33 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALA--------------------EMLKVN 92 (185)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHH--------------------HHHHHC
T ss_pred hcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHH--------------------HHHHhC
Confidence 33444555555554 4432 1234455566677777777776521111111 112234
Q ss_pred CCCcEEEeecccccCC-----CCCCCCCCCCCEEEc--CCCcCccC----cchhhcCCCCCCEEEccCCccc
Q 003982 235 TQLRQVWLHKNQFTGP-----IPDLSKCESLFDLSL--RDNQLTGV----VPASVISLPALLNISLQNNKLQ 295 (782)
Q Consensus 235 ~~L~~L~L~~N~l~~~-----~~~~~~l~~L~~L~L--~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 295 (782)
++|++|+|++|+|+.. ...+...++|++|+| ++|.|+.. +...+...+.|++|+|++|.+.
T Consensus 93 ~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 93 NTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp SSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred CCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 6677777777777652 123556667778888 67777754 3344555677888888777775
No 421
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.31 E-value=4.7e-08 Score=98.74 Aligned_cols=104 Identities=22% Similarity=0.313 Sum_probs=77.8
Q ss_pred ccCCccCce--eecccCccC---ccCC-CCCCCCCCCEEeCCCCcccCCCC--CCCCCCCCCCEEeccCCCCCCCCCCCc
Q 003982 86 ISSLTQLET--LSFQMNNIA---GAIP-SLANATSLQDIYLDNNNFTSVPT--GCFDGLTNLQVLSLSDNPNLAPWPFPN 157 (782)
Q Consensus 86 l~~l~~L~~--L~L~~N~l~---~~~~-~l~~l~~L~~L~Ls~n~l~~~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~p~ 157 (782)
+...+.|+. ++++.|... +..+ ...++++|++|+|++|+|++++. ..+..+++|+.|+|++|++... .
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~----~ 212 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE----R 212 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG----G
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc----h
Confidence 455556665 777777543 2222 22568899999999999998763 5567899999999999999883 3
Q ss_pred ccCCCc--ccCeeeccccccCCCCc-------ccccCCCCCcEEE
Q 003982 158 ELTKST--SLTTLYMDNANIFGLIP-------DFFDSFSNLQNLR 193 (782)
Q Consensus 158 ~~~~l~--~L~~L~L~~N~l~~~~~-------~~~~~l~~L~~L~ 193 (782)
.+..++ +|+.|+|++|.+.+.+| ..+..+++|+.||
T Consensus 213 ~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 213 ELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 444444 89999999999987655 3477899999987
No 422
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.28 E-value=6.4e-05 Score=80.84 Aligned_cols=270 Identities=13% Similarity=0.080 Sum_probs=145.3
Q ss_pred CEEEEEeCCCCCCcccCccccCCccCceeecccCccCccCC-CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEecc
Q 003982 67 RVTTISLAKSGLSGTLSPEISSLTQLETLSFQMNNIAGAIP-SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLS 145 (782)
Q Consensus 67 ~v~~L~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 145 (782)
.+++++|.. .++..-..+|.+. +|+.+.+..+ ++.+.. .|.+ .+|+.+.+..+ ++.+...+|.+. +|+.+.+.
T Consensus 70 ~L~~I~lp~-~v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~ 143 (379)
T 4h09_A 70 NMTKVTVAS-TVTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEFPGA-TTEIGNYIFYNS-SVKRIVIP 143 (379)
T ss_dssp TCCEEEECT-TCCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEECCTT-CCEECTTTTTTC-CCCEEEEC
T ss_pred CCCEEEeCC-cceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccCCCc-cccccccccccc-eeeeeecc
Confidence 578888864 3664444556665 6888777644 555555 5655 48999999754 667777777765 56666665
Q ss_pred CCCCCCCCCCCcccCCCcccCeeeccccccCCC------------CcccccCCCCCcEEEcccCcCCCCCCccccccccc
Q 003982 146 DNPNLAPWPFPNELTKSTSLTTLYMDNANIFGL------------IPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQ 213 (782)
Q Consensus 146 ~N~l~~~~~~p~~~~~l~~L~~L~L~~N~l~~~------------~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~ 213 (782)
.+ +.. .....+..+..++.+.+..+..... ....+.....+..+.+..+.-. ...
T Consensus 144 ~~-v~~--i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~--------- 210 (379)
T 4h09_A 144 KS-VTT--IKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKT-VTA--------- 210 (379)
T ss_dssp TT-CCE--ECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCE-ECT---------
T ss_pred ce-eec--cccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeE-Eee---------
Confidence 44 222 2345667777777777665443211 1122333333444333222111 111
Q ss_pred hhhcccccCCCccccccccCCCCCcEEEeecccccCCC-CCCCCCCCCCEEEcCCCcCccCcchhhcCCCCCCEEEccCC
Q 003982 214 NLWMNDQQLGLSGTLDVLSGMTQLRQVWLHKNQFTGPI-PDLSKCESLFDLSLRDNQLTGVVPASVISLPALLNISLQNN 292 (782)
Q Consensus 214 ~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 292 (782)
..+....+|+.+.+..+ ++... ..|..+..|+.+.+..+ ++.+...+|.++.+|+.+.+..+
T Consensus 211 ---------------~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~ 273 (379)
T 4h09_A 211 ---------------YGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK 273 (379)
T ss_dssp ---------------TTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC
T ss_pred ---------------cccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc
Confidence 12333445555555433 22121 23455555555555444 44344445555555555555433
Q ss_pred cccCCCCC---CCCCccEEEccCCcCCCCCCCCCCCCChhhhhHHHhhcCCCCCcccccCcCCCCCCCCCCcccccCCce
Q 003982 293 KLQGPYPL---FPSKVQKVSLDHNNFCKNSSDAGKPCDPQVTTLLQIAGDMGYPAILSDSWEGNNACDGWPFVTCSQGRI 369 (782)
Q Consensus 293 ~l~~~~~~---~~~~l~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~L 369 (782)
+...... ...+|+.+.+.++.++.+. +..|..+.+|
T Consensus 274 -i~~i~~~aF~~c~~L~~i~l~~~~i~~I~----------------------------------------~~aF~~c~~L 312 (379)
T 4h09_A 274 -VKTVPYLLCSGCSNLTKVVMDNSAIETLE----------------------------------------PRVFMDCVKL 312 (379)
T ss_dssp -CSEECTTTTTTCTTCCEEEECCTTCCEEC----------------------------------------TTTTTTCTTC
T ss_pred -ceeccccccccccccccccccccccceeh----------------------------------------hhhhcCCCCC
Confidence 2211111 1234555555554443333 1234455678
Q ss_pred eEEEccCcccccccCccccccccCCeEecccccccccCCccCCCCC
Q 003982 370 ITINLANKLLAGNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLA 415 (782)
Q Consensus 370 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 415 (782)
+.++|..+ ++..-..+|.++++|+.+.+..+ ++..-..+|.+..
T Consensus 313 ~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 313 SSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp CEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred CEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 88888755 66555668999999999999765 5544456666554
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.16 E-value=2.9e-06 Score=90.70 Aligned_cols=82 Identities=7% Similarity=-0.051 Sum_probs=56.2
Q ss_pred ccee-ecccceEEEEEEeC-------CCcEEEEEEeccccC-ChhhHHHHHHHHHHHHhcC-C--CCcceEEeEEEeC--
Q 003982 586 ANIL-GRGGFGVVYGGELP-------DGTKIAVKRMESNTM-GNKGLSEFQAEIAVLTKVR-H--RHLVALLGYCING-- 651 (782)
Q Consensus 586 ~~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h--~nI~~~~~~~~~~-- 651 (782)
.+.| +.|....+|+.... +++.+++|+...... .......+.+|+++++.+. + -.++++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 4567 78888999988653 267899998654320 0001245788889888885 3 3577888877654
Q ss_pred -CeEEEEEEccCCCCHH
Q 003982 652 -SERLLVYEYMPRGTLA 667 (782)
Q Consensus 652 -~~~~lv~e~~~~gsL~ 667 (782)
+..++||||++|..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 3568999999886653
No 424
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.06 E-value=2.8e-05 Score=82.39 Aligned_cols=144 Identities=17% Similarity=0.242 Sum_probs=82.1
Q ss_pred ceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcC--CCCcceEEe------EEEeCCeEEEEE
Q 003982 587 NILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR--HRHLVALLG------YCINGSERLLVY 658 (782)
Q Consensus 587 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~nI~~~~~------~~~~~~~~~lv~ 658 (782)
+.|+.|..+.||+....++ .+++|+.... ..++..|.++++.+. .-.+++++. +....+..+++|
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~------~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~ 110 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP------EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVY 110 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC------HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC------HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEE
Confidence 4455577889999977544 5899998752 133445555555553 113344443 123467789999
Q ss_pred EccCCCCHH-----------HHHHhhc---cCC--C-------CCCCHHHH-----------------------------
Q 003982 659 EYMPRGTLA-----------QHLFEWH---DHG--Y-------TPLTWKQR----------------------------- 686 (782)
Q Consensus 659 e~~~~gsL~-----------~~l~~~~---~~~--~-------~~l~~~~~----------------------------- 686 (782)
||++|..+. +.+.+.+ ..- . ..-.|...
T Consensus 111 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 190 (346)
T 2q83_A 111 DWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQ 190 (346)
T ss_dssp ECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred EeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHH
Confidence 999986542 1122211 110 0 00122111
Q ss_pred --HHHHHHHHHHHHHHhh----------cCCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 687 --VTIALDVARGVEYLHS----------LAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 687 --~~i~~qi~~aL~~LH~----------~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
..+..++..++++|++ ....+++|+|+++.||+++.++.+.++||+.+..-
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~g 253 (346)
T 2q83_A 191 EIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFD 253 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEEC
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcccC
Confidence 1111223445666652 02478999999999999988889999999987543
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.91 E-value=4.2e-05 Score=82.90 Aligned_cols=77 Identities=12% Similarity=0.113 Sum_probs=51.3
Q ss_pred cceeecccceEEEEEEeC-CCcEEEEEEeccccC--C---hhhHHHHHHHHHHHHhcCC--C-CcceEEeEEEeCCeEEE
Q 003982 586 ANILGRGGFGVVYGGELP-DGTKIAVKRMESNTM--G---NKGLSEFQAEIAVLTKVRH--R-HLVALLGYCINGSERLL 656 (782)
Q Consensus 586 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~---~~~~~~~~~E~~~l~~l~h--~-nI~~~~~~~~~~~~~~l 656 (782)
.+.+|.|..+.||++... +++.|+||....... . .....++..|.++++.+.. | .+++++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 567899999999999653 468899998754321 0 1123467789999888742 3 45566644 4556789
Q ss_pred EEEccCCC
Q 003982 657 VYEYMPRG 664 (782)
Q Consensus 657 v~e~~~~g 664 (782)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999763
No 426
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.65 E-value=0.00032 Score=73.40 Aligned_cols=161 Identities=15% Similarity=0.179 Sum_probs=90.1
Q ss_pred ccHHHHHHHhcCCCc-----cceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCC--cce
Q 003982 571 ISIEVLRQVTDNFSE-----ANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRH--LVA 643 (782)
Q Consensus 571 ~~~~~l~~~~~~y~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--I~~ 643 (782)
++.+.+..+...|.+ .+.|+.|....+|+....++ .+++|+..... ....+..|+++++.+.... +++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~----~~~~l~~e~~~l~~L~~~g~~vP~ 81 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV----EKNDLPFFLGLMQHLAAKGLSCPL 81 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC----CHHHHHHHHHHHHHHHHCCCCCCc
Confidence 455666666666765 24466688889999977555 68899887521 1234566777777664212 333
Q ss_pred EEeE------EEeCCeEEEEEEccCCCCHH-----------HHHHhhccC--CC--C---CC---CHHHHHH--------
Q 003982 644 LLGY------CINGSERLLVYEYMPRGTLA-----------QHLFEWHDH--GY--T---PL---TWKQRVT-------- 688 (782)
Q Consensus 644 ~~~~------~~~~~~~~lv~e~~~~gsL~-----------~~l~~~~~~--~~--~---~l---~~~~~~~-------- 688 (782)
++.. ....+..+++|+|++|..+. +.+.+.+.. +. . .. .|.....
T Consensus 82 ~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 161 (322)
T 2ppq_A 82 PLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADE 161 (322)
T ss_dssp BCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGG
T ss_pred ccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHh
Confidence 3321 12346678999999886531 112121110 00 0 01 1221100
Q ss_pred ----HHHHHHHHHHHHhhc----CCCCeEEcCCCCCCEEECCCCcEEEEeecccee
Q 003982 689 ----IALDVARGVEYLHSL----AQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (782)
Q Consensus 689 ----i~~qi~~aL~~LH~~----~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~ 736 (782)
+...+...++++++. ...+++|+|+++.||+++++..+.++||+.+..
T Consensus 162 ~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 162 VEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp TSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011234445555531 135899999999999998876668999987753
No 427
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.64 E-value=0.00087 Score=69.46 Aligned_cols=141 Identities=18% Similarity=0.162 Sum_probs=95.1
Q ss_pred ccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcC---CCCcceEEeEEEeCCeEEEEEEcc
Q 003982 585 EANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR---HRHLVALLGYCINGSERLLVYEYM 661 (782)
Q Consensus 585 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~nI~~~~~~~~~~~~~~lv~e~~ 661 (782)
..+.|+.|....+|+... ++..+++|+.... ....+.+|++.|+.+. ...+++++++....+..++||||+
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l 113 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL 113 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence 356789999999999976 5778899987542 3567899999999884 367889999988888999999999
Q ss_pred CCCCH--------HHHHHhhccCCC-C-------------------CCCHHHHH---HHH----------------HHHH
Q 003982 662 PRGTL--------AQHLFEWHDHGY-T-------------------PLTWKQRV---TIA----------------LDVA 694 (782)
Q Consensus 662 ~~gsL--------~~~l~~~~~~~~-~-------------------~l~~~~~~---~i~----------------~qi~ 694 (782)
++..+ .+.+.+.+.... . .-+|.+.. ++. .+++
T Consensus 114 ~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~ 193 (312)
T 3jr1_A 114 NKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIV 193 (312)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHH
T ss_pred cCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Confidence 98754 223333332211 0 01344321 111 1111
Q ss_pred HHH-HHHhh-cCCCCeEEcCCCCCCEEECCCCcEEEEeec
Q 003982 695 RGV-EYLHS-LAQQSFIHRDLKPSNILIGDDMRAKVADFG 732 (782)
Q Consensus 695 ~aL-~~LH~-~~~~~ivHrDikp~NIll~~~~~~kL~DfG 732 (782)
..+ ..|.. .....++|+|+.+.|++++.++ +.++||.
T Consensus 194 ~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 194 QIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 111 23321 1246899999999999999887 8999984
No 428
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.60 E-value=0.00032 Score=76.46 Aligned_cols=76 Identities=16% Similarity=0.214 Sum_probs=48.3
Q ss_pred ccceeecccceEEEEEEeCCCcEEEEEEeccccC--Ch-----hhHHHHHHHHHHHHh-cCCCCcceEEeEEEeCCeEEE
Q 003982 585 EANILGRGGFGVVYGGELPDGTKIAVKRMESNTM--GN-----KGLSEFQAEIAVLTK-VRHRHLVALLGYCINGSERLL 656 (782)
Q Consensus 585 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~-----~~~~~~~~E~~~l~~-l~h~nI~~~~~~~~~~~~~~l 656 (782)
..+.+|.|....||++.. +++.++||....... .. .....++.|+..+.. .....+++++.+. ++..++
T Consensus 38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l 114 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI 114 (420)
T ss_dssp EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence 357789999999999965 567899995432111 01 123344444443332 2235677777665 567799
Q ss_pred EEEcc-CC
Q 003982 657 VYEYM-PR 663 (782)
Q Consensus 657 v~e~~-~~ 663 (782)
||||+ ++
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 76
No 429
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.56 E-value=0.00053 Score=70.53 Aligned_cols=79 Identities=22% Similarity=0.249 Sum_probs=58.1
Q ss_pred CCCccceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcC-C--CCcceEEeEEEeCCeEEEEE
Q 003982 582 NFSEANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-H--RHLVALLGYCINGSERLLVY 658 (782)
Q Consensus 582 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h--~nI~~~~~~~~~~~~~~lv~ 658 (782)
....++.+|.|..+.||+.+..+|+.|+||+..... ......|..|++.|+.+. . -.+++++++ + ..++||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~--~~~lv~ 89 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D--DRTLAM 89 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E--TTEEEE
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCC--cchhhHHHHHHHHHHHHHhhCCCCcceEEec--c--CceEEE
Confidence 445578899999999999999999999999875433 222356889999999885 2 235566654 2 247899
Q ss_pred EccCCCCH
Q 003982 659 EYMPRGTL 666 (782)
Q Consensus 659 e~~~~gsL 666 (782)
||++++..
T Consensus 90 e~l~~~~~ 97 (288)
T 3f7w_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EeecccCC
Confidence 99987653
No 430
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.41 E-value=0.00043 Score=72.85 Aligned_cols=146 Identities=16% Similarity=0.127 Sum_probs=76.2
Q ss_pred cceeecccceE-EEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCC--CCcceEEeEEEeCCeEEEEEEccC
Q 003982 586 ANILGRGGFGV-VYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRH--RHLVALLGYCINGSERLLVYEYMP 662 (782)
Q Consensus 586 ~~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~nI~~~~~~~~~~~~~~lv~e~~~ 662 (782)
.+.|+.|.... +|+....++..+++|...... ...+..|+++++.+.. -.+++++.+..+.+ +++||++.
T Consensus 23 ~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~-----~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~ 95 (333)
T 3csv_A 23 RTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE-----GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLG 95 (333)
T ss_dssp ECC--------CCEEEECTTCCEEEEEECCTTT-----TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCC
T ss_pred eeECCCCCCCceEEEEEcCCCCeEEEEECCCCC-----CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCC
Confidence 34565555444 667765447778888654422 0234556777776642 23567776643333 78999997
Q ss_pred CCCHHHHHHh------------------hccCC---CCCCCHHHHH-------H-H------------HHHHHHHHHHHh
Q 003982 663 RGTLAQHLFE------------------WHDHG---YTPLTWKQRV-------T-I------------ALDVARGVEYLH 701 (782)
Q Consensus 663 ~gsL~~~l~~------------------~~~~~---~~~l~~~~~~-------~-i------------~~qi~~aL~~LH 701 (782)
+..+.+.+.. .+... ...++..... . + ...+...++.+.
T Consensus 96 ~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~ 175 (333)
T 3csv_A 96 DALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQIL 175 (333)
T ss_dssp SCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred CcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 7666543321 11110 1112221110 0 0 001112222221
Q ss_pred ---hcCCCCeEEcCCCCCCEEECCC----CcEEEEeeccceecC
Q 003982 702 ---SLAQQSFIHRDLKPSNILIGDD----MRAKVADFGLVKNAP 738 (782)
Q Consensus 702 ---~~~~~~ivHrDikp~NIll~~~----~~~kL~DfG~a~~~~ 738 (782)
......++|+|+.+.||+++.+ +.+.++||+.+..-.
T Consensus 176 ~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~ 219 (333)
T 3csv_A 176 SAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH 219 (333)
T ss_dssp HHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred HhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence 1123689999999999999875 689999999886543
No 431
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.39 E-value=0.0012 Score=69.14 Aligned_cols=144 Identities=13% Similarity=0.077 Sum_probs=82.6
Q ss_pred ceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCC--CcceEEeE-----EEeCCeEEEEEE
Q 003982 587 NILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHR--HLVALLGY-----CINGSERLLVYE 659 (782)
Q Consensus 587 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~--nI~~~~~~-----~~~~~~~~lv~e 659 (782)
+.++ |....||+....+|+.+++|+...... ....+..|.++++.+... .+++++.. ....+..+++||
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~---~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~ 107 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERW---TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFP 107 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTS---CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCC---CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEE
Confidence 4566 778899998776787899999864321 235667788888777422 23444432 223556789999
Q ss_pred ccCCCCHH-----------HHHHhhcc---C-C---CCCCCHHHH----HHH---------------HHHHHHHHHHHhh
Q 003982 660 YMPRGTLA-----------QHLFEWHD---H-G---YTPLTWKQR----VTI---------------ALDVARGVEYLHS 702 (782)
Q Consensus 660 ~~~~gsL~-----------~~l~~~~~---~-~---~~~l~~~~~----~~i---------------~~qi~~aL~~LH~ 702 (782)
|++|..+. +.+.+.+. . . ....++... ..+ ...+-..++.+.+
T Consensus 108 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (328)
T 1zyl_A 108 SVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTA 187 (328)
T ss_dssp CCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 99874431 11111111 0 0 011222111 001 1111112223321
Q ss_pred c----CCCCeEEcCCCCCCEEECCCCcEEEEeecccee
Q 003982 703 L----AQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (782)
Q Consensus 703 ~----~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~ 736 (782)
. ....++|+|+++.||+++ + .+.++||+.+..
T Consensus 188 ~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 188 HWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1 235789999999999999 4 899999987654
No 432
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.33 E-value=0.00043 Score=71.73 Aligned_cols=141 Identities=13% Similarity=0.071 Sum_probs=78.5
Q ss_pred cceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCc-ceEEeEEEeCCeEEEEEEcc-CC
Q 003982 586 ANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHL-VALLGYCINGSERLLVYEYM-PR 663 (782)
Q Consensus 586 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-~~~~~~~~~~~~~~lv~e~~-~~ 663 (782)
.+.|+.|....+|+. ..+++|+..... ....+..+|+++++.+....+ ++++++ +++.-++++||+ ++
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~---~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g 92 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGT---EEYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGA 92 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTC
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCc---cceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCC
Confidence 678899999999998 568899876532 111223568888877753233 566554 444457899999 65
Q ss_pred CCHHH---------------HHHhhccCCC---CCCCH-HHHHHHHHH--------------HHHHHHHHh----h-cCC
Q 003982 664 GTLAQ---------------HLFEWHDHGY---TPLTW-KQRVTIALD--------------VARGVEYLH----S-LAQ 705 (782)
Q Consensus 664 gsL~~---------------~l~~~~~~~~---~~l~~-~~~~~i~~q--------------i~~aL~~LH----~-~~~ 705 (782)
.++.. .+.+.+.... ..... ..+..+..+ +.+.+..+. . ...
T Consensus 93 ~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~ 172 (301)
T 3dxq_A 93 QTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLP 172 (301)
T ss_dssp EECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCC
Confidence 44421 1222222211 00111 111111111 111111111 0 123
Q ss_pred CCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 706 QSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 706 ~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
..++|+|+.+.||+ ..++.+.++||..+..-
T Consensus 173 ~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 173 LAACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp CEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred ceeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 56899999999999 55667899999987643
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.31 E-value=0.00033 Score=62.35 Aligned_cols=56 Identities=21% Similarity=0.375 Sum_probs=39.1
Q ss_pred eeecccCccC--ccCCCCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEeccCCCCCC
Q 003982 94 TLSFQMNNIA--GAIPSLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSLSDNPNLA 151 (782)
Q Consensus 94 ~L~L~~N~l~--~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 151 (782)
.++.+++.++ .++..+. ++|++|+|++|+|+.++.+.|..+++|++|+|++|.+.=
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec
Confidence 3444555554 3332222 468888888888888888888888888888888886543
No 434
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.27 E-value=5.7e-05 Score=70.59 Aligned_cols=35 Identities=20% Similarity=0.070 Sum_probs=22.7
Q ss_pred ccCeeeccccc-cCCCCcccccCCCCCcEEEcccCc
Q 003982 164 SLTTLYMDNAN-IFGLIPDFFDSFSNLQNLRLSYNN 198 (782)
Q Consensus 164 ~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~ 198 (782)
+|++|+|++|. |+..--..+..+++|++|+|+++.
T Consensus 115 ~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 115 SMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESCT
T ss_pred CCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCCC
Confidence 46666666653 554333456677888888888775
No 435
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.12 E-value=0.0013 Score=70.04 Aligned_cols=144 Identities=14% Similarity=0.199 Sum_probs=86.0
Q ss_pred cceeecccceEEEEEEeC--------CCcEEEEEEeccccCChhhHHHHHHHHHHHHhcC-CCCcceEEeEEEeCCeEEE
Q 003982 586 ANILGRGGFGVVYGGELP--------DGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGSERLL 656 (782)
Q Consensus 586 ~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nI~~~~~~~~~~~~~~l 656 (782)
.+.+..|-...+|++... +++.|++|+.... ......+.+|.++++.+. +.-.+++++++.+ .+
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~---~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~ 127 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI---LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GR 127 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc---cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----cc
Confidence 456777888899999764 3478999986332 123466779999998885 3334667666533 29
Q ss_pred EEEccCCCCHH--------------HHHHhhccCC---CCCC--CHHHHHHHHHHHHH-------------------HHH
Q 003982 657 VYEYMPRGTLA--------------QHLFEWHDHG---YTPL--TWKQRVTIALDVAR-------------------GVE 698 (782)
Q Consensus 657 v~e~~~~gsL~--------------~~l~~~~~~~---~~~l--~~~~~~~i~~qi~~-------------------aL~ 698 (782)
||||++|..+. +.+.+.+... ..+. -+.++.++..++-. .++
T Consensus 128 v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 207 (379)
T 3feg_A 128 LEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMG 207 (379)
T ss_dssp EEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHH
T ss_pred EEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHH
Confidence 99999875432 2233333321 1112 23455555544322 233
Q ss_pred HHhh-----cCCCCeEEcCCCCCCEEECCC----CcEEEEeecccee
Q 003982 699 YLHS-----LAQQSFIHRDLKPSNILIGDD----MRAKVADFGLVKN 736 (782)
Q Consensus 699 ~LH~-----~~~~~ivHrDikp~NIll~~~----~~~kL~DfG~a~~ 736 (782)
.|.+ .....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 208 ~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 208 NLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 3321 123579999999999999876 7899999997753
No 436
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.03 E-value=7.8e-05 Score=71.05 Aligned_cols=113 Identities=12% Similarity=0.176 Sum_probs=60.7
Q ss_pred cccCeeecccc-ccCC----CCcccccCCCCCcEEEcccCcCCCCCCccccccccchhhcccccCCCccccccccCCCCC
Q 003982 163 TSLTTLYMDNA-NIFG----LIPDFFDSFSNLQNLRLSYNNFTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGMTQL 237 (782)
Q Consensus 163 ~~L~~L~L~~N-~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l~~L 237 (782)
+.|+.|+|++| +|.. .+.+.+..-+.|+.|+|++|+|...--..++. ++..-+.|
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~--------------------aL~~N~tL 100 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIE--------------------LIETSPSL 100 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHH--------------------HHHHCSSC
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHH--------------------HHhcCCcc
Confidence 34555555543 4321 12344555566777777777765222222211 22234667
Q ss_pred cEEEeecccccCCCC-----CCCCCCCCCEEEcCCC---cCccC----cchhhcCCCCCCEEEccCCccc
Q 003982 238 RQVWLHKNQFTGPIP-----DLSKCESLFDLSLRDN---QLTGV----VPASVISLPALLNISLQNNKLQ 295 (782)
Q Consensus 238 ~~L~L~~N~l~~~~~-----~~~~l~~L~~L~L~~N---~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 295 (782)
+.|+|++|+|+.... .+...+.|+.|+|++| .+... +.+.+..-+.|+.|+++.|.+.
T Consensus 101 ~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 101 RVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp CEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred CeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 777777777764222 2555666777777754 33322 3444555667777777766543
No 437
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.02 E-value=0.00068 Score=60.29 Aligned_cols=57 Identities=23% Similarity=0.325 Sum_probs=44.6
Q ss_pred eEEEccCcccc-cccCccccccccCCeEecccccccccCCccCCCCCCCCeEecCCCcCC
Q 003982 370 ITINLANKLLA-GNISPAYANLTSLKNLYLQQNNLTGPIPDGLTKLASLQNLDVSNNNLS 428 (782)
Q Consensus 370 ~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 428 (782)
..++.+++.|+ ..+|..+. .+|++|+|++|+|+..-+..|..+++|+.|+|++|++.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 47888999887 35666554 47899999999999666777888999999888877664
No 438
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.99 E-value=0.00014 Score=69.30 Aligned_cols=37 Identities=14% Similarity=0.114 Sum_probs=17.7
Q ss_pred cccCCeEecccc---cccc----cCCccCCCCCCCCeEecCCCc
Q 003982 390 LTSLKNLYLQQN---NLTG----PIPDGLTKLASLQNLDVSNNN 426 (782)
Q Consensus 390 l~~L~~L~Ls~N---~l~g----~~p~~~~~l~~L~~L~ls~N~ 426 (782)
-+.|++|+|++| .+.. .+-+.+..-+.|+.|+++.|.
T Consensus 125 N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 125 TQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp TCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred CCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 344566666543 2221 133344445566666665443
No 439
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.74 E-value=0.00034 Score=65.30 Aligned_cols=84 Identities=14% Similarity=0.143 Sum_probs=48.4
Q ss_pred ccCeeeccccccCCCCcccccCCCCCcEEEcccCc-CCCCCCccccccccchhhcccccCCCccccccccCC----CCCc
Q 003982 164 SLTTLYMDNANIFGLIPDFFDSFSNLQNLRLSYNN-FTGSLPASFAKSDIQNLWMNDQQLGLSGTLDVLSGM----TQLR 238 (782)
Q Consensus 164 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~~~l~~l~l~~~~~~~~~~~~~~~~l----~~L~ 238 (782)
+|+.|||+++.|+..--..+..+++|++|+|++|. ++..--. .++.+ ++|+
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~------------------------~L~~~~~~~~~L~ 117 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLE------------------------RLSQLENLQKSML 117 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHH------------------------HHHTCHHHHHHCC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHH------------------------HHHhcccccCCCC
Confidence 45666666665554444455677777777777774 4411111 12222 3677
Q ss_pred EEEeeccc-ccCCC-CCCCCCCCCCEEEcCCCc-Cc
Q 003982 239 QVWLHKNQ-FTGPI-PDLSKCESLFDLSLRDNQ-LT 271 (782)
Q Consensus 239 ~L~L~~N~-l~~~~-~~~~~l~~L~~L~L~~N~-l~ 271 (782)
+|+|++|. ++... ..+..+++|++|+|+++. ++
T Consensus 118 ~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c~~It 153 (176)
T 3e4g_A 118 EMEIISCGNVTDKGIIALHHFRNLKYLFLSDLPGVK 153 (176)
T ss_dssp EEEEESCTTCCHHHHHHGGGCTTCCEEEEESCTTCC
T ss_pred EEEcCCCCcCCHHHHHHHhcCCCCCEEECCCCCCCC
Confidence 77777763 65422 235667888888888775 44
No 440
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.72 E-value=0.0053 Score=66.81 Aligned_cols=72 Identities=19% Similarity=0.218 Sum_probs=49.0
Q ss_pred cceeecccceEEEEEEeCC--------CcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCC-cceEEeEEEeCCeEEE
Q 003982 586 ANILGRGGFGVVYGGELPD--------GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRH-LVALLGYCINGSERLL 656 (782)
Q Consensus 586 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-I~~~~~~~~~~~~~~l 656 (782)
.+.|+.|-...+|++...+ ++.+++|+..... ....+.+|..+++.+...+ .+++++.+. + .+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~----~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~ 149 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE----TESHLVAESVIFTLLSERHLGPKLYGIFS--G--GR 149 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC----CHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC----cHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CE
Confidence 4667888889999997653 5789999884321 1145557999988885333 367776543 2 38
Q ss_pred EEEccCCCC
Q 003982 657 VYEYMPRGT 665 (782)
Q Consensus 657 v~e~~~~gs 665 (782)
|+||++|.+
T Consensus 150 v~e~l~G~~ 158 (429)
T 1nw1_A 150 LEEYIPSRP 158 (429)
T ss_dssp EECCCCEEE
T ss_pred EEEEeCCcc
Confidence 999998633
No 441
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.61 E-value=0.0081 Score=63.14 Aligned_cols=135 Identities=11% Similarity=0.189 Sum_probs=77.9
Q ss_pred ceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcC---CCCcceEEeE------EEeCCeEEEEEEccCCC
Q 003982 594 FGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR---HRHLVALLGY------CINGSERLLVYEYMPRG 664 (782)
Q Consensus 594 ~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~nI~~~~~~------~~~~~~~~lv~e~~~~g 664 (782)
...||+....+| .+++|+...... ..|+++++.+. -|.+++++.. ....+..+++|+|++|.
T Consensus 36 ~N~vy~v~~~~g-~~vLK~~~~~~~--------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G~ 106 (339)
T 3i1a_A 36 NAFAYQADSESK-SYFIKLKYGYHD--------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHAP 106 (339)
T ss_dssp SCEEEEEECSSC-EEEEEEEECSSC--------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCCC
T ss_pred ccceEEEEeCCC-CEEEEEecCccc--------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCCC
Confidence 679999987667 899998765431 34556665553 2335555432 23356789999999986
Q ss_pred CHH-------------HHHHhhccCCCC----------CCC--HH-HHHHHH---------------------------H
Q 003982 665 TLA-------------QHLFEWHDHGYT----------PLT--WK-QRVTIA---------------------------L 691 (782)
Q Consensus 665 sL~-------------~~l~~~~~~~~~----------~l~--~~-~~~~i~---------------------------~ 691 (782)
.+. +.+.+.+..... .+. |. .+..+. .
T Consensus 107 ~~~~~~~~~~~~~~lg~~La~LH~~~~~~~~~~~~~~~~~~~~w~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 186 (339)
T 3i1a_A 107 NGFTQNLTGKQWKQLGKVLRQIHETSVPISIQQQLRKEIYSPKWREIVRSFYNQIEFDNSDDKLTAAFKSFFNQNSAAIH 186 (339)
T ss_dssp BTTTSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTSEECCCCCHHHHHHHHHGGGGSCCTTCCHHHHHHHHHHHHTHHHHH
T ss_pred cCcccCCCHHHHHHHHHHHHHHhCcCCCCCCccCccccccCcchHHHHHHHHHhhhccccCCcHHHHHHHHHHHhHHHHH
Confidence 551 223333322110 011 11 111111 1
Q ss_pred HHHHHHHH----Hhh-cCCCCeEEcCCCCCCEEECCCCcEEEEeeccceec
Q 003982 692 DVARGVEY----LHS-LAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNA 737 (782)
Q Consensus 692 qi~~aL~~----LH~-~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~ 737 (782)
.++..++. +.. .....++|+|+.+.||++++++.+.++||+.+...
T Consensus 187 ~~~~~~~~l~~~l~~~~~~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 187 RLVDTSEKLSKKIQPDLDKYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp HHHHHHHHHHHHCCCCGGGCEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred HHHHHHHHHHHHHhhCCCCceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 11222222 211 01358999999999999998888999999877543
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.45 E-value=0.013 Score=64.20 Aligned_cols=73 Identities=10% Similarity=0.098 Sum_probs=47.5
Q ss_pred cceeecccceEEEEEEeCC-CcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCc-ceEEeEEEeCCeEEEEEEccCC
Q 003982 586 ANILGRGGFGVVYGGELPD-GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHL-VALLGYCINGSERLLVYEYMPR 663 (782)
Q Consensus 586 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-~~~~~~~~~~~~~~lv~e~~~~ 663 (782)
.+.|+.|-...+|++...+ +..+++|+..... .. .-+..+|..+++.+...++ +++++++ .+ ..||||++|
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~--~~-~idR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v~e~I~G 185 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT--DE-IINREREKKISCILYNKNIAKKIYVFF--TN--GRIEEFMDG 185 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C--CS-CSCHHHHHHHHHHHTTSSSBCCEEEEE--TT--EEEEECCCS
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh--hh-hcCHHHHHHHHHHHHhcCCCCCEEEEe--CC--eEEEEeeCC
Confidence 4667888889999998754 4788999875432 11 1122688999998864444 5677665 22 259999987
Q ss_pred CC
Q 003982 664 GT 665 (782)
Q Consensus 664 gs 665 (782)
.+
T Consensus 186 ~~ 187 (458)
T 2qg7_A 186 YA 187 (458)
T ss_dssp EE
T ss_pred cc
Confidence 44
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.45 E-value=0.0041 Score=66.30 Aligned_cols=73 Identities=12% Similarity=0.103 Sum_probs=44.6
Q ss_pred cceeecccceEEEEEEeCC---------CcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCC-cceEEeEEEeCCeEE
Q 003982 586 ANILGRGGFGVVYGGELPD---------GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRH-LVALLGYCINGSERL 655 (782)
Q Consensus 586 ~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-I~~~~~~~~~~~~~~ 655 (782)
.+.++.|....+|+....+ ++.+++|+..... ....+...|.++++.+...+ ++++++.. . -+
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~---~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~ 110 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV---DELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GG 110 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG---GGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc---cceecHHHHHHHHHHHHhcCCCCceEEec--C--Cc
Confidence 4567778888999997643 2688899875432 11113467888888775333 45776543 2 26
Q ss_pred EEEEccCCCC
Q 003982 656 LVYEYMPRGT 665 (782)
Q Consensus 656 lv~e~~~~gs 665 (782)
+||||++|..
T Consensus 111 ~v~e~i~G~~ 120 (369)
T 3c5i_A 111 RIEEWLYGDP 120 (369)
T ss_dssp EEEECCCSEE
T ss_pred EEEEEecCCc
Confidence 8999998754
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.80 E-value=0.022 Score=60.76 Aligned_cols=147 Identities=16% Similarity=0.207 Sum_probs=84.7
Q ss_pred cceeecccceEEEEEEeCC--------CcEEEEEEeccccCC---------hhhH-------HHHHHHHHHHHhcC-CCC
Q 003982 586 ANILGRGGFGVVYGGELPD--------GTKIAVKRMESNTMG---------NKGL-------SEFQAEIAVLTKVR-HRH 640 (782)
Q Consensus 586 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~---------~~~~-------~~~~~E~~~l~~l~-h~n 640 (782)
.+.|..|-...+|++...+ ++.|.+++.-..... .-.+ +....|.++++.+. +--
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 4556667778999987653 367888887543210 0001 12335888888885 444
Q ss_pred cceEEeEEEeCCeEEEEEEccCCCCH--------------HHHHHhhccCCC---CCCC--HHHHHHHHHHHH-------
Q 003982 641 LVALLGYCINGSERLLVYEYMPRGTL--------------AQHLFEWHDHGY---TPLT--WKQRVTIALDVA------- 694 (782)
Q Consensus 641 I~~~~~~~~~~~~~~lv~e~~~~gsL--------------~~~l~~~~~~~~---~~l~--~~~~~~i~~qi~------- 694 (782)
.+++++++. +. +|+||++|-+| .+.+.+.+.... .... +..+.++..++.
T Consensus 137 ~Pkl~~~~~--~G--~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFP--QG--RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEET--TE--EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeC--CC--eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 667777653 22 89999987443 222333333211 1112 233444443321
Q ss_pred ---------------HHHHH----Hhh-cCCCCeEEcCCCCCCEEECCC------CcEEEEeecccee
Q 003982 695 ---------------RGVEY----LHS-LAQQSFIHRDLKPSNILIGDD------MRAKVADFGLVKN 736 (782)
Q Consensus 695 ---------------~aL~~----LH~-~~~~~ivHrDikp~NIll~~~------~~~kL~DfG~a~~ 736 (782)
.-+.. |.. .....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 11222 221 123579999999999999876 7899999987653
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.62 E-value=0.028 Score=60.68 Aligned_cols=143 Identities=12% Similarity=0.150 Sum_probs=85.2
Q ss_pred cceeecccceEEEEEEeCC--------CcEEEEEEeccccCChhhHHHHHHHHHHHHhcC-CCCcceEEeEEEeCCeEEE
Q 003982 586 ANILGRGGFGVVYGGELPD--------GTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVR-HRHLVALLGYCINGSERLL 656 (782)
Q Consensus 586 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nI~~~~~~~~~~~~~~l 656 (782)
.+.+..|-...+|+....+ ++.|++|+..... ...-+..+|.++++.+. +.-.+++++.+ . -++
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t---~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~ 147 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV---GKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGR 147 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC----CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc---chhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCE
Confidence 4567778888999997653 5789999875432 11123467888888875 33346666533 2 278
Q ss_pred EEEccCCCCHH--------------HHHHhhccC-----------CCCCCCHHHHHHHHHHH------------------
Q 003982 657 VYEYMPRGTLA--------------QHLFEWHDH-----------GYTPLTWKQRVTIALDV------------------ 693 (782)
Q Consensus 657 v~e~~~~gsL~--------------~~l~~~~~~-----------~~~~l~~~~~~~i~~qi------------------ 693 (782)
||||++|..+. +.+.+.+.. +..+.-+.++..+..++
T Consensus 148 I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 227 (424)
T 3mes_A 148 IEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSK 227 (424)
T ss_dssp EEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHH
T ss_pred EEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHH
Confidence 99999986531 112221110 11122244444443322
Q ss_pred -HHHHHHHhh---------------------cCCCCeEEcCCCCCCEEECCCCcEEEEeecccee
Q 003982 694 -ARGVEYLHS---------------------LAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKN 736 (782)
Q Consensus 694 -~~aL~~LH~---------------------~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~ 736 (782)
...+++|.+ .....++|+|+.+.||+ +.++.+.++||..|..
T Consensus 228 l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 228 ILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 122333321 11347899999999999 7788999999988753
No 446
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=90.60 E-value=0.18 Score=34.43 Aligned_cols=27 Identities=26% Similarity=0.363 Sum_probs=12.6
Q ss_pred eeehhHHHHHHHHHHHHHHHHHHHhhh
Q 003982 487 IVAIVVVVVIFIAVVFFVVYKFIARRK 513 (782)
Q Consensus 487 i~~~~~~~~~~~~~~~~~~~~~~~~~k 513 (782)
|.+.++++++++++++++++++.|||+
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRH 39 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhH
Confidence 444444444444444444444444443
No 447
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=89.69 E-value=0.19 Score=34.24 Aligned_cols=27 Identities=19% Similarity=0.288 Sum_probs=12.2
Q ss_pred eeehhHHHHHHHHHHHHHHHHHHHhhh
Q 003982 487 IVAIVVVVVIFIAVVFFVVYKFIARRK 513 (782)
Q Consensus 487 i~~~~~~~~~~~~~~~~~~~~~~~~~k 513 (782)
|.+.+++++++++++.+.++++.|||+
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr 38 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhh
Confidence 444444444444444444444444443
No 448
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=88.94 E-value=1.3 Score=47.28 Aligned_cols=30 Identities=27% Similarity=0.475 Sum_probs=25.0
Q ss_pred CeEEcCCCCCCEEE------CCCCcEEEEeecccee
Q 003982 707 SFIHRDLKPSNILI------GDDMRAKVADFGLVKN 736 (782)
Q Consensus 707 ~ivHrDikp~NIll------~~~~~~kL~DfG~a~~ 736 (782)
.++|+|+.+.||++ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46799999999999 4557799999988754
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=84.76 E-value=2.5 Score=40.46 Aligned_cols=83 Identities=11% Similarity=0.053 Sum_probs=62.0
Q ss_pred CCCCcceEEeEEEeCCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHH-HHhhcCCCCeEEcCCCC
Q 003982 637 RHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVE-YLHSLAQQSFIHRDLKP 715 (782)
Q Consensus 637 ~h~nI~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~-~LH~~~~~~ivHrDikp 715 (782)
.||++ -..+-.+++...+.++.-+++--...++. ++..++++++.+++.... ++++ -+|--++|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~--------~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK--------TTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT--------SCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh--------cCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeC
Confidence 58888 44455677777777776544443444432 788999999999988776 5553 57889999
Q ss_pred CCEEECCCCcEEEEeeccc
Q 003982 716 SNILIGDDMRAKVADFGLV 734 (782)
Q Consensus 716 ~NIll~~~~~~kL~DfG~a 734 (782)
+||+++.++.+++.-.|+-
T Consensus 113 ~NL~f~~~~~p~i~hRGi~ 131 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVK 131 (219)
T ss_dssp GGEEECTTCCEEESCCEET
T ss_pred ceEEEeCCCcEEEEEcCCc
Confidence 9999999999999877764
No 450
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=84.07 E-value=0.56 Score=31.85 Aligned_cols=26 Identities=31% Similarity=0.462 Sum_probs=10.0
Q ss_pred eeehhHHHHHHHHHHHHHHHHHHHhhh
Q 003982 487 IVAIVVVVVIFIAVVFFVVYKFIARRK 513 (782)
Q Consensus 487 i~~~~~~~~~~~~~~~~~~~~~~~~~k 513 (782)
+.+++++ +++++++.+++.++.|||+
T Consensus 14 Ia~~vVG-vll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 14 IISAVVG-ILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHH-HHHHHHHHHHHHhheehhh
Confidence 3344443 3333333333344444333
No 451
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=82.96 E-value=1.8 Score=41.32 Aligned_cols=93 Identities=17% Similarity=0.100 Sum_probs=57.3
Q ss_pred CCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccceecCCCCce
Q 003982 664 GTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVKNAPDGKYS 743 (782)
Q Consensus 664 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~~~~~~~~~ 743 (782)
.+|.+.|..+ ..++++++++.++.|.+.+|.-+-.. ..-..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~~----~~PlsEEqaWALc~Qc~~~L~~~~~~--~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~-------- 97 (229)
T 2yle_A 33 LSLEEILRLY----NQPINEEQAWAVCYQCCGSLRAAARR--RQPRHRVRSAAQIRVWRDGAVTLAP-AADD-------- 97 (229)
T ss_dssp EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCSGGGEEEETTSCEEECC-C-----------
T ss_pred ccHHHHHHHc----CCCcCHHHHHHHHHHHHHHHHhhhhc--ccCCceecCCcceEEecCCceeccc-cccc--------
Confidence 4788998775 35799999999999999998776210 1111334556889999999887753 1110
Q ss_pred eeecccccccccCccccccchhhhHHHHHHHHHhccc
Q 003982 744 VETRLAGTFGYLAPEYAGKHWMILCQMTGLIWLHGSV 780 (782)
Q Consensus 744 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~dvws~Gvv 780 (782)
.....+.|||... .++..+.-|||+|++
T Consensus 98 -----~~~~~~~~pe~~~----~~~te~~~IysLG~t 125 (229)
T 2yle_A 98 -----AGEPPPVAGKLGY----SQCMETEVIESLGII 125 (229)
T ss_dssp --------------CCSS----SSSCHHHHHHHHHHH
T ss_pred -----ccccCCCChhhcc----ccchHHHHHHHHHHH
Confidence 1123467888753 245667778888874
No 452
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=82.28 E-value=0.16 Score=55.60 Aligned_cols=63 Identities=5% Similarity=0.067 Sum_probs=18.1
Q ss_pred ccceeecccceEEEEEEeCC-CcEEEE------EEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeEEEe
Q 003982 585 EANILGRGGFGVVYGGELPD-GTKIAV------KRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGYCIN 650 (782)
Q Consensus 585 ~~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~ 650 (782)
+.+.+| ||.||+|.+.. ..+||| |..+......+....+.+|..+++..+|||+++.+++...
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 456666 99999997643 367888 7766555445556678899999999999999999887543
No 453
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=79.59 E-value=2.4 Score=40.36 Aligned_cols=85 Identities=12% Similarity=0.065 Sum_probs=61.6
Q ss_pred CCCCcceEEeEEEeCCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeEEcCCCCC
Q 003982 637 RHRHLVALLGYCINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPS 716 (782)
Q Consensus 637 ~h~nI~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivHrDikp~ 716 (782)
.||+++.. .+-.+.+...+.++.-+.+-=...++ ..+..++++++.+++...+++++ =+|--++|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik--------~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~ 108 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK--------SFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPD 108 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG--------GSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH--------hcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecc
Confidence 58888876 45566666666666544222222232 37889999999999998866664 378899999
Q ss_pred CEEECCCCcEEEEeeccce
Q 003982 717 NILIGDDMRAKVADFGLVK 735 (782)
Q Consensus 717 NIll~~~~~~kL~DfG~a~ 735 (782)
||+++.++.+++.=.|+-.
T Consensus 109 NL~f~~~~~p~i~~RGik~ 127 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQN 127 (215)
T ss_dssp GEEECTTSCEEESCCEETT
T ss_pred eEEEcCCCCEEEEEccCcc
Confidence 9999999999998777643
No 454
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=78.40 E-value=0.93 Score=29.88 Aligned_cols=24 Identities=21% Similarity=0.342 Sum_probs=10.5
Q ss_pred eeeeeeehhHHHHHHHHHHHHHHH
Q 003982 483 SVGTIVAIVVVVVIFIAVVFFVVY 506 (782)
Q Consensus 483 ~~~~i~~~~~~~~~~~~~~~~~~~ 506 (782)
+.+.+.++++.+++.++++..+.+
T Consensus 9 s~GaIAGiVvG~v~gv~li~~l~~ 32 (38)
T 2k1k_A 9 TGGEIVAVIFGLLLGAALLLGILV 32 (38)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceeeeehHHHHHHHHHHHHHH
Confidence 344455555544443443333333
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=56.06 E-value=26 Score=28.61 Aligned_cols=36 Identities=31% Similarity=0.425 Sum_probs=15.7
Q ss_pred CCCCCCCCCEEeCCCCcccCCCCCCCCCCCCCCEEec
Q 003982 108 SLANATSLQDIYLDNNNFTSVPTGCFDGLTNLQVLSL 144 (782)
Q Consensus 108 ~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 144 (782)
.|.++.+|+.+.|-.+ ++.|...+|.++.+|+.+.+
T Consensus 15 aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~ 50 (100)
T 2lz0_A 15 LFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLIL 50 (100)
T ss_dssp TTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEE
T ss_pred HhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEE
Confidence 3444444444444332 34444444444444444444
No 456
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=54.78 E-value=1e+02 Score=34.30 Aligned_cols=46 Identities=20% Similarity=0.193 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHH--HHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccce
Q 003982 683 WKQRVTIALDVAR--GVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (782)
Q Consensus 683 ~~~~~~i~~qi~~--aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~ 735 (782)
+..+..+++.+|- .+.|+= || +|=+++|||++.+|++.=+|||.+-
T Consensus 454 ~~a~~nF~~S~A~ySvv~YIL-----Gi--gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYIL-----GV--GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----TC--CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheee-----ec--cCCCCcceeEcCCCCEeeeehHHhh
Confidence 4556666666553 455664 45 6889999999999999999999874
No 457
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=53.48 E-value=18 Score=29.59 Aligned_cols=50 Identities=14% Similarity=0.229 Sum_probs=38.2
Q ss_pred CCcccCCCCCCCCCCCCCCEEeccCCCCCCCCCCCcccCCCcccCeeeccccc
Q 003982 122 NNNFTSVPTGCFDGLTNLQVLSLSDNPNLAPWPFPNELTKSTSLTTLYMDNAN 174 (782)
Q Consensus 122 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~p~~~~~l~~L~~L~L~~N~ 174 (782)
+..++.|...+|.++.+|+.+.+-.+ ++. +-..+|.++.+|+.+.+....
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v~~--Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-IGL--LYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-SSC--CCTTSSTTCTTCCCEEECCSC
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-hhe--EcHHHHhccCCccEEEEcCCC
Confidence 34677888888999999999999765 333 345688889999999887643
No 458
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=47.39 E-value=80 Score=35.71 Aligned_cols=45 Identities=22% Similarity=0.239 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHH--HHHHHhhcCCCCeEEcCCCCCCEEECCCCcEEEEeeccce
Q 003982 684 KQRVTIALDVAR--GVEYLHSLAQQSFIHRDLKPSNILIGDDMRAKVADFGLVK 735 (782)
Q Consensus 684 ~~~~~i~~qi~~--aL~~LH~~~~~~ivHrDikp~NIll~~~~~~kL~DfG~a~ 735 (782)
..+..+++++|- .+.|+= || +|=+++|||++.+|.+.=+|||.+-
T Consensus 529 ~ar~nF~~SlA~~Svv~YIL-----Gl--GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLL-----GV--GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----TC--CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHc-----cC--CCCCCcceEEeCCCCEEEEeehhhh
Confidence 445566666543 355553 44 7999999999999999999999874
No 459
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=46.07 E-value=21 Score=25.39 Aligned_cols=26 Identities=8% Similarity=0.273 Sum_probs=13.2
Q ss_pred eeeeeeehhHHHHHHHHHHHHHHHHH
Q 003982 483 SVGTIVAIVVVVVIFIAVVFFVVYKF 508 (782)
Q Consensus 483 ~~~~i~~~~~~~~~~~~~~~~~~~~~ 508 (782)
.+++|++.++++.++++++.++.|++
T Consensus 11 p~wiIi~svl~GLllL~li~~~LwK~ 36 (54)
T 2knc_A 11 PIWWVLVGVLGGLLLLTILVLAMWKV 36 (54)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34555555555555555555454443
No 460
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=42.39 E-value=15 Score=26.08 Aligned_cols=25 Identities=8% Similarity=0.309 Sum_probs=12.5
Q ss_pred eeeeeehhHHHHHHHHHHHHHHHHH
Q 003982 484 VGTIVAIVVVVVIFIAVVFFVVYKF 508 (782)
Q Consensus 484 ~~~i~~~~~~~~~~~~~~~~~~~~~ 508 (782)
+++|++.++++.++++++.++.|++
T Consensus 9 ~WiIi~svl~GLLLL~Lii~~LwK~ 33 (54)
T 2l8s_A 9 LWVILLSAFAGLLLLMLLILALWKI 33 (54)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4455555555555555555454443
No 461
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=38.33 E-value=36 Score=23.04 Aligned_cols=8 Identities=25% Similarity=0.007 Sum_probs=2.9
Q ss_pred HHhhhccc
Q 003982 509 IARRKHRK 516 (782)
Q Consensus 509 ~~~~k~~~ 516 (782)
....|||+
T Consensus 32 ~~~~RRR~ 39 (44)
T 2jwa_A 32 GILIKRRQ 39 (44)
T ss_dssp HHHHHHHC
T ss_pred Hhheehhh
Confidence 33333333
No 462
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=37.24 E-value=26 Score=25.90 Aligned_cols=26 Identities=12% Similarity=0.132 Sum_probs=12.3
Q ss_pred ehhHHHHHHHHHHHHHHHHHHHhhhc
Q 003982 489 AIVVVVVIFIAVVFFVVYKFIARRKH 514 (782)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~k~ 514 (782)
+.++.++++++.+++++...+++++.
T Consensus 21 GLifA~vLfi~GI~iilS~kcrCk~~ 46 (67)
T 2jp3_A 21 GLIFGGLLCIAGIALALSGKCKCRRN 46 (67)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHT
T ss_pred chhhHHHHHHHHHHHHHcCcccccCC
Confidence 33444455555555555444444443
No 463
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=34.06 E-value=19 Score=28.08 Aligned_cols=21 Identities=10% Similarity=0.425 Sum_probs=9.2
Q ss_pred eeeehhHHHHHHHHHHHHHHH
Q 003982 486 TIVAIVVVVVIFIAVVFFVVY 506 (782)
Q Consensus 486 ~i~~~~~~~~~~~~~~~~~~~ 506 (782)
.+++.++++++++++++++++
T Consensus 12 ~Iv~gvi~gilliGllllliw 32 (79)
T 2knc_B 12 VVLLSVMGAILLIGLAALLIW 32 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444
No 464
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=33.50 E-value=21 Score=24.30 Aligned_cols=14 Identities=0% Similarity=-0.221 Sum_probs=5.4
Q ss_pred HHHHHHHHHHHhhh
Q 003982 500 VVFFVVYKFIARRK 513 (782)
Q Consensus 500 ~~~~~~~~~~~~~k 513 (782)
+++++++..++.++
T Consensus 29 ~~~~~~~RRr~~~~ 42 (44)
T 2ks1_B 29 LGIGLFMRRRHIVR 42 (44)
T ss_dssp HHHHHHHHTTTCCS
T ss_pred HHHHHHhhhhHhhc
Confidence 33333343443333
No 465
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=39.19 E-value=9.1 Score=24.93 Aligned_cols=15 Identities=13% Similarity=0.406 Sum_probs=6.2
Q ss_pred HHHHHHHHHHhhhcc
Q 003982 501 VFFVVYKFIARRKHR 515 (782)
Q Consensus 501 ~~~~~~~~~~~~k~~ 515 (782)
+.+++..+.+++|.|
T Consensus 23 isLIiLi~~w~qKPr 37 (39)
T 2l6w_A 23 ISLIILIMLWQKKPR 37 (39)
Confidence 333334444444433
No 466
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=31.01 E-value=54 Score=24.47 Aligned_cols=26 Identities=15% Similarity=0.329 Sum_probs=12.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcc
Q 003982 490 IVVVVVIFIAVVFFVVYKFIARRKHR 515 (782)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~k~~ 515 (782)
.++.++++++.+++++...++++..+
T Consensus 21 LifA~vLfi~GI~iilS~KckCk~~q 46 (72)
T 2jo1_A 21 LVIAGILFILGILIVLSRRCRCKFNQ 46 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHHHHHcCccccCCCC
Confidence 34444555555555555444444433
No 467
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=30.53 E-value=24 Score=23.80 Aligned_cols=23 Identities=13% Similarity=0.504 Sum_probs=10.7
Q ss_pred eeehhHHHHHHHHHHHHHHHHHH
Q 003982 487 IVAIVVVVVIFIAVVFFVVYKFI 509 (782)
Q Consensus 487 i~~~~~~~~~~~~~~~~~~~~~~ 509 (782)
+++.++++++++.+++++++++.
T Consensus 12 Iv~gvi~~ivliGl~lLliwk~~ 34 (43)
T 2k9j_B 12 VLLSVMGAILLIGLAALLIWKLL 34 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444455555444444433
No 468
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=27.62 E-value=25 Score=23.63 Aligned_cols=23 Identities=4% Similarity=0.255 Sum_probs=10.6
Q ss_pred eeeeeehhHHHHHHHHHHHHHHH
Q 003982 484 VGTIVAIVVVVVIFIAVVFFVVY 506 (782)
Q Consensus 484 ~~~i~~~~~~~~~~~~~~~~~~~ 506 (782)
+++++..++++.++++++.++.+
T Consensus 10 ~wiIi~s~l~GLllL~li~~~Lw 32 (42)
T 2k1a_A 10 IWWVLVGVLGGLLLLTILVLAMW 32 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444444
No 469
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=20.94 E-value=28 Score=26.27 Aligned_cols=25 Identities=8% Similarity=0.162 Sum_probs=9.6
Q ss_pred ehhHHHHHHHHHHHHHHHHHHHhhh
Q 003982 489 AIVVVVVIFIAVVFFVVYKFIARRK 513 (782)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~k 513 (782)
+.++.++++++.+++++...+++++
T Consensus 23 GLifA~vLfi~GI~iilS~kcrCk~ 47 (74)
T 2zxe_G 23 GLIVAAVLCVIGIIILLAGKCRCKF 47 (74)
T ss_dssp HHHHHHHHHHHHHHHHTTTC-----
T ss_pred cchhHHHHHHHHHHHHHcCccccCC
Confidence 3344445555555555544444443
No 470
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=20.81 E-value=1.1e+02 Score=19.14 Aligned_cols=11 Identities=27% Similarity=0.413 Sum_probs=3.9
Q ss_pred HHHHHHHHHHH
Q 003982 496 IFIAVVFFVVY 506 (782)
Q Consensus 496 ~~~~~~~~~~~ 506 (782)
+++.+.-.+.|
T Consensus 19 if~~lg~tfly 29 (40)
T 2l9u_A 19 IFMMLGGTFLY 29 (40)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHhCceeEE
Confidence 33333333333
No 471
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=20.02 E-value=1.1e+02 Score=31.13 Aligned_cols=139 Identities=12% Similarity=0.074 Sum_probs=67.5
Q ss_pred cceeecccceEEEEEEeCCCcEEEEEEeccccCChhhHHHHHHHHHHHHhcCCCCcceEEeE------------------
Q 003982 586 ANILGRGGFGVVYGGELPDGTKIAVKRMESNTMGNKGLSEFQAEIAVLTKVRHRHLVALLGY------------------ 647 (782)
Q Consensus 586 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~------------------ 647 (782)
++..-.|. +.||.+.. ++..|+||-.. ....+.+-.++...=.+.-|+..-+.-.
T Consensus 74 I~~s~~Gs-tgvff~~t-d~~~~VVK~s~-----~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~ 146 (342)
T 1cja_A 74 IERSEKGT-EGLFFVET-ESGVFIVKRST-----NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSF 146 (342)
T ss_dssp EEECCSTT-SCEEEEEE-SSCEEEEECCT-----THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSS
T ss_pred EEeccCCC-CCeEEEEe-CCCEEEEeCcH-----HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhh
Confidence 34444554 55565554 68889999441 1223334444443334444443222110
Q ss_pred ----EEeCCeEEEEEEccCCCCHHHHHHhhccCCCCCCCHHHHHHHHHHH--HHHHHHHhh-cCCCCeE-EcCCCCCCEE
Q 003982 648 ----CINGSERLLVYEYMPRGTLAQHLFEWHDHGYTPLTWKQRVTIALDV--ARGVEYLHS-LAQQSFI-HRDLKPSNIL 719 (782)
Q Consensus 648 ----~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi--~~aL~~LH~-~~~~~iv-HrDikp~NIl 719 (782)
.......+++|||.+|..|.+.-..... ..+..+ .+.++ +-+++.+.. ..+...+ +.--.+.|||
T Consensus 147 ~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~---~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL 219 (342)
T 1cja_A 147 RVITTLANQANILLMELVRGITLNKLTTTSAP---EVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIM 219 (342)
T ss_dssp CHHHHHTTCSEEEEEECCCEEESTTCCSSSHH---HHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEE
T ss_pred HHHHHhhcccceehhhhcCCCccccchhhhhh---hhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheE
Confidence 0012246799999987655432110000 001222 23332 223444443 2222211 1125788999
Q ss_pred ECCCC-cEEEEeeccceecC
Q 003982 720 IGDDM-RAKVADFGLVKNAP 738 (782)
Q Consensus 720 l~~~~-~~kL~DfG~a~~~~ 738 (782)
+++++ .+.++|-+.+..-.
T Consensus 220 ~~~~n~~~~~IDhn~af~~~ 239 (342)
T 1cja_A 220 LSERGATVVPIDSKIIPLDA 239 (342)
T ss_dssp EESBTTCEEECSCCCCCCCS
T ss_pred EeCCCCeEEEEcCCccccCC
Confidence 97755 48999999986543
Done!