Query 003985
Match_columns 781
No_of_seqs 388 out of 3226
Neff 6.9
Searched_HMMs 46136
Date Thu Mar 28 15:30:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003985.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003985hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00142 sucrose synthase 100.0 5E-188 1E-192 1634.7 67.6 767 1-769 2-768 (815)
2 TIGR02470 sucr_synth sucrose s 100.0 3E-181 6E-186 1578.2 69.9 744 24-769 1-745 (784)
3 PF00862 Sucrose_synth: Sucros 100.0 5E-175 1E-179 1418.7 29.7 550 7-556 1-550 (550)
4 TIGR02468 sucrsPsyn_pln sucros 100.0 1.2E-57 2.6E-62 544.1 39.7 455 278-772 169-671 (1050)
5 KOG0853 Glycosyltransferase [C 100.0 1.6E-55 3.4E-60 489.0 23.6 452 195-758 1-456 (495)
6 TIGR02472 sucr_P_syn_N sucrose 100.0 4.8E-51 1E-55 463.9 40.3 423 279-769 1-438 (439)
7 TIGR03449 mycothiol_MshA UDP-N 100.0 2.7E-42 5.9E-47 386.4 37.9 399 281-771 1-401 (405)
8 PRK00654 glgA glycogen synthas 100.0 1.8E-42 4E-47 396.5 34.8 425 279-770 1-461 (466)
9 cd03800 GT1_Sucrose_synthase T 100.0 7.7E-41 1.7E-45 370.6 40.5 392 280-759 1-392 (398)
10 TIGR02095 glgA glycogen/starch 100.0 9E-41 1.9E-45 383.2 36.9 434 279-771 1-472 (473)
11 PRK10307 putative glycosyl tra 100.0 1.4E-40 3E-45 374.3 36.4 395 279-771 1-407 (412)
12 PLN02939 transferase, transfer 100.0 8E-40 1.7E-44 386.1 40.9 457 257-769 456-968 (977)
13 cd03796 GT1_PIG-A_like This fa 100.0 1.8E-40 4E-45 372.0 33.8 366 280-770 1-370 (398)
14 PLN02316 synthase/transferase 100.0 1.8E-39 3.9E-44 389.6 41.1 405 278-771 587-1033(1036)
15 PRK14098 glycogen synthase; Pr 100.0 3.1E-39 6.8E-44 371.0 35.5 439 276-772 4-486 (489)
16 TIGR02149 glgA_Coryne glycogen 100.0 8.5E-39 1.8E-43 355.0 35.6 376 279-769 1-384 (388)
17 PLN02871 UDP-sulfoquinovose:DA 100.0 7.8E-39 1.7E-43 366.4 35.1 376 277-772 57-439 (465)
18 cd03791 GT1_Glycogen_synthase_ 100.0 1.3E-38 2.8E-43 365.0 36.3 433 280-769 1-474 (476)
19 cd04962 GT1_like_5 This family 100.0 3.9E-38 8.4E-43 346.5 38.1 365 279-770 1-369 (371)
20 PRK15427 colanic acid biosynth 100.0 2.4E-38 5.2E-43 356.4 37.2 280 405-770 116-404 (406)
21 PRK14099 glycogen synthase; Pr 100.0 4.5E-38 9.8E-43 361.1 37.3 429 278-769 3-480 (485)
22 PRK15484 lipopolysaccharide 1, 100.0 4E-37 8.6E-42 343.6 36.3 375 277-772 1-378 (380)
23 cd03805 GT1_ALG2_like This fam 100.0 3.6E-37 7.8E-42 342.4 35.7 382 279-759 1-388 (392)
24 cd03818 GT1_ExpC_like This fam 100.0 1.8E-36 3.9E-41 339.4 37.5 360 318-759 15-390 (396)
25 TIGR03088 stp2 sugar transfera 100.0 1.3E-36 2.7E-41 336.8 34.3 364 280-770 3-371 (374)
26 PRK15490 Vi polysaccharide bio 100.0 2.8E-36 6.1E-41 341.5 34.1 398 299-771 171-575 (578)
27 cd03819 GT1_WavL_like This fam 100.0 4.6E-36 9.9E-41 327.3 33.4 347 300-759 8-355 (355)
28 PRK15179 Vi polysaccharide bio 100.0 6.3E-36 1.4E-40 352.3 36.3 457 203-769 204-691 (694)
29 cd05844 GT1_like_7 Glycosyltra 100.0 5.7E-36 1.2E-40 328.8 33.3 274 406-759 81-360 (367)
30 cd04955 GT1_like_6 This family 100.0 2.5E-35 5.3E-40 322.2 37.0 360 280-769 1-362 (363)
31 KOG1111 N-acetylglucosaminyltr 100.0 1.1E-36 2.4E-41 319.7 22.0 365 279-772 1-367 (426)
32 cd03792 GT1_Trehalose_phosphor 100.0 2.6E-35 5.6E-40 327.0 31.6 286 405-770 83-370 (372)
33 cd03821 GT1_Bme6_like This fam 100.0 2.3E-34 4.9E-39 311.3 36.2 366 280-759 1-369 (375)
34 cd03795 GT1_like_4 This family 100.0 6.6E-34 1.4E-38 309.8 36.6 353 280-759 1-356 (357)
35 cd03799 GT1_amsK_like This is 100.0 9.6E-34 2.1E-38 308.3 36.8 268 405-759 77-351 (355)
36 cd03812 GT1_CapH_like This fam 100.0 3.2E-34 6.9E-39 313.2 31.8 349 280-754 1-350 (358)
37 cd03794 GT1_wbuB_like This fam 100.0 2.1E-33 4.6E-38 304.7 36.8 382 280-759 1-389 (394)
38 cd03817 GT1_UGDG_like This fam 100.0 4.1E-33 8.8E-38 301.9 36.7 360 280-754 1-362 (374)
39 cd03802 GT1_AviGT4_like This f 100.0 3.4E-33 7.4E-38 302.3 35.4 332 279-769 1-334 (335)
40 cd03814 GT1_like_2 This family 100.0 3.2E-33 7E-38 303.0 34.8 362 280-769 1-363 (364)
41 cd03801 GT1_YqgM_like This fam 100.0 8.5E-33 1.8E-37 296.1 36.8 373 280-769 1-373 (374)
42 cd03816 GT1_ALG1_like This fam 100.0 2.7E-33 5.9E-38 316.3 34.6 386 277-758 2-405 (415)
43 cd04951 GT1_WbdM_like This fam 100.0 6.4E-33 1.4E-37 302.4 35.7 358 280-770 1-359 (360)
44 PRK09922 UDP-D-galactose:(gluc 100.0 8.5E-34 1.8E-38 313.8 29.1 347 279-768 1-356 (359)
45 cd03822 GT1_ecORF704_like This 100.0 1.1E-32 2.4E-37 299.5 37.0 357 280-769 1-365 (366)
46 cd03813 GT1_like_3 This family 100.0 3.9E-34 8.6E-39 328.5 26.6 291 406-769 172-474 (475)
47 cd03807 GT1_WbnK_like This fam 100.0 4.6E-33 1E-37 299.9 31.5 362 280-769 1-364 (365)
48 PLN02846 digalactosyldiacylgly 100.0 9.1E-33 2E-37 311.7 33.3 369 278-770 4-390 (462)
49 cd03820 GT1_amsD_like This fam 100.0 4.1E-32 8.9E-37 290.0 34.1 345 280-766 1-347 (348)
50 cd03825 GT1_wcfI_like This fam 100.0 1.6E-32 3.4E-37 299.8 31.5 342 279-770 1-363 (365)
51 cd03806 GT1_ALG11_like This fa 100.0 1.6E-32 3.6E-37 310.3 32.3 372 281-759 3-416 (419)
52 PLN02949 transferase, transfer 100.0 3.1E-32 6.8E-37 310.5 32.6 236 468-770 214-459 (463)
53 cd03811 GT1_WabH_like This fam 100.0 8.6E-32 1.9E-36 287.6 33.4 351 280-755 1-352 (353)
54 cd03823 GT1_ExpE7_like This fa 100.0 9.2E-32 2E-36 290.6 33.5 353 280-770 1-358 (359)
55 cd03808 GT1_cap1E_like This fa 100.0 1.4E-31 3E-36 287.2 34.2 351 280-759 1-353 (359)
56 cd03809 GT1_mtfB_like This fam 100.0 3.2E-32 7E-37 295.7 29.2 359 280-759 1-359 (365)
57 cd03798 GT1_wlbH_like This fam 100.0 4.3E-31 9.3E-36 284.3 36.3 362 301-770 13-375 (377)
58 PRK10125 putative glycosyl tra 100.0 7.8E-32 1.7E-36 303.3 30.2 278 405-771 92-404 (405)
59 TIGR03087 stp1 sugar transfera 100.0 3.5E-32 7.5E-37 305.0 26.3 284 405-769 102-394 (397)
60 TIGR02918 accessory Sec system 100.0 2.1E-31 4.6E-36 306.4 29.3 280 405-771 209-499 (500)
61 cd04946 GT1_AmsK_like This fam 100.0 1.8E-30 4E-35 292.5 30.0 271 405-759 125-401 (407)
62 PLN02275 transferase, transfer 100.0 9.9E-30 2.2E-34 283.1 31.2 318 318-728 23-370 (371)
63 cd03804 GT1_wbaZ_like This fam 100.0 1.8E-29 4E-34 277.1 24.0 260 405-759 81-346 (351)
64 cd04949 GT1_gtfA_like This fam 100.0 8.9E-29 1.9E-33 273.6 29.2 269 406-759 98-368 (372)
65 PLN02501 digalactosyldiacylgly 100.0 1.1E-27 2.3E-32 274.0 32.9 270 395-759 425-699 (794)
66 COG0297 GlgA Glycogen synthase 100.0 1.8E-27 4E-32 269.0 29.2 435 279-770 1-476 (487)
67 PHA01630 putative group 1 glyc 100.0 1.1E-27 2.5E-32 262.4 25.0 256 413-770 52-329 (331)
68 cd03793 GT1_Glycogen_synthase_ 100.0 2.4E-26 5.3E-31 260.9 29.2 319 405-759 146-576 (590)
69 PRK00726 murG undecaprenyldiph 99.9 2.3E-25 4.9E-30 246.0 30.4 343 278-769 1-355 (357)
70 cd03788 GT1_TPS Trehalose-6-Ph 99.9 3.1E-25 6.8E-30 253.6 24.9 315 396-758 121-450 (460)
71 cd03785 GT1_MurG MurG is an N- 99.9 3.1E-24 6.7E-29 235.4 31.4 313 301-750 9-339 (350)
72 PHA01633 putative glycosyl tra 99.9 1.1E-24 2.3E-29 237.6 26.0 224 471-766 89-334 (335)
73 TIGR01133 murG undecaprenyldip 99.9 3.3E-24 7.1E-29 235.0 29.5 305 318-750 19-336 (348)
74 TIGR02400 trehalose_OtsA alpha 99.9 5E-24 1.1E-28 242.7 27.3 319 395-767 116-452 (456)
75 PRK05749 3-deoxy-D-manno-octul 99.9 2.5E-23 5.5E-28 235.5 27.7 272 407-753 124-406 (425)
76 PF00534 Glycos_transf_1: Glyc 99.9 2.1E-23 4.5E-28 205.8 14.9 160 569-749 12-172 (172)
77 PLN03063 alpha,alpha-trehalose 99.9 6.2E-22 1.3E-26 238.6 25.2 321 395-769 136-475 (797)
78 PRK13609 diacylglycerol glucos 99.9 2.2E-21 4.8E-26 216.3 24.9 261 406-769 103-369 (380)
79 cd04950 GT1_like_1 Glycosyltra 99.9 3E-20 6.4E-25 207.2 31.1 264 405-768 100-368 (373)
80 cd01635 Glycosyltransferase_GT 99.9 2.2E-20 4.9E-25 188.9 25.3 121 577-713 109-229 (229)
81 PRK14501 putative bifunctional 99.9 9.2E-21 2E-25 228.2 25.0 321 395-771 122-462 (726)
82 PLN02605 monogalactosyldiacylg 99.9 5.5E-20 1.2E-24 205.7 25.6 247 406-750 99-363 (382)
83 PRK13608 diacylglycerol glucos 99.8 7E-19 1.5E-23 197.5 23.7 268 406-776 103-376 (391)
84 COG0438 RfaG Glycosyltransfera 99.8 2.5E-18 5.4E-23 181.4 26.4 289 408-770 84-375 (381)
85 TIGR02398 gluc_glyc_Psyn gluco 99.8 1.1E-17 2.4E-22 190.5 28.8 304 407-756 132-469 (487)
86 TIGR02094 more_P_ylases alpha- 99.8 2.3E-17 5E-22 192.8 27.0 349 392-768 147-597 (601)
87 PRK09814 beta-1,6-galactofuran 99.8 2.9E-17 6.3E-22 180.5 25.0 234 407-750 63-313 (333)
88 PRK00025 lpxB lipid-A-disaccha 99.8 3.3E-17 7.1E-22 182.4 24.7 249 406-750 84-356 (380)
89 TIGR00236 wecB UDP-N-acetylglu 99.8 7.5E-17 1.6E-21 179.1 24.0 265 394-746 76-345 (365)
90 cd03786 GT1_UDP-GlcNAc_2-Epime 99.8 1.1E-16 2.4E-21 176.7 24.5 250 406-742 87-344 (363)
91 KOG1387 Glycosyltransferase [C 99.7 1.4E-15 3.1E-20 160.0 28.4 276 403-757 146-446 (465)
92 PLN03064 alpha,alpha-trehalose 99.7 7.3E-16 1.6E-20 185.8 25.0 319 396-769 221-559 (934)
93 TIGR03713 acc_sec_asp1 accesso 99.7 8.2E-15 1.8E-19 169.4 24.7 170 572-769 319-519 (519)
94 cd04299 GT1_Glycogen_Phosphory 99.6 5.1E-14 1.1E-18 167.8 28.2 332 404-759 245-679 (778)
95 PF13692 Glyco_trans_1_4: Glyc 99.6 2.8E-15 6E-20 141.9 9.5 130 572-729 2-133 (135)
96 TIGR00215 lpxB lipid-A-disacch 99.6 8.8E-13 1.9E-17 148.0 26.5 249 406-748 88-364 (385)
97 PF05693 Glycogen_syn: Glycoge 99.5 3.2E-13 6.8E-18 153.6 22.0 318 407-759 143-571 (633)
98 KOG2941 Beta-1,4-mannosyltrans 99.5 2.6E-12 5.7E-17 135.8 26.2 371 320-759 33-431 (444)
99 PF00982 Glyco_transf_20: Glyc 99.3 1.6E-10 3.5E-15 132.3 24.3 308 396-755 131-460 (474)
100 PRK10117 trehalose-6-phosphate 99.3 2.6E-10 5.6E-15 129.4 25.6 322 396-770 113-452 (474)
101 PF13524 Glyco_trans_1_2: Glyc 99.3 2.7E-11 5.9E-16 107.7 9.8 86 668-759 1-86 (92)
102 PF13439 Glyco_transf_4: Glyco 99.3 3.2E-11 7E-16 117.5 11.0 165 299-533 9-176 (177)
103 PF13579 Glyco_trans_4_4: Glyc 99.2 1.6E-11 3.4E-16 117.7 8.0 160 302-527 1-160 (160)
104 PRK12446 undecaprenyldiphospho 99.2 8.3E-09 1.8E-13 114.6 30.5 301 301-740 11-330 (352)
105 COG0707 MurG UDP-N-acetylgluco 99.2 1.7E-08 3.7E-13 111.8 31.8 311 301-750 10-339 (357)
106 PLN02205 alpha,alpha-trehalose 99.2 2.1E-09 4.5E-14 130.8 26.3 312 394-751 188-534 (854)
107 COG0380 OtsA Trehalose-6-phosp 99.2 7.2E-09 1.6E-13 117.3 25.8 307 396-751 137-462 (486)
108 TIGR02919 accessory Sec system 99.1 2.3E-08 4.9E-13 113.7 24.7 135 588-750 291-426 (438)
109 PF09314 DUF1972: Domain of un 99.0 1.2E-08 2.6E-13 102.4 16.0 177 278-529 1-185 (185)
110 cd03784 GT1_Gtf_like This fami 98.9 9.6E-08 2.1E-12 107.4 23.4 123 570-729 238-370 (401)
111 PF08323 Glyco_transf_5: Starc 98.8 1.1E-08 2.5E-13 107.9 10.2 183 280-489 1-230 (245)
112 PF13528 Glyco_trans_1_3: Glyc 98.8 4.2E-07 9E-12 98.9 21.4 116 570-726 191-315 (318)
113 TIGR01426 MGT glycosyltransfer 98.8 3.4E-06 7.3E-11 94.8 27.5 91 639-745 273-369 (392)
114 TIGR03492 conserved hypothetic 98.7 3.7E-06 8E-11 95.0 25.0 150 571-749 204-378 (396)
115 TIGR03568 NeuC_NnaA UDP-N-acet 98.7 5.3E-06 1.1E-10 92.8 25.6 246 394-728 83-336 (365)
116 PF13477 Glyco_trans_4_2: Glyc 98.6 6.1E-07 1.3E-11 85.3 14.0 123 318-482 15-139 (139)
117 COG1519 KdtA 3-deoxy-D-manno-o 98.6 3.3E-05 7.1E-10 85.7 27.2 263 407-752 123-403 (419)
118 TIGR00661 MJ1255 conserved hyp 98.5 1.7E-05 3.6E-10 87.0 22.9 75 640-725 228-308 (321)
119 PF02350 Epimerase_2: UDP-N-ac 98.3 7.7E-05 1.7E-09 82.9 21.1 260 395-742 58-325 (346)
120 TIGR03590 PseG pseudaminic aci 98.3 9.5E-05 2.1E-09 79.7 21.1 97 572-697 171-268 (279)
121 PF13844 Glyco_transf_41: Glyc 98.2 2.1E-05 4.6E-10 89.5 15.9 186 558-770 273-465 (468)
122 PHA03392 egt ecdysteroid UDP-g 98.2 0.00098 2.1E-08 77.8 28.1 138 572-748 297-445 (507)
123 PF02684 LpxB: Lipid-A-disacch 98.1 0.00036 7.9E-09 77.9 21.6 241 405-741 80-346 (373)
124 PF04007 DUF354: Protein of un 97.9 0.0016 3.5E-08 71.9 22.9 62 659-728 243-307 (335)
125 KOG3742 Glycogen synthase [Car 97.8 8.3E-05 1.8E-09 81.7 10.1 94 660-759 496-602 (692)
126 PLN02448 UDP-glycosyltransfera 97.8 0.021 4.6E-07 65.9 29.4 139 571-748 274-429 (459)
127 COG1819 Glycosyl transferases, 97.7 0.0014 2.9E-08 74.5 17.6 135 571-745 237-378 (406)
128 PRK01021 lpxB lipid-A-disaccha 97.6 0.0074 1.6E-07 70.8 21.4 250 405-754 308-589 (608)
129 COG0763 LpxB Lipid A disacchar 97.5 0.0025 5.4E-08 70.3 15.3 200 405-696 83-290 (381)
130 COG3914 Spy Predicted O-linked 97.3 0.0035 7.6E-08 71.9 14.8 183 562-771 422-613 (620)
131 PF12000 Glyco_trans_4_3: Gkyc 97.2 0.0044 9.5E-08 61.8 12.2 110 396-533 56-170 (171)
132 PRK10017 colanic acid biosynth 97.2 0.11 2.4E-06 59.4 25.3 97 631-742 297-399 (426)
133 cd04300 GT1_Glycogen_Phosphory 97.1 0.011 2.4E-07 71.5 16.6 150 563-722 521-688 (797)
134 PLN02208 glycosyltransferase f 97.1 0.58 1.3E-05 53.9 30.0 66 679-748 339-415 (442)
135 PLN03007 UDP-glucosyltransfera 97.0 0.59 1.3E-05 54.5 29.8 78 640-729 344-438 (482)
136 COG4641 Uncharacterized protei 97.0 0.027 5.8E-07 62.1 17.2 109 641-759 237-351 (373)
137 COG0381 WecB UDP-N-acetylgluco 97.0 0.18 4E-06 56.1 23.7 256 405-745 90-351 (383)
138 COG0058 GlgP Glucan phosphoryl 97.0 0.017 3.6E-07 69.1 16.1 143 564-715 479-630 (750)
139 PLN02554 UDP-glycosyltransfera 96.9 0.71 1.5E-05 53.8 28.6 88 641-741 342-447 (481)
140 PLN02173 UDP-glucosyl transfer 96.8 1.4 3.1E-05 50.8 31.0 94 640-748 316-420 (449)
141 PLN02562 UDP-glycosyltransfera 96.8 1.1 2.4E-05 51.7 29.3 139 571-742 273-420 (448)
142 PRK02797 4-alpha-L-fucosyltran 96.7 0.17 3.6E-06 54.9 19.7 171 572-773 145-318 (322)
143 PLN02670 transferase, transfer 96.5 2 4.3E-05 50.0 28.6 77 643-729 341-427 (472)
144 PRK14986 glycogen phosphorylas 96.5 0.023 4.9E-07 68.8 12.6 151 563-723 534-702 (815)
145 PLN02410 UDP-glucoronosyl/UDP- 96.4 2.9 6.2E-05 48.4 29.1 92 641-747 324-421 (451)
146 COG3980 spsG Spore coat polysa 96.3 0.1 2.2E-06 55.4 15.0 140 571-747 158-305 (318)
147 PF08288 PIGA: PIGA (GPI ancho 96.3 0.016 3.5E-07 50.9 7.5 71 360-441 14-86 (90)
148 PF07429 Glyco_transf_56: 4-al 96.3 0.39 8.5E-06 52.8 19.4 121 572-706 184-306 (360)
149 COG4671 Predicted glycosyl tra 96.2 0.78 1.7E-05 50.5 21.2 134 570-729 218-363 (400)
150 PLN02210 UDP-glucosyl transfer 96.1 4.1 8.9E-05 47.2 30.8 70 652-729 331-413 (456)
151 TIGR02093 P_ylase glycogen/sta 96.0 0.032 7E-07 67.3 10.8 151 563-723 518-686 (794)
152 PRK14985 maltodextrin phosphor 96.0 0.017 3.7E-07 69.5 8.3 150 564-723 521-688 (798)
153 KOG1050 Trehalose-6-phosphate 96.0 0.28 6.1E-06 59.4 18.5 292 394-730 128-439 (732)
154 PRK14089 ipid-A-disaccharide s 95.7 0.19 4.2E-06 55.9 14.4 91 573-696 169-261 (347)
155 PF06258 Mito_fiss_Elm1: Mitoc 95.6 1.2 2.5E-05 49.0 19.9 110 570-699 145-259 (311)
156 PLN02863 UDP-glucoronosyl/UDP- 95.5 6.6 0.00014 45.8 29.8 79 641-729 343-431 (477)
157 PF11440 AGT: DNA alpha-glucos 95.3 2.9 6.3E-05 44.6 20.5 146 569-729 177-351 (355)
158 PLN00414 glycosyltransferase f 95.2 7.8 0.00017 44.8 32.4 89 652-750 319-418 (446)
159 COG3660 Predicted nucleoside-d 95.1 4.5 9.7E-05 43.0 20.9 112 569-700 159-276 (329)
160 PLN02555 limonoid glucosyltran 95.0 9.3 0.0002 44.6 30.5 95 640-749 336-442 (480)
161 PF00343 Phosphorylase: Carboh 94.9 0.34 7.4E-06 58.1 13.9 149 564-722 436-602 (713)
162 COG1817 Uncharacterized protei 94.4 5.9 0.00013 43.1 20.2 57 666-729 253-312 (346)
163 PLN02992 coniferyl-alcohol glu 94.3 14 0.0003 43.2 27.2 78 642-729 339-425 (481)
164 PF04101 Glyco_tran_28_C: Glyc 91.9 0.083 1.8E-06 52.0 1.8 91 641-746 55-155 (167)
165 COG2327 WcaK Polysaccharide py 91.8 26 0.00057 39.5 26.8 98 631-741 256-357 (385)
166 PF04464 Glyphos_transf: CDP-G 90.7 1.5 3.3E-05 48.8 10.6 132 563-729 185-334 (369)
167 PF00201 UDPGT: UDP-glucoronos 90.5 1.3 2.8E-05 51.6 10.1 133 571-744 276-418 (500)
168 PF05159 Capsule_synth: Capsul 89.4 22 0.00047 37.9 17.7 125 569-723 114-246 (269)
169 cd03789 GT1_LPS_heptosyltransf 89.2 2.4 5.1E-05 45.3 10.2 99 574-696 124-224 (279)
170 PLN03004 UDP-glycosyltransfera 87.8 7.4 0.00016 45.0 13.5 85 641-741 334-430 (451)
171 PRK10422 lipopolysaccharide co 85.7 6.9 0.00015 43.4 11.6 103 571-695 183-287 (352)
172 PF10933 DUF2827: Protein of u 84.7 8.7 0.00019 42.7 11.3 180 563-769 180-363 (364)
173 PF01075 Glyco_transf_9: Glyco 84.3 7.4 0.00016 40.5 10.4 103 570-695 104-208 (247)
174 KOG0853 Glycosyltransferase [C 84.2 3.1 6.7E-05 48.2 7.9 100 470-603 205-304 (495)
175 PF08660 Alg14: Oligosaccharid 81.1 18 0.00039 36.1 11.2 63 406-487 91-159 (170)
176 PLN02167 UDP-glycosyltransfera 80.8 12 0.00025 43.7 11.2 79 641-729 340-432 (475)
177 TIGR02195 heptsyl_trn_II lipop 80.4 14 0.0003 40.6 11.2 100 571-695 173-276 (334)
178 TIGR02193 heptsyl_trn_I lipopo 79.6 16 0.00035 39.7 11.3 99 571-695 179-279 (319)
179 TIGR03609 S_layer_CsaB polysac 78.9 99 0.0021 33.3 17.5 86 587-695 190-275 (298)
180 TIGR02201 heptsyl_trn_III lipo 78.5 17 0.00036 40.2 11.1 102 572-695 182-285 (344)
181 PF10087 DUF2325: Uncharacteri 78.2 4.9 0.00011 36.1 5.6 84 606-704 2-90 (97)
182 PLN03015 UDP-glucosyl transfer 78.1 1.5E+02 0.0032 34.7 29.0 72 652-729 342-424 (470)
183 COG0859 RfaF ADP-heptose:LPS h 76.8 18 0.00038 40.0 10.7 99 572-696 176-277 (334)
184 PF01975 SurE: Survival protei 76.3 22 0.00048 36.4 10.3 38 279-342 1-38 (196)
185 PLN00164 glucosyltransferase; 75.6 43 0.00093 39.1 13.8 51 679-729 367-429 (480)
186 PF06925 MGDG_synth: Monogalac 74.5 16 0.00034 36.1 8.6 60 405-488 87-151 (169)
187 PLN02764 glycosyltransferase f 74.1 49 0.0011 38.4 13.6 86 652-747 324-420 (453)
188 PLN02152 indole-3-acetate beta 72.5 45 0.00096 38.8 12.8 141 571-729 261-415 (455)
189 PRK10964 ADP-heptose:LPS hepto 72.0 28 0.0006 38.0 10.6 96 574-695 181-278 (322)
190 PF12038 DUF3524: Domain of un 71.3 12 0.00026 37.3 6.6 83 406-496 58-141 (168)
191 PF03401 TctC: Tripartite tric 70.7 55 0.0012 35.1 12.4 148 573-747 79-244 (274)
192 PF11997 DUF3492: Domain of un 70.3 9.4 0.0002 41.1 6.2 80 406-485 171-256 (268)
193 PF04413 Glycos_transf_N: 3-De 69.4 19 0.00042 36.4 8.0 68 407-487 95-162 (186)
194 PRK10916 ADP-heptose:LPS hepto 68.0 37 0.00081 37.5 10.7 99 573-695 182-286 (348)
195 PRK02122 glucosamine-6-phospha 66.6 33 0.00071 41.7 10.4 106 208-340 291-408 (652)
196 PLN02207 UDP-glycosyltransfera 65.5 65 0.0014 37.6 12.3 79 641-729 332-424 (468)
197 TIGR00715 precor6x_red precorr 62.4 32 0.0007 36.7 8.4 54 666-727 198-253 (256)
198 PF03016 Exostosin: Exostosin 60.8 20 0.00044 38.4 6.7 70 655-725 227-299 (302)
199 COG1618 Predicted nucleotide k 60.8 1.9E+02 0.004 29.1 12.4 130 275-439 2-139 (179)
200 COG1703 ArgK Putative periplas 59.7 81 0.0017 34.6 10.6 103 318-440 70-176 (323)
201 PRK13932 stationary phase surv 56.1 1.8E+02 0.0039 31.1 12.6 35 404-438 88-133 (257)
202 TIGR00087 surE 5'/3'-nucleotid 54.4 2E+02 0.0043 30.5 12.6 36 404-439 83-129 (244)
203 COG2910 Putative NADH-flavin r 53.9 13 0.00028 37.8 3.3 33 279-340 1-33 (211)
204 PRK06988 putative formyltransf 48.9 84 0.0018 34.6 9.1 19 318-339 16-34 (312)
205 PF04230 PS_pyruv_trans: Polys 48.5 3.1E+02 0.0067 27.9 16.8 94 584-696 189-283 (286)
206 PLN02534 UDP-glycosyltransfera 46.0 2.9E+02 0.0064 32.4 13.4 77 641-729 344-442 (491)
207 COG1647 Esterase/lipase [Gener 44.7 1.1E+02 0.0024 32.1 8.5 43 394-438 73-115 (243)
208 COG4088 Predicted nucleotide k 43.7 1.1E+02 0.0024 31.9 8.2 49 388-438 56-108 (261)
209 KOG1021 Acetylglucosaminyltran 42.5 2.2E+02 0.0047 33.2 11.6 97 656-758 335-434 (464)
210 PRK08057 cobalt-precorrin-6x r 39.7 1.7E+02 0.0037 31.1 9.4 40 396-438 57-100 (248)
211 COG0482 TrmU Predicted tRNA(5- 39.1 64 0.0014 36.1 6.2 106 301-440 11-126 (356)
212 PRK10840 transcriptional regul 38.4 3.9E+02 0.0085 26.8 11.7 110 604-730 4-125 (216)
213 PRK13933 stationary phase surv 38.3 5.3E+02 0.011 27.6 12.7 35 404-438 84-129 (253)
214 KOG1192 UDP-glucuronosyl and U 37.4 4.7E+02 0.01 30.1 13.5 141 572-746 278-433 (496)
215 KOG4626 O-linked N-acetylgluco 37.0 3E+02 0.0066 33.2 11.2 159 562-748 751-917 (966)
216 COG0569 TrkA K+ transport syst 37.0 1.6E+02 0.0036 30.6 8.7 30 406-435 65-97 (225)
217 PLN02764 glycosyltransferase f 36.6 4E+02 0.0087 31.0 12.5 38 279-341 6-43 (453)
218 PRK13935 stationary phase surv 35.5 5.8E+02 0.013 27.3 12.5 35 404-438 83-128 (253)
219 TIGR02990 ectoine_eutA ectoine 34.5 2.8E+02 0.0062 29.3 10.0 34 405-438 179-214 (239)
220 COG3580 Uncharacterized protei 34.3 3.7E+02 0.0079 29.7 10.6 166 574-770 23-195 (351)
221 KOG2452 Formyltetrahydrofolate 33.3 36 0.00079 38.7 3.1 38 279-347 1-38 (881)
222 COG2236 Predicted phosphoribos 33.0 1E+02 0.0023 31.5 6.2 49 385-434 8-56 (192)
223 PF13407 Peripla_BP_4: Peripla 32.8 2.4E+02 0.0053 28.9 9.3 74 625-698 15-89 (257)
224 PLN00016 RNA-binding protein; 32.3 45 0.00097 37.3 3.8 20 318-341 71-90 (378)
225 PF15024 Glyco_transf_18: Glyc 31.4 4.6E+02 0.01 31.3 11.7 127 571-730 276-429 (559)
226 TIGR00732 dprA DNA protecting 31.1 3.6E+02 0.0078 28.1 10.0 125 584-723 82-218 (220)
227 PRK03359 putative electron tra 30.7 1.6E+02 0.0035 31.5 7.4 34 407-440 112-149 (256)
228 COG3171 Uncharacterized protei 30.7 41 0.0009 31.1 2.5 32 232-263 25-60 (119)
229 PRK05562 precorrin-2 dehydroge 30.2 5.9E+02 0.013 26.7 11.3 125 603-752 48-179 (223)
230 KOG0832 Mitochondrial/chloropl 29.6 6.4E+02 0.014 26.7 11.1 58 666-729 174-233 (251)
231 PF02571 CbiJ: Precorrin-6x re 29.6 2E+02 0.0044 30.6 8.0 40 396-438 58-101 (249)
232 TIGR03642 cas_csx13 CRISPR-ass 29.5 2E+02 0.0044 27.3 7.0 102 318-430 9-116 (124)
233 PF10649 DUF2478: Protein of u 28.9 1E+02 0.0022 30.6 5.2 40 656-695 84-129 (159)
234 COG4195 Phage-related replicat 28.9 64 0.0014 32.7 3.7 61 246-323 8-68 (208)
235 COG1830 FbaB DhnA-type fructos 28.5 5.4E+02 0.012 27.7 10.7 125 574-729 116-257 (265)
236 PRK04531 acetylglutamate kinas 28.4 1.5E+02 0.0032 33.9 7.1 55 570-642 35-91 (398)
237 PRK04020 rps2P 30S ribosomal p 28.1 3.1E+02 0.0066 28.4 8.6 125 582-729 47-174 (204)
238 TIGR01012 Sa_S2_E_A ribosomal 27.9 1.7E+02 0.0037 30.1 6.7 124 582-729 41-168 (196)
239 COG0496 SurE Predicted acid ph 27.8 6.3E+02 0.014 27.1 11.1 42 399-440 74-127 (252)
240 COG3473 Maleate cis-trans isom 27.7 7.2E+02 0.016 26.0 11.5 33 405-437 177-211 (238)
241 PRK13398 3-deoxy-7-phosphohept 27.5 6.8E+02 0.015 26.9 11.6 111 575-697 28-142 (266)
242 PRK12342 hypothetical protein; 27.2 1.9E+02 0.004 31.0 7.1 34 407-440 109-146 (254)
243 PLN02534 UDP-glycosyltransfera 26.9 7.3E+02 0.016 29.2 12.6 37 279-340 9-45 (491)
244 PF08672 APC2: Anaphase promot 26.9 28 0.00061 28.7 0.7 36 5-40 13-51 (60)
245 PLN02657 3,8-divinyl protochlo 26.6 67 0.0015 36.3 4.0 52 261-341 43-94 (390)
246 PRK10360 DNA-binding transcrip 26.3 5.9E+02 0.013 24.5 11.5 75 656-730 37-117 (196)
247 PRK00676 hemA glutamyl-tRNA re 26.1 9.5E+02 0.021 26.8 13.3 126 602-751 173-306 (338)
248 COG0052 RpsB Ribosomal protein 26.0 4.4E+02 0.0095 28.1 9.4 146 549-717 5-203 (252)
249 COG1519 KdtA 3-deoxy-D-manno-o 25.9 4.7E+02 0.01 30.1 10.3 103 572-696 50-153 (419)
250 cd03146 GAT1_Peptidase_E Type 25.7 4.3E+02 0.0093 27.1 9.5 100 584-699 14-124 (212)
251 PF09752 DUF2048: Uncharacteri 25.6 4E+02 0.0087 29.9 9.5 33 406-438 173-205 (348)
252 PF05686 Glyco_transf_90: Glyc 25.5 1E+02 0.0023 35.0 5.2 80 686-771 234-317 (395)
253 CHL00194 ycf39 Ycf39; Provisio 25.2 69 0.0015 34.8 3.6 33 279-340 1-33 (317)
254 COG1832 Predicted CoA-binding 25.0 4.9E+02 0.011 25.3 8.7 107 278-434 16-124 (140)
255 PF03358 FMN_red: NADPH-depend 24.6 72 0.0016 30.4 3.3 38 279-338 1-38 (152)
256 PF03033 Glyco_transf_28: Glyc 24.4 47 0.001 30.9 1.9 28 301-340 8-35 (139)
257 TIGR01286 nifK nitrogenase mol 24.4 1.2E+03 0.026 27.7 13.8 82 626-729 235-335 (515)
258 PRK08229 2-dehydropantoate 2-r 23.9 76 0.0016 34.9 3.7 19 318-340 16-34 (341)
259 PF03668 ATP_bind_2: P-loop AT 23.6 2E+02 0.0043 31.4 6.5 118 179-331 123-275 (284)
260 COG1879 RbsB ABC-type sugar tr 23.2 5.3E+02 0.012 27.7 10.2 78 625-702 50-129 (322)
261 PF05728 UPF0227: Uncharacteri 23.1 4.7E+02 0.01 26.5 8.9 31 410-440 61-91 (187)
262 PRK13934 stationary phase surv 22.7 9.8E+02 0.021 25.8 11.8 34 405-438 82-127 (266)
263 PRK05331 putative phosphate ac 22.3 1.1E+03 0.023 26.3 12.2 52 581-647 9-61 (334)
264 smart00672 CAP10 Putative lipo 22.0 2E+02 0.0043 30.7 6.2 61 706-772 188-249 (256)
265 PF04844 Ovate: Transcriptiona 21.8 1.3E+02 0.0027 24.9 3.5 45 10-55 10-54 (59)
266 COG2204 AtoC Response regulato 21.7 1E+03 0.022 27.9 12.2 108 604-730 5-121 (464)
267 TIGR03446 mycothiol_Mca mycoth 21.5 1.3E+02 0.0029 32.6 4.8 22 392-416 109-130 (283)
268 cd01972 Nitrogenase_VnfE_like 20.9 9.8E+02 0.021 27.3 12.1 100 584-695 137-243 (426)
269 PRK05380 pyrG CTP synthetase; 20.8 5.5E+02 0.012 30.6 9.9 99 594-699 279-382 (533)
270 TIGR01278 DPOR_BchB light-inde 20.7 1.4E+03 0.031 26.8 13.9 62 626-695 176-239 (511)
271 PF06258 Mito_fiss_Elm1: Mitoc 20.6 1.1E+03 0.025 25.7 12.9 138 570-716 111-258 (311)
272 PRK13478 phosphonoacetaldehyde 20.5 9E+02 0.019 25.4 11.0 98 583-700 102-207 (267)
273 cd03129 GAT1_Peptidase_E_like 20.5 9E+02 0.019 24.5 11.3 88 602-700 28-125 (210)
274 PF02374 ArsA_ATPase: Anion-tr 20.5 1.9E+02 0.004 31.7 5.8 67 279-369 1-71 (305)
275 cd01020 TroA_b Metal binding p 20.4 3.7E+02 0.008 28.6 8.0 87 659-750 47-134 (264)
276 PRK13940 glutamyl-tRNA reducta 20.4 1.3E+03 0.029 26.4 13.4 47 655-704 233-279 (414)
277 cd01967 Nitrogenase_MoFe_alpha 20.3 1.2E+03 0.027 26.0 14.8 115 583-729 134-256 (406)
278 PLN02327 CTP synthase 20.0 9.8E+02 0.021 28.6 11.7 107 586-699 280-401 (557)
No 1
>PLN00142 sucrose synthase
Probab=100.00 E-value=4.6e-188 Score=1634.66 Aligned_cols=767 Identities=81% Similarity=1.270 Sum_probs=739.7
Q ss_pred CCCCCCCCCcchHHHHHHHHhHhHHHHHHHHHHHHhcCCcccchhhHHHHHHhhhcCcccccccCCCcHHHHHhhcceee
Q 003985 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAI 80 (781)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 80 (781)
|++++|+|++||+|+++++|++|||+|++||+||+++||++||+|||+++|+++++++.++.++.+|+||++|++|||||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 81 (815)
T PLN00142 2 AAAPVLTRSHSIRERVPDALSQHRNELKALLSRYVAQGKGILQPHQLIDELEAVIDDDEERKKLLDGPFGDILRSTQEAI 81 (815)
T ss_pred CCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhhh
Confidence 56689999999999999999999999999999999999999999999999999987777788899999999999999999
Q ss_pred ecCCeEEEEEcCCCceEEEEEEecCcceeeecChHHHhhhcchhcccccCCCceeeeeccccccCCCCCCCCCCCCchhh
Q 003985 81 VLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQ 160 (781)
Q Consensus 81 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (781)
|.|||||||||||||+|||||||++||+||+|||+|||+|||+|||++.+++++|||||+|||++|||||+|+||||||+
T Consensus 82 ~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~ 161 (815)
T PLN00142 82 VLPPFVALAVRPRPGVWEYVRVNVSELSVEELTVSEYLKFKEELVDGSWNDNFVLELDFEPFNASFPRPTLSSSIGNGVQ 161 (815)
T ss_pred ccCCeeEEEEcCCCcceEEEEEEhhhCceeeecHHHhhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHH
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred hhhhhhhcccCCCCCCchhHHHHHhhcccCCeeeecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCcc
Q 003985 161 FLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 240 (781)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (781)
|||||||||||+|+++++|||||||+|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (815)
T PLN00142 162 FLNRHLSSKLFRDKESLEPLLDFLRAHNHKGETLMLNDRIQTLSKLQSALRKAEEYLSKLPKDTPYSEFEHRFQELGLEK 241 (815)
T ss_pred HHHHHHHHhhccCchhhhhHHHHHHHhhcCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcHHHHHHHHHHHHHhhcCCCcccHhhhhcCCCCceEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHH
Q 003985 241 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEML 320 (781)
Q Consensus 241 gwg~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~r~p~~~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa 320 (781)
||||||+||+|||++|+|+|++|||++||+|++||||+|||+|||+||||+|.+++|+||||||++||+|||||||++|+
T Consensus 242 gwg~~~~~~~~~~~~l~~~~~~p~~~~~e~f~~~~p~~~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~ 321 (815)
T PLN00142 242 GWGDTAERVLETIHLLLDLLQAPDPSTLEKFLGRIPMVFNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEML 321 (815)
T ss_pred CcCccHHHHHHHHHHHHHHHhCCChhHHHHHHhhhhHhHhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHH
Q 003985 321 LRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEI 400 (781)
Q Consensus 321 ~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i 400 (781)
++|+++||+|+|+|+|+||.+++..+++|+++.|.+.++++++|+|+||++.++++++|+||+++|||+..|+.++.+.+
T Consensus 322 ~~l~~~G~~v~~~v~i~TR~i~~~~~~~~~~~~e~v~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~ 401 (815)
T PLN00142 322 LRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEI 401 (815)
T ss_pred HHHHhcCCCccceeEEEEeccCCccCCcccCcceeccCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999977899999999999999999999999999
Q ss_pred HHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEe
Q 003985 401 TAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480 (781)
Q Consensus 401 ~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt 480 (781)
.+..+++||+||+|||+++++|.++++++|||+|+|+|++++.|+..++.+|+..+..|+|++|+++|.++++.||+||+
T Consensus 402 ~~~~~~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIa 481 (815)
T PLN00142 402 LAELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIIT 481 (815)
T ss_pred HHhcCCCCCEEEECCccHHHHHHHHHHHhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHh
Confidence 77667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccc
Q 003985 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (781)
Q Consensus 481 ~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~ 560 (781)
+|+++++++++.++||++|.+|+||++|++++|++++.+|++|||||+|.+.|+|+.....+++.+++.|++++|++++.
T Consensus 482 sT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~ 561 (815)
T PLN00142 482 STYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQN 561 (815)
T ss_pred CcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHH
Confidence 99999999999999999999999999999999999999999999999999999999988888899999999999999999
Q ss_pred ccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003985 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (781)
Q Consensus 561 ~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~ 640 (781)
++++|++.++++++|+++||+++.||++.|++|++++.+.+++++|+|||++.++..+.+.++.++.++++++++++++.
T Consensus 562 ~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~ 641 (815)
T PLN00142 562 DEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLK 641 (815)
T ss_pred HHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCC
Confidence 99999887888999999999999999999999999998777889999999986555667788888889999999999999
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHH
Q 003985 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 720 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~ 720 (781)
++|+|+|.+.+..+.+++++++++++|+||+||++|+||++++||||||+|||||+.||+.|+|.+|++|++++|+|+++
T Consensus 642 ~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~ea 721 (815)
T PLN00142 642 GQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDE 721 (815)
T ss_pred CcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHH
Confidence 99999998888888899999999768999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003985 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 721 lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll 769 (781)
+|++|.+++++|..|++.|++|+++|++++.++|||+. +++.+.++.
T Consensus 722 LA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~--~A~rll~L~ 768 (815)
T PLN00142 722 AANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKI--YAERLLTLG 768 (815)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH--HHHHHHHHH
Confidence 99999999988999999999999999999999999966 445555554
No 2
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=2.7e-181 Score=1578.23 Aligned_cols=744 Identities=73% Similarity=1.187 Sum_probs=716.7
Q ss_pred HHHHHHHHHHHHhcCCcccchhhHHHHHHhhhcCcccccccCCCcHHHHHhhcceeeecCCeEEEEEcCCCceEEEEEEe
Q 003985 24 RNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVN 103 (781)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~ 103 (781)
|++|++||+||+++||++||+|||+++|+++|.++.++.++.+|+||++|++||||||.|||||||||||||+|||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qe~~~~~~~~~~~~r~~~~~~~~~~~~ 80 (784)
T TIGR02470 1 RAELRQLLSRYVSQGKRYLLRHQLLDEFEQYCSDADKEKKLSESALGKLIFSTQEAIVLPPWVALAVRPRIGVWEYVRVN 80 (784)
T ss_pred ChHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhheecCCeeEEEEcCCCcceEEEEEE
Confidence 78999999999999999999999999999999776667889999999999999999999999999999999999999999
Q ss_pred cCcceeeecChHHHhhhcchhcccccCCCceeeeeccccccCCCCCCCCCCCCchhhhhhhhhhcccCCCCCCchhHHHH
Q 003985 104 VYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDF 183 (781)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (781)
++||+||+|||+|||+|||+|||++.+++++|||||+|||++|||||+||||||||+|||||||||||+|++++++||||
T Consensus 81 ~~~l~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~~~~r~~s~~~~~~~~~~~~~~~~ 160 (784)
T TIGR02470 81 VEELSVEELTISEYLDFKEQLVNGHPNDGFVLELDFEPFNASFPRPSDSKSIGNGVQFLNRHLSSKLFQDPESMEPLLNF 160 (784)
T ss_pred hhhCceeeecHHHHhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHHHHHHHHHHHhcCCchhhhhHHHH
Confidence 99999999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCeeeecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCccccCCcHHHHHHHHHHHHHhhcCC
Q 003985 184 LRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAP 263 (781)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~~~~~~~~p 263 (781)
||.|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+|+|++|
T Consensus 161 l~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~~~~~~~~~l~~~~~~p 240 (784)
T TIGR02470 161 LRVHNYNGIQLMINDRIQSVSHLQSQLRKAEEFLSALPPDTPYSEFEFELQELGFEPGWGDTAQRVLETLHLLDDLLEAP 240 (784)
T ss_pred HHHhccCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHhCCCCCcCccHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccHhhhhcCCCCceEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCC
Q 003985 264 DPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPD 343 (781)
Q Consensus 264 ~~~~~~~f~~r~p~~~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~ 343 (781)
||++||+|++||||+|||+|||+|||++|.+++|.||||||.+||++|||+||++|+++|+++||+|+|+|+|+||.+++
T Consensus 241 ~~~~~e~f~~~~p~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~ 320 (784)
T TIGR02470 241 DPSVLEAFLGRIPMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPD 320 (784)
T ss_pred ChhHHHHHHhhCCccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCcceeeecCCCCeEEEEeccCCCcc-cccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHH
Q 003985 344 AKGTTCNQRLERVSGTEHTHILRVPFRSEKG-ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVA 422 (781)
Q Consensus 344 ~~~~~~~~~~e~v~~~~~~~I~rvP~~~~~~-~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva 422 (781)
+.++.|+++.+.+.++++++|+|+|+++..+ ++++|++|+++|||+..|+.++.+.+.+..+++||+||+|||+++++|
T Consensus 321 ~~~~~~~~~~e~~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva 400 (784)
T TIGR02470 321 AEGTTCNQRLEKVYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVA 400 (784)
T ss_pred ccccccccccccccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHH
Confidence 9999999999999999999999999999877 799999999999999999999999998777789999999999999999
Q ss_pred HHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhcccccccccccccc
Q 003985 423 SLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAF 502 (781)
Q Consensus 423 ~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f 502 (781)
.++++++|+|+|+|+|++++.|+..++.+|...+.+|+++++++++.++|+.||+|||+|+++++++++.++||++|..|
T Consensus 401 ~lla~~lgVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~f 480 (784)
T TIGR02470 401 SLLARKLGVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAF 480 (784)
T ss_pred HHHHHhcCCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccc
Confidence 99999999999999999999999999999998999999999999999999999999999999999999999999999999
Q ss_pred ccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeecc
Q 003985 503 TLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD 582 (781)
Q Consensus 503 ~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~ 582 (781)
+||++|++++|++++++|++|||||+|.+.|+|++....+...+++.+++++|++++.++++|++.++++|+|+++||++
T Consensus 481 t~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~ 560 (784)
T TIGR02470 481 TMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLD 560 (784)
T ss_pred cccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCC
Confidence 99999999999999999999999999999999999888888888999999999999999999998889999999999999
Q ss_pred CCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHH
Q 003985 583 HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYI 662 (781)
Q Consensus 583 ~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~l 662 (781)
+.||++.|++|++++++..++++|+|||++..+..+.|+++.+++++++++++++++.++|+|+|++.+..+.+++|+++
T Consensus 561 ~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~i 640 (784)
T TIGR02470 561 RVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYI 640 (784)
T ss_pred ccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHh
Confidence 99999999999999877777899999999987677888899999999999999999999999999876677788999999
Q ss_pred HccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHH
Q 003985 663 ADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKI 742 (781)
Q Consensus 663 a~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~ 742 (781)
++++|+||+||++|+||++++|||+||+|||||++||+.|+|.+|.+|++++|+|++++|++|.+++++|..||+.|++|
T Consensus 641 Ad~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~m 720 (784)
T TIGR02470 641 ADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKI 720 (784)
T ss_pred hccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 87789999999999999999999999999999999999999999999999999999999999999998888999999999
Q ss_pred HHHHHHHHHHhcCcchhhhccchHHHH
Q 003985 743 SDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 743 s~~a~~~v~~~ysw~~~~il~~ye~ll 769 (781)
+++|++++.++|||+.+ ++.+.++.
T Consensus 721 s~~a~~rV~~~FSW~~~--A~~ll~l~ 745 (784)
T TIGR02470 721 SQGGLQRIYEKYTWKIY--SERLLTLA 745 (784)
T ss_pred HHHHHHHHHHhCCHHHH--HHHHHHHH
Confidence 99999999999999764 44454444
No 3
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=100.00 E-value=4.8e-175 Score=1418.72 Aligned_cols=550 Identities=76% Similarity=1.203 Sum_probs=475.6
Q ss_pred CCCcchHHHHHHHHhHhHHHHHHHHHHHHhcCCcccchhhHHHHHHhhhcCcccccccCCCcHHHHHhhcceeeecCCeE
Q 003985 7 SRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFV 86 (781)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 86 (781)
||++||+|+|+++|++||++|++||+||+++||+|||||||+++|+++|+++.++.++.+|+||++|++||||||.||||
T Consensus 1 tr~~s~~e~~~~~L~~~R~~l~~llsr~~~~gk~~l~r~~ll~ef~~~~~~~~~~~~~~~g~lg~ll~~tQEaIv~pp~v 80 (550)
T PF00862_consen 1 TRSHSIRERVPDTLSQHRNELKRLLSRYVAQGKRYLLRHDLLDEFEAYCEDDKEKLFLLSGPLGELLRSTQEAIVLPPWV 80 (550)
T ss_dssp -------GGGTTTGGGTTSHHHHHHHHHHHHHTSSEEEECHHHHHTHHHHSTTTGCCT--STHHHHHHTEEEEEECSSEE
T ss_pred CcchhHHHHHHHHHHHhHHHHHHHHHHHHHcCcccccHHHHHHHHHHHHhcccchhhcccchHHHHHHhcceeEecCCeE
Confidence 79999999999999999999999999999999999999999999999998777778888999999999999999999999
Q ss_pred EEEEcCCCceEEEEEEecCcceeeecChHHHhhhcchhcccccCCCceeeeeccccccCCCCCCCCCCCCchhhhhhhhh
Q 003985 87 AIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHL 166 (781)
Q Consensus 87 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (781)
|||||||||+|||||||+++|+||+|||+|||+|||+|||++++++++|||||+|||++||+|++||||||||+||||||
T Consensus 81 ~lavRPrpg~WeyvRv~~~~L~vE~ltvseyL~fKE~LV~~~~~~~~vLElDf~PFn~~~Prlt~s~sIGnGv~FLNR~L 160 (550)
T PF00862_consen 81 ALAVRPRPGVWEYVRVNVDDLSVEELTVSEYLKFKERLVDGSANDEFVLELDFEPFNASFPRLTDSSSIGNGVQFLNRHL 160 (550)
T ss_dssp EEEEEEETTEEEEEEEESSSSEEEEE-HHHHHHHHHHHHHSS-SSTTS-EEE-GGGHTTS----SGGGTTBHHHHHHHHH
T ss_pred EEEEcCCCccEEEEEEEhhhCcceecCHHHHHHHHHHHcCCccCCCCeeeeecccccccCCCCCCcccccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCchhHHHHHhhcccCCeeeecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCccccCCcH
Q 003985 167 SSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTA 246 (781)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gwg~~~ 246 (781)
|||||+|++++++||+|||+|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||
T Consensus 161 Ssklf~d~e~~~~Ll~fL~~h~~~G~~Lmlndri~s~~~L~~aL~~A~~~L~~~p~~tpy~~f~~~~q~~Gfe~GWG~ta 240 (550)
T PF00862_consen 161 SSKLFQDKESLEPLLDFLRVHNYNGQQLMLNDRIQSVSKLQSALRKAEEFLSKLPPDTPYSEFEHKLQELGFEPGWGDTA 240 (550)
T ss_dssp HHHHTT-HHHHHHHHHHHHH-EETTEEBSB-TT--SHHHHHHHHHHHHHHHHHS-TT-BHHHHHHHHHHHTB-B-S-SBH
T ss_pred HHHhcCChHHHHHHHHHHHHhccCCeEeeecCCCCCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCCCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCcccHhhhhcCCCCceEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHC
Q 003985 247 EHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQ 326 (781)
Q Consensus 247 ~~~~~~~~~~~~~~~~p~~~~~~~f~~r~p~~~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~ 326 (781)
+||+|||++|+|+|+||||++||+|++||||+|+|||+||||||+|+||||+||||||++||+|||||||++|..++..+
T Consensus 241 ~rv~et~~lL~dll~aPdp~~LE~Fl~RiPmvf~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~ 320 (550)
T PF00862_consen 241 ERVLETMHLLSDLLEAPDPSTLEKFLSRIPMVFNVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQ 320 (550)
T ss_dssp HHHHHHHHHHHHHHHS--HHHHHHHHHHS---SEEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCchHHHHHhhhcceeEEEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeceeEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCC
Q 003985 327 GLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQG 406 (781)
Q Consensus 327 GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~ 406 (781)
|.+|.|+|+|+||.+|++.+++|+++++++.+++|++|+|+||++.+|++++|+||+++|||+++|+.++.+++.+++++
T Consensus 321 gl~i~p~i~i~TRlIpd~~~t~~~q~le~~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e~~~ 400 (550)
T PF00862_consen 321 GLDITPKIDIVTRLIPDAKGTTCNQRLEKVSGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAELQG 400 (550)
T ss_dssp T-----EEEEEEE--TBTTCGGGTSSEEEETTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHHHTS
T ss_pred CCCCCCceeeecccccCCcCCCccccccccCCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHH
Q 003985 407 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 486 (781)
Q Consensus 407 ~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~ 486 (781)
+||+||+||+++|++|+++++++|||+|+|+|+++++||..++++|+.++.+|||+|||+||.++|+.||+|||||+||+
T Consensus 401 ~PdlI~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI 480 (550)
T PF00862_consen 401 KPDLIIGNYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEI 480 (550)
T ss_dssp --SEEEEEHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHH
T ss_pred CCcEEEeccCcchHHHHHHHhhcCCceehhhhccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccC
Q 003985 487 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFD 556 (781)
Q Consensus 487 ~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~ 556 (781)
+|+++++|||+||.+||||+|||+++||++|+|||+|||||+|.++|+|++++++|++.+|++|+++||+
T Consensus 481 ~g~~~~~gqyes~~~ftlpgLyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt~~~~Rl~~~~~~ie~Llfs 550 (550)
T PF00862_consen 481 AGQKDTVGQYESHKAFTLPGLYRVVNGIDVFDPKFNIVSPGADESIYFPYTEKERRLTSLHPEIEELLFS 550 (550)
T ss_dssp HB-SSSBHTTGGGSSEEETTTEEEEES--TT-TTEEE------TTTS--TT-TTTS-GGGHHHHHHHHH-
T ss_pred cCCccccCCccchhhcchHhHHhhhccccccCCcccccCCCCCcceecCCccccccchhhhHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999985
No 4
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=1.2e-57 Score=544.11 Aligned_cols=455 Identities=25% Similarity=0.445 Sum_probs=349.7
Q ss_pred ceEEEEEccCcCCccccc-CCC-CCcccceeehHHHHHHHHHHHHHHHHHCC--CceeeceeEEEccCCCC-CCCccCcc
Q 003985 278 VFNVVILSPHGYFGQANV-LGL-PDTGGQVVYILDQVRALENEMLLRIKRQG--LDISPKILIVTRLIPDA-KGTTCNQR 352 (781)
Q Consensus 278 ~~rI~ivS~hg~~~~~~v-lg~-p~~GG~~vyvld~araL~~eLa~~L~~~G--heV~~~v~VlT~~~p~~-~~~~~~~~ 352 (781)
-|+|++||+||.|..+++ +|+ +|||||.+||+ +|+++|++.| |+|+ |+||.+.+. .+..|.+.
T Consensus 169 ~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~--------ELAraLa~~~gv~~Vd----l~TR~~~~~~~~~~y~~p 236 (1050)
T TIGR02468 169 KLYIVLISLHGLVRGENMELGRDSDTGGQVKYVV--------ELARALGSMPGVYRVD----LLTRQVSSPDVDWSYGEP 236 (1050)
T ss_pred ceEEEEEccccCccccCcccCCCCCCCChHHHHH--------HHHHHHHhCCCCCEEE----EEeCCcCccccccccCCc
Confidence 589999999999988776 884 99999999999 5666678888 7898 999997643 34456666
Q ss_pred eeee------------cCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHH-------c----CCCce
Q 003985 353 LERV------------SGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAE-------L----QGFPD 409 (781)
Q Consensus 353 ~e~v------------~~~~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~-------l----~~~pD 409 (781)
.|.+ ...+|++|+|+|+++.. +++++..+|||+..|+..+...+.+. . ...||
T Consensus 237 ~e~~~~~~~~~~~~~~~~~~g~rIvRip~GP~~----~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pD 312 (1050)
T TIGR02468 237 TEMLTPRSSENDGDEMGESSGAYIIRIPFGPRD----KYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPY 312 (1050)
T ss_pred cccccccccccccccccCCCCeEEEEeccCCCC----CCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCC
Confidence 5433 34569999999999863 36778999999999999998887541 1 12499
Q ss_pred EEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCC----CChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHH
Q 003985 410 FIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYP----DSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (781)
Q Consensus 410 IIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~----~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (781)
|||+|||+++.+|.++++.+++|+|+|.|++...++. .....+...+..|++..++.+|..++..||.|||+|.++
T Consensus 313 vIHaHyw~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE 392 (1050)
T TIGR02468 313 VIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQE 392 (1050)
T ss_pred EEEECcchHHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHH
Confidence 9999999999999999999999999999999877643 122345566778899999999999999999999999999
Q ss_pred Hhhccccccccccccccccccceee-----eccCC---CCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCc
Q 003985 486 IAGTKNTVGQYESHTAFTLPGLYRV-----VHGID---VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDP 557 (781)
Q Consensus 486 ~~~~k~~v~qy~s~~~f~lp~ly~v-----~~gi~---~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~ 557 (781)
+. .||..|..|. |.+|++ ..|+. .+.+|+.|||||+|.+.|.|......+... ..++....+
T Consensus 393 ~~------eq~~lY~~~~-~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~---~~~~~~~~~ 462 (1050)
T TIGR02468 393 IE------EQWGLYDGFD-VILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETE---GNEEHPAKP 462 (1050)
T ss_pred HH------HHHHHhccCC-chhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhc---ccccccccc
Confidence 87 3555454444 444443 23433 346799999999999999986432211000 000000000
Q ss_pred ccc--ccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccC--CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHH
Q 003985 558 EQN--DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLR--ELVNLVVVAGYIDVNKSKDREEIAEIEKMHEL 633 (781)
Q Consensus 558 ~~~--~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~--~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~l 633 (781)
... .+....+.++++++|+++||+++.||++.|++||+++++.. +++. +|+|++++. +.......++...+.++
T Consensus 463 ~~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd~-d~l~~~~~~~l~~L~~l 540 (1050)
T TIGR02468 463 DPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDI-DEMSSGSSSVLTSVLKL 540 (1050)
T ss_pred cchhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCchh-hhhhccchHHHHHHHHH
Confidence 000 00011122678899999999999999999999999987543 3444 466776541 11111223456788999
Q ss_pred HHHcCCCCcEEEeccccCcCChHHHHHHHHccC----cEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCe
Q 003985 634 MKTYKLDGQFRWIAAQTNRARNGELYRYIADTK----GAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGAS 709 (781)
Q Consensus 634 i~el~L~~~V~flG~~~~~v~~~el~~~la~aa----dvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~ 709 (781)
++++++.++|.|+| .++.+++..+|+. + |+||+||++|+||++++||||||+|||||+.||+.|+|.++.+
T Consensus 541 i~~lgL~g~V~FlG----~v~~edvp~lYr~-Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~n 615 (1050)
T TIGR02468 541 IDKYDLYGQVAYPK----HHKQSDVPDIYRL-AAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDN 615 (1050)
T ss_pred HHHhCCCCeEEecC----CCCHHHHHHHHHH-hhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCc
Confidence 99999999999999 5667788888874 4 7999999999999999999999999999999999999999999
Q ss_pred EEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHhc
Q 003985 710 GFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINVI 772 (781)
Q Consensus 710 G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll~~~ 772 (781)
|++++|.|++++|++|.+++ .|++.|++|+++|++++ ++|||+. +++.|.+.+...
T Consensus 616 GlLVdP~D~eaLA~AL~~LL----~Dpelr~~m~~~gr~~v-~~FSWe~--ia~~yl~~i~~~ 671 (1050)
T TIGR02468 616 GLLVDPHDQQAIADALLKLV----ADKQLWAECRQNGLKNI-HLFSWPE--HCKTYLSRIASC 671 (1050)
T ss_pred EEEECCCCHHHHHHHHHHHh----hCHHHHHHHHHHHHHHH-HHCCHHH--HHHHHHHHHHHH
Confidence 99999999999999998887 89999999999999998 5799966 556666665543
No 5
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=1.6e-55 Score=489.05 Aligned_cols=452 Identities=41% Similarity=0.599 Sum_probs=396.0
Q ss_pred ecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCccccCCcHHHHHHHHHHHHHhhcCCCcccHhhhhcC
Q 003985 195 MLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGR 274 (781)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~r 274 (781)
|+||++++.+.+|+++.+|+..++.. .+||+..|.+.+++.++++|||.++.+|.+++++++
T Consensus 1 ~~~~~~~~~~~~qk~~~~~m~~~~~~-~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s----------------- 62 (495)
T KOG0853|consen 1 MTNDSSSNISELQKVLWKAMIEKSLL-VSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS----------------- 62 (495)
T ss_pred CcchhhhHHHHhhhhhhhhhhhhhcc-cccccccchhheeeccccccCchHHHhHHHHHHHHh-----------------
Confidence 78999999999999999999999999 999999999999999999999999999999999998
Q ss_pred CCCceEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCccee
Q 003985 275 LPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLE 354 (781)
Q Consensus 275 ~p~~~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e 354 (781)
++. +||.||+||+++|+++++++|+.++..+..+.+.+++++|.|++...|...+ +..+
T Consensus 63 ----------------~~~-~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~----~~~~ 121 (495)
T KOG0853|consen 63 ----------------GQD-VLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILVVGDWLPRAMG----QFLE 121 (495)
T ss_pred ----------------ccc-ccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCceEEEEeecCcccc----hhhh
Confidence 555 8999999999999999999999999999999999999999999999888765 4556
Q ss_pred eecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEE
Q 003985 355 RVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQC 434 (781)
Q Consensus 355 ~v~~~~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~v 434 (781)
...++.+++|+++|+. ++.+|+ +.+||++..++ .+...+.+.+++ ||++|.++++++..+.+++++.|++.+
T Consensus 122 ~~~~~~~~~il~~~~~----~~~k~~--~~~d~~i~d~~-~~~~~l~~~~~~-p~~~~~i~~~~h~~~~lla~r~g~~~~ 193 (495)
T KOG0853|consen 122 QVAGCAYLRILRIPFG----ILFKWA--EKVDPIIEDFV-SACVPLLKQLSG-PDVIIKIYFYCHFPDSLLAKRLGVLKV 193 (495)
T ss_pred hhhccceeEEEEeccc----hhhhhh--hhhceeecchH-HHHHHHHHHhcC-CcccceeEEeccchHHHhccccCccce
Confidence 6667789999999994 455677 88999999888 566677777776 999999999999999999999999999
Q ss_pred EEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhcccccccccccccccccc-ceeeecc
Q 003985 435 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPG-LYRVVHG 513 (781)
Q Consensus 435 ~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~-ly~v~~g 513 (781)
++.|.++..++...+.+|+.+...|+++++|+++...++.+| ++++++++++...+.++|+++..+++|. .++.+++
T Consensus 194 l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~ 271 (495)
T KOG0853|consen 194 LYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSG 271 (495)
T ss_pred eehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecc
Confidence 999999999999999999999999999999999999999999 9999999999999999999999999999 9999999
Q ss_pred CCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHH
Q 003985 514 IDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVEC 593 (781)
Q Consensus 514 i~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA 593 (781)
+++|.++++++++|.|.+.+.+. .+.++..|.+
T Consensus 272 ~d~~~~siN~~~pgkd~~l~l~a------~~~~~~~i~~----------------------------------------- 304 (495)
T KOG0853|consen 272 IDRFFPSINRFEPGKDQDLALPA------FTLLHDSIPE----------------------------------------- 304 (495)
T ss_pred cceEeeeeeecCCCCCceeehhh------HHhhhcccCC-----------------------------------------
Confidence 99999999999999999887772 1111111000
Q ss_pred HHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcC
Q 003985 594 YGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 673 (781)
Q Consensus 594 ~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS 673 (781)
...++.+++++|+.. .++.++|+.++.++|+++++++++.++++|.-. .....+.|++++++..+|++|+
T Consensus 305 -----~~~~~~hl~~~g~~G--~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~---s~~~~~~yrl~adt~~v~~qPa 374 (495)
T KOG0853|consen 305 -----PSISSEHLVVAGSRG--YDERDSENVEYLKELLSLIEEYDLLGQFVWFLP---STTRVAKYRLAADTKGVLYQPA 374 (495)
T ss_pred -----CCCCceEEEEecCCC--ccccchhhHHHHHHHHHHHHHhCccCceEEEec---CCchHHHHHHHHhcceEEecCC
Confidence 112456677666321 457899999999999999999999765655532 2334566999999888999999
Q ss_pred CCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHH---HHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 003985 674 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPD---QAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (781)
Q Consensus 674 ~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e---~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v 750 (781)
. |.||+|++|||+||+|||||+.||+.|+|.++.+|++++| +.+ .+|++| .+|..||++|.+|+++|++++
T Consensus 375 ~-E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~a~~~----~kl~~~p~l~~~~~~~G~~rV 448 (495)
T KOG0853|consen 375 N-EHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAELADAL----LKLRRDPELWARMGKNGLKRV 448 (495)
T ss_pred C-CCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chHHHHHHHHHH----HHHhcCHHHHHHHHHHHHHHH
Confidence 9 9999999999999999999999999999999999999999 555 366666 455599999999999999999
Q ss_pred HHhcCcch
Q 003985 751 YERLVVSS 758 (781)
Q Consensus 751 ~~~ysw~~ 758 (781)
++.|||+.
T Consensus 449 ~e~fs~~~ 456 (495)
T KOG0853|consen 449 KEMFSWQH 456 (495)
T ss_pred HHHHhHHH
Confidence 99999954
No 6
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=4.8e-51 Score=463.88 Aligned_cols=423 Identities=28% Similarity=0.526 Sum_probs=316.7
Q ss_pred eEEEEEccCcCCcccc-cCCC-CCcccceeehHHHHHHHHHHHHHHHHHCCC--ceeeceeEEEccCCCCC-CCccCcce
Q 003985 279 FNVVILSPHGYFGQAN-VLGL-PDTGGQVVYILDQVRALENEMLLRIKRQGL--DISPKILIVTRLIPDAK-GTTCNQRL 353 (781)
Q Consensus 279 ~rI~ivS~hg~~~~~~-vlg~-p~~GG~~vyvld~araL~~eLa~~L~~~Gh--eV~~~v~VlT~~~p~~~-~~~~~~~~ 353 (781)
+||+++|+||+|+|.+ ++|. |+.||+++|+. +|+++|+++|| +|+ |+|+..++.. ++.+....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~--------~La~~L~~~G~~~~V~----v~t~~~~~~~~~~~~~~~~ 68 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVL--------ELARALARRSEVEQVD----LVTRLIKDAKVSPDYAQPI 68 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHH--------HHHHHHHhCCCCcEEE----EEeccccCcCCCCccCCCe
Confidence 4899999999999988 7775 99999999999 77778899997 999 9998765421 12333333
Q ss_pred eeecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE
Q 003985 354 ERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 433 (781)
Q Consensus 354 e~v~~~~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~ 433 (781)
+.. .++++|+|+|+... .|.++...++|+..+...+.+.+.+. ..+|||||+|++.++.++.++++..++|+
T Consensus 69 ~~~--~~gv~v~r~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~DvIH~h~~~~~~~~~~~~~~~~~p~ 140 (439)
T TIGR02472 69 ERI--APGARIVRLPFGPR-----RYLRKELLWPYLDELADNLLQHLRQQ-GHLPDLIHAHYADAGYVGARLSRLLGVPL 140 (439)
T ss_pred eEe--CCCcEEEEecCCCC-----CCcChhhhhhhHHHHHHHHHHHHHHc-CCCCCEEEEcchhHHHHHHHHHHHhCCCE
Confidence 322 34799999998653 24455677888888877777766542 34799999999888999999999999999
Q ss_pred EEEecCCccccCC---CChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceee
Q 003985 434 CTIAHALEKTKYP---DSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRV 510 (781)
Q Consensus 434 v~t~H~l~~~k~~---~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v 510 (781)
|+|.|+....+.. .....++.+...|++......+..+++.+|.||++|.+++.. ++ ..
T Consensus 141 V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~------~~------------~~ 202 (439)
T TIGR02472 141 IFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEE------QY------------AL 202 (439)
T ss_pred EEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHH------HH------------Hh
Confidence 9999986432211 111112222333444445456778999999999999765431 11 11
Q ss_pred eccCCCCCCceEEecCCCcCCCCCCCcHHHHH--HhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChH
Q 003985 511 VHGIDVFDPKFNIVSPGADMDIYFPYSEKQKR--LTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMT 588 (781)
Q Consensus 511 ~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r--l~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~ 588 (781)
..|++ ..|+.+||||+|.+.|.|....... .+. . ...++. ++++++|+++||+.+.||++
T Consensus 203 ~~~~~--~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~-------~-------~~~~~~--~~~~~~i~~vGrl~~~Kg~~ 264 (439)
T TIGR02472 203 YDSYQ--PERMQVIPPGVDLSRFYPPQSSEETSEIDN-------L-------LAPFLK--DPEKPPILAISRPDRRKNIP 264 (439)
T ss_pred ccCCC--ccceEEECCCcChhhcCCCCccccchhHHH-------H-------HHhhcc--ccCCcEEEEEcCCcccCCHH
Confidence 11333 6799999999999998775322110 000 0 011232 45678999999999999999
Q ss_pred HHHHHHHHhhccCCCeEEE-EEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccC-
Q 003985 589 GLVECYGKNSQLRELVNLV-VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTK- 666 (781)
Q Consensus 589 ~LieA~~~l~~~~~~~~Lv-IVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aa- 666 (781)
.|++|++++....+..+++ |+|+|++ .........++.+++.++++++++.++|+|+| .++.+++..+|+. +
T Consensus 265 ~li~A~~~l~~~~~~~~l~li~G~g~~-~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g----~~~~~~~~~~~~~-a~ 338 (439)
T TIGR02472 265 SLVEAYGRSPKLQEMANLVLVLGCRDD-IRKMESQQREVLQKVLLLIDRYDLYGKVAYPK----HHRPDDVPELYRL-AA 338 (439)
T ss_pred HHHHHHHhChhhhhhccEEEEeCCccc-cccccHHHHHHHHHHHHHHHHcCCCceEEecC----CCCHHHHHHHHHH-Hh
Confidence 9999998754332334444 5677654 11122223345566788899999999999999 5667789888884 4
Q ss_pred ---cEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHH
Q 003985 667 ---GAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKIS 743 (781)
Q Consensus 667 ---dvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s 743 (781)
|+||+||.+|+||++++||||||+|||+|+.||+.|+|.++.+|++++|+|++++|++|.+++ +|++.+++|+
T Consensus 339 ~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~ 414 (439)
T TIGR02472 339 RSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDAL----SDSSQWQLWS 414 (439)
T ss_pred hcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHH----hCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998887 8999999999
Q ss_pred HHHHHHHHHhcCcchhhhccchHHHH
Q 003985 744 DGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 744 ~~a~~~v~~~ysw~~~~il~~ye~ll 769 (781)
++|++++.++|||+. +++.|++++
T Consensus 415 ~~a~~~~~~~fsw~~--~~~~~~~l~ 438 (439)
T TIGR02472 415 RNGIEGVRRHYSWDA--HVEKYLRIL 438 (439)
T ss_pred HHHHHHHHHhCCHHH--HHHHHHHHh
Confidence 999999999999965 667787775
No 7
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=2.7e-42 Score=386.36 Aligned_cols=399 Identities=22% Similarity=0.304 Sum_probs=291.9
Q ss_pred EEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCCC
Q 003985 281 VVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 360 (781)
Q Consensus 281 I~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~~ 360 (781)
|++++.|+.|.. +.+.-+.||.++|+. +|+++|+++||+|+ |+|.......+. ......
T Consensus 1 ~~~~~~~~~~~~--~~~~~~~GG~e~~v~--------~la~~L~~~G~~V~----v~~~~~~~~~~~-------~~~~~~ 59 (405)
T TIGR03449 1 VAMISMHTSPLQ--QPGTGDAGGMNVYIL--------ETATELARRGIEVD----IFTRATRPSQPP-------VVEVAP 59 (405)
T ss_pred CeEEeccCCccc--cCCCcCCCCceehHH--------HHHHHHhhCCCEEE----EEecccCCCCCC-------ccccCC
Confidence 578888887643 244455699999999 77888899999999 999764322111 111124
Q ss_pred CeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCC
Q 003985 361 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHAL 440 (781)
Q Consensus 361 ~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~l 440 (781)
++++++++.....+ .+...+..++..|.....+.+......+||+||+|++.+++.+.++++..++|+|+|.|++
T Consensus 60 ~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~ 134 (405)
T TIGR03449 60 GVRVRNVVAGPYEG-----LDKEDLPTQLCAFTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTL 134 (405)
T ss_pred CcEEEEecCCCccc-----CCHHHHHHHHHHHHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccch
Confidence 68888887654322 1111122222334333443333333458999999998888888888999999999999986
Q ss_pred ccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCc
Q 003985 441 EKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPK 520 (781)
Q Consensus 441 ~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k 520 (781)
...+. .++...... ........+...++.+|.++++|....+...+. .|.+ ..|
T Consensus 135 ~~~~~----~~~~~~~~~-~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~-------------------~~~~--~~k 188 (405)
T TIGR03449 135 AAVKN----AALADGDTP-EPEARRIGEQQLVDNADRLIANTDEEARDLVRH-------------------YDAD--PDR 188 (405)
T ss_pred HHHHH----HhccCCCCC-chHHHHHHHHHHHHhcCeEEECCHHHHHHHHHH-------------------cCCC--hhh
Confidence 43210 010000000 000111234567899999999998765522111 1222 568
Q ss_pred eEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhcc
Q 003985 521 FNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL 600 (781)
Q Consensus 521 ~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~ 600 (781)
+.+||||+|.+.|.+.+....+ .++|+ ++++++|+++||+.+.||++.+++|++++.+.
T Consensus 189 i~vi~ngvd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~ 247 (405)
T TIGR03449 189 IDVVAPGADLERFRPGDRATER-------------------ARLGL--PLDTKVVAFVGRIQPLKAPDVLLRAVAELLDR 247 (405)
T ss_pred EEEECCCcCHHHcCCCcHHHHH-------------------HhcCC--CCCCcEEEEecCCCcccCHHHHHHHHHHHHhh
Confidence 9999999999888765432211 23555 45788999999999999999999999999776
Q ss_pred CCC--eEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCC
Q 003985 601 REL--VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (781)
Q Consensus 601 ~~~--~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 678 (781)
.++ ++|+|+|++... ...+.+.++++++++++.++|+|+| .++.+++..+++. +|++|+||..|+|
T Consensus 248 ~~~~~~~l~ivG~~~~~-------g~~~~~~l~~~~~~~~l~~~v~~~g----~~~~~~~~~~l~~-ad~~v~ps~~E~~ 315 (405)
T TIGR03449 248 DPDRNLRVIVVGGPSGS-------GLATPDALIELAAELGIADRVRFLP----PRPPEELVHVYRA-ADVVAVPSYNESF 315 (405)
T ss_pred CCCcceEEEEEeCCCCC-------cchHHHHHHHHHHHcCCCceEEECC----CCCHHHHHHHHHh-CCEEEECCCCCCc
Confidence 666 999999974320 0023567888999999999999999 6778899999995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcch
Q 003985 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSS 758 (781)
Q Consensus 679 GltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~ 758 (781)
|++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+++|++++++.+ ++|||+.
T Consensus 316 g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l----~~~~~~~~~~~~~~~~~-~~fsw~~ 390 (405)
T TIGR03449 316 GLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLL----DDPRTRIRMGAAAVEHA-AGFSWAA 390 (405)
T ss_pred ChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HhCCHHH
Confidence 999999999999999999999999999999999999999999999998887 79999999999999987 7899976
Q ss_pred hhhccchHHHHHh
Q 003985 759 DGIVDPSPFVINV 771 (781)
Q Consensus 759 ~~il~~ye~ll~~ 771 (781)
+ ++.|.+++..
T Consensus 391 ~--~~~~~~~y~~ 401 (405)
T TIGR03449 391 T--ADGLLSSYRD 401 (405)
T ss_pred H--HHHHHHHHHH
Confidence 4 4556666543
No 8
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=1.8e-42 Score=396.47 Aligned_cols=425 Identities=17% Similarity=0.187 Sum_probs=283.6
Q ss_pred eEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCcc-Ccceeee-
Q 003985 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTC-NQRLERV- 356 (781)
Q Consensus 279 ~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~-~~~~e~v- 356 (781)
|||++||.+.+|- ..+||+..+|. .|+++|+++||+|. |+|+.++....... ......+
T Consensus 1 m~i~~vs~e~~P~-------~k~GGl~~~v~--------~L~~~L~~~G~~V~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (466)
T PRK00654 1 MKILFVASECAPL-------IKTGGLGDVVG--------ALPKALAALGHDVR----VLLPGYPAIREKLRDAQVVGRLD 61 (466)
T ss_pred CeEEEEEcccccC-------cccCcHHHHHH--------HHHHHHHHCCCcEE----EEecCCcchhhhhcCceEEEEee
Confidence 7999999998853 34899999999 77778899999999 99988654321100 0001111
Q ss_pred --------cCCCCeEEEEeccCCCcccccccccccCchhh---HH---HHHHHHHHHHHHHcCCCceEEEEcCCCchHHH
Q 003985 357 --------SGTEHTHILRVPFRSEKGILRQWISRFDVWPY---LE---TFTEDVGSEITAELQGFPDFIIGNYSDGNLVA 422 (781)
Q Consensus 357 --------~~~~~~~I~rvP~~~~~~~~~~~isr~~i~~y---l~---~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva 422 (781)
...+|+++++++.... ..+..++.+ .. .|+..+...+. .+..+|||||+|+|.+++++
T Consensus 62 ~~~~~~~~~~~~gv~v~~v~~~~~-------~~~~~~y~~~d~~~r~~~f~~~~~~~~~-~~~~~pDiiH~h~w~~~~~~ 133 (466)
T PRK00654 62 LFTVLFGHLEGDGVPVYLIDAPHL-------FDRPSGYGYPDNGERFAFFSWAAAEFAE-GLDPRPDIVHAHDWHTGLIP 133 (466)
T ss_pred eEEEEEEeEEcCCceEEEEeCHHH-------cCCCCCCCCcChHHHHHHHHHHHHHHHH-hcCCCCceEEECCcHHHHHH
Confidence 1124678888765321 112222222 11 24444444443 33569999999999999999
Q ss_pred HHHHHHc-----CCcEEEEecCCccccCCCCh------hhHhhh-hccccchhhhhHHHHHHhhCCEEEecCHHHHhhcc
Q 003985 423 SLLAYKM-----GITQCTIAHALEKTKYPDSD------IYWKKF-DEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTK 490 (781)
Q Consensus 423 ~llar~~-----gvp~v~t~H~l~~~k~~~s~------~~~k~~-~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k 490 (781)
.++++.. ++|+|+|+|++......... +.+..+ .....+...+.....+++.||.|||+|+..++.+.
T Consensus 134 ~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~ 213 (466)
T PRK00654 134 ALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREIT 213 (466)
T ss_pred HHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhc
Confidence 9888763 79999999998643211100 000000 00111111233445678999999999988765332
Q ss_pred ccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhh-cchhhhccCccccccccCCCCC
Q 003985 491 NTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH-GSIEQLLFDPEQNDEHVGTLSD 569 (781)
Q Consensus 491 ~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~-~~i~~~l~~~~~~~~~~g~l~~ 569 (781)
+. + ..+.+.+.+ .....|+.+|+||+|.+.|.|.++..-. ..+. ..++.....+...++++|+. +
T Consensus 214 ~~---~---~~~gl~~~~------~~~~~ki~vI~NGid~~~~~p~~~~~~~-~~~~~~~~~~k~~~k~~l~~~~gl~-~ 279 (466)
T PRK00654 214 TP---E---FGYGLEGLL------RARSGKLSGILNGIDYDIWNPETDPLLA-ANYSADDLEGKAENKRALQERFGLP-D 279 (466)
T ss_pred cc---c---CCcChHHHH------HhcccCceEecCCCCccccCCccCcccc-cccChhhhhchHHHHHHHHHHhCCC-C
Confidence 21 0 000111000 1125689999999999999885431100 0000 00000000011223557774 3
Q ss_pred CCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE-ecc
Q 003985 570 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW-IAA 648 (781)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~f-lG~ 648 (781)
++.++|+++||+.+.||++.|++|++++.+. +++|+|+|+|+. .+.+.+++++++++ +++.+ .|+
T Consensus 280 ~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~~~lvivG~g~~----------~~~~~l~~l~~~~~--~~v~~~~g~ 345 (466)
T PRK00654 280 DDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--GGQLVLLGTGDP----------ELEEAFRALAARYP--GKVGVQIGY 345 (466)
T ss_pred CCCcEEEEeeccccccChHHHHHHHHHHHhc--CCEEEEEecCcH----------HHHHHHHHHHHHCC--CcEEEEEeC
Confidence 4688999999999999999999999998763 799999999854 34567888888886 45665 552
Q ss_pred ccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC------CeEEEECCCCHHHHH
Q 003985 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG------ASGFHIDPYHPDQAA 722 (781)
Q Consensus 649 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg------~~G~lv~p~d~e~lA 722 (781)
+.+.+..+++ ++|++|+||.+|+||++++|||+||+|+|+|++||+.|+|.++ .+|++++|+|+++++
T Consensus 346 -----~~~~~~~~~~-~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la 419 (466)
T PRK00654 346 -----DEALAHRIYA-GADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLL 419 (466)
T ss_pred -----CHHHHHHHHh-hCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHH
Confidence 3344567778 5999999999999999999999999999999999999999988 899999999999999
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003985 723 ELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 723 ~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll~ 770 (781)
++|.++++ +..+++.|+++++++++ ++|||+++ ++.|++++.
T Consensus 420 ~~i~~~l~-~~~~~~~~~~~~~~~~~---~~fsw~~~--a~~~~~lY~ 461 (466)
T PRK00654 420 RALRRALE-LYRQPPLWRALQRQAMA---QDFSWDKS--AEEYLELYR 461 (466)
T ss_pred HHHHHHHH-HhcCHHHHHHHHHHHhc---cCCChHHH--HHHHHHHHH
Confidence 99998763 23477889999888853 78999775 355555554
No 9
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=7.7e-41 Score=370.62 Aligned_cols=392 Identities=32% Similarity=0.518 Sum_probs=298.0
Q ss_pred EEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCC
Q 003985 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+|++.|++|.. --|.|+.||.++++. +|++.|+++||+|+ |+|...+..... .....
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~~-------~~~~~ 59 (398)
T cd03800 1 RIALISLHGSPLA--QPGGADTGGQNVYVL--------ELARALARLGHEVD----IFTRRIDDALPP-------IVELA 59 (398)
T ss_pred CeEEEeccccccc--cCCCCCCCceeehHH--------HHHHHHhccCceEE----EEEecCCcccCC-------ccccc
Confidence 6899999976532 135589999999999 77777899999999 998664332111 01122
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003985 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (781)
Q Consensus 360 ~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~ 439 (781)
.++.+++++...... .++..+++++..|...+.+.+... ..+||+||+|++..++++..+++..++|+|++.|+
T Consensus 60 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 133 (398)
T cd03800 60 PGVRVVRVPAGPAEY-----LPKEELWPYLDEFADDLLRFLRRE-GGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHS 133 (398)
T ss_pred cceEEEecccccccC-----CChhhcchhHHHHHHHHHHHHHhc-CCCccEEEEecCccchHHHHHHhhcCCceEEEeec
Confidence 367888887654321 233345666666666666666543 23899999999888888899999999999999998
Q ss_pred CccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003985 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (781)
Q Consensus 440 l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~ 519 (781)
+...........+. +........+..+++.||.++++|......+... | +. ...
T Consensus 134 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~---~----------------~~--~~~ 187 (398)
T cd03800 134 LGAVKRRHLGAADT-----YEPARRIEAEERLLRAADRVIASTPQEAEELYSL---Y----------------GA--YPR 187 (398)
T ss_pred ccccCCcccccccc-----cchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH---c----------------cc--ccc
Confidence 76543222111111 1122233456678999999999998765422211 0 11 144
Q ss_pred ceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhc
Q 003985 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (781)
Q Consensus 520 k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~ 599 (781)
++.+||||+|.+.|.+........ ..++. ..++++|+++||+++.||++.+++++.++.+
T Consensus 188 ~~~vi~ng~~~~~~~~~~~~~~~~------------------~~~~~--~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~ 247 (398)
T cd03800 188 RIRVVPPGVDLERFTPYGRAEARR------------------ARLLR--DPDKPRILAVGRLDPRKGIDTLIRAYAELPE 247 (398)
T ss_pred ccEEECCCCCccceecccchhhHH------------------Hhhcc--CCCCcEEEEEcccccccCHHHHHHHHHHHHH
Confidence 689999999998876654322211 11233 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCc
Q 003985 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFG 679 (781)
Q Consensus 600 ~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fG 679 (781)
..++++|+++|++.... .......++.+++++++.++|.|+| .++.+++..+++. +|++++||..|+||
T Consensus 248 ~~~~~~l~i~G~~~~~~------~~~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adi~l~ps~~e~~~ 316 (398)
T cd03800 248 LRERANLVIVGGPRDDI------LAMDEEELRELARELGVIDRVDFPG----RVSREDLPALYRA-ADVFVNPALYEPFG 316 (398)
T ss_pred hCCCeEEEEEECCCCcc------hhhhhHHHHHHHHhcCCCceEEEec----cCCHHHHHHHHHh-CCEEEecccccccC
Confidence 78899999999987621 1122345778888999999999999 6778899999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003985 680 LTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 680 ltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~ 759 (781)
++++|||+||+|||+|+.||..|+++++++|++++++|+++++++|.+++ .|++.++++++++++.+.++|||+.+
T Consensus 317 ~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~~~s~~~~ 392 (398)
T cd03800 317 LTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLL----TDPALRRRLSRAGLRRARARYTWERV 392 (398)
T ss_pred cHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 99999999999999999999999999999999999999999999998887 89999999999999999999999764
No 10
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=9e-41 Score=383.15 Aligned_cols=434 Identities=18% Similarity=0.182 Sum_probs=291.9
Q ss_pred eEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCc-----ce
Q 003985 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQ-----RL 353 (781)
Q Consensus 279 ~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~-----~~ 353 (781)
|||+++|...+|- -.+||+..++. .|+++|+++||+|. |+|+.++......... ..
T Consensus 1 m~i~~vs~E~~P~-------~k~GGl~~~v~--------~L~~aL~~~G~~v~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (473)
T TIGR02095 1 MRVLFVAAEMAPF-------AKTGGLADVVG--------ALPKALAALGHDVR----VLLPAYGCIEDEVDDQVKVVELV 61 (473)
T ss_pred CeEEEEEeccccc-------cCcCcHHHHHH--------HHHHHHHHcCCeEE----EEecCCcChhhhhccCeEEEEEE
Confidence 7999999987752 24899999999 77777899999999 9998866432110000 00
Q ss_pred --------ee----ecCCCCeEEEEeccCCC---cc-cccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCC
Q 003985 354 --------ER----VSGTEHTHILRVPFRSE---KG-ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSD 417 (781)
Q Consensus 354 --------e~----v~~~~~~~I~rvP~~~~---~~-~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~ 417 (781)
.. ....+++.++++..... .+ +... +..+.......|+..+...+.. ...+|||||+|.|.
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~v~~~~i~~~~~~~r~~~~y~~--~~~d~~~r~~~f~~a~~~~~~~-~~~~~DiiH~hdw~ 138 (473)
T TIGR02095 62 DLSVGPRTLYVKVFEGVVEGVPVYFIDNPSLFDRPGGIYGD--DYPDNAERFAFFSRAAAELLSG-LGWQPDVVHAHDWH 138 (473)
T ss_pred EEeecCceeEEEEEEEEECCceEEEEECHHHcCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHh-cCCCCCEEEECCcH
Confidence 00 01123567777643320 00 0000 0011111223455555554443 35689999999999
Q ss_pred chHHHHHHHHHcC---CcEEEEecCCccccCCCC-hhhH-----hhhh-ccccchhhhhHHHHHHhhCCEEEecCHHHHh
Q 003985 418 GNLVASLLAYKMG---ITQCTIAHALEKTKYPDS-DIYW-----KKFD-EKYHFSCQFTADLIAMNNADFIITSTYQEIA 487 (781)
Q Consensus 418 ~~lva~llar~~g---vp~v~t~H~l~~~k~~~s-~~~~-----k~~~-~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~ 487 (781)
+++++.++++..+ +|+|+|+|++........ .+.+ ..+. ..+.+...+.....+++.||.|+|+|+..++
T Consensus 139 ~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ 218 (473)
T TIGR02095 139 TALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAR 218 (473)
T ss_pred HHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHH
Confidence 9999999988876 999999999864332111 1110 0000 1111111233456689999999999997765
Q ss_pred hccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhh-cchhhhccCccccccccCC
Q 003985 488 GTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH-GSIEQLLFDPEQNDEHVGT 566 (781)
Q Consensus 488 ~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~-~~i~~~l~~~~~~~~~~g~ 566 (781)
.+.... + .+.+.+.+ .....++.+|+||+|.+.|.|..+..-.. ... ...+.....+...++++|+
T Consensus 219 ei~~~~--~----~~~l~~~l------~~~~~ki~~I~NGid~~~~~p~~~~~~~~-~~~~~~~~~k~~~k~~l~~~~gl 285 (473)
T TIGR02095 219 EILTPE--F----GYGLDGVL------KARSGKLRGILNGIDTEVWNPATDPYLKA-NYSADDLAGKAENKEALQEELGL 285 (473)
T ss_pred HhcCCc--C----CccchhHH------HhcCCCeEEEeCCCCccccCCCCCccccc-CcCccchhhhhhhHHHHHHHcCC
Confidence 332210 0 01111100 11256999999999999998754311000 000 0000000011123356787
Q ss_pred CCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003985 567 LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (781)
Q Consensus 567 l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~fl 646 (781)
..++++++|+++||+.+.||++.+++|+.++.+. +++|+|+|+|.. ...+.+++++++++ +++.+.
T Consensus 286 ~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~----------~~~~~l~~~~~~~~--~~v~~~ 351 (473)
T TIGR02095 286 PVDDDVPLFGVISRLTQQKGVDLLLAALPELLEL--GGQLVVLGTGDP----------ELEEALRELAERYP--GNVRVI 351 (473)
T ss_pred CccCCCCEEEEEecCccccChHHHHHHHHHHHHc--CcEEEEECCCCH----------HHHHHHHHHHHHCC--CcEEEE
Confidence 5445889999999999999999999999998753 599999999853 34567778887764 578888
Q ss_pred ccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC------CeEEEECCCCHHH
Q 003985 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG------ASGFHIDPYHPDQ 720 (781)
Q Consensus 647 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg------~~G~lv~p~d~e~ 720 (781)
+ ..+.+++..+++ ++|++|+||.+|+||++++|||+||+|||+|+.||..|+|.++ .+|+++++.|+++
T Consensus 352 ~----~~~~~~~~~~~~-~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~ 426 (473)
T TIGR02095 352 I----GYDEALAHLIYA-GADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGA 426 (473)
T ss_pred E----cCCHHHHHHHHH-hCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHH
Confidence 7 455667788888 5999999999999999999999999999999999999999998 8999999999999
Q ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHh
Q 003985 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINV 771 (781)
Q Consensus 721 lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll~~ 771 (781)
++++|.+++.....|++.|++|+++++ .++|||+++ ++.|.+++..
T Consensus 427 la~~i~~~l~~~~~~~~~~~~~~~~~~---~~~fsw~~~--a~~~~~~Y~~ 472 (473)
T TIGR02095 427 LLAALSRALRLYRQDPSLWEALQKNAM---SQDFSWDKS--AKQYVELYRS 472 (473)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHh---ccCCCcHHH--HHHHHHHHHh
Confidence 999999887544459999999999885 368999764 4677777653
No 11
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=1.4e-40 Score=374.27 Aligned_cols=395 Identities=13% Similarity=0.120 Sum_probs=280.7
Q ss_pred eEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCC---CccCcceee
Q 003985 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKG---TTCNQRLER 355 (781)
Q Consensus 279 ~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~---~~~~~~~e~ 355 (781)
|||+|+|.+++ |+.||.+.++. +|+++|.++||+|+ |+|+......+ ..+......
T Consensus 1 mkIlii~~~~~---------P~~~g~~~~~~--------~l~~~L~~~G~~V~----vit~~~~~~~~~~~~~~~~~~~~ 59 (412)
T PRK10307 1 MKILVYGINYA---------PELTGIGKYTG--------EMAEWLAARGHEVR----VITAPPYYPQWRVGEGYSAWRYR 59 (412)
T ss_pred CeEEEEecCCC---------CCccchhhhHH--------HHHHHHHHCCCeEE----EEecCCCCCCCCCCcccccccce
Confidence 79999998765 56899999998 77778899999999 99976211111 001111111
Q ss_pred ecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcE
Q 003985 356 VSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQ 433 (781)
Q Consensus 356 v~~~~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~--~lva~llar~~gvp~ 433 (781)
.....+++++|+|...... ...+. .+.. ...|.......+......+||+||+|.+.. ...+.+++++.++|+
T Consensus 60 ~~~~~~i~v~r~~~~~~~~--~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~ 134 (412)
T PRK10307 60 RESEGGVTVWRCPLYVPKQ--PSGLK--RLLH-LGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGART 134 (412)
T ss_pred eeecCCeEEEEccccCCCC--ccHHH--HHHH-HHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCE
Confidence 1123478999998753210 00000 1111 112333333333332236899999987653 466778889999999
Q ss_pred EEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeecc
Q 003985 434 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHG 513 (781)
Q Consensus 434 v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~g 513 (781)
++++|+.+............ ....++. ...+..+++.||.||++|....+..++ .|
T Consensus 135 v~~~~d~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~ad~ii~~S~~~~~~~~~--------------------~~ 190 (412)
T PRK10307 135 WLHIQDYEVDAAFGLGLLKG--GKVARLA--TAFERSLLRRFDNVSTISRSMMNKARE--------------------KG 190 (412)
T ss_pred EEEeccCCHHHHHHhCCccC--cHHHHHH--HHHHHHHHhhCCEEEecCHHHHHHHHH--------------------cC
Confidence 99999865321100000000 0000111 124667889999999999987653211 13
Q ss_pred CCCCCCceEEecCCCcCCCCCCCcHHH-HHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHH
Q 003985 514 IDVFDPKFNIVSPGADMDIYFPYSEKQ-KRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVE 592 (781)
Q Consensus 514 i~~f~~k~~VIpnGvD~~~f~p~~~~~-~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~Lie 592 (781)
++ ..++.+||||+|.+.|.+..... ... ++.+|+ ++++++|+|+||+.+.||++.|++
T Consensus 191 ~~--~~~i~vi~ngvd~~~~~~~~~~~~~~~-----------------~~~~~~--~~~~~~i~~~G~l~~~kg~~~li~ 249 (412)
T PRK10307 191 VA--AEKVIFFPNWSEVARFQPVADADVDAL-----------------RAQLGL--PDGKKIVLYSGNIGEKQGLELVID 249 (412)
T ss_pred CC--cccEEEECCCcCHhhcCCCCccchHHH-----------------HHHcCC--CCCCEEEEEcCccccccCHHHHHH
Confidence 33 56899999999998887653211 111 133565 566789999999999999999999
Q ss_pred HHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEc
Q 003985 593 CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQP 672 (781)
Q Consensus 593 A~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~P 672 (781)
|++++.+ .++++|+|+|+|+. .+.++++++++++. +|+|+| .++.+++..+++. +|++|+|
T Consensus 250 a~~~l~~-~~~~~l~ivG~g~~------------~~~l~~~~~~~~l~-~v~f~G----~~~~~~~~~~~~~-aDi~v~p 310 (412)
T PRK10307 250 AARRLRD-RPDLIFVICGQGGG------------KARLEKMAQCRGLP-NVHFLP----LQPYDRLPALLKM-ADCHLLP 310 (412)
T ss_pred HHHHhcc-CCCeEEEEECCChh------------HHHHHHHHHHcCCC-ceEEeC----CCCHHHHHHHHHh-cCEeEEe
Confidence 9998854 57899999999976 67788899999996 799999 5677899999995 9999999
Q ss_pred CCCCC----CcHHHHHHHHcCCcEEEcCccc--cccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 003985 673 AFYEA----FGLTVVEAMTCGLPTFATCHGG--PAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGG 746 (781)
Q Consensus 673 S~~E~----fGltvlEAMa~GlPVIaT~~GG--~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a 746 (781)
|..|+ +|.+++|||+||+|||+|+.|| ..|++. ++|++++++|+++++++|.+++ +|++.+++|+++|
T Consensus 311 s~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a 384 (412)
T PRK10307 311 QKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALA----RQALLRPKLGTVA 384 (412)
T ss_pred eccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHH
Confidence 99998 5777899999999999998876 458886 5899999999999999998877 8999999999999
Q ss_pred HHHHHHhcCcchhhhccchHHHHHh
Q 003985 747 LKRIYERLVVSSDGIVDPSPFVINV 771 (781)
Q Consensus 747 ~~~v~~~ysw~~~~il~~ye~ll~~ 771 (781)
++++.++|||+. +++.|.++++.
T Consensus 385 ~~~~~~~fs~~~--~~~~~~~~~~~ 407 (412)
T PRK10307 385 REYAERTLDKEN--VLRQFIADIRG 407 (412)
T ss_pred HHHHHHHcCHHH--HHHHHHHHHHH
Confidence 999999999966 45556665554
No 12
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=8e-40 Score=386.07 Aligned_cols=457 Identities=15% Similarity=0.150 Sum_probs=300.9
Q ss_pred HHhhcCCCcccHhhhhc--CC--CCceEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceee
Q 003985 257 LDILQAPDPSTLEKFLG--RL--PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISP 332 (781)
Q Consensus 257 ~~~~~~p~~~~~~~f~~--r~--p~~~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~ 332 (781)
.++.+.+|...+..|+. +. .+-|||++||.-..| .-.+||..-++- .|.++|+++||+|.
T Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~mkILfVasE~aP-------~aKtGGLaDVv~--------sLPkAL~~~GhdV~- 519 (977)
T PLN02939 456 LSCKGKNEREAVENFLKLTLSGTSSGLHIVHIAAEMAP-------VAKVGGLADVVS--------GLGKALQKKGHLVE- 519 (977)
T ss_pred HHHhcCchHHHHHHHHHhccCCCCCCCEEEEEEccccc-------ccccccHHHHHH--------HHHHHHHHcCCeEE-
Confidence 45556777776666654 22 245999999987765 245899988888 67777899999999
Q ss_pred ceeEEEccCCCCCCCccC-c-----cee-eecC-----------CCCeEEEEeccCCCcccccccccccCchh------h
Q 003985 333 KILIVTRLIPDAKGTTCN-Q-----RLE-RVSG-----------TEHTHILRVPFRSEKGILRQWISRFDVWP------Y 388 (781)
Q Consensus 333 ~v~VlT~~~p~~~~~~~~-~-----~~e-~v~~-----------~~~~~I~rvP~~~~~~~~~~~isr~~i~~------y 388 (781)
|+++.++........ . ... ...+ .+|+.++.+...... .+..|..++. .
T Consensus 520 ---VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~~----~fF~R~~iYg~~Dn~~R 592 (977)
T PLN02939 520 ---IVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPS----KFFWRAQYYGEHDDFKR 592 (977)
T ss_pred ---EEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEEEEECCeeEEEEecCCch----hccCCCCCCCCccHHHH
Confidence 999887643200000 0 000 0000 123445544211000 0112222331 1
Q ss_pred HHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH------cCCcEEEEecCCccccCCC-Chh-----hHhhhh
Q 003985 389 LETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK------MGITQCTIAHALEKTKYPD-SDI-----YWKKFD 456 (781)
Q Consensus 389 l~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~------~gvp~v~t~H~l~~~k~~~-s~~-----~~k~~~ 456 (781)
+..|+..++..+.. .+.+|||||+|.|.+++++.++.+. .+++.|+|+|++..+.... ..+ .+..+.
T Consensus 593 F~~FsrAaLe~~~~-~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~ 671 (977)
T PLN02939 593 FSYFSRAALELLYQ-SGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLD 671 (977)
T ss_pred HHHHHHHHHHHHHh-cCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHcc
Confidence 22344444444433 3579999999999999876555442 3589999999986544221 111 111110
Q ss_pred ---c-cccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCC
Q 003985 457 ---E-KYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDI 532 (781)
Q Consensus 457 ---~-~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~ 532 (781)
. .++|..++..-+..+..||.|+|+|+..+..+... + ...|.+. +.....|+.+|+||+|.+.
T Consensus 672 ~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te---~----G~GL~~~------L~~~~~Kl~gIlNGID~e~ 738 (977)
T PLN02939 672 RPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSE---G----GRGLQDT------LKFHSKKFVGILNGIDTDT 738 (977)
T ss_pred ChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHH---h----ccchHHH------hccccCCceEEecceehhh
Confidence 0 00111222223345667999999999887654321 0 1111111 1223679999999999999
Q ss_pred CCCCcHHHHHHhhhhcchhhhccCccccccccCCCCC-CCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeC
Q 003985 533 YFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSD-RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAG 611 (781)
Q Consensus 533 f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~-~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~ 611 (781)
|.|.++.--...--...++....++...++++|+..+ ++.|+|+++||+.+.||++.+++|+.++.+ ++++|+|+|+
T Consensus 739 wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dvqLVIvGd 816 (977)
T PLN02939 739 WNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGGQFVLLGS 816 (977)
T ss_pred cCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCCEEEEEeC
Confidence 9887532100000000000111112234466888532 467999999999999999999999998765 4789999999
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCc
Q 003985 612 YIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP 691 (781)
Q Consensus 612 g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP 691 (781)
|+.+ .+.+.++++++++++.++|+|+| ..+......+|+ ++|+||+||.+|+||++++|||+||+|
T Consensus 817 Gp~~---------~~e~eL~~La~~l~l~drV~FlG----~~de~lah~IYA-aADIFLmPSr~EPfGLvqLEAMAyGtP 882 (977)
T PLN02939 817 SPVP---------HIQREFEGIADQFQSNNNIRLIL----KYDEALSHSIYA-ASDMFIIPSMFEPCGLTQMIAMRYGSV 882 (977)
T ss_pred CCcH---------HHHHHHHHHHHHcCCCCeEEEEe----ccCHHHHHHHHH-hCCEEEECCCccCCcHHHHHHHHCCCC
Confidence 9751 34567889999999999999999 455556678888 599999999999999999999999999
Q ss_pred EEEcCcccccccccc---------CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh--h
Q 003985 692 TFATCHGGPAEIIEH---------GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD--G 760 (781)
Q Consensus 692 VIaT~~GG~~EiI~d---------g~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~--~ 760 (781)
+|++++||+.|+|.+ +.+||+++++|+++++++|.+++..+..||+.|++|+++++ .+.|||+.+ .
T Consensus 883 PVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am---~~dFSWe~~A~q 959 (977)
T PLN02939 883 PIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDM---NIDFSWDSSASQ 959 (977)
T ss_pred EEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHH---HhcCCHHHHHHH
Confidence 999999999999875 57999999999999999999888666678999999998764 478999775 3
Q ss_pred hccchHHHH
Q 003985 761 IVDPSPFVI 769 (781)
Q Consensus 761 il~~ye~ll 769 (781)
+.+.|++++
T Consensus 960 YeeLY~~ll 968 (977)
T PLN02939 960 YEELYQRAV 968 (977)
T ss_pred HHHHHHHHH
Confidence 444444444
No 13
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=1.8e-40 Score=372.03 Aligned_cols=366 Identities=15% Similarity=0.157 Sum_probs=269.8
Q ss_pred EEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCC
Q 003985 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++++..+ |..||.++++. +|++.|+++||+|+ |+|...+...+. + ...
T Consensus 1 kI~~v~~~~~---------p~~GG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~------~--~~~ 51 (398)
T cd03796 1 RICMVSDFFY---------PNLGGVETHIY--------QLSQCLIKRGHKVV----VITHAYGNRVGI------R--YLT 51 (398)
T ss_pred CeeEEeeccc---------cccccHHHHHH--------HHHHHHHHcCCeeE----EEeccCCcCCCc------c--ccc
Confidence 7999997665 56899999999 77778899999999 998764322111 0 112
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCch--HHHHHHHHHcCCcEEEEe
Q 003985 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGN--LVASLLAYKMGITQCTIA 437 (781)
Q Consensus 360 ~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~--lva~llar~~gvp~v~t~ 437 (781)
.++.++++|...... ...+. ....+...+.+.+. +.+|||||+|...+. ..+.++++..++|+|++.
T Consensus 52 ~~i~v~~~p~~~~~~-------~~~~~-~~~~~~~~l~~~~~---~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~ 120 (398)
T cd03796 52 NGLKVYYLPFVVFYN-------QSTLP-TFFGTFPLLRNILI---RERITIVHGHQAFSALAHEALLHARTMGLKTVFTD 120 (398)
T ss_pred CceeEEEecceeccC-------Ccccc-chhhhHHHHHHHHH---hcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEe
Confidence 357888888754211 00011 11112222223333 348999999987653 346777888999999999
Q ss_pred cCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003985 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (781)
Q Consensus 438 H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f 517 (781)
|+..... +..... +. ......++.+|.+|++|....+... ...+++
T Consensus 121 h~~~~~~----~~~~~~----~~-----~~~~~~~~~~d~ii~~s~~~~~~~~-------------------~~~~~~-- 166 (398)
T cd03796 121 HSLFGFA----DASSIH----TN-----KLLRFSLADVDHVICVSHTSKENTV-------------------LRASLD-- 166 (398)
T ss_pred ccccccc----chhhHH----hh-----HHHHHhhccCCEEEEecHhHhhHHH-------------------HHhCCC--
Confidence 9854211 000000 00 1123467899999999987643100 001222
Q ss_pred CCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHh
Q 003985 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (781)
Q Consensus 518 ~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l 597 (781)
..++.+||||+|.+.|.+.... .++++++|+++||+.+.||++.|++|+.++
T Consensus 167 ~~k~~vi~ngvd~~~f~~~~~~----------------------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 167 PERVSVIPNAVDSSDFTPDPSK----------------------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred hhhEEEEcCccCHHHcCCCccc----------------------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 5689999999998877654321 035678999999999999999999999999
Q ss_pred hccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCC
Q 003985 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (781)
Q Consensus 598 ~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 677 (781)
.+..++++|+|+|+|+. .+.++++++++++.++|.|+| .++.+++..+++. +|++|+||..|+
T Consensus 219 ~~~~~~~~l~i~G~g~~------------~~~l~~~~~~~~l~~~v~~~G----~~~~~~~~~~l~~-ad~~v~pS~~E~ 281 (398)
T cd03796 219 CKKHPNVRFIIGGDGPK------------RILLEEMREKYNLQDRVELLG----AVPHERVRDVLVQ-GHIFLNTSLTEA 281 (398)
T ss_pred HhhCCCEEEEEEeCCch------------HHHHHHHHHHhCCCCeEEEeC----CCCHHHHHHHHHh-CCEEEeCChhhc
Confidence 88888999999999865 567889999999999999999 6677899999995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcc
Q 003985 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVS 757 (781)
Q Consensus 678 fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~ 757 (781)
||++++|||+||+|||+|+.||..|++.++. +++++ .|+++++++|.+++ .++.....+++++++++.++|||+
T Consensus 282 ~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~-~~~~~-~~~~~l~~~l~~~l----~~~~~~~~~~~~~~~~~~~~fs~~ 355 (398)
T cd03796 282 FCIAIVEAASCGLLVVSTRVGGIPEVLPPDM-ILLAE-PDVESIVRKLEEAI----SILRTGKHDPWSFHNRVKKMYSWE 355 (398)
T ss_pred cCHHHHHHHHcCCCEEECCCCCchhheeCCc-eeecC-CCHHHHHHHHHHHH----hChhhhhhHHHHHHHHHHhhCCHH
Confidence 9999999999999999999999999998764 44454 48999999999887 566666678899999999999998
Q ss_pred hh--hhccchHHHHH
Q 003985 758 SD--GIVDPSPFVIN 770 (781)
Q Consensus 758 ~~--~il~~ye~ll~ 770 (781)
.+ .+++.|++++.
T Consensus 356 ~~~~~~~~~y~~l~~ 370 (398)
T cd03796 356 DVAKRTEKVYDRILQ 370 (398)
T ss_pred HHHHHHHHHHHHHhc
Confidence 76 55555555543
No 14
>PLN02316 synthase/transferase
Probab=100.00 E-value=1.8e-39 Score=389.57 Aligned_cols=405 Identities=14% Similarity=0.067 Sum_probs=279.0
Q ss_pred ceEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCcc-Ccce-ee
Q 003985 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTC-NQRL-ER 355 (781)
Q Consensus 278 ~~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~-~~~~-e~ 355 (781)
+|||++||.+..|- -.+||+..+|. .|+++|+++||+|. |+|+.++....... .... ..
T Consensus 587 pM~Il~VSsE~~P~-------aKvGGLgDVV~--------sLp~ALa~~Gh~V~----VitP~Y~~i~~~~~~~~~~~~~ 647 (1036)
T PLN02316 587 PMHIVHIAVEMAPI-------AKVGGLGDVVT--------SLSRAVQDLNHNVD----IILPKYDCLNLSHVKDLHYQRS 647 (1036)
T ss_pred CcEEEEEEcccCCC-------CCcCcHHHHHH--------HHHHHHHHcCCEEE----EEecCCcccchhhcccceEEEE
Confidence 59999999998852 34899999999 77777899999999 99998764210000 0000 00
Q ss_pred e-----------cCCCCeEEEEeccCCCcccccccccccCch------hhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc
Q 003985 356 V-----------SGTEHTHILRVPFRSEKGILRQWISRFDVW------PYLETFTEDVGSEITAELQGFPDFIIGNYSDG 418 (781)
Q Consensus 356 v-----------~~~~~~~I~rvP~~~~~~~~~~~isr~~i~------~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~ 418 (781)
+ ...+++.++++.... + +..+..++ ..+..|+..++..+.. ...+|||||+|+|.+
T Consensus 648 ~~~~~~~~~v~~~~~~GV~vyfl~~~~--~----~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~~-~~~~PDIIHaHDW~t 720 (1036)
T PLN02316 648 YSWGGTEIKVWFGKVEGLSVYFLEPQN--G----MFWAGCVYGCRNDGERFGFFCHAALEFLLQ-SGFHPDIIHCHDWSS 720 (1036)
T ss_pred eccCCEEEEEEEEEECCcEEEEEeccc--c----ccCCCCCCCchhHHHHHHHHHHHHHHHHHh-cCCCCCEEEECCChH
Confidence 0 011245555554221 1 11111122 1233444445544433 356899999999999
Q ss_pred hHHHHHHHHHc------CCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhcccc
Q 003985 419 NLVASLLAYKM------GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNT 492 (781)
Q Consensus 419 ~lva~llar~~------gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~ 492 (781)
++++.++++.. ++|+|+|+|++.... ++ ...++..||.|+|+|+..+..+...
T Consensus 721 alva~llk~~~~~~~~~~~p~V~TiHnl~~~~---------------n~------lk~~l~~AD~ViTVS~tya~EI~~~ 779 (1036)
T PLN02316 721 APVAWLFKDHYAHYGLSKARVVFTIHNLEFGA---------------NH------IGKAMAYADKATTVSPTYSREVSGN 779 (1036)
T ss_pred HHHHHHHHHhhhhhccCCCCEEEEeCCcccch---------------hH------HHHHHHHCCEEEeCCHHHHHHHHhc
Confidence 99998887753 589999999864211 00 1246789999999999876532211
Q ss_pred ccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhc-c-hhhhccCccccccccCCCCCC
Q 003985 493 VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHG-S-IEQLLFDPEQNDEHVGTLSDR 570 (781)
Q Consensus 493 v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~-~-i~~~l~~~~~~~~~~g~l~~~ 570 (781)
.++.....|+.+|+||||.+.|.|.++...... ... . .+-........++.+|+. ++
T Consensus 780 -------------------~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~-y~~~~~~~gK~~~k~~Lr~~lGL~-~~ 838 (1036)
T PLN02316 780 -------------------SAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVP-YTSENVVEGKRAAKEALQQRLGLK-QA 838 (1036)
T ss_pred -------------------cCcccccCCEEEEECCccccccCCccccccccc-CCchhhhhhhhhhHHHHHHHhCCC-cc
Confidence 012212469999999999999887643100000 000 0 000000011223567874 24
Q ss_pred CCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC--CCcEEEecc
Q 003985 571 SKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL--DGQFRWIAA 648 (781)
Q Consensus 571 ~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L--~~~V~flG~ 648 (781)
+.|+|+++|||.+.||++.|++|+.++.+ .+++|+|+|+|+++ .+.+.++++++++++ +++|.|.|.
T Consensus 839 d~plVg~VGRL~~qKGvdlLi~Al~~ll~--~~~qlVIvG~Gpd~---------~~e~~l~~La~~Lg~~~~~rV~f~g~ 907 (1036)
T PLN02316 839 DLPLVGIITRLTHQKGIHLIKHAIWRTLE--RNGQVVLLGSAPDP---------RIQNDFVNLANQLHSSHHDRARLCLT 907 (1036)
T ss_pred cCeEEEEEeccccccCHHHHHHHHHHHhh--cCcEEEEEeCCCCH---------HHHHHHHHHHHHhCccCCCeEEEEec
Confidence 68999999999999999999999999865 36999999999761 345678889998876 578999883
Q ss_pred ccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC-------------CeEEEECC
Q 003985 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG-------------ASGFHIDP 715 (781)
Q Consensus 649 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg-------------~~G~lv~p 715 (781)
.+......+|+ ++|+||+||++|+||++.+|||+||+|+|++++||++|+|.++ .+||++++
T Consensus 908 ----~de~lah~iya-aADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~ 982 (1036)
T PLN02316 908 ----YDEPLSHLIYA-GADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDG 982 (1036)
T ss_pred ----CCHHHHHHHHH-hCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCC
Confidence 32222346777 5999999999999999999999999999999999999999884 68999999
Q ss_pred CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHh
Q 003985 716 YHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINV 771 (781)
Q Consensus 716 ~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll~~ 771 (781)
.|+++++.+|.+++... ++....+++.+++.+.+.|||+.+ ++.|++++..
T Consensus 983 ~d~~aLa~AL~raL~~~---~~~~~~~~~~~r~~m~~dFSW~~~--A~~Y~~LY~~ 1033 (1036)
T PLN02316 983 ADAAGVDYALNRAISAW---YDGRDWFNSLCKRVMEQDWSWNRP--ALDYMELYHS 1033 (1036)
T ss_pred CCHHHHHHHHHHHHhhh---hhhHHHHHHHHHHHHHhhCCHHHH--HHHHHHHHHH
Confidence 99999999999888321 344556778888888899999765 4667776643
No 15
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=3.1e-39 Score=371.03 Aligned_cols=439 Identities=16% Similarity=0.174 Sum_probs=287.8
Q ss_pred CCceEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCc--cCc--
Q 003985 276 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTT--CNQ-- 351 (781)
Q Consensus 276 p~~~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~--~~~-- 351 (781)
|| |||+++|.-..| .-.|||..=.+- .|.++|+++||+|. |+++.+..-.... ...
T Consensus 4 ~~-~~il~v~~E~~p-------~~k~Ggl~dv~~--------~Lp~al~~~g~~v~----v~~P~y~~~~~~~~~~~~~~ 63 (489)
T PRK14098 4 RN-FKVLYVSGEVSP-------FVRVSALADFMA--------SFPQALEEEGFEAR----IMMPKYGTINDRKFRLHDVL 63 (489)
T ss_pred CC-cEEEEEeecchh-------hcccchHHHHHH--------HHHHHHHHCCCeEE----EEcCCCCchhhhhhccccce
Confidence 55 999999987765 246899776666 56777899999999 9988765432110 000
Q ss_pred ceeee--cCCCCeEEEEec--cCCCcc---c-c--cccccccCch----------hhHH---HHHHHHHHHHHHHcCCCc
Q 003985 352 RLERV--SGTEHTHILRVP--FRSEKG---I-L--RQWISRFDVW----------PYLE---TFTEDVGSEITAELQGFP 408 (781)
Q Consensus 352 ~~e~v--~~~~~~~I~rvP--~~~~~~---~-~--~~~isr~~i~----------~yl~---~f~~~~~~~i~~~l~~~p 408 (781)
....+ .-.....+.++- ..+..+ | + ..+..|..++ .-.+ .|...+...+. ....+|
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~-~~~~~p 142 (489)
T PRK14098 64 RLSDIEVPLKEKTDLLHVKVTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQ-RLGWKP 142 (489)
T ss_pred EEEEEEEeecCeeEEEEEEEecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHH-hcCCCC
Confidence 01110 000011222110 000000 0 0 0111222222 1122 33334444443 235689
Q ss_pred eEEEEcCCCchHHHHHHHHHc-------CCcEEEEecCCccccCCCChhh-----HhhhhccccchhhhhHHHHHHhhCC
Q 003985 409 DFIIGNYSDGNLVASLLAYKM-------GITQCTIAHALEKTKYPDSDIY-----WKKFDEKYHFSCQFTADLIAMNNAD 476 (781)
Q Consensus 409 DIIh~~~~~~~lva~llar~~-------gvp~v~t~H~l~~~k~~~s~~~-----~k~~~~~y~f~~~~~~e~~a~~~AD 476 (781)
||||+|+|.+++++.+++++. ++|+|+|+|++..+........ +........+...+...+.+++.||
T Consensus 143 DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad 222 (489)
T PRK14098 143 DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHAD 222 (489)
T ss_pred CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcC
Confidence 999999999999999888765 7999999999765432211111 0101010111112344566889999
Q ss_pred EEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhh-cchhhhcc
Q 003985 477 FIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH-GSIEQLLF 555 (781)
Q Consensus 477 ~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~-~~i~~~l~ 555 (781)
.|+|+|+..++.+.+.. ...+.+++..+ ....|+.+|+||+|.+.|.|.++..-+ ..+. ..++...-
T Consensus 223 ~VitVS~~~a~ei~~~~-----~~~~gl~~~l~------~~~~kl~~I~NGID~~~~~p~~d~~~~-~~~~~~~~~~k~~ 290 (489)
T PRK14098 223 LLTTTSPRYAEEIAGDG-----EEAFGLDKVLE------ERKMRLHGILNGIDTRQWNPSTDKLIK-KRYSIERLDGKLE 290 (489)
T ss_pred cceeeCHHHHHHhCcCC-----CCCcChHHHHH------hcCCCeeEEeCCccccccCCccccccc-ccCCcchhhhHHH
Confidence 99999998876443210 00112222111 115699999999999999886532100 0000 00000000
Q ss_pred CccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH
Q 003985 556 DPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 635 (781)
Q Consensus 556 ~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~ 635 (781)
++....+.+|++.++++++|+++||+.+.||++.|++|+.++.+ ++++|+|+|+|+. .+.+.++++++
T Consensus 291 ~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~--~~~~lvivG~G~~----------~~~~~l~~l~~ 358 (489)
T PRK14098 291 NKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE--LDIQLVICGSGDK----------EYEKRFQDFAE 358 (489)
T ss_pred HHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh--cCcEEEEEeCCCH----------HHHHHHHHHHH
Confidence 11122345788666788999999999999999999999999875 3799999999864 34678888888
Q ss_pred HcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc----CCeEE
Q 003985 636 TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH----GASGF 711 (781)
Q Consensus 636 el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~d----g~~G~ 711 (781)
++ .++|.|+| .++.+++..+++ ++|+||+||.+|+||++.+|||+||+|+|++++||..|+|.+ +.+|+
T Consensus 359 ~~--~~~V~~~g----~~~~~~~~~~~a-~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~ 431 (489)
T PRK14098 359 EH--PEQVSVQT----EFTDAFFHLAIA-GLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGF 431 (489)
T ss_pred HC--CCCEEEEE----ecCHHHHHHHHH-hCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCcee
Confidence 87 47899999 566778889999 599999999999999999999999999999999999998864 67999
Q ss_pred EECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHhc
Q 003985 712 HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINVI 772 (781)
Q Consensus 712 lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll~~~ 772 (781)
+++++|+++++++|.++++ +..|++.|+++++++. .+.|||+++ ++.|++++..+
T Consensus 432 l~~~~d~~~la~ai~~~l~-~~~~~~~~~~~~~~~~---~~~fsw~~~--a~~y~~lY~~~ 486 (489)
T PRK14098 432 IFHDYTPEALVAKLGEALA-LYHDEERWEELVLEAM---ERDFSWKNS--AEEYAQLYREL 486 (489)
T ss_pred EeCCCCHHHHHHHHHHHHH-HHcCHHHHHHHHHHHh---cCCCChHHH--HHHHHHHHHHH
Confidence 9999999999999988763 4478999999887664 478999765 45566666543
No 16
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=8.5e-39 Score=354.96 Aligned_cols=376 Identities=23% Similarity=0.290 Sum_probs=270.0
Q ss_pred eEEEEEccCcCCcccccCCCCC-cccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeec
Q 003985 279 FNVVILSPHGYFGQANVLGLPD-TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVS 357 (781)
Q Consensus 279 ~rI~ivS~hg~~~~~~vlg~p~-~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~ 357 (781)
|||++++...+ |+ .||.++++. +|+++|+++ |+|+ |+|..... .
T Consensus 1 mkI~~i~~~~~---------p~~~GG~~~~v~--------~l~~~l~~~-~~v~----v~~~~~~~-------------~ 45 (388)
T TIGR02149 1 MKVTVLTREYP---------PNVYGGAGVHVE--------ELTRELARL-MDVD----VRCFGDQR-------------F 45 (388)
T ss_pred CeeEEEecccC---------ccccccHhHHHH--------HHHHHHHHh-cCee----EEcCCCch-------------h
Confidence 79999987554 45 499999999 666667776 7777 66643211 0
Q ss_pred CCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEe
Q 003985 358 GTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIA 437 (781)
Q Consensus 358 ~~~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~v~t~ 437 (781)
...++.+.+++..... ......+..+..++. ......+||+||+|.+.+++.+.++++..++|++++.
T Consensus 46 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~---~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p~v~~~ 113 (388)
T TIGR02149 46 DSEGLTVKGYRPWSEL---------KEANKALGTFSVDLA---MANDPVDADVVHSHTWYTFLAGHLAKKLYDKPLVVTA 113 (388)
T ss_pred cCCCeEEEEecChhhc---------cchhhhhhhhhHHHH---HhhCCCCCCeEeecchhhhhHHHHHHHhcCCCEEEEe
Confidence 1235677766443210 111122222322221 1111347999999998887778877888899999999
Q ss_pred cCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003985 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (781)
Q Consensus 438 H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f 517 (781)
|++........ ......|.+.. ..+..+++.+|.||++|....+.+.+. | .|++
T Consensus 114 h~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~ad~vi~~S~~~~~~~~~~---~---------------~~~~-- 167 (388)
T TIGR02149 114 HSLEPLRPWKE----EQLGGGYKLSS--WAEKTAIEAADRVIAVSGGMREDILKY---Y---------------PDLD-- 167 (388)
T ss_pred ecccccccccc----cccccchhHHH--HHHHHHHhhCCEEEEccHHHHHHHHHH---c---------------CCCC--
Confidence 98754321100 00111122221 235678899999999998775532211 0 0222
Q ss_pred CCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHh
Q 003985 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (781)
Q Consensus 518 ~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l 597 (781)
..++.+||||+|.+.|.|......+ ..+|+ ++++++|+++||+.+.||++.|++|++++
T Consensus 168 ~~~i~vi~ng~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~Grl~~~Kg~~~li~a~~~l 226 (388)
T TIGR02149 168 PEKVHVIYNGIDTKEYKPDDGNVVL-------------------DRYGI--DRSRPYILFVGRITRQKGVPHLLDAVHYI 226 (388)
T ss_pred cceEEEecCCCChhhcCCCchHHHH-------------------HHhCC--CCCceEEEEEcccccccCHHHHHHHHHHH
Confidence 5689999999999888765432221 23555 56788999999999999999999999988
Q ss_pred hccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC-CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCC
Q 003985 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL-DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 676 (781)
Q Consensus 598 ~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L-~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E 676 (781)
. ++++++++|+|++ ..+..+.+++.+.+++. .++|.|++. .++.+++..+++. +|++|+||.+|
T Consensus 227 ~---~~~~l~i~g~g~~--------~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~~~~~~-aDv~v~ps~~e 291 (388)
T TIGR02149 227 P---KDVQVVLCAGAPD--------TPEVAEEVRQAVALLDRNRTGIIWINK---MLPKEELVELLSN-AEVFVCPSIYE 291 (388)
T ss_pred h---hcCcEEEEeCCCC--------cHHHHHHHHHHHHHhccccCceEEecC---CCCHHHHHHHHHh-CCEEEeCCccC
Confidence 5 4689999998865 11334667777777765 345887652 5778899999995 99999999999
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCH------HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 003985 677 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP------DQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (781)
Q Consensus 677 ~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~------e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v 750 (781)
+||++++|||+||+|||+|+.||..|++.++.+|++++++|+ ++++++|.+++ +|++.+++|++++++.+
T Consensus 292 ~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~ 367 (388)
T TIGR02149 292 PLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILL----ADPELAKKMGIAGRKRA 367 (388)
T ss_pred CCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998 88999998776 89999999999999999
Q ss_pred HHhcCcchhhhccchHHHH
Q 003985 751 YERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 751 ~~~ysw~~~~il~~ye~ll 769 (781)
.++|||+.+ ++.|.+++
T Consensus 368 ~~~~s~~~~--~~~~~~~y 384 (388)
T TIGR02149 368 EEEFSWGSI--AKKTVEMY 384 (388)
T ss_pred HHhCCHHHH--HHHHHHHH
Confidence 999999765 34454444
No 17
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=7.8e-39 Score=366.41 Aligned_cols=376 Identities=15% Similarity=0.189 Sum_probs=266.1
Q ss_pred CceEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeee
Q 003985 277 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (781)
Q Consensus 277 ~~~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v 356 (781)
+.|||++++ +.+| .+..||++.++. +|+++|.++||+|+ |+|...... +.
T Consensus 57 ~~mrI~~~~-~~~~-------~~~~gG~~~~~~--------~l~~~L~~~G~eV~----vlt~~~~~~---------~~- 106 (465)
T PLN02871 57 RPRRIALFV-EPSP-------FSYVSGYKNRFQ--------NFIRYLREMGDEVL----VVTTDEGVP---------QE- 106 (465)
T ss_pred CCceEEEEE-CCcC-------CcccccHHHHHH--------HHHHHHHHCCCeEE----EEecCCCCC---------cc-
Confidence 358999997 3321 246799999998 77778899999999 998653211 00
Q ss_pred cCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEE
Q 003985 357 SGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCT 435 (781)
Q Consensus 357 ~~~~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~-~lva~llar~~gvp~v~ 435 (781)
..++.+++++.... + +..... +.+ .+...+.+.+.+ .+|||||+|.... .+.+.++++..++|+|+
T Consensus 107 --~~g~~v~~~~~~~~-~----~~~~~~-~~~--~~~~~l~~~i~~---~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~ 173 (465)
T PLN02871 107 --FHGAKVIGSWSFPC-P----FYQKVP-LSL--ALSPRIISEVAR---FKPDLIHASSPGIMVFGALFYAKLLCVPLVM 173 (465)
T ss_pred --ccCceeeccCCcCC-c----cCCCce-eec--cCCHHHHHHHHh---CCCCEEEECCCchhHHHHHHHHHHhCCCEEE
Confidence 11344443322111 0 000000 000 011123333333 4899999998654 45566678889999999
Q ss_pred EecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCC
Q 003985 436 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 515 (781)
Q Consensus 436 t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~ 515 (781)
+.|+............+ + ++.. .......++.+|.|+++|....+.+.+. |.
T Consensus 174 ~~h~~~~~~~~~~~~~~--~---~~~~--~~~~r~~~~~ad~ii~~S~~~~~~l~~~--------------------~~- 225 (465)
T PLN02871 174 SYHTHVPVYIPRYTFSW--L---VKPM--WDIIRFLHRAADLTLVTSPALGKELEAA--------------------GV- 225 (465)
T ss_pred EEecCchhhhhcccchh--h---HHHH--HHHHHHHHhhCCEEEECCHHHHHHHHHc--------------------CC-
Confidence 99975432211111001 0 0000 1123457789999999998776522111 11
Q ss_pred CCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHH
Q 003985 516 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYG 595 (781)
Q Consensus 516 ~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~ 595 (781)
....++.+||||+|.+.|.|........ .++... .+++++|+|+||+.+.||++.++++++
T Consensus 226 ~~~~kv~vi~nGvd~~~f~p~~~~~~~~------------------~~~~~~-~~~~~~i~~vGrl~~~K~~~~li~a~~ 286 (465)
T PLN02871 226 TAANRIRVWNKGVDSESFHPRFRSEEMR------------------ARLSGG-EPEKPLIVYVGRLGAEKNLDFLKRVME 286 (465)
T ss_pred CCcCeEEEeCCccCccccCCccccHHHH------------------HHhcCC-CCCCeEEEEeCCCchhhhHHHHHHHHH
Confidence 1156899999999999887754322111 111111 346789999999999999999999998
Q ss_pred HhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCC
Q 003985 596 KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY 675 (781)
Q Consensus 596 ~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~ 675 (781)
++ ++++|+|+|+|+. .+.+++++++ .+|.|+| .++.+++..+|+. +|++|+||..
T Consensus 287 ~~----~~~~l~ivG~G~~------------~~~l~~~~~~----~~V~f~G----~v~~~ev~~~~~~-aDv~V~pS~~ 341 (465)
T PLN02871 287 RL----PGARLAFVGDGPY------------REELEKMFAG----TPTVFTG----MLQGDELSQAYAS-GDVFVMPSES 341 (465)
T ss_pred hC----CCcEEEEEeCChH------------HHHHHHHhcc----CCeEEec----cCCHHHHHHHHHH-CCEEEECCcc
Confidence 76 4799999999965 4566666653 3699999 6667899999995 9999999999
Q ss_pred CCCcHHHHHHHHcCCcEEEcCcccccccccc---CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH
Q 003985 676 EAFGLTVVEAMTCGLPTFATCHGGPAEIIEH---GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (781)
Q Consensus 676 E~fGltvlEAMa~GlPVIaT~~GG~~EiI~d---g~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~ 752 (781)
|+||++++|||+||+|||+|+.||..|++++ +++|++++|+|+++++++|.+++ +|++.+++|++++++++ +
T Consensus 342 E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~-~ 416 (465)
T PLN02871 342 ETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLL----ADPELRERMGAAAREEV-E 416 (465)
T ss_pred cccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-H
Confidence 9999999999999999999999999999999 99999999999999999998887 89999999999999988 6
Q ss_pred hcCcchh--hhcc-chHHHHHhc
Q 003985 753 RLVVSSD--GIVD-PSPFVINVI 772 (781)
Q Consensus 753 ~ysw~~~--~il~-~ye~ll~~~ 772 (781)
+|||+.+ .+++ .|++++..+
T Consensus 417 ~fsw~~~a~~l~~~~Y~~~~~~~ 439 (465)
T PLN02871 417 KWDWRAATRKLRNEQYSAAIWFW 439 (465)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHH
Confidence 8999987 6665 688887643
No 18
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=1.3e-38 Score=364.97 Aligned_cols=433 Identities=17% Similarity=0.131 Sum_probs=288.2
Q ss_pred EEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCc--cee---
Q 003985 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQ--RLE--- 354 (781)
Q Consensus 280 rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~--~~e--- 354 (781)
||++||+-.+|- ..+||...++. .|+++|++.||+|. |+|+.++......... ...
T Consensus 1 ~Il~v~~E~~p~-------~k~GGl~~~~~--------~L~~aL~~~G~~V~----Vi~p~y~~~~~~~~~~~~~~~~~~ 61 (476)
T cd03791 1 KVLFVASEVAPF-------AKTGGLGDVVG--------ALPKALAKLGHDVR----VIMPKYGRILDELRGQLLVLRLFG 61 (476)
T ss_pred CEEEEEcccccc-------ccCCcHHHHHH--------HHHHHHHHCCCeEE----EEecCCcchhhHhccCeEEEEEEe
Confidence 699999876642 36899999999 67777899999999 9998766532110000 000
Q ss_pred ------------eecCCCCeEEEEeccCCCcc--cc--cccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc
Q 003985 355 ------------RVSGTEHTHILRVPFRSEKG--IL--RQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG 418 (781)
Q Consensus 355 ------------~v~~~~~~~I~rvP~~~~~~--~~--~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~ 418 (781)
......++.+++++...... .. ..+....+-......|...+...+.. +..+|||||+|.|.+
T Consensus 62 ~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~-~~~~pDviH~hd~~t 140 (476)
T cd03791 62 VPVGGRPEYVGVFELPVDGVPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRR-LGWKPDIIHCHDWHT 140 (476)
T ss_pred eccCCceeEEEEEEEEeCCceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHh-cCCCCcEEEECchHH
Confidence 00112357777775433211 00 00000011111122344444444443 257999999999999
Q ss_pred hHHHHHHHHHc------CCcEEEEecCCccccCCCChhhHhh--------hhccccchhhhhHHHHHHhhCCEEEecCHH
Q 003985 419 NLVASLLAYKM------GITQCTIAHALEKTKYPDSDIYWKK--------FDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (781)
Q Consensus 419 ~lva~llar~~------gvp~v~t~H~l~~~k~~~s~~~~k~--------~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (781)
++++.++++.. ++|+|+|+|++.............. ....+.+...+..+..++..||.|+++|..
T Consensus 141 ~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~ 220 (476)
T cd03791 141 GLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPT 220 (476)
T ss_pred HHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCHh
Confidence 88888888774 8999999999865442211111000 001112233445677889999999999987
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccccc
Q 003985 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (781)
Q Consensus 485 ~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~ 564 (781)
.++.+.+..+ ...+.++ +.....|+.+|+||+|.+.|.|.........-.....+.....+...++++
T Consensus 221 ~~~~i~~~~~------~~gl~~~------~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~ 288 (476)
T cd03791 221 YAREILTPEF------GEGLDGL------LRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEEL 288 (476)
T ss_pred HHHHhCCCCC------CcchHHH------HHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHHc
Confidence 7653322100 0000000 011257999999999999998764322110000000000011112233557
Q ss_pred CCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003985 565 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (781)
Q Consensus 565 g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~ 644 (781)
|++.++++++|+++||+.+.||++.+++++.++.+. +++|+|+|+|.. ...+.++++++++ .++|.
T Consensus 289 g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~----------~~~~~~~~~~~~~--~~~v~ 354 (476)
T cd03791 289 GLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLEL--GGQLVILGSGDP----------EYEEALRELAARY--PGRVA 354 (476)
T ss_pred CCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHc--CcEEEEEecCCH----------HHHHHHHHHHHhC--CCcEE
Confidence 775457899999999999999999999999998764 499999999854 3456777777776 56788
Q ss_pred EeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCC------eEEEECCCCH
Q 003985 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGA------SGFHIDPYHP 718 (781)
Q Consensus 645 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~------~G~lv~p~d~ 718 (781)
+++ ..+.+++..+++ ++|++|+||.+|+||++++|||+||+|||+|+.||..|+|.++. +|++++++|+
T Consensus 355 ~~~----~~~~~~~~~~~~-~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~ 429 (476)
T cd03791 355 VLI----GYDEALAHLIYA-GADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNA 429 (476)
T ss_pred EEE----eCCHHHHHHHHH-hCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCH
Confidence 766 344556667788 49999999999999999999999999999999999999999988 9999999999
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003985 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 719 e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll 769 (781)
++++++|.++++ ...+++.|.++++++++ +.|||+. +++.|.+++
T Consensus 430 ~~l~~~i~~~l~-~~~~~~~~~~~~~~~~~---~~fsw~~--~a~~~~~~y 474 (476)
T cd03791 430 DALLAALRRALA-LYRDPEAWRKLQRNAMA---QDFSWDR--SAKEYLELY 474 (476)
T ss_pred HHHHHHHHHHHH-HHcCHHHHHHHHHHHhc---cCCChHH--HHHHHHHHH
Confidence 999999998763 33568899999888765 5799966 446676665
No 19
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=3.9e-38 Score=346.54 Aligned_cols=365 Identities=19% Similarity=0.291 Sum_probs=265.0
Q ss_pred eEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecC
Q 003985 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (781)
Q Consensus 279 ~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~ 358 (781)
|||++++. |..||.++++. +|++.|.++||+|+ |+|...+.... ..
T Consensus 1 mki~~~~~------------p~~gG~~~~~~--------~la~~L~~~G~~v~----v~~~~~~~~~~----------~~ 46 (371)
T cd04962 1 MKIGIVCY------------PTYGGSGVVAT--------ELGKALARRGHEVH----FITSSRPFRLD----------EY 46 (371)
T ss_pred CceeEEEE------------eCCCCccchHH--------HHHHHHHhcCCceE----EEecCCCcchh----------hh
Confidence 69999972 45699999999 77778899999999 99875332100 01
Q ss_pred CCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH----cCCcEE
Q 003985 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK----MGITQC 434 (781)
Q Consensus 359 ~~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~----~gvp~v 434 (781)
.++..+..++..... ......+.......+.+.+. ..+||+||+|++.+...+.+++++ .++|++
T Consensus 47 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~~i~---~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i 115 (371)
T cd04962 47 SPNIFFHEVEVPQYP--------LFQYPPYDLALASKIAEVAK---RYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVV 115 (371)
T ss_pred ccCeEEEEecccccc--------hhhcchhHHHHHHHHHHHHh---cCCccEEeecccCCccHHHHHHHHhcCcCCCcEE
Confidence 112333333322110 00111111122233333343 348999999987664444444433 279999
Q ss_pred EEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccC
Q 003985 435 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGI 514 (781)
Q Consensus 435 ~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi 514 (781)
++.|+....... ....+. .....+++.+|.|+++|....+.+.+. +
T Consensus 116 ~~~h~~~~~~~~--------~~~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~--------------------~- 161 (371)
T cd04962 116 TTLHGTDITLVG--------QDPSFQ-----PATRFSIEKSDGVTAVSESLRQETYEL--------------------F- 161 (371)
T ss_pred EEEcCCcccccc--------ccccch-----HHHHHHHhhCCEEEEcCHHHHHHHHHh--------------------c-
Confidence 999975322110 011111 123457889999999998765522111 0
Q ss_pred CCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHH
Q 003985 515 DVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECY 594 (781)
Q Consensus 515 ~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~ 594 (781)
....++.+||||+|...|.+......+ ..++. .+++++++++||+.+.||++.+++++
T Consensus 162 -~~~~~i~vi~n~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~il~~g~l~~~K~~~~li~a~ 219 (371)
T cd04962 162 -DITKEIEVIPNFVDEDRFRPKPDEALK-------------------RRLGA--PEGEKVLIHISNFRPVKRIDDVIRIF 219 (371)
T ss_pred -CCcCCEEEecCCcCHhhcCCCchHHHH-------------------HhcCC--CCCCeEEEEecccccccCHHHHHHHH
Confidence 125689999999998877664432211 22444 45778899999999999999999999
Q ss_pred HHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC
Q 003985 595 GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF 674 (781)
Q Consensus 595 ~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~ 674 (781)
.++.+. .+++|+++|+|++ .+.++++++++++.++|.|+|.+ +++..+++. +|++|+||.
T Consensus 220 ~~l~~~-~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-~d~~v~ps~ 279 (371)
T cd04962 220 AKVRKE-VPARLLLVGDGPE------------RSPAERLARELGLQDDVLFLGKQ------DHVEELLSI-ADLFLLPSE 279 (371)
T ss_pred HHHHhc-CCceEEEEcCCcC------------HHHHHHHHHHcCCCceEEEecCc------ccHHHHHHh-cCEEEeCCC
Confidence 998765 4689999999976 56788889999999999999943 357888885 999999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc
Q 003985 675 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERL 754 (781)
Q Consensus 675 ~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~y 754 (781)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ .|++.+.+|++++++.+.++|
T Consensus 280 ~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~f 355 (371)
T cd04962 280 KESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLL----EDDELWQEFSRAARNRAAERF 355 (371)
T ss_pred cCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999998877 899999999999999998999
Q ss_pred CcchhhhccchHHHHH
Q 003985 755 VVSSDGIVDPSPFVIN 770 (781)
Q Consensus 755 sw~~~~il~~ye~ll~ 770 (781)
||+. +++.|.+++.
T Consensus 356 s~~~--~~~~~~~~y~ 369 (371)
T cd04962 356 DSER--IVPQYEALYR 369 (371)
T ss_pred CHHH--HHHHHHHHHH
Confidence 9965 5566666664
No 20
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=2.4e-38 Score=356.36 Aligned_cols=280 Identities=16% Similarity=0.229 Sum_probs=226.5
Q ss_pred CCCceEEEEcCCCchHHHHHHHH--HcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecC
Q 003985 405 QGFPDFIIGNYSDGNLVASLLAY--KMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 482 (781)
Q Consensus 405 ~~~pDIIh~~~~~~~lva~llar--~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 482 (781)
+.+||+||+|++..+..+..+++ ..+.+.++|+|+....... ....|+ ......++++|+|+++|
T Consensus 116 ~~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~--------~~~~~~-----~~~~~~~~~ad~vv~~S 182 (406)
T PRK15427 116 PFVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSRE--------VLNHYT-----PEYQQLFRRGDLMLPIS 182 (406)
T ss_pred cCCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccch--------hhhhhh-----HHHHHHHHhCCEEEECC
Confidence 45799999999887777777766 3455778999975432110 001111 01234678999999999
Q ss_pred HHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccc
Q 003985 483 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (781)
Q Consensus 483 ~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~ 562 (781)
....+.+.+ .|++ ..|+.+||||+|.+.|.+....
T Consensus 183 ~~~~~~l~~--------------------~g~~--~~ki~vi~nGvd~~~f~~~~~~----------------------- 217 (406)
T PRK15427 183 DLWAGRLQK--------------------MGCP--PEKIAVSRMGVDMTRFSPRPVK----------------------- 217 (406)
T ss_pred HHHHHHHHH--------------------cCCC--HHHEEEcCCCCCHHHcCCCccc-----------------------
Confidence 876552211 1333 5689999999999887653210
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003985 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~ 642 (781)
...++..|+++||+.+.||++.+++|++++++..++++|+|+|+|+. .++++++++++++.++
T Consensus 218 -----~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~------------~~~l~~~~~~~~l~~~ 280 (406)
T PRK15427 218 -----APATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPW------------ERRLRTLIEQYQLEDV 280 (406)
T ss_pred -----cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECchh------------HHHHHHHHHHcCCCCe
Confidence 02345679999999999999999999999988788999999999976 6789999999999999
Q ss_pred EEEeccccCcCChHHHHHHHHccCcEEEEcCCC------CCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCC
Q 003985 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFY------EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY 716 (781)
Q Consensus 643 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~------E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~ 716 (781)
|.|+| .++.+++..+++. +|+||+||.. ||||++++|||+||+|||+|+.||..|+|.++.+|++++++
T Consensus 281 V~~~G----~~~~~el~~~l~~-aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~ 355 (406)
T PRK15427 281 VEMPG----FKPSHEVKAMLDD-ADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPEN 355 (406)
T ss_pred EEEeC----CCCHHHHHHHHHh-CCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCC
Confidence 99999 6678899999995 9999999974 99999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhccC-CHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003985 717 HPDQAAELMADFFGKCKE-NPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 717 d~e~lA~~I~~~l~~l~~-dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll~ 770 (781)
|+++++++|.+++ + ||+.+++|+++|++++.++|+|+. +.+.+.+++.
T Consensus 356 d~~~la~ai~~l~----~~d~~~~~~~~~~ar~~v~~~f~~~~--~~~~l~~~~~ 404 (406)
T PRK15427 356 DAQALAQRLAAFS----QLDTDELAPVVKRAREKVETDFNQQV--INRELASLLQ 404 (406)
T ss_pred CHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHHhcCHHH--HHHHHHHHHh
Confidence 9999999998887 7 999999999999999999999965 4455665553
No 21
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=4.5e-38 Score=361.11 Aligned_cols=429 Identities=15% Similarity=0.161 Sum_probs=274.9
Q ss_pred ceEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCc--ceee
Q 003985 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQ--RLER 355 (781)
Q Consensus 278 ~~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~--~~e~ 355 (781)
.|||++||.-..| .-.|||..=++- .|.++|+++||+|. |+++.+..-... ... ....
T Consensus 3 ~~~il~v~~E~~p-------~~k~ggl~dv~~--------~lp~~l~~~g~~v~----v~~P~y~~~~~~-~~~~~~~~~ 62 (485)
T PRK14099 3 PLRVLSVASEIFP-------LIKTGGLADVAG--------ALPAALKAHGVEVR----TLVPGYPAVLAG-IEDAEQVHS 62 (485)
T ss_pred CcEEEEEEecccc-------ccCCCcHHHHHH--------HHHHHHHHCCCcEE----EEeCCCcchhhh-hcCceEEEE
Confidence 4899999987664 346899876666 56777899999999 998876543111 110 1111
Q ss_pred ec---C---------CCCeEEEEeccCCCcccccccccccC-ch---------hhHHH---HHHHHHHHHHHH-cCCCce
Q 003985 356 VS---G---------TEHTHILRVPFRSEKGILRQWISRFD-VW---------PYLET---FTEDVGSEITAE-LQGFPD 409 (781)
Q Consensus 356 v~---~---------~~~~~I~rvP~~~~~~~~~~~isr~~-i~---------~yl~~---f~~~~~~~i~~~-l~~~pD 409 (781)
.. + .+++.++.+-.. .+..|.. ++ ...++ |+..+...+... ...+||
T Consensus 63 ~~~~~~~~~~~~~~~~~~v~~~~~~~~-------~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pD 135 (485)
T PRK14099 63 FPDLFGGPARLLAARAGGLDLFVLDAP-------HLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPD 135 (485)
T ss_pred EeeeCCceEEEEEEEeCCceEEEEeCh-------HhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCC
Confidence 11 1 012333332111 1111110 11 11222 333333222221 145899
Q ss_pred EEEEcCCCchHHHHHHHHH--cCCcEEEEecCCccccCCCChh------hHhhhh-ccccchhhhhHHHHHHhhCCEEEe
Q 003985 410 FIIGNYSDGNLVASLLAYK--MGITQCTIAHALEKTKYPDSDI------YWKKFD-EKYHFSCQFTADLIAMNNADFIIT 480 (781)
Q Consensus 410 IIh~~~~~~~lva~llar~--~gvp~v~t~H~l~~~k~~~s~~------~~k~~~-~~y~f~~~~~~e~~a~~~AD~IIt 480 (781)
|||+|.|.+++++.++... .++|.|+|+|++.......... .+..+. ....+.......+.++..||.|+|
T Consensus 136 IiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vit 215 (485)
T PRK14099 136 IVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITT 215 (485)
T ss_pred EEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeee
Confidence 9999999999888777642 4689999999986443211111 111000 000111111235568899999999
Q ss_pred cCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccc
Q 003985 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (781)
Q Consensus 481 ~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~ 560 (781)
+|+..++.+.+.. ..+.+++.+ .....|+.+|+||+|.+.|.|.++..-...--...++....+....
T Consensus 216 VS~~~a~ei~~~~------~g~gl~~~l------~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l 283 (485)
T PRK14099 216 VSPTYALEIQGPE------AGMGLDGLL------RQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAAL 283 (485)
T ss_pred cChhHHHHHhccc------CCcChHHHH------HhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHH
Confidence 9988765432210 000111100 1125689999999999999886542100000000000000001122
Q ss_pred ccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003985 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (781)
Q Consensus 561 ~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~ 640 (781)
++.+|+..+++.++|+++||+.++||++.|++|+.++.+ .+++|+|+|+|+. ...+.+++++++++
T Consensus 284 ~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~~~~lvivG~G~~----------~~~~~l~~l~~~~~-- 349 (485)
T PRK14099 284 QARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLG--EGAQLALLGSGDA----------ELEARFRAAAQAYP-- 349 (485)
T ss_pred HHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHh--cCcEEEEEecCCH----------HHHHHHHHHHHHCC--
Confidence 355788545678899999999999999999999998865 3699999999854 34567888888764
Q ss_pred CcE-EEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC---------CeE
Q 003985 641 GQF-RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG---------ASG 710 (781)
Q Consensus 641 ~~V-~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg---------~~G 710 (781)
+++ .|+|+ .+++..+|..++|+||+||.+|+||++++|||+||+|+|+|++||+.|+|.++ .+|
T Consensus 350 ~~v~~~~G~------~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G 423 (485)
T PRK14099 350 GQIGVVIGY------DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATG 423 (485)
T ss_pred CCEEEEeCC------CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCce
Confidence 455 78884 45788877435999999999999999999999999999999999999999876 689
Q ss_pred EEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh--hhccchHHHH
Q 003985 711 FHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD--GIVDPSPFVI 769 (781)
Q Consensus 711 ~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~--~il~~ye~ll 769 (781)
++++|+|+++++++|.+++. +..|++.|++|+++++ .++|||+++ .+.+.|++++
T Consensus 424 ~l~~~~d~~~La~ai~~a~~-l~~d~~~~~~l~~~~~---~~~fSw~~~a~~y~~lY~~l~ 480 (485)
T PRK14099 424 VQFSPVTADALAAALRKTAA-LFADPVAWRRLQRNGM---TTDVSWRNPAQHYAALYRSLV 480 (485)
T ss_pred EEeCCCCHHHHHHHHHHHHH-HhcCHHHHHHHHHHhh---hhcCChHHHHHHHHHHHHHHH
Confidence 99999999999999987532 3379999999999986 378999876 4444444443
No 22
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=4e-37 Score=343.56 Aligned_cols=375 Identities=15% Similarity=0.174 Sum_probs=271.6
Q ss_pred CceEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeee
Q 003985 277 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (781)
Q Consensus 277 ~~~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v 356 (781)
|+-||+++..--+|-+ ....||+++++. +++++|+. +|+ |+|...+.-.. .+
T Consensus 1 ~~~~~~~~~~~~~~~p-----~~~~g~ve~~~~--------~~~~~l~~---~~~----~~~~~~~~~~~------~~-- 52 (380)
T PRK15484 1 MIDKIIFTVTPIFSIP-----PRGAAAVETWIY--------QVAKRTSI---PNR----IACIKNPGYPE------YT-- 52 (380)
T ss_pred CCceEEEEeccCCCCC-----CccccHHHHHHH--------HhhhhccC---Cee----EEEecCCCCCc------hh--
Confidence 6778888876666533 234799999999 66666643 899 99988653110 00
Q ss_pred cCCCCeEEEEeccCCCcc-cccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEE
Q 003985 357 SGTEHTHILRVPFRSEKG-ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCT 435 (781)
Q Consensus 357 ~~~~~~~I~rvP~~~~~~-~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~v~ 435 (781)
...+|+.|+++++....+ ...+|.+. ..+ .|...+...+......++||||+|... .+...+..+..+.+++.
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~vi~v~~~~-~~~~~~~~~~~~~~~v~ 126 (380)
T PRK15484 53 KVNDNCDIHYIGFSRIYKRLFQKWTRL-DPL----PYSQRILNIAHKFTITKDSVIVIHNSM-KLYRQIRERAPQAKLVM 126 (380)
T ss_pred hccCCCceEEEEeccccchhhhhhhcc-Cch----hHHHHHHHHHHhcCCCCCcEEEEeCcH-HhHHHHHhhCCCCCEEE
Confidence 112357788877754321 12233222 222 233334444433323579999999754 34444555556789999
Q ss_pred EecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCC
Q 003985 436 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 515 (781)
Q Consensus 436 t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~ 515 (781)
+.|..... ..++.++.||++|....+...+ +.
T Consensus 127 ~~h~~~~~--------------------------~~~~~~~~ii~~S~~~~~~~~~---------------------~~- 158 (380)
T PRK15484 127 HMHNAFEP--------------------------ELLDKNAKIIVPSQFLKKFYEE---------------------RL- 158 (380)
T ss_pred EEecccCh--------------------------hHhccCCEEEEcCHHHHHHHHh---------------------hC-
Confidence 99953210 1234678999999876542111 11
Q ss_pred CCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHH
Q 003985 516 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYG 595 (781)
Q Consensus 516 ~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~ 595 (781)
...++.+||||+|.+.|.+......+ +.+|+ ++++++|+|+||+.+.||++.|++|+.
T Consensus 159 -~~~~i~vIpngvd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 159 -PNADISIVPNGFCLETYQSNPQPNLR-------------------QQLNI--SPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred -CCCCEEEecCCCCHHHcCCcchHHHH-------------------HHhCC--CCCCeEEEEeccCccccCHHHHHHHHH
Confidence 15689999999999888764432211 23555 456788999999999999999999999
Q ss_pred HhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCC
Q 003985 596 KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY 675 (781)
Q Consensus 596 ~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~ 675 (781)
++.+..|+++|+|+|+++.. .+.+..++.+.+++++++++ .+|.|+| .++.+++..+|+. +|++|+||.+
T Consensus 217 ~l~~~~p~~~lvivG~g~~~---~~~~~~~~~~~l~~~~~~l~--~~v~~~G----~~~~~~l~~~~~~-aDv~v~pS~~ 286 (380)
T PRK15484 217 KLATAHSNLKLVVVGDPTAS---SKGEKAAYQKKVLEAAKRIG--DRCIMLG----GQPPEKMHNYYPL-ADLVVVPSQV 286 (380)
T ss_pred HHHHhCCCeEEEEEeCCccc---cccchhHHHHHHHHHHHhcC--CcEEEeC----CCCHHHHHHHHHh-CCEEEeCCCC
Confidence 99888899999999998652 11123355667777887765 5799999 6677899999995 9999999975
Q ss_pred -CCCcHHHHHHHHcCCcEEEcCccccccccccCCeEE-EECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHh
Q 003985 676 -EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGF-HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYER 753 (781)
Q Consensus 676 -E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~-lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ 753 (781)
|+||++++|||+||+|||+|+.||..|++.++.+|+ +++|.|+++++++|.+++ +|++. .+++++|++.+.++
T Consensus 287 ~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll----~d~~~-~~~~~~ar~~~~~~ 361 (380)
T PRK15484 287 EEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTL----ADPEL-TQIAEQAKDFVFSK 361 (380)
T ss_pred ccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHH----cCHHH-HHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999 568999999999998887 78875 78999999999999
Q ss_pred cCcchhhhccchHHHHHhc
Q 003985 754 LVVSSDGIVDPSPFVINVI 772 (781)
Q Consensus 754 ysw~~~~il~~ye~ll~~~ 772 (781)
|||+. +++.|++++..+
T Consensus 362 fsw~~--~a~~~~~~l~~~ 378 (380)
T PRK15484 362 YSWEG--VTQRFEEQIHNW 378 (380)
T ss_pred CCHHH--HHHHHHHHHHHh
Confidence 99965 556777777543
No 23
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=3.6e-37 Score=342.39 Aligned_cols=382 Identities=19% Similarity=0.252 Sum_probs=260.5
Q ss_pred eEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecC
Q 003985 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (781)
Q Consensus 279 ~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~ 358 (781)
|||+++.|... .||.++++. +|+++|+++||+|+ |+|...+... +. .+...+
T Consensus 1 mkIl~~~~~~~-----------~gG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~---~~--~~~~~~ 52 (392)
T cd03805 1 LRVAFIHPDLG-----------IGGAERLVV--------DAALALQSRGHEVT----IYTSHHDPSH---CF--EETKDG 52 (392)
T ss_pred CeEEEECCCCC-----------CchHHHHHH--------HHHHHHHhCCCeEE----EEcCCCCchh---cc--hhccCC
Confidence 79999986543 589999999 77777899999999 9986532110 00 001111
Q ss_pred CCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHH--HHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEE
Q 003985 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEIT--AELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTI 436 (781)
Q Consensus 359 ~~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~--~~l~~~pDIIh~~~~~~~lva~llar~~gvp~v~t 436 (781)
++.+...+.....++ .++ ...+..+.......+. .....++|+||+|....+.. ++....+.|++++
T Consensus 53 --~~~i~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~--~~~~~~~~~~i~~ 121 (392)
T cd03805 53 --TLPVRVRGDWLPRSI----FGR---FHILCAYLRMLYLALYLLLLPDEKYDVFIVDQVSACVP--LLKLFSPSKILFY 121 (392)
T ss_pred --eeEEEEEeEEEcchh----hHh---HHHHHHHHHHHHHHHHHHhcccCCCCEEEEcCcchHHH--HHHHhcCCcEEEE
Confidence 122222211100000 000 0011111111111111 11245899999987554332 2233334899999
Q ss_pred ecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCC
Q 003985 437 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 516 (781)
Q Consensus 437 ~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~ 516 (781)
.|.............. ..|+... ...+..+++.+|.|+++|....+.+.+.. ....
T Consensus 122 ~h~~~~~~~~~~~~~~----~~~~~~~-~~~e~~~~~~ad~ii~~s~~~~~~~~~~~------------------~~~~- 177 (392)
T cd03805 122 CHFPDQLLAQRGSLLK----RLYRKPF-DWLEEFTTGMADKIVVNSNFTASVFKKTF------------------PSLA- 177 (392)
T ss_pred EecChHHhcCCCcHHH----HHHHHHH-HHHHHHHhhCceEEEEcChhHHHHHHHHh------------------cccc-
Confidence 9943211100111111 1111111 13466789999999999987654222110 0111
Q ss_pred CCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHH
Q 003985 517 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 596 (781)
Q Consensus 517 f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~ 596 (781)
..++.+|+||+|.+.|.+......+ +..+. .+++++|+++||+.+.||++.+++|+++
T Consensus 178 -~~~~~vi~n~vd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~grl~~~Kg~~~ll~a~~~ 235 (392)
T cd03805 178 -KNPREVVYPCVDTDSFESTSEDPDP-------------------GLLIP--KSGKKTFLSINRFERKKNIALAIEAFAI 235 (392)
T ss_pred -cCCcceeCCCcCHHHcCcccccccc-------------------ccccc--CCCceEEEEEeeecccCChHHHHHHHHH
Confidence 2344699999999887664322100 11222 4567899999999999999999999999
Q ss_pred hhccC---CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHH-cCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEc
Q 003985 597 NSQLR---ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT-YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQP 672 (781)
Q Consensus 597 l~~~~---~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~e-l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~P 672 (781)
+.+.. ++++|+++|+++. ...++.++.+++++++++ +++.++|.|+| .++.+++..+++. +|++++|
T Consensus 236 l~~~~~~~~~~~l~i~G~~~~----~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g----~~~~~~~~~~l~~-ad~~l~~ 306 (392)
T cd03805 236 LKDKLAEFKNVRLVIAGGYDP----RVAENVEYLEELQRLAEELLLLEDQVIFLP----SISDSQKELLLSS-ARALLYT 306 (392)
T ss_pred HHhhcccccCeEEEEEcCCCC----CCchhHHHHHHHHHHHHHhcCCCceEEEeC----CCChHHHHHHHhh-CeEEEEC
Confidence 98776 7999999999865 122344567889999999 99999999999 6777899999995 9999999
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH
Q 003985 673 AFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (781)
Q Consensus 673 S~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~ 752 (781)
|..|+||++++|||+||+|||+|+.||..|++.++.+|+++++ |+++++++|.+++ .+++.+++++++|++++.+
T Consensus 307 s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~----~~~~~~~~~~~~a~~~~~~ 381 (392)
T cd03805 307 PSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLA----NDPDLADRMGAAGRKRVKE 381 (392)
T ss_pred CCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999986 9999999998877 8999999999999999999
Q ss_pred hcCcchh
Q 003985 753 RLVVSSD 759 (781)
Q Consensus 753 ~ysw~~~ 759 (781)
+|||+.+
T Consensus 382 ~~s~~~~ 388 (392)
T cd03805 382 KFSTEAF 388 (392)
T ss_pred hcCHHHH
Confidence 9999765
No 24
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=1.8e-36 Score=339.37 Aligned_cols=360 Identities=15% Similarity=0.189 Sum_probs=243.2
Q ss_pred HHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccccccCchhhHHHHH----
Q 003985 318 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFT---- 393 (781)
Q Consensus 318 eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~---- 393 (781)
+|+++|+++||+|+ ++|....... .+ ++++++++...... ...++|...+.
T Consensus 15 ~la~~L~~~G~~v~----~~~~~~~~~~-----------~~--~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 69 (396)
T cd03818 15 HLAPALAAQGHEVV----FLTEPNAAPP-----------PG--GVRVVRYRPPRGPT--------SGTHPYLREFEEAVL 69 (396)
T ss_pred HHHHHHHHCCCEEE----EEecCCCCCC-----------CC--CeeEEEecCCCCCC--------CCCCccchhHHHHHH
Confidence 67888999999999 9988743211 11 57888887553311 12223322221
Q ss_pred --HHHHHHHHHH--cCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCccccCCCC----hhhHhhhhccccchhh
Q 003985 394 --EDVGSEITAE--LQGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPDS----DIYWKKFDEKYHFSCQ 464 (781)
Q Consensus 394 --~~~~~~i~~~--l~~~pDIIh~~~~~~~lva~llar~-~gvp~v~t~H~l~~~k~~~s----~~~~k~~~~~y~f~~~ 464 (781)
..+.+.+... .+.+|||||+|...+. +..+++. .++|+|...|-+......+. ....+.. ...+....
T Consensus 70 ~~~~~~~~~~~~~~~~~~pdvi~~h~~~~~--~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 146 (396)
T cd03818 70 RGQAVARALLALRAKGFRPDVIVAHPGWGE--TLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLD-DALRLRNR 146 (396)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCccch--hhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchh-HHHHHHHh
Confidence 1222222221 2458999999976542 2234444 46888876653222111000 0000000 00111111
Q ss_pred hhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHh
Q 003985 465 FTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLT 544 (781)
Q Consensus 465 ~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~ 544 (781)
.......++.||.+|++|....+.+.. .+..|+.|||||+|.+.|.|.........
T Consensus 147 ~~~~~~~~~~ad~vi~~s~~~~~~~~~------------------------~~~~ki~vI~ngvd~~~f~~~~~~~~~~~ 202 (396)
T cd03818 147 NALILLALAQADAGVSPTRWQRSTFPA------------------------ELRSRISVIHDGIDTDRLRPDPQARLRLP 202 (396)
T ss_pred hhHhHHHHHhCCEEECCCHHHHhhCcH------------------------hhccceEEeCCCccccccCCCchhhhccc
Confidence 112346789999999999877552111 11468999999999999887653322110
Q ss_pred hhhcchhhhccCccccccccCCCCCCCCCEEEEEee-ccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHH
Q 003985 545 ALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMAR-LDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREE 623 (781)
Q Consensus 545 ~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGR-L~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee 623 (781)
...++ .+++++|+|+|| +.+.||++.+++|++++.+..++++|+|+|++.. .....++.
T Consensus 203 -----------------~~~~~--~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~-~~g~~~~~ 262 (396)
T cd03818 203 -----------------NGRVL--TPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGV-SYGAPPPD 262 (396)
T ss_pred -----------------ccccC--CCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCc-ccCCCCCC
Confidence 11122 456789999998 9999999999999999988889999999998532 00000000
Q ss_pred -HHHHHHH-HHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccc
Q 003985 624 -IAEIEKM-HELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPA 701 (781)
Q Consensus 624 -~~~~~~l-~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~ 701 (781)
..+.+.+ +++..+++ .++|.|+| .++.+++..+|+. +|++|+||..|++|++++||||||+|||+|+.||..
T Consensus 263 ~~~~~~~~~~~~~~~~~-~~~V~f~G----~v~~~~~~~~l~~-adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~ 336 (396)
T cd03818 263 GESWKQHMLDELGGRLD-LSRVHFLG----RVPYDQYLALLQV-SDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVR 336 (396)
T ss_pred cccHHHHHHHHhhcccC-cceEEEeC----CCCHHHHHHHHHh-CcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCch
Confidence 0112222 22222222 47899999 6778899999995 999999999999999999999999999999999999
Q ss_pred cccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003985 702 EIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 702 EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~ 759 (781)
|+|.++.+|++++++|++++|++|.+++ +|++.+++|+++|++++.++|||+.+
T Consensus 337 e~i~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~l~~~ar~~~~~~fs~~~~ 390 (396)
T cd03818 337 EVITDGENGLLVDFFDPDALAAAVIELL----DDPARRARLRRAARRTALRYDLLSVC 390 (396)
T ss_pred hhcccCCceEEcCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhccHHHH
Confidence 9999999999999999999999998887 89999999999999999999999764
No 25
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=1.3e-36 Score=336.79 Aligned_cols=364 Identities=15% Similarity=0.190 Sum_probs=259.9
Q ss_pred EEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCC
Q 003985 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+.+.++. ..||.+.++. +|++.|.+.|+++. |++....+ ........
T Consensus 3 ~il~ii~~~-----------~~GG~e~~~~--------~l~~~l~~~~~~~~----v~~~~~~~--------~~~~~~~~ 51 (374)
T TIGR03088 3 LIVHVVYRF-----------DVGGLENGLV--------NLINHLPADRYRHA----VVALTEVS--------AFRKRIQR 51 (374)
T ss_pred eEEEEeCCC-----------CCCcHHHHHH--------HHHhhccccccceE----EEEcCCCC--------hhHHHHHh
Confidence 677776543 3699999999 67777888999988 77643211 11111111
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE-EEEec
Q 003985 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ-CTIAH 438 (781)
Q Consensus 360 ~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~-v~t~H 438 (781)
.++.+++++.... ..+ .+...+.+.+.+. +|||||+|...+ ..+.++++..++|. +++.|
T Consensus 52 ~~i~~~~~~~~~~-----------~~~----~~~~~l~~~l~~~---~~Divh~~~~~~-~~~~~~~~~~~~~~~i~~~h 112 (374)
T TIGR03088 52 PDVAFYALHKQPG-----------KDV----AVYPQLYRLLRQL---RPDIVHTRNLAA-LEAQLPAALAGVPARIHGEH 112 (374)
T ss_pred cCceEEEeCCCCC-----------CCh----HHHHHHHHHHHHh---CCCEEEEcchhH-HHHHHHHHhcCCCeEEEeec
Confidence 2567777654321 011 1122344444443 899999997544 34455666778775 44555
Q ss_pred CCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003985 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~ 518 (781)
+....... ...| .|.+ ........+|.+|++|....+...+. .|++ .
T Consensus 113 ~~~~~~~~--~~~~-----~~~~-----~~~~~~~~~~~~i~vs~~~~~~~~~~-------------------~~~~--~ 159 (374)
T TIGR03088 113 GRDVFDLD--GSNW-----KYRW-----LRRLYRPLIHHYVAVSRDLEDWLRGP-------------------VKVP--P 159 (374)
T ss_pred Ccccccch--hhHH-----HHHH-----HHHHHHhcCCeEEEeCHHHHHHHHHh-------------------cCCC--h
Confidence 43211110 0011 1121 12234556899999998775522211 1222 5
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003985 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.+||||+|.+.|.+.........+ .... ..++++|+++||+.+.||++.+++|+.++.
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~~~~~~~~-----------------~~~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~ 220 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRGDRSPILP-----------------PDFF--ADESVVVGTVGRLQAVKDQPTLVRAFALLV 220 (374)
T ss_pred hhEEEeccCccccccCCCccchhhhhH-----------------hhcC--CCCCeEEEEEecCCcccCHHHHHHHHHHHH
Confidence 789999999999888765322211100 0111 356789999999999999999999999987
Q ss_pred ccCC----CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC
Q 003985 599 QLRE----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF 674 (781)
Q Consensus 599 ~~~~----~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~ 674 (781)
+..+ +++|+++|+|+. .+.+++.++++++.++|.|+|.+ .++..+++. +|++|+||.
T Consensus 221 ~~~~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~pS~ 281 (374)
T TIGR03088 221 RQLPEGAERLRLVIVGDGPA------------RGACEQMVRAAGLAHLVWLPGER------DDVPALMQA-LDLFVLPSL 281 (374)
T ss_pred HhCcccccceEEEEecCCch------------HHHHHHHHHHcCCcceEEEcCCc------CCHHHHHHh-cCEEEeccc
Confidence 6544 689999999876 56788999999999999999943 357888885 999999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc
Q 003985 675 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERL 754 (781)
Q Consensus 675 ~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~y 754 (781)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ .|++.+++++++|++++.++|
T Consensus 282 ~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~~~~~~~f 357 (374)
T TIGR03088 282 AEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYV----SDPAARRAHGAAGRARAEQQF 357 (374)
T ss_pred cccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999998877 799999999999999999999
Q ss_pred CcchhhhccchHHHHH
Q 003985 755 VVSSDGIVDPSPFVIN 770 (781)
Q Consensus 755 sw~~~~il~~ye~ll~ 770 (781)
||+.+ ++.|++++.
T Consensus 358 s~~~~--~~~~~~~y~ 371 (374)
T TIGR03088 358 SINAM--VAAYAGLYD 371 (374)
T ss_pred CHHHH--HHHHHHHHH
Confidence 99764 566666654
No 26
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=2.8e-36 Score=341.49 Aligned_cols=398 Identities=16% Similarity=0.129 Sum_probs=264.6
Q ss_pred CCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcc----
Q 003985 299 PDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKG---- 374 (781)
Q Consensus 299 p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvP~~~~~~---- 374 (781)
-..||.++.+..+|-++.....+.=+-.|+.|...|-++||......|..+-...-...+.++..+-+++...+..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (578)
T PRK15490 171 LGSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPELRQDFFLKEVLEEQVEVLEIAKITGNLFDDATIE 250 (578)
T ss_pred CCCCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecCcccCcchhHHHHHhcCCceEEeeccchhhhhhcccc
Confidence 3479999999977775544443333345777888888999997665554332111111333344555554322211
Q ss_pred --cccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEE-ecCCccccCCCChhh
Q 003985 375 --ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTI-AHALEKTKYPDSDIY 451 (781)
Q Consensus 375 --~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~v~t-~H~l~~~k~~~s~~~ 451 (781)
+++.+++.. -|....-.......++ ..+|||||+|...+++.+.++++..|+|++++ .|...... .
T Consensus 251 ~~~~~~~~~~~--~~~~~~~~~~l~~~ir---~~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~~------~ 319 (578)
T PRK15490 251 SPELRLLLSHL--PPVCKYGIKHLVPHLC---ERKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPVV------R 319 (578)
T ss_pred chHHHHHHhcC--ChHHHHHHHHHHHHHH---HcCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCcc------h
Confidence 111111110 0111111112223333 34999999999888888999999999999654 56521110 0
Q ss_pred HhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCC
Q 003985 452 WKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMD 531 (781)
Q Consensus 452 ~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~ 531 (781)
...+...|....+ .......+| +++.|....+. +.+ ..|+ ...|+.|||||+|..
T Consensus 320 ~r~~~~e~~~~~~---a~~i~~~sd-~v~~s~~v~~~-------l~~------------~lgi--p~~KI~VIyNGVD~~ 374 (578)
T PRK15490 320 KRLFKPEYEPLYQ---ALAVVPGVD-FMSNNHCVTRH-------YAD------------WLKL--EAKHFQVVYNGVLPP 374 (578)
T ss_pred hhHHHHHHHHhhh---hceeEecch-hhhccHHHHHH-------HHH------------HhCC--CHHHEEEEeCCcchh
Confidence 0011111110000 001122333 44455443221 111 1133 377999999999999
Q ss_pred CCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeC
Q 003985 532 IYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAG 611 (781)
Q Consensus 532 ~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~ 611 (781)
.|.|........+. ....++ +++.++|+++||+...||...+++++.++.+..++++|+|+|+
T Consensus 375 rf~p~~~~~~~~r~---------------~~~~~l--~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGd 437 (578)
T PRK15490 375 STEPSSEVPHKIWQ---------------QFTQKT--QDADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGD 437 (578)
T ss_pred hcCccchhhHHHHH---------------Hhhhcc--CCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeC
Confidence 88775432111100 001223 3456789999999999999999999999887788999999999
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCc
Q 003985 612 YIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP 691 (781)
Q Consensus 612 g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP 691 (781)
|+. .++++++++++++.++|+|+|++ .++..+|+. +|+||+||.+|+||++++|||+||+|
T Consensus 438 G~~------------~eeLk~la~elgL~d~V~FlG~~------~Dv~~~Laa-ADVfVlPS~~EGfp~vlLEAMA~GlP 498 (578)
T PRK15490 438 GDL------------RAEAQKRAEQLGILERILFVGAS------RDVGYWLQK-MNVFILFSRYEGLPNVLIEAQMVGVP 498 (578)
T ss_pred chh------------HHHHHHHHHHcCCCCcEEECCCh------hhHHHHHHh-CCEEEEcccccCccHHHHHHHHhCCC
Confidence 976 67899999999999999999953 467888884 99999999999999999999999999
Q ss_pred EEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHh
Q 003985 692 TFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINV 771 (781)
Q Consensus 692 VIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll~~ 771 (781)
||+|+.||..|+|.+|++|++++++|++++++++..+ ..+..+...+..|+++|++++.++|||+. +++.|.++++.
T Consensus 499 VVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA-~aL~~ll~~~~~mg~~ARe~V~e~FS~e~--Mv~~y~ki~~~ 575 (578)
T PRK15490 499 VISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYA-EKLVNLWRSRTGICQQTQSFLQERFTVEH--MVGTFVKTIAS 575 (578)
T ss_pred EEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCHHH--HHHHHHHHHHh
Confidence 9999999999999999999999999999988876332 22334555667899999999999999955 66889988864
No 27
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=4.6e-36 Score=327.34 Aligned_cols=347 Identities=19% Similarity=0.217 Sum_probs=260.8
Q ss_pred CcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCccccccc
Q 003985 300 DTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQW 379 (781)
Q Consensus 300 ~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvP~~~~~~~~~~~ 379 (781)
..||.++++. +|+++|+++||+|. +++...+. .... ...+++++++++...+
T Consensus 8 ~~gG~e~~~~--------~l~~~L~~~g~~v~----v~~~~~~~------~~~~----~~~~~~~~~~~~~~~~------ 59 (355)
T cd03819 8 ESGGVERGTL--------ELARALVERGHRSL----VASAGGRL------VAEL----EAEGSRHIKLPFISKN------ 59 (355)
T ss_pred ccCcHHHHHH--------HHHHHHHHcCCEEE----EEcCCCch------HHHH----HhcCCeEEEccccccc------
Confidence 3599999999 77778899999998 88754211 1111 1124566666654421
Q ss_pred ccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccc
Q 003985 380 ISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKY 459 (781)
Q Consensus 380 isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y 459 (781)
.+..+ .+...+.+.+.+ .+||+||+|+....+.+.++++..++|++++.|+...... .
T Consensus 60 -----~~~~~-~~~~~l~~~~~~---~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~------------~- 117 (355)
T cd03819 60 -----PLRIL-LNVARLRRLIRE---EKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF------------R- 117 (355)
T ss_pred -----hhhhH-HHHHHHHHHHHH---cCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH------------H-
Confidence 11111 112233333433 4899999999887788888888899999999997643210 1
Q ss_pred cchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHH
Q 003985 460 HFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK 539 (781)
Q Consensus 460 ~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~ 539 (781)
....+..+|.++++|....+...+ ..|++ ..++.+||||+|.+.|.+....
T Consensus 118 --------~~~~~~~~~~vi~~s~~~~~~~~~-------------------~~~~~--~~k~~~i~ngi~~~~~~~~~~~ 168 (355)
T cd03819 118 --------YNAIMARGDRVIAVSNFIADHIRE-------------------NYGVD--PDRIRVIPRGVDLDRFDPGAVP 168 (355)
T ss_pred --------HHHHHHhcCEEEEeCHHHHHHHHH-------------------hcCCC--hhhEEEecCCccccccCccccc
Confidence 123467899999999877552221 11332 6799999999999887654322
Q ss_pred HHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCc
Q 003985 540 QKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSK 619 (781)
Q Consensus 540 ~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~ 619 (781)
...... .+++++. ++++++++++||+.+.||++.+++++.++++..++++|+|+|+++.
T Consensus 169 ~~~~~~--------------~~~~~~~--~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~----- 227 (355)
T cd03819 169 PERILA--------------LAREWPL--PKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQG----- 227 (355)
T ss_pred hHHHHH--------------HHHHcCC--CCCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcc-----
Confidence 111100 0122343 4667899999999999999999999999988778999999999865
Q ss_pred chHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcC-CCCCCcHHHHHHHHcCCcEEEcCcc
Q 003985 620 DREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFATCHG 698 (781)
Q Consensus 620 d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS-~~E~fGltvlEAMa~GlPVIaT~~G 698 (781)
+....+.+.+.++++++.++|.|+|+ .+++..+++. +|++++|| ..|+||++++|||+||+|||+|+.|
T Consensus 228 ---~~~~~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~l~~-ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~ 297 (355)
T cd03819 228 ---RRFYYAELLELIKRLGLQDRVTFVGH------CSDMPAAYAL-ADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG 297 (355)
T ss_pred ---cchHHHHHHHHHHHcCCcceEEEcCC------cccHHHHHHh-CCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC
Confidence 11344566778888999899999995 3478899995 99999999 8999999999999999999999999
Q ss_pred ccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003985 699 GPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 699 G~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~ 759 (781)
|..|++.++.+|++++++|+++++++|..++. .+++.+++++++|++.+.++|||+.|
T Consensus 298 ~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~---~~~~~~~~~~~~a~~~~~~~f~~~~~ 355 (355)
T cd03819 298 GARETVRPGETGLLVPPGDAEALAQALDQILS---LLPEGRAKMFAKARMCVETLFSYDRM 355 (355)
T ss_pred CcHHHHhCCCceEEeCCCCHHHHHHHHHHHHh---hCHHHHHHHHHHHHHHHHHhhhhccC
Confidence 99999999999999999999999999975552 68999999999999999999999864
No 28
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=6.3e-36 Score=352.34 Aligned_cols=457 Identities=13% Similarity=0.167 Sum_probs=289.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCchhH-------HHHhhhcCCccccCCcHHHHHHHHHHHHHhhcCCCcccHhhhhcCC
Q 003985 203 ISRLQSSLSKAEDHLSKLPPDTPFSQF-------EYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRL 275 (781)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~gwg~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~r~ 275 (781)
.+.=..++++|.+..+.=. .-|.+. -.-+|.+|=|.---++--|+.-|-+++...-+-- +...+. -+
T Consensus 204 ~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~ 277 (694)
T PRK15179 204 LWRARDVLQAGLDAIGDGA--RKLTRRLVDLNADLAALRRLGVEGDGRDVPVSILVLEKMLQEIGRRR-NAEYDA---GP 277 (694)
T ss_pred HHHHHHHHHHHHHhhCcch--HHHHHHHHHHHHHHHHHHHcCcccccCCCceeeeeHHHHHHHHhhcC-cccccC---CC
Confidence 4445556666665554333 122222 2246777777655666677777777766544211 110110 01
Q ss_pred CCce-EEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCC------------ceeeceeEEEccCC
Q 003985 276 PMVF-NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGL------------DISPKILIVTRLIP 342 (781)
Q Consensus 276 p~~~-rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~Gh------------eV~~~v~VlT~~~p 342 (781)
.... ||+++.+.. ..||.+.+++ .|+.+|.++|. ++. |++++..
T Consensus 278 ~~~~~rIl~vi~sl-----------~~GGAEr~~~--------~La~~l~~~~~~~~~~~g~g~~~~~~--V~~~~~~-- 334 (694)
T PRK15179 278 ESFVGPVLMINGSL-----------GAGGAERQFV--------NTAVALQSAIQQGQSIAGYGVLGPVQ--VVCRSLR-- 334 (694)
T ss_pred CCCcceEEEEeCCC-----------CCCcHHHHHH--------HHHHHHHhcccCcccccCccCCCCcE--EEEEecc--
Confidence 1234 888887543 3699999999 55566677744 233 2233221
Q ss_pred CCCCC-ccCcceeeecCCCCeEEEEeccCCCccccc--ccccccC----chh-hHHHHHHHHHHHHHHHcCCCceEEEEc
Q 003985 343 DAKGT-TCNQRLERVSGTEHTHILRVPFRSEKGILR--QWISRFD----VWP-YLETFTEDVGSEITAELQGFPDFIIGN 414 (781)
Q Consensus 343 ~~~~~-~~~~~~e~v~~~~~~~I~rvP~~~~~~~~~--~~isr~~----i~~-yl~~f~~~~~~~i~~~l~~~pDIIh~~ 414 (781)
...+. .+...+. ..++.+..++.....+... .+..... ..| ........+.+.+++ .+|||||+|
T Consensus 335 ~~~g~~~~~~~L~----~~Gv~v~~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~---~kpDIVH~h 407 (694)
T PRK15179 335 SREGADFFAATLA----DAGIPVSVYSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRS---SVPSVVHIW 407 (694)
T ss_pred cccCcchHHHHHH----hCCCeEEEeccCCccCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHH---cCCcEEEEe
Confidence 11111 1111111 1356666665443211000 0000000 001 111222334444443 389999999
Q ss_pred CCCchHHHHHHHHHcCCcEEE-EecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccc
Q 003985 415 YSDGNLVASLLAYKMGITQCT-IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 493 (781)
Q Consensus 415 ~~~~~lva~llar~~gvp~v~-t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v 493 (781)
.+.+++++.++++..++|+|+ +.|++...... . .++ ..|.... ..+....++.+|++|....+.+.+
T Consensus 408 ~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~~--~-~~~---~~~~~l~----~~l~~~~~~i~Vs~S~~~~~~l~~-- 475 (694)
T PRK15179 408 QDGSIFACALAALLAGVPRIVLSVRTMPPVDRP--D-RYR---VEYDIIY----SELLKMRGVALSSNSQFAAHRYAD-- 475 (694)
T ss_pred CCcHHHHHHHHHHHcCCCEEEEEeCCCccccch--h-HHH---HHHHHHH----HHHHhcCCeEEEeCcHHHHHHHHH--
Confidence 999999999999999999876 55764322111 1 111 1111111 111222345666666654331111
Q ss_pred cccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCC
Q 003985 494 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKP 573 (781)
Q Consensus 494 ~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~ 573 (781)
..|++ ..|+.|||||+|.+.|.+.+........ +....+.+.+
T Consensus 476 -----------------~~g~~--~~kI~VI~NGVd~~~f~~~~~~~~~~~~------------------~~~~~~~~~~ 518 (694)
T PRK15179 476 -----------------WLGVD--ERRIPVVYNGLAPLKSVQDDACTAMMAQ------------------FDARTSDARF 518 (694)
T ss_pred -----------------HcCCC--hhHEEEECCCcCHHhcCCCchhhHHHHh------------------hccccCCCCe
Confidence 11333 6799999999998887653322211100 1111134567
Q ss_pred EEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcC
Q 003985 574 IVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRA 653 (781)
Q Consensus 574 iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v 653 (781)
+|+++||+.+.||++.+++|++++.+..++++|+|+|+|+. .++++++++++++.++|+|+|++.
T Consensus 519 vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~~------------~~~L~~l~~~lgL~~~V~flG~~~--- 583 (694)
T PRK15179 519 TVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPL------------LESVREFAQRLGMGERILFTGLSR--- 583 (694)
T ss_pred EEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCcc------------hHHHHHHHHHcCCCCcEEEcCCcc---
Confidence 89999999999999999999999988889999999999976 678999999999999999999643
Q ss_pred ChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCH--HHHHHHHHHHHHh
Q 003985 654 RNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP--DQAAELMADFFGK 731 (781)
Q Consensus 654 ~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~--e~lA~~I~~~l~~ 731 (781)
++..+|+ .+|+||+||.+|+||++++|||+||+|||+|+.||+.|+|.++.+|++++++|. ++++++|.+++..
T Consensus 584 ---dv~~ll~-aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~ 659 (694)
T PRK15179 584 ---RVGYWLT-QFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDM 659 (694)
T ss_pred ---hHHHHHH-hcCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhC
Confidence 5778888 499999999999999999999999999999999999999999999999998874 6899999888854
Q ss_pred ccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003985 732 CKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 732 l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll 769 (781)
+..+ ..+++++++++.++|||++ +++.|.+++
T Consensus 660 l~~~----~~l~~~ar~~a~~~FS~~~--~~~~~~~lY 691 (694)
T PRK15179 660 CAAD----PGIARKAADWASARFSLNQ--MIASTVRCY 691 (694)
T ss_pred hhcc----HHHHHHHHHHHHHhCCHHH--HHHHHHHHh
Confidence 4444 4567889999999999966 556666666
No 29
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=5.7e-36 Score=328.85 Aligned_cols=274 Identities=19% Similarity=0.290 Sum_probs=224.5
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHH
Q 003985 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (781)
Q Consensus 406 ~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (781)
.+||+||+|....+..+..++++.|+|++++.|+.......... ... .+.+ ....+...++.+|.|+++|...
T Consensus 81 ~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~----~~~-~~~~--~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 81 HRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLALL----LRS-RWAL--YARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred hCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccchhh----ccc-chhH--HHHHHHHHHHhcCEEEECCHHH
Confidence 48999999987777888888999999999999975432211110 000 0111 1123445788999999999877
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccC
Q 003985 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (781)
Q Consensus 486 ~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g 565 (781)
.+.+.+ .|++ ..++.++|||+|.+.|.+...
T Consensus 154 ~~~~~~--------------------~~~~--~~~i~vi~~g~d~~~~~~~~~--------------------------- 184 (367)
T cd05844 154 RDRLLA--------------------LGFP--PEKVHVHPIGVDTAKFTPATP--------------------------- 184 (367)
T ss_pred HHHHHH--------------------cCCC--HHHeEEecCCCCHHhcCCCCC---------------------------
Confidence 552211 1332 668999999999877654311
Q ss_pred CCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003985 566 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (781)
Q Consensus 566 ~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~f 645 (781)
..+++.++++|++.+.||++.+++|+..+.+..++++|+|+|+|+. .+.++++++++++.++|+|
T Consensus 185 ---~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~~------------~~~~~~~~~~~~~~~~v~~ 249 (367)
T cd05844 185 ---ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGPL------------LAALEALARALGLGGRVTF 249 (367)
T ss_pred ---CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCchH------------HHHHHHHHHHcCCCCeEEE
Confidence 2356789999999999999999999999988788999999999865 5678889999999999999
Q ss_pred eccccCcCChHHHHHHHHccCcEEEEcCC------CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHH
Q 003985 646 IAAQTNRARNGELYRYIADTKGAFVQPAF------YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPD 719 (781)
Q Consensus 646 lG~~~~~v~~~el~~~la~aadvfV~PS~------~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e 719 (781)
+| .++.+++..+++. +|++|+||. .|+||++++|||+||+|||+|+.||..|++.++.+|+++++.|++
T Consensus 250 ~g----~~~~~~l~~~~~~-ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~ 324 (367)
T cd05844 250 LG----AQPHAEVRELMRR-ARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVA 324 (367)
T ss_pred CC----CCCHHHHHHHHHh-CCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCCHH
Confidence 99 6778899999995 999999997 599999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003985 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 720 ~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~ 759 (781)
+++++|.+++ +|++.+++++.++++++.++|||+..
T Consensus 325 ~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~~~s~~~~ 360 (367)
T cd05844 325 ALAAALGRLL----ADPDLRARMGAAGRRRVEERFDLRRQ 360 (367)
T ss_pred HHHHHHHHHH----cCHHHHHHHHHHHHHHHHHHCCHHHH
Confidence 9999998887 89999999999999999999999764
No 30
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=2.5e-35 Score=322.17 Aligned_cols=360 Identities=16% Similarity=0.178 Sum_probs=252.3
Q ss_pred EEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCC
Q 003985 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+|++.+++| |..||++.++. +|+++|.++||+|+ |+|........ ....
T Consensus 1 ~i~~i~~~~~~--------~~~gG~~~~~~--------~la~~L~~~g~~v~----v~~~~~~~~~~---------~~~~ 51 (363)
T cd04955 1 KIAIIGTRGIP--------AKYGGFETFVE--------ELAPRLVARGHEVT----VYCRSPYPKQK---------ETEY 51 (363)
T ss_pred CeEEEecCcCC--------cccCcHHHHHH--------HHHHHHHhcCCCEE----EEEccCCCCCc---------cccc
Confidence 69999999886 56799999999 77778899999999 99876432110 1122
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003985 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (781)
Q Consensus 360 ~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~ 439 (781)
.+++++++|.....+ ...+.+ . ...+...+. ...++|+||...... ..+..++++.++|++++.|+
T Consensus 52 ~~i~~~~~~~~~~~~--------~~~~~~--~-~~~~~~~~~--~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~v~~~h~ 117 (363)
T cd04955 52 NGVRLIHIPAPEIGG--------LGTIIY--D-ILAILHALF--VKRDIDHVHALGPAI-APFLPLLRLKGKKVVVNMDG 117 (363)
T ss_pred CCceEEEcCCCCccc--------hhhhHH--H-HHHHHHHHh--ccCCeEEEEecCccH-HHHHHHHHhcCCCEEEEccC
Confidence 367888877654211 000000 0 011111111 133566666555444 34445556679999999998
Q ss_pred CccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003985 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (781)
Q Consensus 440 l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~ 519 (781)
...... .|..... .+ ....+..+++.+|.||++|....+.++.. .|. +
T Consensus 118 ~~~~~~-----~~~~~~~--~~--~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-------------------~~~----~ 165 (363)
T cd04955 118 LEWKRA-----KWGRPAK--RY--LKFGEKLAVKFADRLIADSPGIKEYLKEK-------------------YGR----D 165 (363)
T ss_pred cceeec-----ccccchh--HH--HHHHHHHHHhhccEEEeCCHHHHHHHHHh-------------------cCC----C
Confidence 654321 1111100 00 11235567889999999998776532111 121 2
Q ss_pred ceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhc
Q 003985 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (781)
Q Consensus 520 k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~ 599 (781)
+ .+||||+|...+.+.... . ..++. ++++.++++||+.+.||++.+++|++++..
T Consensus 166 ~-~~i~ngv~~~~~~~~~~~---~------------------~~~~~---~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~ 220 (363)
T cd04955 166 S-TYIPYGADHVVSSEEDEI---L------------------KKYGL---EPGRYYLLVGRIVPENNIDDLIEAFSKSNS 220 (363)
T ss_pred C-eeeCCCcChhhcchhhhh---H------------------HhcCC---CCCcEEEEEecccccCCHHHHHHHHHhhcc
Confidence 2 899999998766541110 0 11332 234568899999999999999999998864
Q ss_pred cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH-HcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCC-CC
Q 003985 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK-TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY-EA 677 (781)
Q Consensus 600 ~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~-el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~-E~ 677 (781)
+++|+|+|+++. ...+.+.++ ++++.++|+|+| .++.+++..+++. +|++++||.. |+
T Consensus 221 ---~~~l~ivG~~~~------------~~~~~~~~~~~~~~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~~~e~ 280 (363)
T cd04955 221 ---GKKLVIVGNADH------------NTPYGKLLKEKAAADPRIIFVG----PIYDQELLELLRY-AALFYLHGHSVGG 280 (363)
T ss_pred ---CceEEEEcCCCC------------cchHHHHHHHHhCCCCcEEEcc----ccChHHHHHHHHh-CCEEEeCCccCCC
Confidence 799999999865 122333333 677889999999 6677899999995 9999999998 99
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcc
Q 003985 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVS 757 (781)
Q Consensus 678 fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~ 757 (781)
||++++|||+||+|||+|+.|+..|++.+ +|++++++|. ++++|..++ +|++.+.++++++++.+.++|||+
T Consensus 281 ~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~fs~~ 352 (363)
T cd04955 281 TNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEELE----ADPEEVSAMAKAARERIREKYTWE 352 (363)
T ss_pred CChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999999999999999999999965 7999988776 899997776 899999999999999999999996
Q ss_pred hhhhccchHHHH
Q 003985 758 SDGIVDPSPFVI 769 (781)
Q Consensus 758 ~~~il~~ye~ll 769 (781)
. +++.|.+++
T Consensus 353 ~--~~~~~~~~y 362 (363)
T cd04955 353 K--IADQYEELY 362 (363)
T ss_pred H--HHHHHHHHh
Confidence 6 556676665
No 31
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=100.00 E-value=1.1e-36 Score=319.75 Aligned_cols=365 Identities=16% Similarity=0.192 Sum_probs=278.7
Q ss_pred eEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecC
Q 003985 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (781)
Q Consensus 279 ~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~ 358 (781)
++|+++|+|.| |.+||++.++. .|++.|.+.||.|. ++|..+.+..|-.+-
T Consensus 1 ~~i~mVsdff~---------P~~ggveshiy--------~lSq~li~lghkVv----vithayg~r~giryl-------- 51 (426)
T KOG1111|consen 1 SRILMVSDFFY---------PSTGGVESHIY--------ALSQCLIRLGHKVV----VITHAYGNRVGIRYL-------- 51 (426)
T ss_pred CcceeeCcccc---------cCCCChhhhHH--------HhhcchhhcCCeEE----EEeccccCccceeee--------
Confidence 57999999998 56899999999 88899999999998 999998775543322
Q ss_pred CCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCch--HHHHHHHHHcCCcEEEE
Q 003985 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGN--LVASLLAYKMGITQCTI 436 (781)
Q Consensus 359 ~~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~--lva~llar~~gvp~v~t 436 (781)
+.+.+++.+|+... .+...+|.+.....-+...+.+ ++..|||+|.+.+. --+...++.+|...|+|
T Consensus 52 t~glkVyylp~~v~--------~n~tT~ptv~~~~Pllr~i~lr---E~I~ivhghs~fS~lahe~l~hartMGlktVfT 120 (426)
T KOG1111|consen 52 TNGLKVYYLPAVVG--------YNQTTFPTVFSDFPLLRPILLR---ERIEIVHGHSPFSYLAHEALMHARTMGLKTVFT 120 (426)
T ss_pred cCCceEEEEeeeee--------ecccchhhhhccCcccchhhhh---hceEEEecCChHHHHHHHHHHHHHhcCceEEEe
Confidence 33688999988752 2222333332222222223333 38999999998874 44778889999999999
Q ss_pred ecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCC
Q 003985 437 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 516 (781)
Q Consensus 437 ~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~ 516 (781)
-|++..-. ++....... .++ ..+...|.+||+|+.-.++ + .+...++
T Consensus 121 dHSlfGfa----d~~si~~n~----ll~-----~sL~~id~~IcVshtsken---t----------------vlr~~L~- 167 (426)
T KOG1111|consen 121 DHSLFGFA----DIGSILTNK----LLP-----LSLANIDRIICVSHTSKEN---T----------------VLRGALA- 167 (426)
T ss_pred cccccccc----chhhhhhcc----eee-----eeecCCCcEEEEeecCCCc---e----------------EEEeccC-
Confidence 99864422 211111111 122 3577899999999865431 1 1112233
Q ss_pred CCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHH
Q 003985 517 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 596 (781)
Q Consensus 517 f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~ 596 (781)
..|+.+|||.++.+.|.|.+.... ..+...|..++||..+||++.|++++.+
T Consensus 168 -p~kvsvIPnAv~~~~f~P~~~~~~---------------------------S~~i~~ivv~sRLvyrKGiDll~~iIp~ 219 (426)
T KOG1111|consen 168 -PAKVSVIPNAVVTHTFTPDAADKP---------------------------SADIITIVVASRLVYRKGIDLLLEIIPS 219 (426)
T ss_pred -HhHeeeccceeeccccccCccccC---------------------------CCCeeEEEEEeeeeeccchHHHHHHHHH
Confidence 679999999999999999654310 2334679999999999999999999999
Q ss_pred hhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCC
Q 003985 597 NSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 676 (781)
Q Consensus 597 l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E 676 (781)
+.+++|+++|+|+|+||. ...+++..+++.++++|.++| .++++++.+.+.+ .|+|++||+.|
T Consensus 220 vc~~~p~vrfii~GDGPk------------~i~lee~lEk~~l~~rV~~lG----~v~h~~Vr~vl~~-G~IFlntSlTE 282 (426)
T KOG1111|consen 220 VCDKHPEVRFIIIGDGPK------------RIDLEEMLEKLFLQDRVVMLG----TVPHDRVRDVLVR-GDIFLNTSLTE 282 (426)
T ss_pred HHhcCCCeeEEEecCCcc------------cchHHHHHHHhhccCceEEec----ccchHHHHHHHhc-CcEEeccHHHH
Confidence 999999999999999997 567888889999999999999 7889999999995 99999999999
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCc
Q 003985 677 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVV 756 (781)
Q Consensus 677 ~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw 756 (781)
+||++++|||+||+|||+|++||.+|++.++ -......+++++++++.+.+.++...|. .-.+++.+.|+|
T Consensus 283 afc~~ivEAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~v~~ai~~~~~~p~-------~~h~~v~~~y~w 353 (426)
T KOG1111|consen 283 AFCMVIVEAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGAVEKAITKLRTLPL-------EFHDRVKKMYSW 353 (426)
T ss_pred HHHHHHHHHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHHHHHHHHHhccCch-------hHHHHHHHhccH
Confidence 9999999999999999999999999999665 2223445799999999998877766643 346778888999
Q ss_pred chhhhccchHHHHHhc
Q 003985 757 SSDGIVDPSPFVINVI 772 (781)
Q Consensus 757 ~~~~il~~ye~ll~~~ 772 (781)
+ .++++.|+++..+
T Consensus 354 ~--dVa~rTekvy~r~ 367 (426)
T KOG1111|consen 354 K--DVAERTEKVYDRA 367 (426)
T ss_pred H--HHHHHHHHHHHHH
Confidence 4 4667777777654
No 32
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=2.6e-35 Score=326.97 Aligned_cols=286 Identities=20% Similarity=0.228 Sum_probs=210.7
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHH
Q 003985 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (781)
Q Consensus 405 ~~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (781)
..+|||||+|++....+ ..+++..++|.+++.|+..... ....|+ + ....++.+|.+++.|..
T Consensus 83 ~~~~Dvv~~h~~~~~~~-~~~~~~~~~~~i~~~H~~~~~~---~~~~~~-------~------~~~~~~~~d~~i~~~~~ 145 (372)
T cd03792 83 DLDADVVVIHDPQPLAL-PLFKKKRGRPWIWRCHIDLSSP---NRRVWD-------F------LQPYIEDYDAAVFHLPE 145 (372)
T ss_pred cCCCCEEEECCCCchhH-HHhhhcCCCeEEEEeeeecCCC---cHHHHH-------H------HHHHHHhCCEEeecHHH
Confidence 45899999998775332 2223334899999999743211 111121 1 12456789999988843
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCC--CCcHHHHHHhhhhcchhhhccCcccccc
Q 003985 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYF--PYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (781)
Q Consensus 485 ~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~--p~~~~~~rl~~~~~~i~~~l~~~~~~~~ 562 (781)
.+. .++. ..++ +||||+|..... +........ .++
T Consensus 146 ~~~------------------------~~~~--~~~~-vipngvd~~~~~~~~~~~~~~~~----------------~~~ 182 (372)
T cd03792 146 YVP------------------------PQVP--PRKV-IIPPSIDPLSGKNRELSPADIEY----------------ILE 182 (372)
T ss_pred hcC------------------------CCCC--CceE-EeCCCCCCCccccCCCCHHHHHH----------------HHH
Confidence 321 0121 3455 999999975322 221111110 012
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003985 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~ 642 (781)
.+|+ ++++++|+++||+++.||++.+++|++.+.+..++++|+|+|+|+.. +++ ..+.++++.++.++.++
T Consensus 183 ~~~~--~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~----~~~---~~~~~~~~~~~~~~~~~ 253 (372)
T cd03792 183 KYGI--DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATD----DPE---GWIVYEEVLEYAEGDPD 253 (372)
T ss_pred HhCC--CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCC----Cch---hHHHHHHHHHHhCCCCC
Confidence 3565 56789999999999999999999999999887789999999999651 111 12334555556778889
Q ss_pred EEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHH
Q 003985 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAA 722 (781)
Q Consensus 643 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA 722 (781)
|.|+|... ++.+++..+++ ++|+||+||.+|+||++++|||+||+|||+|+.||..++|.++.+|++++ ++++++
T Consensus 254 v~~~~~~~--~~~~~~~~~~~-~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~~a 328 (372)
T cd03792 254 IHVLTLPP--VSDLEVNALQR-ASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEEAA 328 (372)
T ss_pred eEEEecCC--CCHHHHHHHHH-hCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHHHH
Confidence 99999432 36788889998 59999999999999999999999999999999999999999999999987 567888
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003985 723 ELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 723 ~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll~ 770 (781)
++|.+++ .|++.+++|+++|++.+.++|||+. +++.|.++++
T Consensus 329 ~~i~~ll----~~~~~~~~~~~~a~~~~~~~~s~~~--~~~~~~~~~~ 370 (372)
T cd03792 329 VRILYLL----RDPELRRKMGANAREHVRENFLITR--HLKDYLYLIS 370 (372)
T ss_pred HHHHHHH----cCHHHHHHHHHHHHHHHHHHcCHHH--HHHHHHHHHH
Confidence 8888777 8999999999999999999999965 5566776664
No 33
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=100.00 E-value=2.3e-34 Score=311.29 Aligned_cols=366 Identities=18% Similarity=0.197 Sum_probs=259.1
Q ss_pred EEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCC
Q 003985 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||++++++.+ |..||.+.++. +|++.|.++||+|+ ++|......... ....
T Consensus 1 kIl~i~~~~~---------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~~~~-- 51 (375)
T cd03821 1 KILHVIPSFD---------PKYGGPVRVVL--------NLSKALAKLGHEVT----VATTDAGGDPLL------VALN-- 51 (375)
T ss_pred CeEEEcCCCC---------cccCCeehHHH--------HHHHHHHhcCCcEE----EEecCCCCccch------hhcc--
Confidence 6899987654 56899999999 77778899999999 887653321110 0000
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHH-HHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcEEEE
Q 003985 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLE-TFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQCTI 436 (781)
Q Consensus 360 ~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~-~f~~~~~~~i~~~l~~~pDIIh~~~~~~--~lva~llar~~gvp~v~t 436 (781)
+........... ....... .+..... ........+||+||+|.... ...+...++..++|++++
T Consensus 52 -~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~-~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~ 118 (375)
T cd03821 52 -GVPVKLFSINVA-----------YGLNLARYLFPPSLL-AWLRLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVS 118 (375)
T ss_pred -Cceeeecccchh-----------hhhhhhhhccChhHH-HHHHHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEE
Confidence 000000000000 0000000 0111111 11112245899999987433 556667777889999999
Q ss_pred ecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCC
Q 003985 437 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 516 (781)
Q Consensus 437 ~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~ 516 (781)
.|+.......... .++ +....+......++.++.++++|......... + .
T Consensus 119 ~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~---------------------~--~ 168 (375)
T cd03821 119 PHGMLDPWALPHK-ALK------KRLAWFLFERRLLQAAAAVHATSEQEAAEIRR---------------------L--G 168 (375)
T ss_pred ccccccccccccc-hhh------hHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh---------------------h--C
Confidence 9986432211000 111 01111223456788899999999766442110 1 1
Q ss_pred CCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHH
Q 003985 517 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 596 (781)
Q Consensus 517 f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~ 596 (781)
+..++.++|||+|.+.+.+......+ ..++. +.++++|+++||+.+.||++.+++++.+
T Consensus 169 ~~~~~~vi~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~ 227 (375)
T cd03821 169 LKAPIAVIPNGVDIPPFAALPSRGRR-------------------RKFPI--LPDKRIILFLGRLHPKKGLDLLIEAFAK 227 (375)
T ss_pred CcccEEEcCCCcChhccCcchhhhhh-------------------hhccC--CCCCcEEEEEeCcchhcCHHHHHHHHHH
Confidence 25689999999999887664432211 12333 5678899999999999999999999999
Q ss_pred hhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCC
Q 003985 597 NSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 676 (781)
Q Consensus 597 l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E 676 (781)
+.+.+++++|+++|.+.. .+...++.+++++++.++|.|+| .++.+++..+++. +|++|+||..|
T Consensus 228 l~~~~~~~~l~i~G~~~~----------~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~e 292 (375)
T cd03821 228 LAERFPDWHLVIAGPDEG----------GYRAELKQIAAALGLEDRVTFTG----MLYGEDKAAALAD-ADLFVLPSHSE 292 (375)
T ss_pred hhhhcCCeEEEEECCCCc----------chHHHHHHHHHhcCccceEEEcC----CCChHHHHHHHhh-CCEEEeccccC
Confidence 988888999999998765 23455666678899999999999 6667899999995 99999999999
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCc
Q 003985 677 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVV 756 (781)
Q Consensus 677 ~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw 756 (781)
+||++++|||+||+|||+|+.||..|++.+ .+|++++. +.++++++|.+++ ++++.++++++++++.+.++|||
T Consensus 293 ~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~ 366 (375)
T cd03821 293 NFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVDALAAALRRAL----ELPQRLKAMGENGRALVEERFSW 366 (375)
T ss_pred CCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCH
Confidence 999999999999999999999999999988 88998875 5599999998877 89999999999999999999999
Q ss_pred chh
Q 003985 757 SSD 759 (781)
Q Consensus 757 ~~~ 759 (781)
+..
T Consensus 367 ~~~ 369 (375)
T cd03821 367 TAI 369 (375)
T ss_pred HHH
Confidence 764
No 34
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=6.6e-34 Score=309.80 Aligned_cols=353 Identities=18% Similarity=0.238 Sum_probs=257.2
Q ss_pred EEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCC
Q 003985 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++++..+ |+.||.+.++. +|+++|.++||+|+ |++......... . ..
T Consensus 1 kil~i~~~~~---------p~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~---~~ 50 (357)
T cd03795 1 RVLHVGKFYP---------PDRGGIEQVIR--------DLAEGLAARGIEVA----VLCASPEPKGRD------E---ER 50 (357)
T ss_pred CeeEecCCCC---------CCCCcHHHHHH--------HHHHHHHhCCCceE----EEecCCCCcchh------h---hc
Confidence 6899986554 56899999999 77788899999999 887653322111 0 11
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003985 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (781)
Q Consensus 360 ~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~ 439 (781)
.+..+.+++...... ..+.... ....+. ....+||+||+|++.............++|.+.+.|+
T Consensus 51 ~~~~~~~~~~~~~~~----------~~~~~~~----~~~~~~-~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 115 (357)
T cd03795 51 NGHRVIRAPSLLNVA----------STPFSPS----FFKQLK-KLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHS 115 (357)
T ss_pred cCceEEEeecccccc----------cccccHH----HHHHHH-hcCCCCCEEEEecCcchHHHHHHHhccCceEEEEEcC
Confidence 234555554432100 0010001 111111 2245899999998765333333333368999999996
Q ss_pred CccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003985 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (781)
Q Consensus 440 l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~ 519 (781)
..... ... ...|+ ..+...++.||.++++|......... +..+..
T Consensus 116 ~~~~~----~~~----~~~~~-----~~~~~~~~~~d~vi~~s~~~~~~~~~----------------------~~~~~~ 160 (357)
T cd03795 116 DIVKQ----KLL----LKLYR-----PLQRRFLRRADAIVATSPNYAETSPV----------------------LRRFRD 160 (357)
T ss_pred hhhcc----chh----hhhhh-----HHHHHHHHhcCEEEeCcHHHHHHHHH----------------------hcCCcc
Confidence 32211 001 11111 12345789999999999876542111 011136
Q ss_pred ceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhc
Q 003985 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (781)
Q Consensus 520 k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~ 599 (781)
++.+||||+|.+.+.+....... .... +.++++|+++||+.+.||++.+++|++++.
T Consensus 161 ~~~~i~~gi~~~~~~~~~~~~~~--------------------~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~- 217 (357)
T cd03795 161 KVRVIPLGLDPARYPRPDALEEA--------------------IWRR--AAGRPFFLFVGRLVYYKGLDVLLEAAAALP- 217 (357)
T ss_pred ceEEecCCCChhhcCCcchhhhH--------------------hhcC--CCCCcEEEEecccccccCHHHHHHHHHhcc-
Confidence 88999999999877654322110 0111 456789999999999999999999999886
Q ss_pred cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCC
Q 003985 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEA 677 (781)
Q Consensus 600 ~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~ 677 (781)
+++|+|+|+|+. ...+.++++++++.++|.|+| .++.+++..+++. +|++++||. .|+
T Consensus 218 ---~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~V~~~g----~v~~~~~~~~~~~-ad~~i~ps~~~~e~ 277 (357)
T cd03795 218 ---DAPLVIVGEGPL------------EAELEALAAALGLLDRVRFLG----RLDDEEKAALLAA-CDVFVFPSVERSEA 277 (357)
T ss_pred ---CcEEEEEeCChh------------HHHHHHHHHhcCCcceEEEcC----CCCHHHHHHHHHh-CCEEEeCCcccccc
Confidence 699999999965 567888888899999999999 6777899999995 999999996 599
Q ss_pred CcHHHHHHHHcCCcEEEcCcccccccccc-CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCc
Q 003985 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEH-GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVV 756 (781)
Q Consensus 678 fGltvlEAMa~GlPVIaT~~GG~~EiI~d-g~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw 756 (781)
||++++|||+||+|||+|+.|+..+.+.+ +.+|++++++|+++++++|.+++ +|++.+++|+++|++.+.++|||
T Consensus 278 ~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~ 353 (357)
T cd03795 278 FGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLL----EDPELRERLGEAARERAEEEFTA 353 (357)
T ss_pred cchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHhcch
Confidence 99999999999999999999999998886 89999999999999999998887 89999999999999999999999
Q ss_pred chh
Q 003985 757 SSD 759 (781)
Q Consensus 757 ~~~ 759 (781)
+.+
T Consensus 354 ~~~ 356 (357)
T cd03795 354 DRM 356 (357)
T ss_pred Hhh
Confidence 765
No 35
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=9.6e-34 Score=308.25 Aligned_cols=268 Identities=21% Similarity=0.293 Sum_probs=221.4
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCH
Q 003985 405 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 483 (781)
Q Consensus 405 ~~~pDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 483 (781)
..+||+||+|+... ..++.+.++..++|++++.|+....... .. ......++.+|.++++|.
T Consensus 77 ~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---------------~~~~~~~~~~~~vi~~s~ 139 (355)
T cd03799 77 RLGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSP--DA---------------IDLDEKLARADFVVAISE 139 (355)
T ss_pred hcCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccC--ch---------------HHHHHHHhhCCEEEECCH
Confidence 35899999998754 4555566666689999999964321110 00 123457889999999999
Q ss_pred HHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccc
Q 003985 484 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 563 (781)
Q Consensus 484 ~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~ 563 (781)
...+.++.. .|.. ..++.++|||+|.+.+.+...
T Consensus 140 ~~~~~l~~~-------------------~~~~--~~~~~vi~~~~d~~~~~~~~~------------------------- 173 (355)
T cd03799 140 YNRQQLIRL-------------------LGCD--PDKIHVVHCGVDLERFPPRPP------------------------- 173 (355)
T ss_pred HHHHHHHHh-------------------cCCC--cccEEEEeCCcCHHHcCCccc-------------------------
Confidence 876632221 0222 678999999999877654320
Q ss_pred cCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 003985 564 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 643 (781)
Q Consensus 564 ~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V 643 (781)
. ...+++.|+++|++.+.||++.+++++.++.+..++++|+++|+++. .+.+++.++++++.++|
T Consensus 174 ~---~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v 238 (355)
T cd03799 174 P---PPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPL------------RDELEALIAELGLEDRV 238 (355)
T ss_pred c---ccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCcc------------HHHHHHHHHHcCCCCeE
Confidence 0 03456789999999999999999999999988778999999999976 56788889999999999
Q ss_pred EEeccccCcCChHHHHHHHHccCcEEEEcCCC------CCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCC
Q 003985 644 RWIAAQTNRARNGELYRYIADTKGAFVQPAFY------EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYH 717 (781)
Q Consensus 644 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~------E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d 717 (781)
+|.| .++.+++..+++. +|++++||.. |+||++++|||+||+|||+|+.|+..|++.++.+|++++++|
T Consensus 239 ~~~g----~~~~~~l~~~~~~-adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~ 313 (355)
T cd03799 239 TLLG----AKSQEEVRELLRA-ADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGD 313 (355)
T ss_pred EECC----cCChHHHHHHHHh-CCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCC
Confidence 9999 6677899999995 9999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003985 718 PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 718 ~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~ 759 (781)
+++++++|.+++ .|++.+.+++++|++++.++|||+..
T Consensus 314 ~~~l~~~i~~~~----~~~~~~~~~~~~a~~~~~~~~s~~~~ 351 (355)
T cd03799 314 PEALADAIERLL----DDPELRREMGEAGRARVEEEFDIRKQ 351 (355)
T ss_pred HHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 999999998887 79999999999999999999999775
No 36
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=100.00 E-value=3.2e-34 Score=313.16 Aligned_cols=349 Identities=15% Similarity=0.165 Sum_probs=252.3
Q ss_pred EEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCC
Q 003985 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++++.. ..||.+.++. +++++|.+.||+|+ ++|...... ...... ..
T Consensus 1 kIl~~~~~~-----------~~GG~~~~~~--------~l~~~L~~~~~~v~----~i~~~~~~~---~~~~~~----~~ 50 (358)
T cd03812 1 KILHIVGTM-----------NRGGIETFIM--------NYYRNLDRSKIQFD----FLVTSKEEG---DYDDEI----EK 50 (358)
T ss_pred CEEEEeCCC-----------CCccHHHHHH--------HHHHhcCccceEEE----EEEeCCCCc---chHHHH----HH
Confidence 688887543 3699999999 66677788999999 887653221 001011 11
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE-EEEec
Q 003985 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ-CTIAH 438 (781)
Q Consensus 360 ~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~-v~t~H 438 (781)
.+..+++++.... ..+. +...+.+.+. ..+||+||+|......++.++++..+.|. +.+.|
T Consensus 51 ~~~~~~~~~~~~~-----------~~~~----~~~~~~~~~~---~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 112 (358)
T cd03812 51 LGGKIYYIPARKK-----------NPLK----YFKKLYKLIK---KNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSH 112 (358)
T ss_pred cCCeEEEecCCCc-----------cHHH----HHHHHHHHHh---cCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEec
Confidence 2456666544321 1121 2222233232 34899999999887777777777788775 45677
Q ss_pred CCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003985 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~ 518 (781)
.............+. ...+...++.+|.++++|......+... ...
T Consensus 113 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~i~~s~~~~~~~~~~-----------------------~~~ 158 (358)
T cd03812 113 NTSDSHDKKKKILKY-----------KVLRKLINRLATDYLACSEEAGKWLFGK-----------------------VKN 158 (358)
T ss_pred cccccccccchhhHH-----------HHHHHHHHhcCCEEEEcCHHHHHHHHhC-----------------------CCc
Confidence 654332111110000 1123456788999999998775521110 125
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003985 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.+||||+|.+.|.+........ ...+. ..++++|+++||+.+.||++.++++++++.
T Consensus 159 ~~~~vi~ngvd~~~~~~~~~~~~~~------------------~~~~~--~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~ 218 (358)
T cd03812 159 KKFKVIPNGIDLEKFIFNEEIRKKR------------------RELGI--LEDKFVIGHVGRFSEQKNHEFLIEIFAELL 218 (358)
T ss_pred ccEEEEeccCcHHHcCCCchhhhHH------------------HHcCC--CCCCEEEEEEeccccccChHHHHHHHHHHH
Confidence 7899999999998876654322211 11233 467889999999999999999999999999
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCC
Q 003985 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (781)
Q Consensus 599 ~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 678 (781)
+..++++++|+|+|+. .+.+++.++++++.++|.|+|. .+++..+++. +|++|+||..|+|
T Consensus 219 ~~~~~~~l~ivG~g~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~v~ps~~E~~ 279 (358)
T cd03812 219 KKNPNAKLLLVGDGEL------------EEEIKKKVKELGLEDKVIFLGV------RNDVPELLQA-MDVFLFPSLYEGL 279 (358)
T ss_pred HhCCCeEEEEEeCCch------------HHHHHHHHHhcCCCCcEEEecc------cCCHHHHHHh-cCEEEecccccCC
Confidence 8889999999999976 5678888999999999999995 3467888885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc
Q 003985 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERL 754 (781)
Q Consensus 679 GltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~y 754 (781)
|++++|||+||+|||+|+.||..|++.+ ..|++..++++++++++|.+++ +||+.++.++..+.......+
T Consensus 280 ~~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~----~~~~~~~~~~~~~~~~~~~~~ 350 (358)
T cd03812 280 PLVLIEAQASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLK----SEDRRERSSESIKKKGLDADD 350 (358)
T ss_pred CHHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHH----hCcchhhhhhhhhhccchhhh
Confidence 9999999999999999999999999988 5677777778999999998887 899999998888877664433
No 37
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=2.1e-33 Score=304.72 Aligned_cols=382 Identities=18% Similarity=0.246 Sum_probs=270.3
Q ss_pred EEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCC
Q 003985 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++|++.+ |..||...++. .++++|+++||+|+ +++............. ......
T Consensus 1 kIl~i~~~~~---------~~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~~~~~--~~~~~~ 57 (394)
T cd03794 1 KILILSQYFP---------PELGGGAFRTT--------ELAEELVKRGHEVT----VITGSPNYPSGKIYKG--YKREEV 57 (394)
T ss_pred CEEEEecccC---------CccCCcceeHH--------HHHHHHHhCCceEE----EEecCCCccccccccc--ceEEec
Confidence 6899997665 34589999999 77777899999999 8876643322111000 011122
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcEEEEe
Q 003985 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQCTIA 437 (781)
Q Consensus 360 ~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~--~lva~llar~~gvp~v~t~ 437 (781)
.++++++++...... ..++.+ +..+ ..+.......+.. ...+||+||++++.. ...+..+++..++|.+++.
T Consensus 58 ~~~~~~~~~~~~~~~--~~~~~~--~~~~-~~~~~~~~~~~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 131 (394)
T cd03794 58 DGVRVHRVPLPPYKK--NGLLKR--LLNY-LSFALSALLALLK-RRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEV 131 (394)
T ss_pred CCeEEEEEecCCCCc--cchHHH--HHhh-hHHHHHHHHHHHh-cccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEe
Confidence 357777776654321 000000 1111 1222222333321 245899999998432 5666677777799999999
Q ss_pred cCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003985 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (781)
Q Consensus 438 H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f 517 (781)
|+.+............. ...+.+.. ..+...++.+|.++++|....+.+. ..++.
T Consensus 132 h~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~d~vi~~s~~~~~~~~--------------------~~~~~-- 186 (394)
T cd03794 132 RDLWPESAVALGLLKNG-SLLYRLLR--KLERLIYRRADAIVVISPGMREYLV--------------------RRGVP-- 186 (394)
T ss_pred hhhcchhHHHccCcccc-chHHHHHH--HHHHHHHhcCCEEEEECHHHHHHHH--------------------hcCCC--
Confidence 98754322111000000 00001111 2355678999999999988765221 01222
Q ss_pred CCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHh
Q 003985 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (781)
Q Consensus 518 ~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l 597 (781)
..++.++|||+|...+.+......+ ...+. ..++++|+++|++.+.||++.+++++.++
T Consensus 187 ~~~~~~i~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~l 245 (394)
T cd03794 187 PEKISVIPNGVDLELFKPPPADESL-------------------RKELG--LDDKFVVLYAGNIGRAQGLDTLLEAAALL 245 (394)
T ss_pred cCceEEcCCCCCHHHcCCccchhhh-------------------hhccC--CCCcEEEEEecCcccccCHHHHHHHHHHH
Confidence 6799999999998777654432211 01111 45678899999999999999999999999
Q ss_pred hccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCC
Q 003985 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (781)
Q Consensus 598 ~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 677 (781)
.+. ++++|+|+|+|+. .+.+.+++...++ ++|.|+| .++.+++..+++. +|++++|+..|+
T Consensus 246 ~~~-~~~~l~i~G~~~~------------~~~~~~~~~~~~~-~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~ 306 (394)
T cd03794 246 KDR-PDIRFLIVGDGPE------------KEELKELAKALGL-DNVTFLG----RVPKEELPELLAA-ADVGLVPLKPGP 306 (394)
T ss_pred hhc-CCeEEEEeCCccc------------HHHHHHHHHHcCC-CcEEEeC----CCChHHHHHHHHh-hCeeEEeccCcc
Confidence 876 7899999999876 5566666666666 5799999 6677899999995 999999999887
Q ss_pred C-----cHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH
Q 003985 678 F-----GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (781)
Q Consensus 678 f-----GltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~ 752 (781)
+ |++++|||+||+|||+|+.+|..+++.++.+|++++++|+++++++|.+++ .|++.++++++++++.+.+
T Consensus 307 ~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~ 382 (394)
T cd03794 307 AFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELL----DDPEERAEMGENGRRYVEE 382 (394)
T ss_pred cccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 5 888999999999999999999999999989999999999999999998887 8999999999999999999
Q ss_pred hcCcchh
Q 003985 753 RLVVSSD 759 (781)
Q Consensus 753 ~ysw~~~ 759 (781)
+|||+..
T Consensus 383 ~~s~~~~ 389 (394)
T cd03794 383 KFSREKL 389 (394)
T ss_pred hhcHHHH
Confidence 9999765
No 38
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=100.00 E-value=4.1e-33 Score=301.89 Aligned_cols=360 Identities=19% Similarity=0.282 Sum_probs=258.7
Q ss_pred EEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCC
Q 003985 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||++++...+ |..||...++. .|+++|.++||+|+ ++|...+...... ..
T Consensus 1 kil~~~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~---------~~ 50 (374)
T cd03817 1 KIGIFTDTYL---------PQVNGVATSIR--------RLAEELEKRGHEVY----VVAPSYPGAPEEE---------EV 50 (374)
T ss_pred CeeEeehhcc---------CCCCCeehHHH--------HHHHHHHHcCCeEE----EEeCCCCCCCccc---------cc
Confidence 6899986543 67899999998 78888899999999 8887644321110 00
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEec
Q 003985 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 360 ~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~-~lva~llar~~gvp~v~t~H 438 (781)
......+.+... ..+.... ..+...+...+. ..+||+||++.... +..+..++++.++|++.+.|
T Consensus 51 ~~~~~~~~~~~~--------~~~~~~~---~~~~~~~~~~~~---~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 116 (374)
T cd03817 51 VVVRPFRVPTFK--------YPDFRLP---LPIPRALIIILK---ELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYH 116 (374)
T ss_pred ccccccccccch--------hhhhhcc---ccHHHHHHHHHh---hcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEec
Confidence 011111111110 0000000 011111222222 34899999998654 56677888899999999999
Q ss_pred CCccccCCCChhhHhhhhccccchhhh-hHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003985 439 ALEKTKYPDSDIYWKKFDEKYHFSCQF-TADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~-~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f 517 (781)
+..... .... ............ ..+...++.||.+++.|....+..++ + +.
T Consensus 117 ~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~----~----------------~~--- 168 (374)
T cd03817 117 TMYEDY-THYV----PLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIADLLRE----Y----------------GV--- 168 (374)
T ss_pred CCHHHH-HHHH----hcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHHHHHh----c----------------CC---
Confidence 864311 0000 000000000001 24556788999999999876542111 1 22
Q ss_pred CCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHh
Q 003985 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (781)
Q Consensus 518 ~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l 597 (781)
..++.++|||+|.+.+.+......+ ..++. +.++++|+++|++.+.||++.+++++.++
T Consensus 169 ~~~~~vi~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~~ 227 (374)
T cd03817 169 KRPIEVIPTGIDLDRFEPVDGDDER-------------------RKLGI--PEDEPVLLYVGRLAKEKNIDFLIRAFARL 227 (374)
T ss_pred CCceEEcCCccchhccCccchhHHH-------------------HhcCC--CCCCeEEEEEeeeecccCHHHHHHHHHHH
Confidence 3468999999999887665433221 12333 45678899999999999999999999999
Q ss_pred hccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCC
Q 003985 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (781)
Q Consensus 598 ~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 677 (781)
.+..++++|+++|+++. .+.++++++++++.++|.|+| .++.+++..+++. +|++++|+..|+
T Consensus 228 ~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~l~~s~~e~ 290 (374)
T cd03817 228 LKEEPDVKLVIVGDGPE------------REELEELARELGLADRVIFTG----FVPREELPDYYKA-ADLFVFASTTET 290 (374)
T ss_pred HHhCCCeEEEEEeCCch------------HHHHHHHHHHcCCCCcEEEec----cCChHHHHHHHHH-cCEEEecccccC
Confidence 87778999999999876 567888888999999999999 6677899999995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc
Q 003985 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERL 754 (781)
Q Consensus 678 fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~y 754 (781)
+|++++|||+||+|||+|+.|+..|++.++.+|+++++.|. +++++|.+++ ++++.+++|++++++.+.+.+
T Consensus 291 ~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~ 362 (374)
T cd03817 291 QGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLL----QDPELRRRLSKNAEESAEKFS 362 (374)
T ss_pred cChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHH----hChHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998887 8999998777 899999999999999996543
No 39
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=3.4e-33 Score=302.26 Aligned_cols=332 Identities=16% Similarity=0.176 Sum_probs=235.9
Q ss_pred eEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecC
Q 003985 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (781)
Q Consensus 279 ~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~ 358 (781)
|||+++++..+| .+.|..||.++++. +|++.|.++||+|+ +++........ ..
T Consensus 1 MkI~~i~~~~~~-----~~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~-----~~----- 53 (335)
T cd03802 1 MRIALVAPPREP-----VPPPAYGGTERVVA--------ALTEGLVARGHEVT----LFASGDSKTAA-----PL----- 53 (335)
T ss_pred CeEEEEcCCccc-----CCCcccCcHHHHHH--------HHHHHHHhcCceEE----EEecCCCCccc-----ce-----
Confidence 799999976654 23467899999999 77777899999999 88865332110 00
Q ss_pred CCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEec
Q 003985 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 359 ~~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H 438 (781)
......+.. ................+.+.+. ..+||+||+|....... +++..++|+|++.|
T Consensus 54 ---~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~---~~~~Divh~~~~~~~~~---~~~~~~~~~v~~~h 115 (335)
T cd03802 54 ---VPVVPEPLR---------LDAPGRDRAEAEALALAERALA---AGDFDIVHNHSLHLPLP---FARPLPVPVVTTLH 115 (335)
T ss_pred ---eeccCCCcc---------cccchhhHhhHHHHHHHHHHHh---cCCCCEEEecCcccchh---hhcccCCCEEEEec
Confidence 001000000 0000000111122222222232 35899999999887554 56778999999999
Q ss_pred CCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003985 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~ 518 (781)
+....... + ........+.++++|...... + .. .
T Consensus 116 ~~~~~~~~-----~---------------~~~~~~~~~~~~~~s~~~~~~-------------------~-----~~--~ 149 (335)
T cd03802 116 GPPDPELL-----K---------------LYYAARPDVPFVSISDAQRRP-------------------W-----PP--L 149 (335)
T ss_pred CCCCcccc-----h---------------HHHhhCcCCeEEEecHHHHhh-------------------c-----cc--c
Confidence 76432210 0 113456778889999876441 0 01 1
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003985 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.+||||+|.+.|.+. ..+++.|+++||+.+.||++.+++++++
T Consensus 150 ~~~~vi~ngvd~~~~~~~--------------------------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~-- 195 (335)
T cd03802 150 PWVATVHNGIDLDDYPFR--------------------------------GPKGDYLLFLGRISPEKGPHLAIRAARR-- 195 (335)
T ss_pred cccEEecCCcChhhCCCC--------------------------------CCCCCEEEEEEeeccccCHHHHHHHHHh--
Confidence 588899999998877541 2346689999999999999999999865
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC-CCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC-CC
Q 003985 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK-LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-YE 676 (781)
Q Consensus 599 ~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~-L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-~E 676 (781)
.+++|+|+|+++. .+.+...+.+.. +.++|.|+| .++..++..+++. +|++|+||. .|
T Consensus 196 ---~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~G----~~~~~~~~~~~~~-~d~~v~ps~~~E 255 (335)
T cd03802 196 ---AGIPLKLAGPVSD------------PDYFYREIAPELLDGPDIEYLG----EVGGAEKAELLGN-ARALLFPILWEE 255 (335)
T ss_pred ---cCCeEEEEeCCCC------------HHHHHHHHHHhcccCCcEEEeC----CCCHHHHHHHHHh-CcEEEeCCcccC
Confidence 3689999999976 233444444443 568999999 5667899999995 999999997 59
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCc
Q 003985 677 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVV 756 (781)
Q Consensus 677 ~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw 756 (781)
+||++++|||+||+|||+|+.||..|++.++.+|+++++ +++++++|.++. ..+ .+++++++.++|||
T Consensus 256 ~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~----~~~------~~~~~~~~~~~~s~ 323 (335)
T cd03802 256 PFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARAD----RLD------RAACRRRAERRFSA 323 (335)
T ss_pred CcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHh----ccH------HHHHHHHHHHhCCH
Confidence 999999999999999999999999999999999999986 999999997764 332 34678888999999
Q ss_pred chhhhccchHHHH
Q 003985 757 SSDGIVDPSPFVI 769 (781)
Q Consensus 757 ~~~~il~~ye~ll 769 (781)
+. +++.|.+++
T Consensus 324 ~~--~~~~~~~~y 334 (335)
T cd03802 324 AR--MVDDYLALY 334 (335)
T ss_pred HH--HHHHHHHHh
Confidence 65 556666654
No 40
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=3.2e-33 Score=303.00 Aligned_cols=362 Identities=19% Similarity=0.237 Sum_probs=257.0
Q ss_pred EEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCC
Q 003985 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++++... |..||.+.++. .|+++|.++||+|+ ++|......... ..
T Consensus 1 kIl~i~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~--~~-------- 49 (364)
T cd03814 1 RIAIVTDTFL---------PQVNGVVRTLQ--------RLVEHLRARGHEVL----VIAPGPFRESEG--PA-------- 49 (364)
T ss_pred CeEEEecccC---------ccccceehHHH--------HHHHHHHHCCCEEE----EEeCCchhhccC--CC--------
Confidence 6899996554 45699999999 77888899999999 888664321110 00
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEec
Q 003985 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 360 ~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~-~lva~llar~~gvp~v~t~H 438 (781)
....+...+......+ +..+. ....+.+.+. ..+||+||++.... +..+..++++.++|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~~------~~~~~-----~~~~~~~~~~---~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 115 (364)
T cd03814 50 RVVPVPSVPLPGYPEI------RLALP-----PRRRVRRLLD---AFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYH 115 (364)
T ss_pred CceeecccccCcccce------Eeccc-----chhhHHHHHH---hcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEe
Confidence 1122222221111110 00000 0112222232 34899999886654 56777888889999999999
Q ss_pred CCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003985 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~ 518 (781)
+......... ...... .+. ........+.+|.+++.|....+... ... .
T Consensus 116 ~~~~~~~~~~--~~~~~~---~~~--~~~~~~~~~~~d~i~~~s~~~~~~~~----------------------~~~--~ 164 (364)
T cd03814 116 TDFPEYLRYY--GLGPLS---WLA--WAYLRWFHNRADRVLVPSPSLADELR----------------------ARG--F 164 (364)
T ss_pred cChHHHhhhc--ccchHh---Hhh--HHHHHHHHHhCCEEEeCCHHHHHHHh----------------------ccC--C
Confidence 7543211000 000000 000 12234567899999999987754100 011 4
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003985 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.+++||+|.+.|.+........ ..++ ..++++|+++||+.+.||++.+++++.++.
T Consensus 165 ~~~~~~~~g~~~~~~~~~~~~~~~~------------------~~~~---~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~ 223 (364)
T cd03814 165 RRVRLWPRGVDTELFHPRRRDEALR------------------ARLG---PPDRPVLLYVGRLAPEKNLEALLDADLPLR 223 (364)
T ss_pred CceeecCCCccccccCcccccHHHH------------------HHhC---CCCCeEEEEEeccccccCHHHHHHHHHHhh
Confidence 5889999999998887654332211 1122 345678999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCC
Q 003985 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (781)
Q Consensus 599 ~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 678 (781)
+. ++++|+|+|+++. ...++ +..++|.|+| .++.+++..+++. +|++++||..|+|
T Consensus 224 ~~-~~~~l~i~G~~~~------------~~~~~------~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~~s~~e~~ 279 (364)
T cd03814 224 RR-PPVRLVIVGDGPA------------RARLE------ARYPNVHFLG----FLDGEELAAAYAS-ADVFVFPSRTETF 279 (364)
T ss_pred hc-CCceEEEEeCCch------------HHHHh------ccCCcEEEEe----ccCHHHHHHHHHh-CCEEEECcccccC
Confidence 77 8899999999866 22332 4567899999 5678899999995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcch
Q 003985 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSS 758 (781)
Q Consensus 679 GltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~ 758 (781)
|++++|||+||+|||+++.|+..|+++++.+|++++++|.++++++|.+++ .|++.++++++++++.+ ++|+|+.
T Consensus 280 ~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~~~~~ 354 (364)
T cd03814 280 GLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALL----ADPELRRRMAARARAEA-ERRSWEA 354 (364)
T ss_pred CcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-hhcCHHH
Confidence 999999999999999999999999999999999999999999999998887 89999999999999999 8899966
Q ss_pred hhhccchHHHH
Q 003985 759 DGIVDPSPFVI 769 (781)
Q Consensus 759 ~~il~~ye~ll 769 (781)
. .+.+.+++
T Consensus 355 ~--~~~~~~~~ 363 (364)
T cd03814 355 F--LDNLLEAY 363 (364)
T ss_pred H--HHHHHHhh
Confidence 4 45555543
No 41
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=100.00 E-value=8.5e-33 Score=296.09 Aligned_cols=373 Identities=22% Similarity=0.327 Sum_probs=269.8
Q ss_pred EEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCC
Q 003985 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++++... |..||...++. .|++.|.+.||+|. +++.......... ....
T Consensus 1 kI~ii~~~~~---------~~~~G~~~~~~--------~l~~~L~~~g~~v~----i~~~~~~~~~~~~------~~~~- 52 (374)
T cd03801 1 KILLVTPEYP---------PSVGGAERHVL--------ELARALAARGHEVT----VLTPGDGGLPDEE------EVGG- 52 (374)
T ss_pred CeeEEecccC---------CccCcHhHHHH--------HHHHHHHhcCceEE----EEecCCCCCCcee------eecC-
Confidence 6899987654 33689999999 77778889999999 8877643321110 0000
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003985 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (781)
Q Consensus 360 ~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~ 439 (781)
......+... ..........+...+...+. ..+||+||+++..........++..++|++++.|+
T Consensus 53 --~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 117 (374)
T cd03801 53 --IVVVRPPPLL----------RVRRLLLLLLLALRLRRLLR---RERFDVVHAHDWLALLAAALAARLLGIPLVLTVHG 117 (374)
T ss_pred --cceecCCccc----------ccchhHHHHHHHHHHHHHhh---hcCCcEEEEechhHHHHHHHHHHhcCCcEEEEecc
Confidence 0000000000 00011111122222333333 34899999999887665557788889999999998
Q ss_pred CccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003985 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (781)
Q Consensus 440 l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~ 519 (781)
......... .. . ............++.+|.+++.|....+...+. .+.. ..
T Consensus 118 ~~~~~~~~~---~~-~----~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~-------------------~~~~--~~ 168 (374)
T cd03801 118 LEFGRPGNE---LG-L----LLKLARALERRALRRADRIIAVSEATREELREL-------------------GGVP--PE 168 (374)
T ss_pred chhhccccc---hh-H----HHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhc-------------------CCCC--CC
Confidence 765432211 00 0 000111234567889999999998776522211 1111 35
Q ss_pred ceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhc
Q 003985 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (781)
Q Consensus 520 k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~ 599 (781)
++.++|||+|...+.+.. ...+ ..... ..+++.|+++|++...||++.+++++..+.+
T Consensus 169 ~~~~i~~~~~~~~~~~~~-~~~~-------------------~~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~ 226 (374)
T cd03801 169 KITVIPNGVDTERFRPAP-RAAR-------------------RRLGI--PEDEPVILFVGRLVPRKGVDLLLEALAKLRK 226 (374)
T ss_pred cEEEecCcccccccCccc-hHHH-------------------hhcCC--cCCCeEEEEecchhhhcCHHHHHHHHHHHhh
Confidence 899999999998876543 1111 01111 4567889999999999999999999999988
Q ss_pred cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCc
Q 003985 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFG 679 (781)
Q Consensus 600 ~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fG 679 (781)
..++++|+++|++.. ...+++.++++++.++|.|+| .++.+++..+++. +|++++|+..|++|
T Consensus 227 ~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~~~ 289 (374)
T cd03801 227 EYPDVRLVIVGDGPL------------REELEALAAELGLGDRVTFLG----FVPDEDLPALYAA-ADVFVLPSLYEGFG 289 (374)
T ss_pred hcCCeEEEEEeCcHH------------HHHHHHHHHHhCCCcceEEEe----ccChhhHHHHHHh-cCEEEecchhcccc
Confidence 778999999997755 677788888889999999999 5667899999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003985 680 LTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 680 ltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~ 759 (781)
++++|||+||+|||+|+.++..|++.++.+|+++++.|+++++++|.+++ .|++.++++++++++.+.+.|||++.
T Consensus 290 ~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (374)
T cd03801 290 LVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLL----DDPELRRRLGEAARERVAERFSWDRV 365 (374)
T ss_pred chHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHHHhcCHHHH
Confidence 99999999999999999999999999999999999999999999998877 89999999999999999999999764
Q ss_pred hhccchHHHH
Q 003985 760 GIVDPSPFVI 769 (781)
Q Consensus 760 ~il~~ye~ll 769 (781)
.+.|.+++
T Consensus 366 --~~~~~~~~ 373 (374)
T cd03801 366 --AARTEEVY 373 (374)
T ss_pred --HHHHHHhh
Confidence 44555443
No 42
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=100.00 E-value=2.7e-33 Score=316.27 Aligned_cols=386 Identities=13% Similarity=0.049 Sum_probs=252.7
Q ss_pred CceEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeee
Q 003985 277 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (781)
Q Consensus 277 ~~~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v 356 (781)
.-.||+++|.-. +|.+..+. +++++|+++||+|+ |+|...+... +..
T Consensus 2 ~~~~~~~~~~~~-------------~~~~~R~~--------~~a~~L~~~G~~V~----ii~~~~~~~~--------~~~ 48 (415)
T cd03816 2 KRKRVCVLVLGD-------------IGRSPRMQ--------YHALSLAKHGWKVD----LVGYLETPPH--------DEI 48 (415)
T ss_pred CccEEEEEEecc-------------cCCCHHHH--------HHHHHHHhcCceEE----EEEecCCCCC--------HHH
Confidence 345788887421 35566667 67888899999999 8886532210 111
Q ss_pred cCCCCeEEEEeccCC-CcccccccccccCchhhHHHHHHHHHHHHHHHc-CCCceEEEEcCCCc---hHHHHHHHHHcCC
Q 003985 357 SGTEHTHILRVPFRS-EKGILRQWISRFDVWPYLETFTEDVGSEITAEL-QGFPDFIIGNYSDG---NLVASLLAYKMGI 431 (781)
Q Consensus 357 ~~~~~~~I~rvP~~~-~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l-~~~pDIIh~~~~~~---~lva~llar~~gv 431 (781)
....++.+++++... ..+. ...+..++......+...+...+ ..+||+||+|.+.. ...+.++++..++
T Consensus 49 ~~~~~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~ 122 (415)
T cd03816 49 LSNPNITIHPLPPPPQRLNK------LPFLLFAPLKVLWQFFSLLWLLYKLRPADYILIQNPPSIPTLLIAWLYCLLRRT 122 (415)
T ss_pred hcCCCEEEEECCCCcccccc------chHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCC
Confidence 122367788776653 1110 01111222111111122211111 34799999987553 4456667778899
Q ss_pred cEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeee
Q 003985 432 TQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVV 511 (781)
Q Consensus 432 p~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~ 511 (781)
|+|++.|+.+..... .. ........++.. ..+...++.||.||++|....+.+.+
T Consensus 123 ~~V~~~h~~~~~~~~-~~--~~~~~~~~~~~~--~~e~~~~~~ad~ii~vS~~~~~~l~~-------------------- 177 (415)
T cd03816 123 KLIIDWHNYGYTILA-LK--LGENHPLVRLAK--WYEKLFGRLADYNLCVTKAMKEDLQQ-------------------- 177 (415)
T ss_pred eEEEEcCCchHHHHh-cc--cCCCCHHHHHHH--HHHHHHhhcCCEeeecCHHHHHHHHh--------------------
Confidence 999999986421100 00 000000011111 23567788999999999987652211
Q ss_pred ccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccc-cccccCCCCCCCCCEEEEEeeccCCCChHHH
Q 003985 512 HGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQ-NDEHVGTLSDRSKPIVFSMARLDHVKNMTGL 590 (781)
Q Consensus 512 ~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~-~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~L 590 (781)
.|++ ..|+.|||||. .+.|.|.......... .. ...-+++.. .....+.. +++..+++++||+.+.||++.|
T Consensus 178 ~~~~--~~ki~vI~Ng~-~~~f~p~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~-~~~~~vi~~~grl~~~K~~~~l 250 (415)
T cd03816 178 FNNW--KIRATVLYDRP-PEQFRPLPLEEKHELF-LK--LAKTFLTRELRIGAVQLS-EERPALLVSSTSWTPDEDFGIL 250 (415)
T ss_pred hhcc--CCCeeecCCCC-HHHceeCcHHHHHHHH-Hh--ccccccccccccccceec-CCCceEEEEeccccCCCCHHHH
Confidence 1232 68999999994 4667665433211100 00 000000000 00011221 2344578889999999999999
Q ss_pred HHHHHHhhc------cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHc
Q 003985 591 VECYGKNSQ------LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIAD 664 (781)
Q Consensus 591 ieA~~~l~~------~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~ 664 (781)
++|+.++++ .+|+++|+|+|+|+. .+.++++++++++.+.+.+.| .++.+++..+|+.
T Consensus 251 i~A~~~l~~~~~~~~~~~~i~l~ivG~G~~------------~~~l~~~~~~~~l~~~~~~~g----~~~~~~~~~~l~~ 314 (415)
T cd03816 251 LDALVAYEKSAATGPKLPKLLCIITGKGPL------------KEKYLERIKELKLKKVTIRTP----WLSAEDYPKLLAS 314 (415)
T ss_pred HHHHHHHHHhhcccccCCCEEEEEEecCcc------------HHHHHHHHHHcCCCcEEEEcC----cCCHHHHHHHHHh
Confidence 999999864 247899999999987 778999999999975444556 5678899999995
Q ss_pred cCcEEEEcC---CCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCC---HHH
Q 003985 665 TKGAFVQPA---FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKEN---PSH 738 (781)
Q Consensus 665 aadvfV~PS---~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~d---p~~ 738 (781)
+|++|.|+ ..|+||++++||||||+|||+|+.||..|+|+++.+|++++ |++++|++|..++ +| ++.
T Consensus 315 -aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll----~~~~~~~~ 387 (415)
T cd03816 315 -ADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLL----SNFPNRGK 387 (415)
T ss_pred -CCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHH----hcCCCHHH
Confidence 99999753 35789999999999999999999999999999999999994 8999999998887 67 999
Q ss_pred HHHHHHHHHHHHHHhcCcch
Q 003985 739 WKKISDGGLKRIYERLVVSS 758 (781)
Q Consensus 739 ~~~~s~~a~~~v~~~ysw~~ 758 (781)
+++|+++|++.++ ++|+.
T Consensus 388 ~~~m~~~~~~~~~--~~~~~ 405 (415)
T cd03816 388 LNSLKKGAQEESE--LRWDE 405 (415)
T ss_pred HHHHHHHHHHhhh--cCHHH
Confidence 9999999999884 56644
No 43
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=100.00 E-value=6.4e-33 Score=302.36 Aligned_cols=358 Identities=17% Similarity=0.240 Sum_probs=253.6
Q ss_pred EEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCC
Q 003985 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||++++++. ..||.+.++. +|++.|.++||+|+ +++...... .. ....
T Consensus 1 ~il~~~~~~-----------~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~-~~-------~~~~- 48 (360)
T cd04951 1 KILYVITGL-----------GLGGAEKQVV--------DLADQFVAKGHQVA----IISLTGESE-VK-------PPID- 48 (360)
T ss_pred CeEEEecCC-----------CCCCHHHHHH--------HHHHhcccCCceEE----EEEEeCCCC-cc-------chhh-
Confidence 577776543 2589999999 77778899999999 887542111 00 0000
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEec
Q 003985 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAH 438 (781)
Q Consensus 360 ~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~-gvp~v~t~H 438 (781)
......++.... .+.++.. ...+.+.+.+ .+||+||+|...+++++.++++.. ++|++++.|
T Consensus 49 -~~~~~~~~~~~~------------~~~~~~~-~~~~~~~~~~---~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h 111 (360)
T cd04951 49 -ATIILNLNMSKN------------PLSFLLA-LWKLRKILRQ---FKPDVVHAHMFHANIFARLLRLFLPSPPLICTAH 111 (360)
T ss_pred -ccceEEeccccc------------chhhHHH-HHHHHHHHHh---cCCCEEEEcccchHHHHHHHHhhCCCCcEEEEee
Confidence 011112222111 1111111 1122333333 489999999988777666665543 678999999
Q ss_pred CCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003985 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~ 518 (781)
+..... .. ..+ ........++.++++|....+.+.+. .++. .
T Consensus 112 ~~~~~~------~~------~~~-----~~~~~~~~~~~~~~~s~~~~~~~~~~-------------------~~~~--~ 153 (360)
T cd04951 112 SKNEGG------RL------RML-----AYRLTDFLSDLTTNVSKEALDYFIAS-------------------KAFN--A 153 (360)
T ss_pred ccCchh------HH------HHH-----HHHHHhhccCceEEEcHHHHHHHHhc-------------------cCCC--c
Confidence 753211 00 001 11123345777888887654421111 1122 5
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003985 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.+||||+|...|.+......... +.+++ ++++++++++||+.+.||++.+++++.++.
T Consensus 154 ~~~~~i~ng~~~~~~~~~~~~~~~~~-----------------~~~~~--~~~~~~~l~~g~~~~~kg~~~li~a~~~l~ 214 (360)
T cd04951 154 NKSFVVYNGIDTDRFRKDPARRLKIR-----------------NALGV--KNDTFVILAVGRLVEAKDYPNLLKAFAKLL 214 (360)
T ss_pred ccEEEEccccchhhcCcchHHHHHHH-----------------HHcCc--CCCCEEEEEEeeCchhcCcHHHHHHHHHHH
Confidence 68999999999887766543322221 23555 567789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCC
Q 003985 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (781)
Q Consensus 599 ~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 678 (781)
+..++++|+|+|+|+. .+.+++.++++++.++|.|+|.+ .++..+++. +|++|+||..|+|
T Consensus 215 ~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-ad~~v~~s~~e~~ 275 (360)
T cd04951 215 SDYLDIKLLIAGDGPL------------RATLERLIKALGLSNRVKLLGLR------DDIAAYYNA-ADLFVLSSAWEGF 275 (360)
T ss_pred hhCCCeEEEEEcCCCc------------HHHHHHHHHhcCCCCcEEEeccc------ccHHHHHHh-hceEEecccccCC
Confidence 8778999999999976 56788888889998999999953 357788885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcch
Q 003985 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSS 758 (781)
Q Consensus 679 GltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~ 758 (781)
|++++|||+||+|||+++.|+..|++++ +|+.++++|+++++++|.++++ .+++.++.++++ ++.+.++|||+.
T Consensus 276 ~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~i~~ll~---~~~~~~~~~~~~-~~~~~~~~s~~~ 349 (360)
T cd04951 276 GLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDPEALANKIDEILK---MSGEERDIIGAR-RERIVKKFSINS 349 (360)
T ss_pred ChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHHHHHHHHh---CCHHHHHHHHHH-HHHHHHhcCHHH
Confidence 9999999999999999999999999976 7999999999999999988773 567777777777 888999999965
Q ss_pred hhhccchHHHHH
Q 003985 759 DGIVDPSPFVIN 770 (781)
Q Consensus 759 ~~il~~ye~ll~ 770 (781)
+++.|++++.
T Consensus 350 --~~~~~~~~y~ 359 (360)
T cd04951 350 --IVQQWLTLYT 359 (360)
T ss_pred --HHHHHHHHhh
Confidence 5677777763
No 44
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=100.00 E-value=8.5e-34 Score=313.84 Aligned_cols=347 Identities=15% Similarity=0.184 Sum_probs=235.7
Q ss_pred eEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHC--CCceeeceeEEEccCCCCCCCccCcceeee
Q 003985 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQ--GLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (781)
Q Consensus 279 ~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~--GheV~~~v~VlT~~~p~~~~~~~~~~~e~v 356 (781)
|||+++++. + |..||++.++. ++++.|.++ |++|. ++++..+... ......
T Consensus 1 mkI~~~~~~-~---------~~~GG~e~~~~--------~l~~~L~~~~~g~~v~----v~~~~~~~~~-----~~~~~~ 53 (359)
T PRK09922 1 MKIAFIGEA-V---------SGFGGMETVIS--------NVINTFEESKINCEMF----FFCRNDKMDK-----AWLKEI 53 (359)
T ss_pred CeeEEeccc-c---------cCCCchhHHHH--------HHHHHhhhcCcceeEE----EEecCCCCCh-----HHHHhc
Confidence 799999864 3 34699999999 777778999 77777 7776533110 000000
Q ss_pred cCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE--E
Q 003985 357 SGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ--C 434 (781)
Q Consensus 357 ~~~~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~--v 434 (781)
.-.......++++. ... .....+.+.+. +.+||+||+|.......+.++++..++|. +
T Consensus 54 ~~~~~~~~~~~~~~----------~~~-------~~~~~l~~~l~---~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (359)
T PRK09922 54 KYAQSFSNIKLSFL----------RRA-------KHVYNFSKWLK---ETQPDIVICIDVISCLYANKARKKSGKQFKIF 113 (359)
T ss_pred chhcccccchhhhh----------ccc-------HHHHHHHHHHH---hcCCCEEEEcCHHHHHHHHHHHHHhCCCCeEE
Confidence 00000000011100 000 11122333333 34899999998766677777777777654 4
Q ss_pred EEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccC
Q 003985 435 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGI 514 (781)
Q Consensus 435 ~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi 514 (781)
.+.|...... . .+. ...+..+|.++++|....+.+. ..|+
T Consensus 114 ~~~h~~~~~~--------~----~~~--------~~~~~~~d~~i~~S~~~~~~~~--------------------~~~~ 153 (359)
T PRK09922 114 SWPHFSLDHK--------K----HAE--------CKKITCADYHLAISSGIKEQMM--------------------ARGI 153 (359)
T ss_pred EEecCccccc--------c----hhh--------hhhhhcCCEEEEcCHHHHHHHH--------------------HcCC
Confidence 4455321100 0 000 0123689999999987655211 1233
Q ss_pred CCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeecc--CCCChHHHHH
Q 003985 515 DVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD--HVKNMTGLVE 592 (781)
Q Consensus 515 ~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~--~~Kgl~~Lie 592 (781)
+ ..++.+||||+|.+.+..... ...++++|+++||+. +.||+..+++
T Consensus 154 ~--~~ki~vi~N~id~~~~~~~~~-----------------------------~~~~~~~i~~~Grl~~~~~k~~~~l~~ 202 (359)
T PRK09922 154 S--AQRISVIYNPVEIKTIIIPPP-----------------------------ERDKPAVFLYVGRLKFEGQKNVKELFD 202 (359)
T ss_pred C--HHHEEEEcCCCCHHHccCCCc-----------------------------ccCCCcEEEEEEEEecccCcCHHHHHH
Confidence 3 568999999999654321110 023467899999996 4699999999
Q ss_pred HHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEc
Q 003985 593 CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQP 672 (781)
Q Consensus 593 A~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~P 672 (781)
++.++.. +++|+|+|+|++ .+.++++++++++.++|.|+|++.+ +.+++..+++. +|++|+|
T Consensus 203 a~~~~~~---~~~l~ivG~g~~------------~~~l~~~~~~~~l~~~v~f~G~~~~--~~~~~~~~~~~-~d~~v~~ 264 (359)
T PRK09922 203 GLSQTTG---EWQLHIIGDGSD------------FEKCKAYSRELGIEQRIIWHGWQSQ--PWEVVQQKIKN-VSALLLT 264 (359)
T ss_pred HHHhhCC---CeEEEEEeCCcc------------HHHHHHHHHHcCCCCeEEEecccCC--cHHHHHHHHhc-CcEEEEC
Confidence 9988743 799999999977 6788999999999999999997653 35678888885 9999999
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEcC-ccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHH--HHHHHHHHHHH
Q 003985 673 AFYEAFGLTVVEAMTCGLPTFATC-HGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSH--WKKISDGGLKR 749 (781)
Q Consensus 673 S~~E~fGltvlEAMa~GlPVIaT~-~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~--~~~~s~~a~~~ 749 (781)
|.+|+||++++||||||+|||+|+ .||+.|+|.++.+|++++++|+++++++|.+++ +|++. ...+++++++.
T Consensus 265 s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~----~~~~~~~~~~~~~~~~~~ 340 (359)
T PRK09922 265 SKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVI----SGEVKYQHDAIPNSIERF 340 (359)
T ss_pred CcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHH----hCcccCCHHHHHHHHHHh
Confidence 999999999999999999999999 999999999999999999999999999998887 77763 44444444444
Q ss_pred HHHhcCcchhhhccchHHH
Q 003985 750 IYERLVVSSDGIVDPSPFV 768 (781)
Q Consensus 750 v~~~ysw~~~~il~~ye~l 768 (781)
..++|+- .+++.|+.+
T Consensus 341 ~~~~~~~---~~~~~~~~~ 356 (359)
T PRK09922 341 YEVLYFK---NLNNALFSK 356 (359)
T ss_pred hHHHHHH---HHHHHHHHH
Confidence 4433321 444455544
No 45
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=100.00 E-value=1.1e-32 Score=299.50 Aligned_cols=357 Identities=15% Similarity=0.167 Sum_probs=248.9
Q ss_pred EEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCC
Q 003985 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+||++.. |..||.+.++. +|+++|.+.||+|+ +++............ ..
T Consensus 1 kI~~v~~~~----------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~~-------~~ 51 (366)
T cd03822 1 RIALVSPYP----------PRKCGIATFTT--------DLVNALSARGPDVL----VVSVAALYPSLLYGG-------EQ 51 (366)
T ss_pred CeEEecCCC----------CCCCcHHHHHH--------HHHHHhhhcCCeEE----EEEeecccCcccCCC-------cc
Confidence 699998642 45799999999 77778899999999 776553321111000 00
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc---hH---HHHHHHHHcCCcE
Q 003985 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG---NL---VASLLAYKMGITQ 433 (781)
Q Consensus 360 ~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~---~l---va~llar~~gvp~ 433 (781)
....... ......+ ..+.+.+. ..+||+||++.+.+ .. ......+..++|+
T Consensus 52 ~~~~~~~---------------~~~~~~~-----~~~~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (366)
T cd03822 52 EVVRVIV---------------LDNPLDY-----RRAARAIR---LSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPV 108 (366)
T ss_pred cceeeee---------------cCCchhH-----HHHHHHHh---hcCCCEEEEeeccccccchhhHHHHHHHhhcCCCE
Confidence 0000000 0011111 11222333 34899999887432 12 2222234589999
Q ss_pred EEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeecc
Q 003985 434 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHG 513 (781)
Q Consensus 434 v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~g 513 (781)
+++.|+..... . .+ . ........++.+|.|+++|..... +..
T Consensus 109 i~~~h~~~~~~-~----~~-----~-----~~~~~~~~~~~~d~ii~~s~~~~~---~~~-------------------- 150 (366)
T cd03822 109 VVTLHTVLLHE-P----RP-----G-----DRALLRLLLRRADAVIVMSSELLR---ALL-------------------- 150 (366)
T ss_pred EEEEecCCccc-c----ch-----h-----hhHHHHHHHhcCCEEEEeeHHHHH---HHH--------------------
Confidence 99999861110 0 00 0 011234568899999999733322 110
Q ss_pred CCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHH
Q 003985 514 IDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVEC 593 (781)
Q Consensus 514 i~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA 593 (781)
...+..++.+||||+|...+.+...... .+. ..++++|+++||+.+.||++.+++|
T Consensus 151 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~----------------------~~~--~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 151 LRAYPEKIAVIPHGVPDPPAEPPESLKA----------------------LGG--LDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred hhcCCCcEEEeCCCCcCcccCCchhhHh----------------------hcC--CCCCeEEEEEeeccCCCCHHHHHHH
Confidence 0111469999999999876654332110 111 4567899999999999999999999
Q ss_pred HHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcC
Q 003985 594 YGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 673 (781)
Q Consensus 594 ~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS 673 (781)
+.++.+..++++|+|+|++.... ........++++++++.++|.|+|. .++.+++..+++. +|++++||
T Consensus 207 ~~~~~~~~~~~~l~i~G~~~~~~-------~~~~~~~~~~i~~~~~~~~v~~~~~---~~~~~~~~~~~~~-ad~~v~ps 275 (366)
T cd03822 207 LPLLVAKHPDVRLLVAGETHPDL-------ERYRGEAYALAERLGLADRVIFINR---YLPDEELPELFSA-ADVVVLPY 275 (366)
T ss_pred HHHHHhhCCCeEEEEeccCccch-------hhhhhhhHhHHHhcCCCCcEEEecC---cCCHHHHHHHHhh-cCEEEecc
Confidence 99998888899999999986510 0001111145788899999999982 3778899999996 99999999
Q ss_pred CCC--CCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 003985 674 FYE--AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 751 (781)
Q Consensus 674 ~~E--~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~ 751 (781)
.+| +||++++|||+||+|||+|+.|| .+.+.++.+|++++++|+++++++|.+++ +|++.+.+|++++++.+.
T Consensus 276 ~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~----~~~~~~~~~~~~~~~~~~ 350 (366)
T cd03822 276 RSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLL----ADPELAQALRARAREYAR 350 (366)
T ss_pred cccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHh
Confidence 999 99999999999999999999999 77778888999999999999999998887 899999999999999996
Q ss_pred HhcCcchhhhccchHHHH
Q 003985 752 ERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 752 ~~ysw~~~~il~~ye~ll 769 (781)
+ |||+. +++.|.+++
T Consensus 351 ~-~s~~~--~~~~~~~~~ 365 (366)
T cd03822 351 A-MSWER--VAERYLRLL 365 (366)
T ss_pred h-CCHHH--HHHHHHHHh
Confidence 6 99965 456666654
No 46
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=3.9e-34 Score=328.50 Aligned_cols=291 Identities=18% Similarity=0.255 Sum_probs=229.5
Q ss_pred CCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCcccc----CCCChhhHhhhhcc-ccchhhhhHHHHHHhhCCEEE
Q 003985 406 GFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTK----YPDSDIYWKKFDEK-YHFSCQFTADLIAMNNADFII 479 (781)
Q Consensus 406 ~~pDIIh~~~~~-~~lva~llar~~gvp~v~t~H~l~~~k----~~~s~~~~k~~~~~-y~f~~~~~~e~~a~~~AD~II 479 (781)
.++|+||+|... .++.+.++++..|+|+++|.|+..... ..........+... .++. ...+..+++.||.|+
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~ad~Ii 249 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFF--ESLGRLAYQAADRIT 249 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHH--HHHHHHHHHhCCEEE
Confidence 478999999754 468888899999999999999864311 00000000000000 1111 123567889999999
Q ss_pred ecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccc
Q 003985 480 TSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQ 559 (781)
Q Consensus 480 t~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~ 559 (781)
++|........ ..|++ ..|+.|||||+|.+.|.+....
T Consensus 250 ~~s~~~~~~~~--------------------~~g~~--~~ki~vIpNgid~~~f~~~~~~-------------------- 287 (475)
T cd03813 250 TLYEGNRERQI--------------------EDGAD--PEKIRVIPNGIDPERFAPARRA-------------------- 287 (475)
T ss_pred ecCHHHHHHHH--------------------HcCCC--HHHeEEeCCCcCHHHcCCcccc--------------------
Confidence 99987644111 11333 6799999999999887664321
Q ss_pred cccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC
Q 003985 560 NDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL 639 (781)
Q Consensus 560 ~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L 639 (781)
+. ++++++|+++||+.+.||++.+++|++.+.+..++++|+|+|+++. ..++.++++++++++++
T Consensus 288 -----~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~--------~~~~~~e~~~li~~l~l 352 (475)
T cd03813 288 -----RP--EKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDE--------DPEYAEECRELVESLGL 352 (475)
T ss_pred -----cc--CCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCc--------ChHHHHHHHHHHHHhCC
Confidence 01 3567899999999999999999999999988889999999999853 12457788999999999
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc------CCeEEEE
Q 003985 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH------GASGFHI 713 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~d------g~~G~lv 713 (781)
.++|+|+| ..++..+++ .+|++|+||..|+||++++|||+||+|||+|+.||..|++.+ |.+|+++
T Consensus 353 ~~~V~f~G-------~~~v~~~l~-~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv 424 (475)
T cd03813 353 EDNVKFTG-------FQNVKEYLP-KLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVV 424 (475)
T ss_pred CCeEEEcC-------CccHHHHHH-hCCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEE
Confidence 99999999 135677888 499999999999999999999999999999999999999998 6799999
Q ss_pred CCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003985 714 DPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 714 ~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll 769 (781)
++.|+++++++|.+++ .|++.+++++++|++++.+.|+|++ +++.|.+++
T Consensus 425 ~~~d~~~la~ai~~ll----~~~~~~~~~~~~a~~~v~~~~s~~~--~~~~y~~lY 474 (475)
T cd03813 425 PPADPEALARAILRLL----KDPELRRAMGEAGRKRVERYYTLER--MIDSYRRLY 474 (475)
T ss_pred CCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHhCCHHH--HHHHHHHHh
Confidence 9999999999998887 8999999999999999999999965 557777765
No 47
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=100.00 E-value=4.6e-33 Score=299.89 Aligned_cols=362 Identities=17% Similarity=0.182 Sum_probs=263.1
Q ss_pred EEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCC
Q 003985 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++++-.. .||.+.++. .|++.|.+.|++|. +++....... ..... .
T Consensus 1 ~i~~i~~~~~-----------~gG~~~~~~--------~l~~~l~~~~~~v~----~~~~~~~~~~----~~~~~----~ 49 (365)
T cd03807 1 KVLHVITGLD-----------VGGAERMLV--------RLLKGLDRDRFEHV----VISLTDRGEL----GEELE----E 49 (365)
T ss_pred CeEEEEeecc-----------CccHHHHHH--------HHHHHhhhccceEE----EEecCcchhh----hHHHH----h
Confidence 5777875432 389999999 77778889999998 8775432211 11111 1
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEec
Q 003985 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAH 438 (781)
Q Consensus 360 ~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~-~gvp~v~t~H 438 (781)
.++.+..++.... ...+ .+...+.+.+.. .+||+||++.......+...++. .+++++.+.|
T Consensus 50 ~~i~v~~~~~~~~----------~~~~----~~~~~~~~~~~~---~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (365)
T cd03807 50 AGVPVYCLGKRPG----------RPDP----GALLRLYKLIRR---LRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIR 112 (365)
T ss_pred cCCeEEEEecccc----------cccH----HHHHHHHHHHHh---hCCCEEEeccccccHHHHHHHHhcCCCcEEEEec
Confidence 2456666654431 0111 111223333333 38999999987777776666666 6899999999
Q ss_pred CCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003985 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~ 518 (781)
....... .+. ...+. .......+.+|.++++|......... .|++ .
T Consensus 113 ~~~~~~~-----~~~--~~~~~-----~~~~~~~~~~~~~i~~s~~~~~~~~~--------------------~~~~--~ 158 (365)
T cd03807 113 HSDLDLG-----KKS--TRLVA-----RLRRLLSSFIPLIVANSAAAAEYHQA--------------------IGYP--P 158 (365)
T ss_pred CCccccc-----chh--HhHHH-----HHHHHhccccCeEEeccHHHHHHHHH--------------------cCCC--h
Confidence 8654321 010 01111 12334667889999999876552111 1232 5
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003985 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.++|||+|...+.+........ ++++++ ++++++|+++||+.+.||++.+++++.++.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~~~-----------------~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~ 219 (365)
T cd03807 159 KKIVVIPNGVDTERFSPDLDARARL-----------------REELGL--PEDTFLIGIVARLHPQKDHATLLRAAALLL 219 (365)
T ss_pred hheeEeCCCcCHHhcCCcccchHHH-----------------HHhcCC--CCCCeEEEEecccchhcCHHHHHHHHHHHH
Confidence 6899999999988776654332221 123555 567788999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH-HcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCC
Q 003985 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK-TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (781)
Q Consensus 599 ~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~-el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 677 (781)
+..++++|+|+|.++. ......... ++++.++|.|+|.+ +++..+++. +|++++||..|+
T Consensus 220 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~ps~~e~ 280 (365)
T cd03807 220 KKFPNARLLLVGDGPD------------RANLELLALKELGLEDKVILLGER------SDVPALLNA-LDVFVLSSLSEG 280 (365)
T ss_pred HhCCCeEEEEecCCcc------------hhHHHHHHHHhcCCCceEEEcccc------ccHHHHHHh-CCEEEeCCcccc
Confidence 8788999999999876 334444554 78899999999942 367888885 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcc
Q 003985 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVS 757 (781)
Q Consensus 678 fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~ 757 (781)
||++++|||+||+|||+|+.||..|++.+ +|++++++|+++++++|.+++ +|++.+.++++++++.+.++|||+
T Consensus 281 ~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 354 (365)
T cd03807 281 FPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALL----ADPALRQALGEAARERIEENFSIE 354 (365)
T ss_pred CCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999999999999999999999977 899999999999999998887 789999999999999999999996
Q ss_pred hhhhccchHHHH
Q 003985 758 SDGIVDPSPFVI 769 (781)
Q Consensus 758 ~~~il~~ye~ll 769 (781)
. +++.|.+++
T Consensus 355 ~--~~~~~~~~y 364 (365)
T cd03807 355 A--MVEAYEELY 364 (365)
T ss_pred H--HHHHHHHHh
Confidence 5 556666654
No 48
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=9.1e-33 Score=311.67 Aligned_cols=369 Identities=12% Similarity=0.070 Sum_probs=239.4
Q ss_pred ceEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCC-CceeeceeEEEccCCCCCCC-------cc
Q 003985 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQG-LDISPKILIVTRLIPDAKGT-------TC 349 (781)
Q Consensus 278 ~~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~G-heV~~~v~VlT~~~p~~~~~-------~~ 349 (781)
.|||+|+|.-+. |..+|+.+.++ .++.+|.++| |+|+ |+++..+..... .+
T Consensus 4 ~mrIaivTdt~l---------P~vnGva~s~~--------~~a~~L~~~G~heV~----vvaP~~~~~~~~~~~~~~~~f 62 (462)
T PLN02846 4 KQHIAIFTTASL---------PWMTGTAVNPL--------FRAAYLAKDGDREVT----LVIPWLSLKDQKLVYPNKITF 62 (462)
T ss_pred CCEEEEEEcCCC---------CCCCCeeccHH--------HHHHHHHhcCCcEEE----EEecCCccccccccccccccc
Confidence 589999997554 78999999999 7777899999 7999 988765432110 00
Q ss_pred Ccc---eeeecCCCCeEEEEeccCCCcccccccccc--cCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHH--
Q 003985 350 NQR---LERVSGTEHTHILRVPFRSEKGILRQWISR--FDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLV-- 421 (781)
Q Consensus 350 ~~~---~e~v~~~~~~~I~rvP~~~~~~~~~~~isr--~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~-~lv-- 421 (781)
... ...+....+.+|.++|..+...|-. +++. ..++ ...++.+.+.+ .+|||||.+.+.. ++.
T Consensus 63 ~~~~~~e~~~~~~~~~~v~r~~s~~~p~yp~-r~~~~~r~~~-----~~~~i~~~l~~---~~pDVIHv~tP~~LG~~~~ 133 (462)
T PLN02846 63 SSPSEQEAYVRQWLEERISFLPKFSIKFYPG-KFSTDKRSIL-----PVGDISETIPD---EEADIAVLEEPEHLTWYHH 133 (462)
T ss_pred cCchhhhhhhhhhccCeEEEecccccccCcc-cccccccccC-----ChHHHHHHHHh---cCCCEEEEcCchhhhhHHH
Confidence 000 0011111123555655443211110 0100 0011 12244455544 3899999999876 555
Q ss_pred HHHHHHHcCCcEEEEecCCccccCCCC-hh-hHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccc
Q 003985 422 ASLLAYKMGITQCTIAHALEKTKYPDS-DI-YWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESH 499 (781)
Q Consensus 422 a~llar~~gvp~v~t~H~l~~~k~~~s-~~-~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~ 499 (781)
|...++++++ +|.++|+-.. .|... .. ..+. ...+++.++ ..-..+|.+++.|....+ +
T Consensus 134 g~~~~~k~~~-vV~tyHT~y~-~Y~~~~~~g~~~~--~l~~~~~~~----~~r~~~d~vi~pS~~~~~--------l--- 194 (462)
T PLN02846 134 GKRWKTKFRL-VIGIVHTNYL-EYVKREKNGRVKA--FLLKYINSW----VVDIYCHKVIRLSAATQD--------Y--- 194 (462)
T ss_pred HHHHHhcCCc-EEEEECCChH-HHHHHhccchHHH--HHHHHHHHH----HHHHhcCEEEccCHHHHH--------H---
Confidence 6667777766 8889998321 11100 00 0000 001111111 111348999999974422 0
Q ss_pred cccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEe
Q 003985 500 TAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMA 579 (781)
Q Consensus 500 ~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vG 579 (781)
.....+.++|||.+.|.|....... ... ..+.-.++++|+|
T Consensus 195 ------------------~~~~i~~v~GVd~~~f~~~~~~~~~--------------------~~~-~~~~~~~~~l~vG 235 (462)
T PLN02846 195 ------------------PRSIICNVHGVNPKFLEIGKLKLEQ--------------------QKN-GEQAFTKGAYYIG 235 (462)
T ss_pred ------------------hhCEEecCceechhhcCCCcccHhh--------------------hcC-CCCCcceEEEEEe
Confidence 1123334589999988775432111 011 0011235789999
Q ss_pred eccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHH
Q 003985 580 RLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELY 659 (781)
Q Consensus 580 RL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~ 659 (781)
||.+.||++.|++|++++.+..++++|+|+|+|++ .++++++++++++..++ |.|. ...+
T Consensus 236 RL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~------------~~~L~~~a~~l~l~~~v-f~G~----~~~~--- 295 (462)
T PLN02846 236 KMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGED------------SDEVKAAAEKLELDVRV-YPGR----DHAD--- 295 (462)
T ss_pred cCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCcc------------HHHHHHHHHhcCCcEEE-ECCC----CCHH---
Confidence 99999999999999999987778999999999988 77899999999987555 7773 2333
Q ss_pred HHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHH
Q 003985 660 RYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHW 739 (781)
Q Consensus 660 ~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~ 739 (781)
.+++ ++|+||+||.+|+||++++||||||+|||+++.++ .+++.++.+|+.++ |.++++++|..++. .++
T Consensus 296 ~~~~-~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~~~l~---~~~--- 365 (462)
T PLN02846 296 PLFH-DYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATLKALA---EEP--- 365 (462)
T ss_pred HHHH-hCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHHHHHHc---cCc---
Confidence 3555 58999999999999999999999999999999998 59999999999995 89999999998873 233
Q ss_pred HHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003985 740 KKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 740 ~~~s~~a~~~v~~~ysw~~~~il~~ye~ll~ 770 (781)
..++.+++ +.|||++ +.+.|.+++.
T Consensus 366 ~~~~~~a~----~~~SWe~--~~~~l~~~~~ 390 (462)
T PLN02846 366 APLTDAQR----HELSWEA--ATERFLRVAD 390 (462)
T ss_pred hhHHHHHH----HhCCHHH--HHHHHHHHhc
Confidence 23333332 5899954 6677777764
No 49
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=100.00 E-value=4.1e-32 Score=290.02 Aligned_cols=345 Identities=17% Similarity=0.249 Sum_probs=249.3
Q ss_pred EEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCC
Q 003985 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||++++++.. | .||...++. +|+++|.++||+|+ +++....+.. .. ...
T Consensus 1 kI~i~~~~~~---------~-~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~-------~~--~~~ 49 (348)
T cd03820 1 KILFVIPSLG---------N-AGGAERVLS--------NLANALAEKGHEVT----IISLDKGEPP-------FY--ELD 49 (348)
T ss_pred CeEEEecccc---------C-CCChHHHHH--------HHHHHHHhCCCeEE----EEecCCCCCC-------cc--ccC
Confidence 6888886544 2 689999988 77778889999999 8876643300 00 011
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcC-CcEEEEec
Q 003985 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMG-ITQCTIAH 438 (781)
Q Consensus 360 ~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~g-vp~v~t~H 438 (781)
.++.+..++...... .+.++ .+...+.+.+. ..+||+||+++.. ....+.....+ +|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~----------~~~~~-~~~~~~~~~l~---~~~~d~i~~~~~~--~~~~~~~~~~~~~~~i~~~~ 113 (348)
T cd03820 50 PKIKVIDLGDKRDSK----------LLARF-KKLRRLRKLLK---NNKPDVVISFLTS--LLTFLASLGLKIVKLIVSEH 113 (348)
T ss_pred Cccceeecccccccc----------hhccc-cchHHHHHhhc---ccCCCEEEEcCch--HHHHHHHHhhccccEEEecC
Confidence 234555554432110 00000 11112222232 2489999999877 22223333444 49999999
Q ss_pred CCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003985 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~ 518 (781)
+....... ...+. ......++.+|.+++.|...... + .....
T Consensus 114 ~~~~~~~~--~~~~~------------~~~~~~~~~~d~ii~~s~~~~~~-------~-----------------~~~~~ 155 (348)
T cd03820 114 NSPDAYKK--RLRRL------------LLRRLLYRRADAVVVLTEEDRAL-------Y-----------------YKKFN 155 (348)
T ss_pred CCccchhh--hhHHH------------HHHHHHHhcCCEEEEeCHHHHHH-------h-----------------hccCC
Confidence 75432110 00000 02456788999999999876310 0 01125
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003985 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.++|||+|...+.+. ...+++.++++|++.+.||++.+++++.++.
T Consensus 156 ~~~~vi~~~~~~~~~~~~-------------------------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~ 204 (348)
T cd03820 156 KNVVVIPNPLPFPPEEPS-------------------------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIA 204 (348)
T ss_pred CCeEEecCCcChhhcccc-------------------------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHH
Confidence 789999999997654332 0346788999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCC
Q 003985 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (781)
Q Consensus 599 ~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 678 (781)
+..++++|+|+|++.. ...+.++++++++.++|.|.|. .+++..+++. +|+++.||.+|+|
T Consensus 205 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-ad~~i~ps~~e~~ 265 (348)
T cd03820 205 KKHPDWKLRIVGDGPE------------REALEALIKELGLEDRVILLGF------TKNIEEYYAK-ASIFVLTSRFEGF 265 (348)
T ss_pred hcCCCeEEEEEeCCCC------------HHHHHHHHHHcCCCCeEEEcCC------cchHHHHHHh-CCEEEeCcccccc
Confidence 8889999999999876 5667778899999999999994 4678899995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCcc-ccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcc
Q 003985 679 GLTVVEAMTCGLPTFATCHG-GPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVS 757 (781)
Q Consensus 679 GltvlEAMa~GlPVIaT~~G-G~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~ 757 (781)
|++++|||+||+|||+|+.+ +..+++.++.+|+++++.|+++++++|.+++ .||+.++++++++++.+ ++|+|+
T Consensus 266 ~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~ 340 (348)
T cd03820 266 PMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLM----EDEELRKRMGANARESA-ERFSIE 340 (348)
T ss_pred CHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-HHhCHH
Confidence 99999999999999999865 5777888878999999999999999998887 89999999999996655 889996
Q ss_pred hhhhccchH
Q 003985 758 SDGIVDPSP 766 (781)
Q Consensus 758 ~~~il~~ye 766 (781)
+ +++.|.
T Consensus 341 ~--~~~~~~ 347 (348)
T cd03820 341 N--IIKQWE 347 (348)
T ss_pred H--HHHHhc
Confidence 5 445443
No 50
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=100.00 E-value=1.6e-32 Score=299.83 Aligned_cols=342 Identities=16% Similarity=0.190 Sum_probs=243.3
Q ss_pred eEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecC
Q 003985 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (781)
Q Consensus 279 ~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~ 358 (781)
|||++++... ..||.++++. .+++.|.++||+|+ +++....
T Consensus 1 MkIl~~~~~~-----------~~gG~~~~~~--------~l~~~l~~~G~~v~----v~~~~~~---------------- 41 (365)
T cd03825 1 MKVLHLNTSD-----------ISGGAARAAY--------RLHRALQAAGVDST----MLVQEKK---------------- 41 (365)
T ss_pred CeEEEEecCC-----------CCCcHHHHHH--------HHHHHHHhcCCcee----EEEeecc----------------
Confidence 7999998532 2589999999 67777899999999 8864411
Q ss_pred CCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc--CCcEEEE
Q 003985 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM--GITQCTI 436 (781)
Q Consensus 359 ~~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~--gvp~v~t 436 (781)
. +.+.+. ..+|||||.|+.....+......+. ++|.|++
T Consensus 42 ------------~------------------------~~~~~~---~~~~diih~~~~~~~~~~~~~~~~~~~~~~~v~~ 82 (365)
T cd03825 42 ------------A------------------------LISKIE---IINADIVHLHWIHGGFLSIEDLSKLLDRKPVVWT 82 (365)
T ss_pred ------------h------------------------hhhChh---cccCCEEEEEccccCccCHHHHHHHHcCCCEEEE
Confidence 0 001111 2389999999876654444444444 9999999
Q ss_pred ecCCccccCC----CChhhH-hh-----hhcccc---chhhhh-H-HHHHHhhCCEEEecCHHHHhhccccccccccccc
Q 003985 437 AHALEKTKYP----DSDIYW-KK-----FDEKYH---FSCQFT-A-DLIAMNNADFIITSTYQEIAGTKNTVGQYESHTA 501 (781)
Q Consensus 437 ~H~l~~~k~~----~s~~~~-k~-----~~~~y~---f~~~~~-~-e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~ 501 (781)
+|+....... .....+ .. ....+. +..+.. . .......++.++++|....+...+.
T Consensus 83 ~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~--------- 153 (365)
T cd03825 83 LHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRWLADCARSS--------- 153 (365)
T ss_pred cccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEehhHHHHHHHHhc---------
Confidence 9986533210 000000 00 000000 011110 1 1112245777888887554421111
Q ss_pred cccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeec
Q 003985 502 FTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARL 581 (781)
Q Consensus 502 f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL 581 (781)
......++.++|||+|.+.|.|......+ ..+++ +++++++++.|+.
T Consensus 154 ------------~~~~~~~~~vi~ngi~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~~~~ 200 (365)
T cd03825 154 ------------SLFKGIPIEVIPNGIDTTIFRPRDKREAR-------------------KRLGL--PADKKIILFGAVG 200 (365)
T ss_pred ------------cccCCCceEEeCCCCcccccCCCcHHHHH-------------------HHhCC--CCCCeEEEEEecC
Confidence 11225799999999999988765443221 22444 4566777777777
Q ss_pred cC--CCChHHHHHHHHHhhcc-CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCC-hHH
Q 003985 582 DH--VKNMTGLVECYGKNSQL-RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRAR-NGE 657 (781)
Q Consensus 582 ~~--~Kgl~~LieA~~~l~~~-~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~-~~e 657 (781)
.. .||++.++++++.+.+. .+++.++++|++... .. .++..+|.|+|+ ++ .++
T Consensus 201 ~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~------------~~-------~~~~~~v~~~g~----~~~~~~ 257 (365)
T cd03825 201 GTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPE------------IP-------PDLPFPVHYLGS----LNDDES 257 (365)
T ss_pred CCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchh------------hh-------ccCCCceEecCC----cCCHHH
Confidence 65 89999999999998765 578999999998651 00 145678999994 44 678
Q ss_pred HHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHH
Q 003985 658 LYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPS 737 (781)
Q Consensus 658 l~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~ 737 (781)
+..+++. +|++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|+++++++|.+++ .|++
T Consensus 258 ~~~~~~~-ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~----~~~~ 332 (365)
T cd03825 258 LALIYSA-ADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLL----ADPD 332 (365)
T ss_pred HHHHHHh-CCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHH----hCHH
Confidence 8889995 9999999999999999999999999999999999999999999999999999999999998887 7999
Q ss_pred HHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003985 738 HWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 738 ~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll~ 770 (781)
.++++++++++.+.++|||+. +++.|.++++
T Consensus 333 ~~~~~~~~~~~~~~~~~s~~~--~~~~~~~~y~ 363 (365)
T cd03825 333 EREELGEAARELAENEFDSRV--QAKRYLSLYE 363 (365)
T ss_pred HHHHHHHHHHHHHHHhcCHHH--HHHHHHHHHh
Confidence 999999999999999999966 4566777664
No 51
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=1.6e-32 Score=310.27 Aligned_cols=372 Identities=19% Similarity=0.207 Sum_probs=246.2
Q ss_pred EEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHC--CCceeeceeEEEccCCCCCCC------ccCcc
Q 003985 281 VVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQ--GLDISPKILIVTRLIPDAKGT------TCNQR 352 (781)
Q Consensus 281 I~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~--GheV~~~v~VlT~~~p~~~~~------~~~~~ 352 (781)
|+++.|+.- ..||.++.+++-|++| .++ ||+|+ |+|......... .|- .
T Consensus 3 ~~f~hp~~~----------~ggg~ervl~~a~~~l--------~~~~~~~~v~----i~t~~~~~~~~~~l~~~~~~f-~ 59 (419)
T cd03806 3 VGFFHPYCN----------AGGGGERVLWCAVRAL--------QKRYPNNIVV----IYTGDLDATPEEILEKVESRF-N 59 (419)
T ss_pred EEEECCCCC----------CCCCchHHHHHHHHHH--------HHhCCCcEEE----EECCCCCCCHHHHHHHHHHhc-C
Confidence 667755432 3469999999777765 444 88898 999884432100 010 1
Q ss_pred eeeecCCCCeEEEEec-cCCCcccccccccccCchhh---HHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHH
Q 003985 353 LERVSGTEHTHILRVP-FRSEKGILRQWISRFDVWPY---LETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAY 427 (781)
Q Consensus 353 ~e~v~~~~~~~I~rvP-~~~~~~~~~~~isr~~i~~y---l~~f~~~~~~~i~~~l~~~pDIIh~~~~~~-~lva~llar 427 (781)
.+. . .++.++++. .+. |+++ ..|+. +-.+...+...+......+||||+.+...+ .+. ++..
T Consensus 60 ~~~-~--~~~~~~~~~~~~~-------~~~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~--~~~~ 126 (419)
T cd03806 60 IEL-D--RPRIVFFLLKYRK-------LVEA-STYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYP--LVRL 126 (419)
T ss_pred eec-C--CCceEEEEeccee-------eecc-ccCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHH--HHHH
Confidence 111 1 234544443 111 2222 12222 122223333333333234799999886443 222 1222
Q ss_pred HcCCcEEEEecCCccccCCCCh--h-------------hHh----hhhccccchhhhhHHHHHHhhCCEEEecCHHHHhh
Q 003985 428 KMGITQCTIAHALEKTKYPDSD--I-------------YWK----KFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAG 488 (781)
Q Consensus 428 ~~gvp~v~t~H~l~~~k~~~s~--~-------------~~k----~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~ 488 (781)
..++|++..+| ++..-.+.- . ..+ .....|+.. ....+...++.||.|+++|....+.
T Consensus 127 ~~~~~~i~y~h--~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~-~~~~~~~~~~~aD~ii~~S~~~~~~ 203 (419)
T cd03806 127 LGGCPVGAYVH--YPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRL-FAFLYGLAGSFADVVMVNSTWTRNH 203 (419)
T ss_pred hcCCeEEEEec--CCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHH-HHHHHHHHhhcCCEEEECCHHHHHH
Confidence 24889999999 221000000 0 000 000011100 1124667889999999999877653
Q ss_pred ccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCC
Q 003985 489 TKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLS 568 (781)
Q Consensus 489 ~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~ 568 (781)
+++.. +. ..++.||+||+|.+.|.+.... .
T Consensus 204 ~~~~~-------------------~~---~~~~~vi~~gvd~~~~~~~~~~--------------------------~-- 233 (419)
T cd03806 204 IRSLW-------------------KR---NTKPSIVYPPCDVEELLKLPLD--------------------------E-- 233 (419)
T ss_pred HHHHh-------------------Cc---CCCcEEEcCCCCHHHhcccccc--------------------------c--
Confidence 22210 11 2488999999998766543210 0
Q ss_pred CCCCCEEEEEeeccCCCChHHHHHHHHHhhccCC-----CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 003985 569 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE-----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 643 (781)
Q Consensus 569 ~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~-----~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V 643 (781)
..++++|+|+||+.+.||++.+++|++++.+..+ +++|+|+|++... +..++.+.++++++++++.++|
T Consensus 234 ~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~------~~~~~~~~L~~~~~~l~l~~~V 307 (419)
T cd03806 234 KTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNE------DDEKRVEDLKLLAKELGLEDKV 307 (419)
T ss_pred ccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCc------ccHHHHHHHHHHHHHhCCCCeE
Confidence 2456799999999999999999999999987654 4999999998651 2234678899999999999999
Q ss_pred EEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccc-ccccc---cCCeEEEECCCCHH
Q 003985 644 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP-AEIIE---HGASGFHIDPYHPD 719 (781)
Q Consensus 644 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~-~EiI~---dg~~G~lv~p~d~e 719 (781)
.|+| .++.+++..+|+. +|++|+||..|+||++++|||+||+|||+++.||+ .|++. ++.+|++++ |++
T Consensus 308 ~f~g----~v~~~~l~~~l~~-adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~ 380 (419)
T cd03806 308 EFVV----NAPFEELLEELST-ASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAE 380 (419)
T ss_pred EEec----CCCHHHHHHHHHh-CeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHH
Confidence 9999 6788999999995 99999999999999999999999999999999886 47887 899999985 999
Q ss_pred HHHHHHHHHHHhccCCH-HHHHHHHHHHHHHHHHhcCcchh
Q 003985 720 QAAELMADFFGKCKENP-SHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 720 ~lA~~I~~~l~~l~~dp-~~~~~~s~~a~~~v~~~ysw~~~ 759 (781)
++|++|.+++ +++ +.++.+ .++++++.++|||+++
T Consensus 381 ~la~ai~~ll----~~~~~~~~~~-~~~~~~~~~~fs~~~f 416 (419)
T cd03806 381 EYAEAIEKIL----SLSEEERLRI-RRAARSSVKRFSDEEF 416 (419)
T ss_pred HHHHHHHHHH----hCCHHHHHHH-HHHHHHHHHhhCHHHh
Confidence 9999999887 544 455555 5555667799999875
No 52
>PLN02949 transferase, transferring glycosyl groups
Probab=100.00 E-value=3.1e-32 Score=310.46 Aligned_cols=236 Identities=18% Similarity=0.223 Sum_probs=186.7
Q ss_pred HHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhh
Q 003985 468 DLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH 547 (781)
Q Consensus 468 e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~ 547 (781)
+....+.||.|+++|....+.+++.. +. ..++.+++||+|.+.+...+..
T Consensus 214 ~~~~~~~ad~ii~nS~~t~~~l~~~~-------------------~~---~~~i~vvyp~vd~~~~~~~~~~-------- 263 (463)
T PLN02949 214 YGLVGRCAHLAMVNSSWTKSHIEALW-------------------RI---PERIKRVYPPCDTSGLQALPLE-------- 263 (463)
T ss_pred HHHHcCCCCEEEECCHHHHHHHHHHc-------------------CC---CCCeEEEcCCCCHHHcccCCcc--------
Confidence 44567899999999987765332210 11 3478899999997654221100
Q ss_pred cchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhc----cCCCeEEEEEeCcCCCCCCcchHH
Q 003985 548 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ----LRELVNLVVVAGYIDVNKSKDREE 623 (781)
Q Consensus 548 ~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~----~~~~~~LvIVG~g~~~~~~~d~ee 623 (781)
.++++++++++||+.+.||++.+++|++++.+ ..++++|+|+|+++. .++
T Consensus 264 --------------------~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~------~~~ 317 (463)
T PLN02949 264 --------------------RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRN------KED 317 (463)
T ss_pred --------------------ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCC------ccc
Confidence 02346789999999999999999999998754 246899999999854 122
Q ss_pred HHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccc-c
Q 003985 624 IAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPA-E 702 (781)
Q Consensus 624 ~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~-E 702 (781)
.++.++++++++++++.++|.|+| .++.+++..+|+. ++++|+||..|+||++++|||+||+|||+++.||+. |
T Consensus 318 ~~~~~eL~~la~~l~L~~~V~f~g----~v~~~el~~ll~~-a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~e 392 (463)
T PLN02949 318 EERLQKLKDRAKELGLDGDVEFHK----NVSYRDLVRLLGG-AVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMD 392 (463)
T ss_pred HHHHHHHHHHHHHcCCCCcEEEeC----CCCHHHHHHHHHh-CcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcce
Confidence 345678999999999999999999 6778899999995 999999999999999999999999999999999985 7
Q ss_pred cccc---CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh--hhccchHHHHH
Q 003985 703 IIEH---GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD--GIVDPSPFVIN 770 (781)
Q Consensus 703 iI~d---g~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~--~il~~ye~ll~ 770 (781)
+|.+ |.+|++++ |++++|++|.++++ .+++.+++|+++|++++ ++|||+++ .+.+.+.++++
T Consensus 393 IV~~~~~g~tG~l~~--~~~~la~ai~~ll~---~~~~~r~~m~~~ar~~~-~~FS~e~~~~~~~~~i~~l~~ 459 (463)
T PLN02949 393 IVLDEDGQQTGFLAT--TVEEYADAILEVLR---MRETERLEIAAAARKRA-NRFSEQRFNEDFKDAIRPILN 459 (463)
T ss_pred eeecCCCCcccccCC--CHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHH-HHcCHHHHHHHHHHHHHHHHh
Confidence 7765 67899985 99999999988872 36888999999999999 67999876 44444444443
No 53
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=100.00 E-value=8.6e-32 Score=287.60 Aligned_cols=351 Identities=18% Similarity=0.214 Sum_probs=250.7
Q ss_pred EEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCC
Q 003985 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++++... .||...++. +|+++|.++||+|. +++............ ...
T Consensus 1 kIl~~~~~~~-----------~gG~~~~~~--------~l~~~l~~~g~~v~----v~~~~~~~~~~~~~~------~~~ 51 (353)
T cd03811 1 KILFVIPSLG-----------GGGAERVLL--------NLANGLDKRGYDVT----LVVLRDEGDYLELLP------SNV 51 (353)
T ss_pred CeEEEeeccc-----------CCCcchhHH--------HHHHHHHhcCceEE----EEEcCCCCccccccc------cch
Confidence 6888886432 589999999 77778899999999 887653322111000 000
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCC-CchHHHHHHHHHcCCcEEEEec
Q 003985 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYS-DGNLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 360 ~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~-~~~lva~llar~~gvp~v~t~H 438 (781)
........... ....+ .+...+.+.+.. .+||+||++.. ...+.+.+.++. ++|.+++.|
T Consensus 52 ~~~~~~~~~~~-----------~~~~~----~~~~~~~~~~~~---~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~ 112 (353)
T cd03811 52 KLIPVRVLKLK-----------SLRDL----LAILRLRRLLRK---EKPDVVISHLTTTPNVLALLAARL-GTKLIVWEH 112 (353)
T ss_pred hhhceeeeecc-----------cccch----hHHHHHHHHHHh---cCCCEEEEcCccchhHHHHHHhhc-CCceEEEEc
Confidence 00000110000 00111 112223333333 38999999998 555555555444 899999999
Q ss_pred CCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003985 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~ 518 (781)
+............+ ......++.+|.+++.|....+...+. .+. ..
T Consensus 113 ~~~~~~~~~~~~~~-------------~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~~~--~~ 158 (353)
T cd03811 113 NSLSLELKRKLRLL-------------LLIRKLYRRADKIVAVSEGVKEDLLKL-------------------LGI--PP 158 (353)
T ss_pred CcchhhhccchhHH-------------HHHHhhccccceEEEeccchhhhHHHh-------------------hcC--Cc
Confidence 87553321111000 224467889999999998765422111 111 14
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003985 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.+||||+|.+.+.+...... ..+. +.++++|+++||+.+.||++.+++++.++.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~---------------------~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~ 215 (353)
T cd03811 159 DKIEVIYNPIDIEEIRALAEEPL---------------------ELGI--PPDGPVILAVGRLSPQKGFDTLIRAFALLR 215 (353)
T ss_pred cccEEecCCcChhhcCcccchhh---------------------hcCC--CCCceEEEEEecchhhcChHHHHHHHHHhh
Confidence 68999999999887765432211 0122 456789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCC
Q 003985 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (781)
Q Consensus 599 ~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 678 (781)
+..++++|+++|+++. .+.+.++++++++.++|.|.|... ++..+++. +|++|+||.+|+|
T Consensus 216 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g~~~------~~~~~~~~-~d~~i~ps~~e~~ 276 (353)
T cd03811 216 KEGPDARLVILGDGPL------------REELEALAKELGLADRVHFLGFQS------NPYPYLKA-ADLFVLSSRYEGF 276 (353)
T ss_pred hcCCCceEEEEcCCcc------------HHHHHHHHHhcCCCccEEEecccC------CHHHHHHh-CCEEEeCcccCCC
Confidence 8778999999999876 566778899999999999999532 46778885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcC
Q 003985 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLV 755 (781)
Q Consensus 679 GltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ys 755 (781)
|++++|||+||+|||+|+.||..|++.++.+|++++++|.+++++.+..+ ..+..+++.++++++++++.+.++|+
T Consensus 277 ~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 277 PNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALAL-LDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred CcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHH-HhccCChHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999996544433 45668999999999999999999886
No 54
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=100.00 E-value=9.2e-32 Score=290.58 Aligned_cols=353 Identities=15% Similarity=0.189 Sum_probs=243.7
Q ss_pred EEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCC
Q 003985 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++|++..| ..+||.+.++. .|+++|.++||+|+ +++............
T Consensus 1 kIl~i~~~~~~--------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~~--------- 51 (359)
T cd03823 1 RILVVNHLYPP--------RSVGGAEVVAH--------DLAEALAKRGHEVA----VLTAGEDPPRQDKEV--------- 51 (359)
T ss_pred CeeEEcccCCc--------ccccchHHHHH--------HHHHHHHhcCCceE----EEeCCCCCCCccccc---------
Confidence 68999965543 34799999999 67777889999999 887653322111000
Q ss_pred CCeEEEEecc--CCCcccccccccccCchhhH-HHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEE
Q 003985 360 EHTHILRVPF--RSEKGILRQWISRFDVWPYL-ETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCT 435 (781)
Q Consensus 360 ~~~~I~rvP~--~~~~~~~~~~isr~~i~~yl-~~f~~~~~~~i~~~l~~~pDIIh~~~~~~-~lva~llar~~gvp~v~ 435 (781)
.+..+...+. ....... ........+. ..+...+.+.+.. .+||+||+|.... .......++..++|+++
T Consensus 52 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~ 125 (359)
T cd03823 52 IGVVVYGRPIDEVLRSALP---RDLFHLSDYDNPAVVAEFARLLED---FRPDVVHFHHLQGLGVSILRAARDRGIPIVL 125 (359)
T ss_pred ccceeeccccccccCCCch---hhhhHHHhccCHHHHHHHHHHHHH---cCCCEEEECCccchHHHHHHHHHhcCCCEEE
Confidence 0111111110 0000000 0000000010 1112222333332 4899999998754 34445566778999999
Q ss_pred EecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCC
Q 003985 436 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 515 (781)
Q Consensus 436 t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~ 515 (781)
+.|+....... . .......|.++++|....+...+. +..
T Consensus 126 ~~hd~~~~~~~------~---------------~~~~~~~d~ii~~s~~~~~~~~~~--------------------~~~ 164 (359)
T cd03823 126 TLHDYWLICPR------Q---------------GLFKKGGDAVIAPSRFLLDRYVAN--------------------GLF 164 (359)
T ss_pred EEeeeeeecch------h---------------hhhccCCCEEEEeCHHHHHHHHHc--------------------CCC
Confidence 99975432210 0 011123399999998765522111 111
Q ss_pred CCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHH
Q 003985 516 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYG 595 (781)
Q Consensus 516 ~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~ 595 (781)
..++.+|+||+|...+.+... +. +.++++|+++||+.+.||++.++++++
T Consensus 165 --~~~~~vi~n~~~~~~~~~~~~--------------------------~~--~~~~~~i~~~G~~~~~k~~~~li~~~~ 214 (359)
T cd03823 165 --AEKISVIRNGIDLDRAKRPRR--------------------------AP--PGGRLRFGFIGQLTPHKGVDLLLEAFK 214 (359)
T ss_pred --ccceEEecCCcChhhcccccc--------------------------CC--CCCceEEEEEecCccccCHHHHHHHHH
Confidence 468999999999877654321 01 356788999999999999999999999
Q ss_pred HhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC-
Q 003985 596 KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF- 674 (781)
Q Consensus 596 ~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~- 674 (781)
++.+ ++++|+++|++.. ........ +..++|.++| .++.+++..+++. +|++++||.
T Consensus 215 ~l~~--~~~~l~i~G~~~~------------~~~~~~~~---~~~~~v~~~g----~~~~~~~~~~~~~-ad~~i~ps~~ 272 (359)
T cd03823 215 RLPR--GDIELVIVGNGLE------------LEEESYEL---EGDPRVEFLG----AYPQEEIDDFYAE-IDVLVVPSIW 272 (359)
T ss_pred HHHh--cCcEEEEEcCchh------------hhHHHHhh---cCCCeEEEeC----CCCHHHHHHHHHh-CCEEEEcCcc
Confidence 9876 7899999999876 11111111 5668899999 6668899999995 999999997
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc
Q 003985 675 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERL 754 (781)
Q Consensus 675 ~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~y 754 (781)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|.++++++|.+++ +|++.+++++++++++...
T Consensus 273 ~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~-- 346 (359)
T cd03823 273 PENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLI----DDPDLLERLRAGIEPPRSI-- 346 (359)
T ss_pred cCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHH----hChHHHHHHHHhHHHhhhH--
Confidence 7999999999999999999999999999999999999999999999999998887 7999999999999887743
Q ss_pred CcchhhhccchHHHHH
Q 003985 755 VVSSDGIVDPSPFVIN 770 (781)
Q Consensus 755 sw~~~~il~~ye~ll~ 770 (781)
..+++.|++++.
T Consensus 347 ----~~~~~~~~~~~~ 358 (359)
T cd03823 347 ----EDQAEEYLKLYR 358 (359)
T ss_pred ----HHHHHHHHHHhh
Confidence 445566776653
No 55
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=100.00 E-value=1.4e-31 Score=287.18 Aligned_cols=351 Identities=17% Similarity=0.228 Sum_probs=253.9
Q ss_pred EEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCC
Q 003985 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++++. .||...++. .|++.|.++||+|+ +++....... ....
T Consensus 1 kIl~i~~~-------------~~g~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~----------~~~~ 45 (359)
T cd03808 1 KILHIVTV-------------DGGLYSFRL--------PLIKALRAAGYEVH----VVAPPGDELE----------ELEA 45 (359)
T ss_pred CeeEEEec-------------chhHHHHHH--------HHHHHHHhcCCeeE----EEecCCCccc----------cccc
Confidence 57888753 368888888 77778899999999 8876633211 0112
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHH-HcCCcEEEEec
Q 003985 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAY-KMGITQCTIAH 438 (781)
Q Consensus 360 ~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar-~~gvp~v~t~H 438 (781)
.++.++.+|..... .+ .+..+. ....+.+.+. ..+||+||++...+...+.+.++ ..+.+++.+.|
T Consensus 46 ~~~~~~~~~~~~~~------~~---~~~~~~-~~~~~~~~~~---~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (359)
T cd03808 46 LGVKVIPIPLDRRG------IN---PFKDLK-ALLRLYRLLR---KERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVH 112 (359)
T ss_pred CCceEEeccccccc------cC---hHhHHH-HHHHHHHHHH---hcCCCEEEEccccchhHHHHHHHHcCCCCEEEEec
Confidence 25667776665411 11 111111 1112233333 34899999998877777777776 45567777888
Q ss_pred CCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003985 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~ 518 (781)
+........ ....+ .+. ..+...++.+|.+++.|....+...+. .+.+ ..
T Consensus 113 ~~~~~~~~~-~~~~~----~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~~~~-~~ 162 (359)
T cd03808 113 GLGFVFTSG-GLKRR----LYL-----LLERLALRFTDKVIFQNEDDRDLALKL-------------------GIIK-KK 162 (359)
T ss_pred Ccchhhccc-hhHHH----HHH-----HHHHHHHhhccEEEEcCHHHHHHHHHh-------------------cCCC-cC
Confidence 754332111 11111 111 234567788999999998776522111 0111 13
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003985 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.++++|+|.+.+.+.... .+.++++|+++|++.+.||++.+++++..+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~ 214 (359)
T cd03808 163 KTVLIPGSGVDLDRFSPSPEP----------------------------IPEDDPVFLFVARLLKDKGIDELLEAARILK 214 (359)
T ss_pred ceEEecCCCCChhhcCccccc----------------------------cCCCCcEEEEEeccccccCHHHHHHHHHHHH
Confidence 577788999998766443210 0346789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHH-HHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCC
Q 003985 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHE-LMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (781)
Q Consensus 599 ~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~-li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 677 (781)
+..++++|+|+|++... ..... ++.+++..++|+|+|. .+++..+++. +|++++||..|+
T Consensus 215 ~~~~~~~l~i~G~~~~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~i~ps~~e~ 275 (359)
T cd03808 215 AKGPNVRLLLVGDGDEE------------NPAAILEIEKLGLEGRVEFLGF------RDDVPELLAA-ADVFVLPSYREG 275 (359)
T ss_pred hcCCCeEEEEEcCCCcc------------hhhHHHHHHhcCCcceEEEeec------cccHHHHHHh-ccEEEecCcccC
Confidence 87889999999999761 11111 3667778889999995 3468888885 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcc
Q 003985 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVS 757 (781)
Q Consensus 678 fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~ 757 (781)
||++++|||+||+|||+|+.++..|++.++.+|++++++|+++++++|.+++ .|++.++++++++++++.++|||+
T Consensus 276 ~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 351 (359)
T cd03808 276 LPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLI----EDPELRARMGQAARKRAEEEFDEE 351 (359)
T ss_pred cchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHH
Confidence 9999999999999999999999999999999999999999999999998876 899999999999999999999997
Q ss_pred hh
Q 003985 758 SD 759 (781)
Q Consensus 758 ~~ 759 (781)
..
T Consensus 352 ~~ 353 (359)
T cd03808 352 IV 353 (359)
T ss_pred HH
Confidence 64
No 56
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=100.00 E-value=3.2e-32 Score=295.72 Aligned_cols=359 Identities=19% Similarity=0.222 Sum_probs=252.3
Q ss_pred EEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCC
Q 003985 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+|++.+..++ ..||++.|+. +|+++|.+.||+|+ +++............ ...
T Consensus 1 ~ili~~~~~~~~--------~~gG~~~~~~--------~l~~~L~~~~~~v~----~~~~~~~~~~~~~~~-----~~~- 54 (365)
T cd03809 1 RILIDARFLASR--------RPTGIGRYAR--------ELLRALLKLDPEEV----LLLLPGAPGLLLLPL-----RAA- 54 (365)
T ss_pred CEEEechhhhcC--------CCCcHHHHHH--------HHHHHHHhcCCceE----EEEecCccccccccc-----hhc-
Confidence 688888665521 5799999999 77778899999999 777663321111000 000
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003985 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (781)
Q Consensus 360 ~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~ 439 (781)
... . ... .....+.............+. ..+||+||+++...... +..++|+++++|+
T Consensus 55 --~~~--~-~~~---------~~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~-----~~~~~~~i~~~hd 112 (365)
T cd03809 55 --LRL--L-LRL---------PRRLLWGLLFLLRAGDRLLLL---LLGLDLLHSPHNTAPLL-----RLRGVPVVVTIHD 112 (365)
T ss_pred --ccc--c-ccc---------ccccccchhhHHHHHHHHHhh---hcCCCeeeecccccCcc-----cCCCCCEEEEecc
Confidence 000 0 000 001111111111111111121 24899999998776443 6679999999998
Q ss_pred CccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003985 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (781)
Q Consensus 440 l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~ 519 (781)
+............ .... ........++.+|.++++|...++.+.+. .++ ...
T Consensus 113 ~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~d~~i~~s~~~~~~~~~~-------------------~~~--~~~ 164 (365)
T cd03809 113 LIPLRFPEYFSPG--FRRY-----FRRLLRRALRRADAIITVSEATKRDLLRY-------------------LGV--PPD 164 (365)
T ss_pred chhhhCcccCCHH--HHHH-----HHHHHHHHHHHcCEEEEccHHHHHHHHHH-------------------hCc--CHH
Confidence 7654433211111 0001 11234568899999999998776532211 111 256
Q ss_pred ceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhc
Q 003985 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (781)
Q Consensus 520 k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~ 599 (781)
++.++|||+|...+.+..... +.. ... ..++++|+++||+.+.||++.+++++.++.+
T Consensus 165 ~~~vi~~~~~~~~~~~~~~~~-~~~-------------------~~~--~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~ 222 (365)
T cd03809 165 KIVVIPLGVDPRFRPPPAEAE-VLR-------------------ALY--LLPRPYFLYVGTIEPRKNLERLLEAFARLPA 222 (365)
T ss_pred HEEeeccccCccccCCCchHH-HHH-------------------Hhc--CCCCCeEEEeCCCccccCHHHHHHHHHHHHH
Confidence 899999999998876654332 110 111 4567899999999999999999999999998
Q ss_pred cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCc
Q 003985 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFG 679 (781)
Q Consensus 600 ~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fG 679 (781)
..++++|+++|.+... .....+.++++++.++|.|+| .++.+++..+++. +|++++||..|+||
T Consensus 223 ~~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~ps~~e~~~ 286 (365)
T cd03809 223 KGPDPKLVIVGKRGWL-----------NEELLARLRELGLGDRVRFLG----YVSDEELAALYRG-ARAFVFPSLYEGFG 286 (365)
T ss_pred hcCCCCEEEecCCccc-----------cHHHHHHHHHcCCCCeEEECC----CCChhHHHHHHhh-hhhhcccchhccCC
Confidence 7778999999987651 112223336778889999999 6677899999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003985 680 LTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 680 ltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~ 759 (781)
++++|||++|+|||+|+.|+..|++. .+|++++++|.++++++|.+++ .|++.+.++++++++.+ ++|||++.
T Consensus 287 ~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~sw~~~ 359 (365)
T cd03809 287 LPVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALAAAIERLL----EDPALREELRERGLARA-KRFSWEKT 359 (365)
T ss_pred CCHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHH-HhCCHHHH
Confidence 99999999999999999999999984 5799999999999999998876 89999999999999655 88999775
No 57
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=100.00 E-value=4.3e-31 Score=284.31 Aligned_cols=362 Identities=21% Similarity=0.287 Sum_probs=261.5
Q ss_pred cccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccc
Q 003985 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWI 380 (781)
Q Consensus 301 ~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvP~~~~~~~~~~~i 380 (781)
.||...++. .+++.|.+.||+|+ +++............ ... .....+.... ...+.
T Consensus 13 ~~g~~~~~~--------~~~~~l~~~g~~v~----v~~~~~~~~~~~~~~------~~~---~~~~~~~~~~---~~~~~ 68 (377)
T cd03798 13 NGGGGIFVK--------ELARALAKRGVEVT----VLAPGPWGPKLLDLL------KGR---LVGVERLPVL---LPVVP 68 (377)
T ss_pred CchHHHHHH--------HHHHHHHHCCCceE----EEecCCCCCCchhhc------ccc---cccccccccC---cchhh
Confidence 588888888 77788899999999 887664332111000 000 0000000000 00000
Q ss_pred cccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccc
Q 003985 381 SRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKY 459 (781)
Q Consensus 381 sr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y 459 (781)
... .......+...+.+.+.. ...+||+||+++... .+.+..+++..++|++.+.|+..........
T Consensus 69 ~~~-~~~~~~~~~~~~~~~l~~-~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~---------- 136 (377)
T cd03798 69 LLK-GPLLYLLAARALLKLLKL-KRFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR---------- 136 (377)
T ss_pred ccc-cchhHHHHHHHHHHHHhc-ccCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh----------
Confidence 000 011112233333333431 145899999997664 6677788888899999999986554322111
Q ss_pred cchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHH
Q 003985 460 HFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK 539 (781)
Q Consensus 460 ~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~ 539 (781)
.........++.+|.+++.|....+...+. + .+..++.++|||+|...+.+....
T Consensus 137 ---~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--------------------~--~~~~~~~~i~~~~~~~~~~~~~~~ 191 (377)
T cd03798 137 ---LLRALLRRALRRADAVIAVSEALADELKAL--------------------G--IDPEKVTVIPNGVDTERFSPADRA 191 (377)
T ss_pred ---hHHHHHHHHHhcCCeEEeCCHHHHHHHHHh--------------------c--CCCCceEEcCCCcCcccCCCcchH
Confidence 011224457889999999998876522111 1 226799999999999887765432
Q ss_pred HHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCc
Q 003985 540 QKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSK 619 (781)
Q Consensus 540 ~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~ 619 (781)
.. . ..+. ..+++.++++|++.+.||++.+++++..+.+..++++|+|+|.+..
T Consensus 192 ~~--~------------------~~~~--~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~----- 244 (377)
T cd03798 192 EA--R------------------KLGL--PEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPL----- 244 (377)
T ss_pred HH--H------------------hccC--CCCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcc-----
Confidence 21 0 0122 4567889999999999999999999999987788999999999876
Q ss_pred chHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc
Q 003985 620 DREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG 699 (781)
Q Consensus 620 d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG 699 (781)
.+.+.++++++++.++|.+.| .++.+++..+++. +|++++|+..|++|++++|||+||+|||+|+.|+
T Consensus 245 -------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~ 312 (377)
T cd03798 245 -------REALEALAAELGLEDRVTFLG----AVPHEEVPAYYAA-ADVFVLPSLREGFGLVLLEAMACGLPVVATDVGG 312 (377)
T ss_pred -------hHHHHHHHHhcCCcceEEEeC----CCCHHHHHHHHHh-cCeeecchhhccCChHHHHHHhcCCCEEEecCCC
Confidence 567778888899999999999 6778899999995 9999999999999999999999999999999999
Q ss_pred cccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003985 700 PAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 700 ~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll~ 770 (781)
..|++.++.+|++++++|+++++++|.+++ .++.. +++.++++.+.++|||+. +.+.|.+++.
T Consensus 313 ~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~--~~~~~~~~~~~~~~s~~~--~~~~~~~~~~ 375 (377)
T cd03798 313 IPEIITDGENGLLVPPGDPEALAEAILRLL----ADPWL--RLGRAARRRVAERFSWEN--VAERLLELYR 375 (377)
T ss_pred hHHHhcCCcceeEECCCCHHHHHHHHHHHh----cCcHH--HHhHHHHHHHHHHhhHHH--HHHHHHHHHh
Confidence 999999999999999999999999998887 77776 788899999999999975 4455665554
No 58
>PRK10125 putative glycosyl transferase; Provisional
Probab=100.00 E-value=7.8e-32 Score=303.26 Aligned_cols=278 Identities=15% Similarity=0.084 Sum_probs=189.1
Q ss_pred CCCceEEEEcCCCc---hHHHH------HHHHHcCCcEEEEecCCcccc----CCCChhhHhhhh-----------cccc
Q 003985 405 QGFPDFIIGNYSDG---NLVAS------LLAYKMGITQCTIAHALEKTK----YPDSDIYWKKFD-----------EKYH 460 (781)
Q Consensus 405 ~~~pDIIh~~~~~~---~lva~------llar~~gvp~v~t~H~l~~~k----~~~s~~~~k~~~-----------~~y~ 460 (781)
..+|||||.|...+ ++... +..+..++|+|.|.|+.+... +...-..|+.-. ..+.
T Consensus 92 ~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d 171 (405)
T PRK10125 92 TPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVD 171 (405)
T ss_pred ccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccc
Confidence 45899999998776 33211 112345799999999987542 110000111100 0001
Q ss_pred ch-----hhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCC
Q 003985 461 FS-----CQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFP 535 (781)
Q Consensus 461 f~-----~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p 535 (781)
.+ .+...-....+.++.+|++|...++.... ... ..++.|||||+|.+.+.+
T Consensus 172 ~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~---------------------~~~--~~~i~vI~NGid~~~~~~ 228 (405)
T PRK10125 172 RAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNS---------------------LYG--PGRCRIINNGIDMATEAI 228 (405)
T ss_pred hHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHH---------------------HcC--CCCEEEeCCCcCcccccc
Confidence 11 11111112234578999999877652111 011 468999999999754332
Q ss_pred CcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeec--cCCCChHHHHHHHHHhhccCCCeEEEEEeCcC
Q 003985 536 YSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARL--DHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 613 (781)
Q Consensus 536 ~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL--~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~ 613 (781)
...... .. .++++++|+++|+. .+.||+..|++|+.++. ++++|+|+|+++
T Consensus 229 ~~~~~~----------------------~~--~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~---~~~~L~ivG~g~ 281 (405)
T PRK10125 229 LAELPP----------------------VR--ETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG---DKIELHTFGKFS 281 (405)
T ss_pred cccccc----------------------cc--cCCCCCEEEEEEeccccCCccHHHHHHHHHhCC---CCeEEEEEcCCC
Confidence 211100 00 03467889999994 46899999999998863 479999999975
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEE
Q 003985 614 DVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTF 693 (781)
Q Consensus 614 ~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVI 693 (781)
. . ...+|.++|+.. +..++..+|+. +|+||+||.+|+||++++||||||+|||
T Consensus 282 ~------------~-----------~~~~v~~~g~~~---~~~~l~~~y~~-aDvfV~pS~~Egfp~vilEAmA~G~PVV 334 (405)
T PRK10125 282 P------------F-----------TAGNVVNHGFET---DKRKLMSALNQ-MDALVFSSRVDNYPLILCEALSIGVPVI 334 (405)
T ss_pred c------------c-----------cccceEEecCcC---CHHHHHHHHHh-CCEEEECCccccCcCHHHHHHHcCCCEE
Confidence 4 0 024688898644 35688889995 9999999999999999999999999999
Q ss_pred EcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHH----HHHHHHHHHHHhcCcchhhhccchHHHH
Q 003985 694 ATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKK----ISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 694 aT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~----~s~~a~~~v~~~ysw~~~~il~~ye~ll 769 (781)
+|+.||.+|++.++ +|++++|+|++++|+.+ ++...++ +.+++++++.++|||+. +++.|.+++
T Consensus 335 at~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~---------~~~~~~~~~~~~~~~~r~~~~~~fs~~~--~~~~y~~lY 402 (405)
T PRK10125 335 ATHSDAAREVLQKS-GGKTVSEEEVLQLAQLS---------KPEIAQAVFGTTLAEFSQRSRAAYSGQQ--MLEEYVNFY 402 (405)
T ss_pred EeCCCChHHhEeCC-cEEEECCCCHHHHHhcc---------CHHHHHHhhhhHHHHHHHHHHHhCCHHH--HHHHHHHHH
Confidence 99999999999775 89999999999999854 4444443 34568999999999965 556677776
Q ss_pred Hh
Q 003985 770 NV 771 (781)
Q Consensus 770 ~~ 771 (781)
..
T Consensus 403 ~~ 404 (405)
T PRK10125 403 QN 404 (405)
T ss_pred Hh
Confidence 43
No 59
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=3.5e-32 Score=305.00 Aligned_cols=284 Identities=12% Similarity=0.098 Sum_probs=202.1
Q ss_pred CCCceEEEEcCCCchHHHHHHH-HHcCCcEEEEecCCccccCCCChhhHh-hhhccccchh--hhhHHHHHHhhCCEEEe
Q 003985 405 QGFPDFIIGNYSDGNLVASLLA-YKMGITQCTIAHALEKTKYPDSDIYWK-KFDEKYHFSC--QFTADLIAMNNADFIIT 480 (781)
Q Consensus 405 ~~~pDIIh~~~~~~~lva~lla-r~~gvp~v~t~H~l~~~k~~~s~~~~k-~~~~~y~f~~--~~~~e~~a~~~AD~IIt 480 (781)
..++|+||+++.... ..+. +..++|.+++.|+++...+........ .....|+... ....|...++.+|.|++
T Consensus 102 ~~~~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~ 178 (397)
T TIGR03087 102 AEPVDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPLRWIYRREGRLLLAYERAIAARFDAATF 178 (397)
T ss_pred hCCCCEEEEeccccc---eeccccccCCCeEeehhhHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHhhCCeEEE
Confidence 358999999875432 2222 356899999999864322110000000 0001111100 11246778899999999
Q ss_pred cCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccc
Q 003985 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (781)
Q Consensus 481 ~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~ 560 (781)
+|..+.+.+++. .+. ...++.+||||+|.+.|.+.....
T Consensus 179 ~S~~~~~~l~~~-------------------~~~--~~~~v~vipngvd~~~f~~~~~~~-------------------- 217 (397)
T TIGR03087 179 VSRAEAELFRRL-------------------APE--AAGRITAFPNGVDADFFSPDRDYP-------------------- 217 (397)
T ss_pred cCHHHHHHHHHh-------------------CCC--CCCCeEEeecccchhhcCCCcccc--------------------
Confidence 999886632211 011 146899999999998876542110
Q ss_pred ccccCCCCCCCCCEEEEEeeccCCCChHHHH----HHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHH
Q 003985 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLV----ECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT 636 (781)
Q Consensus 561 ~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~Li----eA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~e 636 (781)
..+ .+++++|+|+||+++.||++.++ +++..+.+..|+++|+|+|+|+. +. +++
T Consensus 218 ---~~~--~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~-------------~~----~~~ 275 (397)
T TIGR03087 218 ---NPY--PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS-------------PA----VRA 275 (397)
T ss_pred ---CCC--CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh-------------HH----HHH
Confidence 011 24567899999999999999988 55666766778999999999965 11 233
Q ss_pred cCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECC
Q 003985 637 YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDP 715 (781)
Q Consensus 637 l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p 715 (781)
++..++|+|+|+++ ++..+++. +|++|+||. .||+|++++|||+||+|||+|+.|+. .+...+++|++++
T Consensus 276 l~~~~~V~~~G~v~------~~~~~~~~-adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv~- 346 (397)
T TIGR03087 276 LAALPGVTVTGSVA------DVRPYLAH-AAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLVA- 346 (397)
T ss_pred hccCCCeEEeeecC------CHHHHHHh-CCEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEeC-
Confidence 44457899999543 47788885 999999997 69999999999999999999987643 3444456799996
Q ss_pred CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003985 716 YHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 716 ~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll 769 (781)
+|+++++++|.+++ +|++.+++|+++|++++.++|||++ +++.|++++
T Consensus 347 ~~~~~la~ai~~ll----~~~~~~~~~~~~ar~~v~~~fsw~~--~~~~~~~~l 394 (397)
T TIGR03087 347 ADPADFAAAILALL----ANPAEREELGQAARRRVLQHYHWPR--NLARLDALL 394 (397)
T ss_pred CCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHhCCHHH--HHHHHHHHh
Confidence 89999999998887 8999999999999999999999965 556777776
No 60
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=100.00 E-value=2.1e-31 Score=306.36 Aligned_cols=280 Identities=19% Similarity=0.248 Sum_probs=210.9
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCC--hhhHhhhhccccchhhhhHHHHHHhhCCEEEecC
Q 003985 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDS--DIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 482 (781)
Q Consensus 405 ~~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s--~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 482 (781)
..++||+|++.+.....+ ++.....+|.+.++|+-........ ...|+ ..|.+ ....++.+|.||++|
T Consensus 209 ~~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~---~~y~~------~~~~~~~~D~iI~~S 278 (500)
T TIGR02918 209 LTKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSESATNETYILWN---NYYEY------QFSNADYIDFFITAT 278 (500)
T ss_pred CCCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCccCcchhHHHH---HHHHH------HHhchhhCCEEEECC
Confidence 458999999776643323 4455668999999997443222111 11122 11211 123467799999999
Q ss_pred HHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccc
Q 003985 483 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (781)
Q Consensus 483 ~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~ 562 (781)
....+.+.+.+++| +. ..+++.+||||++...+.|..
T Consensus 279 ~~~~~~l~~~~~~~----------------~~--~~~ki~viP~g~~~~~~~~~~------------------------- 315 (500)
T TIGR02918 279 DIQNQILKNQFKKY----------------YN--IEPRIYTIPVGSLDELQYPEQ------------------------- 315 (500)
T ss_pred HHHHHHHHHHhhhh----------------cC--CCCcEEEEcCCCcccccCccc-------------------------
Confidence 87655333332222 11 156899999998754332210
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003985 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~ 642 (781)
...+..|+++||+.+.||++.|++|++++.+..|+++|+|+|+|+. .+.++++++++++.++
T Consensus 316 ------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~------------~~~l~~~i~~~~l~~~ 377 (500)
T TIGR02918 316 ------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGE------------KQKLQKIINENQAQDY 377 (500)
T ss_pred ------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECchh------------HHHHHHHHHHcCCCCe
Confidence 1234579999999999999999999999988889999999999976 5789999999999999
Q ss_pred EEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCCeEEEECCC----C
Q 003985 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-GPAEIIEHGASGFHIDPY----H 717 (781)
Q Consensus 643 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~G-G~~EiI~dg~~G~lv~p~----d 717 (781)
|.|+|. .+ +..+++ .+|++|+||.+||||++++||||||+|||+|+.+ |++|+|++|.+|++++++ |
T Consensus 378 V~f~G~----~~---~~~~~~-~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d 449 (500)
T TIGR02918 378 IHLKGH----RN---LSEVYK-DYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDD 449 (500)
T ss_pred EEEcCC----CC---HHHHHH-hCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccc
Confidence 999994 22 445566 5999999999999999999999999999999986 899999999999999843 3
Q ss_pred ----HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHh
Q 003985 718 ----PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINV 771 (781)
Q Consensus 718 ----~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll~~ 771 (781)
++++|++|.+++ . ++.+++|+++|++.+ ++|||+ .+++.|+++++.
T Consensus 450 ~~~~~~~la~~I~~ll----~-~~~~~~~~~~a~~~a-~~fs~~--~v~~~w~~ll~~ 499 (500)
T TIGR02918 450 EDQIITALAEKIVEYF----N-SNDIDAFHEYSYQIA-EGFLTA--NIIEKWKKLVRE 499 (500)
T ss_pred hhHHHHHHHHHHHHHh----C-hHHHHHHHHHHHHHH-HhcCHH--HHHHHHHHHHhh
Confidence 788888887765 4 557999999999977 789994 577889988864
No 61
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.98 E-value=1.8e-30 Score=292.51 Aligned_cols=271 Identities=16% Similarity=0.249 Sum_probs=215.1
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCc-EEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecC
Q 003985 405 QGFPDFIIGNYSDG-NLVASLLAYKMGIT-QCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 482 (781)
Q Consensus 405 ~~~pDIIh~~~~~~-~lva~llar~~gvp-~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 482 (781)
..++|++|+++... .+.+.+++++.+.+ ++.++|+..... ......+. ......++.+|.||++|
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--------~~~~~~~~-----~~~~~~~~~~d~ii~~S 191 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--------DRYPSGYI-----PLRRYLLSSLDAVFPCS 191 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--------hhccccch-----HHHHHHHhcCCEEEECC
Confidence 46788999876554 55566677777776 899999753211 01111111 11234678999999999
Q ss_pred HHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccc
Q 003985 483 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (781)
Q Consensus 483 ~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~ 562 (781)
....+.+++.. +....++.+++||+|...+.+..
T Consensus 192 ~~~~~~l~~~~---------------------~~~~~ki~vi~~gv~~~~~~~~~------------------------- 225 (407)
T cd04946 192 EQGRNYLQKRY---------------------PAYKEKIKVSYLGVSDPGIISKP------------------------- 225 (407)
T ss_pred HHHHHHHHHHC---------------------CCccccEEEEECCcccccccCCC-------------------------
Confidence 98766333221 12256889999999986553320
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCC--CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003985 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE--LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~--~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~ 640 (781)
...+++.|+++||+.+.||++.+++|+.++.+.+| ++.++++|+|+. .+.++++++++++.
T Consensus 226 -----~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~------------~~~l~~~~~~~~~~ 288 (407)
T cd04946 226 -----SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL------------EDTLKELAESKPEN 288 (407)
T ss_pred -----CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH------------HHHHHHHHHhcCCC
Confidence 02456789999999999999999999999988765 466788999876 56788888888888
Q ss_pred CcEEEeccccCcCChHHHHHHHHc-cCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCC-CH
Q 003985 641 GQFRWIAAQTNRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY-HP 718 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~-aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~-d~ 718 (781)
++|.|+| .++.+++..+++. .+|+||+||.+||||++++|||+||+|||+|+.||..|+|.++++|+++++. |+
T Consensus 289 ~~V~f~G----~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~ 364 (407)
T cd04946 289 ISVNFTG----ELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTP 364 (407)
T ss_pred ceEEEec----CCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCH
Confidence 8999999 6777899999974 3789999999999999999999999999999999999999999999999874 89
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003985 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 719 e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~ 759 (781)
++++++|.+++ +||+.+++|+++|++.+.++|||+..
T Consensus 365 ~~la~~I~~ll----~~~~~~~~m~~~ar~~~~~~f~~~~~ 401 (407)
T cd04946 365 NELVSSLSKFI----DNEEEYQTMREKAREKWEENFNASKN 401 (407)
T ss_pred HHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHHcCHHHh
Confidence 99999998887 79999999999999999999999764
No 62
>PLN02275 transferase, transferring glycosyl groups
Probab=99.97 E-value=9.9e-30 Score=283.09 Aligned_cols=318 Identities=13% Similarity=0.051 Sum_probs=213.6
Q ss_pred HHHHHHHHCCC-ceeeceeEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccccccCchh---hHHHH-
Q 003985 318 EMLLRIKRQGL-DISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWP---YLETF- 392 (781)
Q Consensus 318 eLa~~L~~~Gh-eV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvP~~~~~~~~~~~isr~~i~~---yl~~f- 392 (781)
.++.+|+++|+ +|+ |+|.... + .........+++|+++|......- ++ .++. |+...
T Consensus 23 ~~~~~l~~~~~~~v~----vi~~~~~---~-----~~~~~~~~~~v~v~r~~~~~~~~~----~~--~~~~~~~~~~~~~ 84 (371)
T PLN02275 23 YHALSLARQASFQVD----VVAYGGS---E-----PIPALLNHPSIHIHLMVQPRLLQR----LP--RVLYALALLLKVA 84 (371)
T ss_pred HHHHHHHhcCCceEE----EEEecCC---C-----CCHHHhcCCcEEEEECCCcccccc----cc--cchHHHHHHHHHH
Confidence 46667788876 799 8875321 1 111112234689999976211100 11 1222 23221
Q ss_pred --HHHHHHHHHHHcCCCceEEEEcCCCc---hHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhH
Q 003985 393 --TEDVGSEITAELQGFPDFIIGNYSDG---NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTA 467 (781)
Q Consensus 393 --~~~~~~~i~~~l~~~pDIIh~~~~~~---~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~ 467 (781)
...+...+.. ...+||+||+|.+.. .+.+.++++..++|++++.|+++..... ..... ....+++.. ..
T Consensus 85 ~~~~~~~~~~~~-~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~-~~~~~--~~~~~~~~~--~~ 158 (371)
T PLN02275 85 IQFLMLLWFLCV-KIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLA-LSLGR--SHPLVRLYR--WY 158 (371)
T ss_pred HHHHHHHHHHHh-hCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHh-cccCC--CCHHHHHHH--HH
Confidence 1112222111 145899999987553 4567778888899999999986421100 00000 000111111 23
Q ss_pred HHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhh
Q 003985 468 DLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH 547 (781)
Q Consensus 468 e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~ 547 (781)
+...++.||.||++|....+.+.+. .|+ ++.+||||. .+.|.|......
T Consensus 159 e~~~~~~ad~ii~~S~~~~~~l~~~-------------------~g~-----~i~vi~n~~-~~~f~~~~~~~~------ 207 (371)
T PLN02275 159 ERHYGKMADGHLCVTKAMQHELDQN-------------------WGI-----RATVLYDQP-PEFFRPASLEIR------ 207 (371)
T ss_pred HHHHHhhCCEEEECCHHHHHHHHHh-------------------cCC-----CeEEECCCC-HHHcCcCCchhc------
Confidence 6678899999999999876522111 122 278999984 455655322100
Q ss_pred cchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh-----------------ccCCCeEEEEEe
Q 003985 548 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS-----------------QLRELVNLVVVA 610 (781)
Q Consensus 548 ~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~-----------------~~~~~~~LvIVG 610 (781)
+. .+...+++++||+.+.||++.+++|+..+. +..++++|+|+|
T Consensus 208 ----------------~~---~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG 268 (371)
T PLN02275 208 ----------------LR---PNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITG 268 (371)
T ss_pred ----------------cc---CCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEe
Confidence 10 123457889999999999999999998873 235789999999
Q ss_pred CcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcC---CCCCCcHHHHHHHH
Q 003985 611 GYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA---FYEAFGLTVVEAMT 687 (781)
Q Consensus 611 ~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS---~~E~fGltvlEAMa 687 (781)
+|+. .++++++++++++++ +.|.+. .++.+++..+|+. +|++|.|+ ..|+||++++||||
T Consensus 269 ~G~~------------~~~l~~~~~~~~l~~-v~~~~~---~~~~~~~~~~l~~-aDv~v~~~~s~~~e~~p~~llEAmA 331 (371)
T PLN02275 269 KGPQ------------KAMYEEKISRLNLRH-VAFRTM---WLEAEDYPLLLGS-ADLGVSLHTSSSGLDLPMKVVDMFG 331 (371)
T ss_pred CCCC------------HHHHHHHHHHcCCCc-eEEEcC---CCCHHHHHHHHHh-CCEEEEeccccccccccHHHHHHHH
Confidence 9987 678999999999976 887662 4668899999995 99999863 24899999999999
Q ss_pred cCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHH
Q 003985 688 CGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADF 728 (781)
Q Consensus 688 ~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~ 728 (781)
||+|||+|+.||..|+|+++++|++++ |++++|++|.++
T Consensus 332 ~G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l 370 (371)
T PLN02275 332 CGLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLEL 370 (371)
T ss_pred CCCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHh
Confidence 999999999999999999999999997 799999999765
No 63
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.97 E-value=1.8e-29 Score=277.11 Aligned_cols=260 Identities=20% Similarity=0.244 Sum_probs=186.7
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhh------HhhhhccccchhhhhHHHHHHhhCCEE
Q 003985 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIY------WKKFDEKYHFSCQFTADLIAMNNADFI 478 (781)
Q Consensus 405 ~~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~------~k~~~~~y~f~~~~~~e~~a~~~AD~I 478 (781)
..++|+||++.... +..+.+..++|.+...|+.....+.....+ ++.....+-+......+..+++++|.|
T Consensus 81 ~~~~D~v~~~~~~~---~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 157 (351)
T cd03804 81 LSGYDLVISSSHAV---AKGVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYF 157 (351)
T ss_pred ccCCCEEEEcCcHH---hccccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 45899999876432 222225567888888886322111100000 000000000011112355678999999
Q ss_pred EecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcc
Q 003985 479 ITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPE 558 (781)
Q Consensus 479 It~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~ 558 (781)
+++|...++...+. +..+..+|+||+|.+.|.+..
T Consensus 158 i~~S~~~~~~~~~~------------------------~~~~~~vi~~~~d~~~~~~~~--------------------- 192 (351)
T cd03804 158 IANSRFVARRIKKY------------------------YGRDATVIYPPVDTDRFTPAE--------------------- 192 (351)
T ss_pred EECCHHHHHHHHHH------------------------hCCCcEEECCCCCHhhcCcCC---------------------
Confidence 99999876532111 134567999999987664421
Q ss_pred ccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC
Q 003985 559 QNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK 638 (781)
Q Consensus 559 ~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~ 638 (781)
..++.++++||+.+.||++.+++|+++++ ++|+|+|+|+. .+.+++ +
T Consensus 193 -----------~~~~~il~~G~~~~~K~~~~li~a~~~~~-----~~l~ivG~g~~------------~~~l~~-----~ 239 (351)
T cd03804 193 -----------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG-----KRLVVIGDGPE------------LDRLRA-----K 239 (351)
T ss_pred -----------CCCCEEEEEEcCccccChHHHHHHHHHCC-----CcEEEEECChh------------HHHHHh-----h
Confidence 23457899999999999999999998763 78999999965 333333 4
Q ss_pred CCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCH
Q 003985 639 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP 718 (781)
Q Consensus 639 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~ 718 (781)
..++|+|+| .++.+++..+++. +|++|+||. |+||++++|||+||+|||+|+.||..|++.++.+|++++++|+
T Consensus 240 ~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~ 313 (351)
T cd03804 240 AGPNVTFLG----RVSDEELRDLYAR-ARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTV 313 (351)
T ss_pred cCCCEEEec----CCCHHHHHHHHHh-CCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCH
Confidence 568999999 6778899999995 999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003985 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 719 e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~ 759 (781)
++++++|..++ +|++ .+.+++++++ ++|+|+..
T Consensus 314 ~~la~~i~~l~----~~~~---~~~~~~~~~~-~~~~~~~~ 346 (351)
T cd03804 314 ESLAAAVERFE----KNED---FDPQAIRAHA-ERFSESRF 346 (351)
T ss_pred HHHHHHHHHHH----hCcc---cCHHHHHHHH-HhcCHHHH
Confidence 99999998887 6763 2334445555 56888764
No 64
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.97 E-value=8.9e-29 Score=273.62 Aligned_cols=269 Identities=20% Similarity=0.254 Sum_probs=208.7
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCC-hhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHH
Q 003985 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDS-DIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (781)
Q Consensus 406 ~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s-~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (781)
.++|+||++....... .++......+.+.++|+......... ...|+ ..|. .....++.+|.||++|..
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~---~~~~------~~~~~~~~~d~ii~~s~~ 167 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLIN---NFYE------YVFENLDKVDGVIVATEQ 167 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCcccccccccc---hhhH------HHHhChhhCCEEEEccHH
Confidence 5899999988765333 23444455677889997543221110 01111 1111 112246789999999988
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccccc
Q 003985 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (781)
Q Consensus 485 ~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~ 564 (781)
..+.+.+.. +. ..++.+||||++...+.+...
T Consensus 168 ~~~~l~~~~-------------------~~---~~~v~~ip~g~~~~~~~~~~~-------------------------- 199 (372)
T cd04949 168 QKQDLQKQF-------------------GN---YNPIYTIPVGSIDPLKLPAQF-------------------------- 199 (372)
T ss_pred HHHHHHHHh-------------------CC---CCceEEEcccccChhhcccch--------------------------
Confidence 765332221 11 235889999999876654320
Q ss_pred CCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003985 565 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (781)
Q Consensus 565 g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~ 644 (781)
....+..++++||+.+.||++.+++++.++.+..|+++|+|+|.|+. ...+.++++++++.++|.
T Consensus 200 ---~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~ 264 (372)
T cd04949 200 ---KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDE------------EEKLKELIEELGLEDYVF 264 (372)
T ss_pred ---hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCch------------HHHHHHHHHHcCCcceEE
Confidence 02345689999999999999999999999998889999999999976 556778888999999999
Q ss_pred EeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCCeEEEECCCCHHHHHH
Q 003985 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-GPAEIIEHGASGFHIDPYHPDQAAE 723 (781)
Q Consensus 645 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~G-G~~EiI~dg~~G~lv~p~d~e~lA~ 723 (781)
|.|+. .++.++++. +|++|.||..|+||++++|||+||+|||+|+.+ |+.+++.++.+|++++++|++++++
T Consensus 265 ~~g~~------~~~~~~~~~-ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~ 337 (372)
T cd04949 265 LKGYT------RDLDEVYQK-AQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAE 337 (372)
T ss_pred EcCCC------CCHHHHHhh-hhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHH
Confidence 99943 357788885 999999999999999999999999999999987 8999999999999999999999999
Q ss_pred HHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003985 724 LMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 724 ~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~ 759 (781)
+|..++ .|++.|+++++++++.+ ++|||++.
T Consensus 338 ~i~~ll----~~~~~~~~~~~~a~~~~-~~~s~~~~ 368 (372)
T cd04949 338 AIIELL----NDPKLLQKFSEAAYENA-ERYSEENV 368 (372)
T ss_pred HHHHHH----cCHHHHHHHHHHHHHHH-HHhhHHHH
Confidence 998887 89999999999999995 89999653
No 65
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.96 E-value=1.1e-27 Score=274.05 Aligned_cols=270 Identities=11% Similarity=0.095 Sum_probs=190.5
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCc-hHH--HHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHH
Q 003985 395 DVGSEITAELQGFPDFIIGNYSDG-NLV--ASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIA 471 (781)
Q Consensus 395 ~~~~~i~~~l~~~pDIIh~~~~~~-~lv--a~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a 471 (781)
++.+.+.+ ..|||||.+.+.. ++. |..++++++ |+|.++|+.... |.... .....-.+..+.. . ..
T Consensus 425 dI~~~L~~---f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~e-Yl~~y----~~g~L~~~llk~l-~-~~ 493 (794)
T PLN02501 425 DTSQFIPS---KDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLE-YIKRE----KNGALQAFFVKHI-N-NW 493 (794)
T ss_pred HHHHHhhc---cCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHH-HHhHh----cchhHHHHHHHHH-H-HH
Confidence 34444443 4899999999876 677 888999999 899999986542 11100 0000000000000 0 12
Q ss_pred Hhh--CCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcc
Q 003985 472 MNN--ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGS 549 (781)
Q Consensus 472 ~~~--AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~ 549 (781)
+.. ||.|+++|..... +. ...+..| ||||.+.|.|......+
T Consensus 494 v~r~hcD~VIaPS~atq~--------------------------L~--~~vI~nV-nGVDte~F~P~~r~~~~------- 537 (794)
T PLN02501 494 VTRAYCHKVLRLSAATQD--------------------------LP--KSVICNV-HGVNPKFLKIGEKVAEE------- 537 (794)
T ss_pred HHHhhCCEEEcCCHHHHH--------------------------hc--ccceeec-ccccccccCCcchhHHH-------
Confidence 222 8999999965432 00 1122222 69999999886553322
Q ss_pred hhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHH
Q 003985 550 IEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEK 629 (781)
Q Consensus 550 i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~ 629 (781)
..+|. +...+.++|+|||.+.||++.|++|++++.+..++++|+|||+|+. .+.
T Consensus 538 ------------r~lgi--~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP~------------ree 591 (794)
T PLN02501 538 ------------RELGQ--QAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGED------------AHE 591 (794)
T ss_pred ------------HhcCC--ccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCcc------------HHH
Confidence 11343 2233458999999999999999999999887778999999999988 678
Q ss_pred HHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCe
Q 003985 630 MHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGAS 709 (781)
Q Consensus 630 l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~ 709 (781)
+++++.++++ +|.|+|.+.+ ...+|+ ++|+||+||.+|+||++++||||||+|||+|+.||.. ++.++.+
T Consensus 592 Le~la~eLgL--~V~FLG~~dd------~~~lya-saDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e-~V~~g~n 661 (794)
T PLN02501 592 VQRAAKRLDL--NLNFLKGRDH------ADDSLH-GYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNE-FFRSFPN 661 (794)
T ss_pred HHHHHHHcCC--EEEecCCCCC------HHHHHH-hCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCCc-eEeecCC
Confidence 8899999887 4999995432 335777 5999999999999999999999999999999999864 4777888
Q ss_pred EEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003985 710 GFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 710 G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~ 759 (781)
|+++ +|+++++++|.+++ .|+..+..+.+ ...|||++.
T Consensus 662 Gll~--~D~EafAeAI~~LL----sd~~~rl~~~a------~~~~SWeAa 699 (794)
T PLN02501 662 CLTY--KTSEDFVAKVKEAL----ANEPQPLTPEQ------RYNLSWEAA 699 (794)
T ss_pred eEec--CCHHHHHHHHHHHH----hCchhhhHHHH------HhhCCHHHH
Confidence 8875 69999999999888 56654433322 247899653
No 66
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.8e-27 Score=268.97 Aligned_cols=435 Identities=16% Similarity=0.151 Sum_probs=282.8
Q ss_pred eEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeee--
Q 003985 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV-- 356 (781)
Q Consensus 279 ~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v-- 356 (781)
|||+.+|.-.+| .-.+||..-.+- .|.+.|++.|++|. |+...++. ....+....+.+
T Consensus 1 M~Il~v~~E~~p-------~vK~GGLaDv~~--------alpk~L~~~g~~v~----v~lP~y~~-~~~~~~~~~~~~~~ 60 (487)
T COG0297 1 MKILFVASEIFP-------FVKTGGLADVVG--------ALPKALAKRGVDVR----VLLPSYPK-VQKEWRDLLKVVGK 60 (487)
T ss_pred CcceeeeeeecC-------ccccCcHHHHHH--------HhHHHHHhcCCeEE----EEcCCchh-hhhhhccccceeeE
Confidence 789988876654 246899888777 56677899999999 88877663 222222221111
Q ss_pred ----cC-CCCeEEEEeccCC--Cccc-c--ccccccc--Cc------hhhHHHHHHHHHHHHHHHcC--CCceEEEEcCC
Q 003985 357 ----SG-TEHTHILRVPFRS--EKGI-L--RQWISRF--DV------WPYLETFTEDVGSEITAELQ--GFPDFIIGNYS 416 (781)
Q Consensus 357 ----~~-~~~~~I~rvP~~~--~~~~-~--~~~isr~--~i------~~yl~~f~~~~~~~i~~~l~--~~pDIIh~~~~ 416 (781)
.+ .....++...... ..-+ + ....+|. .. +-.+..|...+...+-. .. ..|||||+|+|
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~-~~~~~~pDIvH~hDW 139 (487)
T COG0297 61 FGVLKGGRAQLFIVKEYGKDGGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELAPL-GLISWLPDIVHAHDW 139 (487)
T ss_pred eeeeecccceEEEEEeecccCCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHHhhh-cCCCCCCCEEEeecH
Confidence 00 0111111111100 0000 0 1111221 11 11233444333333322 12 37999999999
Q ss_pred CchHHHHHHHHH----cCCcEEEEecCCccccCCC-ChhhHhhhh-cccc-----chhhhhHHHHHHhhCCEEEecCHHH
Q 003985 417 DGNLVASLLAYK----MGITQCTIAHALEKTKYPD-SDIYWKKFD-EKYH-----FSCQFTADLIAMNNADFIITSTYQE 485 (781)
Q Consensus 417 ~~~lva~llar~----~gvp~v~t~H~l~~~k~~~-s~~~~k~~~-~~y~-----f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (781)
..++++.+++.. ..+|.|+|+|++..+.... ....+-.+. ..|+ +..+....+-.+..||.|.|+|+..
T Consensus 140 qt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptY 219 (487)
T COG0297 140 QTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTY 219 (487)
T ss_pred HHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHH
Confidence 999999999984 4799999999986654332 111111111 1111 1123344556788999999999988
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccC
Q 003985 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (781)
Q Consensus 486 ~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g 565 (781)
+..+... .| +..+.++.+ ....++.-|-||+|.+.+.|.++......--.........+.....+++|
T Consensus 220 a~Ei~t~--~~----g~gl~g~l~------~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~g 287 (487)
T COG0297 220 AGEIYTP--EY----GEGLEGLLS------WRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLG 287 (487)
T ss_pred HHhhccc--cc----cccchhhhh------hccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhC
Confidence 7644311 11 112222221 11357888999999999988765421100000001112223444556789
Q ss_pred CCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003985 566 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (781)
Q Consensus 566 ~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~f 645 (781)
+..+.+.|++.++||+..+||++.+++++..+.+.. +++++.|.|.. ...+.+..+++++.. ++..
T Consensus 288 L~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~~vilG~gd~----------~le~~~~~la~~~~~--~~~~ 353 (487)
T COG0297 288 LDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQLVLLGTGDP----------ELEEALRALASRHPG--RVLV 353 (487)
T ss_pred CCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ceEEEEecCcH----------HHHHHHHHHHHhcCc--eEEE
Confidence 876778899999999999999999999999998764 99999999933 567788888888753 4444
Q ss_pred eccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc--------CCeEEEECCCC
Q 003985 646 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH--------GASGFHIDPYH 717 (781)
Q Consensus 646 lG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~d--------g~~G~lv~p~d 717 (781)
.- .. ++.+.+.+...+|++++||++|+||++-++||..|++.|+..+||.+|.|.+ ..+|+++.+.+
T Consensus 354 ~i----~~-~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~ 428 (487)
T COG0297 354 VI----GY-DEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTN 428 (487)
T ss_pred Ee----ee-cHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCC
Confidence 33 22 3355555554799999999999999999999999999999999999998875 57999999999
Q ss_pred HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003985 718 PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 718 ~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll~ 770 (781)
+++++.+|.+.+.-....+..|+.+..++.. ..|+|+.++ ..|.+++.
T Consensus 429 ~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa--~~y~~lY~ 476 (487)
T COG0297 429 PDHLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSA--KEYVELYK 476 (487)
T ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHH--HHHHHHHH
Confidence 9999999998886555666669999998887 689998762 34544444
No 67
>PHA01630 putative group 1 glycosyl transferase
Probab=99.96 E-value=1.1e-27 Score=262.42 Aligned_cols=256 Identities=13% Similarity=0.090 Sum_probs=185.3
Q ss_pred EcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHH-HhhCCEEEecCHHHHhhccc
Q 003985 413 GNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIA-MNNADFIITSTYQEIAGTKN 491 (781)
Q Consensus 413 ~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a-~~~AD~IIt~S~~~~~~~k~ 491 (781)
.|+....+..+...++.|+|+++++|+... +. . ..+... .+.+|.||++|....+.+.+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~-------l~-----------~--~~~~~~~~~~ad~ii~~S~~~~~~l~~ 111 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTDA-------IS-----------H--TALYFFRNQPVDEIVVPSQWSKNAFYT 111 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeech-------hh-----------H--HHHHHHhhccCCEEEECCHHHHHHHHH
Confidence 444444455555556678999999997211 00 0 112334 67899999999887652211
Q ss_pred cccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCC
Q 003985 492 TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRS 571 (781)
Q Consensus 492 ~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~ 571 (781)
.|++. ..++.+||||+|.+.|.+.... ..+
T Consensus 112 --------------------~g~~~-~~~i~vIpNGVd~~~f~~~~~~-----------------------------~~~ 141 (331)
T PHA01630 112 --------------------SGLKI-PQPIYVIPHNLNPRMFEYKPKE-----------------------------KPH 141 (331)
T ss_pred --------------------cCCCC-CCCEEEECCCCCHHHcCCCccc-----------------------------cCC
Confidence 12221 3589999999998877553210 123
Q ss_pred CCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccC
Q 003985 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (781)
Q Consensus 572 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~ 651 (781)
+.++++.|++.+.||++.|++|++++.+..++++|+|+|++.. ..++ .++.+ +.|
T Consensus 142 ~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~------------~~~l------~~~~~---~~~---- 196 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNML------------DPRL------FGLNG---VKT---- 196 (331)
T ss_pred CEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCccc------------chhh------ccccc---eec----
Confidence 4567788899999999999999999988778999999997654 1111 12222 233
Q ss_pred cCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECC----------------
Q 003985 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDP---------------- 715 (781)
Q Consensus 652 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p---------------- 715 (781)
.++.+++..+|+. +|+||+||.+|+||++++||||||+|||+|+.||..|+|.++.+|+++++
T Consensus 197 ~v~~~~l~~~y~~-aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~ 275 (331)
T PHA01630 197 PLPDDDIYSLFAG-CDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGY 275 (331)
T ss_pred cCCHHHHHHHHHh-CCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccccc
Confidence 4677899999995 99999999999999999999999999999999999999999988887753
Q ss_pred ---CCHHHHHHHHHHHHHhccCC--HHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003985 716 ---YHPDQAAELMADFFGKCKEN--PSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 716 ---~d~e~lA~~I~~~l~~l~~d--p~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll~ 770 (781)
.|.+++++++.+++ .| ++.++++..++.+.+.++|||++ +++.|++++.
T Consensus 276 ~v~~~~~~~~~~ii~~l----~~~~~~~~~~~~~~~~~~~~~~fs~~~--ia~k~~~l~~ 329 (331)
T PHA01630 276 FLDPDIEDAYQKLLEAL----ANWTPEKKKENLEGRAILYRENYSYNA--IAKMWEKILE 329 (331)
T ss_pred ccCCCHHHHHHHHHHHH----hCCCHHHHHHHHHHHHHHHHHhCCHHH--HHHHHHHHHh
Confidence 27788888888777 44 24455555555566679999955 6677887774
No 68
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.95 E-value=2.4e-26 Score=260.92 Aligned_cols=319 Identities=16% Similarity=0.151 Sum_probs=199.7
Q ss_pred CCCceEEEEcCCCchHHHHHHH-HHcCCcEEEEecCCccccCCCC---hhhHh-------hhhccccchhhhhHHHHHHh
Q 003985 405 QGFPDFIIGNYSDGNLVASLLA-YKMGITQCTIAHALEKTKYPDS---DIYWK-------KFDEKYHFSCQFTADLIAMN 473 (781)
Q Consensus 405 ~~~pDIIh~~~~~~~lva~lla-r~~gvp~v~t~H~l~~~k~~~s---~~~~k-------~~~~~y~f~~~~~~e~~a~~ 473 (781)
.+++||+|+|.|..+..+..++ +..++|.|+|.|+....++... +++-. .-.....+..+...|..+..
T Consensus 146 ~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~ 225 (590)
T cd03793 146 DEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAH 225 (590)
T ss_pred CCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHh
Confidence 4689999999999999988888 5578999999999877664222 12211 00111223334456888999
Q ss_pred hCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhh
Q 003985 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 553 (781)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~ 553 (781)
.||.+||+|.......+..+ |. +..+ |||||+|.+.|.+..+..+.....+..|.+.
T Consensus 226 ~Ad~fttVS~it~~E~~~Ll-------------------~~--~pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f 282 (590)
T cd03793 226 CAHVFTTVSEITAYEAEHLL-------------------KR--KPDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEF 282 (590)
T ss_pred hCCEEEECChHHHHHHHHHh-------------------CC--CCCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHH
Confidence 99999999998876443321 21 1334 9999999999877654332211111222221
Q ss_pred ccCccccccccCCCCCCCCCEEEE-EeeccC-CCChHHHHHHHHHhhc----cCCC---eEEEEEeCcCCCCCCcchH--
Q 003985 554 LFDPEQNDEHVGTLSDRSKPIVFS-MARLDH-VKNMTGLVECYGKNSQ----LREL---VNLVVVAGYIDVNKSKDRE-- 622 (781)
Q Consensus 554 l~~~~~~~~~~g~l~~~~k~iIl~-vGRL~~-~Kgl~~LieA~~~l~~----~~~~---~~LvIVG~g~~~~~~~d~e-- 622 (781)
. ......++++ ++++++++| +||+.. .||++.+|+|++++.. ...+ +-|+|+-.+.. +.+.+
T Consensus 283 ~--~~~~~~~~~~--~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~---~~~~~~l 355 (590)
T cd03793 283 V--RGHFYGHYDF--DLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTN---NFNVESL 355 (590)
T ss_pred H--HHHHhhhcCC--CCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccC---CcCHHhh
Confidence 1 1112345665 667778777 799998 9999999999999864 1232 23444433311 00000
Q ss_pred --------HHHHHH------------------------------------------------------------HHHHHH
Q 003985 623 --------EIAEIE------------------------------------------------------------KMHELM 634 (781)
Q Consensus 623 --------e~~~~~------------------------------------------------------------~l~~li 634 (781)
-.+..+ .+-..+
T Consensus 356 ~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~ 435 (590)
T cd03793 356 KGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHI 435 (590)
T ss_pred cchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHH
Confidence 000001 111122
Q ss_pred HHcCCC----Cc--EEEecc---ccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccc----c
Q 003985 635 KTYKLD----GQ--FRWIAA---QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP----A 701 (781)
Q Consensus 635 ~el~L~----~~--V~flG~---~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~----~ 701 (781)
.+.+|. ++ |.|.+. .+|.+-..+.+.+++. +|+||+||++|+||++++|||+||+|||+|+.+|+ .
T Consensus 436 r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g-~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~ 514 (590)
T cd03793 436 RRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRG-CHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME 514 (590)
T ss_pred HHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhh-ceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH
Confidence 222332 22 444431 2233444567778884 99999999999999999999999999999999998 5
Q ss_pred cccccC-CeEEEEC-------CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH-HHHHHhcCcchh
Q 003985 702 EIIEHG-ASGFHID-------PYHPDQAAELMADFFGKCKENPSHWKKISDGGL-KRIYERLVVSSD 759 (781)
Q Consensus 702 EiI~dg-~~G~lv~-------p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~-~~v~~~ysw~~~ 759 (781)
|++.++ ..|+.+. +.+.++++++|.+++ .. +.++.+.++++ ++..+.|+|+..
T Consensus 515 E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~----~~-~~r~~~~~r~~~~r~s~~f~W~~~ 576 (590)
T cd03793 515 EHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFC----QL-SRRQRIIQRNRTERLSDLLDWRNL 576 (590)
T ss_pred HHhccCCCceEEEecCCccchHHHHHHHHHHHHHHh----CC-cHHHHHHHHHHHHHHHHhCCHHHH
Confidence 666555 3677776 344556666666554 33 56677666655 344488999876
No 69
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.95 E-value=2.3e-25 Score=245.98 Aligned_cols=343 Identities=13% Similarity=0.117 Sum_probs=230.9
Q ss_pred ceEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeec
Q 003985 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVS 357 (781)
Q Consensus 278 ~~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~ 357 (781)
||||+|++. | .||.+.... +|+++|.++||+|+ ++|..... . ....+.
T Consensus 1 ~~~i~i~~~-g------------~gG~~~~~~--------~la~~L~~~g~ev~----vv~~~~~~-~----~~~~~~-- 48 (357)
T PRK00726 1 MKKILLAGG-G------------TGGHVFPAL--------ALAEELKKRGWEVL----YLGTARGM-E----ARLVPK-- 48 (357)
T ss_pred CcEEEEEcC-c------------chHhhhHHH--------HHHHHHHhCCCEEE----EEECCCch-h----hhcccc--
Confidence 389888863 2 367777777 77888899999999 88764311 0 001111
Q ss_pred CCCCeEEEEeccCCCcccccccccccC-chhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEE
Q 003985 358 GTEHTHILRVPFRSEKGILRQWISRFD-VWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTI 436 (781)
Q Consensus 358 ~~~~~~I~rvP~~~~~~~~~~~isr~~-i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~v~t 436 (781)
.++++++++.....+. ...++.. .+.++ .....+.+.++ ..+||+||+|.+.+++.+.++++..++|++++
T Consensus 49 --~g~~~~~~~~~~~~~~--~~~~~l~~~~~~~-~~~~~~~~~ik---~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~ 120 (357)
T PRK00726 49 --AGIEFHFIPSGGLRRK--GSLANLKAPFKLL-KGVLQARKILK---RFKPDVVVGFGGYVSGPGGLAARLLGIPLVIH 120 (357)
T ss_pred --CCCcEEEEeccCcCCC--ChHHHHHHHHHHH-HHHHHHHHHHH---hcCCCEEEECCCcchhHHHHHHHHcCCCEEEE
Confidence 2577888876432110 0000000 11111 11112222232 34899999998777788888888899999987
Q ss_pred ecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCC
Q 003985 437 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 516 (781)
Q Consensus 437 ~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~ 516 (781)
.|+.... ....+.++.+|.+++++++... . .
T Consensus 121 ~~~~~~~----------------------~~~r~~~~~~d~ii~~~~~~~~---------------------~------~ 151 (357)
T PRK00726 121 EQNAVPG----------------------LANKLLARFAKKVATAFPGAFP---------------------E------F 151 (357)
T ss_pred cCCCCcc----------------------HHHHHHHHHhchheECchhhhh---------------------c------c
Confidence 6642110 1133567789999998874311 0 1
Q ss_pred CCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHH-HHHH
Q 003985 517 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLV-ECYG 595 (781)
Q Consensus 517 f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~Li-eA~~ 595 (781)
...++.+++||+|.+.+.+.... +++++ +++.++|+++|+....|++..++ +|+.
T Consensus 152 ~~~~i~vi~n~v~~~~~~~~~~~----------------------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~ 207 (357)
T PRK00726 152 FKPKAVVTGNPVREEILALAAPP----------------------ARLAG--REGKPTLLVVGGSQGARVLNEAVPEALA 207 (357)
T ss_pred CCCCEEEECCCCChHhhcccchh----------------------hhccC--CCCCeEEEEECCcHhHHHHHHHHHHHHH
Confidence 26799999999998765442211 12344 45677888999988888876655 8988
Q ss_pred HhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCC
Q 003985 596 KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY 675 (781)
Q Consensus 596 ~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~ 675 (781)
++.+. + ..++++|+|.. +.+.+..+ +++. |.|.|++ +++..+++. +|++|++|-
T Consensus 208 ~~~~~-~-~~~~~~G~g~~-------------~~~~~~~~-~~~~--v~~~g~~------~~~~~~~~~-~d~~i~~~g- 261 (357)
T PRK00726 208 LLPEA-L-QVIHQTGKGDL-------------EEVRAAYA-AGIN--AEVVPFI------DDMAAAYAA-ADLVICRAG- 261 (357)
T ss_pred HhhhC-c-EEEEEcCCCcH-------------HHHHHHhh-cCCc--EEEeehH------hhHHHHHHh-CCEEEECCC-
Confidence 88653 3 56778898853 33444445 6664 9999954 467888884 999999862
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccc--------cccccccCCeEEEECCCC--HHHHHHHHHHHHHhccCCHHHHHHHHHH
Q 003985 676 EAFGLTVVEAMTCGLPTFATCHGG--------PAEIIEHGASGFHIDPYH--PDQAAELMADFFGKCKENPSHWKKISDG 745 (781)
Q Consensus 676 E~fGltvlEAMa~GlPVIaT~~GG--------~~EiI~dg~~G~lv~p~d--~e~lA~~I~~~l~~l~~dp~~~~~~s~~ 745 (781)
+.+++|||+||+|||++..++ ..+.+.++++|+++++.| +++++++|.+++ +|++.+++|+++
T Consensus 262 ---~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~ 334 (357)
T PRK00726 262 ---ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELL----SDPERLEAMAEA 334 (357)
T ss_pred ---HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHH----cCHHHHHHHHHH
Confidence 689999999999999987643 236677788999999888 999999998887 899999999999
Q ss_pred HHHHHHHhcCcchhhhccchHHHH
Q 003985 746 GLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 746 a~~~v~~~ysw~~~~il~~ye~ll 769 (781)
+++++ +.++- ..+++.|.+++
T Consensus 335 ~~~~~-~~~~~--~~~~~~~~~~~ 355 (357)
T PRK00726 335 ARALG-KPDAA--ERLADLIEELA 355 (357)
T ss_pred HHhcC-CcCHH--HHHHHHHHHHh
Confidence 98876 44543 45667776654
No 70
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.94 E-value=3.1e-25 Score=253.63 Aligned_cols=315 Identities=14% Similarity=0.073 Sum_probs=211.4
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhh
Q 003985 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (781)
Q Consensus 396 ~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~ 474 (781)
....+.... ...|+|+.|.+...+++..+.++. ..|+++..|..++. +.. |..+. ....-...|-.
T Consensus 121 fa~~i~~~~-~~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~HipfP~----~e~-~~~lp-------~~~~ll~~~l~ 187 (460)
T cd03788 121 FADAIAEVL-RPGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPS----SEI-FRCLP-------WREELLRGLLG 187 (460)
T ss_pred HHHHHHHhc-CCCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCCCC----hHH-HhhCC-------ChHHHHHHHhc
Confidence 333444432 257999999998877777776553 58999999976542 221 22111 11122345667
Q ss_pred CCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhc
Q 003985 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLL 554 (781)
Q Consensus 475 AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l 554 (781)
+|.|...+........+.......... . ........|. ..++.++|||+|.+.|.+.......... +.
T Consensus 188 ~D~igF~t~~~~~~Fl~~~~~~l~~~~-~-~~~~i~~~g~---~~~i~vip~GID~~~f~~~~~~~~~~~~----~~--- 255 (460)
T cd03788 188 ADLIGFQTERYARNFLSCCSRLLGLEV-T-DDGGVEYGGR---RVRVGAFPIGIDPDAFRKLAASPEVQER----AA--- 255 (460)
T ss_pred CCEEEECCHHHHHHHHHHHHHHcCCcc-c-CCceEEECCE---EEEEEEEeCeEcHHHHHHHhcCchhHHH----HH---
Confidence 999999887654432221111000000 0 0001111121 3478999999999888654221110000 00
Q ss_pred cCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHHHHHHHHH
Q 003985 555 FDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAEIEKM 630 (781)
Q Consensus 555 ~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----~~LvIVG~g~~~~~~~d~ee~~~~~~l 630 (781)
+..+. .+++++|+++||+++.||+..+++|++++.+.+|+ ++|+++|++.. +..++..+..+.+
T Consensus 256 -------~~~~~--~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~---g~~~~~~~l~~~l 323 (460)
T cd03788 256 -------ELRER--LGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSR---TDVPEYQELRREV 323 (460)
T ss_pred -------HHHHh--cCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCC---cCcHHHHHHHHHH
Confidence 01222 35688999999999999999999999998877775 67999987532 1123344556667
Q ss_pred HHHHHHcCCC------CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCc----EEEcCcccc
Q 003985 631 HELMKTYKLD------GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFATCHGGP 700 (781)
Q Consensus 631 ~~li~el~L~------~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP----VIaT~~GG~ 700 (781)
++++++.+.. ..|++++ ..++.+++..+|+ ++|+||+||..||||++++|||+||+| ||+|+.+|.
T Consensus 324 ~~~v~~in~~~g~~~~~~v~~~~---g~v~~~el~~~y~-~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~ 399 (460)
T cd03788 324 EELVGRINGKFGTLDWTPVRYLY---RSLPREELAALYR-AADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGA 399 (460)
T ss_pred HHHHHHHHhccCCCCceeEEEEe---CCCCHHHHHHHHH-hccEEEeCccccccCcccceeEEEecCCCceEEEeccccc
Confidence 7776664321 2355553 1677899999999 599999999999999999999999999 999998888
Q ss_pred ccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcch
Q 003985 701 AEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSS 758 (781)
Q Consensus 701 ~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~ 758 (781)
.+. +.+|++++|+|++++|++|.++++ .+++.++.+++++++.+ .+|||+.
T Consensus 400 ~~~---~~~g~lv~p~d~~~la~ai~~~l~---~~~~e~~~~~~~~~~~v-~~~~~~~ 450 (460)
T cd03788 400 AEE---LSGALLVNPYDIDEVADAIHRALT---MPLEERRERHRKLREYV-RTHDVQA 450 (460)
T ss_pred hhh---cCCCEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHH
Confidence 877 468999999999999999998873 45688899999999998 6799854
No 71
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.94 E-value=3.1e-24 Score=235.42 Aligned_cols=313 Identities=14% Similarity=0.122 Sum_probs=218.0
Q ss_pred cccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccc
Q 003985 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWI 380 (781)
Q Consensus 301 ~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvP~~~~~~~~~~~i 380 (781)
+||.+.++. +|++.|.++||+|+ |+|...... .+.. ...++++.++|+....+
T Consensus 9 ~gG~~~~~~--------~la~~l~~~G~ev~----v~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~------ 61 (350)
T cd03785 9 TGGHIFPAL--------ALAEELRERGAEVL----FLGTKRGLE--------ARLV-PKAGIPLHTIPVGGLRR------ 61 (350)
T ss_pred chhhhhHHH--------HHHHHHHhCCCEEE----EEECCCcch--------hhcc-cccCCceEEEEecCcCC------
Confidence 578888777 77888899999999 888753211 0111 11257788887753211
Q ss_pred cccCchhhHH------HHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhh
Q 003985 381 SRFDVWPYLE------TFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKK 454 (781)
Q Consensus 381 sr~~i~~yl~------~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~ 454 (781)
...+..+. .....+.+.+. +.+||+||+|....++.+.++++..++|+++..|+..+ .
T Consensus 62 --~~~~~~~~~~~~~~~~~~~~~~~i~---~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~----------~- 125 (350)
T cd03785 62 --KGSLKKLKAPFKLLKGVLQARKILK---KFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVP----------G- 125 (350)
T ss_pred --CChHHHHHHHHHHHHHHHHHHHHHH---hcCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCc----------c-
Confidence 11111111 11112233333 34899999998777777888889999999876553211 0
Q ss_pred hhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCC
Q 003985 455 FDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYF 534 (781)
Q Consensus 455 ~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~ 534 (781)
....+.+..+|.|++.|+...+. ....++.+++||+|.+.+.
T Consensus 126 -----------~~~~~~~~~~~~vi~~s~~~~~~---------------------------~~~~~~~~i~n~v~~~~~~ 167 (350)
T cd03785 126 -----------LANRLLARFADRVALSFPETAKY---------------------------FPKDKAVVTGNPVREEILA 167 (350)
T ss_pred -----------HHHHHHHHhhCEEEEcchhhhhc---------------------------CCCCcEEEECCCCchHHhh
Confidence 01234566799999999876430 1156899999999987665
Q ss_pred CCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHH-HHHHHHHhhccCCCeEE-EEEeCc
Q 003985 535 PYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTG-LVECYGKNSQLRELVNL-VVVAGY 612 (781)
Q Consensus 535 p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~-LieA~~~l~~~~~~~~L-vIVG~g 612 (781)
+... + +.+++ ++++++|+++|+....|+... +++++..+.+ +++.+ +++|.+
T Consensus 168 ~~~~---~-------------------~~~~~--~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~--~~~~~~~i~G~g 221 (350)
T cd03785 168 LDRE---R-------------------ARLGL--RPGKPTLLVFGGSQGARAINEAVPEALAELLR--KRLQVIHQTGKG 221 (350)
T ss_pred hhhh---H-------------------HhcCC--CCCCeEEEEECCcHhHHHHHHHHHHHHHHhhc--cCeEEEEEcCCc
Confidence 4321 1 23455 566778888887777777765 4588888763 45664 467776
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcE
Q 003985 613 IDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPT 692 (781)
Q Consensus 613 ~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPV 692 (781)
. .+++++.++++ .++|+|.|++ .++..+|+. +|++|.+|- +++++|||++|+||
T Consensus 222 -~------------~~~l~~~~~~~--~~~v~~~g~~------~~~~~~l~~-ad~~v~~sg----~~t~~Eam~~G~Pv 275 (350)
T cd03785 222 -D------------LEEVKKAYEEL--GVNYEVFPFI------DDMAAAYAA-ADLVISRAG----ASTVAELAALGLPA 275 (350)
T ss_pred -c------------HHHHHHHHhcc--CCCeEEeehh------hhHHHHHHh-cCEEEECCC----HhHHHHHHHhCCCE
Confidence 4 45667777766 4789999954 467888885 999998762 68999999999999
Q ss_pred EEcCccc--------cccccccCCeEEEECCC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 003985 693 FATCHGG--------PAEIIEHGASGFHIDPY--HPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (781)
Q Consensus 693 IaT~~GG--------~~EiI~dg~~G~lv~p~--d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v 750 (781)
|+++.++ ..+.+.++++|+++++. |+++++++|.+++ .|++.+++|++++++++
T Consensus 276 v~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~ 339 (350)
T cd03785 276 ILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELL----SDPERLKAMAEAARSLA 339 (350)
T ss_pred EEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHhcC
Confidence 9987654 35677778899999987 8999999998887 79999999999998876
No 72
>PHA01633 putative glycosyl transferase group 1
Probab=99.93 E-value=1.1e-24 Score=237.60 Aligned_cols=224 Identities=12% Similarity=0.123 Sum_probs=164.6
Q ss_pred HHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcch
Q 003985 471 AMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSI 550 (781)
Q Consensus 471 a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i 550 (781)
.|.+.+.+|++|...++.+.+ .|+. . .+ +|+||+|.+.|.|........+
T Consensus 89 ~m~~~~~vIavS~~t~~~L~~--------------------~G~~--~-~i-~I~~GVD~~~f~p~~~~~~~~r------ 138 (335)
T PHA01633 89 YLLQDVKFIPNSKFSAENLQE--------------------VGLQ--V-DL-PVFHGINFKIVENAEKLVPQLK------ 138 (335)
T ss_pred HHhcCCEEEeCCHHHHHHHHH--------------------hCCC--C-ce-eeeCCCChhhcCccchhhHHHH------
Confidence 566778899999877653221 2343 2 23 4789999999887542211111
Q ss_pred hhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHHHHH
Q 003985 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAE 626 (781)
Q Consensus 551 ~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----~~LvIVG~g~~~~~~~d~ee~~~ 626 (781)
++++.. .++.++|+++||+.+.||++.|++|++++.+..++ ++|+++|++
T Consensus 139 -----------~~~~~~-~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~-------------- 192 (335)
T PHA01633 139 -----------QKLDKD-FPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK-------------- 192 (335)
T ss_pred -----------HHhCcC-CCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH--------------
Confidence 123321 13567899999999999999999999999876654 578887732
Q ss_pred HHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003985 627 IEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (781)
Q Consensus 627 ~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~d 706 (781)
..+++++.++|+|+|... .++.+++.++|+. +|+||+||.+|+||++++|||+||+|||+|+.||..|++.+
T Consensus 193 ------~~~~l~l~~~V~f~g~~G-~~~~~dl~~~y~~-aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~ 264 (335)
T PHA01633 193 ------QFTQLEVPANVHFVAEFG-HNSREYIFAFYGA-MDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSW 264 (335)
T ss_pred ------HHHHcCCCCcEEEEecCC-CCCHHHHHHHHHh-CCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCC
Confidence 124567888999996322 4567899999995 99999999999999999999999999999999999997542
Q ss_pred ------------------CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchH
Q 003985 707 ------------------GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSP 766 (781)
Q Consensus 707 ------------------g~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye 766 (781)
...||.+++.|++++|++|..+++. .+++. .+.++++++ ++|+|++ +.+.|+
T Consensus 265 ~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~--~~~~~---~~~~~~~~a-~~f~~~~--~~~~~~ 334 (335)
T PHA01633 265 QWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFEL--QDREE---RSMKLKELA-KKYDIRN--LYTRFL 334 (335)
T ss_pred ccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhc--cChhh---hhHHHHHHH-HhcCHHH--HHHHhh
Confidence 2358899999999999999987631 34433 366777777 8899954 556554
No 73
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.93 E-value=3.3e-24 Score=235.04 Aligned_cols=305 Identities=15% Similarity=0.147 Sum_probs=204.3
Q ss_pred HHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccccccCchhhH---HHHHH
Q 003985 318 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYL---ETFTE 394 (781)
Q Consensus 318 eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvP~~~~~~~~~~~isr~~i~~yl---~~f~~ 394 (781)
.|+++|.++||+|+ ++|+..... ... ....++++.+++.....+ .+....++.. .....
T Consensus 19 ~La~~L~~~g~eV~----vv~~~~~~~------~~~---~~~~g~~~~~i~~~~~~~-----~~~~~~l~~~~~~~~~~~ 80 (348)
T TIGR01133 19 AVAEELIKRGVEVL----WLGTKRGLE------KRL---VPKAGIEFYFIPVGGLRR-----KGSFRLIKTPLKLLKAVF 80 (348)
T ss_pred HHHHHHHhCCCEEE----EEeCCCcch------hcc---cccCCCceEEEeccCcCC-----CChHHHHHHHHHHHHHHH
Confidence 67888999999999 888632110 000 011257777777654211 0011111111 11222
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhh
Q 003985 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (781)
Q Consensus 395 ~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~ 474 (781)
.+.+.+. +.+||+||+|....++.+.++++..++|+|+..|+... . ..+.+..+.
T Consensus 81 ~l~~~i~---~~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~-----------------~-----~~~~~~~~~ 135 (348)
T TIGR01133 81 QARRILK---KFKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVP-----------------G-----LTNKLLSRF 135 (348)
T ss_pred HHHHHHH---hcCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCc-----------------c-----HHHHHHHHH
Confidence 3333333 34899999998777777888888899999754332110 0 013356678
Q ss_pred CCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhc
Q 003985 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLL 554 (781)
Q Consensus 475 AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l 554 (781)
+|.+++.|+...+ | -+..+|+||+|...+.+....
T Consensus 136 ~d~ii~~~~~~~~--------~----------------------~~~~~i~n~v~~~~~~~~~~~--------------- 170 (348)
T TIGR01133 136 AKKVLISFPGAKD--------H----------------------FEAVLVGNPVRQEIRSLPVPR--------------- 170 (348)
T ss_pred hCeeEECchhHhh--------c----------------------CCceEEcCCcCHHHhcccchh---------------
Confidence 9999999986643 0 133689999987655432110
Q ss_pred cCccccccccCCCCCCCCCEEEEEeeccCCCChHH-HHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHH
Q 003985 555 FDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTG-LVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHEL 633 (781)
Q Consensus 555 ~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~-LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~l 633 (781)
+.+++ ++++++|+++|+....|++.. ++++++++.+. ++++++++++.+ .+.+++.
T Consensus 171 -------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~~~~~~g~~~------------~~~l~~~ 227 (348)
T TIGR01133 171 -------ERFGL--REGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQIVHQTGKND------------LEKVKNV 227 (348)
T ss_pred -------hhcCC--CCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcEEEEECCcch------------HHHHHHH
Confidence 12454 456788999998888888765 55888887653 466655554433 3567777
Q ss_pred HHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc-------ccccccc
Q 003985 634 MKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG-------PAEIIEH 706 (781)
Q Consensus 634 i~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG-------~~EiI~d 706 (781)
++++++.+.+.|.. . ++..+|+ ++|++|.+| + |++++|||++|+|+|+++.+| ..+++.+
T Consensus 228 ~~~~~l~~~v~~~~-------~-~~~~~l~-~ad~~v~~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~ 294 (348)
T TIGR01133 228 YQELGIEAIVTFID-------E-NMAAAYA-AADLVISRA---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED 294 (348)
T ss_pred HhhCCceEEecCcc-------c-CHHHHHH-hCCEEEECC---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH
Confidence 88888765555652 1 4677888 599999875 2 789999999999999997654 2357888
Q ss_pred CCeEEEECCCC--HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 003985 707 GASGFHIDPYH--PDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (781)
Q Consensus 707 g~~G~lv~p~d--~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v 750 (781)
+++|++++++| +++++++|.+++ +||+.+++|++++++++
T Consensus 295 ~~~G~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~ 336 (348)
T TIGR01133 295 LGAGLVIRQKELLPEKLLEALLKLL----LDPANLEAMAEAARKLA 336 (348)
T ss_pred CCCEEEEecccCCHHHHHHHHHHHH----cCHHHHHHHHHHHHhcC
Confidence 99999999886 999999998877 89999999999998766
No 74
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.93 E-value=5e-24 Score=242.70 Aligned_cols=319 Identities=16% Similarity=0.132 Sum_probs=214.5
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHh
Q 003985 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (781)
Q Consensus 395 ~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~ 473 (781)
.++..+.+.. ..-|+|..|...-.+++.++.++. ..++.+..|..++. ++++. .+.....-+..|-
T Consensus 116 ~fA~~i~~~~-~~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipfP~----~e~f~--------~lp~r~~il~gll 182 (456)
T TIGR02400 116 LFAEALAPLL-QPGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPS----SEIYR--------TLPWRRELLEGLL 182 (456)
T ss_pred HHHHHHHHhC-CCCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCCCC----hHHHh--------hCCcHHHHHHHHh
Confidence 3444444443 245899999999888888887775 46788899965442 22221 1112223456788
Q ss_pred hCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHH---HHHhhhhcch
Q 003985 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ---KRLTALHGSI 550 (781)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~---~rl~~~~~~i 550 (781)
.||.|...|+..+..+.....+.... ...++-. ...| . ..++.++|||+|.+.|.+..... .+...+
T Consensus 183 ~~dligF~t~~~~~~Fl~~~~~~l~~--~~~~~~~-~~~g-~--~~~v~viP~GID~~~f~~~~~~~~~~~~~~~l---- 252 (456)
T TIGR02400 183 AYDLVGFQTYDDARNFLSAVSRELGL--ETLPNGV-ESGG-R--TVRVGAFPIGIDVDRFAEQAKKPSVQKRIAEL---- 252 (456)
T ss_pred cCCEEEECCHHHHHHHHHHHHHHhCC--cccCCce-EECC-c--EEEEEEecCcCCHHHHHHHhcChhHHHHHHHH----
Confidence 99999999998876544433221100 0001000 0111 1 34788999999999886643221 111110
Q ss_pred hhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHHHHH
Q 003985 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAE 626 (781)
Q Consensus 551 ~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----~~LvIVG~g~~~~~~~d~ee~~~ 626 (781)
++.+ +++++|+++||+++.||+..+++|++++.+.+|+ +.|+++|+... ...+++...
T Consensus 253 ----------r~~~-----~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~r---g~~~~~~~l 314 (456)
T TIGR02400 253 ----------RESL-----KGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSR---GDVPEYQQL 314 (456)
T ss_pred ----------HHHc-----CCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCc---cCchHHHHH
Confidence 1111 3578999999999999999999999998777665 56888864321 111222333
Q ss_pred HHHHHHHHHHcC-CCCc-----EEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCc----EEEcC
Q 003985 627 IEKMHELMKTYK-LDGQ-----FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFATC 696 (781)
Q Consensus 627 ~~~l~~li~el~-L~~~-----V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP----VIaT~ 696 (781)
.+.+++++.+.+ ..+. |.+++ ..++.+++..+|+ ++|+||+||..||||++++||||||+| +|+|+
T Consensus 315 ~~~i~~lv~~in~~~~~~~~~pv~~l~---~~~~~~el~aly~-aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~ 390 (456)
T TIGR02400 315 RRQVEELVGRINGRFGTLDWTPIRYLN---RSYDREELMALYR-AADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSE 390 (456)
T ss_pred HHHHHHHHHHHHhccCCCCCccEEEEc---CCCCHHHHHHHHH-hCcEEEECccccccCccHHHHHHhcCCCCceEEEeC
Confidence 344444443221 1111 45544 2677899999999 599999999999999999999999999 99999
Q ss_pred ccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHH
Q 003985 697 HGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPF 767 (781)
Q Consensus 697 ~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ 767 (781)
.+|..+.+. +|++++|.|++++|++|.++++ .+++.++++.+++++++ .+||+. .+++.|..
T Consensus 391 ~~G~~~~l~---~gllVnP~d~~~lA~aI~~aL~---~~~~er~~r~~~~~~~v-~~~~~~--~W~~~~l~ 452 (456)
T TIGR02400 391 FAGAAQELN---GALLVNPYDIDGMADAIARALT---MPLEEREERHRAMMDKL-RKNDVQ--RWREDFLS 452 (456)
T ss_pred CCCChHHhC---CcEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHH--HHHHHHHH
Confidence 999888873 7999999999999999998873 57889999999999998 568884 45555544
No 75
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.92 E-value=2.5e-23 Score=235.53 Aligned_cols=272 Identities=14% Similarity=0.138 Sum_probs=186.6
Q ss_pred CceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHH
Q 003985 407 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 486 (781)
Q Consensus 407 ~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~ 486 (781)
+||+||++..+........+++.|+|++++-|.+... +...|+.+ . ......++.+|.|++.|....
T Consensus 124 ~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~----s~~~~~~~-------~--~~~r~~~~~~d~ii~~S~~~~ 190 (425)
T PRK05749 124 RPKLVIIMETELWPNLIAELKRRGIPLVLANARLSER----SFKRYQKF-------K--RFYRLLFKNIDLVLAQSEEDA 190 (425)
T ss_pred CCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChh----hHHHHHHH-------H--HHHHHHHHhCCEEEECCHHHH
Confidence 8999998865542223345677899999876644221 11111111 1 123457889999999999876
Q ss_pred hhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCC
Q 003985 487 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGT 566 (781)
Q Consensus 487 ~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~ 566 (781)
+...+ .|++ .. +.+++|+ +.+.+.+....... .. .++.++
T Consensus 191 ~~l~~--------------------~g~~--~~-i~vi~n~-~~d~~~~~~~~~~~-~~--------------~r~~~~- 230 (425)
T PRK05749 191 ERFLA--------------------LGAK--NE-VTVTGNL-KFDIEVPPELAARA-AT--------------LRRQLA- 230 (425)
T ss_pred HHHHH--------------------cCCC--CC-cEecccc-cccCCCChhhHHHH-HH--------------HHHHhc-
Confidence 52211 1332 44 7788874 33333222111110 00 012233
Q ss_pred CCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003985 567 LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (781)
Q Consensus 567 l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~fl 646 (781)
+++++++++|+. .|+.+.+++|+.++.+..|+++|+|+|+|+. ..++++++++++|+. .+.|.
T Consensus 231 ---~~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~-----------r~~~l~~~~~~~gl~-~~~~~ 293 (425)
T PRK05749 231 ---PNRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPE-----------RFKEVEELLKKAGLS-YVRRS 293 (425)
T ss_pred ---CCCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChh-----------hHHHHHHHHHhCCCc-EEEcc
Confidence 356788888764 6889999999999887789999999999875 125788889999885 35555
Q ss_pred ccccCc--------CChHHHHHHHHccCcEEE-EcCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccC-CeEEEECC
Q 003985 647 AAQTNR--------ARNGELYRYIADTKGAFV-QPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHG-ASGFHIDP 715 (781)
Q Consensus 647 G~~~~~--------v~~~el~~~la~aadvfV-~PS~~E~fGltvlEAMa~GlPVIaT~~-GG~~EiI~dg-~~G~lv~p 715 (781)
|..... -..+++..+|+. +|+++ .||..|++|.+++|||+||+|||++.. ++..|+++.. .+|+++++
T Consensus 294 ~~~~~~~~~~v~l~~~~~el~~~y~~-aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~ 372 (425)
T PRK05749 294 QGEPPSADTDVLLGDTMGELGLLYAI-ADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQV 372 (425)
T ss_pred CCCCCCCCCcEEEEecHHHHHHHHHh-CCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEE
Confidence 421100 024689999994 99954 478889999999999999999999854 6677766553 46888889
Q ss_pred CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHh
Q 003985 716 YHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYER 753 (781)
Q Consensus 716 ~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ 753 (781)
+|+++++++|.+++ +||+.+++|+++|++.+.++
T Consensus 373 ~d~~~La~~l~~ll----~~~~~~~~m~~~a~~~~~~~ 406 (425)
T PRK05749 373 EDAEDLAKAVTYLL----TDPDARQAYGEAGVAFLKQN 406 (425)
T ss_pred CCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHhC
Confidence 99999999998887 89999999999999999664
No 76
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.90 E-value=2.1e-23 Score=205.78 Aligned_cols=160 Identities=28% Similarity=0.482 Sum_probs=144.1
Q ss_pred CCCCCEEEEEeeccCCCChHHHHHHHHHhhcc-CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003985 569 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQL-RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (781)
Q Consensus 569 ~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~-~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG 647 (781)
+.++++|+++||+++.||++.+++++..+.+. .+++.|+|+|.+.. ...+...++.+++.++|+|+|
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~i~~~~ 79 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEY------------KKELKNLIEKLNLKENIIFLG 79 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCH------------HHHHHHHHHHTTCGTTEEEEE
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccc------------ccccccccccccccccccccc
Confidence 57788999999999999999999999999764 68899999996644 677889999999999999999
Q ss_pred cccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHH
Q 003985 648 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMAD 727 (781)
Q Consensus 648 ~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~ 727 (781)
..+..++..++.. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|+++++.|+++++++|.+
T Consensus 80 ----~~~~~~l~~~~~~-~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~ 154 (172)
T PF00534_consen 80 ----YVPDDELDELYKS-SDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIEK 154 (172)
T ss_dssp ----SHSHHHHHHHHHH-TSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHHH
T ss_pred ----ccccccccccccc-ceeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHHH
Confidence 5557799999995 99999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHhccCCHHHHHHHHHHHHHH
Q 003985 728 FFGKCKENPSHWKKISDGGLKR 749 (781)
Q Consensus 728 ~l~~l~~dp~~~~~~s~~a~~~ 749 (781)
++ .+++.++.|+++|++|
T Consensus 155 ~l----~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 155 LL----NDPELRQKLGKNARER 172 (172)
T ss_dssp HH----HHHHHHHHHHHHHHHH
T ss_pred HH----CCHHHHHHHHHHhcCC
Confidence 88 7899999999999875
No 77
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.89 E-value=6.2e-22 Score=238.59 Aligned_cols=321 Identities=13% Similarity=0.116 Sum_probs=212.5
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHh
Q 003985 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (781)
Q Consensus 395 ~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~ 473 (781)
.+...+.+... .-|+|-.|.+.-.+++..+.++. ..++.+..|..++.. .++. -+.+-..-+..|-
T Consensus 136 ~FA~~i~~~~~-~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs~----e~fr--------~lp~r~~il~gll 202 (797)
T PLN03063 136 MFLDVVKENYE-EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSS----EIYK--------TLPSRSELLRAVL 202 (797)
T ss_pred HHHHHHHHhcC-CCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCCH----HHHh--------hCCCHHHHHHHHh
Confidence 34444444432 34899999999888887777764 688889999765532 2111 1111223445788
Q ss_pred hCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHH---HHHHhhhhcch
Q 003985 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK---QKRLTALHGSI 550 (781)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~---~~rl~~~~~~i 550 (781)
.||.|-+.|+..+..+-+........ ..+..++ ...|- ..++.++|||||.+.|.+.... ..+...+
T Consensus 203 ~aDligF~t~~y~r~Fl~~~~r~l~~-~~~~~~i--~~~gr---~~~I~viP~GID~~~f~~~~~~~~~~~~~~~l---- 272 (797)
T PLN03063 203 TADLIGFHTYDFARHFLSACTRILGV-EGTHEGV--VDQGK---VTRVAVFPIGIDPERFINTCELPEVKQHMKEL---- 272 (797)
T ss_pred cCCEEEeCCHHHHHHHHHHHHHHhCc-cccCCce--EECCe---EEEEEEEecccCHHHHHHHhcChhHHHHHHHH----
Confidence 89999999987765433321111000 0000110 01111 3478899999999887653221 1111110
Q ss_pred hhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCe----EEEEEeCcCCCCCCcchHHHHH
Q 003985 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELV----NLVVVAGYIDVNKSKDREEIAE 626 (781)
Q Consensus 551 ~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~----~LvIVG~g~~~~~~~d~ee~~~ 626 (781)
++. ..++++|+++||+++.||+..+++||+++.+.+|++ .|+++++... +..+ +
T Consensus 273 ----------r~~-----~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr---~~~~----~ 330 (797)
T PLN03063 273 ----------KRF-----FAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTR---NDVP----E 330 (797)
T ss_pred ----------HHh-----cCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCC---CchH----H
Confidence 011 135789999999999999999999999998877765 3554543211 1112 2
Q ss_pred HHHHHHHHHHcC--CC---CcEEEecc--ccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCc----EEEc
Q 003985 627 IEKMHELMKTYK--LD---GQFRWIAA--QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFAT 695 (781)
Q Consensus 627 ~~~l~~li~el~--L~---~~V~flG~--~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP----VIaT 695 (781)
.+++++.++++. +. +.+.|.+. ....++.+++..+|+ +||+||+||.+||||++++||||||+| +|+|
T Consensus 331 y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~-~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlS 409 (797)
T PLN03063 331 YQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYA-ITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLS 409 (797)
T ss_pred HHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHH-hCCEEEeCccccccCcchhhHheeecCCCCCEEee
Confidence 344445554442 22 22333331 113678899999999 599999999999999999999999999 9999
Q ss_pred CccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003985 696 CHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 696 ~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll 769 (781)
..+|..+.+ +.+|++++|.|++++|++|.++++ .+++.+++..+.+++++ .++||.. +++.+.+.+
T Consensus 410 e~~G~~~~l--~~~allVnP~D~~~lA~AI~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~--Wa~~fl~~l 475 (797)
T PLN03063 410 EFAGAGQSL--GAGALLVNPWNITEVSSAIKEALN---MSDEERETRHRHNFQYV-KTHSAQK--WADDFMSEL 475 (797)
T ss_pred CCcCchhhh--cCCeEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHHhh-hhCCHHH--HHHHHHHHH
Confidence 999999976 567999999999999999998883 48889999999999988 7789854 445444444
No 78
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.88 E-value=2.2e-21 Score=216.33 Aligned_cols=261 Identities=12% Similarity=0.077 Sum_probs=173.6
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHH
Q 003985 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (781)
Q Consensus 406 ~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (781)
.+||+||++++..++.....++..++|++++.++....+ .++.+.+|.++++|+..
T Consensus 103 ~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~~------------------------~~~~~~ad~i~~~s~~~ 158 (380)
T PRK13609 103 EKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLHK------------------------IWVHREVDRYFVATDHV 158 (380)
T ss_pred hCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCCc------------------------ccccCCCCEEEECCHHH
Confidence 489999998776654444444456799886665432110 12456899999999876
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccC
Q 003985 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (781)
Q Consensus 486 ~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g 565 (781)
.+.+. ..|++ ..|+.++.+.++.....+..... . +.++|
T Consensus 159 ~~~l~--------------------~~gi~--~~ki~v~G~p~~~~f~~~~~~~~--~-----------------~~~~~ 197 (380)
T PRK13609 159 KKVLV--------------------DIGVP--PEQVVETGIPIRSSFELKINPDI--I-----------------YNKYQ 197 (380)
T ss_pred HHHHH--------------------HcCCC--hhHEEEECcccChHHcCcCCHHH--H-----------------HHHcC
Confidence 54211 12443 66888876655432211111111 1 13366
Q ss_pred CCCCCCCCE-EEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003985 566 TLSDRSKPI-VFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (781)
Q Consensus 566 ~l~~~~k~i-Il~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~ 644 (781)
+ ++++++ +++.|++...||+..+++++.+. ++++++++|++.. ...+++++++++++ ++|+
T Consensus 198 l--~~~~~~il~~~G~~~~~k~~~~li~~l~~~----~~~~~viv~G~~~----------~~~~~l~~~~~~~~--~~v~ 259 (380)
T PRK13609 198 L--CPNKKILLIMAGAHGVLGNVKELCQSLMSV----PDLQVVVVCGKNE----------ALKQSLEDLQETNP--DALK 259 (380)
T ss_pred C--CCCCcEEEEEcCCCCCCcCHHHHHHHHhhC----CCcEEEEEeCCCH----------HHHHHHHHHHhcCC--CcEE
Confidence 6 445554 55668898899999999987642 5789988876422 23556777776654 6899
Q ss_pred EeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-cccc----ccccccCCeEEEECCCCHH
Q 003985 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGGP----AEIIEHGASGFHIDPYHPD 719 (781)
Q Consensus 645 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~-~GG~----~EiI~dg~~G~lv~p~d~e 719 (781)
|+|++. ++..+++ ++|++|. ++.|++++|||+||+|||+++ .+|. .+.+.+ +|+.+.+.|++
T Consensus 260 ~~g~~~------~~~~l~~-~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~~~~~~~ 326 (380)
T PRK13609 260 VFGYVE------NIDELFR-VTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAVVIRDDE 326 (380)
T ss_pred EEechh------hHHHHHH-hccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEEEECCHH
Confidence 999643 4677888 5999885 466999999999999999986 5553 223432 35555567999
Q ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003985 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 720 ~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll 769 (781)
+++++|.+++ .|++.+++|++++++.. +.++++ .+++.+.+++
T Consensus 327 ~l~~~i~~ll----~~~~~~~~m~~~~~~~~-~~~s~~--~i~~~i~~~~ 369 (380)
T PRK13609 327 EVFAKTEALL----QDDMKLLQMKEAMKSLY-LPEPAD--HIVDDILAEN 369 (380)
T ss_pred HHHHHHHHHH----CCHHHHHHHHHHHHHhC-CCchHH--HHHHHHHHhh
Confidence 9999998887 89999999999987755 556664 4555555554
No 79
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.88 E-value=3e-20 Score=207.17 Aligned_cols=264 Identities=11% Similarity=0.025 Sum_probs=170.7
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHH
Q 003985 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (781)
Q Consensus 405 ~~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (781)
+.+.+|++.+.+....+ ++...+.++|+.+++.......... .. ...+..+++.||.|+|+|..
T Consensus 100 ~~~~~i~~~~~P~~~~~---~~~~~~~~~Vyd~~D~~~~~~~~~~----~~---------~~~e~~~~~~ad~vi~~S~~ 163 (373)
T cd04950 100 GFGRPILWYYTPYTLPV---AALLQASLVVYDCVDDLSAFPGGPP----EL---------LEAERRLLKRADLVFTTSPS 163 (373)
T ss_pred CCCCcEEEEeCccHHHH---HhhcCCCeEEEEcccchhccCCCCH----HH---------HHHHHHHHHhCCEEEECCHH
Confidence 45566666655444333 3335678899888875432211000 00 03466789999999999987
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccccc
Q 003985 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (781)
Q Consensus 485 ~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~ 564 (781)
..+..+ . ..+++.+||||+|.+.|.+......... .
T Consensus 164 l~~~~~----------------------~---~~~~i~~i~ngvd~~~f~~~~~~~~~~~-----------------~-- 199 (373)
T cd04950 164 LYEAKR----------------------R---LNPNVVLVPNGVDYEHFAAARDPPPPPA-----------------D-- 199 (373)
T ss_pred HHHHHh----------------------h---CCCCEEEcccccCHHHhhcccccCCChh-----------------H--
Confidence 654211 0 1368999999999988866432110000 0
Q ss_pred CCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003985 565 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (781)
Q Consensus 565 g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~ 644 (781)
....++++|+|+|++++.++++.+.++++ ..|+++|+|+|++... .... ++...++|+
T Consensus 200 --~~~~~~~~i~y~G~l~~~~d~~ll~~la~----~~p~~~~vliG~~~~~------------~~~~----~~~~~~nV~ 257 (373)
T cd04950 200 --LAALPRPVIGYYGAIAEWLDLELLEALAK----ARPDWSFVLIGPVDVS------------IDPS----ALLRLPNVH 257 (373)
T ss_pred --HhcCCCCEEEEEeccccccCHHHHHHHHH----HCCCCEEEEECCCcCc------------cChh----HhccCCCEE
Confidence 01346789999999999888766555443 3478999999998320 0011 111246899
Q ss_pred EeccccCcCChHHHHHHHHccCcEEEEcCCC-----CCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHH
Q 003985 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFY-----EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPD 719 (781)
Q Consensus 645 flG~~~~~v~~~el~~~la~aadvfV~PS~~-----E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e 719 (781)
|+| .++.+++..+++. +|++++|+.. +++|++++||||||+|||+|+.++. +..+..+++ .++|++
T Consensus 258 ~~G----~~~~~~l~~~l~~-~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~---~~~~~~~~~-~~~d~~ 328 (373)
T cd04950 258 YLG----PKPYKELPAYLAG-FDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEV---RRYEDEVVL-IADDPE 328 (373)
T ss_pred EeC----CCCHHHHHHHHHh-CCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHH---HhhcCcEEE-eCCCHH
Confidence 999 6778999999995 9999999853 4689999999999999999986544 444443444 456999
Q ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHH
Q 003985 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFV 768 (781)
Q Consensus 720 ~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~l 768 (781)
+++++|.+++. .+.....+ .+.+ +.+.|||++. ++.+.+.
T Consensus 329 ~~~~ai~~~l~---~~~~~~~~---~~~~-~~~~~sW~~~--a~~~~~~ 368 (373)
T cd04950 329 EFVAAIEKALL---EDGPARER---RRLR-LAAQNSWDAR--AAEMLEA 368 (373)
T ss_pred HHHHHHHHHHh---cCCchHHH---HHHH-HHHHCCHHHH--HHHHHHH
Confidence 99999988652 22222111 2222 5588999764 3444433
No 80
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.87 E-value=2.2e-20 Score=188.90 Aligned_cols=121 Identities=31% Similarity=0.519 Sum_probs=103.1
Q ss_pred EEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChH
Q 003985 577 SMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNG 656 (781)
Q Consensus 577 ~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~ 656 (781)
++|++.+.||++.+++++..+.+..++++++++|++.+ .......+.+++..++|.++|. ++..
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~~~----~~~~ 172 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPE------------REYLEELLAALLLLDRVIFLGG----LDPE 172 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCC------------hHHHHHHHHhcCCcccEEEeCC----CCcH
Confidence 99999999999999999999988888999999999976 3344444667788899999994 3233
Q ss_pred HHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEE
Q 003985 657 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHI 713 (781)
Q Consensus 657 el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv 713 (781)
+....+.+.+|+++.|+..|++|++++|||+||+|||+|+.++..|++.++.+|+++
T Consensus 173 ~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 173 ELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 444444435999999999999999999999999999999999999999999999874
No 81
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.87 E-value=9.2e-21 Score=228.18 Aligned_cols=321 Identities=15% Similarity=0.099 Sum_probs=211.3
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHh
Q 003985 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (781)
Q Consensus 395 ~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~ 473 (781)
.++..+.+..+ .-|+|..|.+.-.+++..+.++. ..++.+..|..++.. .+... +.....-...|-
T Consensus 122 ~fA~~~~~~~~-~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP~~----~~f~~--------lp~~~~ll~~ll 188 (726)
T PRK14501 122 RFAEAIAAIAR-PGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPSF----EVFRL--------LPWREEILEGLL 188 (726)
T ss_pred HHHHHHHHhcC-CCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCCCh----HHHhh--------CCChHHHHHHHh
Confidence 34444444432 34899999999888888887664 578888999765532 22221 111123445788
Q ss_pred hCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHH---HHHhhhhcch
Q 003985 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ---KRLTALHGSI 550 (781)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~---~rl~~~~~~i 550 (781)
.+|.|-..|......+.+........ .+-.+ .....|- ..++.++|||+|.+.|.+..... .+...++
T Consensus 189 ~~Dligf~t~~~~r~Fl~~~~~~l~~--~~~~~-~~~~~gr---~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr--- 259 (726)
T PRK14501 189 GADLIGFHTYDYVRHFLSSVLRVLGY--ETELG-EIRLGGR---IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLR--- 259 (726)
T ss_pred cCCeEEeCCHHHHHHHHHHHHHHcCC--ccCCC-eEEECCE---EEEEEEEECeEcHHHHHHHhcCchHHHHHHHHH---
Confidence 89999999887655433322211100 00000 1111121 23688999999999887643211 1111100
Q ss_pred hhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHHHHH
Q 003985 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAE 626 (781)
Q Consensus 551 ~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----~~LvIVG~g~~~~~~~d~ee~~~ 626 (781)
+. .+++++|+++||+++.||+..+++||+++.+.+|+ ++|++||.+.. ..-++..+.
T Consensus 260 -----------~~-----~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr---~~~~~~~~l 320 (726)
T PRK14501 260 -----------QD-----LRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSR---TGVPQYQEM 320 (726)
T ss_pred -----------HH-----cCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC---cchHHHHHH
Confidence 00 24677999999999999999999999998877775 78999985422 001233344
Q ss_pred HHHHHHHHHHcC-C------CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHc-----CCcEEE
Q 003985 627 IEKMHELMKTYK-L------DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTC-----GLPTFA 694 (781)
Q Consensus 627 ~~~l~~li~el~-L------~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~-----GlPVIa 694 (781)
.+.+.+++.+.+ . .+-+.|.| .++.+++..+|+ ++|+||+||..||||++++|||+| |.||++
T Consensus 321 ~~~~~~~v~~in~~~~~~~~~pv~~~~~----~~~~~~l~~ly~-~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls 395 (726)
T PRK14501 321 KREIDELVGRINGEFGTVDWTPIHYFYR----SLPFEELVALYR-AADVALVTPLRDGMNLVAKEYVASRTDGDGVLILS 395 (726)
T ss_pred HHHHHHHHHHHHhhcCCCCcceEEEEeC----CCCHHHHHHHHH-hccEEEecccccccCcccceEEEEcCCCCceEEEe
Confidence 555556655432 1 12234555 678899999999 599999999999999999999999 557777
Q ss_pred cCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHh
Q 003985 695 TCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINV 771 (781)
Q Consensus 695 T~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll~~ 771 (781)
+..|+..+++ .|++++|+|++++|++|.+++. .+++.+.+..+++++++ .+|||+. +++.|.+.+..
T Consensus 396 ~~~G~~~~l~----~~llv~P~d~~~la~ai~~~l~---~~~~e~~~r~~~~~~~v-~~~~~~~--w~~~~l~~l~~ 462 (726)
T PRK14501 396 EMAGAAAELA----EALLVNPNDIEGIAAAIKRALE---MPEEEQRERMQAMQERL-RRYDVHK--WASDFLDELRE 462 (726)
T ss_pred cccchhHHhC----cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHH--HHHHHHHHHHH
Confidence 7788888875 4899999999999999998872 33455556667788888 6899965 45555555543
No 82
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.86 E-value=5.5e-20 Score=205.72 Aligned_cols=247 Identities=14% Similarity=0.159 Sum_probs=169.8
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHH-----cCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEE
Q 003985 406 GFPDFIIGNYSDG-NLVASLLAYK-----MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFII 479 (781)
Q Consensus 406 ~~pDIIh~~~~~~-~lva~llar~-----~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~II 479 (781)
.+||+||++++.. ...+..+++. .++|++++++++.... . .+..+.+|.++
T Consensus 99 ~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~--------------~---------~w~~~~~d~~~ 155 (382)
T PLN02605 99 YKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH--------------P---------TWFHKGVTRCF 155 (382)
T ss_pred cCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC--------------c---------ccccCCCCEEE
Confidence 4899999976553 2222333322 4789888876542100 0 12356899999
Q ss_pred ecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccc
Q 003985 480 TSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQ 559 (781)
Q Consensus 480 t~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~ 559 (781)
++|....+.+. ..|++ .+|+.++++++|.+.+.+...... .
T Consensus 156 ~~s~~~~~~l~--------------------~~g~~--~~ki~v~g~~v~~~f~~~~~~~~~-~---------------- 196 (382)
T PLN02605 156 CPSEEVAKRAL--------------------KRGLE--PSQIRVYGLPIRPSFARAVRPKDE-L---------------- 196 (382)
T ss_pred ECCHHHHHHHH--------------------HcCCC--HHHEEEECcccCHhhccCCCCHHH-H----------------
Confidence 99987654211 12444 679999999998765443322211 1
Q ss_pred cccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh----ccCCCeE-EEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003985 560 NDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS----QLRELVN-LVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (781)
Q Consensus 560 ~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~----~~~~~~~-LvIVG~g~~~~~~~d~ee~~~~~~l~~li 634 (781)
++.+|+ ++++++|+++|+....|++..+++++.... ...++.+ ++++|.+.. ..+.+++.
T Consensus 197 -r~~~gl--~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~-----------~~~~L~~~- 261 (382)
T PLN02605 197 -RRELGM--DEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK-----------LQSKLESR- 261 (382)
T ss_pred -HHHcCC--CCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH-----------HHHHHHhh-
Confidence 134777 677899999999999999999999997653 1134565 556665521 12333332
Q ss_pred HHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCc------cccccccccCC
Q 003985 635 KTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH------GGPAEIIEHGA 708 (781)
Q Consensus 635 ~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~------GG~~EiI~dg~ 708 (781)
....+|+|+|+++ ++..+|+ ++|++|.++ .|+|++|||+||+|+|+|+. |+.. .+.+++
T Consensus 262 ---~~~~~v~~~G~~~------~~~~l~~-aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~~-~i~~~g 326 (382)
T PLN02605 262 ---DWKIPVKVRGFVT------NMEEWMG-ACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNVP-YVVDNG 326 (382)
T ss_pred ---cccCCeEEEeccc------cHHHHHH-hCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhHH-HHHhCC
Confidence 2345799999653 5888888 599999865 48999999999999999983 4443 344555
Q ss_pred eEEEECCCCHHHHHHHHHHHHHhccCC-HHHHHHHHHHHHHHH
Q 003985 709 SGFHIDPYHPDQAAELMADFFGKCKEN-PSHWKKISDGGLKRI 750 (781)
Q Consensus 709 ~G~lv~p~d~e~lA~~I~~~l~~l~~d-p~~~~~~s~~a~~~v 750 (781)
.|+.+ .|+++++++|.+++ .| ++.+++|++++++++
T Consensus 327 ~g~~~--~~~~~la~~i~~ll----~~~~~~~~~m~~~~~~~~ 363 (382)
T PLN02605 327 FGAFS--ESPKEIARIVAEWF----GDKSDELEAMSENALKLA 363 (382)
T ss_pred ceeec--CCHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhc
Confidence 67654 79999999998887 66 999999999998877
No 83
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.82 E-value=7e-19 Score=197.54 Aligned_cols=268 Identities=15% Similarity=0.140 Sum_probs=177.7
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHH
Q 003985 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (781)
Q Consensus 406 ~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (781)
.+||+||++.+.+++.....++..++|+++..++..... . +..+.+|.+++.|+..
T Consensus 103 ~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~~------~------------------w~~~~~d~~~v~s~~~ 158 (391)
T PRK13608 103 EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLHK------N------------------WITPYSTRYYVATKET 158 (391)
T ss_pred hCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCccc------c------------------cccCCCCEEEECCHHH
Confidence 499999998665543323223446899865544321100 0 2345799999999877
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccC
Q 003985 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (781)
Q Consensus 486 ~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g 565 (781)
.+.+. ..|++ ..|+.++.++++.....+...... +.++|
T Consensus 159 ~~~l~--------------------~~gi~--~~ki~v~GiPv~~~f~~~~~~~~~-------------------~~~~~ 197 (391)
T PRK13608 159 KQDFI--------------------DVGID--PSTVKVTGIPIDNKFETPIDQKQW-------------------LIDNN 197 (391)
T ss_pred HHHHH--------------------HcCCC--HHHEEEECeecChHhcccccHHHH-------------------HHHcC
Confidence 55211 12444 678888877776433222221111 12356
Q ss_pred CCCCCCCCE-EEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003985 566 TLSDRSKPI-VFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (781)
Q Consensus 566 ~l~~~~k~i-Il~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~ 644 (781)
+ ++++++ +++.|+++..||+..+++++.+ ..+++++++++|+.. +...++.+.++..++|.
T Consensus 198 l--~~~~~~ilv~~G~lg~~k~~~~li~~~~~---~~~~~~~vvv~G~~~-------------~l~~~l~~~~~~~~~v~ 259 (391)
T PRK13608 198 L--DPDKQTILMSAGAFGVSKGFDTMITDILA---KSANAQVVMICGKSK-------------ELKRSLTAKFKSNENVL 259 (391)
T ss_pred C--CCCCCEEEEECCCcccchhHHHHHHHHHh---cCCCceEEEEcCCCH-------------HHHHHHHHHhccCCCeE
Confidence 6 445555 5678999999999999998632 335788877765432 11223333445557899
Q ss_pred EeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-ccc----cccccccCCeEEEECCCCHH
Q 003985 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGG----PAEIIEHGASGFHIDPYHPD 719 (781)
Q Consensus 645 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~-~GG----~~EiI~dg~~G~lv~p~d~e 719 (781)
++|++ +++..+|+ ++|++|. .+.|+|+.|||+||+|+|+++ .+| ....+.+.+.|+.. .|++
T Consensus 260 ~~G~~------~~~~~~~~-~aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~--~~~~ 326 (391)
T PRK13608 260 ILGYT------KHMNEWMA-SSQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIA--DTPE 326 (391)
T ss_pred EEecc------chHHHHHH-hhhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEe--CCHH
Confidence 99964 35788888 5999997 357999999999999999996 333 22234455566654 5999
Q ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHhcCCCC
Q 003985 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINVISMPT 776 (781)
Q Consensus 720 ~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll~~~~~~~ 776 (781)
+++++|.+++ +|++.+++|++++++.. +.|+| ..+++.|.+++..++.++
T Consensus 327 ~l~~~i~~ll----~~~~~~~~m~~~~~~~~-~~~s~--~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 327 EAIKIVASLT----NGNEQLTNMISTMEQDK-IKYAT--QTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred HHHHHHHHHh----cCHHHHHHHHHHHHHhc-CCCCH--HHHHHHHHHHhhhhhhhh
Confidence 9999998877 89999999999999886 56877 457778888876655444
No 84
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.82 E-value=2.5e-18 Score=181.38 Aligned_cols=289 Identities=22% Similarity=0.288 Sum_probs=205.4
Q ss_pred ceEEEEcCCCchH---HHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHH
Q 003985 408 PDFIIGNYSDGNL---VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (781)
Q Consensus 408 pDIIh~~~~~~~l---va~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (781)
+|+++.+...... .........+.+.+...|....................+.+. .......+.++.+++.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 160 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLLK---RLKKALRLLADRVIAVSPA 160 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccchhhHHHHHHHHH---HHHHhccccccEEEECCHH
Confidence 5999987765533 455566667888888888765433211111110000000000 0011112247778888765
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccccc
Q 003985 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (781)
Q Consensus 485 ~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~ 564 (781)
.....+.. .. ..++.++||+++.+.+.+.. .
T Consensus 161 ~~~~~~~~--------------------~~---~~~~~~~~~~~~~~~~~~~~--------------------------~ 191 (381)
T COG0438 161 LKELLEAL--------------------GV---PNKIVVIPNGIDTEKFAPAR--------------------------I 191 (381)
T ss_pred HHHHHHHh--------------------CC---CCCceEecCCcCHHHcCccc--------------------------c
Confidence 42210000 11 23788999999988776530 1
Q ss_pred CCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003985 565 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (781)
Q Consensus 565 g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~ 644 (781)
++.......+++++||+.+.||++.+++++..+.+..++++++++|.+... .+.+..++.+++..++|.
T Consensus 192 ~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~-----------~~~~~~~~~~~~~~~~v~ 260 (381)
T COG0438 192 GLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER-----------REELEKLAKKLGLEDNVK 260 (381)
T ss_pred CCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc-----------HHHHHHHHHHhCCCCcEE
Confidence 121111247899999999999999999999999887667999999999761 345666888888888999
Q ss_pred EeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHH
Q 003985 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAEL 724 (781)
Q Consensus 645 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~ 724 (781)
|+| .++.+++..+++. +|++++||.+|+||++++|||+||+|||+|+.++..|++.++.+|+++++.|.++++++
T Consensus 261 ~~g----~~~~~~~~~~~~~-~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~ 335 (381)
T COG0438 261 FLG----YVPDEELAELLAS-ADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADA 335 (381)
T ss_pred Eec----ccCHHHHHHHHHh-CCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHH
Confidence 999 4556688888884 89999999999999999999999999999999999999998878997777789999999
Q ss_pred HHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003985 725 MADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 725 I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll~ 770 (781)
+..++ ++++.++.+++.+++.+.+.|+|+... +.+.+++.
T Consensus 336 i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 375 (381)
T COG0438 336 LEQLL----EDPELREELGEAARERVEEEFSWERIA--EQLLELYE 375 (381)
T ss_pred HHHHh----cCHHHHHHHHHHHHHHHHHhcCHHHHH--HHHHHHHH
Confidence 98887 677889999987788887899997753 55555543
No 85
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.80 E-value=1.1e-17 Score=190.47 Aligned_cols=304 Identities=11% Similarity=0.044 Sum_probs=209.4
Q ss_pred CceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHH
Q 003985 407 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (781)
Q Consensus 407 ~pDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (781)
.-|+|-.|.....+++..+.++. ..++-+..|..++.. .++. .+..-..-+..|-.||.|=..|+..
T Consensus 132 ~~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPFPs~----eifr--------~LP~r~~ll~glL~aDliGFqt~~y 199 (487)
T TIGR02398 132 EGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPSA----DVFN--------ILPWREQIIGSLLCCDYIGFHIPRY 199 (487)
T ss_pred CCCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCCCCh----HHHh--------hCCchHHHHHHHhcCCeEEeCCHHH
Confidence 45899999999888888887653 467888888765532 2111 1112233445788899999999877
Q ss_pred Hhhcccccccccccccccc----ccc--e-------eeeccCCCCCC--ceEEecCCCcCCCCCCCcH---HHHHHhhhh
Q 003985 486 IAGTKNTVGQYESHTAFTL----PGL--Y-------RVVHGIDVFDP--KFNIVSPGADMDIYFPYSE---KQKRLTALH 547 (781)
Q Consensus 486 ~~~~k~~v~qy~s~~~f~l----p~l--y-------~v~~gi~~f~~--k~~VIpnGvD~~~f~p~~~---~~~rl~~~~ 547 (781)
+..+.+.+.+......-.- ++. + ....++..... ++.++|.|||.+.|.+... ...+...
T Consensus 200 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~-- 277 (487)
T TIGR02398 200 VENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMER-- 277 (487)
T ss_pred HHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHH--
Confidence 6654443322211000000 000 0 00001111122 5778999999998855321 1111111
Q ss_pred cchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHH
Q 003985 548 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREE 623 (781)
Q Consensus 548 ~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----~~LvIVG~g~~~~~~~d~ee 623 (781)
.++++| ++++|++++|++..||+...++||+++.+.+|+ +.|++||.... +..+++
T Consensus 278 ------------lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr---~~v~~y 337 (487)
T TIGR02398 278 ------------IRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAA---SGMTIY 337 (487)
T ss_pred ------------HHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCc---ccchHH
Confidence 112233 578999999999999999999999999887885 79999998754 233455
Q ss_pred HHHHHHHHHHHHHc-------CCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCC----cE
Q 003985 624 IAEIEKMHELMKTY-------KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL----PT 692 (781)
Q Consensus 624 ~~~~~~l~~li~el-------~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl----PV 692 (781)
.+..+++.+++.+. +..+-+.+.+ .++.+++..+|+ .||+++.+|..||++++..|+|+|+. |+
T Consensus 338 ~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~----~v~~~el~alYr-~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvL 412 (487)
T TIGR02398 338 DELQGQIEQAVGRINGRFARIGWTPLQFFTR----SLPYEEVSAWFA-MADVMWITPLRDGLNLVAKEYVAAQGLLDGVL 412 (487)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCccEEEEcC----CCCHHHHHHHHH-hCCEEEECccccccCcchhhHHhhhcCCCCCE
Confidence 66777788877765 3344455666 788999999999 59999999999999999999999998 99
Q ss_pred EEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCc
Q 003985 693 FATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVV 756 (781)
Q Consensus 693 IaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw 756 (781)
|.|..+|.++.+ ..+++++|.|++++|++|.+.++ ..++.+++..+..++.+ .++|.
T Consensus 413 ILSefaGaa~~l---~~AllVNP~d~~~~A~ai~~AL~---m~~~Er~~R~~~l~~~v-~~~d~ 469 (487)
T TIGR02398 413 VLSEFAGAAVEL---KGALLTNPYDPVRMDETIYVALA---MPKAEQQARMREMFDAV-NYYDV 469 (487)
T ss_pred EEeccccchhhc---CCCEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCH
Confidence 999999999776 35899999999999999998884 55566666666667777 44443
No 86
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.78 E-value=2.3e-17 Score=192.84 Aligned_cols=349 Identities=14% Similarity=0.133 Sum_probs=232.0
Q ss_pred HHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH--------------cCCcEEEEecCCccccC---CCChhhHh-
Q 003985 392 FTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK--------------MGITQCTIAHALEKTKY---PDSDIYWK- 453 (781)
Q Consensus 392 f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~--------------~gvp~v~t~H~l~~~k~---~~s~~~~k- 453 (781)
|.....+.+. .+..+||+||+|.+.++++...+.+. ...++++|.|++..... +. +...+
T Consensus 147 l~~a~l~~l~-~l~~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~-~~~~~~ 224 (601)
T TIGR02094 147 LGIGGVRALR-ALGIDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPE-DLMRKY 224 (601)
T ss_pred HHHHHHHHHH-HcCCCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCH-HHHHHH
Confidence 3344444443 34669999999999998777665332 13678999999766542 21 11110
Q ss_pred -------------hhh---cc-ccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCC
Q 003985 454 -------------KFD---EK-YHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 516 (781)
Q Consensus 454 -------------~~~---~~-y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~ 516 (781)
.+. .. +....++..-..++..||.|.++|....+-.++..+.+ +. +...
T Consensus 225 ~~~~~~~~gl~~~~~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l-----------~~---~~~~ 290 (601)
T TIGR02094 225 FGDYAANLGLPREQLLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFL-----------YP---GYEE 290 (601)
T ss_pred hhhhhhHhCCCHHHHHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhh-----------hh---hccc
Confidence 000 00 00002344456788999999999986654222211110 00 0111
Q ss_pred CCCceEEecCCCcCCCCCCCcHHHHH----------------------------HhhhhcchhhhccC------------
Q 003985 517 FDPKFNIVSPGADMDIYFPYSEKQKR----------------------------LTALHGSIEQLLFD------------ 556 (781)
Q Consensus 517 f~~k~~VIpnGvD~~~f~p~~~~~~r----------------------------l~~~~~~i~~~l~~------------ 556 (781)
...++.=|.||||...+.|.+...-. +.+.+...++.|..
T Consensus 291 ~~~~i~gItNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~ 370 (601)
T TIGR02094 291 EEVPIGYVTNGVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLR 370 (601)
T ss_pred ccCCccceeCCccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 13357789999999988765432210 00111111111110
Q ss_pred ---ccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhcc--C--CCeEEEEEeCcCCCCCCcchHHHHHHHH
Q 003985 557 ---PEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL--R--ELVNLVVVAGYIDVNKSKDREEIAEIEK 629 (781)
Q Consensus 557 ---~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~--~--~~~~LvIVG~g~~~~~~~d~ee~~~~~~ 629 (781)
..+.-..+|...+++.+++++++|+..+||.+.+++++.++.+. . .+++||+.|.+.. .|..-++.++.
T Consensus 371 ~g~~~~~~~~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p----~d~~gk~~i~~ 446 (601)
T TIGR02094 371 RGADAAILMATDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHP----ADGEGKEIIQR 446 (601)
T ss_pred ccCcchhhhhhccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc----ccchHHHHHHH
Confidence 00000135555678999999999999999999999998887641 1 3599999999865 34555667888
Q ss_pred HHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEE-cCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccC
Q 003985 630 MHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQ-PAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG 707 (781)
Q Consensus 630 l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~-PS~-~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg 707 (781)
+.+++++....++|.|+- .. +..+.+.+-.++|++++ ||. +|++|++=+=||..|.+.+++..|...|.. ++
T Consensus 447 i~~la~~~~~~~kv~f~~----~Y-d~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~ 520 (601)
T TIGR02094 447 IVEFSKRPEFRGRIVFLE----NY-DINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DG 520 (601)
T ss_pred HHHHHhcccCCCCEEEEc----CC-CHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CC
Confidence 888888755678999985 23 44566666557999999 999 999999999999999999999999998877 67
Q ss_pred CeEEEECC------------CCHHHHHHHHHHHH-HhccCC-----HHHHHHHHHHHHHHHHHhcCcchhhhccchHHH
Q 003985 708 ASGFHIDP------------YHPDQAAELMADFF-GKCKEN-----PSHWKKISDGGLKRIYERLVVSSDGIVDPSPFV 768 (781)
Q Consensus 708 ~~G~lv~p------------~d~e~lA~~I~~~l-~~l~~d-----p~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~l 768 (781)
.|||.|.+ .|++++-++|.+.+ ....++ |..|.+|.++|.+.....|||++| ++.|.++
T Consensus 521 ~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~--a~~Y~~~ 597 (601)
T TIGR02094 521 DNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRM--VREYVDK 597 (601)
T ss_pred CcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHH--HHHHHHH
Confidence 89999984 89999999997665 223333 667999999999887778999765 4556554
No 87
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.78 E-value=2.9e-17 Score=180.52 Aligned_cols=234 Identities=12% Similarity=0.121 Sum_probs=161.3
Q ss_pred Cc-eEEEEcCCCch---HHHHHH--HHHcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEe
Q 003985 407 FP-DFIIGNYSDGN---LVASLL--AYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480 (781)
Q Consensus 407 ~p-DIIh~~~~~~~---lva~ll--ar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt 480 (781)
++ |+||.+++... +...++ .++.|+|+++++|++++........ + ...+...++.||.||+
T Consensus 63 ~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~~~----------~---~~~~~~~~~~aD~iI~ 129 (333)
T PRK09814 63 KPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSNYY----------L---MKEEIDMLNLADVLIV 129 (333)
T ss_pred CCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccccch----------h---hHHHHHHHHhCCEEEE
Confidence 55 99999887542 122222 2344899999999987643211100 0 1235678899999999
Q ss_pred cCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccc
Q 003985 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (781)
Q Consensus 481 ~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~ 560 (781)
.|....+.+++ .|+. ..++.++++..+.....+.
T Consensus 130 ~S~~~~~~l~~--------------------~g~~--~~~i~~~~~~~~~~~~~~~------------------------ 163 (333)
T PRK09814 130 HSKKMKDRLVE--------------------EGLT--TDKIIVQGIFDYLNDIELV------------------------ 163 (333)
T ss_pred CCHHHHHHHHH--------------------cCCC--cCceEeccccccccccccc------------------------
Confidence 99987663221 2332 4567666655433111000
Q ss_pred ccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003985 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (781)
Q Consensus 561 ~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~ 640 (781)
. ....++.|+|+|++...+++. ...++++|+|+|+|+. .+ ...
T Consensus 164 -~-----~~~~~~~i~yaG~l~k~~~l~----------~~~~~~~l~i~G~g~~------------~~---------~~~ 206 (333)
T PRK09814 164 -K-----TPSFQKKINFAGNLEKSPFLK----------NWSQGIKLTVFGPNPE------------DL---------ENS 206 (333)
T ss_pred -c-----cccCCceEEEecChhhchHHH----------hcCCCCeEEEECCCcc------------cc---------ccC
Confidence 0 023456899999999543211 1236799999999976 11 245
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCC-----------CCCCcHHHHHHHHcCCcEEEcCccccccccccCCe
Q 003985 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-----------YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGAS 709 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-----------~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~ 709 (781)
++|.|+| .++.+++..+++. |+.+.+.. .-++|.++.|+||||+|||+++.++..|+|+++.+
T Consensus 207 ~~V~f~G----~~~~eel~~~l~~--~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~ 280 (333)
T PRK09814 207 ANISYKG----WFDPEELPNELSK--GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGL 280 (333)
T ss_pred CCeEEec----CCCHHHHHHHHhc--CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCc
Confidence 7899999 6778999999985 44443321 13578899999999999999999999999999999
Q ss_pred EEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 003985 710 GFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (781)
Q Consensus 710 G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v 750 (781)
|++++ +.++++++|..+ +++.+++|++++++.+
T Consensus 281 G~~v~--~~~el~~~l~~~------~~~~~~~m~~n~~~~~ 313 (333)
T PRK09814 281 GFVVD--SLEELPEIIDNI------TEEEYQEMVENVKKIS 313 (333)
T ss_pred eEEeC--CHHHHHHHHHhc------CHHHHHHHHHHHHHHH
Confidence 99998 778899888653 4577899999999877
No 88
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.77 E-value=3.3e-17 Score=182.43 Aligned_cols=249 Identities=14% Similarity=0.152 Sum_probs=161.6
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHH
Q 003985 406 GFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (781)
Q Consensus 406 ~~pDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (781)
.+||+||++.+.+ .......+++.|+|+++..+.. .|...... . ....+.+|.++++++.
T Consensus 84 ~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~----------~~~~~~~~--------~-~~~~~~~d~i~~~~~~ 144 (380)
T PRK00025 84 EPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPS----------VWAWRQGR--------A-FKIAKATDHVLALFPF 144 (380)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCc----------hhhcCchH--------H-HHHHHHHhhheeCCcc
Confidence 4899999876432 3333345667799988765431 11100000 0 1236678999999875
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccccc
Q 003985 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (781)
Q Consensus 485 ~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~ 564 (781)
..+. +.. .|+ ++.++.|.+......+..... .++++
T Consensus 145 ~~~~-------~~~-------------~g~-----~~~~~G~p~~~~~~~~~~~~~-------------------~~~~l 180 (380)
T PRK00025 145 EAAF-------YDK-------------LGV-----PVTFVGHPLADAIPLLPDRAA-------------------ARARL 180 (380)
T ss_pred CHHH-------HHh-------------cCC-----CeEEECcCHHHhcccccChHH-------------------HHHHc
Confidence 5431 100 121 355555554332211111111 11336
Q ss_pred CCCCCCCCCEEE-EEe-eccCC-CChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc-CCC
Q 003985 565 GTLSDRSKPIVF-SMA-RLDHV-KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY-KLD 640 (781)
Q Consensus 565 g~l~~~~k~iIl-~vG-RL~~~-Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el-~L~ 640 (781)
|+ ++++++|+ +.| |.... +++..++++++++.+..++++++++|+++. ..+.++++++++ ++.
T Consensus 181 ~~--~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~-----------~~~~~~~~~~~~~~~~ 247 (380)
T PRK00025 181 GL--DPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK-----------RREQIEEALAEYAGLE 247 (380)
T ss_pred CC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh-----------hHHHHHHHHhhcCCCC
Confidence 65 45566654 444 44443 457899999999877778899999987432 245566677766 553
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc-----------------Cccccccc
Q 003985 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-----------------CHGGPAEI 703 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT-----------------~~GG~~Ei 703 (781)
+.+.. +++..+|+ .+|++|.+| |.+.+|||+||+|+|++ +.++.+++
T Consensus 248 --v~~~~--------~~~~~~~~-~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (380)
T PRK00025 248 --VTLLD--------GQKREAMA-AADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNL 311 (380)
T ss_pred --eEEEc--------ccHHHHHH-hCCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHH
Confidence 55543 36788888 599999997 88989999999999987 56777888
Q ss_pred cccCC--eEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 003985 704 IEHGA--SGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (781)
Q Consensus 704 I~dg~--~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v 750 (781)
+.++. .|++.+..|++++++++.+++ .|++.+++|++++.+..
T Consensus 312 ~~~~~~~~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~ 356 (380)
T PRK00025 312 LAGRELVPELLQEEATPEKLARALLPLL----ADGARRQALLEGFTELH 356 (380)
T ss_pred hcCCCcchhhcCCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHH
Confidence 87764 557778889999999998887 89999999999875544
No 89
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.76 E-value=7.5e-17 Score=179.05 Aligned_cols=265 Identities=14% Similarity=0.116 Sum_probs=172.7
Q ss_pred HHHHHHHHHHcCCCceEEEEcCC-CchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHH
Q 003985 394 EDVGSEITAELQGFPDFIIGNYS-DGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAM 472 (781)
Q Consensus 394 ~~~~~~i~~~l~~~pDIIh~~~~-~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~ 472 (781)
..+.+.+.+ .+||+||+|.. ...+.+.++++..|+|++.+-+++ .+..... .|.. . .. .....
T Consensus 76 ~~l~~~l~~---~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~--~~~~--~----~~----r~~~~ 139 (365)
T TIGR00236 76 EGLEELLLE---EKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYS--PMPE--E----IN----RQLTG 139 (365)
T ss_pred HHHHHHHHH---cCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCC--CCcc--H----HH----HHHHH
Confidence 344444444 38999999964 346788999999999988664443 1100000 0100 0 00 01123
Q ss_pred hhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHH-HHHHhhhhcchh
Q 003985 473 NNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK-QKRLTALHGSIE 551 (781)
Q Consensus 473 ~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~-~~rl~~~~~~i~ 551 (781)
+.+|.++++|....+.+. ..|++ ..++.+++||+....+.+.... ...
T Consensus 140 ~~ad~~~~~s~~~~~~l~--------------------~~G~~--~~~I~vign~~~d~~~~~~~~~~~~~--------- 188 (365)
T TIGR00236 140 HIADLHFAPTEQAKDNLL--------------------RENVK--ADSIFVTGNTVIDALLTNVEIAYSSP--------- 188 (365)
T ss_pred HHHHhccCCCHHHHHHHH--------------------HcCCC--cccEEEeCChHHHHHHHHHhhccchh---------
Confidence 358999999988765221 12444 6799999999632221111000 000
Q ss_pred hhccCccccccccCCCCCCCCCEEEEEe-ecc-CCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHH
Q 003985 552 QLLFDPEQNDEHVGTLSDRSKPIVFSMA-RLD-HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEK 629 (781)
Q Consensus 552 ~~l~~~~~~~~~~g~l~~~~k~iIl~vG-RL~-~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~ 629 (781)
.++.++. +++++++.+ |.. ..||+..+++|+.++.+..++++++++|++.. ...+
T Consensus 189 --------~~~~~~~----~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~----------~~~~- 245 (365)
T TIGR00236 189 --------VLSEFGE----DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNP----------VVRE- 245 (365)
T ss_pred --------HHHhcCC----CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCCh----------HHHH-
Confidence 0112331 234555544 542 45899999999999877778899998865432 1111
Q ss_pred HHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCC
Q 003985 630 MHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGA 708 (781)
Q Consensus 630 l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT-~~GG~~EiI~dg~ 708 (781)
.+.+.++..++|+|+| .+...++..++++ +|+++.+| |..++|||+||+|||++ +.|+..|++.++
T Consensus 246 --~~~~~~~~~~~v~~~~----~~~~~~~~~~l~~-ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g- 312 (365)
T TIGR00236 246 --PLHKHLGDSKRVHLIE----PLEYLDFLNLAAN-SHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG- 312 (365)
T ss_pred --HHHHHhCCCCCEEEEC----CCChHHHHHHHHh-CCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-
Confidence 1334456667899998 5667788889995 99999987 66789999999999996 678888988766
Q ss_pred eEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 003985 709 SGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGG 746 (781)
Q Consensus 709 ~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a 746 (781)
+|+++ +.|+++++++|.+++ .|++.+++++++.
T Consensus 313 ~~~lv-~~d~~~i~~ai~~ll----~~~~~~~~~~~~~ 345 (365)
T TIGR00236 313 TNKLV-GTDKENITKAAKRLL----TDPDEYKKMSNAS 345 (365)
T ss_pred ceEEe-CCCHHHHHHHHHHHH----hChHHHHHhhhcC
Confidence 55666 479999999998877 7999888887654
No 90
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.75 E-value=1.1e-16 Score=176.70 Aligned_cols=250 Identities=14% Similarity=0.122 Sum_probs=167.3
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHH
Q 003985 406 GFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (781)
Q Consensus 406 ~~pDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (781)
.+||+||+|.... .+.+.++++..|+|++++.|+... +.... .|... .....+.+|.++++|+.
T Consensus 87 ~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s--~~~~~-~~~~~------------r~~~~~~ad~~~~~s~~ 151 (363)
T cd03786 87 EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRS--FDRGM-PDEEN------------RHAIDKLSDLHFAPTEE 151 (363)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEeccccc--CCCCC-CchHH------------HHHHHHHhhhccCCCHH
Confidence 3899999997543 567888889999998876665321 10000 11100 11245678999999987
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCceEEecCCC-cCCCCCCCcHHHHHHhhhhcchhhhccCccccccc
Q 003985 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 563 (781)
Q Consensus 485 ~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGv-D~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~ 563 (781)
..+.+. ..|++ ..++.+++|++ |...+.+...... ..+..
T Consensus 152 ~~~~l~--------------------~~G~~--~~kI~vign~v~d~~~~~~~~~~~~-----------------~~~~~ 192 (363)
T cd03786 152 ARRNLL--------------------QEGEP--PERIFVVGNTMIDALLRLLELAKKE-----------------LILEL 192 (363)
T ss_pred HHHHHH--------------------HcCCC--cccEEEECchHHHHHHHHHHhhccc-----------------hhhhh
Confidence 755211 12444 77899999985 4322211110000 00123
Q ss_pred cCCCCCCCCCEEEEEeeccC---CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC-
Q 003985 564 VGTLSDRSKPIVFSMARLDH---VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL- 639 (781)
Q Consensus 564 ~g~l~~~~k~iIl~vGRL~~---~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L- 639 (781)
+|+ ++++.++++.||... .||++.+++++.++... ++.+++.|+++. .+++++.++++++
T Consensus 193 ~~~--~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~~~vi~~~~~~~------------~~~l~~~~~~~~~~ 256 (363)
T cd03786 193 LGL--LPKKYILVTLHRVENVDDGEQLEEILEALAELAEE--DVPVVFPNHPRT------------RPRIREAGLEFLGH 256 (363)
T ss_pred ccc--CCCCEEEEEeCCccccCChHHHHHHHHHHHHHHhc--CCEEEEECCCCh------------HHHHHHHHHhhccC
Confidence 454 344557778999875 79999999999988653 466666666543 5677788888876
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccCCeEEEECCC-C
Q 003985 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHGASGFHIDPY-H 717 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~-GG~~EiI~dg~~G~lv~p~-d 717 (781)
.++|+|+| .....++..+++. +|++|.||. | ++.|||++|+|||+++. +...+.+++ |..+... |
T Consensus 257 ~~~v~~~~----~~~~~~~~~l~~~-ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~---g~~~~~~~~ 323 (363)
T cd03786 257 HPNVLLIS----PLGYLYFLLLLKN-ADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVES---GTNVLVGTD 323 (363)
T ss_pred CCCEEEEC----CcCHHHHHHHHHc-CcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhe---eeEEecCCC
Confidence 67899998 4456788888884 999999984 4 47899999999999964 446666644 4444333 7
Q ss_pred HHHHHHHHHHHHHhccCCHHHHHHH
Q 003985 718 PDQAAELMADFFGKCKENPSHWKKI 742 (781)
Q Consensus 718 ~e~lA~~I~~~l~~l~~dp~~~~~~ 742 (781)
+++++++|.+++ +++..+.+|
T Consensus 324 ~~~i~~~i~~ll----~~~~~~~~~ 344 (363)
T cd03786 324 PEAILAAIEKLL----SDEFAYSLM 344 (363)
T ss_pred HHHHHHHHHHHh----cCchhhhcC
Confidence 999999998877 787776665
No 91
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.74 E-value=1.4e-15 Score=159.99 Aligned_cols=276 Identities=18% Similarity=0.264 Sum_probs=194.6
Q ss_pred HcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccc--------CCCC-h------hhHhhhhccccchhhhhH
Q 003985 403 ELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTK--------YPDS-D------IYWKKFDEKYHFSCQFTA 467 (781)
Q Consensus 403 ~l~~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k--------~~~s-~------~~~k~~~~~y~f~~~~~~ 467 (781)
..+..|||.+-....+ +.--..++..++|++...|-.--.+ .+.+ - .||+.+...|.
T Consensus 146 i~r~~Pdi~IDtMGY~-fs~p~~r~l~~~~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY~rlFa~lY~------- 217 (465)
T KOG1387|consen 146 IIRFPPDIFIDTMGYP-FSYPIFRRLRRIPVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAYWRLFALLYQ------- 217 (465)
T ss_pred HHhCCchheEecCCCc-chhHHHHHHccCceEEEEecccccHHHHHHHHhhhhcchhhhHHHHHHHHHHHHHH-------
Confidence 3466899988433222 1112234466899999988532111 0011 1 12222222221
Q ss_pred HHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhh
Q 003985 468 DLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH 547 (781)
Q Consensus 468 e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~ 547 (781)
.+=..||.++++|......+++.++ ..+..+|+|..+.+...
T Consensus 218 --~~G~~ad~vm~NssWT~nHI~qiW~-----------------------~~~~~iVyPPC~~e~lk------------- 259 (465)
T KOG1387|consen 218 --SAGSKADIVMTNSSWTNNHIKQIWQ-----------------------SNTCSIVYPPCSTEDLK------------- 259 (465)
T ss_pred --hccccceEEEecchhhHHHHHHHhh-----------------------ccceeEEcCCCCHHHHH-------------
Confidence 3445799999999765443333221 23666777766654110
Q ss_pred cchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhcc------CCCeEEEEEeCcCCCCCCcch
Q 003985 548 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL------RELVNLVVVAGYIDVNKSKDR 621 (781)
Q Consensus 548 ~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~------~~~~~LvIVG~g~~~~~~~d~ 621 (781)
+..+. ...+.+.++++|.+.+.||+. +++.++-.... .+.++|+|||+... .
T Consensus 260 --------------s~~~t-e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRn------e 317 (465)
T KOG1387|consen 260 --------------SKFGT-EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRN------E 317 (465)
T ss_pred --------------HHhcc-cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCC------h
Confidence 01111 245678899999999999999 66555443322 35689999999876 4
Q ss_pred HHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccc
Q 003985 622 EEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPA 701 (781)
Q Consensus 622 ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~ 701 (781)
+..+..+.|+.++++++++++|.|-- .++.+++..++.. |.+.|+.-+.|-||+.|+|+||+|+-.|+.+.||+.
T Consensus 318 eD~ervk~Lkd~a~~L~i~~~v~F~~----N~Py~~lv~lL~~-a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~ 392 (465)
T KOG1387|consen 318 EDEERVKSLKDLAEELKIPKHVQFEK----NVPYEKLVELLGK-ATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPL 392 (465)
T ss_pred hhHHHHHHHHHHHHhcCCccceEEEe----cCCHHHHHHHhcc-ceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCc
Confidence 55677899999999999999999998 7899999999995 999999999999999999999999999999988875
Q ss_pred -ccccc---CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcc
Q 003985 702 -EIIEH---GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVS 757 (781)
Q Consensus 702 -EiI~d---g~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~ 757 (781)
|||.+ ..+||+.+ +.++.|++|.++.. .|++.+..|+.+||..+ .+|+-.
T Consensus 393 lDIV~~~~G~~tGFla~--t~~EYaE~iLkIv~---~~~~~r~~~r~~AR~s~-~RFsE~ 446 (465)
T KOG1387|consen 393 LDIVTPWDGETTGFLAP--TDEEYAEAILKIVK---LNYDERNMMRRNARKSL-ARFGEL 446 (465)
T ss_pred eeeeeccCCccceeecC--ChHHHHHHHHHHHH---cCHHHHHHHHHHHHHHH-HHhhHH
Confidence 46653 34799984 78899999998874 88888999999999888 677653
No 92
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.71 E-value=7.3e-16 Score=185.77 Aligned_cols=319 Identities=13% Similarity=0.118 Sum_probs=210.6
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhh
Q 003985 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (781)
Q Consensus 396 ~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~ 474 (781)
+...+.+..+ .-|+|..|.+.-.+++..+.++. ..++.+..|..++.. .+ |+.+.+-..-+..|-.
T Consensus 221 FA~~i~~~~~-~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~----Ei--------fr~LP~r~elL~glL~ 287 (934)
T PLN03064 221 FADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSS----EI--------HRTLPSRSELLRSVLA 287 (934)
T ss_pred HHHHHHHhcC-CCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCCh----HH--------HhhCCcHHHHHHHHhc
Confidence 3444444432 34899999999888888887764 578889999765532 21 2222222344567889
Q ss_pred CCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC--CceEEecCCCcCCCCCCCcH---HHHHHhhhhcc
Q 003985 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD--PKFNIVSPGADMDIYFPYSE---KQKRLTALHGS 549 (781)
Q Consensus 475 AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~--~k~~VIpnGvD~~~f~p~~~---~~~rl~~~~~~ 549 (781)
||.|=..|+..+..+-....+.... . ....++.... .++.+.|-|||.+.|..... ...+...+
T Consensus 288 aDlIGFqT~~y~rhFl~~c~rlLg~-----~---~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~l--- 356 (934)
T PLN03064 288 ADLVGFHTYDYARHFVSACTRILGL-----E---GTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKEL--- 356 (934)
T ss_pred CCeEEeCCHHHHHHHHHHHHHHhCc-----c---ccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHH---
Confidence 9999999987765433322111100 0 0011222112 24667899999988754321 11222111
Q ss_pred hhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeE----EEEEeCcCCCCCCcchHHHH
Q 003985 550 IEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVN----LVVVAGYIDVNKSKDREEIA 625 (781)
Q Consensus 550 i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~----LvIVG~g~~~~~~~d~ee~~ 625 (781)
++.+ .++.+|++++|++..||+...+.||+++.+.+|+++ |+-|+-.. .+.-+++++
T Consensus 357 -----------r~~~-----~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~ps---r~~v~eY~~ 417 (934)
T PLN03064 357 -----------KERF-----AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPT---RTDVPEYQK 417 (934)
T ss_pred -----------HHHh-----CCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCC---CCCcHHHHH
Confidence 1112 356799999999999999999999999887777653 44343221 111233444
Q ss_pred HHHHHHHHHHHcCC-CCc-----EEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCC----cEEEc
Q 003985 626 EIEKMHELMKTYKL-DGQ-----FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL----PTFAT 695 (781)
Q Consensus 626 ~~~~l~~li~el~L-~~~-----V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl----PVIaT 695 (781)
...++.+++.+.+- .+. |+++. ..++.+++..+|+ .+|++|.||..|||+++..|||+|+. +.|.|
T Consensus 418 l~~~V~~~V~rIN~~fg~~~w~Pv~~~~---~~l~~eeL~AlY~-~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILS 493 (934)
T PLN03064 418 LTSQVHEIVGRINGRFGTLTAVPIHHLD---RSLDFHALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILS 493 (934)
T ss_pred HHHHHHHHHHHHhhhccCCCcceEEEec---cCCCHHHHHHHHH-hCCEEEeCccccccCchHHHHHHhhcCCCCCeEEe
Confidence 45555555554321 112 44443 2578999999999 59999999999999999999999954 44449
Q ss_pred CccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003985 696 CHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 696 ~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll 769 (781)
..+|.++.+ +..+++|+|.|.+++|++|.+++. .+++.++++.+.+++++ .++||. .+++.+.+-+
T Consensus 494 EfaGaa~~L--~~~AllVNP~D~~~vA~AI~~AL~---M~~~Er~~r~~~~~~~V-~~~d~~--~Wa~~fl~~L 559 (934)
T PLN03064 494 EFAGAAQSL--GAGAILVNPWNITEVAASIAQALN---MPEEEREKRHRHNFMHV-TTHTAQ--EWAETFVSEL 559 (934)
T ss_pred CCCchHHHh--CCceEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHhhc-ccCCHH--HHHHHHHHHH
Confidence 999988888 456999999999999999998873 58999999999999999 667873 4445444433
No 93
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.66 E-value=8.2e-15 Score=169.41 Aligned_cols=170 Identities=10% Similarity=0.167 Sum_probs=145.9
Q ss_pred CCEEEEEe--eccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC---------
Q 003985 572 KPIVFSMA--RLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD--------- 640 (781)
Q Consensus 572 k~iIl~vG--RL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~--------- 640 (781)
+..+++++ |+ +.|.++.+++++.++....|++.|.+.|-+.+ ....+.++++++++++.
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~---------~~~~~~l~~~i~~~~~~~~~~~~~~~ 388 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNND---------NDITQLLEDILEQINEEYNQDKNFFS 388 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCc---------hhHHHHHHHHHHHHHhhhchhhhccc
Confidence 33577788 99 99999999999999999999999999998853 12346677777777666
Q ss_pred --------------------CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccc
Q 003985 641 --------------------GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP 700 (781)
Q Consensus 641 --------------------~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~ 700 (781)
++|.|.|.++ ..++.+.+.. +.++|.+|..|+|+ +.+||+++|+|+| .-|+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~----e~dl~~~~~~-arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~ 459 (519)
T TIGR03713 389 LSEQDENQPILQTDEEQKEKERIAFTTLTN----EEDLISALDK-LRLIIDLSKEPDLY-TQISGISAGIPQI---NKVE 459 (519)
T ss_pred cchhhhhhhcccchhhcccccEEEEEecCC----HHHHHHHHhh-heEEEECCCCCChH-HHHHHHHcCCCee---ecCC
Confidence 7899999544 3478888886 99999999999999 9999999999999 5578
Q ss_pred ccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003985 701 AEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 701 ~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll 769 (781)
.++|.||+||+++ +|.++++++|..+| .++..|++++..+.+.+ ++||- ..+...|++++
T Consensus 460 ~~~V~d~~NG~li--~d~~~l~~al~~~L----~~~~~wn~~~~~sy~~~-~~yS~--~~i~~kW~~~~ 519 (519)
T TIGR03713 460 TDYVEHNKNGYII--DDISELLKALDYYL----DNLKNWNYSLAYSIKLI-DDYSS--ENIIERLNELI 519 (519)
T ss_pred ceeeEcCCCcEEe--CCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HHhhH--HHHHHHHHhhC
Confidence 9999999999999 69999999999888 89999999999999999 78876 56778888753
No 94
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=99.64 E-value=5.1e-14 Score=167.76 Aligned_cols=332 Identities=14% Similarity=0.124 Sum_probs=219.7
Q ss_pred cCCCceEEEEcCCCchHHHH-----HHHHH----------cCCcEEEEecCCcccc--CCCChhh--------------H
Q 003985 404 LQGFPDFIIGNYSDGNLVAS-----LLAYK----------MGITQCTIAHALEKTK--YPDSDIY--------------W 452 (781)
Q Consensus 404 l~~~pDIIh~~~~~~~lva~-----llar~----------~gvp~v~t~H~l~~~k--~~~s~~~--------------~ 452 (781)
+..+||+||+|.+.++++.. ++... .....|+|.|++.+.. .-..+.. +
T Consensus 245 lg~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lgl~~ 324 (778)
T cd04299 245 LGIKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELGLSR 324 (778)
T ss_pred hCCCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcCCCH
Confidence 45689999999999988777 55321 1467899999976543 1111111 1
Q ss_pred hhhhccc-cc----hhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCC
Q 003985 453 KKFDEKY-HF----SCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG 527 (781)
Q Consensus 453 k~~~~~y-~f----~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnG 527 (781)
..+.... .+ ..++..-..++..|+.|.++|.-.-.-+++.+.. ++ .|.+....++.-|.||
T Consensus 325 ~~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~-----------~~---~g~p~~~~~i~~ITNG 390 (778)
T cd04299 325 DRFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAG-----------LW---PGFPVEEVPIGHVTNG 390 (778)
T ss_pred HHHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhh-----------hh---ccCCcccCceeceeCC
Confidence 1110000 00 0124445678999999999997552222222211 11 1233224568889999
Q ss_pred CcCCCCC-CCcHHHH---------------------------HHhhhhcchhhhccCcc---------------cccccc
Q 003985 528 ADMDIYF-PYSEKQK---------------------------RLTALHGSIEQLLFDPE---------------QNDEHV 564 (781)
Q Consensus 528 vD~~~f~-p~~~~~~---------------------------rl~~~~~~i~~~l~~~~---------------~~~~~~ 564 (781)
|+...+. |....-- .+.+.+...++.|.... ..-...
T Consensus 391 Vh~~~W~~P~~~~l~~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~ 470 (778)
T cd04299 391 VHVPTWVAPEMRELYDRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIGEA 470 (778)
T ss_pred cchhhhcCHHHHHHHHHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhhhc
Confidence 9998776 3211110 00001111111110000 000012
Q ss_pred CCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhcc----CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003985 565 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL----RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (781)
Q Consensus 565 g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~----~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~ 640 (781)
+...+++.++|+++.|+..+|+.+.++..+.++.+. ...++||+.|.+.. .|..-++.++.+.+++++....
T Consensus 471 ~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP----~d~~gK~iIk~i~~~a~~p~~~ 546 (778)
T cd04299 471 DDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHP----ADEPGKELIQEIVEFSRRPEFR 546 (778)
T ss_pred CCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc----cchHHHHHHHHHHHHHhCcCCC
Confidence 444477888999999999999999999988777541 12599999999865 4555677888898888866777
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECC---
Q 003985 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDP--- 715 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p--- 715 (781)
++|.|+- .. +..+.+.+-..+|++++||+ +|++|++=+=||.-|.+.+++-.|...|.- ++.|||.|.+
T Consensus 547 ~kVvfle----~Y-d~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~~~ 620 (778)
T cd04299 547 GRIVFLE----DY-DMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDGDE 620 (778)
T ss_pred CcEEEEc----CC-CHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCCcc
Confidence 8999986 33 44566666657999999999 999999999999999999999999999987 8899999987
Q ss_pred ---------CCHHHHHHHHHHHHH-hccC-----CHHHHHHHHHHHHHHHHHhcCcchh
Q 003985 716 ---------YHPDQAAELMADFFG-KCKE-----NPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 716 ---------~d~e~lA~~I~~~l~-~l~~-----dp~~~~~~s~~a~~~v~~~ysw~~~ 759 (781)
.|++++-+.|.+-+. ...+ .|..|.+|.+++++.+...|||++|
T Consensus 621 ~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rm 679 (778)
T cd04299 621 YEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERM 679 (778)
T ss_pred ccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHH
Confidence 456666666644332 2223 3788999999999998899999887
No 95
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.60 E-value=2.8e-15 Score=141.93 Aligned_cols=130 Identities=21% Similarity=0.321 Sum_probs=96.9
Q ss_pred CCEEEEEeeccCCCChHHHHH-HHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003985 572 KPIVFSMARLDHVKNMTGLVE-CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (781)
Q Consensus 572 k~iIl~vGRL~~~Kgl~~Lie-A~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~ 650 (781)
.++|+++|++.+.||++.+++ ++.++.+..|++.|+|+|.+++ +++++ ..++|+|+|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~--------------~l~~~-----~~~~v~~~g--- 59 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD--------------ELKRL-----RRPNVRFHG--- 59 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS---------------HHCCH-----HHCTEEEE----
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH--------------HHHHh-----cCCCEEEcC---
Confidence 357999999999999999999 9999998889999999999765 23333 235899999
Q ss_pred CcCChHHHHHHHHccCcEEEEcCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHH
Q 003985 651 NRARNGELYRYIADTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFF 729 (781)
Q Consensus 651 ~~v~~~el~~~la~aadvfV~PS~-~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l 729 (781)
.+ +++..+++. +|+++.|+. .++++.+++|||++|+|||+++. +..++++....|.++ ++|+++++++|.+++
T Consensus 60 -~~--~e~~~~l~~-~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 60 -FV--EELPEILAA-ADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp -S---HHHHHHHHC--SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred -CH--HHHHHHHHh-CCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 44 589999995 999999985 68999999999999999999988 677777666778888 889999999998876
No 96
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.56 E-value=8.8e-13 Score=148.02 Aligned_cols=249 Identities=16% Similarity=0.119 Sum_probs=155.5
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHH
Q 003985 406 GFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (781)
Q Consensus 406 ~~pDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (781)
.+||+|++....+ ++.....++.+|+|+++.+ +.+- +.|... .-+...+.+|.|+++++.
T Consensus 88 ~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i-~P~~-------waw~~~-----------~~r~l~~~~d~v~~~~~~ 148 (385)
T TIGR00215 88 AKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYI-SPQV-------WAWRKW-----------RAKKIEKATDFLLAILPF 148 (385)
T ss_pred cCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEe-CCcH-------hhcCcc-----------hHHHHHHHHhHhhccCCC
Confidence 4999999887644 5656668888999988544 1111 122211 022455689999999976
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCC-CcHHHHHHhhhhcchhhhccCccccccc
Q 003985 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFP-YSEKQKRLTALHGSIEQLLFDPEQNDEH 563 (781)
Q Consensus 485 ~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p-~~~~~~rl~~~~~~i~~~l~~~~~~~~~ 563 (781)
+.+. |.. . ..+..++.|++-.+.... ...... ++.
T Consensus 149 e~~~-------~~~-------------~-----g~~~~~vGnPv~~~~~~~~~~~~~~-------------------r~~ 184 (385)
T TIGR00215 149 EKAF-------YQK-------------K-----NVPCRFVGHPLLDAIPLYKPDRKSA-------------------REK 184 (385)
T ss_pred cHHH-------HHh-------------c-----CCCEEEECCchhhhccccCCCHHHH-------------------HHH
Confidence 6441 100 0 225556767663322211 111111 133
Q ss_pred cCCCCCCCCCEEEEEe--eccC-CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003985 564 VGTLSDRSKPIVFSMA--RLDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (781)
Q Consensus 564 ~g~l~~~~k~iIl~vG--RL~~-~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~ 640 (781)
+|+ ++++++|+.+| |..+ .|++..+++++..+.+..|++++++++.+.. ..+.+.++.++++..
T Consensus 185 lgl--~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-----------~~~~~~~~~~~~~~~ 251 (385)
T TIGR00215 185 LGI--DHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-----------RRLQFEQIKAEYGPD 251 (385)
T ss_pred cCC--CCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-----------hHHHHHHHHHHhCCC
Confidence 666 56678776653 7776 7899999999999988778898877654422 134556666677666
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-cc----------------ccccc
Q 003985 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HG----------------GPAEI 703 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~-~G----------------G~~Ei 703 (781)
.+|.+.+. +...+|+ ++|++|.+| |.+.+|||+||+|+|.+. .. +.+.+
T Consensus 252 ~~v~~~~~--------~~~~~l~-aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~ni 317 (385)
T TIGR00215 252 LQLHLIDG--------DARKAMF-AADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNI 317 (385)
T ss_pred CcEEEECc--------hHHHHHH-hCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHH
Confidence 67776651 3456777 599999999 888889999999999882 11 12222
Q ss_pred cccCCeEE-EE-CCCCHHHHHHHHHHHHHhccCCH----HHHHHHHHHHHH
Q 003985 704 IEHGASGF-HI-DPYHPDQAAELMADFFGKCKENP----SHWKKISDGGLK 748 (781)
Q Consensus 704 I~dg~~G~-lv-~p~d~e~lA~~I~~~l~~l~~dp----~~~~~~s~~a~~ 748 (781)
+.+....- ++ +.-+++.+++.+.+++ .|+ +.++++.+.-.+
T Consensus 318 l~~~~~~pel~q~~~~~~~l~~~~~~ll----~~~~~~~~~~~~~~~~~~~ 364 (385)
T TIGR00215 318 LANRLLVPELLQEECTPHPLAIALLLLL----ENGLKAYKEMHRERQFFEE 364 (385)
T ss_pred hcCCccchhhcCCCCCHHHHHHHHHHHh----cCCcccHHHHHHHHHHHHH
Confidence 32221111 11 2336888999998877 888 888777665443
No 97
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.55 E-value=3.2e-13 Score=153.60 Aligned_cols=318 Identities=14% Similarity=0.149 Sum_probs=171.1
Q ss_pred CceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCccccCC---CChhh-------HhhhhccccchhhhhHHHHHHhhC
Q 003985 407 FPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYP---DSDIY-------WKKFDEKYHFSCQFTADLIAMNNA 475 (781)
Q Consensus 407 ~pDIIh~~~~~~~lva~llar~-~gvp~v~t~H~l~~~k~~---~s~~~-------~k~~~~~y~f~~~~~~e~~a~~~A 475 (781)
+.-+.|+|-|..+....++.++ ..|..|+|.|+.-..++. ..++| +..-...+....+...|+.+...|
T Consensus 143 ~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~A 222 (633)
T PF05693_consen 143 PKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYA 222 (633)
T ss_dssp EEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHS
T ss_pred CcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhc
Confidence 4457789999876544444433 468889999985433321 11122 112222334444566788899999
Q ss_pred CEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhh---
Q 003985 476 DFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQ--- 552 (781)
Q Consensus 476 D~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~--- 552 (781)
|...|+|+-.+...+..++ ...=.|+|||+|.+.|....+..+.....+..|.+
T Consensus 223 dvFTTVSeITa~Ea~~LL~-----------------------r~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~ 279 (633)
T PF05693_consen 223 DVFTTVSEITAKEAEHLLK-----------------------RKPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVR 279 (633)
T ss_dssp SEEEESSHHHHHHHHHHHS-----------------------S--SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHHH
T ss_pred CeeeehhhhHHHHHHHHhC-----------------------CCCCEEcCCCccccccccchHHHHHHHHHHHHHHHHHH
Confidence 9999999866554332211 22335789999998776654433322222233333
Q ss_pred -hccCccccccccCCCCCCCCCEEEEEeecc-CCCChHHHHHHHHHhhc----cCCCe---EEEEEeCcCCCCCCcchHH
Q 003985 553 -LLFDPEQNDEHVGTLSDRSKPIVFSMARLD-HVKNMTGLVECYGKNSQ----LRELV---NLVVVAGYIDVNKSKDREE 623 (781)
Q Consensus 553 -~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~-~~Kgl~~LieA~~~l~~----~~~~~---~LvIVG~g~~~~~~~d~ee 623 (781)
.++.. +.+ ..++..+|++.||.. +.||++.++||++++.. ...+. -|+|+=... .+.+.|.
T Consensus 280 ~~f~g~------~df-d~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~---~~~~ve~ 349 (633)
T PF05693_consen 280 GHFYGH------YDF-DLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKT---NSFNVES 349 (633)
T ss_dssp HHSTT---------S--GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SE---EEE-HHH
T ss_pred HHhccc------CCC-CccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCcc---CCcCHHH
Confidence 22322 222 123456688899998 69999999999999853 12232 344443221 0111110
Q ss_pred HH----------------------------------------------------------------------HHHHHHHH
Q 003985 624 IA----------------------------------------------------------------------EIEKMHEL 633 (781)
Q Consensus 624 ~~----------------------------------------------------------------------~~~~l~~l 633 (781)
.. ..+.+-..
T Consensus 350 l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~ 429 (633)
T PF05693_consen 350 LKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNM 429 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHH
Confidence 00 01112223
Q ss_pred HHHcCCC----C--cEEEecc---ccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccccc
Q 003985 634 MKTYKLD----G--QFRWIAA---QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEII 704 (781)
Q Consensus 634 i~el~L~----~--~V~flG~---~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI 704 (781)
+.+.+|. + +|.|.+. ..|.+-+-+.+.++.. +|+.|+||+||+||.|.+|+.++|+|+|+|+..|....+
T Consensus 430 irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~G-cdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~ 508 (633)
T PF05693_consen 430 IRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRG-CDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWM 508 (633)
T ss_dssp HHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHH-SSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHH
T ss_pred HHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhcc-CceeeeccccccccCChHHHhhcCCceeeccchhHHHHH
Confidence 3333332 2 2455541 2234555677888885 999999999999999999999999999999988877655
Q ss_pred cc-----CCeEEEE---CCCCHHHHHHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003985 705 EH-----GASGFHI---DPYHPDQAAELMADFFGK-CKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 705 ~d-----g~~G~lv---~p~d~e~lA~~I~~~l~~-l~~dp~~~~~~s~~a~~~v~~~ysw~~~ 759 (781)
.+ ...|+.| .-.+.++.++.|.+++.. |..++..+..+..++.+.. +..+|+..
T Consensus 509 ~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS-~~~dW~~~ 571 (633)
T PF05693_consen 509 QEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLS-DLADWKNF 571 (633)
T ss_dssp HTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHG-GGGBHHHH
T ss_pred HHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH-HhCCHHHH
Confidence 42 3456655 234677777777665544 3456677777777775544 88999875
No 98
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.54 E-value=2.6e-12 Score=135.77 Aligned_cols=371 Identities=14% Similarity=0.125 Sum_probs=230.1
Q ss_pred HHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHH
Q 003985 320 LLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSE 399 (781)
Q Consensus 320 a~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ 399 (781)
|..|++.|++|+ ++....+ ...+.+-..++++|+.+|-.+.....+ +.-.. -+..|.+.+.-.
T Consensus 33 A~Sla~~gf~Vd----liGy~~s--------~p~e~l~~hprI~ih~m~~l~~~~~~p----~~~~l-~lKvf~Qfl~Ll 95 (444)
T KOG2941|consen 33 ALSLAKLGFQVD----LIGYVES--------IPLEELLNHPRIRIHGMPNLPFLQGGP----RVLFL-PLKVFWQFLSLL 95 (444)
T ss_pred HHHHHHcCCeEE----EEEecCC--------CChHHHhcCCceEEEeCCCCcccCCCc----hhhhh-HHHHHHHHHHHH
Confidence 345899999999 7754421 123344445678898886655422111 11111 112222222211
Q ss_pred HHHHcCCCceEEEEcCCCc---hHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhcccc--chhhhhHHHHHHhh
Q 003985 400 ITAELQGFPDFIIGNYSDG---NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYH--FSCQFTADLIAMNN 474 (781)
Q Consensus 400 i~~~l~~~pDIIh~~~~~~---~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~--f~~~~~~e~~a~~~ 474 (781)
+.-...+.+|+|....+.+ -.++.+.+...|.+++++.|+..-+- .+..+ ...++ ..+-...|...-+.
T Consensus 96 ~aL~~~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl----~l~~~--~g~~h~lV~l~~~~E~~fgk~ 169 (444)
T KOG2941|consen 96 WALFVLRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSL----QLKLK--LGFQHPLVRLVRWLEKYFGKL 169 (444)
T ss_pred HHHHhccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHH----HHHhh--cCCCCchHHHHHHHHHHhhcc
Confidence 2111256899999888765 56777888889999999999864320 00111 00000 01112345666778
Q ss_pred CCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEec---C--CCcCCC----CCCCcHH----HH
Q 003985 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVS---P--GADMDI----YFPYSEK----QK 541 (781)
Q Consensus 475 AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIp---n--GvD~~~----f~p~~~~----~~ 541 (781)
||.-.|+|......+.+.+|- + +..|++ + +.+.+. |.+.... ..
T Consensus 170 a~~nLcVT~AMr~dL~qnWgi-------------------~----ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~a 226 (444)
T KOG2941|consen 170 ADYNLCVTKAMREDLIQNWGI-------------------N----RAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRA 226 (444)
T ss_pred cccchhhHHHHHHHHHHhcCC-------------------c----eeEEEecCCCCCCCchhHHHHHHhhhccccchhhh
Confidence 999999998887655555431 1 111111 1 011110 1111000 00
Q ss_pred HHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhc-------cCCCeEEEEEeCcCC
Q 003985 542 RLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ-------LRELVNLVVVAGYID 614 (781)
Q Consensus 542 rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~-------~~~~~~LvIVG~g~~ 614 (781)
| ....+..+...|...+...-... .+....++++.....+..++..|++|+....+ ..|.+-++|.|.||.
T Consensus 227 r-~~q~~~~~~taf~~k~~s~~v~~-~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPl 304 (444)
T KOG2941|consen 227 R-EPQDKALERTAFTKKDASGDVQL-LPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPL 304 (444)
T ss_pred c-ccccchhhhhhHhhhcccchhhh-ccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCch
Confidence 0 00011222333332222111111 12334457777889999999999999984421 247788889999988
Q ss_pred CCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEE--cCC-CCCCcHHHHHHHHcCCc
Q 003985 615 VNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQ--PAF-YEAFGLTVVEAMTCGLP 691 (781)
Q Consensus 615 ~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~--PS~-~E~fGltvlEAMa~GlP 691 (781)
.+++.+.++++++. +|.+.- .+...++...+++ ++|..|+ .|. -=..|++|+.-..||+|
T Consensus 305 ------------kE~Y~~~I~~~~~~-~v~~~t---pWL~aEDYP~ll~-saDlGVcLHtSSSGLDLPMKVVDMFGcglP 367 (444)
T KOG2941|consen 305 ------------KEKYSQEIHEKNLQ-HVQVCT---PWLEAEDYPKLLA-SADLGVCLHTSSSGLDLPMKVVDMFGCGLP 367 (444)
T ss_pred ------------hHHHHHHHHHhccc-ceeeee---cccccccchhHhh-ccccceEeeecCcccCcchhHHHhhcCCCc
Confidence 77888899999885 466654 3677788888888 5997665 333 23479999999999999
Q ss_pred EEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003985 692 TFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 692 VIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~ 759 (781)
|+|-+.....|+|+|++||++++ |.+++|+++..++...-.+.+..+++.+++++. +.+.|+.+
T Consensus 368 vcA~~fkcl~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~--~e~RW~~~ 431 (444)
T KOG2941|consen 368 VCAVNFKCLDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLREE--QELRWDES 431 (444)
T ss_pred eeeecchhHHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH--HhhhHHHH
Confidence 99999999999999999999997 999999999999966666999999999999887 45677654
No 99
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.33 E-value=1.6e-10 Score=132.25 Aligned_cols=308 Identities=14% Similarity=0.124 Sum_probs=174.2
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhh
Q 003985 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (781)
Q Consensus 396 ~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~ 474 (781)
++..+.+.. ..-|+|-.|...-.+++..+.++. ..++.+..|..++.. + .++.+.....-+..|-.
T Consensus 131 FA~~i~~~~-~~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~----e--------~fr~lP~r~eiL~glL~ 197 (474)
T PF00982_consen 131 FADAIAEVY-RPGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPSS----E--------IFRCLPWREEILRGLLG 197 (474)
T ss_dssp HHHHHGGG---TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S----H----H--------HHTTSTTHHHHHHHHTT
T ss_pred HHHHHHHhC-cCCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCCH----H--------HHhhCCcHHHHHHHhhc
Confidence 333444332 367899999999877777777764 688888999765432 1 11222222334557889
Q ss_pred CCEEEecCHHHHhhccccccccccccccccccceeeec-cCCCCC--CceEEecCCCcCCCCCCCcH---HHHHHhhhhc
Q 003985 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVH-GIDVFD--PKFNIVSPGADMDIYFPYSE---KQKRLTALHG 548 (781)
Q Consensus 475 AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~-gi~~f~--~k~~VIpnGvD~~~f~p~~~---~~~rl~~~~~ 548 (781)
||.|-..|+..+..+-+...+.-.. -+.... ++.... -++.+.|-|+|.+.|..... ...+...+
T Consensus 198 aDlIgFqt~~~~~nFl~~~~r~lg~-------~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l-- 268 (474)
T PF00982_consen 198 ADLIGFQTFEYARNFLSCCKRLLGL-------EVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEEL-- 268 (474)
T ss_dssp SSEEEESSHHHHHHHHHHHHHHS-E-------EEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHH--
T ss_pred CCEEEEecHHHHHHHHHHHHHHcCC-------cccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHH--
Confidence 9999999987766443333222100 000000 121112 25667899999876643211 11111111
Q ss_pred chhhhccCccccccccCCCCCCC-CCEEEEEeeccCCCChHHHHHHHHHhhccCC----CeEEEEEeCcCCCCCCcchHH
Q 003985 549 SIEQLLFDPEQNDEHVGTLSDRS-KPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREE 623 (781)
Q Consensus 549 ~i~~~l~~~~~~~~~~g~l~~~~-k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~~~LvIVG~g~~~~~~~d~ee 623 (781)
++.+ .+ ..+|+.+.|++..||+..=+.||.++.+.+| .+.|+-++.... +...++
T Consensus 269 ------------~~~~-----~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr---~~~~~y 328 (474)
T PF00982_consen 269 ------------REKF-----KGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSR---EDVPEY 328 (474)
T ss_dssp ------------HHHT-----TT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-S---TTSHHH
T ss_pred ------------HHhc-----CCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccC---ccchhH
Confidence 1112 23 4899999999999999999999999876655 577887776433 334455
Q ss_pred HHHHHHHHHHHHH----cCCCC--cEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCc----EE
Q 003985 624 IAEIEKMHELMKT----YKLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TF 693 (781)
Q Consensus 624 ~~~~~~l~~li~e----l~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP----VI 693 (781)
++..+++.+++.+ +|-.+ -|.++- ..++.++++.+++ .+|+++.+|..+|..++..|+.+|-.+ +|
T Consensus 329 ~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~---~~~~~~~~~aly~-~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLi 404 (474)
T PF00982_consen 329 QELRREVEELVGRINGKYGTPDWTPIIYIY---RSLSFEELLALYR-AADVALVTSLRDGMNLVAKEYVACQDDNPGVLI 404 (474)
T ss_dssp HHHHHHHHHHHHHHHHHH-BTTB-SEEEE----S---HHHHHHHHH-H-SEEEE--SSBS--HHHHHHHHHS-TS--EEE
T ss_pred HHHHHHHHHHHHHHHhhcccCCceeEEEEe---cCCCHHHHHHHHH-hhhhEEecchhhccCCcceEEEEEecCCCCceE
Confidence 5666677776654 34322 356655 2678999999999 499999999999999999999999765 77
Q ss_pred EcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcC
Q 003985 694 ATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLV 755 (781)
Q Consensus 694 aT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ys 755 (781)
.|...|.++.+.+ ..++|+|.|.+++|++|.+.++ .+++.++...+..++.+ ..+|
T Consensus 405 LSefaGaa~~L~~--~al~VNP~d~~~~A~ai~~AL~---M~~~Er~~r~~~~~~~v-~~~~ 460 (474)
T PF00982_consen 405 LSEFAGAAEQLSE--AALLVNPWDIEEVADAIHEALT---MPPEERKERHARLREYV-REHD 460 (474)
T ss_dssp EETTBGGGGT-TT--S-EEE-TT-HHHHHHHHHHHHT-----HHHHHHHHHHHHHHH-HHT-
T ss_pred eeccCCHHHHcCC--ccEEECCCChHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-HhCC
Confidence 7888888888743 3599999999999999998884 56777777777777777 4444
No 100
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.33 E-value=2.6e-10 Score=129.38 Aligned_cols=322 Identities=12% Similarity=0.055 Sum_probs=209.4
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhh
Q 003985 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (781)
Q Consensus 396 ~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~-~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~ 474 (781)
++..+.+... .-|+|-.|...-.+++..+.++ ...++.+..|..++.. +++. .+.+-..-+..|-.
T Consensus 113 FA~~v~~~~~-~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFPs~----eifr--------~LP~r~eil~glL~ 179 (474)
T PRK10117 113 LADKLLPLLK-DDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPTP----EIFN--------ALPPHDELLEQLCD 179 (474)
T ss_pred HHHHHHHhcC-CCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCCCh----HHHh--------hCCChHHHHHHHHh
Confidence 3334444332 3489999999987887777665 3578888999765432 2111 11111334457888
Q ss_pred CCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHH--HHHHhhhhcchhh
Q 003985 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK--QKRLTALHGSIEQ 552 (781)
Q Consensus 475 AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~--~~rl~~~~~~i~~ 552 (781)
||.|=.-|+.....+-+.+.+..... ...+......|- .-++.+.|-|||.+.|...... ..+...
T Consensus 180 aDlIGFqt~~y~rnFl~~~~~~lg~~--~~~~~~v~~~gr---~v~v~~~PigID~~~~~~~a~~~~~~~~~~------- 247 (474)
T PRK10117 180 YDLLGFQTENDRLAFLDCLSNLTRVT--TRSGKSHTAWGK---AFRTEVYPIGIEPDEIAKQAAGPLPPKLAQ------- 247 (474)
T ss_pred CccceeCCHHHHHHHHHHHHHHcCCc--ccCCCeEEECCe---EEEEEEEECeEcHHHHHHHhhchHHHHHHH-------
Confidence 99999999877654443332211000 001100000110 2256778999998776432111 111111
Q ss_pred hccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCC----CeEEEEEeCcCCCCCCcchHHHHHHH
Q 003985 553 LLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEIAEIE 628 (781)
Q Consensus 553 ~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~~~LvIVG~g~~~~~~~d~ee~~~~~ 628 (781)
.++.+ .++.+|+.+.|+|..||+..=++||+++.+.+| ++.|+-++-. ..+.-+++++...
T Consensus 248 -------lr~~~-----~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~p---sR~~v~~Y~~l~~ 312 (474)
T PRK10117 248 -------LKAEL-----KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT---SRGDVQAYQDIRH 312 (474)
T ss_pred -------HHHHc-----CCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCC---CCCccHHHHHHHH
Confidence 11112 356799999999999999999999999887766 4678777632 3344455566666
Q ss_pred HHHHHHHHc----CCCC--cEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCC-----cEEEcCc
Q 003985 629 KMHELMKTY----KLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-----PTFATCH 697 (781)
Q Consensus 629 ~l~~li~el----~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl-----PVIaT~~ 697 (781)
++.+++.+. |-.+ -|+++- ..++.+++..+|+ +||+++.++..+|+.|+..|+.+|-. +.|.|..
T Consensus 313 ~v~~~vg~INg~fg~~~w~Pv~y~~---~~~~~~~l~alyr-~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSef 388 (474)
T PRK10117 313 QLETEAGRINGKYGQLGWTPLYYLN---QHFDRKLLMKIFR-YSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQF 388 (474)
T ss_pred HHHHHHHHHHhccCCCCceeEEEec---CCCCHHHHHHHHH-hccEEEecccccccccccchheeeecCCCCccEEEecc
Confidence 777776653 2222 134443 4678999999999 59999999999999999999999965 3788998
Q ss_pred cccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003985 698 GGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 698 GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll~ 770 (781)
.|.++.+. ..++|+|.|.+++|++|.+.++ .+++.+++..+..++.+ .+++. ..+++.+-.-+.
T Consensus 389 AGaA~~L~---~AllVNP~d~~~~A~Ai~~AL~---Mp~~Er~~R~~~l~~~v-~~~dv--~~W~~~fL~~L~ 452 (474)
T PRK10117 389 AGAANELT---SALIVNPYDRDEVAAALDRALT---MPLAERISRHAEMLDVI-VKNDI--NHWQECFISDLK 452 (474)
T ss_pred cchHHHhC---CCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-hhCCH--HHHHHHHHHHHH
Confidence 88888883 4899999999999999998884 66777777777777777 44443 444455544443
No 101
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.25 E-value=2.7e-11 Score=107.74 Aligned_cols=86 Identities=24% Similarity=0.440 Sum_probs=80.5
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 003985 668 AFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGL 747 (781)
Q Consensus 668 vfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~ 747 (781)
+++.|+...++++.++|+||||+|||+++.++..+++.+|..++.++ |+++++++|..++ +||+.+++++++|+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll----~~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLL----ENPEERRRIAKNAR 74 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHH----CCHHHHHHHHHHHH
Confidence 46778889999999999999999999999999999999999999998 9999999998877 89999999999999
Q ss_pred HHHHHhcCcchh
Q 003985 748 KRIYERLVVSSD 759 (781)
Q Consensus 748 ~~v~~~ysw~~~ 759 (781)
+++.++|||+..
T Consensus 75 ~~v~~~~t~~~~ 86 (92)
T PF13524_consen 75 ERVLKRHTWEHR 86 (92)
T ss_pred HHHHHhCCHHHH
Confidence 999999999764
No 102
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.25 E-value=3.2e-11 Score=117.53 Aligned_cols=165 Identities=16% Similarity=0.195 Sum_probs=85.9
Q ss_pred CCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCCCCeEEEE-eccCCCccccc
Q 003985 299 PDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILR-VPFRSEKGILR 377 (781)
Q Consensus 299 p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~~~~~I~r-vP~~~~~~~~~ 377 (781)
+..||.++++. +|+++|+++||+|+ |+|....+..... ...... .+....
T Consensus 9 ~~~GG~e~~~~--------~l~~~l~~~G~~v~----v~~~~~~~~~~~~------------~~~~~~~~~~~~~----- 59 (177)
T PF13439_consen 9 PNIGGAERVVL--------NLARALAKRGHEVT----VVSPGVKDPIEEE------------LVKIFVKIPYPIR----- 59 (177)
T ss_dssp TSSSHHHHHHH--------HHHHHHHHTT-EEE----EEESS-TTS-SST------------EEEE---TT-SST-----
T ss_pred CCCChHHHHHH--------HHHHHHHHCCCEEE----EEEcCCCccchhh------------ccceeeeeecccc-----
Confidence 46899999999 77778899999999 9977754432111 011111 111110
Q ss_pred ccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccc--cCCCChhhHhhh
Q 003985 378 QWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKT--KYPDSDIYWKKF 455 (781)
Q Consensus 378 ~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~--k~~~s~~~~k~~ 455 (781)
....+.......+.+.+.+. +|||||+|.+.....+....+ ++|.|.+.|+.... ...........+
T Consensus 60 ------~~~~~~~~~~~~~~~~i~~~---~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~~~~~~~~~~~~~~ 128 (177)
T PF13439_consen 60 ------KRFLRSFFFMRRLRRLIKKE---KPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFERRFLKSKLSPYSYL 128 (177)
T ss_dssp ------SS--HHHHHHHHHHHHHHHH---T-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--HHTTTTSCCCHHHH
T ss_pred ------cccchhHHHHHHHHHHHHHc---CCCeEEecccchhHHHHHhcc--CCCEEEEeCCCcccccccccccchhhhh
Confidence 01111112233444555554 899999998766444444444 99999999986521 100000000000
Q ss_pred hccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCC
Q 003985 456 DEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIY 533 (781)
Q Consensus 456 ~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f 533 (781)
. . .......+.+|.+|++|...++.+.+ .|++ ..|+.|||||+|.+.|
T Consensus 129 ~-------~-~~~~~~~~~~~~ii~vS~~~~~~l~~--------------------~~~~--~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 129 N-------F-RIERKLYKKADRIIAVSESTKDELIK--------------------FGIP--PEKIHVIYNGIDTDRF 176 (177)
T ss_dssp H-------H-CTTHHHHCCSSEEEESSHHHHHHHHH--------------------HT----SS-EEE----B-CCCH
T ss_pred h-------h-hhhhhHHhcCCEEEEECHHHHHHHHH--------------------hCCc--ccCCEEEECCccHHHc
Confidence 0 0 11223478999999999988763322 2443 6899999999999877
No 103
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.24 E-value=1.6e-11 Score=117.69 Aligned_cols=160 Identities=19% Similarity=0.272 Sum_probs=85.1
Q ss_pred ccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCccccccccc
Q 003985 302 GGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWIS 381 (781)
Q Consensus 302 GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvP~~~~~~~~~~~is 381 (781)
||.+.|+. +|+++|.++||+|+ |+|...++.. .... ..++.+.++|........
T Consensus 1 GG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~~~----- 54 (160)
T PF13579_consen 1 GGIERYVR--------ELARALAARGHEVT----VVTPQPDPED------DEEE---EDGVRVHRLPLPRRPWPL----- 54 (160)
T ss_dssp SHHHHHHH--------HHHHHHHHTT-EEE----EEEE---GGG-------SEE---ETTEEEEEE--S-SSSGG-----
T ss_pred CCHHHHHH--------HHHHHHHHCCCEEE----EEecCCCCcc------cccc---cCCceEEeccCCccchhh-----
Confidence 79999999 77778899999999 9987644321 1111 236888898877642111
Q ss_pred ccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccccc
Q 003985 382 RFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHF 461 (781)
Q Consensus 382 r~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f 461 (781)
..+. +...+.+.+ .....+||+||+|++..++++.++++..++|+|++.|+...... . .|. ...+
T Consensus 55 --~~~~----~~~~~~~~l-~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~--~--~~~--~~~~-- 119 (160)
T PF13579_consen 55 --RLLR----FLRRLRRLL-AARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRRG--S--RWK--RRLY-- 119 (160)
T ss_dssp --GHCC----HHHHHHHHC-HHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------HH--HHHH--
T ss_pred --hhHH----HHHHHHHHH-hhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhhc--c--chh--hHHH--
Confidence 0111 112222222 22356999999999766777777776889999999997542211 1 111 1111
Q ss_pred hhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCC
Q 003985 462 SCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG 527 (781)
Q Consensus 462 ~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnG 527 (781)
...+...++.||.|+++|+...+.+.+ .|++ .+|+.|||||
T Consensus 120 ---~~~~~~~~~~ad~vi~~S~~~~~~l~~--------------------~g~~--~~ri~vipnG 160 (160)
T PF13579_consen 120 ---RWLERRLLRRADRVIVVSEAMRRYLRR--------------------YGVP--PDRIHVIPNG 160 (160)
T ss_dssp ---HHHHHHHHHH-SEEEESSHHHHHHHHH--------------------H-----GGGEEE----
T ss_pred ---HHHHHHHHhcCCEEEECCHHHHHHHHH--------------------hCCC--CCcEEEeCcC
Confidence 123567899999999999988763221 2433 7899999998
No 104
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.23 E-value=8.3e-09 Score=114.64 Aligned_cols=301 Identities=15% Similarity=0.104 Sum_probs=162.8
Q ss_pred cccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccc
Q 003985 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWI 380 (781)
Q Consensus 301 ~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvP~~~~~~~~~~~i 380 (781)
|||-..-.+ .+++.|.++||+|. ++++...-. .+-++. .+..+..++....
T Consensus 11 TGGHi~Pal--------a~a~~l~~~g~~v~----~vg~~~~~e--------~~l~~~-~g~~~~~~~~~~l-------- 61 (352)
T PRK12446 11 SAGHVTPNL--------AIIPYLKEDNWDIS----YIGSHQGIE--------KTIIEK-ENIPYYSISSGKL-------- 61 (352)
T ss_pred cHHHHHHHH--------HHHHHHHhCCCEEE----EEECCCccc--------cccCcc-cCCcEEEEeccCc--------
Confidence 678665555 67788888999998 887553211 011111 1344444443221
Q ss_pred cccCch---hhHHHHHH---HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhh
Q 003985 381 SRFDVW---PYLETFTE---DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKK 454 (781)
Q Consensus 381 sr~~i~---~yl~~f~~---~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~ 454 (781)
++...+ .....+.. .+.+.++ ..+||+||++....+..+.++++.+++|+++.-.+... .
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~------g----- 127 (352)
T PRK12446 62 RRYFDLKNIKDPFLVMKGVMDAYVRIR---KLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTP------G----- 127 (352)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHH---hcCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCc------c-----
Confidence 111111 11111111 2222333 44999999987777777889999999998653221100 0
Q ss_pred hhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCC
Q 003985 455 FDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYF 534 (781)
Q Consensus 455 ~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~ 534 (781)
.+.++....||.|.++-+.... +++ ..|+.++-|.+..+...
T Consensus 128 -----------~~nr~~~~~a~~v~~~f~~~~~-------------------------~~~--~~k~~~tG~Pvr~~~~~ 169 (352)
T PRK12446 128 -----------LANKIALRFASKIFVTFEEAAK-------------------------HLP--KEKVIYTGSPVREEVLK 169 (352)
T ss_pred -----------HHHHHHHHhhCEEEEEccchhh-------------------------hCC--CCCeEEECCcCCccccc
Confidence 1223566778888665432211 111 35677776666554432
Q ss_pred CCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEee-ccCCCChHHH-HHHHHHhhccCCCeEEEEEeCc
Q 003985 535 PYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMAR-LDHVKNMTGL-VECYGKNSQLRELVNLVVVAGY 612 (781)
Q Consensus 535 p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGR-L~~~Kgl~~L-ieA~~~l~~~~~~~~LvIVG~g 612 (781)
+..... +..+|+ ++++++|+.+|. .. .+.+..+ .+++..+. .+++++++.|.
T Consensus 170 ~~~~~~--------------------~~~~~l--~~~~~~iLv~GGS~G-a~~in~~~~~~l~~l~---~~~~vv~~~G~ 223 (352)
T PRK12446 170 GNREKG--------------------LAFLGF--SRKKPVITIMGGSLG-AKKINETVREALPELL---LKYQIVHLCGK 223 (352)
T ss_pred ccchHH--------------------HHhcCC--CCCCcEEEEECCccc-hHHHHHHHHHHHHhhc---cCcEEEEEeCC
Confidence 221111 123554 456777666644 44 3445333 33444443 24776666554
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcE
Q 003985 613 IDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPT 692 (781)
Q Consensus 613 ~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPV 692 (781)
.+ +.+...++ .++...++. .+++..+|+ .+|++|.=+ -+.|+.|++++|+|.
T Consensus 224 ~~---------------~~~~~~~~---~~~~~~~f~-----~~~m~~~~~-~adlvIsr~----G~~t~~E~~~~g~P~ 275 (352)
T PRK12446 224 GN---------------LDDSLQNK---EGYRQFEYV-----HGELPDILA-ITDFVISRA----GSNAIFEFLTLQKPM 275 (352)
T ss_pred ch---------------HHHHHhhc---CCcEEecch-----hhhHHHHHH-hCCEEEECC----ChhHHHHHHHcCCCE
Confidence 22 11111111 133444532 235778888 499888864 378999999999999
Q ss_pred EEcCcc---------ccccccccCCeEEEECCC--CHHHHHHHHHHHHHhccCCHHHHH
Q 003985 693 FATCHG---------GPAEIIEHGASGFHIDPY--HPDQAAELMADFFGKCKENPSHWK 740 (781)
Q Consensus 693 IaT~~G---------G~~EiI~dg~~G~lv~p~--d~e~lA~~I~~~l~~l~~dp~~~~ 740 (781)
|..... ..++.+.+...|..+... +++.+++.|.+++ .|++.++
T Consensus 276 I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll----~~~~~~~ 330 (352)
T PRK12446 276 LLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELS----HNNEKYK 330 (352)
T ss_pred EEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHH----cCHHHHH
Confidence 987432 122344455566666432 5678888887766 7876543
No 105
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.22 E-value=1.7e-08 Score=111.80 Aligned_cols=311 Identities=15% Similarity=0.158 Sum_probs=182.8
Q ss_pred cccceeehHHHHHHHHHHHHHHHHHCCCc-eeeceeEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCccccccc
Q 003985 301 TGGQVVYILDQVRALENEMLLRIKRQGLD-ISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQW 379 (781)
Q Consensus 301 ~GG~~vyvld~araL~~eLa~~L~~~Ghe-V~~~v~VlT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvP~~~~~~~~~~~ 379 (781)
|||-..-.+ .+++.|.++|++ |. ++..... ..+......+..+..++.....
T Consensus 10 TGGHv~pAl--------Al~~~l~~~g~~~v~----~~~~~~~---------~e~~l~~~~~~~~~~I~~~~~~------ 62 (357)
T COG0707 10 TGGHVFPAL--------ALAEELAKRGWEQVI----VLGTGDG---------LEAFLVKQYGIEFELIPSGGLR------ 62 (357)
T ss_pred CccchhHHH--------HHHHHHHhhCccEEE----Eeccccc---------ceeeeccccCceEEEEeccccc------
Confidence 566555444 678889999997 33 4422211 1111112225666666665432
Q ss_pred ccccCchh------hHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHh
Q 003985 380 ISRFDVWP------YLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWK 453 (781)
Q Consensus 380 isr~~i~~------yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k 453 (781)
+...+. ++......+.+.+++ .+||+|++........+.++++.+|+|+++.-.+... ...|+
T Consensus 63 --~~~~~~~~~~~~~~~~~~~~a~~il~~---~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~------G~ank 131 (357)
T COG0707 63 --RKGSLKLLKAPFKLLKGVLQARKILKK---LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVP------GLANK 131 (357)
T ss_pred --ccCcHHHHHHHHHHHHHHHHHHHHHHH---cCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCc------chhHH
Confidence 112222 111222233334443 4999999988888888889999999999876544322 22333
Q ss_pred hhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCC
Q 003985 454 KFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIY 533 (781)
Q Consensus 454 ~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f 533 (781)
+..+.|+.|.+.-... . . +.+ +.++.++-|.+..+..
T Consensus 132 ----------------~~~~~a~~V~~~f~~~-~-------~-----------------~~~--~~~~~~tG~Pvr~~~~ 168 (357)
T COG0707 132 ----------------ILSKFAKKVASAFPKL-E-------A-----------------GVK--PENVVVTGIPVRPEFE 168 (357)
T ss_pred ----------------HhHHhhceeeeccccc-c-------c-----------------cCC--CCceEEecCcccHHhh
Confidence 2344566554433211 0 0 122 4567788777776555
Q ss_pred CCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEe-eccCCCChHHHHH-HHHHhhccCCCeEEEEEeC
Q 003985 534 FPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMA-RLDHVKNMTGLVE-CYGKNSQLRELVNLVVVAG 611 (781)
Q Consensus 534 ~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vG-RL~~~Kgl~~Lie-A~~~l~~~~~~~~LvIVG~ 611 (781)
. ......+. .+ ..++++|+.+| ..+..+ +..++. +...+.+ +++++..++
T Consensus 169 ~-~~~~~~~~--------------------~~---~~~~~~ilV~GGS~Ga~~-ln~~v~~~~~~l~~---~~~v~~~~G 220 (357)
T COG0707 169 E-LPAAEVRK--------------------DG---RLDKKTILVTGGSQGAKA-LNDLVPEALAKLAN---RIQVIHQTG 220 (357)
T ss_pred c-cchhhhhh--------------------hc---cCCCcEEEEECCcchhHH-HHHHHHHHHHHhhh---CeEEEEEcC
Confidence 4 22222111 11 12566666665 444444 444443 3334433 567666665
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCc
Q 003985 612 YIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP 691 (781)
Q Consensus 612 g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP 691 (781)
... .++++..-.+++. ++..++.. ++..+|+. +|+.|.=+ -++|+-|..++|+|
T Consensus 221 ~~~------------~~~~~~~~~~~~~---~~v~~f~~------dm~~~~~~-ADLvIsRa----Ga~Ti~E~~a~g~P 274 (357)
T COG0707 221 KND------------LEELKSAYNELGV---VRVLPFID------DMAALLAA-ADLVISRA----GALTIAELLALGVP 274 (357)
T ss_pred cch------------HHHHHHHHhhcCc---EEEeeHHh------hHHHHHHh-ccEEEeCC----cccHHHHHHHhCCC
Confidence 532 3455555555544 77777544 47888884 99998864 37999999999999
Q ss_pred EEEcCccc--------cccccccCCeEEEECCCC--HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 003985 692 TFATCHGG--------PAEIIEHGASGFHIDPYH--PDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (781)
Q Consensus 692 VIaT~~GG--------~~EiI~dg~~G~lv~p~d--~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v 750 (781)
+|--..+. .+..+++...|..++-.+ ++.+++.|.+++ .+|+..++|++++++..
T Consensus 275 ~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~----~~~~~l~~m~~~a~~~~ 339 (357)
T COG0707 275 AILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLL----SNPEKLKAMAENAKKLG 339 (357)
T ss_pred EEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHh----cCHHHHHHHHHHHHhcC
Confidence 99874332 334455666777776444 778888888777 88999999999987765
No 106
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.21 E-value=2.1e-09 Score=130.85 Aligned_cols=312 Identities=13% Similarity=0.108 Sum_probs=203.5
Q ss_pred HHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHH
Q 003985 394 EDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAM 472 (781)
Q Consensus 394 ~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~ 472 (781)
+.++..+.+.....-|+|..|.+.-.+++..+.++. ..++.+..|..++.. .+ |+.+.+...-+..|
T Consensus 188 ~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~----ei--------fr~LP~r~eiL~gl 255 (854)
T PLN02205 188 KIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS----EI--------YKTLPIREELLRAL 255 (854)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCCh----HH--------HhhCCcHHHHHHHH
Confidence 334444444432223899999999888887777664 578889999765532 22 22222223445678
Q ss_pred hhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC--ceEEecCCCcCCCCCCC---cHHHHHHhhhh
Q 003985 473 NNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMDIYFPY---SEKQKRLTALH 547 (781)
Q Consensus 473 ~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~--k~~VIpnGvD~~~f~p~---~~~~~rl~~~~ 547 (781)
-.||.|=..|+..+..+.....+...... ...+ ...++.+... ++.+.|-|||...|... ++...+...+
T Consensus 256 L~aDlIGFht~~yar~Fl~~~~r~lgl~~-~~~~---g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l- 330 (854)
T PLN02205 256 LNSDLIGFHTFDYARHFLSCCSRMLGLSY-ESKR---GYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKEL- 330 (854)
T ss_pred hcCCeEEecCHHHHHHHHHHHHHHhCCcc-cCCC---cceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHH-
Confidence 89999999998776644433222111000 0000 0012222223 56678999998776432 1112222111
Q ss_pred cchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCe----EEEEEeCcCCCCCCcchHH
Q 003985 548 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELV----NLVVVAGYIDVNKSKDREE 623 (781)
Q Consensus 548 ~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~----~LvIVG~g~~~~~~~d~ee 623 (781)
+++++ .+++.+|+.+.|+|..||+..=+.||+++.+.+|.+ .|+-+.--. .+.-+++
T Consensus 331 -------------~~~~~---~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~ps---r~~~~~y 391 (854)
T PLN02205 331 -------------IKQFC---DQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPA---RGKGKDV 391 (854)
T ss_pred -------------HHHhc---cCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCC---CcccHHH
Confidence 11222 236789999999999999999999999998877754 677666432 2333455
Q ss_pred HHHHHHHHHHHHHc----CCCC--cEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCC-------
Q 003985 624 IAEIEKMHELMKTY----KLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL------- 690 (781)
Q Consensus 624 ~~~~~~l~~li~el----~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl------- 690 (781)
++...++.+++.+. |-.+ -|+++- ..++.+++..+|+ .||+++.++..+|+.|+..|+.+|..
T Consensus 392 ~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~---~~~~~~e~~aly~-~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~ 467 (854)
T PLN02205 392 KEVQAETHSTVKRINETFGKPGYDPIVLID---APLKFYERVAYYV-VAECCLVTAVRDGMNLIPYEYIISRQGNEKLDK 467 (854)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCceEEEEe---cCCCHHHHHHHHH-hccEEEeccccccccccchheeEEccCcccccc
Confidence 56666666766653 3222 356654 3678999999999 59999999999999999999999854
Q ss_pred ------------cEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 003985 691 ------------PTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 751 (781)
Q Consensus 691 ------------PVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~ 751 (781)
..|.|...|.+..+. ..++|+|.|.+++|++|.+.+. .+++.++..-+..++++.
T Consensus 468 ~~~~~~~~~~~gvLiLSEfaGaa~~L~---~Ai~VNP~d~~~~a~ai~~AL~---m~~~Er~~R~~~~~~~v~ 534 (854)
T PLN02205 468 LLGLEPSTPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIDAVADAMDSALE---MAEPEKQLRHEKHYRYVS 534 (854)
T ss_pred ccccccccCCCCceEeeeccchhHHhC---cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHh
Confidence 367788878777662 4799999999999999998884 556666665666666663
No 107
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.17 E-value=7.2e-09 Score=117.32 Aligned_cols=307 Identities=14% Similarity=0.114 Sum_probs=199.2
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhh
Q 003985 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (781)
Q Consensus 396 ~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~ 474 (781)
....+.+..+ .-|+|..|...-.+++..+..+. ..++.+..|..++.. .+ ++-+.+...-...+-.
T Consensus 137 FAd~i~~~~~-~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPss----Ev--------fr~lP~r~eIl~gll~ 203 (486)
T COG0380 137 FADKIVEIYE-PGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSS----EV--------FRCLPWREEILEGLLG 203 (486)
T ss_pred HHHHHHHhcC-CCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCCH----HH--------HhhCchHHHHHHHhhc
Confidence 3334444332 34999999999878777777665 467788889766543 21 1111222333456788
Q ss_pred CCEEEecCHHHHhhccccccccccccccccccceeeecc-CCCCCCceEEecCCCcCCCCCCCcHHH---HHHhhhhcch
Q 003985 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHG-IDVFDPKFNIVSPGADMDIYFPYSEKQ---KRLTALHGSI 550 (781)
Q Consensus 475 AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~g-i~~f~~k~~VIpnGvD~~~f~p~~~~~---~rl~~~~~~i 550 (781)
||+|=..|+..+..+.+...+... ++ +.-.+.++ .+--..++..+|=|+|...|....... .+... +
T Consensus 204 ~dligFqt~~y~~nF~~~~~r~~~---~~--~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~e----l 274 (486)
T COG0380 204 ADLIGFQTESYARNFLDLCSRLLG---VT--GDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLE----L 274 (486)
T ss_pred CCeeEecCHHHHHHHHHHHHHhcc---cc--ccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHH----H
Confidence 999999998776654444332210 00 00001111 110023556689999987664322111 11111 1
Q ss_pred hhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCC----CeEEEEEeCcCCCCCCcchHHHHH
Q 003985 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEIAE 626 (781)
Q Consensus 551 ~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~~~LvIVG~g~~~~~~~d~ee~~~ 626 (781)
. +.+ ..++.+|+.+.|+|..||+..=+.||.++...+| .+.|+-++.... ..-++++..
T Consensus 275 ~----------~~~----~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr---~~v~~y~~~ 337 (486)
T COG0380 275 K----------AEL----GRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSR---EDVEEYQAL 337 (486)
T ss_pred H----------HHh----cCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCc---cccHHHHHH
Confidence 1 111 2348899999999999999999999999987665 567777776544 222333445
Q ss_pred HHHHHHHHHHcC-CCCc-----EEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcC----CcEEEcC
Q 003985 627 IEKMHELMKTYK-LDGQ-----FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCG----LPTFATC 696 (781)
Q Consensus 627 ~~~l~~li~el~-L~~~-----V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~G----lPVIaT~ 696 (781)
..++.+++.+.+ .-+. |.++- ..++..+++.++. .+|+++..++.+|+.++..|+.+|- =|.|-|.
T Consensus 338 ~~~i~~~V~rIN~~fG~~~~~Pv~~l~---~~~~~~~l~al~~-~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSe 413 (486)
T COG0380 338 RLQIEELVGRINGEFGSLSWTPVHYLH---RDLDRNELLALYR-AADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSE 413 (486)
T ss_pred HHHHHHHHHHHHhhcCCCCcceeEEEe---ccCCHHHHHHHHh-hhceeeeccccccccHHHHHHHHhhcCCCCcEEEec
Confidence 555555555432 2233 44443 3578899999999 5999999999999999999999984 4788888
Q ss_pred ccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 003985 697 HGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 751 (781)
Q Consensus 697 ~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~ 751 (781)
..|.+..+.+ .++++|.|.+++|++|.+.+. .+++.+++.-+..++.+.
T Consensus 414 FaGaa~~L~~---AliVNP~d~~~va~ai~~AL~---m~~eEr~~r~~~~~~~v~ 462 (486)
T COG0380 414 FAGAASELRD---ALIVNPWDTKEVADAIKRALT---MSLEERKERHEKLLKQVL 462 (486)
T ss_pred cccchhhhcc---CEeECCCChHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHH
Confidence 8888887743 899999999999999998875 677777776666777763
No 108
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=99.07 E-value=2.3e-08 Score=113.75 Aligned_cols=135 Identities=13% Similarity=0.133 Sum_probs=107.7
Q ss_pred HHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCc
Q 003985 588 TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKG 667 (781)
Q Consensus 588 ~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aad 667 (781)
+..+++++++.+..|+++|.| |.+.+ ...+|.++ +++ ++.+.+.|+.+ ..+-.++. .||
T Consensus 291 s~~I~~i~~Lv~~lPd~~f~I-ga~te-----------~s~kL~~L-~~y--~nvvly~~~~~-----~~l~~ly~-~~d 349 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYHFHI-AALTE-----------MSSKLMSL-DKY--DNVKLYPNITT-----QKIQELYQ-TCD 349 (438)
T ss_pred HHHHHHHHHHHHhCCCcEEEE-EecCc-----------ccHHHHHH-Hhc--CCcEEECCcCh-----HHHHHHHH-hcc
Confidence 899999999999999999999 65543 13577777 777 56666776433 24556666 599
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEcC-ccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 003985 668 AFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGG 746 (781)
Q Consensus 668 vfV~PS~~E~fGltvlEAMa~GlPVIaT~-~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a 746 (781)
+++-.|..|+|++++.|||+.|+||++.+ .-|+.+++.+ |.+++.+|+++++++|.+++ .||+.+++.-..=
T Consensus 350 lyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL----~d~~~~~~~~~~q 422 (438)
T TIGR02919 350 IYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLL----NDPNQFRELLEQQ 422 (438)
T ss_pred EEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHh----cCHHHHHHHHHHH
Confidence 99999999999999999999999999985 4467788865 88999999999999999887 8998777655444
Q ss_pred HHHH
Q 003985 747 LKRI 750 (781)
Q Consensus 747 ~~~v 750 (781)
++.+
T Consensus 423 ~~~a 426 (438)
T TIGR02919 423 REHA 426 (438)
T ss_pred HHHh
Confidence 4443
No 109
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=98.99 E-value=1.2e-08 Score=102.38 Aligned_cols=177 Identities=20% Similarity=0.211 Sum_probs=116.7
Q ss_pred ceEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeec
Q 003985 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVS 357 (781)
Q Consensus 278 ~~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~ 357 (781)
|.||+|+...|.|.. .||.|+.+. +|+.+|+++||+|+ |.|+...... . ..
T Consensus 1 mkkIaIiGtrGIPa~--------YGGfET~ve--------~L~~~l~~~g~~v~----Vyc~~~~~~~------~---~~ 51 (185)
T PF09314_consen 1 MKKIAIIGTRGIPAR--------YGGFETFVE--------ELAPRLVSKGIDVT----VYCRSDYYPY------K---EF 51 (185)
T ss_pred CceEEEEeCCCCCcc--------cCcHHHHHH--------HHHHHHhcCCceEE----EEEccCCCCC------C---Cc
Confidence 458999999999853 699999999 88899999999999 9998732211 1 12
Q ss_pred CCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHH-----cCCCceEEEEcCCC-chHHHHHHHHH--c
Q 003985 358 GTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAE-----LQGFPDFIIGNYSD-GNLVASLLAYK--M 429 (781)
Q Consensus 358 ~~~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~-----l~~~pDIIh~~~~~-~~lva~llar~--~ 429 (781)
...++++..+|.....+ +.++.-++...+.+. -+.+.|+|+.+... ++++..++.+. .
T Consensus 52 ~y~gv~l~~i~~~~~g~--------------~~si~yd~~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~ 117 (185)
T PF09314_consen 52 EYNGVRLVYIPAPKNGS--------------AESIIYDFLSLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKK 117 (185)
T ss_pred ccCCeEEEEeCCCCCCc--------------hHHHHHHHHHHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhc
Confidence 23478999998775321 112112221111111 02357899987766 45555555443 4
Q ss_pred CCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhcccccccccccccccccccee
Q 003985 430 GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYR 509 (781)
Q Consensus 430 gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~ 509 (781)
|.|+++..|++++.+ .+|..+...|- ...|..+.+.||.+|+-|....+..++. |
T Consensus 118 g~~v~vN~DGlEWkR-----~KW~~~~k~~l----k~~E~~avk~ad~lIaDs~~I~~y~~~~---y------------- 172 (185)
T PF09314_consen 118 GGKVVVNMDGLEWKR-----AKWGRPAKKYL----KFSEKLAVKYADRLIADSKGIQDYIKER---Y------------- 172 (185)
T ss_pred CCcEEECCCcchhhh-----hhcCHHHHHHH----HHHHHHHHHhCCEEEEcCHHHHHHHHHH---c-------------
Confidence 779999999998754 35555544432 1457789999999999998765532222 1
Q ss_pred eeccCCCCCCceEEecCCCc
Q 003985 510 VVHGIDVFDPKFNIVSPGAD 529 (781)
Q Consensus 510 v~~gi~~f~~k~~VIpnGvD 529 (781)
+ .++..+|++|.|
T Consensus 173 ---~----~~~s~~IaYGad 185 (185)
T PF09314_consen 173 ---G----RKKSTFIAYGAD 185 (185)
T ss_pred ---C----CCCcEEecCCCC
Confidence 1 378899999987
No 110
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=98.95 E-value=9.6e-08 Score=107.37 Aligned_cols=123 Identities=15% Similarity=0.052 Sum_probs=81.8
Q ss_pred CCCCEEEEEeeccC---CCChHHHHHHHHHhhccCCCeEEE-EEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003985 570 RSKPIVFSMARLDH---VKNMTGLVECYGKNSQLRELVNLV-VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (781)
Q Consensus 570 ~~k~iIl~vGRL~~---~Kgl~~LieA~~~l~~~~~~~~Lv-IVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~f 645 (781)
.+.+++++.|+... .+-...+++++... +.+++ .+|.... . . ..+.++|.+
T Consensus 238 ~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~------------~-~-------~~~~~~v~~ 292 (401)
T cd03784 238 GRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGL------------G-A-------EDLPDNVRV 292 (401)
T ss_pred CCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCccc------------c-c-------cCCCCceEE
Confidence 44567788888754 33445556666543 34444 4444432 0 0 245688999
Q ss_pred eccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCCeEEEECCC--CHH
Q 003985 646 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHIDPY--HPD 719 (781)
Q Consensus 646 lG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG----~~EiI~dg~~G~lv~p~--d~e 719 (781)
.+ .++..+++ . .+|++|+- |-..|+.||+++|+|+|.....+ .++.++..+.|..+++. +.+
T Consensus 293 ~~----~~p~~~ll---~-~~d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~ 360 (401)
T cd03784 293 VD----FVPHDWLL---P-RCAAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAE 360 (401)
T ss_pred eC----CCCHHHHh---h-hhheeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHH
Confidence 98 45555554 4 59999965 23589999999999999985554 35556666678887765 688
Q ss_pred HHHHHHHHHH
Q 003985 720 QAAELMADFF 729 (781)
Q Consensus 720 ~lA~~I~~~l 729 (781)
++++++.+++
T Consensus 361 ~l~~al~~~l 370 (401)
T cd03784 361 RLAAALRRLL 370 (401)
T ss_pred HHHHHHHHHh
Confidence 8898888776
No 111
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=98.84 E-value=1.1e-08 Score=107.88 Aligned_cols=183 Identities=15% Similarity=0.114 Sum_probs=100.7
Q ss_pred EEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCcc-Ccceeeec-
Q 003985 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTC-NQRLERVS- 357 (781)
Q Consensus 280 rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~-~~~~e~v~- 357 (781)
||++||.-..| .-.+||...++- .|+++|+++||+|. |+++.+........ ...+....
T Consensus 1 kIl~vt~E~~P-------~~k~GGLgdv~~--------~L~kaL~~~G~~V~----Vi~P~y~~~~~~~~~~~~~~~~~~ 61 (245)
T PF08323_consen 1 KILMVTSEYAP-------FAKVGGLGDVVG--------SLPKALAKQGHDVR----VIMPKYGFIDEEYFQLEPVRRLSV 61 (245)
T ss_dssp EEEEE-S-BTT-------TB-SSHHHHHHH--------HHHHHHHHTT-EEE----EEEE-THHHHHHCTTEEEEEEES-
T ss_pred CEEEEEcccCc-------ccccCcHhHHHH--------HHHHHHHhcCCeEE----EEEccchhhhhhhhcceEEEEecc
Confidence 79999986653 136899999988 67777899999999 99887532111100 00000000
Q ss_pred -------------------CCCCeEEEEeccCCCcccccccccccCch-------h-hHH---HHHHHHHHHHHHHcCCC
Q 003985 358 -------------------GTEHTHILRVPFRSEKGILRQWISRFDVW-------P-YLE---TFTEDVGSEITAELQGF 407 (781)
Q Consensus 358 -------------------~~~~~~I~rvP~~~~~~~~~~~isr~~i~-------~-yl~---~f~~~~~~~i~~~l~~~ 407 (781)
...++.++.+.... +.+|..++ + -.. .|+..+...+. .+..+
T Consensus 62 ~~~~~v~~~~~~~~~v~~~~~~~v~v~~i~~~~-------~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le~~~-~l~~~ 133 (245)
T PF08323_consen 62 PFGGPVPVGVWYEVRVYRYPVDGVPVYFIDNPE-------YFDRPGIYGDNGGDYPDNAERFAFFSRAALELLK-KLGWK 133 (245)
T ss_dssp STTCEEEEE----EEEEEEEETTEEEEEEESHH-------HHGSSSSSBSTSSBHTTHHHHHHHHHHHHHHHHC-TCT-S
T ss_pred ccccccccccceEEEEEEEEcCCccEEEecChh-------hccccceeccCCCcchhHHHHHHHHHHHHHHHHH-hhCCC
Confidence 01244444442221 12222232 1 122 33333333332 23468
Q ss_pred ceEEEEcCCCchHHHHHHHHHc-------CCcEEEEecCCccccCCCC------hhhHhh--hhccccchhhhhHHHHHH
Q 003985 408 PDFIIGNYSDGNLVASLLAYKM-------GITQCTIAHALEKTKYPDS------DIYWKK--FDEKYHFSCQFTADLIAM 472 (781)
Q Consensus 408 pDIIh~~~~~~~lva~llar~~-------gvp~v~t~H~l~~~k~~~s------~~~~k~--~~~~y~f~~~~~~e~~a~ 472 (781)
|||||+|.|.+++++.+++... ++|+|+|+|++..+..... .+.+.. ....+.+...+...+.++
T Consensus 134 pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi 213 (245)
T PF08323_consen 134 PDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGI 213 (245)
T ss_dssp -SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHH
T ss_pred CCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHH
Confidence 9999999999999999998876 5999999999765432211 112111 111233334445566889
Q ss_pred hhCCEEEecCHHHHhhc
Q 003985 473 NNADFIITSTYQEIAGT 489 (781)
Q Consensus 473 ~~AD~IIt~S~~~~~~~ 489 (781)
..||.|+|+|+..++.+
T Consensus 214 ~~AD~v~TVS~~Ya~Ei 230 (245)
T PF08323_consen 214 VYADKVTTVSPTYAREI 230 (245)
T ss_dssp HHSSEEEESSHHHHHHT
T ss_pred HhcCEeeeCCHHHHHHH
Confidence 99999999999887643
No 112
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.81 E-value=4.2e-07 Score=98.86 Aligned_cols=116 Identities=16% Similarity=0.214 Sum_probs=80.6
Q ss_pred CCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 003985 570 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (781)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~ 649 (781)
+.+.+++++|..+.. .++++++.+ ++..++++|.... + .-.++|++.++.
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~----~~~~~~v~g~~~~--------------------~--~~~~ni~~~~~~ 240 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKAL----PDYQFIVFGPNAA--------------------D--PRPGNIHVRPFS 240 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhC----CCCeEEEEcCCcc--------------------c--ccCCCEEEeecC
Confidence 355688999987765 667777664 4688888876632 0 015789988743
Q ss_pred cCcCChHHHHHHHHccCcEEEEcCCCCCCcHH-HHHHHHcCCcEEEcCcccccc------ccccCCeEEEECCC--CHHH
Q 003985 650 TNRARNGELYRYIADTKGAFVQPAFYEAFGLT-VVEAMTCGLPTFATCHGGPAE------IIEHGASGFHIDPY--HPDQ 720 (781)
Q Consensus 650 ~~~v~~~el~~~la~aadvfV~PS~~E~fGlt-vlEAMa~GlPVIaT~~GG~~E------iI~dg~~G~lv~p~--d~e~ 720 (781)
..++.++++. ||++|.-+ |.+ +.||+++|+|++.-...+..| .++..+.|..+++. +++.
T Consensus 241 -----~~~~~~~m~~-ad~vIs~~-----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~ 309 (318)
T PF13528_consen 241 -----TPDFAELMAA-ADLVISKG-----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPER 309 (318)
T ss_pred -----hHHHHHHHHh-CCEEEECC-----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHH
Confidence 3578899995 99999874 554 999999999999986655333 34455567776533 5677
Q ss_pred HHHHHH
Q 003985 721 AAELMA 726 (781)
Q Consensus 721 lA~~I~ 726 (781)
+++.|.
T Consensus 310 l~~~l~ 315 (318)
T PF13528_consen 310 LAEFLE 315 (318)
T ss_pred HHHHHh
Confidence 777764
No 113
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=98.76 E-value=3.4e-06 Score=94.84 Aligned_cols=91 Identities=19% Similarity=0.213 Sum_probs=63.9
Q ss_pred CCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCCeEEEEC
Q 003985 639 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHID 714 (781)
Q Consensus 639 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG----~~EiI~dg~~G~lv~ 714 (781)
+.++|.+.+ .++..+ ++. .+|++|..+- ..|+.||+++|+|+|+....+ ..+.+++.+.|..++
T Consensus 273 ~~~~v~~~~----~~p~~~---ll~-~~~~~I~hgG----~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~ 340 (392)
T TIGR01426 273 LPPNVEVRQ----WVPQLE---ILK-KADAFITHGG----MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP 340 (392)
T ss_pred CCCCeEEeC----CCCHHH---HHh-hCCEEEECCC----chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec
Confidence 457899888 455444 455 5999998752 248999999999999974333 334455556787776
Q ss_pred CC--CHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q 003985 715 PY--HPDQAAELMADFFGKCKENPSHWKKISDG 745 (781)
Q Consensus 715 p~--d~e~lA~~I~~~l~~l~~dp~~~~~~s~~ 745 (781)
.. ++++++++|.+++ .|+++++++.+-
T Consensus 341 ~~~~~~~~l~~ai~~~l----~~~~~~~~~~~l 369 (392)
T TIGR01426 341 PEEVTAEKLREAVLAVL----SDPRYAERLRKM 369 (392)
T ss_pred cccCCHHHHHHHHHHHh----cCHHHHHHHHHH
Confidence 43 5788999998777 788866665443
No 114
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.69 E-value=3.7e-06 Score=95.01 Aligned_cols=150 Identities=14% Similarity=0.239 Sum_probs=98.0
Q ss_pred CCCEE-EEEeec-c-CCCChHHHHHHHHHhhccCCCeEEEEEe-CcCCCCCCcchHHHHHHHHHHHHHHHcCCC------
Q 003985 571 SKPIV-FSMARL-D-HVKNMTGLVECYGKNSQLRELVNLVVVA-GYIDVNKSKDREEIAEIEKMHELMKTYKLD------ 640 (781)
Q Consensus 571 ~k~iI-l~vGRL-~-~~Kgl~~LieA~~~l~~~~~~~~LvIVG-~g~~~~~~~d~ee~~~~~~l~~li~el~L~------ 640 (781)
++++| +..|.- . ..+++..+++++..+.+. +++.+++.- ++.+ .+.+++..++.+..
T Consensus 204 ~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~~v~~~~~~~~------------~~~~~~~l~~~g~~~~~~~~ 270 (396)
T TIGR03492 204 GRFRIALLPGSRPPEAYRNLKLLLRALEALPDS-QPFVFLAAIVPSLS------------LEKLQAILEDLGWQLEGSSE 270 (396)
T ss_pred CCCEEEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeEEEEEeCCCCC------------HHHHHHHHHhcCceecCCcc
Confidence 34444 444443 2 357788999999999755 678887665 4433 34555555554543
Q ss_pred --------CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccc---ccccccC--
Q 003985 641 --------GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP---AEIIEHG-- 707 (781)
Q Consensus 641 --------~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~---~EiI~dg-- 707 (781)
+++.+..+ ..+++.+++ +||++|..| |.+..|+|++|+|+|.....+. ..+.+..
T Consensus 271 ~~~~~~~~~~~~v~~~------~~~~~~~l~-~ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~ 338 (396)
T TIGR03492 271 DQTSLFQKGTLEVLLG------RGAFAEILH-WADLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSR 338 (396)
T ss_pred ccchhhccCceEEEec------hHhHHHHHH-hCCEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHh
Confidence 12455442 245788888 499999985 5666999999999999874443 2222321
Q ss_pred --CeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 003985 708 --ASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKR 749 (781)
Q Consensus 708 --~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~ 749 (781)
..+..+...+++.+++.+.+++ .|++.+++|.+.++++
T Consensus 339 l~g~~~~l~~~~~~~l~~~l~~ll----~d~~~~~~~~~~~~~~ 378 (396)
T TIGR03492 339 LLGGSVFLASKNPEQAAQVVRQLL----ADPELLERCRRNGQER 378 (396)
T ss_pred hcCCEEecCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHh
Confidence 2344455567899999998877 8999888888544443
No 115
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.68 E-value=5.3e-06 Score=92.78 Aligned_cols=246 Identities=16% Similarity=0.170 Sum_probs=139.7
Q ss_pred HHHHHHHHHHcCCCceEEEEcCC-CchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHH
Q 003985 394 EDVGSEITAELQGFPDFIIGNYS-DGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAM 472 (781)
Q Consensus 394 ~~~~~~i~~~l~~~pDIIh~~~~-~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~ 472 (781)
..+.+.+.+. +||+|.++.. ...+.++++|..+++|++. +|+-..+.. ..+... ....-
T Consensus 83 ~~~~~~~~~~---~Pd~vlv~GD~~~~la~alaA~~~~IPv~H-veaG~rs~~--------~~eE~~--------r~~i~ 142 (365)
T TIGR03568 83 IGFSDAFERL---KPDLVVVLGDRFEMLAAAIAAALLNIPIAH-IHGGEVTEG--------AIDESI--------RHAIT 142 (365)
T ss_pred HHHHHHHHHh---CCCEEEEeCCchHHHHHHHHHHHhCCcEEE-EECCccCCC--------CchHHH--------HHHHH
Confidence 3444444443 8999998884 4578889999999999874 344322110 011111 11233
Q ss_pred hhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEe-cCCCcCCCCCCCcHHHHHHhhhhcchh
Q 003985 473 NNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIV-SPGADMDIYFPYSEKQKRLTALHGSIE 551 (781)
Q Consensus 473 ~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VI-pnGvD~~~f~p~~~~~~rl~~~~~~i~ 551 (781)
+-|+...+++....+.+.+ -|++ ..++.++ .+++|.-..........
T Consensus 143 ~la~l~f~~t~~~~~~L~~--------------------eg~~--~~~i~~tG~~~iD~l~~~~~~~~~~---------- 190 (365)
T TIGR03568 143 KLSHLHFVATEEYRQRVIQ--------------------MGED--PDRVFNVGSPGLDNILSLDLLSKEE---------- 190 (365)
T ss_pred HHHhhccCCCHHHHHHHHH--------------------cCCC--CCcEEEECCcHHHHHHhhhccCHHH----------
Confidence 4467777788766542111 1333 4566665 44566432211111111
Q ss_pred hhccCccccccccCCCCCCCCCE-EEEEeecc--CC---CChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHH
Q 003985 552 QLLFDPEQNDEHVGTLSDRSKPI-VFSMARLD--HV---KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIA 625 (781)
Q Consensus 552 ~~l~~~~~~~~~~g~l~~~~k~i-Il~vGRL~--~~---Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~ 625 (781)
..+.+|+ ++++++ ++.+-+-. .. +.+..+++++..+ ..++ +++....++ .+..
T Consensus 191 --------~~~~lgl--~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~---~~~~--~vi~P~~~p------~~~~ 249 (365)
T TIGR03568 191 --------LEEKLGI--DLDKPYALVTFHPVTLEKESAEEQIKELLKALDEL---NKNY--IFTYPNADA------GSRI 249 (365)
T ss_pred --------HHHHhCC--CCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHh---ccCC--EEEEeCCCC------CchH
Confidence 1133565 333344 44454432 23 3445555555443 2234 344322111 0111
Q ss_pred HHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccc
Q 003985 626 EIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIE 705 (781)
Q Consensus 626 ~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~ 705 (781)
..+.+.++..+ .++|++++ +++..++..+++. |+++|--|. | .+.||.++|+|||. .|.-.|.++
T Consensus 250 i~~~i~~~~~~---~~~v~l~~----~l~~~~~l~Ll~~-a~~vitdSS----g-gi~EA~~lg~Pvv~--l~~R~e~~~ 314 (365)
T TIGR03568 250 INEAIEEYVNE---HPNFRLFK----SLGQERYLSLLKN-ADAVIGNSS----S-GIIEAPSFGVPTIN--IGTRQKGRL 314 (365)
T ss_pred HHHHHHHHhcC---CCCEEEEC----CCChHHHHHHHHh-CCEEEEcCh----h-HHHhhhhcCCCEEe--ecCCchhhh
Confidence 22333333211 46799998 7888999999995 999886542 2 34899999999995 467888888
Q ss_pred cCCeEEEECCCCHHHHHHHHHHH
Q 003985 706 HGASGFHIDPYHPDQAAELMADF 728 (781)
Q Consensus 706 dg~~G~lv~p~d~e~lA~~I~~~ 728 (781)
.|.+++++ +.|++++.+++.++
T Consensus 315 ~g~nvl~v-g~~~~~I~~a~~~~ 336 (365)
T TIGR03568 315 RADSVIDV-DPDKEEIVKAIEKL 336 (365)
T ss_pred hcCeEEEe-CCCHHHHHHHHHHH
Confidence 88888888 45899999999774
No 116
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.63 E-value=6.1e-07 Score=85.32 Aligned_cols=123 Identities=20% Similarity=0.197 Sum_probs=79.9
Q ss_pred HHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHH
Q 003985 318 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVG 397 (781)
Q Consensus 318 eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~ 397 (781)
++++.|.++|++|+ ++|..... +.....+++.+++++.... ..++++. +. .+.
T Consensus 15 ~~~~~L~~~g~~V~----ii~~~~~~----------~~~~~~~~i~~~~~~~~~k-----------~~~~~~~-~~-~l~ 67 (139)
T PF13477_consen 15 NLAKELKKRGYDVH----IITPRNDY----------EKYEIIEGIKVIRLPSPRK-----------SPLNYIK-YF-RLR 67 (139)
T ss_pred HHHHHHHHCCCEEE----EEEcCCCc----------hhhhHhCCeEEEEecCCCC-----------ccHHHHH-HH-HHH
Confidence 67778899999999 99874221 1111234678888864421 1444553 22 444
Q ss_pred HHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcC-CcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhC
Q 003985 398 SEITAELQGFPDFIIGNYSDG-NLVASLLAYKMG-ITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNA 475 (781)
Q Consensus 398 ~~i~~~l~~~pDIIh~~~~~~-~lva~llar~~g-vp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~A 475 (781)
+.+.+ .+||+||+|...+ ++++.++++..+ +|++++.|+...... .. ..+ .++ .....+++.|
T Consensus 68 k~ik~---~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~~--~~-~~~----~~~-----~~~~~~~k~~ 132 (139)
T PF13477_consen 68 KIIKK---EKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYNS--SK-KKK----LKK-----FIIKFAFKRA 132 (139)
T ss_pred HHhcc---CCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeecC--Cc-hHH----HHH-----HHHHHHHHhC
Confidence 44544 3899999999887 788989999998 999999998644221 11 110 111 1244688999
Q ss_pred CEEEecC
Q 003985 476 DFIITST 482 (781)
Q Consensus 476 D~IIt~S 482 (781)
|.|++.|
T Consensus 133 ~~ii~~~ 139 (139)
T PF13477_consen 133 DKIIVQS 139 (139)
T ss_pred CEEEEcC
Confidence 9999875
No 117
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.57 E-value=3.3e-05 Score=85.71 Aligned_cols=263 Identities=15% Similarity=0.172 Sum_probs=165.7
Q ss_pred CceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHH
Q 003985 407 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 486 (781)
Q Consensus 407 ~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~ 486 (781)
+||+.+.-.+..-..-..-+++.|+|++..-=-+.. .|-..|+.+ .+ .....+...|.|++-|+...
T Consensus 123 ~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRLS~----rS~~~y~k~-------~~--~~~~~~~~i~li~aQse~D~ 189 (419)
T COG1519 123 RPKLLIIMETELWPNLINELKRRGIPLVLVNARLSD----RSFARYAKL-------KF--LARLLFKNIDLILAQSEEDA 189 (419)
T ss_pred CCCEEEEEeccccHHHHHHHHHcCCCEEEEeeeech----hhhHHHHHH-------HH--HHHHHHHhcceeeecCHHHH
Confidence 899888666554333445667889998864211110 011122222 21 23356788999999998766
Q ss_pred hhccccccccccccccccccceeeeccCCCCCCceEEecCC-CcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccC
Q 003985 487 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (781)
Q Consensus 487 ~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnG-vD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g 565 (781)
+ +|.+. |. .++.+.-|= .|.+ +.+........ .+.+++
T Consensus 190 ~-------Rf~~L-------------Ga----~~v~v~GNlKfd~~---~~~~~~~~~~~--------------~r~~l~ 228 (419)
T COG1519 190 Q-------RFRSL-------------GA----KPVVVTGNLKFDIE---PPPQLAAELAA--------------LRRQLG 228 (419)
T ss_pred H-------HHHhc-------------CC----cceEEecceeecCC---CChhhHHHHHH--------------HHHhcC
Confidence 5 33332 22 223333331 1111 11111111111 112233
Q ss_pred CCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCC----
Q 003985 566 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDG---- 641 (781)
Q Consensus 566 ~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~---- 641 (781)
..+++++..+. ...--+.+++++..+++.+|++.+++|=..|+ ..+.+.+++++.|+.-
T Consensus 229 ----~~r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~llIlVPRHpE-----------Rf~~v~~l~~~~gl~~~~rS 291 (419)
T COG1519 229 ----GHRPVWVAAST--HEGEEEIILDAHQALKKQFPNLLLILVPRHPE-----------RFKAVENLLKRKGLSVTRRS 291 (419)
T ss_pred ----CCCceEEEecC--CCchHHHHHHHHHHHHhhCCCceEEEecCChh-----------hHHHHHHHHHHcCCeEEeec
Confidence 22777777776 33334558899999999999999999988875 4678888999988731
Q ss_pred --------cEEEeccccCcCChHHHHHHHHccCcE-EEEcCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccCC
Q 003985 642 --------QFRWIAAQTNRARNGELYRYIADTKGA-FVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHGA 708 (781)
Q Consensus 642 --------~V~flG~~~~~v~~~el~~~la~aadv-fV~PS~~E~fGltvlEAMa~GlPVIaT----~~GG~~EiI~dg~ 708 (781)
.=.++| -..+|+..+|. .+|+ ||=-|+.+--|--++|+.++|+|||.- +.....+-+...+
T Consensus 292 ~~~~~~~~tdV~l~-----DtmGEL~l~y~-~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~g 365 (419)
T COG1519 292 QGDPPFSDTDVLLG-----DTMGELGLLYG-IADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAG 365 (419)
T ss_pred CCCCCCCCCcEEEE-----ecHhHHHHHHh-hccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcC
Confidence 012333 14689999999 5886 555677766688899999999999986 3444445455566
Q ss_pred eEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH
Q 003985 709 SGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (781)
Q Consensus 709 ~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~ 752 (781)
.|+.++ |.+.+++++..++ .|++.++++++++...+.+
T Consensus 366 a~~~v~--~~~~l~~~v~~l~----~~~~~r~~~~~~~~~~v~~ 403 (419)
T COG1519 366 AGLQVE--DADLLAKAVELLL----ADEDKREAYGRAGLEFLAQ 403 (419)
T ss_pred CeEEEC--CHHHHHHHHHHhc----CCHHHHHHHHHHHHHHHHH
Confidence 788887 5666666664444 8899999999999999864
No 118
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=98.50 E-value=1.7e-05 Score=87.05 Aligned_cols=75 Identities=13% Similarity=0.105 Sum_probs=53.9
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccc------ccccCCeEEEE
Q 003985 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE------IIEHGASGFHI 713 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~E------iI~dg~~G~lv 713 (781)
.+++.+.++. + .++..++.. +|++|.-+- ..++.||+++|+|++.....+..| .+++.+.|..+
T Consensus 228 ~~~v~~~~~~----~-~~~~~~l~~-ad~vI~~~G----~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l 297 (321)
T TIGR00661 228 NENVEIRRIT----T-DNFKELIKN-AELVITHGG----FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL 297 (321)
T ss_pred CCCEEEEECC----h-HHHHHHHHh-CCEEEECCC----hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc
Confidence 4688888742 2 468888885 999999863 247999999999999987655333 45566778888
Q ss_pred CCCCHHHHHHHH
Q 003985 714 DPYHPDQAAELM 725 (781)
Q Consensus 714 ~p~d~e~lA~~I 725 (781)
+..+. ++.+++
T Consensus 298 ~~~~~-~~~~~~ 308 (321)
T TIGR00661 298 EYKEL-RLLEAI 308 (321)
T ss_pred ChhhH-HHHHHH
Confidence 77666 333333
No 119
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.27 E-value=7.7e-05 Score=82.86 Aligned_cols=260 Identities=15% Similarity=0.182 Sum_probs=138.6
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHh
Q 003985 395 DVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (781)
Q Consensus 395 ~~~~~i~~~l~~~pDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~ 473 (781)
.+...+.+. +||+|..+.-.. .+.++++|..+++|++ .+|+--.+. +......+...| ..+-+
T Consensus 58 ~~~~~~~~~---~Pd~Vlv~GD~~~~la~alaA~~~~ipv~-HieaGlRs~----d~~~g~~de~~R--------~~i~~ 121 (346)
T PF02350_consen 58 ELADVLERE---KPDAVLVLGDRNEALAAALAAFYLNIPVA-HIEAGLRSG----DRTEGMPDEINR--------HAIDK 121 (346)
T ss_dssp HHHHHHHHH---T-SEEEEETTSHHHHHHHHHHHHTT-EEE-EES-----S-----TTSSTTHHHHH--------HHHHH
T ss_pred HHHHHHHhc---CCCEEEEEcCCchHHHHHHHHHHhCCCEE-EecCCCCcc----ccCCCCchhhhh--------hhhhh
Confidence 344444444 999999877554 6888999999999954 445421100 000001122111 12445
Q ss_pred hCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecC-CCcCCCCCCCcHHHHHHhhhhcchhh
Q 003985 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYFPYSEKQKRLTALHGSIEQ 552 (781)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpn-GvD~~~f~p~~~~~~rl~~~~~~i~~ 552 (781)
-|+.-+++|....+.+.+ -|++ ..++.++-| ++|.-. ... ....+...
T Consensus 122 la~lhf~~t~~~~~~L~~--------------------~G~~--~~rI~~vG~~~~D~l~-----~~~---~~~~~~~~- 170 (346)
T PF02350_consen 122 LAHLHFAPTEEARERLLQ--------------------EGEP--PERIFVVGNPGIDALL-----QNK---EEIEEKYK- 170 (346)
T ss_dssp H-SEEEESSHHHHHHHHH--------------------TT----GGGEEE---HHHHHHH-----HHH---HTTCC-HH-
T ss_pred hhhhhccCCHHHHHHHHh--------------------cCCC--CCeEEEEChHHHHHHH-----HhH---HHHhhhhh-
Confidence 689999999877653222 2444 668877744 333210 000 00000000
Q ss_pred hccCccccccccCCCC-CCCCCEEEEEeeccC---CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHH
Q 003985 553 LLFDPEQNDEHVGTLS-DRSKPIVFSMARLDH---VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIE 628 (781)
Q Consensus 553 ~l~~~~~~~~~~g~l~-~~~k~iIl~vGRL~~---~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~ 628 (781)
..++.. .+++.++++.=|... ......+.+++..+.+. +++++++.....+ ....
T Consensus 171 ----------~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p----------~~~~ 229 (346)
T PF02350_consen 171 ----------NSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNP----------RGSD 229 (346)
T ss_dssp ----------HHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-H----------HHHH
T ss_pred ----------hHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCc----------hHHH
Confidence 002211 233444555534332 34567788888888776 6788888887544 2344
Q ss_pred HHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHH-HHHHcCCcEEEc-Ccccccccccc
Q 003985 629 KMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVV-EAMTCGLPTFAT-CHGGPAEIIEH 706 (781)
Q Consensus 629 ~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvl-EAMa~GlPVIaT-~~GG~~EiI~d 706 (781)
.+.+..+++ ++|+++. +++..++..+++. +++.|-=| | .+. ||.++|+|||.- +.|.-.+.+..
T Consensus 230 ~i~~~l~~~---~~v~~~~----~l~~~~~l~ll~~-a~~vvgdS-----s-GI~eEa~~lg~P~v~iR~~geRqe~r~~ 295 (346)
T PF02350_consen 230 IIIEKLKKY---DNVRLIE----PLGYEEYLSLLKN-ADLVVGDS-----S-GIQEEAPSLGKPVVNIRDSGERQEGRER 295 (346)
T ss_dssp HHHHHHTT----TTEEEE--------HHHHHHHHHH-ESEEEESS-----H-HHHHHGGGGT--EEECSSS-S-HHHHHT
T ss_pred HHHHHhccc---CCEEEEC----CCCHHHHHHHHhc-ceEEEEcC-----c-cHHHHHHHhCCeEEEecCCCCCHHHHhh
Confidence 555555554 3899998 7788999999995 88877654 6 788 999999999998 45566667666
Q ss_pred CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHH
Q 003985 707 GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKI 742 (781)
Q Consensus 707 g~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~ 742 (781)
+.+-+ +. .|.+++.++|.+++ .+++.+.++
T Consensus 296 ~~nvl-v~-~~~~~I~~ai~~~l----~~~~~~~~~ 325 (346)
T PF02350_consen 296 GSNVL-VG-TDPEAIIQAIEKAL----SDKDFYRKL 325 (346)
T ss_dssp TSEEE-ET-SSHHHHHHHHHHHH----H-HHHHHHH
T ss_pred cceEE-eC-CCHHHHHHHHHHHH----hChHHHHhh
Confidence 66555 76 69999999998877 454544443
No 120
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.26 E-value=9.5e-05 Score=79.65 Aligned_cols=97 Identities=14% Similarity=0.248 Sum_probs=70.4
Q ss_pred CCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEE-EEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003985 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLV-VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (781)
Q Consensus 572 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~Lv-IVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~ 650 (781)
+.+++++|..+..+....+++++.++. .++++. |+|.+.. ..+++++.++.. ++|++.++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~~i~vv~G~~~~-----------~~~~l~~~~~~~---~~i~~~~~-- 231 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ---INISITLVTGSSNP-----------NLDELKKFAKEY---PNIILFID-- 231 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc---cCceEEEEECCCCc-----------CHHHHHHHHHhC---CCEEEEeC--
Confidence 457899999998776677888887653 334433 5565532 135566666553 47888884
Q ss_pred CcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCc
Q 003985 651 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH 697 (781)
Q Consensus 651 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~ 697 (781)
..++..+|+. +|++|.+ .|.|+.|++++|+|+|+...
T Consensus 232 ----~~~m~~lm~~-aDl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 232 ----VENMAELMNE-ADLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred ----HHHHHHHHHH-CCEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 3468888995 9999995 57999999999999998754
No 121
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=98.23 E-value=2.1e-05 Score=89.47 Aligned_cols=186 Identities=11% Similarity=0.070 Sum_probs=119.8
Q ss_pred cccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc
Q 003985 558 EQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY 637 (781)
Q Consensus 558 ~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el 637 (781)
...|+.+|+ +.+..++++..++ .|=-...++++.++.+.-|+.+|++...... ..+.+++.+.++
T Consensus 273 ~~~R~~~gL--p~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~-----------~~~~l~~~~~~~ 337 (468)
T PF13844_consen 273 VTTRAQYGL--PEDAVVFGSFNNL--FKISPETLDLWARILKAVPNSRLWLLRFPAS-----------GEARLRRRFAAH 337 (468)
T ss_dssp EEETGGGT----SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEEEEEEETSTT-----------HHHHHHHHHHHT
T ss_pred ccCHHHcCC--CCCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcEEEEeeCCHH-----------HHHHHHHHHHHc
Confidence 345678999 5566556556654 5566888999999988889999998875432 136788889999
Q ss_pred CCC-CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccccc-----c-cCCeE
Q 003985 638 KLD-GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEII-----E-HGASG 710 (781)
Q Consensus 638 ~L~-~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI-----~-dg~~G 710 (781)
|+. +++.|.+ ..+.++-.+.+.. +|+++=|-.+- -|.|.+||+.+|+|||+-.......-+ . -|-..
T Consensus 338 Gv~~~Ri~f~~----~~~~~ehl~~~~~-~DI~LDT~p~n-G~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~E 411 (468)
T PF13844_consen 338 GVDPDRIIFSP----VAPREEHLRRYQL-ADICLDTFPYN-GGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPE 411 (468)
T ss_dssp TS-GGGEEEEE-------HHHHHHHGGG--SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GG
T ss_pred CCChhhEEEcC----CCCHHHHHHHhhh-CCEEeeCCCCC-CcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCch
Confidence 986 7899988 4556677777774 99999985443 378999999999999986422222111 1 12233
Q ss_pred EEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003985 711 FHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 711 ~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll~ 770 (781)
++. .|.++..+.-.++. .|++.++++++.-+++..+.-=|+....++..|+.+.
T Consensus 412 lIA--~s~~eYv~~Av~La----~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~ 465 (468)
T PF13844_consen 412 LIA--DSEEEYVEIAVRLA----TDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYR 465 (468)
T ss_dssp GB---SSHHHHHHHHHHHH----H-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHH
T ss_pred hcC--CCHHHHHHHHHHHh----CCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHH
Confidence 333 37899988887776 8999999999999888766655777777777777764
No 122
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=98.16 E-value=0.00098 Score=77.82 Aligned_cols=138 Identities=14% Similarity=0.013 Sum_probs=90.4
Q ss_pred CCEEEEEeeccCC-----CChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003985 572 KPIVFSMARLDHV-----KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (781)
Q Consensus 572 k~iIl~vGRL~~~-----Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~fl 646 (781)
++++++.|..... +-+..+++|++++. .++++..++.. .. .+++++|.+.
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~-----~~viw~~~~~~------------~~--------~~~p~Nv~i~ 351 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-----YNVLWKYDGEV------------EA--------INLPANVLTQ 351 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC-----CeEEEEECCCc------------Cc--------ccCCCceEEe
Confidence 4678889987532 23456667776553 46666555422 00 2467889988
Q ss_pred ccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccCCeEEEECCC--CHHH
Q 003985 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEHGASGFHIDPY--HPDQ 720 (781)
Q Consensus 647 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~----~GG~~EiI~dg~~G~lv~p~--d~e~ 720 (781)
+ +++..++... . .+++||.= |-..++.||+.+|+|+|+.. ....+..++..+.|..++.. +.++
T Consensus 352 ~----w~Pq~~lL~h-p-~v~~fItH----GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~ 421 (507)
T PHA03392 352 K----WFPQRAVLKH-K-NVKAFVTQ----GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQ 421 (507)
T ss_pred c----CCCHHHHhcC-C-CCCEEEec----CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHH
Confidence 8 5666565531 1 36788875 33568999999999999973 33455556666788888754 5678
Q ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHHH
Q 003985 721 AAELMADFFGKCKENPSHWKKISDGGLK 748 (781)
Q Consensus 721 lA~~I~~~l~~l~~dp~~~~~~s~~a~~ 748 (781)
+.++|.+++ .||.+++...+-+..
T Consensus 422 l~~ai~~vl----~~~~y~~~a~~ls~~ 445 (507)
T PHA03392 422 LVLAIVDVI----ENPKYRKNLKELRHL 445 (507)
T ss_pred HHHHHHHHh----CCHHHHHHHHHHHHH
Confidence 888887776 888877765554433
No 123
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=98.09 E-value=0.00036 Score=77.92 Aligned_cols=241 Identities=21% Similarity=0.207 Sum_probs=139.2
Q ss_pred CCCceEEEEcC-CCchHHHHHHHHHcCCc--EEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEec
Q 003985 405 QGFPDFIIGNY-SDGNLVASLLAYKMGIT--QCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITS 481 (781)
Q Consensus 405 ~~~pDIIh~~~-~~~~lva~llar~~gvp--~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~ 481 (781)
..+||+++.-+ ++.|+-.+...|+.|++ +++.+- + +-+.|+.-. -...-+.+|.+++.
T Consensus 80 ~~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI~---P-----qvWAWr~~R-----------~~~i~~~~D~ll~i 140 (373)
T PF02684_consen 80 EEKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYIS---P-----QVWAWRPGR-----------AKKIKKYVDHLLVI 140 (373)
T ss_pred HcCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEEC---C-----ceeeeCccH-----------HHHHHHHHhheeEC
Confidence 45999998554 55588777777888877 554331 1 112232111 11244567888888
Q ss_pred CHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCC-CcCCCCCCCcHHHHHHhhhhcchhhhccCcccc
Q 003985 482 TYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (781)
Q Consensus 482 S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnG-vD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~ 560 (781)
=+-|.+ -|+.+ | -++..|-|. +|.-...+. ....
T Consensus 141 fPFE~~-------~y~~~-------------g-----~~~~~VGHPl~d~~~~~~~--~~~~------------------ 175 (373)
T PF02684_consen 141 FPFEPE-------FYKKH-------------G-----VPVTYVGHPLLDEVKPEPD--RAEA------------------ 175 (373)
T ss_pred CcccHH-------HHhcc-------------C-----CCeEEECCcchhhhccCCC--HHHH------------------
Confidence 776654 12211 2 245555443 333211111 1111
Q ss_pred ccccCCCCCCCCCEEEEE-e-eccC-CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc
Q 003985 561 DEHVGTLSDRSKPIVFSM-A-RLDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY 637 (781)
Q Consensus 561 ~~~~g~l~~~~k~iIl~v-G-RL~~-~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el 637 (781)
++++ + ++++++|..+ | |-.+ .+.+..++++++++.+.+|++++++...... ..+.+.+.....
T Consensus 176 ~~~~-l--~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~-----------~~~~i~~~~~~~ 241 (373)
T PF02684_consen 176 REKL-L--DPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEV-----------HEELIEEILAEY 241 (373)
T ss_pred HHhc-C--CCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHH-----------HHHHHHHHHHhh
Confidence 0123 3 5566665443 4 4444 4455888999999999999999998875432 123355555555
Q ss_pred CCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-ccc----------------c
Q 003985 638 KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGG----------------P 700 (781)
Q Consensus 638 ~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~-~GG----------------~ 700 (781)
+..-.+.... ++-+..++. ||+.+..| |.+.+|++.+|+|.|..- .+. +
T Consensus 242 ~~~~~~~~~~--------~~~~~~m~~-ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL 307 (373)
T PF02684_consen 242 PPDVSIVIIE--------GESYDAMAA-ADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISL 307 (373)
T ss_pred CCCCeEEEcC--------CchHHHHHh-CcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeec
Confidence 5433343332 256778884 99888876 999999999999999863 222 2
Q ss_pred ccccccCC--eEEEECCCCHHHHHHHHHHHHHhccCCHHHHHH
Q 003985 701 AEIIEHGA--SGFHIDPYHPDQAAELMADFFGKCKENPSHWKK 741 (781)
Q Consensus 701 ~EiI~dg~--~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~ 741 (781)
+.++-+.. --++-+.-+++.+++++.+++ .|++.++.
T Consensus 308 ~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll----~~~~~~~~ 346 (373)
T PF02684_consen 308 PNIIAGREVVPELIQEDATPENIAAELLELL----ENPEKRKK 346 (373)
T ss_pred hhhhcCCCcchhhhcccCCHHHHHHHHHHHh----cCHHHHHH
Confidence 22221110 112223448899999998877 78776444
No 124
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=97.94 E-value=0.0016 Score=71.86 Aligned_cols=62 Identities=16% Similarity=0.193 Sum_probs=44.2
Q ss_pred HHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc---cccccccCCeEEEECCCCHHHHHHHHHHH
Q 003985 659 YRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG---PAEIIEHGASGFHIDPYHPDQAAELMADF 728 (781)
Q Consensus 659 ~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG---~~EiI~dg~~G~lv~p~d~e~lA~~I~~~ 728 (781)
..+++ -||++|-- -|....||...|+|+|.+..|- .-+.+. +.|+++...|++++.+.+...
T Consensus 243 ~~Ll~-~a~l~Ig~-----ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~--~~Gll~~~~~~~ei~~~v~~~ 307 (335)
T PF04007_consen 243 LDLLY-YADLVIGG-----GGTMAREAALLGTPAISCFPGKLLAVDKYLI--EKGLLYHSTDPDEIVEYVRKN 307 (335)
T ss_pred HHHHH-hcCEEEeC-----CcHHHHHHHHhCCCEEEecCCcchhHHHHHH--HCCCeEecCCHHHHHHHHHHh
Confidence 35666 38888865 3677899999999999975442 323332 347888888999988866543
No 125
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=97.82 E-value=8.3e-05 Score=81.74 Aligned_cols=94 Identities=28% Similarity=0.353 Sum_probs=64.0
Q ss_pred HHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccc----cccccC-CeEEEE-C------CCCHHHHHHHHHH
Q 003985 660 RYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPA----EIIEHG-ASGFHI-D------PYHPDQAAELMAD 727 (781)
Q Consensus 660 ~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~----EiI~dg-~~G~lv-~------p~d~e~lA~~I~~ 727 (781)
.+.+ .+.+.|+||+||++|.|..|.-.+|+|-|.|+..|.. |.|++. ..|+.+ | ....++++.-+.+
T Consensus 496 eFVR-GCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~~ 574 (692)
T KOG3742|consen 496 EFVR-GCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMYE 574 (692)
T ss_pred HHhc-cccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHHH
Confidence 3444 5999999999999999999999999999999987754 444432 356655 2 1234445555554
Q ss_pred HHHhccCCHHHHHHHHHHHH-HHHHHhcCcchh
Q 003985 728 FFGKCKENPSHWKKISDGGL-KRIYERLVVSSD 759 (781)
Q Consensus 728 ~l~~l~~dp~~~~~~s~~a~-~~v~~~ysw~~~ 759 (781)
|. ....|+++.++.+ ++..+-.+|+.+
T Consensus 575 F~-----~qsRRQRIiqRNrtErLSdLLDWk~l 602 (692)
T KOG3742|consen 575 FC-----KQSRRQRIIQRNRTERLSDLLDWKYL 602 (692)
T ss_pred HH-----HHHHHHHHHHhcchhhHHHHHhHHHH
Confidence 43 3456666665443 456566788765
No 126
>PLN02448 UDP-glycosyltransferase family protein
Probab=97.76 E-value=0.021 Score=65.94 Aligned_cols=139 Identities=13% Similarity=0.131 Sum_probs=79.4
Q ss_pred CCCEEEEEeeccC--CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003985 571 SKPIVFSMARLDH--VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (781)
Q Consensus 571 ~k~iIl~vGRL~~--~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~ 648 (781)
...+.++.|.... .+-+..++++++.. +..++++..+.. ..+.+.. .+++...+
T Consensus 274 ~~vvyvsfGs~~~~~~~~~~~~~~~l~~~-----~~~~lw~~~~~~-------------~~~~~~~-----~~~~~v~~- 329 (459)
T PLN02448 274 GSVLYVSLGSFLSVSSAQMDEIAAGLRDS-----GVRFLWVARGEA-------------SRLKEIC-----GDMGLVVP- 329 (459)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCch-------------hhHhHhc-----cCCEEEec-
Confidence 4567788887643 22244555555543 457776654321 0111111 24566666
Q ss_pred ccCcCChHHHHHHHHccCcE--EEEcCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccC-CeEEEECC------
Q 003985 649 QTNRARNGELYRYIADTKGA--FVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEHG-ASGFHIDP------ 715 (781)
Q Consensus 649 ~~~~v~~~el~~~la~aadv--fV~PS~~E~fGltvlEAMa~GlPVIaT~----~GG~~EiI~dg-~~G~lv~p------ 715 (781)
+++..++.. ..++ ||.= +-..+++||+++|+|+|+-. ....+..+.+. +.|+-+..
T Consensus 330 ---w~pQ~~iL~----h~~v~~fvtH----gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~ 398 (459)
T PLN02448 330 ---WCDQLKVLC----HSSVGGFWTH----CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEET 398 (459)
T ss_pred ---cCCHHHHhc----cCccceEEec----CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCC
Confidence 566666665 2443 5553 22469999999999999963 33444555542 45666632
Q ss_pred -CCHHHHHHHHHHHHHhccCCH-HHHHHHHHHHHH
Q 003985 716 -YHPDQAAELMADFFGKCKENP-SHWKKISDGGLK 748 (781)
Q Consensus 716 -~d~e~lA~~I~~~l~~l~~dp-~~~~~~s~~a~~ 748 (781)
-+.+++++++.+++ .++ +..+++.+++.+
T Consensus 399 ~~~~~~l~~av~~vl----~~~~~~~~~~r~~a~~ 429 (459)
T PLN02448 399 LVGREEIAELVKRFM----DLESEEGKEMRRRAKE 429 (459)
T ss_pred cCcHHHHHHHHHHHh----cCCchhHHHHHHHHHH
Confidence 36788888888877 553 334444444443
No 127
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=97.68 E-value=0.0014 Score=74.55 Aligned_cols=135 Identities=14% Similarity=0.116 Sum_probs=91.6
Q ss_pred CCCEEEEEeeccCCCChHHHHHHH-HHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 003985 571 SKPIVFSMARLDHVKNMTGLVECY-GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (781)
Q Consensus 571 ~k~iIl~vGRL~~~Kgl~~LieA~-~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~ 649 (781)
.+++.++.|..... ..+++.+ ..+... ++++++..++.+ . ..-++++++...+
T Consensus 237 ~~~vyvslGt~~~~---~~l~~~~~~a~~~l--~~~vi~~~~~~~------------------~-~~~~~p~n~~v~~-- 290 (406)
T COG1819 237 RPIVYVSLGTVGNA---VELLAIVLEALADL--DVRVIVSLGGAR------------------D-TLVNVPDNVIVAD-- 290 (406)
T ss_pred CCeEEEEcCCcccH---HHHHHHHHHHHhcC--CcEEEEeccccc------------------c-ccccCCCceEEec--
Confidence 44556777776654 3333332 233332 577777776622 0 1235778898887
Q ss_pred cCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccCCeEEEEC--CCCHHHHHH
Q 003985 650 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEHGASGFHID--PYHPDQAAE 723 (781)
Q Consensus 650 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~----~GG~~EiI~dg~~G~lv~--p~d~e~lA~ 723 (781)
.++..++.. .+|++|+.. | -.++.||+.+|+|+|+-- ....++-+++-+.|..+. ..+.+.+++
T Consensus 291 --~~p~~~~l~----~ad~vI~hG---G-~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~ 360 (406)
T COG1819 291 --YVPQLELLP----RADAVIHHG---G-AGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLRA 360 (406)
T ss_pred --CCCHHHHhh----hcCEEEecC---C-cchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHHH
Confidence 566666554 699999983 2 458899999999999963 334666777778898887 579999999
Q ss_pred HHHHHHHhccCCHHHHHHHHHH
Q 003985 724 LMADFFGKCKENPSHWKKISDG 745 (781)
Q Consensus 724 ~I~~~l~~l~~dp~~~~~~s~~ 745 (781)
+|.+++ .|+..++...+.
T Consensus 361 av~~vL----~~~~~~~~~~~~ 378 (406)
T COG1819 361 AVNEVL----ADDSYRRAAERL 378 (406)
T ss_pred HHHHHh----cCHHHHHHHHHH
Confidence 998887 788776665443
No 128
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.55 E-value=0.0074 Score=70.77 Aligned_cols=250 Identities=16% Similarity=0.173 Sum_probs=134.2
Q ss_pred CCCceEEEEc-CCCchHHHHHHHHHcCC--cEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEec
Q 003985 405 QGFPDFIIGN-YSDGNLVASLLAYKMGI--TQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITS 481 (781)
Q Consensus 405 ~~~pDIIh~~-~~~~~lva~llar~~gv--p~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~ 481 (781)
..+||++++- +++.|+-.+..+|+.|+ |+++.+- + +-+.|+.-. -...-+.+|.++|.
T Consensus 308 ~~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVs---P-----qVWAWR~~R-----------ikki~k~vD~ll~I 368 (608)
T PRK01021 308 KTNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVC---P-----SIWAWRPKR-----------KTILEKYLDLLLLI 368 (608)
T ss_pred hcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEEC---c-----cceeeCcch-----------HHHHHHHhhhheec
Confidence 4599999964 45558766667777885 8776442 1 112232111 11234567888888
Q ss_pred CHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCC-CcCCCCCCCcHHHHHHhhhhcchhhhccCcccc
Q 003985 482 TYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (781)
Q Consensus 482 S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnG-vD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~ 560 (781)
=+-|.+ +|+. +|+ +++.|-|. +|.-...+.....
T Consensus 369 fPFE~~-------------------~y~~-~gv-----~v~yVGHPL~d~i~~~~~~~~~-------------------- 403 (608)
T PRK01021 369 LPFEQN-------------------LFKD-SPL-----RTVYLGHPLVETISSFSPNLSW-------------------- 403 (608)
T ss_pred CccCHH-------------------HHHh-cCC-----CeEEECCcHHhhcccCCCHHHH--------------------
Confidence 776654 2221 232 44445333 3432111222111
Q ss_pred ccccCCCCCCCCCEEE-EEe-eccC-CCChHHHHHHHH--HhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH
Q 003985 561 DEHVGTLSDRSKPIVF-SMA-RLDH-VKNMTGLVECYG--KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 635 (781)
Q Consensus 561 ~~~~g~l~~~~k~iIl-~vG-RL~~-~Kgl~~LieA~~--~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~ 635 (781)
++++|+ ++++++|. ..| |-.+ .+.+..+++++. ++.+ +.++++.... . ...+.+++.++
T Consensus 404 r~~lgl--~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~---~l~fvvp~a~-~----------~~~~~i~~~~~ 467 (608)
T PRK01021 404 KEQLHL--PSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLAS---THQLLVSSAN-P----------KYDHLILEVLQ 467 (608)
T ss_pred HHHcCC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhcc---CeEEEEecCc-h----------hhHHHHHHHHh
Confidence 134666 44556553 344 4444 556677888887 4433 5777664332 1 12344555554
Q ss_pred HcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-cc----------------
Q 003985 636 TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HG---------------- 698 (781)
Q Consensus 636 el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~-~G---------------- 698 (781)
..++ -.+..+. ..+-+..++ +||+.+..| |.+.+|++.+|+|.|... .+
T Consensus 468 ~~~~-~~~~ii~-------~~~~~~~m~-aaD~aLaaS-----GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~ 533 (608)
T PRK01021 468 QEGC-LHSHIVP-------SQFRYELMR-ECDCALAKC-----GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILP 533 (608)
T ss_pred hcCC-CCeEEec-------CcchHHHHH-hcCeeeecC-----CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCC
Confidence 3331 1234432 012367777 599999886 999999999999999863 22
Q ss_pred --ccccccccCC-eEEEE---CCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc
Q 003985 699 --GPAEIIEHGA-SGFHI---DPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERL 754 (781)
Q Consensus 699 --G~~EiI~dg~-~G~lv---~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~y 754 (781)
+.+.++.+.. .=-++ +.-+++.+++++ +++ .|++.++++.+. .+.+.+..
T Consensus 534 yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL----~d~~~r~~~~~~-l~~lr~~L 589 (608)
T PRK01021 534 AYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DIL----KTSQSKEKQKDA-CRDLYQAM 589 (608)
T ss_pred eeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHh----cCHHHHHHHHHH-HHHHHHHh
Confidence 1122221111 01122 234688888885 655 788877776654 34444443
No 129
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.47 E-value=0.0025 Score=70.33 Aligned_cols=200 Identities=19% Similarity=0.164 Sum_probs=116.1
Q ss_pred CCCceEEEEcCCC-chHHHHHHHHHcC--CcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEec
Q 003985 405 QGFPDFIIGNYSD-GNLVASLLAYKMG--ITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITS 481 (781)
Q Consensus 405 ~~~pDIIh~~~~~-~~lva~llar~~g--vp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~ 481 (781)
..+||++++-++. .|+-....-|+.| +|+|+.+- + +-+.|+.-. -....+.+|++.+.
T Consensus 83 ~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~---P-----sVWAWr~~R-----------a~~i~~~~D~lLai 143 (381)
T COG0763 83 ANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS---P-----SVWAWRPKR-----------AVKIAKYVDHLLAI 143 (381)
T ss_pred hcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC---c-----ceeeechhh-----------HHHHHHHhhHeeee
Confidence 5599999966654 4665555555556 88775442 1 223343221 12356789999998
Q ss_pred CHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecC-CCcCCCCCCCcHHHHHHhhhhcchhhhccCcccc
Q 003985 482 TYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (781)
Q Consensus 482 S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpn-GvD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~ 560 (781)
=+-|.+ +|.. .|+ ..+.|-+ =+|.-.+.+.... .
T Consensus 144 lPFE~~-------------------~y~k-~g~-----~~~yVGHpl~d~i~~~~~r~~--------------------a 178 (381)
T COG0763 144 LPFEPA-------------------FYDK-FGL-----PCTYVGHPLADEIPLLPDREA--------------------A 178 (381)
T ss_pred cCCCHH-------------------HHHh-cCC-----CeEEeCChhhhhccccccHHH--------------------H
Confidence 877654 1211 111 2344433 3343323333322 1
Q ss_pred ccccCCCCCCCCCEE-EEEee-ccC-CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc
Q 003985 561 DEHVGTLSDRSKPIV-FSMAR-LDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY 637 (781)
Q Consensus 561 ~~~~g~l~~~~k~iI-l~vGR-L~~-~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el 637 (781)
++.+|+ +.+++++ +..|. -.+ .+....+++++.+++.+.|+.++++--.... .+.+.....+.
T Consensus 179 r~~l~~--~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~------------~~~~~~~~~~~ 244 (381)
T COG0763 179 REKLGI--DADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAK------------YRRIIEEALKW 244 (381)
T ss_pred HHHhCC--CCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHH------------HHHHHHHHhhc
Confidence 245777 5555554 44443 333 5566778889999998999999998776543 22333333222
Q ss_pred C-CCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC
Q 003985 638 K-LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (781)
Q Consensus 638 ~-L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~ 696 (781)
. ....+... .++-+..++ +||+.+..| |.+.+|+|.+|+|.|.+.
T Consensus 245 ~~~~~~~~~~--------~~~~~~a~~-~aD~al~aS-----GT~tLE~aL~g~P~Vv~Y 290 (381)
T COG0763 245 EVAGLSLILI--------DGEKRKAFA-AADAALAAS-----GTATLEAALAGTPMVVAY 290 (381)
T ss_pred cccCceEEec--------CchHHHHHH-HhhHHHHhc-----cHHHHHHHHhCCCEEEEE
Confidence 2 11223333 235566777 489877765 999999999999999873
No 130
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.34 E-value=0.0035 Score=71.88 Aligned_cols=183 Identities=12% Similarity=0.108 Sum_probs=126.8
Q ss_pred cccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC-
Q 003985 562 EHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD- 640 (781)
Q Consensus 562 ~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~- 640 (781)
...|+ +++..++++.++ ..|-...+++-+.++.+..|+-.|++-|+|++ .+....+++++++.|+.
T Consensus 422 ~~lgl--p~~avVf~c~~n--~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~---------~~~~~~l~~la~~~Gv~~ 488 (620)
T COG3914 422 AQLGL--PEDAVVFCCFNN--YFKITPEVFALWMQILSAVPNSVLLLKAGGDD---------AEINARLRDLAEREGVDS 488 (620)
T ss_pred hhcCC--CCCeEEEEecCC--cccCCHHHHHHHHHHHHhCCCcEEEEecCCCc---------HHHHHHHHHHHHHcCCCh
Confidence 45788 556555555554 45556667776667777789999999999865 25578899999999984
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc-------Cccccccccc-cCCeEEE
Q 003985 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-------CHGGPAEIIE-HGASGFH 712 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT-------~~GG~~EiI~-dg~~G~l 712 (781)
++++|.+ +.++++....+. -+|+++=+--|-| +.|.+||+-+|+||++- +.|+. ++. -|..-++
T Consensus 489 eRL~f~p----~~~~~~h~a~~~-iADlvLDTyPY~g-~TTa~daLwm~vPVlT~~G~~FasR~~~s--i~~~agi~e~v 560 (620)
T COG3914 489 ERLRFLP----PAPNEDHRARYG-IADLVLDTYPYGG-HTTASDALWMGVPVLTRVGEQFASRNGAS--IATNAGIPELV 560 (620)
T ss_pred hheeecC----CCCCHHHHHhhc-hhheeeecccCCC-ccchHHHHHhcCceeeeccHHHHHhhhHH--HHHhcCCchhh
Confidence 7999999 666777777777 4999887755444 67899999999999874 34432 222 2444444
Q ss_pred ECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHh
Q 003985 713 IDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINV 771 (781)
Q Consensus 713 v~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll~~ 771 (781)
.+ +.++..++-..|- .|...+++.+..-.+.....==|+....++..|.++..
T Consensus 561 A~--s~~dYV~~av~~g----~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~ 613 (620)
T COG3914 561 AD--SRADYVEKAVAFG----SDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWG 613 (620)
T ss_pred cC--CHHHHHHHHHHhc----ccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHH
Confidence 44 6677777666654 78888888777655444332237766777777777654
No 131
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=97.20 E-value=0.0044 Score=61.81 Aligned_cols=110 Identities=21% Similarity=0.282 Sum_probs=62.1
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEE----EecCCccccCCCChhhHhhhhccccchhhhhHHHH
Q 003985 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCT----IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLI 470 (781)
Q Consensus 396 ~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~-gvp~v~----t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~ 470 (781)
+...+++. +..||||++|...|..+ .++.-. ++|++. ..|+-...-.-+... -...+...+...+......
T Consensus 56 a~~~L~~~-Gf~PDvI~~H~GWGe~L--flkdv~P~a~li~Y~E~~y~~~g~d~~FDpe~-p~~~~~~~~~r~rN~~~l~ 131 (171)
T PF12000_consen 56 AARQLRAQ-GFVPDVIIAHPGWGETL--FLKDVFPDAPLIGYFEFYYRASGADVGFDPEF-PPSLDDRARLRMRNAHNLL 131 (171)
T ss_pred HHHHHHHc-CCCCCEEEEcCCcchhh--hHHHhCCCCcEEEEEEEEecCCCCcCCCCCCC-CCCHHHHHHHHHHhHHHHH
Confidence 44444444 66899999999887332 233333 677663 222211110000000 0111222233333445667
Q ss_pred HHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCC
Q 003985 471 AMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIY 533 (781)
Q Consensus 471 a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f 533 (781)
.+..||..|+.|...+. +| |. .+.+|+.||+-|||++.+
T Consensus 132 ~l~~~D~~isPT~wQ~~-------~f--------P~---------~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 132 ALEQADAGISPTRWQRS-------QF--------PA---------EFRSKISVIHDGIDTDRF 170 (171)
T ss_pred HHHhCCcCcCCCHHHHH-------hC--------CH---------HHHcCcEEeecccchhhc
Confidence 88999999999987654 22 22 236799999999999765
No 132
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=97.20 E-value=0.11 Score=59.39 Aligned_cols=97 Identities=13% Similarity=0.157 Sum_probs=58.5
Q ss_pred HHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCc----ccccccccc
Q 003985 631 HELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEIIEH 706 (781)
Q Consensus 631 ~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~----GG~~EiI~d 706 (781)
+++.+.+.-..+++.+.. .....|+..+++. +|++|-.-+ -.++=|++.|+|+|+-.. -|..+-+
T Consensus 297 ~~l~~~~~~~~~~~vi~~---~~~~~e~~~iIs~-~dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~l-- 365 (426)
T PRK10017 297 LNLRQHVSDPARYHVVMD---ELNDLEMGKILGA-CELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQL-- 365 (426)
T ss_pred HHHHHhcccccceeEecC---CCChHHHHHHHhh-CCEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHc--
Confidence 344444443445555431 2345688899995 998887643 367889999999999743 3343433
Q ss_pred CCeEEEEC--CCCHHHHHHHHHHHHHhccCCHHHHHHH
Q 003985 707 GASGFHID--PYHPDQAAELMADFFGKCKENPSHWKKI 742 (781)
Q Consensus 707 g~~G~lv~--p~d~e~lA~~I~~~l~~l~~dp~~~~~~ 742 (781)
|...++++ .-+.+++.+++.+++ ++.+.+++.
T Consensus 366 g~~~~~~~~~~l~~~~Li~~v~~~~----~~r~~~~~~ 399 (426)
T PRK10017 366 GLPEMAIDIRHLLDGSLQAMVADTL----GQLPALNAR 399 (426)
T ss_pred CCccEEechhhCCHHHHHHHHHHHH----hCHHHHHHH
Confidence 22334444 335667888876665 666544443
No 133
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=97.11 E-value=0.011 Score=71.46 Aligned_cols=150 Identities=14% Similarity=0.091 Sum_probs=107.5
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHH----HHHHHHHhhccC----CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003985 563 HVGTLSDRSKPIVFSMARLDHVKNMTG----LVECYGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~----LieA~~~l~~~~----~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 634 (781)
..|+..+++...++++-|+..+|.... .++-+.++++.. ....+++.|...+ .|......++.+..++
T Consensus 521 ~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 596 (797)
T cd04300 521 TTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAP----GYYMAKLIIKLINAVA 596 (797)
T ss_pred HhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCC----CcHHHHHHHHHHHHHH
Confidence 356666889999999999999999888 455566665431 1255555555433 3445556666677766
Q ss_pred HHc----CCCC--cEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003985 635 KTY----KLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (781)
Q Consensus 635 ~el----~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~d 706 (781)
+.. .+.+ +|.|+. .... .+.+.+-.++|+-.+-|. .|+.|..=+=+|.-|.++++|-.|...|+.++
T Consensus 597 ~~in~Dp~v~~~lkVVFle----nY~V-slAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~ 671 (797)
T cd04300 597 DVVNNDPDVGDKLKVVFLP----NYNV-SLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEE 671 (797)
T ss_pred HHhccChhcCCceEEEEeC----CCCh-HHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHH
Confidence 632 2344 688886 3333 344444447999999875 89999999999999999999999999999987
Q ss_pred --CCeEEEECCCCHHHHH
Q 003985 707 --GASGFHIDPYHPDQAA 722 (781)
Q Consensus 707 --g~~G~lv~p~d~e~lA 722 (781)
++|+|+|-. +.++..
T Consensus 672 vG~eN~fiFG~-~~~ev~ 688 (797)
T cd04300 672 VGEENIFIFGL-TAEEVE 688 (797)
T ss_pred hCcCcEEEeCC-CHHHHH
Confidence 889999964 455544
No 134
>PLN02208 glycosyltransferase family protein
Probab=97.10 E-value=0.58 Score=53.92 Aligned_cols=66 Identities=6% Similarity=0.028 Sum_probs=44.0
Q ss_pred cHHHHHHHHcCCcEEEc----Ccccccccccc-CCeEEEECC-----CCHHHHHHHHHHHHHhccCCH-HHHHHHHHHHH
Q 003985 679 GLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHIDP-----YHPDQAAELMADFFGKCKENP-SHWKKISDGGL 747 (781)
Q Consensus 679 GltvlEAMa~GlPVIaT----~~GG~~EiI~d-g~~G~lv~p-----~d~e~lA~~I~~~l~~l~~dp-~~~~~~s~~a~ 747 (781)
-++++||+++|+|+|+- +....+..+.+ -+.|..++. -+.++++++|.+++ .++ +..+++.+++.
T Consensus 339 ~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m----~~~~e~g~~~r~~~~ 414 (442)
T PLN02208 339 PGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVM----DKDSDLGKLVRSNHT 414 (442)
T ss_pred chHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHh----cCCchhHHHHHHHHH
Confidence 36899999999999996 33334444443 467877754 26778888888776 554 34455555554
Q ss_pred H
Q 003985 748 K 748 (781)
Q Consensus 748 ~ 748 (781)
+
T Consensus 415 ~ 415 (442)
T PLN02208 415 K 415 (442)
T ss_pred H
Confidence 3
No 135
>PLN03007 UDP-glucosyltransferase family protein
Probab=97.05 E-value=0.59 Score=54.45 Aligned_cols=78 Identities=10% Similarity=0.102 Sum_probs=46.4
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCc--EEEEcCCCCCCcHHHHHHHHcCCcEEEcC----cccccccccc-CCeEEE
Q 003985 640 DGQFRWIAAQTNRARNGELYRYIADTKG--AFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEH-GASGFH 712 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aad--vfV~PS~~E~fGltvlEAMa~GlPVIaT~----~GG~~EiI~d-g~~G~l 712 (781)
..++...+ +++..++.. ..+ +||.= +--++++||+++|+|+|+.- ..-.+..+.+ -..|+-
T Consensus 344 ~~g~~v~~----w~PQ~~iL~----h~~v~~fvtH----~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~ 411 (482)
T PLN03007 344 GKGLIIRG----WAPQVLILD----HQATGGFVTH----CGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVS 411 (482)
T ss_pred cCCEEEec----CCCHHHHhc----cCccceeeec----CcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeE
Confidence 34677777 555555554 343 35553 22458999999999999973 3333332221 123443
Q ss_pred EC----------CCCHHHHHHHHHHHH
Q 003985 713 ID----------PYHPDQAAELMADFF 729 (781)
Q Consensus 713 v~----------p~d~e~lA~~I~~~l 729 (781)
+. .-+.+++++++.+++
T Consensus 412 ~~~~~~~~~~~~~~~~~~l~~av~~~m 438 (482)
T PLN03007 412 VGAKKLVKVKGDFISREKVEKAVREVI 438 (482)
T ss_pred eccccccccccCcccHHHHHHHHHHHh
Confidence 31 136788888888776
No 136
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.03 E-value=0.027 Score=62.09 Aligned_cols=109 Identities=12% Similarity=0.128 Sum_probs=82.1
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCC---CCC---CcHHHHHHHHcCCcEEEcCccccccccccCCeEEEEC
Q 003985 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF---YEA---FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHID 714 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~---~E~---fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~ 714 (781)
+++..+|+.. +...+..++.. .++++.=++ .++ +.+-+.|+|+||.|.+++...+..-.+.+|+.=.+..
T Consensus 237 ~~~~yIg~~~---~~~~v~~~~~~-~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~~ 312 (373)
T COG4641 237 PNVQYIGYYN---PKDGVPNAFKR-DDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVYQ 312 (373)
T ss_pred chhhhhhccC---ccchhhhcccc-cceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEec
Confidence 4566666322 22556666663 666665432 222 3778999999999999998888888888887655554
Q ss_pred CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003985 715 PYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 715 p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~ 759 (781)
|..++++++..++ ..++.++++.+.|.+++...||.+..
T Consensus 313 --d~kdl~~~~~yll----~h~~erkeiae~~ye~V~~~ht~~~r 351 (373)
T COG4641 313 --DSKDLKEKLKYLL----NHPDERKEIAECAYERVLARHTYEER 351 (373)
T ss_pred --CHHHHHHHHHHHh----cCcchHHHHHHhhHHHHHHhccHHHH
Confidence 8999999997777 89999999999999999999988654
No 137
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.02 E-value=0.18 Score=56.05 Aligned_cols=256 Identities=14% Similarity=0.207 Sum_probs=149.9
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCH
Q 003985 405 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 483 (781)
Q Consensus 405 ~~~pDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 483 (781)
..+||+|..|.-.. .++++++|...++|++..-=++- ..+.+|.. . + .....-.-||.-++.|.
T Consensus 90 ~~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlR-----t~~~~~PE--E-~-------NR~l~~~~S~~hfapte 154 (383)
T COG0381 90 EEKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLR-----TGDLYFPE--E-I-------NRRLTSHLSDLHFAPTE 154 (383)
T ss_pred hhCCCEEEEeCCcchHHHHHHHHHHhCCceEEEecccc-----cCCCCCcH--H-H-------HHHHHHHhhhhhcCChH
Confidence 34999998887544 56779999999999876533321 11111110 0 0 01123334666778887
Q ss_pred HHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCC-cCCCCCCCcHHHHHHhhhhcchhhhccCcccccc
Q 003985 484 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (781)
Q Consensus 484 ~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGv-D~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~ 562 (781)
..++.+. .-|++ ..++.|+-|-+ |.-.+.. .+. .+ +...
T Consensus 155 ~ar~nLl--------------------~EG~~--~~~IfvtGnt~iDal~~~~-----~~~-------~~------~~~~ 194 (383)
T COG0381 155 IARKNLL--------------------REGVP--EKRIFVTGNTVIDALLNTR-----DRV-------LE------DSKI 194 (383)
T ss_pred HHHHHHH--------------------HcCCC--ccceEEeCChHHHHHHHHH-----hhh-------cc------chhh
Confidence 6654221 12444 56788887743 2110000 000 00 0000
Q ss_pred ccCCCCCCC-CCEEEEEeeccC-CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH-HHcCC
Q 003985 563 HVGTLSDRS-KPIVFSMARLDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM-KTYKL 639 (781)
Q Consensus 563 ~~g~l~~~~-k~iIl~vGRL~~-~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li-~el~L 639 (781)
...++.+.+ +.++++.=|-.. .+++..+++++.++.+.++++.++.--.- . ..+++.. +.++-
T Consensus 195 ~~~~~~~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~-~-------------~~v~e~~~~~L~~ 260 (383)
T COG0381 195 LAKGLDDKDKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHP-R-------------PRVRELVLKRLKN 260 (383)
T ss_pred HHhhhccccCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCC-C-------------hhhhHHHHHHhCC
Confidence 000011233 445556655544 39999999999999988877665543332 1 2344444 55666
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-ccccccccccCCeEEEECCCCH
Q 003985 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGGPAEIIEHGASGFHIDPYHP 718 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~-~GG~~EiI~dg~~G~lv~p~d~ 718 (781)
.++|..+. ++...+...++.. | .+++. ..|-..=||-..|+||+.-+ .-.-+|.++.| +-.++. .|.
T Consensus 261 ~~~v~li~----pl~~~~f~~L~~~-a-~~ilt----DSGgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lvg-~~~ 328 (383)
T COG0381 261 VERVKLID----PLGYLDFHNLMKN-A-FLILT----DSGGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILVG-TDE 328 (383)
T ss_pred CCcEEEeC----CcchHHHHHHHHh-c-eEEEe----cCCchhhhHHhcCCcEEeeccCCCCccceecC-ceEEeC-ccH
Confidence 66799987 7778888888875 5 33333 12666789999999999975 44566666443 444554 477
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHH
Q 003985 719 DQAAELMADFFGKCKENPSHWKKISDG 745 (781)
Q Consensus 719 e~lA~~I~~~l~~l~~dp~~~~~~s~~ 745 (781)
+.+.+++..++ ++++..++|+..
T Consensus 329 ~~i~~~~~~ll----~~~~~~~~m~~~ 351 (383)
T COG0381 329 ENILDAATELL----EDEEFYERMSNA 351 (383)
T ss_pred HHHHHHHHHHh----hChHHHHHHhcc
Confidence 88888887776 888888877653
No 138
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=96.96 E-value=0.017 Score=69.10 Aligned_cols=143 Identities=16% Similarity=0.131 Sum_probs=108.8
Q ss_pred cCCCCCCCCCEEEEEeeccCCCChHHHH----HHHHHhh-ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC
Q 003985 564 VGTLSDRSKPIVFSMARLDHVKNMTGLV----ECYGKNS-QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK 638 (781)
Q Consensus 564 ~g~l~~~~k~iIl~vGRL~~~Kgl~~Li----eA~~~l~-~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~ 638 (781)
.|+..+++...++++-|+.++|..+..+ ..+..++ ...|.+.+++.|...+ .|....+.++.+...++..+
T Consensus 479 ~gi~~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP----~y~~aK~iIk~I~~~a~~in 554 (750)
T COG0058 479 TGIEVDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHP----ADYAAKEIIKLINDVADVIN 554 (750)
T ss_pred cCCccCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCC----cchHHHHHHHHHHHHHHhhc
Confidence 4555578899999999999999887764 3444454 3345555555565443 45566677788888888877
Q ss_pred CCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCccccccccc--cCCeEEEEC
Q 003985 639 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIE--HGASGFHID 714 (781)
Q Consensus 639 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~--dg~~G~lv~ 714 (781)
...+|.|+. ..+. .+.+.+-.++|+=.+-|. .|+.|.+-+=||.-|.++|+|-.|...|+.+ ++.|||+|-
T Consensus 555 ~~lkVvFl~----nYdv-slA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG 629 (750)
T COG0058 555 NKLKVVFLP----NYDV-SLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFG 629 (750)
T ss_pred ccceEEEeC----CCCh-hHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeC
Confidence 667899997 3333 445555557999988775 7999999999999999999999999999997 899999995
Q ss_pred C
Q 003985 715 P 715 (781)
Q Consensus 715 p 715 (781)
.
T Consensus 630 ~ 630 (750)
T COG0058 630 E 630 (750)
T ss_pred C
Confidence 4
No 139
>PLN02554 UDP-glycosyltransferase family protein
Probab=96.89 E-value=0.71 Score=53.82 Aligned_cols=88 Identities=16% Similarity=0.119 Sum_probs=52.2
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC----ccccc-cccccCCeEEEECC
Q 003985 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPA-EIIEHGASGFHIDP 715 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~----~GG~~-EiI~dg~~G~lv~p 715 (781)
+++.+.+ +++..++... . +.++||.= +--.+++||+.+|+|+|+.- ....+ .+++.-+.|..++.
T Consensus 342 ~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH----~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~ 411 (481)
T PLN02554 342 DIGKVIG----WAPQVAVLAK-P-AIGGFVTH----CGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRK 411 (481)
T ss_pred cCceEEe----eCCHHHHhCC-c-ccCccccc----CccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeec
Confidence 4555556 5555555531 1 24445543 22358999999999999973 33344 34544456776641
Q ss_pred -------------CCHHHHHHHHHHHHHhccCCHHHHHH
Q 003985 716 -------------YHPDQAAELMADFFGKCKENPSHWKK 741 (781)
Q Consensus 716 -------------~d~e~lA~~I~~~l~~l~~dp~~~~~ 741 (781)
-+.++++++|.+++. .+++++++
T Consensus 412 ~~~~~~~~~~~~~~~~e~l~~av~~vm~---~~~~~r~~ 447 (481)
T PLN02554 412 YWRGDLLAGEMETVTAEEIERGIRCLME---QDSDVRKR 447 (481)
T ss_pred cccccccccccCeEcHHHHHHHHHHHhc---CCHHHHHH
Confidence 267788888877762 25555544
No 140
>PLN02173 UDP-glucosyl transferase family protein
Probab=96.84 E-value=1.4 Score=50.83 Aligned_cols=94 Identities=13% Similarity=0.139 Sum_probs=57.7
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC-CeEEEEC
Q 003985 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHID 714 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT----~~GG~~EiI~dg-~~G~lv~ 714 (781)
.+++.+.+ +++..++...= +.++||.= +-.++++||+++|+|+|+- +..-....+++. +.|.-+.
T Consensus 316 ~~~~~i~~----W~PQ~~iL~H~--~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~ 385 (449)
T PLN02173 316 KDKSLVLK----WSPQLQVLSNK--AIGCFMTH----CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVK 385 (449)
T ss_pred CCceEEeC----CCCHHHHhCCC--ccceEEec----CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEe
Confidence 35677777 56655555421 12355543 2357999999999999997 344455556553 5676664
Q ss_pred CC------CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Q 003985 715 PY------HPDQAAELMADFFGKCKENPSHWKKISDGGLK 748 (781)
Q Consensus 715 p~------d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~ 748 (781)
.. +.+++++++.+++ .+++ .+++.+++.+
T Consensus 386 ~~~~~~~~~~e~v~~av~~vm----~~~~-~~~~r~~a~~ 420 (449)
T PLN02173 386 AEKESGIAKREEIEFSIKEVM----EGEK-SKEMKENAGK 420 (449)
T ss_pred ecccCCcccHHHHHHHHHHHh----cCCh-HHHHHHHHHH
Confidence 21 5788999998877 4533 2444444433
No 141
>PLN02562 UDP-glycosyltransferase
Probab=96.83 E-value=1.1 Score=51.73 Aligned_cols=139 Identities=12% Similarity=0.082 Sum_probs=80.6
Q ss_pred CCCEEEEEeecc---CCCChHHHHHHHHHhhccCCCeEEEE-EeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003985 571 SKPIVFSMARLD---HVKNMTGLVECYGKNSQLRELVNLVV-VAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (781)
Q Consensus 571 ~k~iIl~vGRL~---~~Kgl~~LieA~~~l~~~~~~~~LvI-VG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~fl 646 (781)
+..++++.|.+. ..+-+..++.+++++. .++++ +..+.. . ...+...+ + +.+++...
T Consensus 273 ~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g-----~~fiW~~~~~~~---~------~l~~~~~~---~--~~~~~~v~ 333 (448)
T PLN02562 273 NSVIYISFGSWVSPIGESNVRTLALALEASG-----RPFIWVLNPVWR---E------GLPPGYVE---R--VSKQGKVV 333 (448)
T ss_pred CceEEEEecccccCCCHHHHHHHHHHHHHCC-----CCEEEEEcCCch---h------hCCHHHHH---H--hccCEEEE
Confidence 345778888864 3444556666666553 24443 332111 0 00001111 1 23567777
Q ss_pred ccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CCeEEEECCCCHHHH
Q 003985 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHIDPYHPDQA 721 (781)
Q Consensus 647 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT----~~GG~~EiI~d-g~~G~lv~p~d~e~l 721 (781)
+ +++..++... . +.++||.= +--.+++||+.+|+|+|+. |....+..+.+ -+.|+-+..-+.+++
T Consensus 334 ~----w~PQ~~iL~h-~-~v~~fvtH----~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~l 403 (448)
T PLN02562 334 S----WAPQLEVLKH-Q-AVGCYLTH----CGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKEV 403 (448)
T ss_pred e----cCCHHHHhCC-C-ccceEEec----CcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHHHH
Confidence 6 5666666652 1 13345543 2246899999999999986 44455555554 356777755678899
Q ss_pred HHHHHHHHHhccCCHHHHHHH
Q 003985 722 AELMADFFGKCKENPSHWKKI 742 (781)
Q Consensus 722 A~~I~~~l~~l~~dp~~~~~~ 742 (781)
+++|.+++ .|++++++.
T Consensus 404 ~~~v~~~l----~~~~~r~~a 420 (448)
T PLN02562 404 EEGLRKVM----EDSGMGERL 420 (448)
T ss_pred HHHHHHHh----CCHHHHHHH
Confidence 99998877 677665543
No 142
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=96.71 E-value=0.17 Score=54.92 Aligned_cols=171 Identities=9% Similarity=0.053 Sum_probs=113.5
Q ss_pred CCEEEEEeec-cCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003985 572 KPIVFSMARL-DHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (781)
Q Consensus 572 k~iIl~vGRL-~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~ 650 (781)
.++.+-+|+= |+-.++..+++++.+... .++++++.=+-|. ...+|++++.+..+++--.++++.+.
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~~--~~v~ii~PlsYp~-------gn~~Yi~~V~~~~~~lF~~~~~~~L~--- 212 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQFG--DNVKIIVPMGYPA-------NNQAYIEEVRQAGLALFGAENFQILT--- 212 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHhC--CCeEEEEECCcCC-------CCHHHHHHHHHHHHHhcCcccEEehh---
Confidence 3555566664 567778888888877643 5788887766653 23478899999999887657888887
Q ss_pred CcCChHHHHHHHHccCcEEEEcC-CCCCCcHHHHHHHHcCCcEEEc-CccccccccccCCeEEEECCCCHHHHHHHHHHH
Q 003985 651 NRARNGELYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYHPDQAAELMADF 728 (781)
Q Consensus 651 ~~v~~~el~~~la~aadvfV~PS-~~E~fGltvlEAMa~GlPVIaT-~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~ 728 (781)
+.++-+|...+++. +|+.++-- +.+|.|.. +=.+..|+||+.+ +..-..++.+.|.. ++++.++ +-..+.
T Consensus 213 e~l~f~eYl~lL~~-~Dl~~f~~~RQQgiGnl-~lLi~~G~~v~l~r~n~fwqdl~e~gv~-Vlf~~d~---L~~~~v-- 284 (322)
T PRK02797 213 EKLPFDDYLALLRQ-CDLGYFIFARQQGIGTL-CLLIQLGKPVVLSRDNPFWQDLTEQGLP-VLFTGDD---LDEDIV-- 284 (322)
T ss_pred hhCCHHHHHHHHHh-CCEEEEeechhhHHhHH-HHHHHCCCcEEEecCCchHHHHHhCCCe-EEecCCc---ccHHHH--
Confidence 47788999999995 99988764 67888855 4578999999998 45666666655543 3333322 222211
Q ss_pred HHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHhcC
Q 003985 729 FGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINVIS 773 (781)
Q Consensus 729 l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll~~~~ 773 (781)
.+..+++....++.+. |+- ...++.|.+++..-+
T Consensus 285 -------~e~~rql~~~dk~~I~--Ff~--pn~~~~W~~~l~~~~ 318 (322)
T PRK02797 285 -------REAQRQLASVDKNIIA--FFS--PNYLQGWRNALAIAA 318 (322)
T ss_pred -------HHHHHHHHhhCcceee--ecC--HhHHHHHHHHHHHhh
Confidence 1222344444555553 544 467788888886543
No 143
>PLN02670 transferase, transferring glycosyl groups
Probab=96.53 E-value=2 Score=49.96 Aligned_cols=77 Identities=14% Similarity=0.158 Sum_probs=49.5
Q ss_pred EEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccCCeEEEECC---
Q 003985 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHGASGFHIDP--- 715 (781)
Q Consensus 643 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT----~~GG~~EiI~dg~~G~lv~p--- 715 (781)
+.+.+ +++..++... . +.++||.= +--++++||+++|+|+|+. +....+..++.-+.|..++.
T Consensus 341 ~vv~~----W~PQ~~IL~H-~-~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~ 410 (472)
T PLN02670 341 MIHVG----WVPQVKILSH-E-SVGGFLTH----CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDER 410 (472)
T ss_pred eEEeC----cCCHHHHhcC-c-ccceeeec----CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeecccc
Confidence 45555 4555555542 1 12235443 2246899999999999997 44445555566678888753
Q ss_pred ---CCHHHHHHHHHHHH
Q 003985 716 ---YHPDQAAELMADFF 729 (781)
Q Consensus 716 ---~d~e~lA~~I~~~l 729 (781)
-+.++++++|.+++
T Consensus 411 ~~~~~~e~i~~av~~vm 427 (472)
T PLN02670 411 DGSFTSDSVAESVRLAM 427 (472)
T ss_pred CCcCcHHHHHHHHHHHh
Confidence 25788888888777
No 144
>PRK14986 glycogen phosphorylase; Provisional
Probab=96.47 E-value=0.023 Score=68.75 Aligned_cols=151 Identities=13% Similarity=0.116 Sum_probs=110.1
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHH-HHH---HHHHhhccC----CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003985 563 HVGTLSDRSKPIVFSMARLDHVKNMTG-LVE---CYGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~-Lie---A~~~l~~~~----~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 634 (781)
..|...+++...++++-|+..+|.... ++. -+.++++.- ....+++.|...+ .|......++.+.+++
T Consensus 534 ~~g~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIk~I~~va 609 (815)
T PRK14986 534 QLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAAS----AYYMAKHIIHLINDVA 609 (815)
T ss_pred HhCCccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCC----CcHHHHHHHHHHHHHH
Confidence 347666888999999999999999888 544 455555431 1356666665543 3455566777777777
Q ss_pred H----HcCCCC--cEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003985 635 K----TYKLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (781)
Q Consensus 635 ~----el~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~d 706 (781)
+ +-.+.+ +|.|+. .... .+.+.+-.++|+-.+-|. .|+.|..=+=||.-|.++++|-.|...|+.++
T Consensus 610 ~~in~Dp~v~~~lkVVFle----nY~v-slAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~ 684 (815)
T PRK14986 610 KVINNDPQIGDKLKVVFIP----NYSV-SLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEH 684 (815)
T ss_pred HHhccChhhcCceeEEEeC----CCCH-HHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHh
Confidence 6 222344 788886 3333 445555557999999875 89999999999999999999999999999986
Q ss_pred --CCeEEEECCCCHHHHHH
Q 003985 707 --GASGFHIDPYHPDQAAE 723 (781)
Q Consensus 707 --g~~G~lv~p~d~e~lA~ 723 (781)
++|||.|-. +.++..+
T Consensus 685 vG~eN~~~fG~-~~~ev~~ 702 (815)
T PRK14986 685 VGEENIFIFGN-TAEEVEA 702 (815)
T ss_pred cCCCcEEEeCC-CHHHHHH
Confidence 889999964 5555544
No 145
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=96.36 E-value=2.9 Score=48.39 Aligned_cols=92 Identities=12% Similarity=0.146 Sum_probs=57.4
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC-CeEEEEC-
Q 003985 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHID- 714 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT----~~GG~~EiI~dg-~~G~lv~- 714 (781)
++....+ +++..++... . +.++||.=. --++++||+++|+|+|+. |....+..+.+. +.|+.+.
T Consensus 324 ~~g~v~~----w~PQ~~iL~h-~-~v~~fvtH~----G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~ 393 (451)
T PLN02410 324 GRGYIVK----WAPQKEVLSH-P-AVGGFWSHC----GWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEG 393 (451)
T ss_pred CCeEEEc----cCCHHHHhCC-C-ccCeeeecC----chhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCC
Confidence 5566666 6666666652 1 134466542 235899999999999996 444455555444 5777763
Q ss_pred CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 003985 715 PYHPDQAAELMADFFGKCKENPSHWKKISDGGL 747 (781)
Q Consensus 715 p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~ 747 (781)
.-+.++++++|.+++ .+++ .+++.++++
T Consensus 394 ~~~~~~v~~av~~lm----~~~~-~~~~r~~a~ 421 (451)
T PLN02410 394 DLDRGAVERAVKRLM----VEEE-GEEMRKRAI 421 (451)
T ss_pred cccHHHHHHHHHHHH----cCCc-HHHHHHHHH
Confidence 347788999998877 5543 334444443
No 146
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=96.34 E-value=0.1 Score=55.45 Aligned_cols=140 Identities=19% Similarity=0.276 Sum_probs=81.3
Q ss_pred CCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003985 571 SKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (781)
Q Consensus 571 ~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~ 650 (781)
.+-+++++|.=|+ ||++. +.++.+.+. ++++.||-+...| ....+++.++++ +++.+.-.
T Consensus 158 ~r~ilI~lGGsDp-k~lt~--kvl~~L~~~--~~nl~iV~gs~~p----------~l~~l~k~~~~~---~~i~~~~~-- 217 (318)
T COG3980 158 KRDILITLGGSDP-KNLTL--KVLAELEQK--NVNLHIVVGSSNP----------TLKNLRKRAEKY---PNINLYID-- 217 (318)
T ss_pred hheEEEEccCCCh-hhhHH--HHHHHhhcc--CeeEEEEecCCCc----------chhHHHHHHhhC---CCeeeEec--
Confidence 3447788886554 66554 333334332 3666555543221 144555555544 77888752
Q ss_pred CcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCc--EE--EcCcccccccccc----CCeEEEECCCCHHHHH
Q 003985 651 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP--TF--ATCHGGPAEIIEH----GASGFHIDPYHPDQAA 722 (781)
Q Consensus 651 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP--VI--aT~~GG~~EiI~d----g~~G~lv~p~d~e~lA 722 (781)
..++.+++.+ +|..+..+ |.|+.||...|+| |+ +.+.-..+.-.+. -+.|++. ...+..
T Consensus 218 ----~~dma~LMke-~d~aI~Aa-----GstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~l---~~~~~~ 284 (318)
T COG3980 218 ----TNDMAELMKE-ADLAISAA-----GSTLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYHL---KDLAKD 284 (318)
T ss_pred ----chhHHHHHHh-cchheecc-----chHHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCCC---chHHHH
Confidence 4468888886 88777653 8999999999999 33 2332222222211 2345553 234555
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHH
Q 003985 723 ELMADFFGKCKENPSHWKKISDGGL 747 (781)
Q Consensus 723 ~~I~~~l~~l~~dp~~~~~~s~~a~ 747 (781)
..+.++. .|+..+..++..+.
T Consensus 285 ~~~~~i~----~d~~~rk~l~~~~~ 305 (318)
T COG3980 285 YEILQIQ----KDYARRKNLSFGSK 305 (318)
T ss_pred HHHHHhh----hCHHHhhhhhhccc
Confidence 5554444 88888887776544
No 147
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=96.32 E-value=0.016 Score=50.88 Aligned_cols=71 Identities=17% Similarity=0.086 Sum_probs=49.9
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcEEEEe
Q 003985 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQCTIA 437 (781)
Q Consensus 360 ~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~--~lva~llar~~gvp~v~t~ 437 (781)
.+.+++.+|+... -.....|.+-....-+...+. +++.||||+|.+.+ .--+.+.|+.+|++.|+|-
T Consensus 14 ngLKVYYlP~~~~--------~~~~t~Pt~~~~~pl~R~Ili---rE~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfTD 82 (90)
T PF08288_consen 14 NGLKVYYLPLKVF--------YNQCTLPTLFGSFPLLRNILI---RERIDIVHGHQAFSTLCHEAILHARTMGLKTVFTD 82 (90)
T ss_pred CCeEEEeecchhh--------hcCcchHHHHHhhHHHHHHHH---HcCeeEEEeehhhhHHHHHHHHHHHhCCCcEEeec
Confidence 4789999999863 223344544333333333333 34899999999876 4568889999999999999
Q ss_pred cCCc
Q 003985 438 HALE 441 (781)
Q Consensus 438 H~l~ 441 (781)
|++.
T Consensus 83 HSLf 86 (90)
T PF08288_consen 83 HSLF 86 (90)
T ss_pred cccc
Confidence 9874
No 148
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=96.27 E-value=0.39 Score=52.78 Aligned_cols=121 Identities=12% Similarity=0.058 Sum_probs=86.7
Q ss_pred CCEEEEEee-ccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003985 572 KPIVFSMAR-LDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (781)
Q Consensus 572 k~iIl~vGR-L~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~ 650 (781)
++.-+-+|+ =++..++-.+++++.+.. ..++++++-=+.+. ...+|++++.+.++++--.+++..+.
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~--~~~~kIivPLsYg~-------~n~~Yi~~V~~~~~~lF~~~~~~iL~--- 251 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQF--GDDVKIIVPLSYGA-------NNQAYIQQVIQAGKELFGAENFQILT--- 251 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhc--CCCeEEEEECCCCC-------chHHHHHHHHHHHHHhcCccceeEhh---
Confidence 444455665 456777888888777643 35677766554443 13478888999998886566788775
Q ss_pred CcCChHHHHHHHHccCcEEEEcC-CCCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003985 651 NRARNGELYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (781)
Q Consensus 651 ~~v~~~el~~~la~aadvfV~PS-~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~d 706 (781)
+.++-+|..++++. +|+.++.. +..|.|. ++=.+.+|+||+.+.....-....+
T Consensus 252 e~mpf~eYl~lL~~-cDl~if~~~RQQgiGn-I~lLl~~G~~v~L~~~np~~~~l~~ 306 (360)
T PF07429_consen 252 EFMPFDEYLALLSR-CDLGIFNHNRQQGIGN-ICLLLQLGKKVFLSRDNPFWQDLKE 306 (360)
T ss_pred hhCCHHHHHHHHHh-CCEEEEeechhhhHhH-HHHHHHcCCeEEEecCChHHHHHHh
Confidence 47889999999995 99999987 5788885 5557999999999965555444443
No 149
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=96.23 E-value=0.78 Score=50.45 Aligned_cols=134 Identities=15% Similarity=0.196 Sum_probs=75.5
Q ss_pred CCCCEEEEEeeccCCCChHHH---HHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003985 570 RSKPIVFSMARLDHVKNMTGL---VECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (781)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgl~~L---ieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~fl 646 (781)
.+..+++++|. -.-|-+.+ ++|+..+....+ .-++|.|..-. .+..+++.....-.++|...
T Consensus 218 E~~~Ilvs~GG--G~dG~eLi~~~l~A~~~l~~l~~-~~~ivtGP~MP------------~~~r~~l~~~A~~~p~i~I~ 282 (400)
T COG4671 218 EGFDILVSVGG--GADGAELIETALAAAQLLAGLNH-KWLIVTGPFMP------------EAQRQKLLASAPKRPHISIF 282 (400)
T ss_pred ccceEEEecCC--ChhhHHHHHHHHHHhhhCCCCCc-ceEEEeCCCCC------------HHHHHHHHHhcccCCCeEEE
Confidence 34556777774 22333332 333333333222 23566666554 33444444444445788888
Q ss_pred ccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccc--ccc------cCCeEEEEC-CCC
Q 003985 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE--IIE------HGASGFHID-PYH 717 (781)
Q Consensus 647 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~E--iI~------dg~~G~lv~-p~d 717 (781)
-+.. ++..+++. |+..|.=+-| +|+.|-+++|+|.+.-..+-+.| .+. -|-..++.+ --.
T Consensus 283 ~f~~------~~~~ll~g-A~~vVSm~GY----NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt 351 (400)
T COG4671 283 EFRN------DFESLLAG-ARLVVSMGGY----NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLT 351 (400)
T ss_pred Ehhh------hHHHHHHh-hheeeecccc----hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCC
Confidence 7644 57788885 8887765422 68999999999998875444333 221 132333332 224
Q ss_pred HHHHHHHHHHHH
Q 003985 718 PDQAAELMADFF 729 (781)
Q Consensus 718 ~e~lA~~I~~~l 729 (781)
++.+|++|...+
T Consensus 352 ~~~La~al~~~l 363 (400)
T COG4671 352 PQNLADALKAAL 363 (400)
T ss_pred hHHHHHHHHhcc
Confidence 677888886655
No 150
>PLN02210 UDP-glucosyl transferase
Probab=96.05 E-value=4.1 Score=47.21 Aligned_cols=70 Identities=11% Similarity=0.168 Sum_probs=46.2
Q ss_pred cCChHHHHHHHHccCc--EEEEcCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CCeEEEECC------CCH
Q 003985 652 RARNGELYRYIADTKG--AFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHIDP------YHP 718 (781)
Q Consensus 652 ~v~~~el~~~la~aad--vfV~PS~~E~fGltvlEAMa~GlPVIaT----~~GG~~EiI~d-g~~G~lv~p------~d~ 718 (781)
+++..++.. .+. +||.=. | -++++||+.+|+|+|+- +..-.+..+.+ -+.|..+.. -+.
T Consensus 331 w~PQ~~iL~----h~~vg~FitH~---G-~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~ 402 (456)
T PLN02210 331 WSPQEKILS----HMAISCFVTHC---G-WNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKV 402 (456)
T ss_pred cCCHHHHhc----CcCcCeEEeeC---C-cccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCH
Confidence 555555554 243 555532 2 24899999999999996 33444555554 467877742 367
Q ss_pred HHHHHHHHHHH
Q 003985 719 DQAAELMADFF 729 (781)
Q Consensus 719 e~lA~~I~~~l 729 (781)
+++++++.+++
T Consensus 403 ~~l~~av~~~m 413 (456)
T PLN02210 403 EEVERCIEAVT 413 (456)
T ss_pred HHHHHHHHHHh
Confidence 88899998777
No 151
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=96.05 E-value=0.032 Score=67.32 Aligned_cols=151 Identities=15% Similarity=0.100 Sum_probs=106.8
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHH-HH---HHHHHhhccC----CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003985 563 HVGTLSDRSKPIVFSMARLDHVKNMTG-LV---ECYGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~-Li---eA~~~l~~~~----~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 634 (781)
+.|+..+++...++++-|+..+|.... ++ +.+.++++.- ....+++.|...+ .|...+..++.+.+++
T Consensus 518 ~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 593 (794)
T TIGR02093 518 HTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAP----GYHMAKLIIKLINSVA 593 (794)
T ss_pred hcCCccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCC----CcHHHHHHHHHHHHHH
Confidence 456666888889999999999999888 44 4455554321 1345666665443 2444455566666666
Q ss_pred HHcC----CCC--cEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003985 635 KTYK----LDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (781)
Q Consensus 635 ~el~----L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~d 706 (781)
+..+ +.+ +|.|+. .... .+.+.+-.++|+-.+-|. .|+.|..=+=+|.-|.++++|-.|...|+.++
T Consensus 594 ~~iN~Dp~v~~~lkVVFle----nY~V-slAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~ 668 (794)
T TIGR02093 594 EVVNNDPAVGDKLKVVFVP----NYNV-SLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREE 668 (794)
T ss_pred HHhccChhhCCceeEEEeC----CCCh-HHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHH
Confidence 4422 334 688886 3333 344444447999999775 89999999999999999999999999999987
Q ss_pred --CCeEEEECCCCHHHHHH
Q 003985 707 --GASGFHIDPYHPDQAAE 723 (781)
Q Consensus 707 --g~~G~lv~p~d~e~lA~ 723 (781)
++|+|+|-. +.++..+
T Consensus 669 vG~eN~fiFG~-~~~ev~~ 686 (794)
T TIGR02093 669 VGAENIFIFGL-TVEEVEA 686 (794)
T ss_pred hCcccEEEcCC-CHHHHHH
Confidence 889999964 5555443
No 152
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=96.01 E-value=0.017 Score=69.54 Aligned_cols=150 Identities=14% Similarity=0.048 Sum_probs=106.6
Q ss_pred cCCCCCCCCCEEEEEeeccCCCChHH-HHH---HHHHhhccC----CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH
Q 003985 564 VGTLSDRSKPIVFSMARLDHVKNMTG-LVE---CYGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 635 (781)
Q Consensus 564 ~g~l~~~~k~iIl~vGRL~~~Kgl~~-Lie---A~~~l~~~~----~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~ 635 (781)
.|+..+++...++++-|+..+|.... ++. .+.++++.- ....+++.|...+ .|......++.+.++++
T Consensus 521 ~g~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va~ 596 (798)
T PRK14985 521 TGIEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAP----GYYLAKNIIFAINKVAE 596 (798)
T ss_pred hCCccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCC----CcHHHHHHHHHHHHHHH
Confidence 46666888888999999999999888 544 455554320 1256666665543 34455566666666665
Q ss_pred HcC----CCC--cEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc-
Q 003985 636 TYK----LDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH- 706 (781)
Q Consensus 636 el~----L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~d- 706 (781)
..+ +.+ +|.|+. .... .+.+.+-.++|+-.+-|. .|+.|..=+=+|.-|.++++|-.|...|+.++
T Consensus 597 ~in~Dp~v~~~lkVVFle----nY~V-slAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~v 671 (798)
T PRK14985 597 VINNDPLVGDKLKVVFLP----DYCV-SAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQV 671 (798)
T ss_pred HhcCChhhCCceeEEEeC----CCCh-HHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHh
Confidence 442 234 688886 3334 444444447999999875 89999999999999999999999999999876
Q ss_pred -CCeEEEECCCCHHHHHH
Q 003985 707 -GASGFHIDPYHPDQAAE 723 (781)
Q Consensus 707 -g~~G~lv~p~d~e~lA~ 723 (781)
++|||.|-. +.++..+
T Consensus 672 G~eN~f~fG~-~~~ev~~ 688 (798)
T PRK14985 672 GEENIFIFGH-TVEQVKA 688 (798)
T ss_pred CcCcEEEeCC-CHHHHHH
Confidence 789999964 4554433
No 153
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=96.01 E-value=0.28 Score=59.41 Aligned_cols=292 Identities=14% Similarity=0.084 Sum_probs=167.5
Q ss_pred HHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHH
Q 003985 394 EDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAM 472 (781)
Q Consensus 394 ~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~-~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~ 472 (781)
......|.+.++ .-|+|-.|.....++...+..+ ..+.+.+..|+..+. +.++. -......-+..+
T Consensus 128 ~~f~d~ive~~~-~~d~vwihdyhlmllp~~lr~~~~~~~ig~flhspfps----sEi~r--------~lp~r~eIl~gl 194 (732)
T KOG1050|consen 128 QAFADKIVEVYE-EGDIVWIHDYHLMLLPQMLRERFNSAKIGFFLHSPFPS----SEIYR--------CLPVRKEILRGL 194 (732)
T ss_pred HHHHHHHHHhcc-CCCcEEEEcchhhccchhhhcccccceEEEeccCCCCh----HHHHH--------hcccHHHHHHhh
Confidence 344445555555 6788888887765555444444 456665777764432 11111 111111223345
Q ss_pred hhCCEEEecCHHHHhhccccc-----cccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhh
Q 003985 473 NNADFIITSTYQEIAGTKNTV-----GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH 547 (781)
Q Consensus 473 ~~AD~IIt~S~~~~~~~k~~v-----~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~ 547 (781)
..+|.|=..+++.+.....+- -.+.++ |...+ +.|.. ....+.++|-|+|...|............
T Consensus 195 l~~~~i~f~t~d~arhFls~c~R~l~~~~~s~--~~~~~----v~~rg-r~~~v~~~pigid~~r~v~~~~~~~~~~~-- 265 (732)
T KOG1050|consen 195 LYDDLLGFHTDDYARHFLSTCSRLLGLEVASK--FPTAG----VSGRG-RDVSVKALPIGIDVQRFVKLLELPYVGSK-- 265 (732)
T ss_pred hccCccccccccHHHHHHHHHHHHHHhhhhcc--CCcce----EEecc-ceeeeeecccccchHHhhccccchhHHHH--
Confidence 556655444433222111000 001100 00111 11111 12356668888888776543221110000
Q ss_pred cchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCC----CeEEEEEeCcCCCCCCcchHH
Q 003985 548 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREE 623 (781)
Q Consensus 548 ~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~~~LvIVG~g~~~~~~~d~ee 623 (781)
. ..+.-+ ..++.+|+-+-|++..||+..=+.++.++...+| .+.++.+..+... ...+.
T Consensus 266 --~-----------~ei~~~-~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~---~~~~v 328 (732)
T KOG1050|consen 266 --G-----------MEIKEP-FKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRT---DGKEV 328 (732)
T ss_pred --H-----------HHHhhh-ccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcc---cchHH
Confidence 0 001111 2477889999999999999988888888766554 5677777766542 22222
Q ss_pred HHHHHHHHHHHHHc----CC--CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcC----CcEE
Q 003985 624 IAEIEKMHELMKTY----KL--DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCG----LPTF 693 (781)
Q Consensus 624 ~~~~~~l~~li~el----~L--~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~G----lPVI 693 (781)
.+....+...+.+. +- ...|+++- ..++..++.++++ .+|+.+..++.+|..++.+|+.+|. .+.|
T Consensus 329 ~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~---~~~~~~~l~a~~~-Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lV 404 (732)
T KOG1050|consen 329 EELKFCVSVHVRRINEKFGSASYQPVHSLL---KDLPFLELLALYK-VAEVCPVTSWRDGMNLVFLEYILCQENKKSVLV 404 (732)
T ss_pred HHHHHHhHhhhhhhhhccCCcccceEEEee---ccCCHHHHhhhHH-hhhheeecccccccchhhhHHHHhhcccCCceE
Confidence 22233333333322 21 12344433 3677889999999 5999999999999999999999984 7788
Q ss_pred EcCccccccccccCCeEEEECCCCHHHHHHHHHHHHH
Q 003985 694 ATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFG 730 (781)
Q Consensus 694 aT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~ 730 (781)
.+..-|..+..++ ...+++|.|.++++..|..++.
T Consensus 405 lsef~G~~~tl~d--~aivvnpw~~~~~~~~i~~al~ 439 (732)
T KOG1050|consen 405 LSEFIGDDTTLED--AAIVVNPWDGDEFAILISKALT 439 (732)
T ss_pred Eeeeccccccccc--cCEEECCcchHHHHHHHHHHhh
Confidence 8888888887754 4678899999999999988874
No 154
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=95.68 E-value=0.19 Score=55.94 Aligned_cols=91 Identities=16% Similarity=0.104 Sum_probs=57.0
Q ss_pred CEEEEEeecc-C-CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003985 573 PIVFSMARLD-H-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (781)
Q Consensus 573 ~iIl~vGRL~-~-~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~ 650 (781)
.+.+..|.=. + .+.+..+++++.++.+.. ..+++.|.. . .+.+++...+. ..+.+.+
T Consensus 169 ~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~--~~~~i~~a~-~------------~~~i~~~~~~~---~~~~~~~--- 227 (347)
T PRK14089 169 TIAFMPGSRKSEIKRLMPIFKELAKKLEGKE--KILVVPSFF-K------------GKDLKEIYGDI---SEFEISY--- 227 (347)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHhhcC--cEEEEeCCC-c------------HHHHHHHHhcC---CCcEEec---
Confidence 3444555432 2 355666778888887643 566776553 2 13344433332 2344543
Q ss_pred CcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC
Q 003985 651 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (781)
Q Consensus 651 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~ 696 (781)
+.+.+++ +||+.+..| |.+.+|++.+|+|.|...
T Consensus 228 ------~~~~~m~-~aDlal~~S-----GT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 228 ------DTHKALL-EAEFAFICS-----GTATLEAALIGTPFVLAY 261 (347)
T ss_pred ------cHHHHHH-hhhHHHhcC-----cHHHHHHHHhCCCEEEEE
Confidence 2356777 499888876 888899999999999863
No 155
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=95.61 E-value=1.2 Score=49.00 Aligned_cols=110 Identities=15% Similarity=0.066 Sum_probs=65.5
Q ss_pred CCCCEEEEEeeccCCCCh-----HHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003985 570 RSKPIVFSMARLDHVKNM-----TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (781)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgl-----~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~ 644 (781)
+.+.+.+.+|.=+..-.+ ..+++.+..+.+... ..+.|..+-..| .+..+.|.+..+ -.+.+.
T Consensus 145 ~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~vttSRRTp--------~~~~~~L~~~~~---~~~~~~ 212 (311)
T PF06258_consen 145 PRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GSLLVTTSRRTP--------PEAEAALRELLK---DNPGVY 212 (311)
T ss_pred CCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-CeEEEEcCCCCc--------HHHHHHHHHhhc---CCCceE
Confidence 445566677763332222 245666666655544 788888887652 123333433332 345673
Q ss_pred EeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc
Q 003985 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG 699 (781)
Q Consensus 645 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG 699 (781)
+.. .. +..-+..+++. +|.++.+.- .-.-+.||.++|+||..-...+
T Consensus 213 ~~~-~~---~~nPy~~~La~-ad~i~VT~D---SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 213 IWD-GT---GENPYLGFLAA-ADAIVVTED---SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred Eec-CC---CCCcHHHHHHh-CCEEEEcCc---cHHHHHHHHHcCCCEEEecCCC
Confidence 333 12 22346778884 999999854 2234789999999999987665
No 156
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=95.54 E-value=6.6 Score=45.77 Aligned_cols=79 Identities=15% Similarity=0.106 Sum_probs=49.2
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CCeEEEECC
Q 003985 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHIDP 715 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT----~~GG~~EiI~d-g~~G~lv~p 715 (781)
.++++.+ +++..++... .+.++||.= +--.+++||+++|+|+|+- +..-.+..+.+ -+.|.-+..
T Consensus 343 ~g~~v~~----w~PQ~~vL~h--~~v~~fvtH----~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~ 412 (477)
T PLN02863 343 RGLVIRG----WAPQVAILSH--RAVGAFLTH----CGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCE 412 (477)
T ss_pred CCEEecC----CCCHHHHhcC--CCcCeEEec----CCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEecc
Confidence 3567666 5555555542 124566654 2245899999999999996 34444444433 367776632
Q ss_pred -----CCHHHHHHHHHHHH
Q 003985 716 -----YHPDQAAELMADFF 729 (781)
Q Consensus 716 -----~d~e~lA~~I~~~l 729 (781)
-+.+++++++.+++
T Consensus 413 ~~~~~~~~~~v~~~v~~~m 431 (477)
T PLN02863 413 GADTVPDSDELARVFMESV 431 (477)
T ss_pred CCCCCcCHHHHHHHHHHHh
Confidence 25678888887765
No 157
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=95.35 E-value=2.9 Score=44.62 Aligned_cols=146 Identities=15% Similarity=0.055 Sum_probs=81.9
Q ss_pred CCCCCEE---EEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHH----------HHH
Q 003985 569 DRSKPIV---FSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHE----------LMK 635 (781)
Q Consensus 569 ~~~k~iI---l~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~----------li~ 635 (781)
+.++... .|+||....||...+++..++..+. +...-++-|-...+ +...-+.. .++
T Consensus 177 d~se~nmnv~~yigR~Tt~kG~~~mfD~h~~~lK~-~~~~t~~~GierS~---------A~~~i~d~~~~~~y~~~~~~~ 246 (355)
T PF11440_consen 177 DVSEKNMNVNRYIGRQTTWKGPRRMFDLHEKILKP-AGFKTIMEGIERSP---------AKISIKDHGIPYEYYPKLDCD 246 (355)
T ss_dssp -GGGSEEEEEEEE--SSGGG-HHHHHHHHHHTTTT-TT-EEEEE---SST---------HHHHHHHTT--EEEE-CTGGG
T ss_pred hhHhhhcccceeeeeeeeecCcHHHhhhHHHhcCC-cchhHHhhhhhcCC---------ceeeeecCCcccccCcccccc
Confidence 3344444 7999999999999999988886654 66777777754331 11111100 011
Q ss_pred HcCC--CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC------CCCCcHHHHHHHHcCC-cEEEcCcccccc----
Q 003985 636 TYKL--DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF------YEAFGLTVVEAMTCGL-PTFATCHGGPAE---- 702 (781)
Q Consensus 636 el~L--~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~------~E~fGltvlEAMa~Gl-PVIaT~~GG~~E---- 702 (781)
+..+ ..-+..+| +.-++|....++. +...++-+. .+..-.+-+|..|||+ ||+-+..|....
T Consensus 247 ~~~~~pN~~~~v~~----~Yi~~E~~~~Mak-s~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D 321 (355)
T PF11440_consen 247 EPKPAPNSPVPVYG----PYIRSEGLERMAK-SLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLD 321 (355)
T ss_dssp G---SSS--EEEES----S--HHHHHHHHHT-EEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTT
T ss_pred CcccCCCCcceecc----hhhhHHHHHHHhh-ccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeec
Confidence 1111 12356666 6678899999996 666555442 3567889999999995 788775554333
Q ss_pred ---ccccCCeEEEECCCCHHHHHHHHHHHH
Q 003985 703 ---IIEHGASGFHIDPYHPDQAAELMADFF 729 (781)
Q Consensus 703 ---iI~dg~~G~lv~p~d~e~lA~~I~~~l 729 (781)
.+.+.-+.+.+|-.|.++..++|.++.
T Consensus 322 ~~~~~~~~~~~I~~De~dle~T~ekl~E~a 351 (355)
T PF11440_consen 322 GTRYIDHPYSAIYFDENDLESTVEKLIEVA 351 (355)
T ss_dssp SSBGGSS--S-EEE-TTSHHHHHHHHHHHH
T ss_pred CceeeccCcceeEeccchHHHHHHHHHHHh
Confidence 344445678899999999999997764
No 158
>PLN00414 glycosyltransferase family protein
Probab=95.25 E-value=7.8 Score=44.79 Aligned_cols=89 Identities=6% Similarity=0.000 Sum_probs=56.1
Q ss_pred cCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----Cccccccccc-cCCeEEEECC-----CCHHHH
Q 003985 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIE-HGASGFHIDP-----YHPDQA 721 (781)
Q Consensus 652 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT----~~GG~~EiI~-dg~~G~lv~p-----~d~e~l 721 (781)
+++..++... . +.++||.=. -.++++||+++|+|+|+. +..-.+..+. .-+.|..+.. -+.+++
T Consensus 319 w~PQ~~vL~h-~-~v~~fvtH~----G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i 392 (446)
T PLN00414 319 WVEQPLILSH-P-SVGCFVNHC----GFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESL 392 (446)
T ss_pred cCCHHHHhcC-C-ccceEEecC----chhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHH
Confidence 4555566542 1 135566542 246899999999999997 3334445553 4567877742 377888
Q ss_pred HHHHHHHHHhccCCH-HHHHHHHHHHHHHH
Q 003985 722 AELMADFFGKCKENP-SHWKKISDGGLKRI 750 (781)
Q Consensus 722 A~~I~~~l~~l~~dp-~~~~~~s~~a~~~v 750 (781)
++++.+++ .++ +..+++.+++++.-
T Consensus 393 ~~~v~~~m----~~~~e~g~~~r~~a~~~~ 418 (446)
T PLN00414 393 RDTVKSVM----DKDSEIGNLVKRNHKKLK 418 (446)
T ss_pred HHHHHHHh----cCChhhHHHHHHHHHHHH
Confidence 88888777 443 45556666655443
No 159
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=95.11 E-value=4.5 Score=42.97 Aligned_cols=112 Identities=10% Similarity=0.035 Sum_probs=65.5
Q ss_pred CCCCCEEEEEeeccCCCCh-H----HHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHH-cCCCCc
Q 003985 569 DRSKPIVFSMARLDHVKNM-T----GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT-YKLDGQ 642 (781)
Q Consensus 569 ~~~k~iIl~vGRL~~~Kgl-~----~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~e-l~L~~~ 642 (781)
.+..++-+.+|.-.+.-.+ + .++.++-+..+. ....+++--+-.. .+..+.+++. +.-..-
T Consensus 159 ~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~-~g~~~lisfSRRT------------p~~~~s~l~~~l~s~~~ 225 (329)
T COG3660 159 LPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILEN-QGGSFLISFSRRT------------PDTVKSILKNNLNSSPG 225 (329)
T ss_pred CCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHh-CCceEEEEeecCC------------cHHHHHHHHhccccCce
Confidence 3556677888865554444 2 222333222221 3567777766554 2355566655 444455
Q ss_pred EEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccc
Q 003985 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP 700 (781)
Q Consensus 643 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~ 700 (781)
+.|-+.-++.- -...+++ ++|.++..+-.- .-+-||.+.|+||++-.-.+.
T Consensus 226 i~w~~~d~g~N---PY~~~La-~Adyii~TaDSi---nM~sEAasTgkPv~~~~~~~~ 276 (329)
T COG3660 226 IVWNNEDTGYN---PYIDMLA-AADYIISTADSI---NMCSEAASTGKPVFILEPPNF 276 (329)
T ss_pred eEeCCCCCCCC---chHHHHh-hcceEEEecchh---hhhHHHhccCCCeEEEecCCc
Confidence 77776422222 3466777 599999986522 235799999999998754443
No 160
>PLN02555 limonoid glucosyltransferase
Probab=95.04 E-value=9.3 Score=44.58 Aligned_cols=95 Identities=13% Similarity=0.128 Sum_probs=57.9
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC-CeEEEEC
Q 003985 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHID 714 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT----~~GG~~EiI~dg-~~G~lv~ 714 (781)
.+++.+.+ +++..++... . +.++||.=. --++++||+.+|+|+|+. +.......+.+. +.|+-+.
T Consensus 336 ~~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH~----G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~ 405 (480)
T PLN02555 336 GDKGKIVQ----WCPQEKVLAH-P-SVACFVTHC----GWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLC 405 (480)
T ss_pred CCceEEEe----cCCHHHHhCC-C-ccCeEEecC----CcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEcc
Confidence 45666666 5566666542 1 355666542 245899999999999997 334444555554 6777762
Q ss_pred -----C--CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 003985 715 -----P--YHPDQAAELMADFFGKCKENPSHWKKISDGGLKR 749 (781)
Q Consensus 715 -----p--~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~ 749 (781)
. -+.++++++|.+++ .++ ..+++.++|++.
T Consensus 406 ~~~~~~~~v~~~~v~~~v~~vm----~~~-~g~~~r~ra~~l 442 (480)
T PLN02555 406 RGEAENKLITREEVAECLLEAT----VGE-KAAELKQNALKW 442 (480)
T ss_pred CCccccCcCcHHHHHHHHHHHh----cCc-hHHHHHHHHHHH
Confidence 1 25778888888776 443 234455444443
No 161
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=94.92 E-value=0.34 Score=58.13 Aligned_cols=149 Identities=13% Similarity=0.109 Sum_probs=94.7
Q ss_pred cCCCCCCCCCEEEEEeeccCCCChHHH----HHHHHHhhcc----CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH
Q 003985 564 VGTLSDRSKPIVFSMARLDHVKNMTGL----VECYGKNSQL----RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 635 (781)
Q Consensus 564 ~g~l~~~~k~iIl~vGRL~~~Kgl~~L----ieA~~~l~~~----~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~ 635 (781)
.|+..+++...++++-|+..+|..... ++-+.++++. ...+.+++.|...+ .|..-++.++.+.++++
T Consensus 436 ~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP----~d~~gK~iIk~I~~va~ 511 (713)
T PF00343_consen 436 TGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHP----GDYMGKEIIKLINNVAE 511 (713)
T ss_dssp HSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----T----T-HHHHHHHHHHHHHHH
T ss_pred hCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCC----CcHHHHHHHHHHHHHHH
Confidence 455557788888999999999998883 4555566543 12366777776544 34555566666666665
Q ss_pred Hc----CCCC--cEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc-
Q 003985 636 TY----KLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH- 706 (781)
Q Consensus 636 el----~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~d- 706 (781)
.. .+.+ +|.|+. ..+. .+.+.+-.++|+-.+.|. .|+.|..-+=||.-|.+.++|-.|...|+.+.
T Consensus 512 ~in~Dp~v~~~lkVvFle----nYdv-slA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~v 586 (713)
T PF00343_consen 512 VINNDPEVGDRLKVVFLE----NYDV-SLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAV 586 (713)
T ss_dssp HHCT-TTTCCGEEEEEET----T-SH-HHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH
T ss_pred HHhcChhhccceeEEeec----CCcH-HHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhc
Confidence 32 3344 789996 3444 555666557999999875 89999999999999999999999999999864
Q ss_pred -CCeEEEECCCCHHHHH
Q 003985 707 -GASGFHIDPYHPDQAA 722 (781)
Q Consensus 707 -g~~G~lv~p~d~e~lA 722 (781)
.+++|++-. +.++..
T Consensus 587 G~eN~fiFG~-~~~ev~ 602 (713)
T PF00343_consen 587 GEENIFIFGL-TAEEVE 602 (713)
T ss_dssp -GGGSEEES--BHHHHH
T ss_pred CCCcEEEcCC-CHHHHH
Confidence 458899854 455543
No 162
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=94.41 E-value=5.9 Score=43.12 Aligned_cols=57 Identities=14% Similarity=0.124 Sum_probs=39.2
Q ss_pred CcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcc---ccccccccCCeEEEECCCCHHHHHHHHHHHH
Q 003985 666 KGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG---GPAEIIEHGASGFHIDPYHPDQAAELMADFF 729 (781)
Q Consensus 666 advfV~PS~~E~fGltvlEAMa~GlPVIaT~~G---G~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l 729 (781)
|++++-- -|.---||...|+|.|.+.-| +..+... +.|.++..+|+.+..+...+.+
T Consensus 253 a~lvig~-----ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~~~s~~~~~~~~~a~~~l 312 (346)
T COG1817 253 ATLVIGA-----GGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLLYHSTDEIAIVEYAVRNL 312 (346)
T ss_pred hheeecC-----CchHHHHHHHhCCceEEecCCccccccHHHH--hcCceeecCCHHHHHHHHHHHh
Confidence 5555533 356678999999999998744 2333332 4688888888887777776655
No 163
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=94.33 E-value=14 Score=43.25 Aligned_cols=78 Identities=17% Similarity=0.172 Sum_probs=50.0
Q ss_pred cEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC----cccccccc-ccCCeEEEECC-
Q 003985 642 QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEII-EHGASGFHIDP- 715 (781)
Q Consensus 642 ~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~----~GG~~EiI-~dg~~G~lv~p- 715 (781)
.+.+.+ +++..++...-+ .+.||.= +-.++++||+.+|+|+|+.. .......+ +.-+.|..++.
T Consensus 339 g~vv~~----W~PQ~~iL~h~~--vg~FitH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~ 408 (481)
T PLN02992 339 GFVVPS----WAPQAEILAHQA--VGGFLTH----CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDP 408 (481)
T ss_pred CEEEee----cCCHHHHhCCcc--cCeeEec----CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCC
Confidence 466666 555556555211 2235443 23468999999999999973 34444555 34556877743
Q ss_pred ---CCHHHHHHHHHHHH
Q 003985 716 ---YHPDQAAELMADFF 729 (781)
Q Consensus 716 ---~d~e~lA~~I~~~l 729 (781)
-+.++++++|.+++
T Consensus 409 ~~~~~~~~l~~av~~vm 425 (481)
T PLN02992 409 KEVISRSKIEALVRKVM 425 (481)
T ss_pred CCcccHHHHHHHHHHHh
Confidence 36788889988877
No 164
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=91.89 E-value=0.083 Score=51.98 Aligned_cols=91 Identities=16% Similarity=0.292 Sum_probs=56.5
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc--------cccccccCCeEEE
Q 003985 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG--------PAEIIEHGASGFH 712 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG--------~~EiI~dg~~G~l 712 (781)
.+|.+.++.. ++..+++. +|+.|.-+ -+.|+.|++++|+|.|.-...+ ....+.....|..
T Consensus 55 ~~v~~~~~~~------~m~~~m~~-aDlvIs~a----G~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~ 123 (167)
T PF04101_consen 55 PNVKVFGFVD------NMAELMAA-ADLVISHA----GAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIM 123 (167)
T ss_dssp CCCEEECSSS------SHHHHHHH-HSEEEECS-----CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCC
T ss_pred CcEEEEechh------hHHHHHHH-cCEEEeCC----CccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccc
Confidence 6799998544 36778884 99888853 2579999999999998865444 2223333334544
Q ss_pred ECCC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 003985 713 IDPY--HPDQAAELMADFFGKCKENPSHWKKISDGG 746 (781)
Q Consensus 713 v~p~--d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a 746 (781)
+... +++.+.++|..++ .++.....+++++
T Consensus 124 ~~~~~~~~~~L~~~i~~l~----~~~~~~~~~~~~~ 155 (167)
T PF04101_consen 124 LDESELNPEELAEAIEELL----SDPEKLKEMAKAA 155 (167)
T ss_dssp SECCC-SCCCHHHHHHCHC----CCHH-SHHHCCCH
T ss_pred cCcccCCHHHHHHHHHHHH----cCcHHHHHHHHHH
Confidence 4322 3566788885554 8888766666554
No 165
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=91.83 E-value=26 Score=39.51 Aligned_cols=98 Identities=14% Similarity=0.211 Sum_probs=59.0
Q ss_pred HHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc-ccccccc-CC
Q 003985 631 HELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG-PAEIIEH-GA 708 (781)
Q Consensus 631 ~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG-~~EiI~d-g~ 708 (781)
+.++....-..+|.+.. +.. ..++...++. +|++|-.-+ -+++=||+.|+|+|+-.+.. ...+.++ |.
T Consensus 256 ~~ia~~~~~~~~i~~~~---d~~-~~~~~~~l~~-~dl~Vg~R~-----HsaI~al~~g~p~i~i~Y~~K~~~l~~~~gl 325 (385)
T COG2327 256 DAIAQLVLDSAEILVSS---DEY-AEELGGILAA-CDLIVGMRL-----HSAIMALAFGVPAIAIAYDPKVRGLMQDLGL 325 (385)
T ss_pred HHHHhhcCCccceEeec---chH-HHHHHHHhcc-CceEEeehh-----HHHHHHHhcCCCeEEEeecHHHHHHHHHcCC
Confidence 33333333236677764 222 4566778884 888776543 36788999999999974332 2222222 33
Q ss_pred eEEE--ECCCCHHHHHHHHHHHHHhccCCHHHHHH
Q 003985 709 SGFH--IDPYHPDQAAELMADFFGKCKENPSHWKK 741 (781)
Q Consensus 709 ~G~l--v~p~d~e~lA~~I~~~l~~l~~dp~~~~~ 741 (781)
.|+. +.|.|.+.+.+...+.+. .+++.+++
T Consensus 326 ~~~~~~i~~~~~~~l~~~~~e~~~---~~~~~~~~ 357 (385)
T COG2327 326 PGFAIDIDPLDAEILSAVVLERLT---KLDELRER 357 (385)
T ss_pred CcccccCCCCchHHHHHHHHHHHh---ccHHHHhh
Confidence 4444 467788888888877764 55555444
No 166
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=90.72 E-value=1.5 Score=48.83 Aligned_cols=132 Identities=12% Similarity=0.181 Sum_probs=65.0
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCCh------HHH--HHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003985 563 HVGTLSDRSKPIVFSMARLDHVKNM------TGL--VECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl------~~L--ieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 634 (781)
.+|+ +.++.+|+|+=........ ... .+.+.. ...+++.|++-..- . +....
T Consensus 185 ~~~~--~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~li~k~Hp-~---------------~~~~~ 244 (369)
T PF04464_consen 185 KLGI--DKDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNF--LLKNNYVLIIKPHP-N---------------MKKKF 244 (369)
T ss_dssp HTT----SS-EEEEEE----GGG--GGSS----TT-HHHHHH--HHTTTEEEEE--SH-H---------------HHTT-
T ss_pred Hhcc--CCCCcEEEEeeccccccccccccccccccCHHHHHH--HhCCCcEEEEEeCc-h---------------hhhch
Confidence 3565 5677799999655432222 111 222222 22356777665532 1 11111
Q ss_pred HH-cCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc--Cc-------ccccccc
Q 003985 635 KT-YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT--CH-------GGPAEII 704 (781)
Q Consensus 635 ~e-l~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT--~~-------GG~~EiI 704 (781)
.. ....++|.+... ..+++.++.. +|++|.= ++-++.|++.+++|||-. |. |...+ .
T Consensus 245 ~~~~~~~~~i~~~~~------~~~~~~ll~~-aDiLITD-----ySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~-~ 311 (369)
T PF04464_consen 245 KDFKEDNSNIIFVSD------NEDIYDLLAA-ADILITD-----YSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFD-Y 311 (369)
T ss_dssp ---TT-TTTEEE-TT-------S-HHHHHHT--SEEEES-----S-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS--T
T ss_pred hhhhccCCcEEECCC------CCCHHHHHHh-cCEEEEe-----chhHHHHHHHhCCCEEEEeccHHHHhhccCCCCc-h
Confidence 11 334577888752 2368888884 9998875 567999999999999964 32 22222 2
Q ss_pred ccCCeEEEECCCCHHHHHHHHHHHH
Q 003985 705 EHGASGFHIDPYHPDQAAELMADFF 729 (781)
Q Consensus 705 ~dg~~G~lv~p~d~e~lA~~I~~~l 729 (781)
.+..-|-.+. +.+++.++|..++
T Consensus 312 ~~~~pg~~~~--~~~eL~~~i~~~~ 334 (369)
T PF04464_consen 312 EEDLPGPIVY--NFEELIEAIENII 334 (369)
T ss_dssp TTSSSS-EES--SHHHHHHHHTTHH
T ss_pred HhhCCCceeC--CHHHHHHHHHhhh
Confidence 2333455554 8999999997765
No 167
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=90.48 E-value=1.3 Score=51.58 Aligned_cols=133 Identities=13% Similarity=0.102 Sum_probs=74.4
Q ss_pred CCCEEEEEeeccCCCCh----HHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003985 571 SKPIVFSMARLDHVKNM----TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (781)
Q Consensus 571 ~k~iIl~vGRL~~~Kgl----~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~fl 646 (781)
++.++++.|.+.. ... ..++++++++ |. ++++.-++.. . -.+++++...
T Consensus 276 ~~vv~vsfGs~~~-~~~~~~~~~~~~~~~~~----~~-~~iW~~~~~~------------~---------~~l~~n~~~~ 328 (500)
T PF00201_consen 276 KGVVYVSFGSIVS-SMPEEKLKEIAEAFENL----PQ-RFIWKYEGEP------------P---------ENLPKNVLIV 328 (500)
T ss_dssp TEEEEEE-TSSST-T-HHHHHHHHHHHHHCS----TT-EEEEEETCSH------------G---------CHHHTTEEEE
T ss_pred CCEEEEecCcccc-hhHHHHHHHHHHHHhhC----CC-cccccccccc------------c---------ccccceEEEe
Confidence 4456788898753 222 3345555544 44 5666555422 0 0133567777
Q ss_pred ccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccCCeEEEECCC--CHHH
Q 003985 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHGASGFHIDPY--HPDQ 720 (781)
Q Consensus 647 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT----~~GG~~EiI~dg~~G~lv~p~--d~e~ 720 (781)
. ++|..++... . ..++||.= |--.++.||+.+|+|+|+- |....+..+++.+.|..++.. +.++
T Consensus 329 ~----W~PQ~~lL~h-p-~v~~fitH----gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~ 398 (500)
T PF00201_consen 329 K----WLPQNDLLAH-P-RVKLFITH----GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEE 398 (500)
T ss_dssp S----S--HHHHHTS-T-TEEEEEES------HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHH
T ss_pred c----cccchhhhhc-c-cceeeeec----cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHH
Confidence 6 5665555431 1 13445542 2345899999999999997 334455566666678888654 5577
Q ss_pred HHHHHHHHHHhccCCHHHHHHHHH
Q 003985 721 AAELMADFFGKCKENPSHWKKISD 744 (781)
Q Consensus 721 lA~~I~~~l~~l~~dp~~~~~~s~ 744 (781)
+.++|.+++ +|+.+++...+
T Consensus 399 l~~ai~~vl----~~~~y~~~a~~ 418 (500)
T PF00201_consen 399 LRAAIREVL----ENPSYKENAKR 418 (500)
T ss_dssp HHHHHHHHH----HSHHHHHHHHH
T ss_pred HHHHHHHHH----hhhHHHHHHHH
Confidence 888887776 78876655433
No 168
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=89.41 E-value=22 Score=37.86 Aligned_cols=125 Identities=14% Similarity=0.126 Sum_probs=71.1
Q ss_pred CCCCCEEEEEeeccCC-------CChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc-CCC
Q 003985 569 DRSKPIVFSMARLDHV-------KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY-KLD 640 (781)
Q Consensus 569 ~~~k~iIl~vGRL~~~-------Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el-~L~ 640 (781)
..++++|++....... .+...+++.+..+.+..|+++++|== .|......+ . ...++. +.
T Consensus 114 ~~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~-HP~~~~~~~------~----~~~~~~~~~- 181 (269)
T PF05159_consen 114 SKNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKP-HPDERGGNK------Y----SYLEELPNL- 181 (269)
T ss_pred cCCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEE-CchhhCCCC------h----hHhhhhhcC-
Confidence 5678888888877654 23455666666666666778876543 342111111 0 222222 33
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHH
Q 003985 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 720 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~ 720 (781)
.++.++.. ...++.++.. +|..+.-+ +.+-+||+.+|+||++....-. ...|+..+....+.
T Consensus 182 ~~~~~~~~------~~~~~~Ll~~-s~~Vvtin-----StvGlEAll~gkpVi~~G~~~Y------~~~glt~~~~~~~~ 243 (269)
T PF05159_consen 182 PNVVIIDD------DVNLYELLEQ-SDAVVTIN-----STVGLEALLHGKPVIVFGRAFY------AGWGLTDDRKLDEF 243 (269)
T ss_pred CCeEEECC------CCCHHHHHHh-CCEEEEEC-----CHHHHHHHHcCCceEEecCccc------CCCCccCcCCchhh
Confidence 34455431 2245677775 77655543 6789999999999999632211 13466666544444
Q ss_pred HHH
Q 003985 721 AAE 723 (781)
Q Consensus 721 lA~ 723 (781)
+..
T Consensus 244 ~~~ 246 (269)
T PF05159_consen 244 WRA 246 (269)
T ss_pred hhc
Confidence 443
No 169
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=89.23 E-value=2.4 Score=45.34 Aligned_cols=99 Identities=16% Similarity=0.115 Sum_probs=62.8
Q ss_pred EEEEEeeccCCCCh--HHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccC
Q 003985 574 IVFSMARLDHVKNM--TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (781)
Q Consensus 574 iIl~vGRL~~~Kgl--~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~ 651 (781)
+++..|.-...|.+ +...+.+..+.+. +++++++|+..+ .+..+++.+..+....+.+.|
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~--~~~ivl~g~~~e------------~~~~~~i~~~~~~~~~~~~~~---- 185 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLAR--GARVVLTGGPAE------------RELAEEIAAALGGPRVVNLAG---- 185 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEechhh------------HHHHHHHHHhcCCCccccCcC----
Confidence 34444443444443 4666666666654 688999987543 334444454443223344566
Q ss_pred cCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC
Q 003985 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (781)
Q Consensus 652 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~ 696 (781)
..+-.|+..+++. +|++|.+- + | ++.-|.+.|+|+|+--
T Consensus 186 ~~~l~e~~~li~~-~~l~I~~D---s-g-~~HlA~a~~~p~i~l~ 224 (279)
T cd03789 186 KTSLRELAALLAR-ADLVVTND---S-G-PMHLAAALGTPTVALF 224 (279)
T ss_pred CCCHHHHHHHHHh-CCEEEeeC---C-H-HHHHHHHcCCCEEEEE
Confidence 5567899999996 99999984 2 3 4455579999999863
No 170
>PLN03004 UDP-glycosyltransferase
Probab=87.80 E-value=7.4 Score=45.03 Aligned_cols=85 Identities=12% Similarity=0.074 Sum_probs=55.9
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcE--EEEcCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CCeEEEE
Q 003985 641 GQFRWIAAQTNRARNGELYRYIADTKGA--FVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHI 713 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadv--fV~PS~~E~fGltvlEAMa~GlPVIaT----~~GG~~EiI~d-g~~G~lv 713 (781)
.++.+.+ +++..++.. ..++ ||.= +--++++||+++|+|+|+. +....+..+.+ -+.|..+
T Consensus 334 ~g~~v~~----W~PQ~~iL~----H~~v~~FvTH----~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l 401 (451)
T PLN03004 334 KGMVVKS----WAPQVPVLN----HKAVGGFVTH----CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISM 401 (451)
T ss_pred CcEEEEe----eCCHHHHhC----CCccceEecc----CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEe
Confidence 4566666 455555554 4565 4432 2246899999999999996 45555555543 3678877
Q ss_pred CC-----CCHHHHHHHHHHHHHhccCCHHHHHH
Q 003985 714 DP-----YHPDQAAELMADFFGKCKENPSHWKK 741 (781)
Q Consensus 714 ~p-----~d~e~lA~~I~~~l~~l~~dp~~~~~ 741 (781)
+. -+.++++++|.+++ .+++++++
T Consensus 402 ~~~~~~~~~~e~l~~av~~vm----~~~~~r~~ 430 (451)
T PLN03004 402 NESETGFVSSTEVEKRVQEII----GECPVRER 430 (451)
T ss_pred cCCcCCccCHHHHHHHHHHHh----cCHHHHHH
Confidence 53 26788888888777 67655444
No 171
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=85.68 E-value=6.9 Score=43.44 Aligned_cols=103 Identities=11% Similarity=0.054 Sum_probs=64.9
Q ss_pred CCCEEEEEeeccCCCChH--HHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003985 571 SKPIVFSMARLDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (781)
Q Consensus 571 ~k~iIl~vGRL~~~Kgl~--~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~ 648 (781)
++.+++..|.-.+.|... ...+.+..+.+ .+.+++++|+..+ ++.+...++++.......+.+.|
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~--~~~~vvl~ggp~e----------~e~~~~~~i~~~~~~~~~~~l~g- 249 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA--RGYEVVLTSGPDK----------DDLACVNEIAQGCQTPPVTALAG- 249 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEcCCCh----------HHHHHHHHHHHhcCCCccccccC-
Confidence 345566777655667654 55566666543 2578888876533 11222334443332223355667
Q ss_pred ccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc
Q 003985 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (781)
Q Consensus 649 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT 695 (781)
..+-.++..+++. ++++|..- .-.+-=|-|.|+|||+-
T Consensus 250 ---~~sL~el~ali~~-a~l~v~nD-----SGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 250 ---KTTFPELGALIDH-AQLFIGVD-----SAPAHIAAAVNTPLICL 287 (352)
T ss_pred ---CCCHHHHHHHHHh-CCEEEecC-----CHHHHHHHHcCCCEEEE
Confidence 6678999999995 99999874 23455677899999985
No 172
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=84.70 E-value=8.7 Score=42.69 Aligned_cols=180 Identities=13% Similarity=0.170 Sum_probs=122.0
Q ss_pred ccCCCC-CCCCCEEEEEeeccCCCChHHHHHHHHHhhccCC-CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC-
Q 003985 563 HVGTLS-DRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE-LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL- 639 (781)
Q Consensus 563 ~~g~l~-~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~-~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L- 639 (781)
++|... .+.+.+-++=-+++-.|+-..=+-+..+.-+..| .+..+.|.....- .+-..+..++..+.+
T Consensus 180 ~FGY~p~~~~~RvavfEPNi~vvK~~~~PmLi~E~aYR~~P~~v~~~~V~Nt~~~---------ke~~~F~~f~~~ldlv 250 (364)
T PF10933_consen 180 RFGYQPGRPGKRVAVFEPNISVVKTCFIPMLICEEAYRADPDAVEHVYVTNTYHL---------KEHPTFVNFANSLDLV 250 (364)
T ss_pred ccccccCCCCceEEEecCCceEEeecCccHHHHHHHHHhChhhcceEEEecchhh---------hcCHHHHHHHHhhHHh
Confidence 355533 2344555555667777774432222222222223 3555666654331 123355566666655
Q ss_pred -CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCH
Q 003985 640 -DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP 718 (781)
Q Consensus 640 -~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~ 718 (781)
++...|-| +. +++.++++..|++|.=.+.-+.-..-+||+--|=|.|-.. ..+. +.|+..+-.|.
T Consensus 251 r~gkasfeg----R~---~~p~fla~~tD~VvSHqWeN~lNYlY~daLyggYPLVHNS-----~~l~--d~GYYY~~fD~ 316 (364)
T PF10933_consen 251 RDGKASFEG----RF---DFPDFLAQHTDAVVSHQWENPLNYLYYDALYGGYPLVHNS-----PLLK--DVGYYYPDFDA 316 (364)
T ss_pred hcCeeEEee----ec---ChHHHHHhCCCEEEeccccchhhHHHHHHHhcCCCcccCc-----chhc--ccCcCCCCccH
Confidence 57788888 33 4678888889999988887788889999999999998752 2343 37999999999
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003985 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 719 e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll 769 (781)
.+=++++.+.+. +....++...+++++.+ .+++-..-+-++.|++.|
T Consensus 317 ~~G~r~L~~A~~---~HD~~~~~Y~~ra~~~l-~~~~p~n~~nv~~y~~~L 363 (364)
T PF10933_consen 317 FEGARQLLRAIR---EHDADLDAYRARARRLL-DRLSPENPANVRAYEARL 363 (364)
T ss_pred HHHHHHHHHHHH---HccccHHHHHHHHHHHH-HhhCCCCHHHHHHHHHhh
Confidence 999999988875 66777888888888877 678887778888898765
No 173
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=84.27 E-value=7.4 Score=40.52 Aligned_cols=103 Identities=15% Similarity=0.076 Sum_probs=60.5
Q ss_pred CCCCEEEEEeeccCCCChHH--HHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003985 570 RSKPIVFSMARLDHVKNMTG--LVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (781)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgl~~--LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG 647 (781)
++..+++..|.=.+.|.+.. ..+.+..+.+.. ++++++|+..+ .+.+....+.+... ...+.+.|
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~--~~vvl~g~~~~----------~~~~~~~~~~~~~~-~~~~~~~~ 170 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERG--YRVVLLGGPEE----------QEKEIADQIAAGLQ-NPVINLAG 170 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT---EEEE--SSHH----------HHHHHHHHHHTTHT-TTTEEETT
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhC--ceEEEEccchH----------HHHHHHHHHHHhcc-cceEeecC
Confidence 34456677777667777655 677777776643 78888888743 11222333333221 12577777
Q ss_pred cccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc
Q 003985 648 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (781)
Q Consensus 648 ~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT 695 (781)
..+-.++..+++. +|++|.+- .-.+-=|.|.|+|+|+-
T Consensus 171 ----~~~l~e~~ali~~-a~~~I~~D-----tg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 171 ----KTSLRELAALISR-ADLVIGND-----TGPMHLAAALGTPTVAL 208 (247)
T ss_dssp ----TS-HHHHHHHHHT-SSEEEEES-----SHHHHHHHHTT--EEEE
T ss_pred ----CCCHHHHHHHHhc-CCEEEecC-----ChHHHHHHHHhCCEEEE
Confidence 5678899999995 99999983 34566788999999996
No 174
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=84.20 E-value=3.1 Score=48.20 Aligned_cols=100 Identities=11% Similarity=-0.036 Sum_probs=64.1
Q ss_pred HHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcc
Q 003985 470 IAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGS 549 (781)
Q Consensus 470 ~a~~~AD~IIt~S~~~~~~~k~~v~qy~s~~~f~lp~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~ 549 (781)
-....+|.+++.|+..+...+..+- .++ ..++.++++++|.+.+.+.-.......
T Consensus 205 e~~~~~~~~~~ns~~~~~~f~~~~~------------------~L~--~~d~~~~y~ei~~s~~~~~~~~~~~~~----- 259 (495)
T KOG0853|consen 205 ETTGLAWKILVNSYFTKRQFKATFV------------------SLS--NSDITSTYPEIDGSWFTYGQYESHLEL----- 259 (495)
T ss_pred hhhhccceEecchhhhhhhhhhhhh------------------hcC--CCCcceeeccccchhccccccccchhc-----
Confidence 4566799999999887664433321 122 445889999999888765211111000
Q ss_pred hhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCC
Q 003985 550 IEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL 603 (781)
Q Consensus 550 i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~ 603 (781)
....+...|+ ...+..+..+-|+.+.||++.+++++..+....++
T Consensus 260 -------~~~~r~~~~v--~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~ 304 (495)
T KOG0853|consen 260 -------RLPVRLYRGV--SGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPE 304 (495)
T ss_pred -------ccccceeeee--cccceEeeeeeecCCCCCceeehhhHHhhhcccCC
Confidence 0111222344 33467788999999999999999999988765443
No 175
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=81.10 E-value=18 Score=36.14 Aligned_cols=63 Identities=21% Similarity=0.126 Sum_probs=42.8
Q ss_pred CCceEEEEcCCCchHHHHHHHHHc------CCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEE
Q 003985 406 GFPDFIIGNYSDGNLVASLLAYKM------GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFII 479 (781)
Q Consensus 406 ~~pDIIh~~~~~~~lva~llar~~------gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~II 479 (781)
.+||+|++|.+.......++++.+ |.++|++= +....+- .. ..-++++.-||..+
T Consensus 91 ~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIE-S~aRv~~--lS----------------lTGklly~~aD~f~ 151 (170)
T PF08660_consen 91 ERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIE-SFARVKT--LS----------------LTGKLLYPFADRFI 151 (170)
T ss_pred hCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEE-eeeecCC--Cc----------------hHHHHHHHhCCEEE
Confidence 389999999999988888888888 88888752 1111110 00 01224566799999
Q ss_pred ecCHHHHh
Q 003985 480 TSTYQEIA 487 (781)
Q Consensus 480 t~S~~~~~ 487 (781)
+.-++.++
T Consensus 152 VQW~~l~~ 159 (170)
T PF08660_consen 152 VQWEELAE 159 (170)
T ss_pred EcCHHHHh
Confidence 98887655
No 176
>PLN02167 UDP-glycosyltransferase family protein
Probab=80.77 E-value=12 Score=43.71 Aligned_cols=79 Identities=16% Similarity=0.125 Sum_probs=48.5
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC----cccccc-ccccCCeEEEECC
Q 003985 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAE-IIEHGASGFHIDP 715 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~----~GG~~E-iI~dg~~G~lv~p 715 (781)
++..+.+ +++..++...= +.++||.=. | -++++||+++|+|+|+-. ..-.+. +++.-+.|..+..
T Consensus 340 ~rg~v~~----w~PQ~~iL~h~--~vg~fvtH~---G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~ 409 (475)
T PLN02167 340 GRGLVCG----WAPQVEILAHK--AIGGFVSHC---G-WNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRL 409 (475)
T ss_pred cCeeeec----cCCHHHHhcCc--ccCeEEeeC---C-cccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeec
Confidence 3445555 55566655421 144566542 2 248999999999999963 333332 3444456877642
Q ss_pred ---------CCHHHHHHHHHHHH
Q 003985 716 ---------YHPDQAAELMADFF 729 (781)
Q Consensus 716 ---------~d~e~lA~~I~~~l 729 (781)
-+.++++++|.+++
T Consensus 410 ~~~~~~~~~~~~~~l~~av~~~m 432 (475)
T PLN02167 410 DYVSAYGEIVKADEIAGAVRSLM 432 (475)
T ss_pred ccccccCCcccHHHHHHHHHHHh
Confidence 26778888888776
No 177
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=80.41 E-value=14 Score=40.55 Aligned_cols=100 Identities=16% Similarity=0.053 Sum_probs=63.0
Q ss_pred CCCE-EEEEee-ccCCCChH--HHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003985 571 SKPI-VFSMAR-LDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (781)
Q Consensus 571 ~k~i-Il~vGR-L~~~Kgl~--~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~fl 646 (781)
++++ ++..|. ..+.|.+. ...+.+..+.+. +.+++++|+..+ .+...++.+..+ ...+.+.
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~--~~~ivl~G~~~e------------~~~~~~i~~~~~-~~~~~l~ 237 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQ--GYQVVLFGSAKD------------HPAGNEIEALLP-GELRNLA 237 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHC--CCEEEEEEChhh------------HHHHHHHHHhCC-cccccCC
Confidence 3444 455554 34666665 566666666542 478888887643 233333333322 1223356
Q ss_pred ccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc
Q 003985 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (781)
Q Consensus 647 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT 695 (781)
| ..+-.++..+++. +|++|..- .-.+-=|-|.|+|+|+-
T Consensus 238 g----~~sL~el~ali~~-a~l~I~~D-----SGp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 238 G----ETSLDEAVDLIAL-AKAVVTND-----SGLMHVAAALNRPLVAL 276 (334)
T ss_pred C----CCCHHHHHHHHHh-CCEEEeeC-----CHHHHHHHHcCCCEEEE
Confidence 6 6678999999995 99999884 23556678999999984
No 178
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=79.65 E-value=16 Score=39.73 Aligned_cols=99 Identities=14% Similarity=-0.008 Sum_probs=63.8
Q ss_pred CCCEEEEEeeccCCCChH--HHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003985 571 SKPIVFSMARLDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (781)
Q Consensus 571 ~k~iIl~vGRL~~~Kgl~--~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~ 648 (781)
++.+++..|.=...|.+. ...+.+..+.+. +++++++|+++. +.+..+++.+..+ +..+.|
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~--~~~~vl~~g~~~-----------e~~~~~~i~~~~~---~~~l~g- 241 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLAR--GLQIVLPWGNDA-----------EKQRAERIAEALP---GAVVLP- 241 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHC--CCeEEEeCCCHH-----------HHHHHHHHHhhCC---CCeecC-
Confidence 344566666545667664 566666666542 578888876643 2333344444332 235566
Q ss_pred ccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc
Q 003985 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (781)
Q Consensus 649 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT 695 (781)
..+-.++..+++. ++++|..- .-.+-=|-|.|+|+|+-
T Consensus 242 ---~~sL~el~ali~~-a~l~I~~D-----Sgp~HlAaa~g~P~i~l 279 (319)
T TIGR02193 242 ---KMSLAEVAALLAG-ADAVVGVD-----TGLTHLAAALDKPTVTL 279 (319)
T ss_pred ---CCCHHHHHHHHHc-CCEEEeCC-----ChHHHHHHHcCCCEEEE
Confidence 6678999999995 99999984 23455677889999985
No 179
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=78.87 E-value=99 Score=33.26 Aligned_cols=86 Identities=12% Similarity=0.099 Sum_probs=51.8
Q ss_pred hHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccC
Q 003985 587 MTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTK 666 (781)
Q Consensus 587 l~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aa 666 (781)
+..+++++..+.+.. +.+++++..... .| .+..+++.+.+.-...| +. ..+..|+..+++. +
T Consensus 190 ~~~l~~~l~~l~~~~-g~~v~~i~~~~~----~D------~~~~~~l~~~~~~~~~i--~~----~~~~~e~~~~i~~-~ 251 (298)
T TIGR03609 190 LLRLLRALDRLQRDT-GAFVLFLPFQQP----QD------LPLARALRDQLLGPAEV--LS----PLDPEELLGLFAS-A 251 (298)
T ss_pred HHHHHHHHHHHHHhh-CCeEEEEeCCcc----hh------HHHHHHHHHhcCCCcEE--Ee----cCCHHHHHHHHhh-C
Confidence 445666666665432 456655554321 11 23334444444322333 33 4467899999995 8
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCcEEEc
Q 003985 667 GAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (781)
Q Consensus 667 dvfV~PS~~E~fGltvlEAMa~GlPVIaT 695 (781)
+++|--.+ -..+=|+.+|+|+++-
T Consensus 252 ~~vI~~Rl-----H~~I~A~~~gvP~i~i 275 (298)
T TIGR03609 252 RLVIGMRL-----HALILAAAAGVPFVAL 275 (298)
T ss_pred CEEEEech-----HHHHHHHHcCCCEEEe
Confidence 87777654 3678899999999975
No 180
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=78.51 E-value=17 Score=40.15 Aligned_cols=102 Identities=14% Similarity=0.080 Sum_probs=62.7
Q ss_pred CCEEEEEeeccCCCChH--HHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 003985 572 KPIVFSMARLDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (781)
Q Consensus 572 k~iIl~vGRL~~~Kgl~--~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~ 649 (781)
..+++..|.-.+.|... ...+.+..+.+ .+.+++++|+..+ .+.+..+++.+..+-..-+.+.|
T Consensus 182 ~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~--~~~~ivl~g~p~~----------~e~~~~~~i~~~~~~~~~~~l~g-- 247 (344)
T TIGR02201 182 NYIVIQPTSRWFFKCWDNDRFSALIDALHA--RGYEVVLTSGPDK----------DELAMVNEIAQGCQTPRVTSLAG-- 247 (344)
T ss_pred CEEEEeCCCCccccCCCHHHHHHHHHHHHh--CCCeEEEecCCCH----------HHHHHHHHHHhhCCCCcccccCC--
Confidence 34556666544556553 44555555543 2578889886432 11222333333333222244666
Q ss_pred cCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc
Q 003985 650 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (781)
Q Consensus 650 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT 695 (781)
..+-.|+..+++. ++++|..- .-.+-=|-|.|+|+|+=
T Consensus 248 --~~sL~el~ali~~-a~l~Vs~D-----SGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 248 --KLTLPQLAALIDH-ARLFIGVD-----SVPMHMAAALGTPLVAL 285 (344)
T ss_pred --CCCHHHHHHHHHh-CCEEEecC-----CHHHHHHHHcCCCEEEE
Confidence 6778999999996 99999883 34566788999999985
No 181
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=78.24 E-value=4.9 Score=36.09 Aligned_cols=84 Identities=13% Similarity=0.164 Sum_probs=56.6
Q ss_pred EEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHH--HHHHHHccCcEEEEcCCCCCCc---H
Q 003985 606 LVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGE--LYRYIADTKGAFVQPAFYEAFG---L 680 (781)
Q Consensus 606 LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~e--l~~~la~aadvfV~PS~~E~fG---l 680 (781)
++|||+-.+ ....+++.++++|.. +.++|... .....+ +...+.+ +|+.|++.-+=+-. .
T Consensus 2 vliVGG~~~-----------~~~~~~~~~~~~G~~--~~~hg~~~-~~~~~~~~l~~~i~~-aD~VIv~t~~vsH~~~~~ 66 (97)
T PF10087_consen 2 VLIVGGRED-----------RERRYKRILEKYGGK--LIHHGRDG-GDEKKASRLPSKIKK-ADLVIVFTDYVSHNAMWK 66 (97)
T ss_pred EEEEcCCcc-----------cHHHHHHHHHHcCCE--EEEEecCC-CCccchhHHHHhcCC-CCEEEEEeCCcChHHHHH
Confidence 578888432 257888899998864 44444333 233334 8888885 99999987654433 3
Q ss_pred HHHHHHHcCCcEEEcCcccccccc
Q 003985 681 TVVEAMTCGLPTFATCHGGPAEII 704 (781)
Q Consensus 681 tvlEAMa~GlPVIaT~~GG~~EiI 704 (781)
+--+|-..|+|++.++..|...+.
T Consensus 67 vk~~akk~~ip~~~~~~~~~~~l~ 90 (97)
T PF10087_consen 67 VKKAAKKYGIPIIYSRSRGVSSLE 90 (97)
T ss_pred HHHHHHHcCCcEEEECCCCHHHHH
Confidence 456778889999999877765543
No 182
>PLN03015 UDP-glucosyl transferase
Probab=78.05 E-value=1.5e+02 Score=34.74 Aligned_cols=72 Identities=19% Similarity=0.175 Sum_probs=42.2
Q ss_pred cCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC----cccccccc-ccCCeEEEEC------CCCHHH
Q 003985 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEII-EHGASGFHID------PYHPDQ 720 (781)
Q Consensus 652 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~----~GG~~EiI-~dg~~G~lv~------p~d~e~ 720 (781)
+++..++...= +.+.||.=. --++++||+++|+|+|+-. ..-.+..+ +.-+.|.-+. .-..++
T Consensus 342 W~PQ~~vL~h~--~vg~fvtH~----GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~ 415 (470)
T PLN03015 342 WAPQVEILSHR--SIGGFLSHC----GWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREE 415 (470)
T ss_pred cCCHHHHhccC--ccCeEEecC----CchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHH
Confidence 45555555521 133455432 2358999999999999963 23333333 3335566553 125677
Q ss_pred HHHHHHHHH
Q 003985 721 AAELMADFF 729 (781)
Q Consensus 721 lA~~I~~~l 729 (781)
++++|.+++
T Consensus 416 i~~~v~~lm 424 (470)
T PLN03015 416 VASLVRKIV 424 (470)
T ss_pred HHHHHHHHH
Confidence 788887766
No 183
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=76.76 E-value=18 Score=40.03 Aligned_cols=99 Identities=18% Similarity=0.090 Sum_probs=69.0
Q ss_pred CCEEEEEe-eccCCCChH--HHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003985 572 KPIVFSMA-RLDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (781)
Q Consensus 572 k~iIl~vG-RL~~~Kgl~--~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~ 648 (781)
+.+++..| .-...|++. ...+.+..+.+.. .+++++|+..+ .+...++.+.++ +.+.+.|
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~--~~Vvl~g~~~e------------~e~~~~i~~~~~--~~~~l~~- 238 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIAKG--YQVVLFGGPDE------------EERAEEIAKGLP--NAVILAG- 238 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHHCC--CEEEEecChHH------------HHHHHHHHHhcC--CccccCC-
Confidence 44567777 665777766 5666666666654 88999998833 455556665553 2233666
Q ss_pred ccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC
Q 003985 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (781)
Q Consensus 649 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~ 696 (781)
..+-.++..+++. ||++|.+.. -.+-=|-|.|+|+|+--
T Consensus 239 ---k~sL~e~~~li~~-a~l~I~~DS-----g~~HlAaA~~~P~I~iy 277 (334)
T COG0859 239 ---KTSLEELAALIAG-ADLVIGNDS-----GPMHLAAALGTPTIALY 277 (334)
T ss_pred ---CCCHHHHHHHHhc-CCEEEccCC-----hHHHHHHHcCCCEEEEE
Confidence 7788999999995 999998842 34556789999999963
No 184
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=76.28 E-value=22 Score=36.43 Aligned_cols=38 Identities=16% Similarity=0.253 Sum_probs=25.8
Q ss_pred eEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCC
Q 003985 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIP 342 (781)
Q Consensus 279 ~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p 342 (781)
|||++....|+-. -| +. .|.+.|++.||+|. |+++...
T Consensus 1 M~ILlTNDDGi~a----------~G----i~--------aL~~~L~~~g~~V~----VvAP~~~ 38 (196)
T PF01975_consen 1 MRILLTNDDGIDA----------PG----IR--------ALAKALSALGHDVV----VVAPDSE 38 (196)
T ss_dssp SEEEEE-SS-TTS----------HH----HH--------HHHHHHTTTSSEEE----EEEESSS
T ss_pred CeEEEEcCCCCCC----------HH----HH--------HHHHHHHhcCCeEE----EEeCCCC
Confidence 8999999888721 12 34 56677877789999 9887744
No 185
>PLN00164 glucosyltransferase; Provisional
Probab=75.59 E-value=43 Score=39.15 Aligned_cols=51 Identities=10% Similarity=0.028 Sum_probs=35.9
Q ss_pred cHHHHHHHHcCCcEEEc----Ccccccccc-ccCCeEEEECC-------CCHHHHHHHHHHHH
Q 003985 679 GLTVVEAMTCGLPTFAT----CHGGPAEII-EHGASGFHIDP-------YHPDQAAELMADFF 729 (781)
Q Consensus 679 GltvlEAMa~GlPVIaT----~~GG~~EiI-~dg~~G~lv~p-------~d~e~lA~~I~~~l 729 (781)
-.+++||+++|+|+|+- |..-....+ +.-+.|+.++. -+.++++++|.+++
T Consensus 367 wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm 429 (480)
T PLN00164 367 WNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLM 429 (480)
T ss_pred cchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHh
Confidence 35899999999999996 344444444 33467877642 25788888888776
No 186
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=74.53 E-value=16 Score=36.14 Aligned_cols=60 Identities=17% Similarity=0.159 Sum_probs=37.0
Q ss_pred CCCceEEEEcCCCchHH-HHHHHHH--c-CCcEEEEecCCcc-ccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEE
Q 003985 405 QGFPDFIIGNYSDGNLV-ASLLAYK--M-GITQCTIAHALEK-TKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFII 479 (781)
Q Consensus 405 ~~~pDIIh~~~~~~~lv-a~llar~--~-gvp~v~t~H~l~~-~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~II 479 (781)
..+||+|+|.++.++.+ ...+.++ . ++|+++.+-+... .. . +.-..+|..+
T Consensus 87 ~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~H~------~------------------W~~~~~D~y~ 142 (169)
T PF06925_consen 87 EFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTVHP------F------------------WIHPGVDRYF 142 (169)
T ss_pred hcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCCCc------C------------------eecCCCCEEE
Confidence 35999999999886444 3333333 3 4776655444321 11 1 2345789999
Q ss_pred ecCHHHHhh
Q 003985 480 TSTYQEIAG 488 (781)
Q Consensus 480 t~S~~~~~~ 488 (781)
+.|+..++.
T Consensus 143 Vase~~~~~ 151 (169)
T PF06925_consen 143 VASEEVKEE 151 (169)
T ss_pred ECCHHHHHH
Confidence 999987663
No 187
>PLN02764 glycosyltransferase family protein
Probab=74.05 E-value=49 Score=38.39 Aligned_cols=86 Identities=5% Similarity=0.012 Sum_probs=53.2
Q ss_pred cCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC----cccccccccc-CCeEEEECC-----CCHHHH
Q 003985 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEH-GASGFHIDP-----YHPDQA 721 (781)
Q Consensus 652 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~----~GG~~EiI~d-g~~G~lv~p-----~d~e~l 721 (781)
+++..++... . +.++||.= +-.++++||+.+|+|+|+-. ....+..+.+ -+.|+.+.+ -+.+++
T Consensus 324 W~PQ~~vL~h-~-~v~~FvtH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i 397 (453)
T PLN02764 324 WVQQPLILSH-P-SVGCFVSH----CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESL 397 (453)
T ss_pred CCCHHHHhcC-c-ccCeEEec----CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHH
Confidence 5566666653 1 14556654 23469999999999999973 3344455543 356766532 267888
Q ss_pred HHHHHHHHHhccCCH-HHHHHHHHHHH
Q 003985 722 AELMADFFGKCKENP-SHWKKISDGGL 747 (781)
Q Consensus 722 A~~I~~~l~~l~~dp-~~~~~~s~~a~ 747 (781)
++++.+++ .++ +..+++.++++
T Consensus 398 ~~av~~vm----~~~~~~g~~~r~~a~ 420 (453)
T PLN02764 398 RDAINSVM----KRDSEIGNLVKKNHT 420 (453)
T ss_pred HHHHHHHh----cCCchhHHHHHHHHH
Confidence 88888777 453 33444444444
No 188
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=72.55 E-value=45 Score=38.76 Aligned_cols=141 Identities=18% Similarity=0.209 Sum_probs=72.9
Q ss_pred CCCEEEEEeecc--CCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003985 571 SKPIVFSMARLD--HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (781)
Q Consensus 571 ~k~iIl~vGRL~--~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~ 648 (781)
+..+.++.|.+. ..+.+..+..++..+.. --|+++.+......+.+.++...........++ ..++..+.+
T Consensus 261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~----~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~--~~~~g~v~~- 333 (455)
T PLN02152 261 SSVIYVSFGTMVELSKKQIEELARALIEGKR----PFLWVITDKLNREAKIEGEEETEIEKIAGFRHE--LEEVGMIVS- 333 (455)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHcCC----CeEEEEecCcccccccccccccccccchhHHHh--ccCCeEEEe-
Confidence 455677888765 34556666677766532 234445432110000000000000001122222 235555556
Q ss_pred ccCcCChHHHHHHHHccCc--EEEEcCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC-CeEEEEC-----CC
Q 003985 649 QTNRARNGELYRYIADTKG--AFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHID-----PY 716 (781)
Q Consensus 649 ~~~~v~~~el~~~la~aad--vfV~PS~~E~fGltvlEAMa~GlPVIaT----~~GG~~EiI~dg-~~G~lv~-----p~ 716 (781)
+++..++.. ... +||.= +-.++++||+.+|+|+|+- |....+..+.+. +.|+-+. .-
T Consensus 334 ---W~PQ~~iL~----h~~vg~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~ 402 (455)
T PLN02152 334 ---WCSQIEVLR----HRAVGCFVTH----CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLV 402 (455)
T ss_pred ---eCCHHHHhC----CcccceEEee----CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcC
Confidence 555555554 244 34443 2246899999999999996 344444455441 2455542 22
Q ss_pred CHHHHHHHHHHHH
Q 003985 717 HPDQAAELMADFF 729 (781)
Q Consensus 717 d~e~lA~~I~~~l 729 (781)
+.+++++++.+++
T Consensus 403 ~~e~l~~av~~vm 415 (455)
T PLN02152 403 ERGEIRRCLEAVM 415 (455)
T ss_pred cHHHHHHHHHHHH
Confidence 6788999998877
No 189
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=71.95 E-value=28 Score=38.02 Aligned_cols=96 Identities=15% Similarity=0.042 Sum_probs=60.0
Q ss_pred EEEEEeeccCCCChH--HHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccC
Q 003985 574 IVFSMARLDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (781)
Q Consensus 574 iIl~vGRL~~~Kgl~--~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~ 651 (781)
+++..|.-...|.+. ...+.+..+.+. +.++++.|+++. +.+...++.+. ...+.+.|
T Consensus 181 i~~~~~~s~~~k~Wp~e~~a~li~~l~~~--~~~ivl~~G~~~-----------e~~~~~~i~~~---~~~~~l~g---- 240 (322)
T PRK10964 181 LVFLHATTRDDKHWPEAHWRELIGLLAPS--GLRIKLPWGAEH-----------EEQRAKRLAEG---FPYVEVLP---- 240 (322)
T ss_pred EEEEeCCCcccccCCHHHHHHHHHHHHHC--CCeEEEeCCCHH-----------HHHHHHHHHcc---CCcceecC----
Confidence 334444433455544 556666666442 567777655533 12233333332 23466777
Q ss_pred cCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc
Q 003985 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (781)
Q Consensus 652 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT 695 (781)
..+-.|+..+++. +|++|..- .-.+-=|-|+|+|+|+-
T Consensus 241 ~~sL~elaali~~-a~l~I~nD-----SGp~HlA~A~g~p~val 278 (322)
T PRK10964 241 KLSLEQVARVLAG-AKAVVSVD-----TGLSHLTAALDRPNITL 278 (322)
T ss_pred CCCHHHHHHHHHh-CCEEEecC-----CcHHHHHHHhCCCEEEE
Confidence 5678999999995 99999984 23566688999999995
No 190
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=71.27 E-value=12 Score=37.27 Aligned_cols=83 Identities=12% Similarity=0.112 Sum_probs=44.7
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHH
Q 003985 406 GFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (781)
Q Consensus 406 ~~pDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (781)
..+|+|.+.+-.. .-+..+.-...++|.++.+|.--. .|+.+....++. .|.+ ......-.||.|+.+|..
T Consensus 58 ~~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl-~YP~~~~~~rd~--~~~~-----~ni~saLaAD~v~FNS~~ 129 (168)
T PF12038_consen 58 HSYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQL-AYPVSPGQERDF--QYGM-----NNIYSALAADRVVFNSAF 129 (168)
T ss_pred cCCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCcc-cCCCCCCccccc--cHHH-----HHHHHHHhceeeeecchh
Confidence 4689999776432 222222223357999999996322 233332122222 1221 122345579999999976
Q ss_pred HHhhcccccccc
Q 003985 485 EIAGTKNTVGQY 496 (781)
Q Consensus 485 ~~~~~k~~v~qy 496 (781)
-.+..-+.+.++
T Consensus 130 nr~sFL~~~~~f 141 (168)
T PF12038_consen 130 NRDSFLDGIPSF 141 (168)
T ss_pred hHHHHHHHHHHH
Confidence 655444444444
No 191
>PF03401 TctC: Tripartite tricarboxylate transporter family receptor; InterPro: IPR005064 Bordetella pertussis, the causative agent of human whooping cough (pertussis), is an obligate human pathogen with diverse high-affinity transport systems for the assimilation of iron, a biometal that is essential for growth []. Periplasmic binding proteins of a new family, particularly well represented in this organism (and more generally in beta-proteobacteria), have been called Bug receptors []. They adopt a characteristic Venus flytrap fold with two globular domains bisected by a ligand-binding cleft. The family is specific for carboxylated solutes, with a characteristic mode of binding involving two highly conserved beta strand-beta turn-alpha helix motifs originating from each domain. These two motifs form hydrogen bonds with a carboxylate group of the ligand, both directly and via conserved water molecules, and have thus been termed the carboxylate pincers. Domain 1 recognises the ligand and the carboxylate group serves as an initial anchoring point. Domain 2 discriminates between productively and non-productively bound ligands as proper interactions with this domain is needed for the of the closed conformation []. BugE has a glutamate bound ligand. No charged residues are involved in glutamate binding by BugE, unlike what has been described for all glutamate receptors reported so far. The Bug architecture is highly conserved despite limited sequence identity [].; GO: 0030288 outer membrane-bounded periplasmic space; PDB: 2QPQ_C 2DVZ_A 2F5X_A.
Probab=70.74 E-value=55 Score=35.12 Aligned_cols=148 Identities=18% Similarity=0.183 Sum_probs=83.1
Q ss_pred CEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCc
Q 003985 573 PIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNR 652 (781)
Q Consensus 573 ~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~ 652 (781)
+.++.++.=.+.|+++.+++++++.+. .+++-..|.|.. . --....+.+++|+. +.+.++...
T Consensus 79 ~~vl~v~~dsp~~t~~eli~~ak~~p~---~~~~g~~g~g~~----------~-hl~~~~l~~~~G~~--~~~Vpy~G~- 141 (274)
T PF03401_consen 79 PNVLVVRADSPYKTLEELIEYAKANPG---KLTFGSSGPGSS----------D-HLAAALLAKAAGIK--FTHVPYDGG- 141 (274)
T ss_dssp EEEEEEETTSS-SSHHHHHHHHHCSCC---C-EEEESSTTSH----------H-HHHHHHHHHHHT-----EEEE-SSH-
T ss_pred ceEEEEeCCCccccHHHHHHHHHhCCC---CeEEEecCCCch----------H-HHHHHHHHHHhCCc--eEEEEeCCc-
Confidence 456667666789999999999887643 244444443322 0 11334456677764 455554222
Q ss_pred CChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCC------------------cEEEcCccccccccccCCeEEEEC
Q 003985 653 ARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL------------------PTFATCHGGPAEIIEHGASGFHID 714 (781)
Q Consensus 653 v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl------------------PVIaT~~GG~~EiI~dg~~G~lv~ 714 (781)
.+.+..++....|+.+.. .-......-.|. |++.. . |..++....-.|+.++
T Consensus 142 --~~~~~allgG~vd~~~~~------~~~~~~~~~~G~~k~Lav~~~~r~~~~pdvPT~~E-~-G~~d~~~~~~~g~~~p 211 (274)
T PF03401_consen 142 --AEALTALLGGHVDAAFGS------PGEALPYVEAGDLKPLAVFSDERSPALPDVPTFKE-Q-GYPDIVFGSWRGLFAP 211 (274)
T ss_dssp --HHHHHHHHTTSSSEEEEE------HHHHHHHHHTTSEEEEEECSSS-BTTCTTS-BTTT-T-T-TTG--EEEEEEEEE
T ss_pred --cHHHHHHhCCeeeEEeec------HHHHHHHHhCCCceEEEEecCccccccCCCCCHHH-h-CccceeeeeeeeeecC
Confidence 455666666666665553 112233333332 22211 1 2223333345689999
Q ss_pred CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 003985 715 PYHPDQAAELMADFFGKCKENPSHWKKISDGGL 747 (781)
Q Consensus 715 p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~ 747 (781)
++-+++..+.+.+.+++..+||+..+.+.+.+.
T Consensus 212 ~gtp~~~~~~l~~a~~~~~~~pe~~~~~~~~g~ 244 (274)
T PF03401_consen 212 KGTPDEIVDKLADAIKKALEDPEFQEFLEKMGL 244 (274)
T ss_dssp TTS-HHHHHHHHHHHHHHHT-HHHHHHHHHHTE
T ss_pred CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHCCC
Confidence 999999999999999999999998777666543
No 192
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=70.25 E-value=9.4 Score=41.06 Aligned_cols=80 Identities=16% Similarity=0.149 Sum_probs=48.7
Q ss_pred CCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCcc-ccCC---CChhhHhhhhccccchhhh-hHHHHHHhhCCEEE
Q 003985 406 GFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEK-TKYP---DSDIYWKKFDEKYHFSCQF-TADLIAMNNADFII 479 (781)
Q Consensus 406 ~~pDIIh~~~~~-~~lva~llar~~gvp~v~t~H~l~~-~k~~---~s~~~~k~~~~~y~f~~~~-~~e~~a~~~AD~II 479 (781)
.+.||+|+.... ++++|++++.+.|+|+++|=|+... .+.. .++..+....-+--+...| ..-..++..||.|+
T Consensus 171 P~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l~~~~Y~~Ad~I~ 250 (268)
T PF11997_consen 171 PKADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESLSRLAYRAADRIT 250 (268)
T ss_pred CCCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhCeec
Confidence 356999987766 4899999999999999999999632 1111 1111100000000011111 23456899999999
Q ss_pred ecCHHH
Q 003985 480 TSTYQE 485 (781)
Q Consensus 480 t~S~~~ 485 (781)
+.....
T Consensus 251 ~l~~~n 256 (268)
T PF11997_consen 251 PLYEYN 256 (268)
T ss_pred ccchhh
Confidence 988753
No 193
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=69.36 E-value=19 Score=36.42 Aligned_cols=68 Identities=16% Similarity=0.074 Sum_probs=28.2
Q ss_pred CceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccccCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHH
Q 003985 407 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 486 (781)
Q Consensus 407 ~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~ 486 (781)
+||+++.-..+.-.--...+++.|+|++..-=-+.... + ..|.+... .-...++..|.|.+.|...+
T Consensus 95 ~P~~~i~~EtElWPnll~~a~~~~ip~~LvNarls~~s----------~-~~~~~~~~--~~r~~l~~f~~i~aqs~~da 161 (186)
T PF04413_consen 95 RPDLLIWVETELWPNLLREAKRRGIPVVLVNARLSERS----------F-RRYRRFPF--LFRPLLSRFDRILAQSEADA 161 (186)
T ss_dssp --SEEEEES----HHHHHH-----S-EEEEEE-------------------------H--HHHHHGGG-SEEEESSHHHH
T ss_pred CCCEEEEEccccCHHHHHHHhhcCCCEEEEeeeecccc----------c-hhhhhhHH--HHHHHHHhCCEEEECCHHHH
Confidence 89998876665422333456778999886532221111 0 11211111 12357889999999998876
Q ss_pred h
Q 003985 487 A 487 (781)
Q Consensus 487 ~ 487 (781)
+
T Consensus 162 ~ 162 (186)
T PF04413_consen 162 E 162 (186)
T ss_dssp H
T ss_pred H
Confidence 6
No 194
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=67.96 E-value=37 Score=37.51 Aligned_cols=99 Identities=16% Similarity=0.038 Sum_probs=60.3
Q ss_pred CEEEEEeec-cCCCChH--HHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC--Cc-EEEe
Q 003985 573 PIVFSMARL-DHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD--GQ-FRWI 646 (781)
Q Consensus 573 ~iIl~vGRL-~~~Kgl~--~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~--~~-V~fl 646 (781)
.+++..|.= .+.|... ...+.+..+.+ .+++++++|+..+ .+...++.+..+-. .+ +.+.
T Consensus 182 ~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~--~~~~vvl~Gg~~e------------~~~~~~i~~~~~~~~~~~~~~l~ 247 (348)
T PRK10916 182 IIGFCPGAEFGPAKRWPHYHYAELAQQLID--EGYQVVLFGSAKD------------HEAGNEILAALNTEQQAWCRNLA 247 (348)
T ss_pred EEEEeCCCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEeCHHh------------HHHHHHHHHhcccccccceeecc
Confidence 344556542 3566544 44555555543 3578888887543 23333333333211 12 4455
Q ss_pred ccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc
Q 003985 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (781)
Q Consensus 647 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT 695 (781)
| ..+-.++..+++. ++++|..- .-.+-=|-|.|+|||+-
T Consensus 248 g----~~sL~el~ali~~-a~l~I~nD-----TGp~HlAaA~g~P~val 286 (348)
T PRK10916 248 G----ETQLEQAVILIAA-CKAIVTND-----SGLMHVAAALNRPLVAL 286 (348)
T ss_pred C----CCCHHHHHHHHHh-CCEEEecC-----ChHHHHHHHhCCCEEEE
Confidence 6 5678899999995 99999874 23556688999999984
No 195
>PRK02122 glucosamine-6-phosphate deaminase-like protein; Validated
Probab=66.57 E-value=33 Score=41.71 Aligned_cols=106 Identities=20% Similarity=0.284 Sum_probs=55.3
Q ss_pred HHHHHHHHHhcCCCCC-------CCchhHHHHhhhcCCccccCCcHHHHHHHHHHHHHhhcC-----CCcccHhhhhcCC
Q 003985 208 SSLSKAEDHLSKLPPD-------TPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQA-----PDPSTLEKFLGRL 275 (781)
Q Consensus 208 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~~~~~~~~-----p~~~~~~~f~~r~ 275 (781)
+-.++|.-.|+..-.. .-|.+ +.|.+|==+-||.-.+ -.+.++-|...+.- |+....-.--..-
T Consensus 291 ~~~~~~~~~l~~~~~k~~l~l~~~d~~~--~~~~~l~~~~g~~~~~--~~~~f~~~~~~i~~~p~g~~~~~~~~~~~~~~ 366 (652)
T PRK02122 291 KLIRRAVVWLCQKLGKPILKLTDKDYNE--NGLSDLLAQYGSAYNV--NIKVFNDLQHTITGWPGGKPNADDTNRPERAL 366 (652)
T ss_pred HHHHHHHHHHHHHhCCCcccCchhhhhh--cCHHHHHHHhCcHHHH--HHHHHHHHHHHhcCCCCCCCCcccccCCcccc
Confidence 3567777777654321 11211 2233332245664333 23556666666633 2221111111223
Q ss_pred CCceEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEcc
Q 003985 276 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (781)
Q Consensus 276 p~~~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~ 340 (781)
|..+||++||||- +..++| .|| ...+|.++||+|+ |+++|.+
T Consensus 367 ~~~~rvLv~spHP---DDevi~---~GG---------------Tlarl~~~G~~V~--vv~~TsG 408 (652)
T PRK02122 367 PYPKRVIIFSPHP---DDDVIS---MGG---------------TFRRLVEQGHDVH--VAYQTSG 408 (652)
T ss_pred cCCceEEEEEeCC---CchHhh---hHH---------------HHHHHHHCCCcEE--EEEecCC
Confidence 5578999999994 223444 466 2346899999999 4445544
No 196
>PLN02207 UDP-glycosyltransferase
Probab=65.49 E-value=65 Score=37.57 Aligned_cols=79 Identities=13% Similarity=0.069 Sum_probs=48.2
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CCeEEEEC-
Q 003985 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHID- 714 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT----~~GG~~EiI~d-g~~G~lv~- 714 (781)
++....+ +++..++...= +.+.||.=. --++++||+.+|+|+|+- +....+..+.+ -+.|.-+.
T Consensus 332 ~~g~i~~----W~PQ~~IL~H~--~vg~FvTH~----GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~ 401 (468)
T PLN02207 332 GRGMICG----WSPQVEILAHK--AVGGFVSHC----GWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKL 401 (468)
T ss_pred CCeEEEE----eCCHHHHhccc--ccceeeecC----ccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEec
Confidence 4555556 55566666531 133455431 234889999999999996 33344444333 45666331
Q ss_pred --------CCCHHHHHHHHHHHH
Q 003985 715 --------PYHPDQAAELMADFF 729 (781)
Q Consensus 715 --------p~d~e~lA~~I~~~l 729 (781)
.-+.++++++|.+++
T Consensus 402 ~~~~~~~~~v~~e~i~~av~~vm 424 (468)
T PLN02207 402 DYRVHSDEIVNANEIETAIRCVM 424 (468)
T ss_pred ccccccCCcccHHHHHHHHHHHH
Confidence 226788999998887
No 197
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=62.40 E-value=32 Score=36.73 Aligned_cols=54 Identities=19% Similarity=0.019 Sum_probs=32.7
Q ss_pred CcEEEEcCCCC--CCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHH
Q 003985 666 KGAFVQPAFYE--AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMAD 727 (781)
Q Consensus 666 advfV~PS~~E--~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~ 727 (781)
+|++|.=-.-+ ++--++--|+.+|+|||.-+-+-... + +-.+ .+.+++.+.+.+
T Consensus 198 i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~~----~--~~~~--~~~~el~~~l~~ 253 (256)
T TIGR00715 198 IDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQTIP----G--VAIF--DDISQLNQFVAR 253 (256)
T ss_pred CCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCCC----C--CccC--CCHHHHHHHHHH
Confidence 56666643322 45567888999999999986654311 0 0122 367777666654
No 198
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=60.85 E-value=20 Score=38.38 Aligned_cols=70 Identities=10% Similarity=0.139 Sum_probs=48.2
Q ss_pred hHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCC-cEEEcC--ccccccccccCCeEEEECCCCHHHHHHHH
Q 003985 655 NGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-PTFATC--HGGPAEIIEHGASGFHIDPYHPDQAAELM 725 (781)
Q Consensus 655 ~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl-PVIaT~--~GG~~EiI~dg~~G~lv~p~d~e~lA~~I 725 (781)
..+....|+. +..+++|.-...+..-++|||++|| |||.++ .-...++|.=....+.++..+..++-+.|
T Consensus 227 ~~~~~~~l~~-S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL 299 (302)
T PF03016_consen 227 PSEYMELLRN-SKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEIL 299 (302)
T ss_pred chHHHHhccc-CeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHH
Confidence 3456667774 7788888777778889999999995 777765 23455566445667777766665554444
No 199
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=60.75 E-value=1.9e+02 Score=29.11 Aligned_cols=130 Identities=17% Similarity=0.241 Sum_probs=63.6
Q ss_pred CCCceEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCCccCccee
Q 003985 275 LPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLE 354 (781)
Q Consensus 275 ~p~~~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e 354 (781)
++|.|||.|-.+=| . |-.+.++ .+++.|.+.|+.|. =++|...-+ .|.....+..
T Consensus 2 ~~~~mki~ITG~PG------------v-GKtTl~~--------ki~e~L~~~g~kvg---Gf~t~EVR~-gGkR~GF~Iv 56 (179)
T COG1618 2 IKMAMKIFITGRPG------------V-GKTTLVL--------KIAEKLREKGYKVG---GFITPEVRE-GGKRIGFKIV 56 (179)
T ss_pred CCcceEEEEeCCCC------------c-cHHHHHH--------HHHHHHHhcCceee---eEEeeeeec-CCeEeeeEEE
Confidence 57899998774322 2 4445555 78889999999886 355544322 1222223333
Q ss_pred eecCCCCeEEEEeccCCCcccccccccccCc-hhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-----hHH--HHHHH
Q 003985 355 RVSGTEHTHILRVPFRSEKGILRQWISRFDV-WPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-----NLV--ASLLA 426 (781)
Q Consensus 355 ~v~~~~~~~I~rvP~~~~~~~~~~~isr~~i-~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~-----~lv--a~lla 426 (781)
.+...+..+.-++-+.... +.+.-+ ...++..+..+.+...+ ..|+|+..--.+ .-+ +.--.
T Consensus 57 dl~tg~~~~la~~~~~~~r------vGkY~V~v~~le~i~~~al~rA~~----~aDvIIIDEIGpMElks~~f~~~ve~v 126 (179)
T COG1618 57 DLATGEEGILARVGFSRPR------VGKYGVNVEGLEEIAIPALRRALE----EADVIIIDEIGPMELKSKKFREAVEEV 126 (179)
T ss_pred EccCCceEEEEEcCCCCcc------cceEEeeHHHHHHHhHHHHHHHhh----cCCEEEEecccchhhccHHHHHHHHHH
Confidence 3332233344444332210 111111 11233333232222222 379998665433 111 11222
Q ss_pred HHcCCcEEEEecC
Q 003985 427 YKMGITQCTIAHA 439 (781)
Q Consensus 427 r~~gvp~v~t~H~ 439 (781)
-..+.|++.|+|-
T Consensus 127 l~~~kpliatlHr 139 (179)
T COG1618 127 LKSGKPLIATLHR 139 (179)
T ss_pred hcCCCcEEEEEec
Confidence 2357899999993
No 200
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=59.71 E-value=81 Score=34.57 Aligned_cols=103 Identities=16% Similarity=0.114 Sum_probs=58.5
Q ss_pred HHHHHHHHCCCceeeceeEEEcc--CCCCCCCccCc--ceeeecCCCCeEEEEeccCCCcccccccccccCchhhHHHHH
Q 003985 318 EMLLRIKRQGLDISPKILIVTRL--IPDAKGTTCNQ--RLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFT 393 (781)
Q Consensus 318 eLa~~L~~~GheV~~~v~VlT~~--~p~~~~~~~~~--~~e~v~~~~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~ 393 (781)
.|.+.|.++||.|- |++-. .|-..|.--.. +.......+|+.|-.+|.+...| -+..-.
T Consensus 70 ~L~~~l~~~G~rVa----VlAVDPSSp~TGGsiLGDRiRM~~~~~~~~vFiRs~~srG~lG-------------GlS~at 132 (323)
T COG1703 70 ALGRELRERGHRVA----VLAVDPSSPFTGGSILGDRIRMQRLAVDPGVFIRSSPSRGTLG-------------GLSRAT 132 (323)
T ss_pred HHHHHHHHCCcEEE----EEEECCCCCCCCccccccHhhHHhhccCCCeEEeecCCCccch-------------hhhHHH
Confidence 67778899999998 66544 22223333333 33445555678888887776533 122333
Q ss_pred HHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCC
Q 003985 394 EDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHAL 440 (781)
Q Consensus 394 ~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~l 440 (781)
.++...+.+ ..+|+|+.-....+=.=.-++....+-++++..+.
T Consensus 133 ~~~i~~ldA---aG~DvIIVETVGvGQsev~I~~~aDt~~~v~~pg~ 176 (323)
T COG1703 133 REAIKLLDA---AGYDVIIVETVGVGQSEVDIANMADTFLVVMIPGA 176 (323)
T ss_pred HHHHHHHHh---cCCCEEEEEecCCCcchhHHhhhcceEEEEecCCC
Confidence 344444443 38999997776543222233444455566666554
No 201
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=56.08 E-value=1.8e+02 Score=31.15 Aligned_cols=35 Identities=26% Similarity=0.398 Sum_probs=23.0
Q ss_pred cCCCceEEEEcCC-----------CchHHHHHHHHHcCCcEEEEec
Q 003985 404 LQGFPDFIIGNYS-----------DGNLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 404 l~~~pDIIh~~~~-----------~~~lva~llar~~gvp~v~t~H 438 (781)
+..+||+|++--. .+-..|++-+...|+|-+..-.
T Consensus 88 ~~~~pDLVvSGIN~G~N~G~dv~ySGTVgAA~Ea~~~GiPsIA~S~ 133 (257)
T PRK13932 88 LPEKPDLIVSGINYGSNTATNTLYSGTVAAALEGAIQGIPSLAFSL 133 (257)
T ss_pred cCCCCCEEEECCcCCCCCCcCEecchhHHHHHHHHHcCCCeEEEEc
Confidence 3558999994211 1235566777788999887654
No 202
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=54.43 E-value=2e+02 Score=30.54 Aligned_cols=36 Identities=25% Similarity=0.389 Sum_probs=23.4
Q ss_pred cCCCceEEEE--cC---------CCchHHHHHHHHHcCCcEEEEecC
Q 003985 404 LQGFPDFIIG--NY---------SDGNLVASLLAYKMGITQCTIAHA 439 (781)
Q Consensus 404 l~~~pDIIh~--~~---------~~~~lva~llar~~gvp~v~t~H~ 439 (781)
+..+||+|++ |. +.+-..|++-+...|+|-+..-.+
T Consensus 83 ~~~~pDLVvSGiN~G~N~g~~v~ySGTVgAA~ea~~~GipaiA~S~~ 129 (244)
T TIGR00087 83 MPEVPDLVISGINAGENLGTDVTYSGTVGAAMEAAIHGVPAIAISLQ 129 (244)
T ss_pred ccCCCCeEEeccccCCCCCccEecchhHHHHHHHHHcCCCeEEEEec
Confidence 3568999994 21 112355667777889998876553
No 203
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=53.87 E-value=13 Score=37.75 Aligned_cols=33 Identities=18% Similarity=0.437 Sum_probs=26.5
Q ss_pred eEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEcc
Q 003985 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (781)
Q Consensus 279 ~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~ 340 (781)
|||+||...|.- | . ++++...++||+|+ -++|.
T Consensus 1 mKIaiIgAsG~~-----------G---s-----------~i~~EA~~RGHeVT----AivRn 33 (211)
T COG2910 1 MKIAIIGASGKA-----------G---S-----------RILKEALKRGHEVT----AIVRN 33 (211)
T ss_pred CeEEEEecCchh-----------H---H-----------HHHHHHHhCCCeeE----EEEeC
Confidence 799999988763 2 1 56778899999999 88877
No 204
>PRK06988 putative formyltransferase; Provisional
Probab=48.86 E-value=84 Score=34.56 Aligned_cols=19 Identities=32% Similarity=0.569 Sum_probs=12.4
Q ss_pred HHHHHHHHCCCceeeceeEEEc
Q 003985 318 EMLLRIKRQGLDISPKILIVTR 339 (781)
Q Consensus 318 eLa~~L~~~GheV~~~v~VlT~ 339 (781)
...+.|.+.|++|. .|+|.
T Consensus 16 ~~L~~L~~~~~~i~---~Vvt~ 34 (312)
T PRK06988 16 RCLQVLLARGVDVA---LVVTH 34 (312)
T ss_pred HHHHHHHhCCCCEE---EEEcC
Confidence 34556778899876 35554
No 205
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=48.47 E-value=3.1e+02 Score=27.86 Aligned_cols=94 Identities=13% Similarity=0.051 Sum_probs=54.3
Q ss_pred CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHH-cCCCCcEEEeccccCcCChHHHHHHH
Q 003985 584 VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT-YKLDGQFRWIAAQTNRARNGELYRYI 662 (781)
Q Consensus 584 ~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~e-l~L~~~V~flG~~~~~v~~~el~~~l 662 (781)
..-...+.+.+..+.+......++........ ........... .....++..... ..+..++..++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 255 (286)
T PF04230_consen 189 EEYIEEIAELIQRLLDKGYKIVLLPFSPSDDD----------EDDDDFNEIDIKAEKFFNVIIIDY---SLSPDELLELI 255 (286)
T ss_pred hhHHHHHHHHHHHhhcccceeEEEEeeeccch----------hhHHHHHhhhhhcccccceeEecC---CCCHHHHHHHH
Confidence 33445556666666554334445445544331 11111111110 222334444442 45678999999
Q ss_pred HccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC
Q 003985 663 ADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (781)
Q Consensus 663 a~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~ 696 (781)
+. ++++|...+ -..+=|+++|+|+|+-.
T Consensus 256 ~~-~~~~Is~Rl-----H~~I~a~~~g~P~i~i~ 283 (286)
T PF04230_consen 256 SQ-ADLVISMRL-----HGAILALSLGVPVIAIS 283 (286)
T ss_pred hc-CCEEEecCC-----HHHHHHHHcCCCEEEEe
Confidence 95 999998865 46788999999999864
No 206
>PLN02534 UDP-glycosyltransferase
Probab=45.97 E-value=2.9e+02 Score=32.44 Aligned_cols=77 Identities=10% Similarity=0.049 Sum_probs=45.1
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcE--EEEcCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccc-cCCeEEEE
Q 003985 641 GQFRWIAAQTNRARNGELYRYIADTKGA--FVQPAFYEAFGLTVVEAMTCGLPTFATCHG----GPAEIIE-HGASGFHI 713 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadv--fV~PS~~E~fGltvlEAMa~GlPVIaT~~G----G~~EiI~-dg~~G~lv 713 (781)
.++.+.| +++..++.. ..++ ||.- +-.++++||.++|+|+|+-... -....+. .-+.|+-+
T Consensus 344 ~g~~v~~----w~pq~~iL~----h~~v~~fvtH----~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~ 411 (491)
T PLN02534 344 RGLLIKG----WAPQVLILS----HPAIGGFLTH----CGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRV 411 (491)
T ss_pred CCeeccC----CCCHHHHhc----CCccceEEec----CccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEe
Confidence 4566666 555555554 3444 5554 3356999999999999997432 2222222 22334333
Q ss_pred C---------------CCCHHHHHHHHHHHH
Q 003985 714 D---------------PYHPDQAAELMADFF 729 (781)
Q Consensus 714 ~---------------p~d~e~lA~~I~~~l 729 (781)
. --+.+++++++.+++
T Consensus 412 ~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m 442 (491)
T PLN02534 412 GVEVPVRWGDEERVGVLVKKDEVEKAVKTLM 442 (491)
T ss_pred cccccccccccccccCccCHHHHHHHHHHHh
Confidence 1 025778888888776
No 207
>COG1647 Esterase/lipase [General function prediction only]
Probab=44.66 E-value=1.1e+02 Score=32.07 Aligned_cols=43 Identities=21% Similarity=0.257 Sum_probs=28.8
Q ss_pred HHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEec
Q 003985 394 EDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 394 ~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H 438 (781)
.+..+.+.. .+-..|.++--+.|+.++..++....++-+++.-
T Consensus 73 ~d~Y~~L~~--~gy~eI~v~GlSmGGv~alkla~~~p~K~iv~m~ 115 (243)
T COG1647 73 EDGYRDLKE--AGYDEIAVVGLSMGGVFALKLAYHYPPKKIVPMC 115 (243)
T ss_pred HHHHHHHHH--cCCCeEEEEeecchhHHHHHHHhhCCccceeeec
Confidence 344444443 3345577788889999999999998766555443
No 208
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=43.68 E-value=1.1e+02 Score=31.87 Aligned_cols=49 Identities=24% Similarity=0.276 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCceEEE---EcCCCc-hHHHHHHHHHcCCcEEEEec
Q 003985 388 YLETFTEDVGSEITAELQGFPDFII---GNYSDG-NLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 388 yl~~f~~~~~~~i~~~l~~~pDIIh---~~~~~~-~lva~llar~~gvp~v~t~H 438 (781)
|.+.+.....+.+-+.++ .. +|+ .||..+ -.-....++.+.+|.|++.-
T Consensus 56 yres~~ks~~rlldSalk-n~-~VIvDdtNYyksmRrqL~ceak~~~tt~ciIyl 108 (261)
T COG4088 56 YRESFLKSVERLLDSALK-NY-LVIVDDTNYYKSMRRQLACEAKERKTTWCIIYL 108 (261)
T ss_pred HHHHHHHHHHHHHHHHhc-ce-EEEEecccHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 566777777776666544 22 344 455554 34455677888899887643
No 209
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=42.47 E-value=2.2e+02 Score=33.19 Aligned_cols=97 Identities=7% Similarity=0.099 Sum_probs=63.4
Q ss_pred HHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCC-cEEEcC--ccccccccccCCeEEEECCCCHHHHHHHHHHHHHhc
Q 003985 656 GELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-PTFATC--HGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKC 732 (781)
Q Consensus 656 ~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl-PVIaT~--~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l 732 (781)
....+.+++ +-.+++|+-.+...-.++||+.+|| |||.++ .....+++.-..-++.++. +++-+.|.+.|..
T Consensus 335 ~~y~~~m~~-S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~~---~~v~~~~~~iL~~- 409 (464)
T KOG1021|consen 335 LNYMEGMQD-SKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVPE---KDVPELIKNILLS- 409 (464)
T ss_pred chHHHHhhc-CeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEEH---HHhhhHHHHHHHh-
Confidence 345667775 8888999999999999999999995 888886 3345555554555666653 3333334444422
Q ss_pred cCCHHHHHHHHHHHHHHHHHhcCcch
Q 003985 733 KENPSHWKKISDGGLKRIYERLVVSS 758 (781)
Q Consensus 733 ~~dp~~~~~~s~~a~~~v~~~ysw~~ 758 (781)
...+...+|.++-...+...+.|..
T Consensus 410 -i~~~~~~~m~~~v~~~v~r~~~~~~ 434 (464)
T KOG1021|consen 410 -IPEEEVLRMRENVIRLVPRHFLKKP 434 (464)
T ss_pred -cCHHHHHHHHHHHHHHHHhhEEeCC
Confidence 2234446666666656777787764
No 210
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=39.74 E-value=1.7e+02 Score=31.11 Aligned_cols=40 Identities=13% Similarity=0.134 Sum_probs=25.8
Q ss_pred HHHHHHHHcCCCceEEE-EcCCCc---hHHHHHHHHHcCCcEEEEec
Q 003985 396 VGSEITAELQGFPDFII-GNYSDG---NLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 396 ~~~~i~~~l~~~pDIIh-~~~~~~---~lva~llar~~gvp~v~t~H 438 (781)
+..++.+ .++++|+ +..+.. .--+.-+|+.+++|++-.-+
T Consensus 57 l~~~l~~---~~i~~VIDATHPfA~~is~~a~~ac~~~~ipyiR~eR 100 (248)
T PRK08057 57 LAAYLRE---EGIDLVIDATHPYAAQISANAAAACRALGIPYLRLER 100 (248)
T ss_pred HHHHHHH---CCCCEEEECCCccHHHHHHHHHHHHHHhCCcEEEEeC
Confidence 3444444 3788887 444443 45567788889999986544
No 211
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=39.10 E-value=64 Score=36.13 Aligned_cols=106 Identities=22% Similarity=0.161 Sum_probs=53.7
Q ss_pred cccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCC-CCCCccCcc-----eeeecCCCCeEEEEeccCCCcc
Q 003985 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPD-AKGTTCNQR-----LERVSGTEHTHILRVPFRSEKG 374 (781)
Q Consensus 301 ~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~-~~~~~~~~~-----~e~v~~~~~~~I~rvP~~~~~~ 374 (781)
+||+...|. |..|+++||+|. =++....+ ..+..|... .+.+...-|+..+.+-|.
T Consensus 11 SGGVDSSVa----------A~lLk~QGyeVi----Gl~m~~~~~~~~~~C~s~~d~~da~~va~~LGIp~~~vdf~---- 72 (356)
T COG0482 11 SGGVDSSVA----------AYLLKEQGYEVI----GLFMKNWDEDGGGGCCSEEDLRDAERVADQLGIPLYVVDFE---- 72 (356)
T ss_pred cCCHHHHHH----------HHHHHHcCCeEE----EEEEEeeccCCCCcCCchhHHHHHHHHHHHhCCceEEEchH----
Confidence 478766655 345899999998 55554333 222233321 223333334555554443
Q ss_pred cccccccccCchhhHHHHHHHHHHHHHHHc----CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCC
Q 003985 375 ILRQWISRFDVWPYLETFTEDVGSEITAEL----QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHAL 440 (781)
Q Consensus 375 ~~~~~isr~~i~~yl~~f~~~~~~~i~~~l----~~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H~l 440 (781)
+.|...+........ --.|| |.||...-.-.+.-.++.+|.-.+.|-|-.
T Consensus 73 ---------------~~y~~~V~~~f~~~Y~~G~TPNPc-i~CN~~iKF~~~l~~a~~lgad~iATGHYa 126 (356)
T COG0482 73 ---------------KEFWNKVFEYFLAEYKAGKTPNPC-ILCNKEIKFKALLDYAKELGADYIATGHYA 126 (356)
T ss_pred ---------------HHHHHHHHHHHHHHHhCCCCCCcc-hhcCHHHHHHHHHHHHHHcCCCeEEEeeeE
Confidence 233333333333222 22577 556554432222333444898999998853
No 212
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=38.45 E-value=3.9e+02 Score=26.80 Aligned_cols=110 Identities=9% Similarity=0.173 Sum_probs=65.7
Q ss_pred eEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHc-cCcEEEEcCCCCC----C
Q 003985 604 VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIAD-TKGAFVQPAFYEA----F 678 (781)
Q Consensus 604 ~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~-aadvfV~PS~~E~----f 678 (781)
.+++|+.+.+. ....+....++.+ .+..++.. ....+....+.. ..|++++-....+ -
T Consensus 4 ~~Ilivdd~~~-----------~~~~l~~~L~~~~---~~~~v~~~---~~~~~~~~~~~~~~~DlvllD~~l~~~~~~~ 66 (216)
T PRK10840 4 MNVIIADDHPI-----------VLFGIRKSLEQIE---WVNVVGEF---EDSTALINNLPKLDAHVLITDLSMPGDKYGD 66 (216)
T ss_pred eEEEEECCcHH-----------HHHHHHHHHhcCC---CCEEEEEE---CCHHHHHHHHHhCCCCEEEEeCcCCCCCCCC
Confidence 57777777654 2344555554432 23323211 123445555442 3688877543332 5
Q ss_pred cHHHHHHHH---cCCcEEE-cCcccc---ccccccCCeEEEECCCCHHHHHHHHHHHHH
Q 003985 679 GLTVVEAMT---CGLPTFA-TCHGGP---AEIIEHGASGFHIDPYHPDQAAELMADFFG 730 (781)
Q Consensus 679 GltvlEAMa---~GlPVIa-T~~GG~---~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~ 730 (781)
|+.+++.+. .++|||+ |..... .+.+..|..|++..|.+++++.++|..+..
T Consensus 67 g~~~~~~l~~~~~~~~iIvls~~~~~~~~~~a~~~Ga~~yl~K~~~~~~l~~ai~~v~~ 125 (216)
T PRK10840 67 GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQK 125 (216)
T ss_pred HHHHHHHHHHHCCCCcEEEEEecCCHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHHHC
Confidence 777777764 3567776 433332 244677999999999999999999987763
No 213
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=38.33 E-value=5.3e+02 Score=27.60 Aligned_cols=35 Identities=11% Similarity=0.226 Sum_probs=22.8
Q ss_pred cCCCceEEEEcCC-----------CchHHHHHHHHHcCCcEEEEec
Q 003985 404 LQGFPDFIIGNYS-----------DGNLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 404 l~~~pDIIh~~~~-----------~~~lva~llar~~gvp~v~t~H 438 (781)
+..+||+|++--. .+-..|++-+...|+|-+..-.
T Consensus 84 ~~~~pDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPsiA~S~ 129 (253)
T PRK13933 84 VPDNIDMVISGINKGLNIGNDILYSGTVSAAIEGAIYKVPSIAVSA 129 (253)
T ss_pred cCCCCCEEEECCcCCCCCCcCCccchhHHHHHHHHHcCCCeEEEEe
Confidence 4568999994111 1235566777788999886643
No 214
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=37.35 E-value=4.7e+02 Score=30.08 Aligned_cols=141 Identities=15% Similarity=0.168 Sum_probs=73.8
Q ss_pred CCEEEEEeeccC-----CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC--CCCcEE
Q 003985 572 KPIVFSMARLDH-----VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK--LDGQFR 644 (781)
Q Consensus 572 k~iIl~vGRL~~-----~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~--L~~~V~ 644 (781)
..++++.|.... .+-...++.+++++ +++.|+.+=..... . . +.+... -.++|.
T Consensus 278 ~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~----~~~~FiW~~~~~~~-----------~-~---~~~~~~~~~~~nV~ 338 (496)
T KOG1192|consen 278 SVVYISFGSMVNSADLPEEQKKELAKALESL----QGVTFLWKYRPDDS-----------I-Y---FPEGLPNRGRGNVV 338 (496)
T ss_pred CeEEEECCcccccccCCHHHHHHHHHHHHhC----CCceEEEEecCCcc-----------h-h---hhhcCCCCCcCceE
Confidence 556777787753 34444555666554 45666665554330 0 0 222221 135677
Q ss_pred EeccccCcCChHHHHHHHHc-cCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----Cccccccccc-cCCeEEEEC--CC
Q 003985 645 WIAAQTNRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIE-HGASGFHID--PY 716 (781)
Q Consensus 645 flG~~~~~v~~~el~~~la~-aadvfV~PS~~E~fGltvlEAMa~GlPVIaT----~~GG~~EiI~-dg~~G~lv~--p~ 716 (781)
..+ +++..++. +.. +.++||.= -|++ +++||..+|+|+++. |..-.+..+. +|..|.... -.
T Consensus 339 ~~~----W~PQ~~ll--l~H~~v~~FvTH---gG~n-St~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~ 408 (496)
T KOG1192|consen 339 LSK----WAPQNDLL--LDHPAVGGFVTH---GGWN-STLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLV 408 (496)
T ss_pred Eec----CCCcHHHh--cCCCcCcEEEEC---Cccc-HHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhcC
Confidence 766 44455544 221 12233331 2343 459999999999964 3334444444 455555442 22
Q ss_pred CHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 003985 717 HPDQAAELMADFFGKCKENPSHWKKISDGG 746 (781)
Q Consensus 717 d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a 746 (781)
+.+ +.+++..++ .++++.+...+-+
T Consensus 409 ~~~-~~~~~~~il----~~~~y~~~~~~l~ 433 (496)
T KOG1192|consen 409 SEE-LLEAIKEIL----ENEEYKEAAKRLS 433 (496)
T ss_pred cHH-HHHHHHHHH----cChHHHHHHHHHH
Confidence 333 666776665 6777665544433
No 215
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=37.03 E-value=3e+02 Score=33.17 Aligned_cols=159 Identities=10% Similarity=0.074 Sum_probs=97.8
Q ss_pred cccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC-
Q 003985 562 EHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD- 640 (781)
Q Consensus 562 ~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~- 640 (781)
..+|+ +.+..++...-.| .|=-...++.+.++.+..|+..|++.---.- -.+.++..++++|++
T Consensus 751 ~~y~L--p~d~vvf~~FNqL--yKidP~~l~~W~~ILk~VPnS~LwllrfPa~-----------ge~rf~ty~~~~Gl~p 815 (966)
T KOG4626|consen 751 SQYGL--PEDAVVFCNFNQL--YKIDPSTLQMWANILKRVPNSVLWLLRFPAV-----------GEQRFRTYAEQLGLEP 815 (966)
T ss_pred CCCCC--CCCeEEEeechhh--hcCCHHHHHHHHHHHHhCCcceeEEEecccc-----------chHHHHHHHHHhCCCc
Confidence 45777 4444444444333 4444567777777777788888877654322 136788899999985
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-------ccccccccccCCeEEEE
Q 003985 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-------HGGPAEIIEHGASGFHI 713 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~-------~GG~~EiI~dg~~G~lv 713 (781)
++|.|... ...+|-.+-.. -+||.+=+..+-|. .|-.|.+-+|+|+|.-. +++. .... -+.|-+|
T Consensus 816 ~riifs~v----a~k~eHvrr~~-LaDv~LDTplcnGh-TTg~dvLw~GvPmVTmpge~lAsrVa~S-ll~~-~Gl~hli 887 (966)
T KOG4626|consen 816 DRIIFSPV----AAKEEHVRRGQ-LADVCLDTPLCNGH-TTGMDVLWAGVPMVTMPGETLASRVAAS-LLTA-LGLGHLI 887 (966)
T ss_pred cceeeccc----cchHHHHHhhh-hhhhcccCcCcCCc-ccchhhhccCCceeecccHHHHHHHHHH-HHHH-cccHHHH
Confidence 68888873 22344444444 37888877666553 35567788999998642 2221 1111 1233344
Q ss_pred CCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Q 003985 714 DPYHPDQAAELMADFFGKCKENPSHWKKISDGGLK 748 (781)
Q Consensus 714 ~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~ 748 (781)
..+-++..+.-.++- .|.+..+++...-+.
T Consensus 888 -ak~~eEY~~iaV~La----td~~~L~~lr~~l~~ 917 (966)
T KOG4626|consen 888 -AKNREEYVQIAVRLA----TDKEYLKKLRAKLRK 917 (966)
T ss_pred -hhhHHHHHHHHHHhh----cCHHHHHHHHHHHHH
Confidence 246777777766654 888888887665544
No 216
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=36.99 E-value=1.6e+02 Score=30.59 Aligned_cols=30 Identities=27% Similarity=0.368 Sum_probs=20.3
Q ss_pred CCceEEEEcCCC--chHHHHHHHHH-cCCcEEE
Q 003985 406 GFPDFIIGNYSD--GNLVASLLAYK-MGITQCT 435 (781)
Q Consensus 406 ~~pDIIh~~~~~--~~lva~llar~-~gvp~v~ 435 (781)
.+.|++.+-... .|.++..++++ +|+|.++
T Consensus 65 ~~aD~vva~t~~d~~N~i~~~la~~~~gv~~vi 97 (225)
T COG0569 65 DDADAVVAATGNDEVNSVLALLALKEFGVPRVI 97 (225)
T ss_pred CcCCEEEEeeCCCHHHHHHHHHHHHhcCCCcEE
Confidence 478888854433 37777777766 8888764
No 217
>PLN02764 glycosyltransferase family protein
Probab=36.61 E-value=4e+02 Score=30.99 Aligned_cols=38 Identities=16% Similarity=0.410 Sum_probs=27.2
Q ss_pred eEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccC
Q 003985 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLI 341 (781)
Q Consensus 279 ~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~ 341 (781)
+.|+++. ||+| |-.+-.+ +|++.|+.+|+.|+ ++|...
T Consensus 6 ~Hvvl~P---~paq----------GHi~P~l--------~LAk~La~~g~~vT----~~tt~~ 43 (453)
T PLN02764 6 FHVLMYP---WFAT----------GHMTPFL--------FLANKLAEKGHTVT----FLLPKK 43 (453)
T ss_pred cEEEEEC---Cccc----------ccHHHHH--------HHHHHHHhCCCEEE----EEeCcc
Confidence 4788884 4443 6666667 67777889999999 887653
No 218
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=35.52 E-value=5.8e+02 Score=27.31 Aligned_cols=35 Identities=20% Similarity=0.374 Sum_probs=22.8
Q ss_pred cCCCceEEEEcCC-----------CchHHHHHHHHHcCCcEEEEec
Q 003985 404 LQGFPDFIIGNYS-----------DGNLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 404 l~~~pDIIh~~~~-----------~~~lva~llar~~gvp~v~t~H 438 (781)
+..+||+|++--. .+-..|+.-+...|+|-+..-.
T Consensus 83 ~~~~pDLVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~ 128 (253)
T PRK13935 83 MDKKVDLVISGINRGPNLGTDVLYSGTVSGALEGAMMGVPSIAISS 128 (253)
T ss_pred ccCCCCEEEeCCccCCCCCcCCcccHhHHHHHHHHhcCCCeEEEEc
Confidence 3568999994111 1235566677778999887654
No 219
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=34.52 E-value=2.8e+02 Score=29.26 Aligned_cols=34 Identities=12% Similarity=0.002 Sum_probs=21.9
Q ss_pred CCCceEEEE--cCCCchHHHHHHHHHcCCcEEEEec
Q 003985 405 QGFPDFIIG--NYSDGNLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 405 ~~~pDIIh~--~~~~~~lva~llar~~gvp~v~t~H 438 (781)
...+|.|.. ....+.-+.-.+-+.+|+|++....
T Consensus 179 ~~~aDAifisCTnLrt~~vi~~lE~~lGkPVlsSNq 214 (239)
T TIGR02990 179 DPDADALFLSCTALRAATCAQRIEQAIGKPVVTSNQ 214 (239)
T ss_pred CCCCCEEEEeCCCchhHHHHHHHHHHHCCCEEEHHH
Confidence 346887773 3333445556677789999986544
No 220
>COG3580 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=34.26 E-value=3.7e+02 Score=29.67 Aligned_cols=166 Identities=9% Similarity=0.008 Sum_probs=90.7
Q ss_pred EEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcC
Q 003985 574 IVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRA 653 (781)
Q Consensus 574 iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v 653 (781)
.|+..--|.-..+....-..|..+ .++ |+.-...+ +++.+.--+....+ |-|.- .+
T Consensus 23 ~IGiPRvLn~ye~yPff~tffteL-----Gf~-VVlS~~S~-------------kely~~G~~ti~se-vCfPa----ki 78 (351)
T COG3580 23 TIGIPRVLNMYEYYPFFHTFFTEL-----GFR-VVLSPKSS-------------KELYEKGIETIPSE-VCFPA----KI 78 (351)
T ss_pred eecchHHHHHhhccHHHHHHHHHc-----Cce-EEeCCCCc-------------HHHHHhhhhhCCcc-ceece----ee
Confidence 444444444455555555555444 356 33333322 23444444444444 77876 78
Q ss_pred ChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc-------CccccccccccCCeEEEECCCCHHHHHHHHH
Q 003985 654 RNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-------CHGGPAEIIEHGASGFHIDPYHPDQAAELMA 726 (781)
Q Consensus 654 ~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT-------~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~ 726 (781)
.++.++.++....|....|+..--++-- -+--..-||+|++ +..+..|-+ .-..++ ++-.|.+.+.+.+.
T Consensus 79 ~HGHi~~L~~K~~d~IFyP~l~~~~~E~-~a~n~~~CP~V~~~pEvik~nip~l~d~v-~~~~P~-~~l~~~~~~~~~~~ 155 (351)
T COG3580 79 SHGHIMDLIKKGIDYIFYPCLRYIKSEQ-SANNHYNCPIVQSYPEVIKNNIPDLRDGV-MYLYPF-LDLENKELLKEQFY 155 (351)
T ss_pred chhHHHHHHHcCCCeEEecccccccccc-cccccccCccccCcHHHHHhcCccccccc-eeecce-ecccchhHHHHHHH
Confidence 8999999999889999999863222221 2233456888876 234444300 011233 34457788888888
Q ss_pred HHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003985 727 DFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 727 ~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll~ 770 (781)
..+..|-.... ..+.|.+.+.+.+.--+..+...+++++.
T Consensus 156 ~~~~~~~~s~~----E~~~Avqka~~~~~e~r~dir~k~~e~L~ 195 (351)
T COG3580 156 KVFKEIGLSKE----ENEEAVQKAWKEGEEYREDIRKKGEEVLK 195 (351)
T ss_pred HHHHhcCchHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88876654433 33334444433333223456666777664
No 221
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=33.26 E-value=36 Score=38.68 Aligned_cols=38 Identities=24% Similarity=0.621 Sum_probs=27.6
Q ss_pred eEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCCCC
Q 003985 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGT 347 (781)
Q Consensus 279 ~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~~~ 347 (781)
|||++|....+ |+++|.. |.+.||+|. .|+| +|+..|.
T Consensus 1 mkiaiigqs~f-------------g~~vy~~-------------lrk~gheiv---~vft--ipdk~g~ 38 (881)
T KOG2452|consen 1 MKIAVIGQSLF-------------GQEVYCH-------------LRKEGHEVV---GVFT--VPDKDGK 38 (881)
T ss_pred CeeEEechhhh-------------hHHHHHH-------------HHhcCceEE---EEEE--ecCCCCC
Confidence 79999986555 7888876 899999985 3554 5565544
No 222
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=33.00 E-value=1e+02 Score=31.49 Aligned_cols=49 Identities=20% Similarity=0.339 Sum_probs=39.0
Q ss_pred chhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEE
Q 003985 385 VWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQC 434 (781)
Q Consensus 385 i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~v 434 (781)
-|..+......+++.+.+. +.+||+|++-.-.|-..|.+++..+|+.-+
T Consensus 8 Sw~~I~~~~~~lA~kI~~s-~~~PDvIiaiaRGG~~pariLsd~L~~~~l 56 (192)
T COG2236 8 SWEEIHRLCRALAEKIRAS-GFKPDVIVAIARGGLIPARILSDFLGVKPL 56 (192)
T ss_pred cHHHHHHHHHHHHHHHHHc-CCCCCEEEEEcCCceehHHHHHHHhCCCce
Confidence 3566667777777777754 679999999988888999999999997533
No 223
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=32.77 E-value=2.4e+02 Score=28.85 Aligned_cols=74 Identities=12% Similarity=0.137 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCc-EEEEcCCCCCCcHHHHHHHHcCCcEEEcCcc
Q 003985 625 AEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKG-AFVQPAFYEAFGLTVVEAMTCGLPTFATCHG 698 (781)
Q Consensus 625 ~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aad-vfV~PS~~E~fGltvlEAMa~GlPVIaT~~G 698 (781)
...+.+++.+++++..-.+.+.+.-+.......+-++++...| +++.|...+...-.+-++...|+|||..+.+
T Consensus 15 ~~~~g~~~~a~~~g~~~~~~~~~~~d~~~q~~~i~~~i~~~~d~Iiv~~~~~~~~~~~l~~~~~~gIpvv~~d~~ 89 (257)
T PF13407_consen 15 QVIKGAKAAAKELGYEVEIVFDAQNDPEEQIEQIEQAISQGVDGIIVSPVDPDSLAPFLEKAKAAGIPVVTVDSD 89 (257)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEESTTTHHHHHHHHHHHHHTTESEEEEESSSTTTTHHHHHHHHHTTSEEEEESST
T ss_pred HHHHHHHHHHHHcCCEEEEeCCCCCCHHHHHHHHHHHHHhcCCEEEecCCCHHHHHHHHHHHhhcCceEEEEecc
Confidence 3445566666666553222211211111112223334444455 5556777777777788899999999998777
No 224
>PLN00016 RNA-binding protein; Provisional
Probab=32.27 E-value=45 Score=37.33 Aligned_cols=20 Identities=15% Similarity=0.275 Sum_probs=16.9
Q ss_pred HHHHHHHHCCCceeeceeEEEccC
Q 003985 318 EMLLRIKRQGLDISPKILIVTRLI 341 (781)
Q Consensus 318 eLa~~L~~~GheV~~~v~VlT~~~ 341 (781)
.|++.|.++||+|+ +++|..
T Consensus 71 ~lv~~L~~~G~~V~----~l~R~~ 90 (378)
T PLN00016 71 YLAKELVKAGHEVT----LFTRGK 90 (378)
T ss_pred HHHHHHHHCCCEEE----EEecCC
Confidence 67778899999999 998874
No 225
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=31.35 E-value=4.6e+02 Score=31.27 Aligned_cols=127 Identities=13% Similarity=0.147 Sum_probs=80.0
Q ss_pred CCCEEEEEeeccC-CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 003985 571 SKPIVFSMARLDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (781)
Q Consensus 571 ~k~iIl~vGRL~~-~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~ 649 (781)
.++.-+..|.-.. .||-+..++.+.+..+ ++-.|.+.... ...+++-|.=+|
T Consensus 276 r~~~AlVyGK~~~~w~~k~~~l~~l~~~~e----ih~tV~~~~~~---------------------~~~~P~~V~NHG-- 328 (559)
T PF15024_consen 276 RKNQALVYGKERYMWKGKEKYLDVLHKYME----IHGTVYDEPQR---------------------PPNVPSFVKNHG-- 328 (559)
T ss_pred ccceeEEEccchhhhcCcHHHHHHHHhhcE----EEEEeccCCCC---------------------CcccchhhhhcC--
Confidence 3444455555443 5677777777766432 44444333221 112333344556
Q ss_pred cCcCChHHHHHHHHccCcEEEEcCC-CCCCcHHHHHHHHcCCcEEEcCcccccc-------------------------c
Q 003985 650 TNRARNGELYRYIADTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAE-------------------------I 703 (781)
Q Consensus 650 ~~~v~~~el~~~la~aadvfV~PS~-~E~fGltvlEAMa~GlPVIaT~~GG~~E-------------------------i 703 (781)
..+..++...+.. +-+||=--. +| |-+.+||+|.|+|-|-.....+.- .
T Consensus 329 --~l~~~ef~~lL~~-akvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~ 403 (559)
T PF15024_consen 329 --ILSGDEFQQLLRK-AKVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEF 403 (559)
T ss_pred --cCCHHHHHHHHHh-hhEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhh
Confidence 5667899999996 888886532 45 558899999999988875433321 1
Q ss_pred cccCCeEEEECCCCHHHHHHHHHHHHH
Q 003985 704 IEHGASGFHIDPYHPDQAAELMADFFG 730 (781)
Q Consensus 704 I~dg~~G~lv~p~d~e~lA~~I~~~l~ 730 (781)
| ..-.-+.|+-+|.+++-++|.+++.
T Consensus 404 i-G~PhVytVd~~n~~~v~~Avk~il~ 429 (559)
T PF15024_consen 404 I-GEPHVYTVDINNSTEVEAAVKAILA 429 (559)
T ss_pred C-CCCeEEEEcCCCHHHHHHHHHHHHh
Confidence 1 1124677899999999999998884
No 226
>TIGR00732 dprA DNA protecting protein DprA. Disruption of this gene in both Haemophilus influenzae and Helicobacter pylori drastically reduces the efficiency of transformation with exogenous DNA, but with different levels of effect on chromosomal (linear) and plasmid (circular) DNA. This difference suggests the DprA is not active in recombination, and it has been shown not to affect DNA binding, leaving the intermediate step in natural transformation, DNA processing. In Strep. pneumoniae, inactivation of dprA had no effect on the uptake of DNA. All of these data indicated that DprA is required at a later stage in transformation. Subsequently DprA and RecA were both shown in S. pneumoniae to be required to protect incoming ssDNA from immediate degradation. Role of DprA in non-transformable species is not known. The gene symbol smf was assigned in E. coli, but without assignment of function.
Probab=31.14 E-value=3.6e+02 Score=28.08 Aligned_cols=125 Identities=16% Similarity=0.116 Sum_probs=62.4
Q ss_pred CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC-CCCcE-EEe-ccccCcCChHHHHH
Q 003985 584 VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK-LDGQF-RWI-AAQTNRARNGELYR 660 (781)
Q Consensus 584 ~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~-L~~~V-~fl-G~~~~~v~~~el~~ 660 (781)
.+|++..+.-.+... ....+.|+|+|.+... + .+-.++.+.+.+.| +- | .|. +....+..-..--+
T Consensus 82 A~GiD~~ah~~al~~---~g~tIaVl~~gld~~y---p---~~n~~l~~~i~~~ggll--iSe~p~~~~~~~~~f~~RNr 150 (220)
T TIGR00732 82 ALGIDGIAHKAALKV---NGRTIAVLGTGLDQIY---P---RQNSKLAAKIAENGGLL--LSEYPPDTKPIKYNFPKRNR 150 (220)
T ss_pred hhhHHHHHHHHHHHc---CCCEEEEECCCCccCC---c---hhhHHHHHHHHHcCCEE--EEecCCCCCCCcccHHHHHH
Confidence 578888776554332 2457778888865211 1 11233443343333 20 0 010 11000101112234
Q ss_pred HHHccCcEEEEcCCCCCCc--HHHHHHHHcCCcEEEcC-------ccccccccccCCeEEEECCCCHHHHHH
Q 003985 661 YIADTKGAFVQPAFYEAFG--LTVVEAMTCGLPTFATC-------HGGPAEIIEHGASGFHIDPYHPDQAAE 723 (781)
Q Consensus 661 ~la~aadvfV~PS~~E~fG--ltvlEAMa~GlPVIaT~-------~GG~~EiI~dg~~G~lv~p~d~e~lA~ 723 (781)
+++..++..|...-.+.-| .++-.|+..|+||++-. ..|...+|++|. ..+. +.+++.+
T Consensus 151 iia~ls~~vivve~~~~sGtl~ta~~A~~~gr~v~~~pg~~~~~~~~G~~~Li~~GA-~~i~---~~~d~~~ 218 (220)
T TIGR00732 151 IISGLSRAVLVVEAPLKSGALITARYALEQGREVFAYPGDLNSPESDGCHKLIEQGA-ALIT---SAKDILE 218 (220)
T ss_pred HHHHhcCEEEEEECCCCCchHHHHHHHHHhCCcEEEEcCCCCCccchHHHHHHHCCC-EEEC---CHHHHHH
Confidence 4444455544443333334 57889999999999972 246778888773 3333 4555543
No 227
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=30.74 E-value=1.6e+02 Score=31.51 Aligned_cols=34 Identities=15% Similarity=0.026 Sum_probs=26.2
Q ss_pred CceEEEEcC----CCchHHHHHHHHHcCCcEEEEecCC
Q 003985 407 FPDFIIGNY----SDGNLVASLLAYKMGITQCTIAHAL 440 (781)
Q Consensus 407 ~pDIIh~~~----~~~~lva~llar~~gvp~v~t~H~l 440 (781)
.||+|.|-. .+++.++..+|..+|+|++..+-.+
T Consensus 112 ~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~l 149 (256)
T PRK03359 112 GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSKI 149 (256)
T ss_pred CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEEE
Confidence 599999532 2347899999999999998776543
No 228
>COG3171 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=30.72 E-value=41 Score=31.14 Aligned_cols=32 Identities=38% Similarity=0.661 Sum_probs=27.0
Q ss_pred HhhhcCCcccc----CCcHHHHHHHHHHHHHhhcCC
Q 003985 232 VLQGMGFEKGW----GDTAEHVLEMMHLLLDILQAP 263 (781)
Q Consensus 232 ~~~~~~~~~gw----g~~~~~~~~~~~~~~~~~~~p 263 (781)
+||+|||..-| |..|+-+-|++..+.|-+.+|
T Consensus 25 EFQeLgF~v~~~~~eg~~ae~~dea~drFidevI~~ 60 (119)
T COG3171 25 EFQELGFSVQWSFHEGTSAEDVDEAVDRFIDEVIAP 60 (119)
T ss_pred HHHhhheeeEEEecCCccHHHHHHHHHHHHHHHHcc
Confidence 59999999999 778999999998887666564
No 229
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=30.16 E-value=5.9e+02 Score=26.67 Aligned_cols=125 Identities=8% Similarity=-0.032 Sum_probs=62.1
Q ss_pred CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcH-H
Q 003985 603 LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGL-T 681 (781)
Q Consensus 603 ~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGl-t 681 (781)
.+++.+|..... .+++++++ .++|+|... ....++ +.+ +++.+...--+...- .
T Consensus 48 gA~VtVVap~i~-------------~el~~l~~----~~~i~~~~r---~~~~~d----l~g-~~LViaATdD~~vN~~I 102 (223)
T PRK05562 48 GCYVYILSKKFS-------------KEFLDLKK----YGNLKLIKG---NYDKEF----IKD-KHLIVIATDDEKLNNKI 102 (223)
T ss_pred CCEEEEEcCCCC-------------HHHHHHHh----CCCEEEEeC---CCChHH----hCC-CcEEEECCCCHHHHHHH
Confidence 567777776544 23444433 356777752 222222 333 554444433333333 3
Q ss_pred HHHHHHcCCcEEEcCccccccc-----cccCCeEEEE-CCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH
Q 003985 682 VVEAMTCGLPTFATCHGGPAEI-----IEHGASGFHI-DPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (781)
Q Consensus 682 vlEAMa~GlPVIaT~~GG~~Ei-----I~dg~~G~lv-~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~ 752 (781)
.-+|.+.|.+|...+.....++ +..|.--+-| .-+....+|..|.+-++.+..+-..+-+.....|+.+.+
T Consensus 103 ~~~a~~~~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST~G~sP~lar~lR~~ie~~l~~~~~l~~~l~~~R~~vk~ 179 (223)
T PRK05562 103 RKHCDRLYKLYIDCSDYKKGLCIIPYQRSTKNFVFALNTKGGSPKTSVFIGEKVKNFLKKYDDFIEYVTKIRNKAKK 179 (223)
T ss_pred HHHHHHcCCeEEEcCCcccCeEEeeeEEecCCEEEEEECCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4566677999988765544443 3333322222 223344556656555554443434444455555665544
No 230
>KOG0832 consensus Mitochondrial/chloroplast ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=29.64 E-value=6.4e+02 Score=26.65 Aligned_cols=58 Identities=16% Similarity=0.230 Sum_probs=39.0
Q ss_pred CcEEEEcCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCCeEEEECCCC-HHHHHHHHHHHH
Q 003985 666 KGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYH-PDQAAELMADFF 729 (781)
Q Consensus 666 advfV~PS~~E~fGltvlEAMa~GlPVIaT-~~GG~~EiI~dg~~G~lv~p~d-~e~lA~~I~~~l 729 (781)
.|++|.-...|.. .+++||.-+++|+|+- |....++.| -+-|+.+| .-...+-+..++
T Consensus 174 ~D~vvvln~~e~~-sAilEA~K~~IPTIgIVDtN~~P~li-----TYpVPaNDDs~~sv~f~~~l~ 233 (251)
T KOG0832|consen 174 PDLVVVLNPEENH-SAILEAAKMAIPTIGIVDTNCNPELI-----TYPVPANDDSPASVEFILNLL 233 (251)
T ss_pred cceeEecCccccc-HHHHHHHHhCCCeEEEecCCCCccce-----eeccCCCCCcHHHHHHHHHHH
Confidence 3788887777764 5899999999999996 555666666 34565543 333344555444
No 231
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=29.62 E-value=2e+02 Score=30.58 Aligned_cols=40 Identities=13% Similarity=0.034 Sum_probs=26.0
Q ss_pred HHHHHHHHcCCCceEEE-EcCCCc---hHHHHHHHHHcCCcEEEEec
Q 003985 396 VGSEITAELQGFPDFII-GNYSDG---NLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 396 ~~~~i~~~l~~~pDIIh-~~~~~~---~lva~llar~~gvp~v~t~H 438 (781)
+..++.+ .++++|+ +..+.. .--+.-+++.+|+|++-.-+
T Consensus 58 l~~~l~~---~~i~~vIDATHPfA~~is~na~~a~~~~~ipylR~eR 101 (249)
T PF02571_consen 58 LAEFLRE---NGIDAVIDATHPFAAEISQNAIEACRELGIPYLRFER 101 (249)
T ss_pred HHHHHHh---CCCcEEEECCCchHHHHHHHHHHHHhhcCcceEEEEc
Confidence 3444443 3788888 444443 45577788899999986554
No 232
>TIGR03642 cas_csx13 CRISPR-associated protein, Csx13 family. This model describes a protein N-terminal protein sequence domain strictly associated with CRISPR and CRISPR-associated protein systems. This model and TIGR02584 identify two separate clades from a larger homology domain family, both CRISPR-associated, while other homologs are found that may not be. Members are found in bacteria that include Pelotomaculum thermopropionicum SI, Thermoanaerobacter tengcongensis MB4, and Roseiflexus sp. RS-1, and in archaea that include Thermoplasma volcanium, Picrophilus torridus, and Methanospirillum hungatei. The molecular function is unknown.
Probab=29.46 E-value=2e+02 Score=27.33 Aligned_cols=102 Identities=18% Similarity=0.176 Sum_probs=48.9
Q ss_pred HHHHHHHHCCCceeeceeEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHH
Q 003985 318 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVG 397 (781)
Q Consensus 318 eLa~~L~~~GheV~~~v~VlT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~ 397 (781)
+...+|.++|..+. .|.+++...+...........+-.......+|..++..-. ...--.-...+...+.
T Consensus 9 Etl~aL~~~g~~i~-ev~lI~T~~~~v~~~~~~l~~~l~~~~~~~~i~~i~~~~~---------DI~t~~d~~~~~~~I~ 78 (124)
T TIGR03642 9 EAIDYLKKKGEPIS-DVILIYTKDPYVLSALRALKDSLLKKFYKAEVHKIPLKFD---------DILSDEDILTFMSIAA 78 (124)
T ss_pred HHHHHHHhcCCCCC-eEEEEEcCCHHHHHHHHHHHHHhHHhcCCcEEEEeccCcc---------ccCCHHHHHHHHHHHH
Confidence 66778899999866 5555554433221000000000001112345544442210 1111112345555555
Q ss_pred HHHHHHcCCCce--EEEEcCCCc----hHHHHHHHHHcC
Q 003985 398 SEITAELQGFPD--FIIGNYSDG----NLVASLLAYKMG 430 (781)
Q Consensus 398 ~~i~~~l~~~pD--IIh~~~~~~----~lva~llar~~g 430 (781)
+.+... ..+++ -+|.+-+.| ++.+.+++..+|
T Consensus 79 ~~i~~l-~~~~~~~~lh~~iaGGRK~Ms~~~~~a~sl~g 116 (124)
T TIGR03642 79 KEVKKE-RENYGCERIIVNISGGRKIMTIILALYAQLLF 116 (124)
T ss_pred HHHHHH-hhCCCcceEEEEecCCHHHHHHHHHHHHHHhC
Confidence 555544 34565 699888876 566666666665
No 233
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=28.92 E-value=1e+02 Score=30.57 Aligned_cols=40 Identities=25% Similarity=0.489 Sum_probs=0.0
Q ss_pred HHHHHHHHccCcEEEEcCC----CCCCcHH--HHHHHHcCCcEEEc
Q 003985 656 GELYRYIADTKGAFVQPAF----YEAFGLT--VVEAMTCGLPTFAT 695 (781)
Q Consensus 656 ~el~~~la~aadvfV~PS~----~E~fGlt--vlEAMa~GlPVIaT 695 (781)
..+.+-+.+.+|++|.--+ .|+-|+. +.+|++.|+||+++
T Consensus 84 ~~l~~al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~ 129 (159)
T PF10649_consen 84 AALRRALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTA 129 (159)
T ss_pred HHHHHHHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEE
No 234
>COG4195 Phage-related replication protein [General function prediction only]
Probab=28.88 E-value=64 Score=32.66 Aligned_cols=61 Identities=25% Similarity=0.238 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHhhcCCCcccHhhhhcCCCCceEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHH
Q 003985 246 AEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRI 323 (781)
Q Consensus 246 ~~~~~~~~~~~~~~~~~p~~~~~~~f~~r~p~~~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L 323 (781)
+++.-....-|.+..++-|+..+..- +. --+|+|++||| ||++--+.|+||+++++-+-+|
T Consensus 8 ~~d~y~~f~~Lse~esp~dy~ii~~e--~~--~S~v~ilapHG-------------G~IE~GvSELare~s~e~S~yl 68 (208)
T COG4195 8 AEDEYSNFASLSENESPVDYGIIYTE--KL--GSRVLILAPHG-------------GGIEGGVSELAREFSDEYSGYL 68 (208)
T ss_pred ccccccCHHHHHhccCcccCCeEEee--cc--CceEEEEeccC-------------CccCccHHHHHHHHHHHHHHHH
Confidence 44444455566665554445444321 11 23799999997 6777778989998877755444
No 235
>COG1830 FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
Probab=28.51 E-value=5.4e+02 Score=27.71 Aligned_cols=125 Identities=14% Similarity=0.199 Sum_probs=66.6
Q ss_pred EEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcC
Q 003985 574 IVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRA 653 (781)
Q Consensus 574 iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v 653 (781)
+-+++|.-.+.+.+..+.++...-.+..-.+-+.+..-|+...+.. ....+.....-++..++|-+ |.=..+..+
T Consensus 116 ~~Vy~Gse~e~~~i~~~~~v~~~a~~~Gmp~v~~~YpRg~~~~~~~-~~d~~~v~~aaRlaaelGAD--IiK~~ytg~-- 190 (265)
T COG1830 116 ATVYVGSETEREMIENISQVVEDAHELGMPLVAWAYPRGPAIKDEY-HRDADLVGYAARLAAELGAD--IIKTKYTGD-- 190 (265)
T ss_pred EEEecCCcchHHHHHHHHHHHHHHHHcCCceEEEEeccCCcccccc-cccHHHHHHHHHHHHHhcCC--eEeecCCCC--
Confidence 4567787777777777766666665554344455566665532210 11222334444455555532 322222111
Q ss_pred ChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccc------------ccccCCeEEE-----ECCC
Q 003985 654 RNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE------------IIEHGASGFH-----IDPY 716 (781)
Q Consensus 654 ~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~E------------iI~dg~~G~l-----v~p~ 716 (781)
. |.|--++ -+||+|||.+ ||+.. .++.|..|.. +...
T Consensus 191 --~-------------------e~F~~vv---~~~~vpVvia--GG~k~~~~~~~l~~~~~ai~aGa~G~~~GRNifQ~~ 244 (265)
T COG1830 191 --P-------------------ESFRRVV---AACGVPVVIA--GGPKTETEREFLEMVTAAIEAGAMGVAVGRNIFQHE 244 (265)
T ss_pred --h-------------------HHHHHHH---HhCCCCEEEe--CCCCCCChHHHHHHHHHHHHccCcchhhhhhhhccC
Confidence 1 2332222 3677888887 33333 3445666665 3556
Q ss_pred CHHHHHHHHHHHH
Q 003985 717 HPDQAAELMADFF 729 (781)
Q Consensus 717 d~e~lA~~I~~~l 729 (781)
++++++++|..+.
T Consensus 245 ~p~~m~~Ai~~Iv 257 (265)
T COG1830 245 DPEAMVKAIQAIV 257 (265)
T ss_pred ChHHHHHHHHHHh
Confidence 8888888887665
No 236
>PRK04531 acetylglutamate kinase; Provisional
Probab=28.43 E-value=1.5e+02 Score=33.92 Aligned_cols=55 Identities=7% Similarity=0.109 Sum_probs=34.9
Q ss_pred CCCCEEEEEee-ccCCCChHHHHHHHHHhhccCCCeEEEEE-eCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003985 570 RSKPIVFSMAR-LDHVKNMTGLVECYGKNSQLRELVNLVVV-AGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (781)
Q Consensus 570 ~~k~iIl~vGR-L~~~Kgl~~LieA~~~l~~~~~~~~LvIV-G~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~ 642 (781)
+.+..++-+|. +-. .+++.++..++.+... +.++||| |+|+. +.++.++.|++.+
T Consensus 35 ~~~~~VIKiGG~~l~-~~~~~l~~dla~L~~~--G~~~VlVHGggpq---------------I~~~l~~~gie~~ 91 (398)
T PRK04531 35 AERFAVIKVGGAVLR-DDLEALASSLSFLQEV--GLTPIVVHGAGPQ---------------LDAELDAAGIEKE 91 (398)
T ss_pred CCcEEEEEEChHHhh-cCHHHHHHHHHHHHHC--CCcEEEEECCCHH---------------HHHHHHHcCCCcE
Confidence 34555666654 322 3568888888887664 3555555 66543 6677888888754
No 237
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=28.11 E-value=3.1e+02 Score=28.41 Aligned_cols=125 Identities=18% Similarity=0.121 Sum_probs=68.6
Q ss_pred cCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCC-cEEEeccccCcCChHHHHH
Q 003985 582 DHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDG-QFRWIAAQTNRARNGELYR 660 (781)
Q Consensus 582 ~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~-~V~flG~~~~~v~~~el~~ 660 (781)
+-.|=+..|..|+.-+... ..-++++||..+. ....+++.++..|..- .=+|+|- ...+..+..
T Consensus 47 dL~kT~~~L~~A~~~i~~~-~~~~ILfVgTk~~-----------~~~~v~k~A~~~g~~~v~~RWlgG---~LTN~~~~~ 111 (204)
T PRK04020 47 DVRKTDERIRIAAKFLSRY-EPEKILVVSSRQY-----------GQKPVQKFAEVVGAKAITGRFIPG---TLTNPSLKG 111 (204)
T ss_pred cHHHHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-----------HHHHHHHHHHHhCCeeecCccCCC---cCcCcchhc
Confidence 3345555666666555443 3467888988764 2345556666655321 1168872 222323322
Q ss_pred HHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCCeEEEECCCC-HHHHHHHHHHHH
Q 003985 661 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYH-PDQAAELMADFF 729 (781)
Q Consensus 661 ~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT-~~GG~~EiI~dg~~G~lv~p~d-~e~lA~~I~~~l 729 (781)
++- =|+.+...-. .=..++.||.-.|+||||- |....++.| -+.++.+| .-.....+..++
T Consensus 112 ~~~--Pdliiv~dp~-~~~~AI~EA~kl~IP~IaivDTn~dp~~V-----dypIP~Ndds~~SI~li~~ll 174 (204)
T PRK04020 112 YIE--PDVVVVTDPR-GDAQAVKEAIEVGIPVVALCDTDNLTSNV-----DLVIPTNNKGRKALALVYWLL 174 (204)
T ss_pred cCC--CCEEEEECCc-ccHHHHHHHHHhCCCEEEEEeCCCCcccC-----ceeECCCCchHHHHHHHHHHH
Confidence 221 3343333221 1267899999999999995 566666665 35676654 333344444444
No 238
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=27.89 E-value=1.7e+02 Score=30.06 Aligned_cols=124 Identities=16% Similarity=0.084 Sum_probs=66.9
Q ss_pred cCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCC-cEEEecc-ccCcCChHHHH
Q 003985 582 DHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDG-QFRWIAA-QTNRARNGELY 659 (781)
Q Consensus 582 ~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~-~V~flG~-~~~~v~~~el~ 659 (781)
+-.|=+..|..|+.-+.+.. .-++++||..+. ....+++.++..|-.. +=+|+|- .+|+. ..
T Consensus 41 dL~kT~~~L~~A~~~i~~i~-~~~ILfVgtk~~-----------~~~~V~~~A~~~g~~~v~~RWlgGtLTN~~----~~ 104 (196)
T TIGR01012 41 DLRKTDERLRVAAKFLVRIE-PEDILVVSARIY-----------GQKPVLKFAKVTGARAIAGRFTPGTFTNPM----QK 104 (196)
T ss_pred cHHHHHHHHHHHHHHHHHhh-CCeEEEEecCHH-----------HHHHHHHHHHHhCCceECCeeCCCCCCCcc----cc
Confidence 33444555666655544433 468999998865 1234555565554321 2278872 22321 11
Q ss_pred HHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCCeEEEECCCC-HHHHHHHHHHHH
Q 003985 660 RYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYH-PDQAAELMADFF 729 (781)
Q Consensus 660 ~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT-~~GG~~EiI~dg~~G~lv~p~d-~e~lA~~I~~~l 729 (781)
. +. -=|+.+...-. .=..++.||...|+|||+- |....+..| -+.++.+| .-.....+..++
T Consensus 105 ~-~~-~Pdlliv~dp~-~~~~Av~EA~~l~IP~Iai~DTn~dp~~v-----dypIP~Ndds~~Si~li~~ll 168 (196)
T TIGR01012 105 A-FR-EPEVVVVTDPR-ADHQALKEASEVGIPIVALCDTDNPLRYV-----DLVIPTNNKGRHSLALIYWLL 168 (196)
T ss_pred c-cC-CCCEEEEECCc-cccHHHHHHHHcCCCEEEEeeCCCCCccC-----CEEECCCCchHHHHHHHHHHH
Confidence 1 12 13444443221 2256899999999999995 666666665 34565543 333444454444
No 239
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=27.84 E-value=6.3e+02 Score=27.05 Aligned_cols=42 Identities=24% Similarity=0.409 Sum_probs=26.2
Q ss_pred HHHHHcC-CCceEEEEcCC-----------CchHHHHHHHHHcCCcEEEEecCC
Q 003985 399 EITAELQ-GFPDFIIGNYS-----------DGNLVASLLAYKMGITQCTIAHAL 440 (781)
Q Consensus 399 ~i~~~l~-~~pDIIh~~~~-----------~~~lva~llar~~gvp~v~t~H~l 440 (781)
.+...+. .+||+|.+--. .+-..|++=+..+|+|-+..-+..
T Consensus 74 al~~l~~~~~pDLVvSGIN~G~Nlg~dv~ySGTVaaA~Ea~~~GipsIA~S~~~ 127 (252)
T COG0496 74 GLNELLKEPRPDLVVSGINAGANLGDDVIYSGTVAAAMEAALLGIPAIAISLAY 127 (252)
T ss_pred HHHHhccCCCCCEEEeCccCCCccccceeeeehHHHHHHHHHcCccceeeeehh
Confidence 3444443 35999994211 134567777788999998876653
No 240
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=27.73 E-value=7.2e+02 Score=25.98 Aligned_cols=33 Identities=12% Similarity=-0.024 Sum_probs=22.7
Q ss_pred CCCceEEEEc--CCCchHHHHHHHHHcCCcEEEEe
Q 003985 405 QGFPDFIIGN--YSDGNLVASLLAYKMGITQCTIA 437 (781)
Q Consensus 405 ~~~pDIIh~~--~~~~~lva~llar~~gvp~v~t~ 437 (781)
.+..|-|+.. ...+..+...+-+..|+|+|..-
T Consensus 177 ~~~~DaiFiSCTnlRt~eii~~lE~~~G~PVvsSN 211 (238)
T COG3473 177 TPDADAIFISCTNLRTFEIIEKLERDTGVPVVSSN 211 (238)
T ss_pred CCCCCeEEEEeeccccHHHHHHHHHHhCCceeecc
Confidence 4577877743 33455666778888999998653
No 241
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=27.48 E-value=6.8e+02 Score=26.87 Aligned_cols=111 Identities=12% Similarity=0.059 Sum_probs=68.3
Q ss_pred EEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCC---CcchHHHHHHHHHHHHHHHcCCCCcEEEeccccC
Q 003985 575 VFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNK---SKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (781)
Q Consensus 575 Il~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~---~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~ 651 (781)
++.++...-..+.+.+++.++++++.. ..++..|... |.- |.+---.+..+.+++.++++|+.=-.....
T Consensus 28 ~~~iaGPCsie~~~~~~~~A~~lk~~g--~~~~r~~~~k-pRTs~~s~~G~g~~gl~~l~~~~~~~Gl~~~te~~d---- 100 (266)
T PRK13398 28 KIIIAGPCAVESEEQMVKVAEKLKELG--VHMLRGGAFK-PRTSPYSFQGLGEEGLKILKEVGDKYNLPVVTEVMD---- 100 (266)
T ss_pred EEEEEeCCcCCCHHHHHHHHHHHHHcC--CCEEEEeeec-CCCCCCccCCcHHHHHHHHHHHHHHcCCCEEEeeCC----
Confidence 455666677788999999999998854 5566666331 111 112112456777888899998752222222
Q ss_pred cCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHH-HcCCcEEEcCc
Q 003985 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAM-TCGLPTFATCH 697 (781)
Q Consensus 652 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAM-a~GlPVIaT~~ 697 (781)
.+-..++.+..|++-.+|. +..-..+++++ ..|+||+.++.
T Consensus 101 ----~~~~~~l~~~vd~~kIga~-~~~n~~LL~~~a~~gkPV~lk~G 142 (266)
T PRK13398 101 ----TRDVEEVADYADMLQIGSR-NMQNFELLKEVGKTKKPILLKRG 142 (266)
T ss_pred ----hhhHHHHHHhCCEEEECcc-cccCHHHHHHHhcCCCcEEEeCC
Confidence 2234444445889999986 33334455444 56999999853
No 242
>PRK12342 hypothetical protein; Provisional
Probab=27.21 E-value=1.9e+02 Score=31.01 Aligned_cols=34 Identities=12% Similarity=0.003 Sum_probs=26.4
Q ss_pred CceEEEEcC----CCchHHHHHHHHHcCCcEEEEecCC
Q 003985 407 FPDFIIGNY----SDGNLVASLLAYKMGITQCTIAHAL 440 (781)
Q Consensus 407 ~pDIIh~~~----~~~~lva~llar~~gvp~v~t~H~l 440 (781)
.||+|.+-. .+.+-++..+|..+|.|++..+..+
T Consensus 109 ~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~~~ 146 (254)
T PRK12342 109 GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSKI 146 (254)
T ss_pred CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEEEE
Confidence 599999533 2347899999999999999877644
No 243
>PLN02534 UDP-glycosyltransferase
Probab=26.93 E-value=7.3e+02 Score=29.18 Aligned_cols=37 Identities=22% Similarity=0.487 Sum_probs=26.9
Q ss_pred eEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEcc
Q 003985 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (781)
Q Consensus 279 ~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~ 340 (781)
..|+++. ||+| |-..-.+ +|++.|+.+|+.|+ +++..
T Consensus 9 ~Hvv~vP---fpaq----------GHi~P~l--------~LAk~La~~G~~vT----~v~t~ 45 (491)
T PLN02534 9 LHFVLIP---LMAQ----------GHMIPMI--------DMARLLAERGVIVS----LVTTP 45 (491)
T ss_pred CEEEEEC---CCCc----------chHHHHH--------HHHHHHHhCCCeEE----EEECC
Confidence 3677774 5544 5666666 77778899999999 87755
No 244
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=26.87 E-value=28 Score=28.69 Aligned_cols=36 Identities=31% Similarity=0.392 Sum_probs=26.1
Q ss_pred CCCCCcchHHHH---HHHHhHhHHHHHHHHHHHHhcCCc
Q 003985 5 KLSRIPSIRERV---EDTLSVHRNELVSLLSRYVAQGKG 40 (781)
Q Consensus 5 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 40 (781)
.+.|+|+|...+ +....-...+|.+||.+.++.||=
T Consensus 13 ~l~RIh~mLkmf~~~~~~~~~s~~eL~~fL~~lv~e~~L 51 (60)
T PF08672_consen 13 PLDRIHSMLKMFPKDPGGYDISLEELQEFLDRLVEEGKL 51 (60)
T ss_dssp EHHHHHHHHHHH-GGG--TT--HHHHHHHHHHHHHTTSE
T ss_pred CHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHCCcE
Confidence 467889988887 333466778999999999998873
No 245
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=26.58 E-value=67 Score=36.33 Aligned_cols=52 Identities=21% Similarity=0.418 Sum_probs=37.6
Q ss_pred cCCCcccHhhhhcCCCCceEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEcc
Q 003985 261 QAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (781)
Q Consensus 261 ~~p~~~~~~~f~~r~p~~~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~ 340 (781)
.+|.+..-..|-++-+..|||+|+...|+. | . .+++.|.++|++|. +++|.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~kVLVtGatG~I-----------G---~-----------~l~~~Ll~~G~~V~----~l~R~ 93 (390)
T PLN02657 43 RATAAAAAQSFRSKEPKDVTVLVVGATGYI-----------G---K-----------FVVRELVRRGYNVV----AVARE 93 (390)
T ss_pred cCCCccccccccccCCCCCEEEEECCCcHH-----------H---H-----------HHHHHHHHCCCEEE----EEEec
Confidence 356666677777777778899988765542 2 1 56677889999998 88776
Q ss_pred C
Q 003985 341 I 341 (781)
Q Consensus 341 ~ 341 (781)
.
T Consensus 94 ~ 94 (390)
T PLN02657 94 K 94 (390)
T ss_pred h
Confidence 3
No 246
>PRK10360 DNA-binding transcriptional activator UhpA; Provisional
Probab=26.29 E-value=5.9e+02 Score=24.46 Aligned_cols=75 Identities=19% Similarity=0.266 Sum_probs=50.9
Q ss_pred HHHHHHHHc-cCcEEEEcCC-CCCCcHHHHHHHHcCCcEEEc-Cccccc---cccccCCeEEEECCCCHHHHHHHHHHHH
Q 003985 656 GELYRYIAD-TKGAFVQPAF-YEAFGLTVVEAMTCGLPTFAT-CHGGPA---EIIEHGASGFHIDPYHPDQAAELMADFF 729 (781)
Q Consensus 656 ~el~~~la~-aadvfV~PS~-~E~fGltvlEAMa~GlPVIaT-~~GG~~---EiI~dg~~G~lv~p~d~e~lA~~I~~~l 729 (781)
.+....+.. ..|++++-.. .+.-|..+++.+....||++. ...... +.+..|..|++..|.+.+++.++|..++
T Consensus 37 ~~~l~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~vi~~s~~~~~~~~~~~~~~ga~~~i~kp~~~~~l~~~i~~~~ 116 (196)
T PRK10360 37 REALAGLPGRGVQVCICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 (196)
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHccCCCEEEEECCCCHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHH
Confidence 344444432 2577777543 345677888888778888875 333222 3455788999999999999999998776
Q ss_pred H
Q 003985 730 G 730 (781)
Q Consensus 730 ~ 730 (781)
.
T Consensus 117 ~ 117 (196)
T PRK10360 117 T 117 (196)
T ss_pred c
Confidence 3
No 247
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=26.12 E-value=9.5e+02 Score=26.83 Aligned_cols=126 Identities=8% Similarity=-0.050 Sum_probs=71.4
Q ss_pred CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHH----HHHHccCcEEEEcC--CC
Q 003985 602 ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELY----RYIADTKGAFVQPA--FY 675 (781)
Q Consensus 602 ~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~----~~la~aadvfV~PS--~~ 675 (781)
.+.+++++|.|.- -+..-+...+.|. .+|.+........+.++++ .+... +|+.+..| ..
T Consensus 173 ~~k~vLvIGaGem------------~~l~a~~L~~~g~-~~i~v~nRt~~~~~~~~~~~~~~~~~~~-~DvVIs~t~~Ta 238 (338)
T PRK00676 173 KKASLLFIGYSEI------------NRKVAYYLQRQGY-SRITFCSRQQLTLPYRTVVREELSFQDP-YDVIFFGSSESA 238 (338)
T ss_pred cCCEEEEEcccHH------------HHHHHHHHHHcCC-CEEEEEcCCccccchhhhhhhhhhcccC-CCEEEEcCCcCC
Confidence 4679999999833 2233333334555 4577777554455566655 56664 89999753 23
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccc--cCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 003985 676 EAFGLTVVEAMTCGLPTFATCHGGPAEIIE--HGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 751 (781)
Q Consensus 676 E~fGltvlEAMa~GlPVIaT~~GG~~EiI~--dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~ 751 (781)
-+.+....|.+..-.+-+.-|..-|+++=. ...+-.++ |.|++.+.+. .+-..|++....+...+.
T Consensus 239 s~~p~i~~~~~~~~~~r~~iDLAvPRdId~v~~~~~v~Ly---~iDdL~~i~~-------~n~~~R~~~~~~ae~iI~ 306 (338)
T PRK00676 239 YAFPHLSWESLADIPDRIVFDFNVPRTFPWSETPFPHRYL---DMDFISEWVQ-------KHLQCRKEVNNKHKLSLR 306 (338)
T ss_pred CCCceeeHHHHhhccCcEEEEecCCCCCccccccCCcEEE---EhHHHHHHHH-------HHHHHHHHHHHHHHHHHH
Confidence 334555555554322246667777777631 12223344 6677666654 344556666666666663
No 248
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=25.95 E-value=4.4e+02 Score=28.14 Aligned_cols=146 Identities=21% Similarity=0.227 Sum_probs=0.0
Q ss_pred chhhhccCccccccccCCCCCCCCCEEEEEee----ccCCCChHHHHHHHHHhhccCC-CeEEEEEeCcCCCCCCcchHH
Q 003985 549 SIEQLLFDPEQNDEHVGTLSDRSKPIVFSMAR----LDHVKNMTGLVECYGKNSQLRE-LVNLVVVAGYIDVNKSKDREE 623 (781)
Q Consensus 549 ~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGR----L~~~Kgl~~LieA~~~l~~~~~-~~~LvIVG~g~~~~~~~d~ee 623 (781)
.++++|...+-.-.+-..-.+.-+++|+..-. ++-.|=+..|-+|+.-+.+... .-.+++||....
T Consensus 5 sm~~lLeAGvHfGhqtr~wnpkm~~fIf~~RngihIIDL~kT~~~l~~A~~~v~~~~~~~g~ILfVgTK~~--------- 75 (252)
T COG0052 5 SMKQLLEAGVHFGHQTRRWNPKMKPFIFGERNGIHIIDLQKTLERLREAYKFLRRIAANGGKILFVGTKKQ--------- 75 (252)
T ss_pred CHHHHHHcCccccccccccCCcccccceeecCCcEEEEHHHHHHHHHHHHHHHHHHHcCCCEEEEEechHH---------
Q ss_pred HHHHHHHHHHHHHcCC-CCcEEEeccccCcCCh-----HHHHHHH-----------------------------------
Q 003985 624 IAEIEKMHELMKTYKL-DGQFRWIAAQTNRARN-----GELYRYI----------------------------------- 662 (781)
Q Consensus 624 ~~~~~~l~~li~el~L-~~~V~flG~~~~~v~~-----~el~~~l----------------------------------- 662 (781)
..+.+.+.+++.|. .=+=||+| +-+.+ ..+-++.
T Consensus 76 --a~~~V~~~A~r~g~~yV~~RwLg---G~LTN~~ti~~si~rl~~lE~~~~~~~~~~tKkE~l~l~re~~kL~k~lgGI 150 (252)
T COG0052 76 --AQEPVKEFAERTGAYYVNGRWLG---GMLTNFKTIRKSIKRLKELEKMEEDGFDGLTKKEALMLTRELEKLEKSLGGI 150 (252)
T ss_pred --HHHHHHHHHHHhCCceecCcccC---ccccCchhHHHHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHHHhhcch
Q ss_pred ------HccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCCeEEEECCCC
Q 003985 663 ------ADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYH 717 (781)
Q Consensus 663 ------a~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT-~~GG~~EiI~dg~~G~lv~p~d 717 (781)
-+ . +||.=...|. .++.||--.|+||||- |+...++.| -+.+|.+|
T Consensus 151 k~m~~~Pd-~-l~ViDp~~e~--iAv~EA~klgIPVvAlvDTn~dpd~V-----D~~IP~Nd 203 (252)
T COG0052 151 KDMKGLPD-V-LFVIDPRKEK--IAVKEANKLGIPVVALVDTNCDPDGV-----DYVIPGND 203 (252)
T ss_pred hhccCCCC-E-EEEeCCcHhH--HHHHHHHHcCCCEEEEecCCCCCccC-----ceeecCCC
No 249
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=25.94 E-value=4.7e+02 Score=30.06 Aligned_cols=103 Identities=10% Similarity=0.029 Sum_probs=65.8
Q ss_pred CCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccC
Q 003985 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (781)
Q Consensus 572 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~ 651 (781)
..+-+..+..++..-..-|++++ ++.+|++++++.-..+. ..+...+.++-.-.+.+++.-
T Consensus 50 p~vWiHaaSVGEv~a~~pLv~~l---~~~~P~~~ilvTt~T~T--------------g~e~a~~~~~~~v~h~YlP~D-- 110 (419)
T COG1519 50 PLVWIHAASVGEVLAALPLVRAL---RERFPDLRILVTTMTPT--------------GAERAAALFGDSVIHQYLPLD-- 110 (419)
T ss_pred CeEEEEecchhHHHHHHHHHHHH---HHhCCCCCEEEEecCcc--------------HHHHHHHHcCCCeEEEecCcC--
Confidence 34567788888877766666655 45678999998887765 223334444433456666531
Q ss_pred cCChHHHHHHHHcc-CcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC
Q 003985 652 RARNGELYRYIADT-KGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (781)
Q Consensus 652 ~v~~~el~~~la~a-advfV~PS~~E~fGltvlEAMa~GlPVIaT~ 696 (781)
-..-+.+++..- -|+.| -...|-+|+++.|+-..|+|++.-|
T Consensus 111 --~~~~v~rFl~~~~P~l~I-i~EtElWPnli~e~~~~~~p~~LvN 153 (419)
T COG1519 111 --LPIAVRRFLRKWRPKLLI-IMETELWPNLINELKRRGIPLVLVN 153 (419)
T ss_pred --chHHHHHHHHhcCCCEEE-EEeccccHHHHHHHHHcCCCEEEEe
Confidence 123444555321 23333 3356889999999999999998765
No 250
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=25.73 E-value=4.3e+02 Score=27.08 Aligned_cols=100 Identities=7% Similarity=0.067 Sum_probs=60.2
Q ss_pred CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc-CCCCcEEEeccccCcCChHHHHHHH
Q 003985 584 VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY-KLDGQFRWIAAQTNRARNGELYRYI 662 (781)
Q Consensus 584 ~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el-~L~~~V~flG~~~~~v~~~el~~~l 662 (781)
..+.+.+.+.+....+ ++.+++++..... + ..++....++..+++ |..- ..+- ..+.++..+.+
T Consensus 14 ~~~~~~l~~~l~~~~~--~~~~i~~IptAs~-----~--~~~~~~~~~~a~~~l~G~~~--~~~~----~~~~~~~~~~l 78 (212)
T cd03146 14 AHALPAIDDLLLSLTK--ARPKVLFVPTASG-----D--RDEYTARFYAAFESLRGVEV--SHLH----LFDTEDPLDAL 78 (212)
T ss_pred ccchHHHHHHHHHhcc--CCCeEEEECCCCC-----C--HHHHHHHHHHHHhhccCcEE--EEEe----ccCcccHHHHH
Confidence 3455666666665542 4578888887754 2 225666777777888 7642 2221 11134556677
Q ss_pred HccCcEEEEcCC--------CCCCcH--HHHHHHHcCCcEEEcCccc
Q 003985 663 ADTKGAFVQPAF--------YEAFGL--TVVEAMTCGLPTFATCHGG 699 (781)
Q Consensus 663 a~aadvfV~PS~--------~E~fGl--tvlEAMa~GlPVIaT~~GG 699 (781)
.. +|++++|-- +...|+ .+-++...|+|++.++.|.
T Consensus 79 ~~-ad~I~l~GG~~~~~~~~l~~~~l~~~l~~~~~~g~~i~G~SAGa 124 (212)
T cd03146 79 LE-ADVIYVGGGNTFNLLAQWREHGLDAILKAALERGVVYIGWSAGS 124 (212)
T ss_pred hc-CCEEEECCchHHHHHHHHHHcCHHHHHHHHHHCCCEEEEECHhH
Confidence 74 999999831 111232 3455667899999997664
No 251
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=25.64 E-value=4e+02 Score=29.88 Aligned_cols=33 Identities=18% Similarity=0.171 Sum_probs=24.0
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEec
Q 003985 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 406 ~~pDIIh~~~~~~~lva~llar~~gvp~v~t~H 438 (781)
|-.-+..+-.+.|+..|++.+.....|+....+
T Consensus 173 G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ 205 (348)
T PF09752_consen 173 GYGPLGLTGISMGGHMAALAASNWPRPVALVPC 205 (348)
T ss_pred CCCceEEEEechhHhhHHhhhhcCCCceeEEEe
Confidence 445677778888888898888877767654443
No 252
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=25.53 E-value=1e+02 Score=35.03 Aligned_cols=80 Identities=8% Similarity=-0.013 Sum_probs=49.6
Q ss_pred HHcCCcEEEcCc---cccccccccCCeEEEECC-CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhh
Q 003985 686 MTCGLPTFATCH---GGPAEIIEHGASGFHIDP-YHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGI 761 (781)
Q Consensus 686 Ma~GlPVIaT~~---GG~~EiI~dg~~G~lv~p-~d~e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~i 761 (781)
|+||-.|+.... .-..+.+...+.-+-|.. +|-.++.++|. .+.++++..++|+++|.+.+.+..+-+ ++
T Consensus 234 L~c~SvVl~~~~~~~e~f~~~L~P~vHYVPV~~~~d~sdL~~~v~----w~~~~~~~A~~IA~~g~~f~~~~L~~~--~~ 307 (395)
T PF05686_consen 234 LACNSVVLKVKSPYYEFFYRALKPWVHYVPVKRDDDLSDLEEKVE----WLNAHDDEAQRIAENGQRFAREYLTME--DV 307 (395)
T ss_pred HcCCceEEEeCCcHHHHHHhhhcccccEEEeccccchhhHHHHhh----hcccChHHHHHHHHHHHHHHHHHhhhh--HH
Confidence 555555554321 112223344555555654 46777777774 345899999999999999998776654 44
Q ss_pred ccchHHHHHh
Q 003985 762 VDPSPFVINV 771 (781)
Q Consensus 762 l~~ye~ll~~ 771 (781)
..-|..++++
T Consensus 308 ~~Y~~~LL~e 317 (395)
T PF05686_consen 308 YCYWRRLLLE 317 (395)
T ss_pred HHHHHHHHHH
Confidence 4555555543
No 253
>CHL00194 ycf39 Ycf39; Provisional
Probab=25.23 E-value=69 Score=34.80 Aligned_cols=33 Identities=12% Similarity=0.418 Sum_probs=25.8
Q ss_pred eEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEcc
Q 003985 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (781)
Q Consensus 279 ~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~ 340 (781)
|||+|+...|+. |+ .++++|.++||+|. +++|.
T Consensus 1 MkIlVtGatG~i-----------G~--------------~lv~~Ll~~g~~V~----~l~R~ 33 (317)
T CHL00194 1 MSLLVIGATGTL-----------GR--------------QIVRQALDEGYQVR----CLVRN 33 (317)
T ss_pred CEEEEECCCcHH-----------HH--------------HHHHHHHHCCCeEE----EEEcC
Confidence 689998877762 32 67778889999998 88876
No 254
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=24.97 E-value=4.9e+02 Score=25.30 Aligned_cols=107 Identities=13% Similarity=0.128 Sum_probs=59.9
Q ss_pred ceEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCC--CCCCCccCcceee
Q 003985 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIP--DAKGTTCNQRLER 355 (781)
Q Consensus 278 ~~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p--~~~~~~~~~~~e~ 355 (781)
..+|++|..+.-|. . .-. ..++.|.+.||+|. =+-+... ...|..+-..+..
T Consensus 16 ~K~IAvVG~S~~P~---------r-----~sy--------~V~kyL~~~GY~Vi----PVNP~~~~~eiLG~k~y~sL~d 69 (140)
T COG1832 16 AKTIAVVGASDKPD---------R-----PSY--------RVAKYLQQKGYRVI----PVNPKLAGEEILGEKVYPSLAD 69 (140)
T ss_pred CceEEEEecCCCCC---------c-----cHH--------HHHHHHHHCCCEEE----eeCcccchHHhcCchhhhcHHh
Confidence 35899998765542 1 122 56778999999987 4433211 2233333334444
Q ss_pred ecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEE
Q 003985 356 VSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQC 434 (781)
Q Consensus 356 v~~~~~~~I~rvP~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~~pDIIh~~~~~~~lva~llar~~gvp~v 434 (781)
++. .+.|+-+ |++. .++..+.+...+. .+.++......-|--|.-.++..|+.+|
T Consensus 70 Ipe--~IDiVdv-FR~~------------------e~~~~i~~eal~~---~~kv~W~QlGi~n~ea~~~~~~aG~~vV 124 (140)
T COG1832 70 IPE--PIDIVDV-FRRS------------------EAAPEVAREALEK---GAKVVWLQLGIRNEEAAEKARDAGLDVV 124 (140)
T ss_pred CCC--CCcEEEE-ecCh------------------hhhHHHHHHHHhh---CCCeEEEecCcCCHHHHHHHHHhCcHHH
Confidence 442 4455444 2221 2233334433332 5888888877667777777777777544
No 255
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=24.61 E-value=72 Score=30.44 Aligned_cols=38 Identities=13% Similarity=0.442 Sum_probs=24.0
Q ss_pred eEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEE
Q 003985 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVT 338 (781)
Q Consensus 279 ~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT 338 (781)
|||++|+ |. |...|.... |.+.+++.+.+.|++++ ++-
T Consensus 1 Mkilii~--gS---------~r~~~~t~~-------l~~~~~~~l~~~g~e~~----~i~ 38 (152)
T PF03358_consen 1 MKILIIN--GS---------PRKNSNTRK-------LAEAVAEQLEEAGAEVE----VID 38 (152)
T ss_dssp -EEEEEE--SS---------SSTTSHHHH-------HHHHHHHHHHHTTEEEE----EEE
T ss_pred CEEEEEE--Cc---------CCCCCHHHH-------HHHHHHHHHHHcCCEEE----EEe
Confidence 7999996 33 333443333 33466777888899998 773
No 256
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=24.45 E-value=47 Score=30.93 Aligned_cols=28 Identities=25% Similarity=0.436 Sum_probs=20.5
Q ss_pred cccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEcc
Q 003985 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (781)
Q Consensus 301 ~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~ 340 (781)
++|-..-.+ .|+++|.++||+|. +.|..
T Consensus 8 t~Ghv~P~l--------ala~~L~~rGh~V~----~~~~~ 35 (139)
T PF03033_consen 8 TRGHVYPFL--------ALARALRRRGHEVR----LATPP 35 (139)
T ss_dssp SHHHHHHHH--------HHHHHHHHTT-EEE----EEETG
T ss_pred ChhHHHHHH--------HHHHHHhccCCeEE----Eeecc
Confidence 456555556 68888999999999 88755
No 257
>TIGR01286 nifK nitrogenase molybdenum-iron protein beta chain. This model represents the majority of known sequences of the nitrogenase molybdenum-iron protein beta subunit. A distinct clade in a phylogenetic tree contains molybdenum-iron, vanadium-iron, and iron-iron forms of nitrogenase beta subunit and is excluded from this model. Nitrogenase, also called dinitrogenase, is responsible for nitrogen fixation. Note: the trusted cutoff score has recently been lowered to include an additional family in which the beta subunit is shorter by about 50 amino acids at the N-terminus. In species with the shorter form of the beta subunit, the alpha subunit has a novel insert of similar length.
Probab=24.36 E-value=1.2e+03 Score=27.66 Aligned_cols=82 Identities=7% Similarity=-0.008 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHcCCCCcE-----------------EEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHH-
Q 003985 626 EIEKMHELMKTYKLDGQF-----------------RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMT- 687 (781)
Q Consensus 626 ~~~~l~~li~el~L~~~V-----------------~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa- 687 (781)
...+++++.+++|+.-++ .+.| ..+.+++...-...+.+.++|.. +....|.|.
T Consensus 235 d~~eikrlL~~~Gi~~~~l~d~s~~~d~p~~g~~~~~~g----gttleei~~a~~A~~~ivl~~~~----~~~~a~~l~~ 306 (515)
T TIGR01286 235 NFREIKRILSLMGVGYTLLSDPEEVLDTPADGEFRMYAG----GTTLEEMKDAPNAEATVLLQPYT----LRKTKEYIEK 306 (515)
T ss_pred hHHHHHHHHHHcCCCeEEccCccccccCCCCCCccccCC----CCCHHHHHHhhhCcEEEEEchhh----hHHHHHHHHH
Confidence 477889999999986543 1222 35567777765533334444422 445666665
Q ss_pred -cCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHH
Q 003985 688 -CGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFF 729 (781)
Q Consensus 688 -~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l 729 (781)
+|.|.+....+ +-....+++..+|.+++
T Consensus 307 ~~g~p~~~~~~P--------------iGi~~Td~fL~~la~~~ 335 (515)
T TIGR01286 307 TWKQETPKLNIP--------------LGVKGTDEFLMKVSEIS 335 (515)
T ss_pred HhCCCcccCCCC--------------ccHHHHHHHHHHHHHHH
Confidence 79997654322 11235566667776665
No 258
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=23.90 E-value=76 Score=34.87 Aligned_cols=19 Identities=21% Similarity=0.363 Sum_probs=15.7
Q ss_pred HHHHHHHHCCCceeeceeEEEcc
Q 003985 318 EMLLRIKRQGLDISPKILIVTRL 340 (781)
Q Consensus 318 eLa~~L~~~GheV~~~v~VlT~~ 340 (781)
.++..|.+.||+|+ ++.+.
T Consensus 16 ~~A~~L~~~G~~V~----~~~r~ 34 (341)
T PRK08229 16 YLGGRLAAAGADVT----LIGRA 34 (341)
T ss_pred HHHHHHHhcCCcEE----EEecH
Confidence 57778899999999 88764
No 259
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=23.59 E-value=2e+02 Score=31.36 Aligned_cols=118 Identities=20% Similarity=0.330 Sum_probs=67.5
Q ss_pred hHHHHHhhcccCCeeeecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCccccCCcH------------
Q 003985 179 PLLDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTA------------ 246 (781)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gwg~~~------------ 246 (781)
.+|.-||... .+.|+-.=-|+.+|+..|..... .. .+ +.+.-.++..||..|=-..|
T Consensus 123 ~~L~~lr~~A----d~vIDTs~l~~~~Lr~~i~~~~~--~~----~~-~~l~v~i~SFGfK~GiP~dAD~VfDvRfLpNP 191 (284)
T PF03668_consen 123 ELLEPLRERA----DLVIDTSNLSVHQLRERIRERFG--GD----KE-SRLTVTIQSFGFKYGIPPDADLVFDVRFLPNP 191 (284)
T ss_pred HHHHHHHHhC----CEEEECCCCCHHHHHHHHHHHhc--cC----CC-CceEEEEEEeccccCCCCCCCEEEEcCcCCCC
Confidence 3445555443 35666666677888887776432 11 11 23444566666644432222
Q ss_pred -----------------------HHHHHHHHHHHHhhcCCCcccHhhhhcCCCCceEEEEEccCcCCcccccCCCCCccc
Q 003985 247 -----------------------EHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGG 303 (781)
Q Consensus 247 -----------------------~~~~~~~~~~~~~~~~p~~~~~~~f~~r~p~~~rI~ivS~hg~~~~~~vlg~p~~GG 303 (781)
.-+.|.+..+.++++. .++.|..+-..-+.|+|=+ |||
T Consensus 192 ~y~~~Lr~lTG~D~~V~~yv~~~~~~~~f~~~~~~~l~~----~lp~y~~egk~~ltIaiGC---------------TGG 252 (284)
T PF03668_consen 192 YYVPELRPLTGLDKPVQDYVLSDPEAQEFLEKIEDLLDF----LLPRYEKEGKSYLTIAIGC---------------TGG 252 (284)
T ss_pred CCChhhhhcCCCChHHHHHHHcChhHHHHHHHHHHHHHH----HHHHHHhcCCceEEEEEEc---------------CCC
Confidence 2233444444444432 3444544444445566554 799
Q ss_pred ceeehHHHHHHHHHHHHHHHHHCCCcee
Q 003985 304 QVVYILDQVRALENEMLLRIKRQGLDIS 331 (781)
Q Consensus 304 ~~vyvld~araL~~eLa~~L~~~GheV~ 331 (781)
+.+.|. +.+.|+++|.+.|+.|.
T Consensus 253 ~HRSV~-----iae~La~~L~~~~~~v~ 275 (284)
T PF03668_consen 253 QHRSVA-----IAERLAERLREKGYTVV 275 (284)
T ss_pred cCcHHH-----HHHHHHHHHHhcCCcce
Confidence 999887 55688999999999887
No 260
>COG1879 RbsB ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]
Probab=23.21 E-value=5.3e+02 Score=27.72 Aligned_cols=78 Identities=17% Similarity=0.138 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHcCCCCcEEEeccccC-cCChHHHHHHHHccCc-EEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccc
Q 003985 625 AEIEKMHELMKTYKLDGQFRWIAAQTN-RARNGELYRYIADTKG-AFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE 702 (781)
Q Consensus 625 ~~~~~l~~li~el~L~~~V~flG~~~~-~v~~~el~~~la~aad-vfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~E 702 (781)
...+.+++.+++++....+.......+ ......+-..+++..| +.|.|.-..++.-.+-+|...|+|||+-+......
T Consensus 50 ~~~~g~~~~a~~~g~~~~~~~~~~~~d~~~Q~~~i~~~ia~~~daIiv~~~d~~~~~~~v~~a~~aGIpVv~~d~~~~~~ 129 (322)
T COG1879 50 AVRKGAEAAAKKLGVVVAVVIADAQNDVAKQIAQIEDLIAQGVDAIIINPVDPDALTPAVKKAKAAGIPVVTVDSDIPGP 129 (322)
T ss_pred HHHHHHHHHHHHcCCcEEEEecccccChHHHHHHHHHHHHcCCCEEEEcCCChhhhHHHHHHHHHCCCcEEEEecCCCCC
Confidence 344456666666664111222211111 1123345555655555 55557778889999999999999999998765543
No 261
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=23.06 E-value=4.7e+02 Score=26.49 Aligned_cols=31 Identities=26% Similarity=0.335 Sum_probs=23.7
Q ss_pred EEEEcCCCchHHHHHHHHHcCCcEEEEecCC
Q 003985 410 FIIGNYSDGNLVASLLAYKMGITQCTIAHAL 440 (781)
Q Consensus 410 IIh~~~~~~~lva~llar~~gvp~v~t~H~l 440 (781)
++..-++.|++.|.+++.+.++|.|.+.=++
T Consensus 61 ~~liGSSlGG~~A~~La~~~~~~avLiNPav 91 (187)
T PF05728_consen 61 VVLIGSSLGGFYATYLAERYGLPAVLINPAV 91 (187)
T ss_pred eEEEEEChHHHHHHHHHHHhCCCEEEEcCCC
Confidence 4444556778899999999999998875444
No 262
>PRK13934 stationary phase survival protein SurE; Provisional
Probab=22.73 E-value=9.8e+02 Score=25.80 Aligned_cols=34 Identities=26% Similarity=0.339 Sum_probs=21.8
Q ss_pred CCCceEEEE--cC----------CCchHHHHHHHHHcCCcEEEEec
Q 003985 405 QGFPDFIIG--NY----------SDGNLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 405 ~~~pDIIh~--~~----------~~~~lva~llar~~gvp~v~t~H 438 (781)
..+||+|++ |. +.+-..|++-+...|+|-+..--
T Consensus 82 ~~~pDLViSGIN~G~NlG~d~v~ySGTVgAA~Ea~~~GIPsIAvS~ 127 (266)
T PRK13934 82 GRKYDLVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPAVAYSA 127 (266)
T ss_pred cCCCCeEEecCccCCCCCcCcccccHhHHHHHHHHhcCCCEEEEec
Confidence 458999994 11 11234566677778999887643
No 263
>PRK05331 putative phosphate acyltransferase; Provisional
Probab=22.28 E-value=1.1e+03 Score=26.35 Aligned_cols=52 Identities=10% Similarity=-0.001 Sum_probs=38.4
Q ss_pred ccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC-CcEEEec
Q 003985 581 LDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD-GQFRWIA 647 (781)
Q Consensus 581 L~~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~-~~V~flG 647 (781)
+.-..+...++++..+..+..+.+.++++|+. +.+++.++++++. +++.++-
T Consensus 9 mGgD~~p~~vl~aa~~a~~~~~~~~~iLvG~~---------------~~I~~~l~~~~~~~~~~~Iv~ 61 (334)
T PRK05331 9 MGGDFGPEVVVPGALQALKEHPDLEIILVGDE---------------EKIKPLLAKKPDLKERIEIVH 61 (334)
T ss_pred CCCccCHHHHHHHHHHHHhcCCCeEEEEEeCH---------------HHHHHHHHhcCCCcCCcEEEe
Confidence 45578889999998887777667999999975 3566667776652 4577765
No 264
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=21.99 E-value=2e+02 Score=30.73 Aligned_cols=61 Identities=13% Similarity=0.040 Sum_probs=40.5
Q ss_pred cCCeEEEECCCCH-HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHhc
Q 003985 706 HGASGFHIDPYHP-DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINVI 772 (781)
Q Consensus 706 dg~~G~lv~p~d~-e~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~v~~~ysw~~~~il~~ye~ll~~~ 772 (781)
..+.-+-+..+.. +++.++|..+. .+++..++|+++|++.+.+..+. .++..-|..++++.
T Consensus 188 P~~HYvPv~~d~sd~~l~~~i~~~~----~~~~~a~~Ia~~~~~~~~~~L~~--~~~~~Y~~~ll~ey 249 (256)
T smart00672 188 PWVHYWPIKSDLSCRELKEAVDWGN----EHDKKAQEIGKRGSEFIQQNLSM--EDVYDYMFHLLQEY 249 (256)
T ss_pred CccceEEeeCCCchhhHHHHHHHHH----hCHHHHHHHHHHHHHHHHHHcCH--HHHHHHHHHHHHHH
Confidence 3444444544222 34778875554 89999999999999999876655 44556666666553
No 265
>PF04844 Ovate: Transcriptional repressor, ovate; InterPro: IPR006458 This group of sequences contain an uncharacterised domain of about 70 residues found exclusively in plants, generally toward the C terminus of proteins of 200 to 350 amino acids in length. At least 14 such proteins are found in Arabidopsis thaliana (Mouse-ear cress). Other regions of these proteins tend to consist largely of low-complexity sequence. Function is not known.
Probab=21.76 E-value=1.3e+02 Score=24.91 Aligned_cols=45 Identities=16% Similarity=0.307 Sum_probs=33.9
Q ss_pred cchHHHHHHHHhHhHHHHHHHHHHHHhcCCcccchhhHHHHHHhhh
Q 003985 10 PSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIF 55 (781)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 (781)
.||.|.+.+---...++|..+|..|.+...+ =.+.-|+.+|.+++
T Consensus 10 ~SM~EMI~~~~i~~~~~LeeLL~cYL~LN~~-~~H~~Iv~aF~dv~ 54 (59)
T PF04844_consen 10 ESMVEMIEENGIRDWDDLEELLACYLSLNSP-EHHKFIVEAFVDVW 54 (59)
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHhCCh-hhhhHHHHHHHHHH
Confidence 4788887777666889999999999887665 12344788888876
No 266
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
Probab=21.74 E-value=1e+03 Score=27.90 Aligned_cols=108 Identities=17% Similarity=0.210 Sum_probs=71.7
Q ss_pred eEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHcc-CcEEEEcCC-CCCCcHH
Q 003985 604 VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADT-KGAFVQPAF-YEAFGLT 681 (781)
Q Consensus 604 ~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~a-advfV~PS~-~E~fGlt 681 (781)
.+++||-+... ....+.......|. .|+... +..+....+... .|+++.=-+ .+.-|+.
T Consensus 5 ~~iLvVDDd~~-----------ir~~l~~~L~~~G~--~v~~a~------~~~~al~~i~~~~~~lvl~Di~mp~~~Gl~ 65 (464)
T COG2204 5 ARILVVDDDPD-----------IRELLEQALELAGY--EVVTAE------SAEEALEALSESPFDLVLLDIRMPGMDGLE 65 (464)
T ss_pred CCEEEEeCCHH-----------HHHHHHHHHHHcCC--eEEEeC------CHHHHHHHHhcCCCCEEEEecCCCCCchHH
Confidence 35677776643 34445555555553 244443 345666777653 355555332 3667899
Q ss_pred HHHHHHc---CCcEEE-cCccccc---cccccCCeEEEECCCCHHHHHHHHHHHHH
Q 003985 682 VVEAMTC---GLPTFA-TCHGGPA---EIIEHGASGFHIDPYHPDQAAELMADFFG 730 (781)
Q Consensus 682 vlEAMa~---GlPVIa-T~~GG~~---EiI~dg~~G~lv~p~d~e~lA~~I~~~l~ 730 (781)
+++.+.. ++|||. |.+|... +-+..|-.-|+..|-|++.+...+.+.++
T Consensus 66 ll~~i~~~~~~~pVI~~Tg~g~i~~AV~A~k~GA~Dfl~KP~~~~~L~~~v~ral~ 121 (464)
T COG2204 66 LLKEIKSRDPDLPVIVMTGHGDIDTAVEALRLGAFDFLEKPFDLDRLLAIVERALE 121 (464)
T ss_pred HHHHHHhhCCCCCEEEEeCCCCHHHHHHHHhcCcceeeeCCCCHHHHHHHHHHHHH
Confidence 8887766 799987 6777744 44557888899999999999999988873
No 267
>TIGR03446 mycothiol_Mca mycothiol conjugate amidase Mca. Mycobacterium tuberculosis, Corynebacterium glutamicum, and related species use the thiol mycothiol in place of glutathione. This enzyme, homologous to the (dispensible) MshB enzyme of mycothiol biosynthesis, is described as an amidase that acts on conjugates to mycothiol. It is a detoxification enzyme.
Probab=21.53 E-value=1.3e+02 Score=32.61 Aligned_cols=22 Identities=18% Similarity=0.013 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHcCCCceEEEEcCC
Q 003985 392 FTEDVGSEITAELQGFPDFIIGNYS 416 (781)
Q Consensus 392 f~~~~~~~i~~~l~~~pDIIh~~~~ 416 (781)
....+.+.|++. +||+|+++..
T Consensus 109 ~~~~L~~iIr~~---~PdvVvT~d~ 130 (283)
T TIGR03446 109 AAEPLVRVIREF---RPHVITTYDE 130 (283)
T ss_pred HHHHHHHHHHHc---CCEEEEecCC
Confidence 344455555543 8999988643
No 268
>cd01972 Nitrogenase_VnfE_like Nitrogenase_VnfE_like: VnfE subunit of the VnfEN complex_like. This group in addition to VnfE contains a subset of the alpha subunit of the nitrogenase MoFe protein and NifE-like proteins. The nitrogenase enzyme system catalyzes the ATP-dependent reduction of dinitrogen to ammonia. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of MoFe protein of the molybdenum(Mo)-nitrogenase. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to NifEN where it is further processed to FeMoco. VnfEN may similarly be a scaffolding protein for the iron-vanadium cofactor (FeVco) of the vanadium-dependent (V)-nitrogenase. NifE and NifN are essential for the Mo-nitrogenase, VnfE and VnfN are not essential for the V-nitrogenase. NifE and NifN can substitute when the vnfEN genes are inactivated.
Probab=20.95 E-value=9.8e+02 Score=27.32 Aligned_cols=100 Identities=13% Similarity=0.151 Sum_probs=59.5
Q ss_pred CCChHHHHHHHHHhh-cc----CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHH
Q 003985 584 VKNMTGLVECYGKNS-QL----RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGEL 658 (781)
Q Consensus 584 ~Kgl~~LieA~~~l~-~~----~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el 658 (781)
..|.+..++++.+.. .. .+.-.+-|+|....+ |+.......+++++.+++|+.-+..|.| ..+.+++
T Consensus 137 ~~G~~~a~~al~~~~~~~~~~~~~~~~VNliG~~~~~----~~~~~~d~~ei~~lL~~~Gi~v~~~~~~----~~~~~ei 208 (426)
T cd01972 137 RSGFDAAFHGILRHLVPPQDPTKQEDSVNIIGLWGGP----ERTEQEDVDEFKRLLNELGLRVNAIIAG----GCSVEEL 208 (426)
T ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCCEEEEccCCCc----cccccccHHHHHHHHHHcCCeEEEEeCC----CCCHHHH
Confidence 467777777665422 11 111134455665331 1112234678999999999988778877 3456777
Q ss_pred HHHHHccCcEEEEcCCCCCCcHHHHHHH--HcCCcEEEc
Q 003985 659 YRYIADTKGAFVQPAFYEAFGLTVVEAM--TCGLPTFAT 695 (781)
Q Consensus 659 ~~~la~aadvfV~PS~~E~fGltvlEAM--a~GlPVIaT 695 (781)
.+.-. |.+-|..+. .+|..+.+.| -+|+|.+..
T Consensus 209 ~~~~~--A~lniv~~~--~~g~~~a~~Lee~~GiP~~~~ 243 (426)
T cd01972 209 ERASE--AAANVTLCL--DLGYYLGAALEQRFGVPEIKA 243 (426)
T ss_pred Hhccc--CCEEEEECh--hHHHHHHHHHHHHhCCCeEec
Confidence 76433 444443322 2567888888 589998864
No 269
>PRK05380 pyrG CTP synthetase; Validated
Probab=20.81 E-value=5.5e+02 Score=30.57 Aligned_cols=99 Identities=14% Similarity=0.259 Sum_probs=57.3
Q ss_pred HHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcC
Q 003985 594 YGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 673 (781)
Q Consensus 594 ~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS 673 (781)
..++......+++-+||....-.+ .+....+.|+....+.+..=.+.|+.... +..+.....+.. .|.+|+|-
T Consensus 279 ~~~~~~~~~~v~IalVGKY~~l~D----aY~Sv~eAL~hag~~~~~~v~i~wIdse~--l~~~~~~~~L~~-~DGIIlpG 351 (533)
T PRK05380 279 VERLKNPKGEVTIALVGKYVELPD----AYKSVIEALKHAGIANDVKVNIKWIDSED--LEEENVAELLKG-VDGILVPG 351 (533)
T ss_pred HHHHhCCCCceEEEEEeCccCCcH----HHHHHHHHHHHHHHHcCCeeEEEEEChhh--ccCcchhhHhhc-CCEEEecC
Confidence 333333334699999999765222 23344555555555555555677876211 122123456775 88888875
Q ss_pred CC-----CCCcHHHHHHHHcCCcEEEcCccc
Q 003985 674 FY-----EAFGLTVVEAMTCGLPTFATCHGG 699 (781)
Q Consensus 674 ~~-----E~fGltvlEAMa~GlPVIaT~~GG 699 (781)
-+ ++.-..+-+|...|+|+++.|.|-
T Consensus 352 GfG~~~~~g~i~~i~~a~e~~iPiLGIClGm 382 (533)
T PRK05380 352 GFGERGIEGKILAIRYARENNIPFLGICLGM 382 (533)
T ss_pred CCCccccccHHHHHHHHHHCCCcEEEEchHH
Confidence 22 222224566778899999998664
No 270
>TIGR01278 DPOR_BchB light-independent protochlorophyllide reductase, B subunit. This enzyme describes the B subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme. This subunit shows homology to the nitrogenase molybdenum-iron protein. It catalyzes a step in bacteriochlorophyll biosynthesis.
Probab=20.68 E-value=1.4e+03 Score=26.84 Aligned_cols=62 Identities=21% Similarity=0.219 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHH--HcCCcEEEc
Q 003985 626 EIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAM--TCGLPTFAT 695 (781)
Q Consensus 626 ~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAM--a~GlPVIaT 695 (781)
...+++++.+++|+.-++.|.+ ..+.+++.+. . .|++-|.++.. +|....++| -+|+|.+.+
T Consensus 176 D~~elkrlL~~lGi~vn~v~p~----g~s~~dl~~l-~-~A~~NIv~~~~--~g~~~A~~Le~~fGiP~i~~ 239 (511)
T TIGR01278 176 DLIELRRLLKTLGIEVNVVAPW----GASIADLARL-P-AAWLNICPYRE--IGLMAAEYLKEKFGQPYITT 239 (511)
T ss_pred HHHHHHHHHHHCCCeEEEEeCC----CCCHHHHHhc-c-cCcEEEEechH--HHHHHHHHHHHHhCCCcccc
Confidence 3678999999999998888876 3456777764 4 36677766442 567777777 679998743
No 271
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=20.57 E-value=1.1e+03 Score=25.74 Aligned_cols=138 Identities=11% Similarity=0.098 Sum_probs=79.5
Q ss_pred CCCCEEEEEeeccCCCChHHHHHHH----HHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003985 570 RSKPIVFSMARLDHVKNMTGLVECY----GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (781)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgl~~LieA~----~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~f 645 (781)
....+|.+.|-+....- ..+.++. .++..+....-.|+|||........+.......+.+.+++++.+ ..+..
T Consensus 111 ~~~Nvl~t~ga~~~i~~-~~l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~--~~~~v 187 (311)
T PF06258_consen 111 RGPNVLPTLGAPNRITP-ERLAEAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG--GSLLV 187 (311)
T ss_pred CCCceEecccCCCcCCH-HHHHHHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC--CeEEE
Confidence 34557778888776543 3333333 23333333466788888655333333333455577888888876 34555
Q ss_pred eccccCcCChHHHHHHHHccC----cEEEEcCCCCCCcHHHHHHHHcCCcEEEcC--ccccccccccCCeEEEECCC
Q 003985 646 IAAQTNRARNGELYRYIADTK----GAFVQPAFYEAFGLTVVEAMTCGLPTFATC--HGGPAEIIEHGASGFHIDPY 716 (781)
Q Consensus 646 lG~~~~~v~~~el~~~la~aa----dvfV~PS~~E~fGltvlEAMa~GlPVIaT~--~GG~~EiI~dg~~G~lv~p~ 716 (781)
+.. +-...++...+.+.. .+.+. ..++ ...+.+.|++.--+++|. +.-..|-+..|.--++++..
T Consensus 188 ttS---RRTp~~~~~~L~~~~~~~~~~~~~--~~~~-~nPy~~~La~ad~i~VT~DSvSMvsEA~~tG~pV~v~~l~ 258 (311)
T PF06258_consen 188 TTS---RRTPPEAEAALRELLKDNPGVYIW--DGTG-ENPYLGFLAAADAIVVTEDSVSMVSEAAATGKPVYVLPLP 258 (311)
T ss_pred EcC---CCCcHHHHHHHHHhhcCCCceEEe--cCCC-CCcHHHHHHhCCEEEEcCccHHHHHHHHHcCCCEEEecCC
Confidence 542 222334444444322 24344 2333 446889999999999984 44577877777766666543
No 272
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=20.51 E-value=9e+02 Score=25.37 Aligned_cols=98 Identities=12% Similarity=0.016 Sum_probs=49.6
Q ss_pred CCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc---EEEec-cccCcCChHHH
Q 003985 583 HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ---FRWIA-AQTNRARNGEL 658 (781)
Q Consensus 583 ~~Kgl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~---V~flG-~~~~~v~~~el 658 (781)
...|+..+++.+++ . .+++.|+-+++. ..+....+.+++.+. ..+.+ ......|..++
T Consensus 102 ~~pg~~elL~~L~~---~--g~~l~I~T~~~~-------------~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~ 163 (267)
T PRK13478 102 PIPGVLEVIAALRA---R--GIKIGSTTGYTR-------------EMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWM 163 (267)
T ss_pred CCCCHHHHHHHHHH---C--CCEEEEEcCCcH-------------HHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHH
Confidence 35566666665543 2 477777766543 223333444333221 22222 11123355666
Q ss_pred HHHHHccCcEEEE-cCC---CCCCcHHHHHHHHcCCcEEEcCcccc
Q 003985 659 YRYIADTKGAFVQ-PAF---YEAFGLTVVEAMTCGLPTFATCHGGP 700 (781)
Q Consensus 659 ~~~la~aadvfV~-PS~---~E~fGltvlEAMa~GlPVIaT~~GG~ 700 (781)
+....... -+. |+. .+--..=+.=|-++|+++|+-..|+.
T Consensus 164 ~~~a~~~l--~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~ 207 (267)
T PRK13478 164 ALKNAIEL--GVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGN 207 (267)
T ss_pred HHHHHHHc--CCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcc
Confidence 65544322 232 221 23334446667799999999876654
No 273
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=20.50 E-value=9e+02 Score=24.49 Aligned_cols=88 Identities=6% Similarity=0.026 Sum_probs=55.5
Q ss_pred CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcC--------
Q 003985 602 ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA-------- 673 (781)
Q Consensus 602 ~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS-------- 673 (781)
...+++++.....+ ..++.+.+.+..+++|........-. ....+++.+.+.. +|+++++-
T Consensus 28 ~~~~i~~iptA~~~-------~~~~~~~~~~~~~~lG~~~~~~~~~~---~~~~~~~~~~l~~-ad~I~~~GG~~~~~~~ 96 (210)
T cd03129 28 AGARVLFIPTASGD-------RDEYGEEYRAAFERLGVEVVHLLLID---TANDPDVVARLLE-ADGIFVGGGNQLRLLS 96 (210)
T ss_pred CCCeEEEEeCCCCC-------hHHHHHHHHHHHHHcCCceEEEeccC---CCCCHHHHHHHhh-CCEEEEcCCcHHHHHH
Confidence 35678888766541 22445677777888887542222211 1345788888985 88888862
Q ss_pred CCCC--CcHHHHHHHHcCCcEEEcCcccc
Q 003985 674 FYEA--FGLTVVEAMTCGLPTFATCHGGP 700 (781)
Q Consensus 674 ~~E~--fGltvlEAMa~GlPVIaT~~GG~ 700 (781)
.+.. .--.+.+....|+|++.+..|..
T Consensus 97 ~l~~t~~~~~i~~~~~~G~v~~G~SAGA~ 125 (210)
T cd03129 97 VLRETPLLDAILKRVARGVVIGGTSAGAA 125 (210)
T ss_pred HHHhCChHHHHHHHHHcCCeEEEcCHHHH
Confidence 1222 22357888889999999876653
No 274
>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B ....
Probab=20.49 E-value=1.9e+02 Score=31.73 Aligned_cols=67 Identities=15% Similarity=0.269 Sum_probs=39.0
Q ss_pred eEEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeeceeEEEccCCCCC----CCccCccee
Q 003985 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAK----GTTCNQRLE 354 (781)
Q Consensus 279 ~rI~ivS~hg~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VlT~~~p~~~----~~~~~~~~e 354 (781)
|||++++ | .||+.....-- .+|-+++++|+.|- +++....+.. +........
T Consensus 1 ~r~~~~~--G------------KGGVGKTT~aa------A~A~~~A~~G~rtL----lvS~Dpa~~L~d~l~~~~~~~~~ 56 (305)
T PF02374_consen 1 MRILFFG--G------------KGGVGKTTVAA------ALALALARRGKRTL----LVSTDPAHSLSDVLGQKLGGEPT 56 (305)
T ss_dssp -SEEEEE--E------------STTSSHHHHHH------HHHHHHHHTTS-EE----EEESSTTTHHHHHHTS--BSS-E
T ss_pred CeEEEEe--c------------CCCCCcHHHHH------HHHHHHhhCCCCee----EeecCCCccHHHHhCCcCCCCCe
Confidence 6888887 2 36777776633 35557889999987 8876644322 333334455
Q ss_pred eecCCCCeEEEEecc
Q 003985 355 RVSGTEHTHILRVPF 369 (781)
Q Consensus 355 ~v~~~~~~~I~rvP~ 369 (781)
.+.+.+|.....+-.
T Consensus 57 ~v~~~~~L~a~eid~ 71 (305)
T PF02374_consen 57 KVEGVPNLSAMEIDP 71 (305)
T ss_dssp EETTCSSEEEEE--H
T ss_pred EecCCCCceeeecCH
Confidence 677667887777633
No 275
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=20.42 E-value=3.7e+02 Score=28.56 Aligned_cols=87 Identities=16% Similarity=0.169 Sum_probs=55.7
Q ss_pred HHHHHccCcEEEEcC-CCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHH
Q 003985 659 YRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPS 737 (781)
Q Consensus 659 ~~~la~aadvfV~PS-~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l~~l~~dp~ 737 (781)
..-+++ ||++|.-- -+|+|=-.+++.+ .+.+++....++..+- ....-.+..+|.+...+++.|.+.| +..||+
T Consensus 47 ~~~l~~-ADliv~~G~~lE~~~~k~~~~~-~~~~v~~~~~~~~~~~-~~~dPH~Wldp~n~~~~a~~I~~~L--~~~dP~ 121 (264)
T cd01020 47 AAKVST-ADIVVYNGGGYDPWMTKLLADT-KDVIVIAADLDGHDDK-EGDNPHLWYDPETMSKVANALADAL--VKADPD 121 (264)
T ss_pred HHHHhh-CCEEEEeCCCchHHHHHHHHhc-CCceEEeeecccccCC-CCCCCceecCHhHHHHHHHHHHHHH--HHhCcc
Confidence 444554 78777754 3566655666655 4566666544432110 1124567889999999999999988 346787
Q ss_pred HHHHHHHHHHHHH
Q 003985 738 HWKKISDGGLKRI 750 (781)
Q Consensus 738 ~~~~~s~~a~~~v 750 (781)
..+...+++.+..
T Consensus 122 ~~~~y~~N~~~~~ 134 (264)
T cd01020 122 NKKYYQANAKKFV 134 (264)
T ss_pred cHHHHHHHHHHHH
Confidence 7777777776655
No 276
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=20.35 E-value=1.3e+03 Score=26.38 Aligned_cols=47 Identities=13% Similarity=0.020 Sum_probs=32.6
Q ss_pred hHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccccc
Q 003985 655 NGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEII 704 (781)
Q Consensus 655 ~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVIaT~~GG~~EiI 704 (781)
.+++...+.+ +|++|..+-...+=++ ..|..+.|.+.-|.+-|+++=
T Consensus 233 ~~~l~~~l~~-aDiVI~aT~a~~~vi~--~~~~~~~~~~~iDLavPRdid 279 (414)
T PRK13940 233 LSELPQLIKK-ADIIIAAVNVLEYIVT--CKYVGDKPRVFIDISIPQALD 279 (414)
T ss_pred HHHHHHHhcc-CCEEEECcCCCCeeEC--HHHhCCCCeEEEEeCCCCCCC
Confidence 4677888886 9999987643332122 344568899999998888864
No 277
>cd01967 Nitrogenase_MoFe_alpha_like Nitrogenase_MoFe_alpha_like: Nitrogenase MoFe protein, alpha subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. Three genetically distinct types of nitrogenase systems are known to exist: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). This group contains the alpha subunit of component 1 of all three different forms. The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. The role of the delta subunit is unknown. For MoFe, each alphabeta pair of subunits contains one
Probab=20.26 E-value=1.2e+03 Score=26.04 Aligned_cols=115 Identities=10% Similarity=0.048 Sum_probs=66.1
Q ss_pred CCCChHHHHHHHHHhh-cc-----CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChH
Q 003985 583 HVKNMTGLVECYGKNS-QL-----RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNG 656 (781)
Q Consensus 583 ~~Kgl~~LieA~~~l~-~~-----~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~~ 656 (781)
...|.+..++++.+.. .. .+.-.+-|+|....+ ....+++++.++.|+.-+..|.| ..+.+
T Consensus 134 ~~~G~~~a~~al~~~l~~~~~~~~~~~~~VNiig~~~~~---------~d~~el~~lL~~~Gi~~~~~~~~----~~~~~ 200 (406)
T cd01967 134 QSLGHHIANDAILDHLVGTKEPEEKTPYDVNIIGEYNIG---------GDAWVIKPLLEELGIRVNATFTG----DGTVD 200 (406)
T ss_pred ccHHHHHHHHHHHHHhcCCCCcCCCCCCeEEEEeccccc---------hhHHHHHHHHHHcCCEEEEEeCC----CCCHH
Confidence 3556776776655432 11 123346667764321 23678899999999988777876 44567
Q ss_pred HHHHHHHccCcEEEEcCCCCCCcHHHHHHHH--cCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHH
Q 003985 657 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMT--CGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFF 729 (781)
Q Consensus 657 el~~~la~aadvfV~PS~~E~fGltvlEAMa--~GlPVIaT~~GG~~EiI~dg~~G~lv~p~d~e~lA~~I~~~l 729 (781)
++.+ +.+ |.+-|..+. .+|....+.|. .|+|.+.... +...+.+++-+.|.+++
T Consensus 201 ~i~~-~~~-A~~niv~~~--~~~~~~a~~L~~r~GiP~~~~~p---------------~G~~~t~~~l~~l~~~l 256 (406)
T cd01967 201 ELRR-AHR-AKLNLVHCS--RSMNYLAREMEERYGIPYMEVNF---------------YGFEDTSESLRKIAKFF 256 (406)
T ss_pred HHhh-Ccc-CCEEEEECh--HHHHHHHHHHHHhhCCCEEEecC---------------CcHHHHHHHHHHHHHHh
Confidence 7776 332 444443322 23555555553 7899875221 12235566666666665
No 278
>PLN02327 CTP synthase
Probab=20.04 E-value=9.8e+02 Score=28.64 Aligned_cols=107 Identities=14% Similarity=0.238 Sum_probs=63.6
Q ss_pred ChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCCh----------
Q 003985 586 NMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARN---------- 655 (781)
Q Consensus 586 gl~~LieA~~~l~~~~~~~~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el~L~~~V~flG~~~~~v~~---------- 655 (781)
++..--+...++.+....+++-+||....-.+ .+....+.|......++..=.+.|+.... +..
T Consensus 280 ~~~~W~~~~~~~~~~~~~v~IalVGKY~~l~D----AY~Si~eAL~hA~~~~~~~v~i~wI~se~--l~~~~~~~~~~~y 353 (557)
T PLN02327 280 DLEEWTARAESCDNLTEPVRIAMVGKYTGLSD----SYLSVLKALLHASVACSRKLVIDWVAASD--LEDETAKETPDAY 353 (557)
T ss_pred ChHHHHHHHHHHhCCCCceEEEEEecccCCcH----hHHHHHHHHHHHHHHcCCeeEEEEEchhh--cCCcccccccchh
Confidence 34433334444443334699999998754211 24455566666667777777788886422 111
Q ss_pred HHHHHHHHccCcEEEEcCCC-----CCCcHHHHHHHHcCCcEEEcCccc
Q 003985 656 GELYRYIADTKGAFVQPAFY-----EAFGLTVVEAMTCGLPTFATCHGG 699 (781)
Q Consensus 656 ~el~~~la~aadvfV~PS~~-----E~fGltvlEAMa~GlPVIaT~~GG 699 (781)
..+...+.+ +|.+|.|.-+ |+.-..+-.|...|+|++..|.|-
T Consensus 354 ~~~~~~L~~-~DGIvvpGGfG~~~~~G~i~ai~~are~~iP~LGIClGm 401 (557)
T PLN02327 354 AAAWKLLKG-ADGILVPGGFGDRGVEGKILAAKYARENKVPYLGICLGM 401 (557)
T ss_pred hhhHHhhcc-CCEEEeCCCCCCcccccHHHHHHHHHHcCCCEEEEcHHH
Confidence 113455675 8888888632 222233455667899999998773
Done!