Query 003987
Match_columns 781
No_of_seqs 388 out of 3225
Neff 6.9
Searched_HMMs 46136
Date Thu Mar 28 15:32:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003987.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003987hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00142 sucrose synthase 100.0 6E-188 1E-192 1633.5 67.5 767 1-769 2-768 (815)
2 TIGR02470 sucr_synth sucrose s 100.0 4E-181 8E-186 1577.3 69.8 744 24-769 1-745 (784)
3 PF00862 Sucrose_synth: Sucros 100.0 1E-174 2E-179 1416.4 29.5 550 7-556 1-550 (550)
4 TIGR02468 sucrsPsyn_pln sucros 100.0 2.7E-57 5.8E-62 541.1 39.7 455 278-772 169-671 (1050)
5 KOG0853 Glycosyltransferase [C 100.0 2.1E-55 4.6E-60 488.0 23.5 452 195-758 1-456 (495)
6 TIGR02472 sucr_P_syn_N sucrose 100.0 5.7E-51 1.2E-55 463.3 40.3 425 279-769 1-438 (439)
7 TIGR03449 mycothiol_MshA UDP-N 100.0 2.8E-42 6E-47 386.3 38.0 399 281-771 1-401 (405)
8 PRK00654 glgA glycogen synthas 100.0 1.1E-42 2.4E-47 398.3 34.5 425 279-770 1-461 (466)
9 cd03800 GT1_Sucrose_synthase T 100.0 9.4E-41 2E-45 369.9 40.5 392 280-759 1-392 (398)
10 TIGR02095 glgA glycogen/starch 100.0 1.3E-40 2.8E-45 381.8 38.5 435 279-771 1-472 (473)
11 PLN02939 transferase, transfer 100.0 3.2E-40 6.9E-45 389.5 41.7 458 256-769 455-968 (977)
12 PRK10307 putative glycosyl tra 100.0 1.3E-40 2.9E-45 374.4 36.4 396 279-771 1-407 (412)
13 cd03796 GT1_PIG-A_like This fa 100.0 1.7E-40 3.6E-45 372.3 33.9 366 280-770 1-370 (398)
14 PLN02316 synthase/transferase 100.0 1.4E-39 3E-44 390.5 41.1 405 278-770 587-1032(1036)
15 PRK14098 glycogen synthase; Pr 100.0 1.5E-39 3.3E-44 373.7 35.6 439 276-772 4-486 (489)
16 TIGR02149 glgA_Coryne glycogen 100.0 8.7E-39 1.9E-43 354.9 35.6 376 279-769 1-384 (388)
17 cd03791 GT1_Glycogen_synthase_ 100.0 9.3E-39 2E-43 366.1 36.3 433 280-769 1-474 (476)
18 PLN02871 UDP-sulfoquinovose:DA 100.0 6.8E-39 1.5E-43 366.9 35.0 376 277-772 57-439 (465)
19 PRK15427 colanic acid biosynth 100.0 2.1E-38 4.5E-43 356.9 37.2 280 405-770 116-404 (406)
20 cd04962 GT1_like_5 This family 100.0 3.9E-38 8.4E-43 346.5 38.2 365 279-770 1-369 (371)
21 PRK14099 glycogen synthase; Pr 100.0 2E-38 4.4E-43 364.0 37.3 429 278-769 3-480 (485)
22 PRK15484 lipopolysaccharide 1, 100.0 3E-37 6.6E-42 344.5 36.3 375 277-772 1-378 (380)
23 cd03805 GT1_ALG2_like This fam 100.0 3.9E-37 8.4E-42 342.1 35.8 382 279-759 1-388 (392)
24 cd03818 GT1_ExpC_like This fam 100.0 8.9E-37 1.9E-41 341.8 37.3 359 318-759 15-390 (396)
25 TIGR03088 stp2 sugar transfera 100.0 9.6E-37 2.1E-41 337.7 33.6 364 280-770 3-371 (374)
26 cd03819 GT1_WavL_like This fam 100.0 4.9E-36 1.1E-40 327.1 33.4 347 300-759 8-355 (355)
27 PRK15179 Vi polysaccharide bio 100.0 7.1E-36 1.5E-40 351.9 36.4 457 203-769 204-691 (694)
28 cd05844 GT1_like_7 Glycosyltra 100.0 4.5E-36 9.7E-41 329.6 32.5 274 406-759 81-360 (367)
29 cd04955 GT1_like_6 This family 100.0 2.6E-35 5.6E-40 321.9 37.0 360 280-769 1-362 (363)
30 PRK15490 Vi polysaccharide bio 100.0 5.3E-36 1.1E-40 339.3 29.7 397 300-771 172-575 (578)
31 KOG1111 N-acetylglucosaminyltr 100.0 1.5E-36 3.3E-41 318.7 22.0 365 279-772 1-367 (426)
32 cd03792 GT1_Trehalose_phosphor 100.0 3.9E-35 8.5E-40 325.5 33.7 286 405-770 83-370 (372)
33 cd03821 GT1_Bme6_like This fam 100.0 2.1E-34 4.6E-39 311.5 36.3 366 280-759 1-369 (375)
34 cd03795 GT1_like_4 This family 100.0 6.9E-34 1.5E-38 309.6 36.6 353 280-759 1-356 (357)
35 cd03799 GT1_amsK_like This is 100.0 1E-33 2.2E-38 308.1 36.9 268 405-759 77-351 (355)
36 cd03812 GT1_CapH_like This fam 100.0 3.1E-34 6.7E-39 313.3 31.9 349 280-754 1-350 (358)
37 cd03794 GT1_wbuB_like This fam 100.0 2.2E-33 4.7E-38 304.6 36.8 382 280-759 1-389 (394)
38 cd03817 GT1_UGDG_like This fam 100.0 3.3E-33 7.2E-38 302.5 35.9 360 280-754 1-362 (374)
39 cd03802 GT1_AviGT4_like This f 100.0 3.1E-33 6.6E-38 302.6 35.4 332 279-769 1-334 (335)
40 cd03814 GT1_like_2 This family 100.0 3.3E-33 7.2E-38 302.9 34.9 362 280-769 1-363 (364)
41 cd03816 GT1_ALG1_like This fam 100.0 2.6E-33 5.6E-38 316.5 34.6 386 277-758 2-405 (415)
42 cd03801 GT1_YqgM_like This fam 100.0 8.4E-33 1.8E-37 296.1 36.8 373 280-769 1-373 (374)
43 cd04951 GT1_WbdM_like This fam 100.0 6.2E-33 1.3E-37 302.5 35.7 358 280-770 1-359 (360)
44 cd03822 GT1_ecORF704_like This 100.0 1E-32 2.2E-37 299.8 37.1 357 280-769 1-365 (366)
45 PRK09922 UDP-D-galactose:(gluc 100.0 8.9E-34 1.9E-38 313.7 29.1 347 279-768 1-356 (359)
46 cd03813 GT1_like_3 This family 100.0 4.8E-34 1E-38 327.8 27.1 291 406-769 172-474 (475)
47 cd03807 GT1_WbnK_like This fam 100.0 4.4E-33 9.5E-38 300.0 31.6 362 280-769 1-364 (365)
48 PLN02846 digalactosyldiacylgly 100.0 7.9E-33 1.7E-37 312.2 33.4 369 277-770 3-390 (462)
49 cd03806 GT1_ALG11_like This fa 100.0 4.7E-33 1E-37 314.7 30.7 371 281-759 3-416 (419)
50 cd03820 GT1_amsD_like This fam 100.0 3.5E-32 7.5E-37 290.6 33.8 345 280-766 1-347 (348)
51 cd03825 GT1_wcfI_like This fam 100.0 1.5E-32 3.2E-37 300.1 31.5 342 279-770 1-363 (365)
52 PLN02949 transferase, transfer 100.0 2.4E-32 5.2E-37 311.4 32.6 398 273-770 28-459 (463)
53 cd03811 GT1_WabH_like This fam 100.0 7.5E-32 1.6E-36 288.0 32.9 351 280-755 1-352 (353)
54 cd03823 GT1_ExpE7_like This fa 100.0 8.5E-32 1.8E-36 290.8 33.6 353 280-770 1-358 (359)
55 cd03808 GT1_cap1E_like This fa 100.0 1.2E-31 2.5E-36 287.8 34.3 351 280-759 1-353 (359)
56 cd03809 GT1_mtfB_like This fam 100.0 3.2E-32 7E-37 295.7 29.2 359 280-759 1-359 (365)
57 cd03798 GT1_wlbH_like This fam 100.0 4.7E-31 1E-35 284.0 36.3 362 301-770 13-375 (377)
58 PRK10125 putative glycosyl tra 100.0 6.4E-32 1.4E-36 304.0 30.2 278 405-771 92-404 (405)
59 TIGR03087 stp1 sugar transfera 100.0 4.3E-32 9.3E-37 304.2 26.3 284 405-769 102-394 (397)
60 TIGR02918 accessory Sec system 100.0 2.3E-31 5E-36 306.1 29.3 280 405-771 209-499 (500)
61 cd04946 GT1_AmsK_like This fam 100.0 1.9E-30 4E-35 292.5 30.0 271 405-759 125-401 (407)
62 PLN02275 transferase, transfer 100.0 1E-29 2.3E-34 282.9 31.2 318 318-728 23-370 (371)
63 cd04949 GT1_gtfA_like This fam 100.0 8.8E-29 1.9E-33 273.7 29.2 269 406-759 98-368 (372)
64 cd03804 GT1_wbaZ_like This fam 100.0 3.2E-29 6.9E-34 275.2 23.7 260 405-759 81-346 (351)
65 PLN02501 digalactosyldiacylgly 100.0 8.4E-28 1.8E-32 274.9 32.9 270 395-759 425-699 (794)
66 COG0297 GlgA Glycogen synthase 100.0 6.3E-28 1.4E-32 272.7 29.1 436 279-769 1-479 (487)
67 PHA01630 putative group 1 glyc 100.0 1.2E-27 2.5E-32 262.4 25.1 256 413-770 52-329 (331)
68 cd03793 GT1_Glycogen_synthase_ 100.0 2.1E-26 4.7E-31 261.4 29.2 319 405-759 146-576 (590)
69 PRK00726 murG undecaprenyldiph 99.9 2.3E-25 5E-30 245.9 30.4 342 279-769 2-355 (357)
70 cd03785 GT1_MurG MurG is an N- 99.9 2.5E-24 5.5E-29 236.1 31.4 313 301-750 9-339 (350)
71 cd03788 GT1_TPS Trehalose-6-Ph 99.9 3.2E-25 6.9E-30 253.6 24.9 315 396-758 121-450 (460)
72 PHA01633 putative glycosyl tra 99.9 1.2E-24 2.6E-29 237.3 26.1 224 471-766 89-334 (335)
73 TIGR01133 murG undecaprenyldip 99.9 3.1E-24 6.8E-29 235.2 29.0 305 318-750 19-336 (348)
74 TIGR02400 trehalose_OtsA alpha 99.9 4E-24 8.7E-29 243.5 27.0 319 395-767 116-452 (456)
75 PRK05749 3-deoxy-D-manno-octul 99.9 2.3E-23 5E-28 235.9 27.7 272 407-753 124-406 (425)
76 PF00534 Glycos_transf_1: Glyc 99.9 1.9E-23 4E-28 206.1 15.0 160 569-749 12-172 (172)
77 PLN03063 alpha,alpha-trehalose 99.9 5.4E-22 1.2E-26 239.1 25.1 321 395-769 136-475 (797)
78 PRK13609 diacylglycerol glucos 99.9 1.8E-21 3.9E-26 217.0 24.9 261 406-769 103-369 (380)
79 cd04950 GT1_like_1 Glycosyltra 99.9 3.7E-20 7.9E-25 206.4 31.5 264 405-768 100-368 (373)
80 cd01635 Glycosyltransferase_GT 99.9 2.1E-20 4.6E-25 189.1 25.3 121 577-713 109-229 (229)
81 PRK14501 putative bifunctional 99.9 8.9E-21 1.9E-25 228.3 24.1 321 395-771 122-462 (726)
82 PLN02605 monogalactosyldiacylg 99.9 6.2E-20 1.3E-24 205.3 25.9 247 406-750 99-363 (382)
83 PRK13608 diacylglycerol glucos 99.8 6.2E-19 1.3E-23 198.0 23.7 276 395-776 95-376 (391)
84 COG0438 RfaG Glycosyltransfera 99.8 2.6E-18 5.6E-23 181.2 26.4 289 408-770 84-375 (381)
85 TIGR02398 gluc_glyc_Psyn gluco 99.8 1E-17 2.2E-22 190.8 28.8 304 407-756 132-469 (487)
86 TIGR02094 more_P_ylases alpha- 99.8 1.2E-17 2.5E-22 195.3 27.2 348 393-768 148-597 (601)
87 PRK09814 beta-1,6-galactofuran 99.8 2.7E-17 5.8E-22 180.8 25.0 234 407-750 63-313 (333)
88 PRK00025 lpxB lipid-A-disaccha 99.8 3.5E-17 7.6E-22 182.2 24.7 249 406-750 84-356 (380)
89 KOG1387 Glycosyltransferase [C 99.8 3.6E-16 7.9E-21 164.4 28.6 378 278-756 43-445 (465)
90 TIGR00236 wecB UDP-N-acetylglu 99.8 6.3E-17 1.4E-21 179.6 24.1 266 393-746 75-345 (365)
91 cd03786 GT1_UDP-GlcNAc_2-Epime 99.8 1.1E-16 2.4E-21 176.6 24.6 258 395-742 79-344 (363)
92 PLN03064 alpha,alpha-trehalose 99.7 6.3E-16 1.4E-20 186.3 25.0 320 396-770 221-560 (934)
93 TIGR03713 acc_sec_asp1 accesso 99.7 9.9E-15 2.1E-19 168.8 24.6 170 572-769 319-519 (519)
94 cd04299 GT1_Glycogen_Phosphory 99.6 3.3E-14 7.2E-19 169.3 28.2 333 403-759 244-679 (778)
95 PF13692 Glyco_trans_1_4: Glyc 99.6 2.8E-15 6.1E-20 141.9 9.4 130 572-729 2-133 (135)
96 PF05693 Glycogen_syn: Glycoge 99.5 3.3E-13 7.1E-18 153.5 22.0 318 407-759 143-571 (633)
97 KOG2941 Beta-1,4-mannosyltrans 99.5 1.6E-12 3.5E-17 137.3 24.7 372 320-759 33-431 (444)
98 TIGR00215 lpxB lipid-A-disacch 99.5 1.5E-12 3.2E-17 146.2 25.1 257 395-748 80-364 (385)
99 PF00982 Glyco_transf_20: Glyc 99.3 1.3E-10 2.8E-15 133.1 24.3 310 396-756 131-461 (474)
100 PRK10117 trehalose-6-phosphate 99.3 2.1E-10 4.6E-15 130.0 25.6 322 396-770 113-452 (474)
101 PF13439 Glyco_transf_4: Glyco 99.3 2.7E-11 5.8E-16 118.1 11.0 166 299-533 9-176 (177)
102 PF13524 Glyco_trans_1_2: Glyc 99.2 3.2E-11 7E-16 107.2 9.8 86 668-759 1-86 (92)
103 PF13579 Glyco_trans_4_4: Glyc 99.2 1.4E-11 2.9E-16 118.1 7.9 160 302-527 1-160 (160)
104 PRK12446 undecaprenyldiphospho 99.2 8.4E-09 1.8E-13 114.6 30.5 301 301-740 11-330 (352)
105 COG0707 MurG UDP-N-acetylgluco 99.2 1.6E-08 3.4E-13 112.1 31.6 311 301-750 10-339 (357)
106 PLN02205 alpha,alpha-trehalose 99.2 1.9E-09 4E-14 131.3 26.3 311 395-751 189-534 (854)
107 COG0380 OtsA Trehalose-6-phosp 99.2 5.1E-09 1.1E-13 118.5 25.8 303 407-751 147-462 (486)
108 TIGR02919 accessory Sec system 99.0 7.9E-09 1.7E-13 117.5 18.7 135 588-750 291-426 (438)
109 PF09314 DUF1972: Domain of un 99.0 1.8E-08 3.8E-13 101.2 16.0 182 278-529 1-185 (185)
110 cd03784 GT1_Gtf_like This fami 98.9 2.2E-07 4.7E-12 104.5 25.0 123 570-729 238-370 (401)
111 PF13528 Glyco_trans_1_3: Glyc 98.8 2.9E-07 6.4E-12 100.0 21.4 116 570-726 191-315 (318)
112 PF08323 Glyco_transf_5: Starc 98.8 9E-09 2E-13 108.6 8.1 182 280-488 1-229 (245)
113 TIGR01426 MGT glycosyltransfer 98.8 2.9E-06 6.2E-11 95.4 27.5 91 639-745 273-369 (392)
114 TIGR03492 conserved hypothetic 98.7 4.3E-06 9.3E-11 94.5 25.4 150 571-749 204-378 (396)
115 TIGR03568 NeuC_NnaA UDP-N-acet 98.7 4.8E-06 1.1E-10 93.1 25.6 249 391-728 80-336 (365)
116 PF13477 Glyco_trans_4_2: Glyc 98.7 4.9E-07 1.1E-11 86.0 14.1 123 318-482 15-139 (139)
117 COG1519 KdtA 3-deoxy-D-manno-o 98.6 4.3E-05 9.4E-10 84.8 27.6 263 407-752 123-403 (419)
118 TIGR00661 MJ1255 conserved hyp 98.5 2E-05 4.3E-10 86.5 23.3 75 640-725 228-308 (321)
119 PF02350 Epimerase_2: UDP-N-ac 98.3 4.9E-05 1.1E-09 84.4 21.2 262 393-742 56-325 (346)
120 PF13844 Glyco_transf_41: Glyc 98.3 1.6E-05 3.5E-10 90.4 15.9 187 558-771 273-466 (468)
121 TIGR03590 PseG pseudaminic aci 98.3 0.00012 2.5E-09 79.0 21.6 97 572-697 171-268 (279)
122 PHA03392 egt ecdysteroid UDP-g 98.2 0.00097 2.1E-08 77.9 28.1 138 572-748 297-445 (507)
123 PF02684 LpxB: Lipid-A-disacch 98.1 0.00046 1E-08 77.1 21.6 241 405-741 80-346 (373)
124 PF04007 DUF354: Protein of un 97.9 0.0018 3.8E-08 71.5 23.2 62 659-728 243-307 (335)
125 KOG3742 Glycogen synthase [Car 97.9 3.2E-05 7E-10 84.9 8.4 94 660-759 496-602 (692)
126 PLN02448 UDP-glycosyltransfera 97.8 0.017 3.8E-07 66.7 29.5 139 571-748 274-429 (459)
127 COG1819 Glycosyl transferases, 97.7 0.00058 1.3E-08 77.5 15.2 136 571-746 237-379 (406)
128 PRK01021 lpxB lipid-A-disaccha 97.6 0.0073 1.6E-07 70.8 21.4 250 405-754 308-589 (608)
129 COG0763 LpxB Lipid A disacchar 97.4 0.0023 5.1E-08 70.6 14.1 200 405-696 83-290 (381)
130 PRK14986 glycogen phosphorylas 97.4 0.0032 6.9E-08 75.9 16.4 151 563-723 534-702 (815)
131 COG3914 Spy Predicted O-linked 97.4 0.0033 7.1E-08 72.1 14.8 183 562-771 422-613 (620)
132 PRK10017 colanic acid biosynth 97.3 0.1 2.2E-06 59.8 25.7 97 631-742 297-399 (426)
133 PF12000 Glyco_trans_4_3: Gkyc 97.2 0.0052 1.1E-07 61.3 12.4 111 395-533 55-170 (171)
134 cd04300 GT1_Glycogen_Phosphory 97.2 0.0092 2E-07 72.1 16.6 150 563-722 521-688 (797)
135 PLN02208 glycosyltransferase f 97.2 0.46 1E-05 54.7 29.8 65 680-748 340-415 (442)
136 COG4641 Uncharacterized protei 97.1 0.018 4E-07 63.3 17.2 109 641-759 237-351 (373)
137 COG0381 WecB UDP-N-acetylgluco 97.1 0.31 6.7E-06 54.3 26.0 256 405-745 90-351 (383)
138 PLN03007 UDP-glucosyltransfera 97.0 0.36 7.8E-06 56.3 27.9 78 640-729 344-438 (482)
139 PLN02554 UDP-glycosyltransfera 97.0 0.46 9.9E-06 55.4 28.5 88 641-741 342-447 (481)
140 PLN02173 UDP-glucosyl transfer 97.0 1.1 2.4E-05 51.8 31.1 92 640-748 316-420 (449)
141 PLN02562 UDP-glycosyltransfera 96.9 0.98 2.1E-05 52.2 29.4 140 571-743 273-421 (448)
142 COG0058 GlgP Glucan phosphoryl 96.8 0.029 6.3E-07 67.1 16.6 144 563-715 478-630 (750)
143 PLN02670 transferase, transfer 96.8 1.1 2.3E-05 52.2 28.6 87 680-771 368-465 (472)
144 PRK02797 4-alpha-L-fucosyltran 96.5 0.35 7.6E-06 52.4 20.7 171 572-773 145-318 (322)
145 PF08288 PIGA: PIGA (GPI ancho 96.4 0.014 3E-07 51.3 7.5 71 360-441 14-86 (90)
146 COG4671 Predicted glycosyl tra 96.4 0.74 1.6E-05 50.6 22.0 133 571-729 219-363 (400)
147 COG3980 spsG Spore coat polysa 96.3 0.12 2.7E-06 54.9 15.3 140 571-747 158-305 (318)
148 PLN02410 UDP-glucoronosyl/UDP- 96.3 3.2 7E-05 48.0 30.7 92 641-747 324-421 (451)
149 PLN02210 UDP-glucosyl transfer 96.2 3.3 7.2E-05 47.9 30.9 70 652-729 331-413 (456)
150 PF07429 Glyco_transf_56: 4-al 96.2 0.45 9.8E-06 52.3 19.5 121 572-706 184-306 (360)
151 KOG1050 Trehalose-6-phosphate 96.1 0.23 5E-06 60.1 18.5 292 394-730 128-439 (732)
152 PRK14985 maltodextrin phosphor 96.1 0.015 3.3E-07 69.9 8.3 151 563-723 520-688 (798)
153 TIGR02093 P_ylase glycogen/sta 96.1 0.032 6.9E-07 67.4 10.9 151 563-723 518-686 (794)
154 PLN00414 glycosyltransferase f 96.0 4.1 8.9E-05 47.1 31.9 89 652-750 319-418 (446)
155 PLN02863 UDP-glucoronosyl/UDP- 95.7 5.7 0.00012 46.3 29.8 79 641-729 343-431 (477)
156 PRK14089 ipid-A-disaccharide s 95.7 0.18 4E-06 56.1 14.4 91 573-696 169-261 (347)
157 PF06258 Mito_fiss_Elm1: Mitoc 95.6 0.95 2.1E-05 49.7 19.2 109 570-699 145-259 (311)
158 COG3660 Predicted nucleoside-d 95.5 2.4 5.1E-05 45.0 20.2 112 569-700 159-276 (329)
159 PLN02555 limonoid glucosyltran 95.3 7.7 0.00017 45.3 30.5 95 640-749 336-442 (480)
160 PF11440 AGT: DNA alpha-glucos 95.2 3.4 7.4E-05 44.1 20.4 146 569-729 177-351 (355)
161 PF00343 Phosphorylase: Carboh 95.1 0.32 6.9E-06 58.4 14.4 150 563-722 435-602 (713)
162 PLN02992 coniferyl-alcohol glu 95.0 9.7 0.00021 44.5 27.2 78 642-729 339-425 (481)
163 COG1817 Uncharacterized protei 94.5 5.4 0.00012 43.4 20.1 57 666-729 253-312 (346)
164 COG2327 WcaK Polysaccharide py 93.4 17 0.00036 41.0 26.7 96 631-741 256-357 (385)
165 PLN02764 glycosyltransferase f 93.0 21 0.00046 41.3 30.9 86 652-747 324-420 (453)
166 PLN00164 glucosyltransferase; 92.5 26 0.00056 41.0 31.0 50 680-729 368-429 (480)
167 PF04101 Glyco_tran_28_C: Glyc 92.0 0.079 1.7E-06 52.1 1.8 91 641-746 55-155 (167)
168 PF04464 Glyphos_transf: CDP-G 91.1 1.4 2.9E-05 49.3 10.7 132 563-729 185-334 (369)
169 PF00201 UDPGT: UDP-glucoronos 89.9 1.5 3.3E-05 51.0 10.1 132 571-744 276-418 (500)
170 PF05159 Capsule_synth: Capsul 89.5 27 0.00058 37.2 18.5 125 569-723 114-246 (269)
171 cd03789 GT1_LPS_heptosyltransf 89.0 2.5 5.4E-05 45.1 10.2 99 574-696 124-224 (279)
172 PF10933 DUF2827: Protein of u 88.9 3.7 8E-05 45.5 11.3 180 563-769 180-363 (364)
173 PLN03015 UDP-glucosyl transfer 88.7 54 0.0012 38.2 27.2 50 680-729 364-424 (470)
174 PLN03004 UDP-glycosyltransfera 87.5 7.8 0.00017 44.9 13.5 85 641-741 334-430 (451)
175 PRK10422 lipopolysaccharide co 85.2 7.6 0.00016 43.1 11.6 103 571-695 183-287 (352)
176 KOG0853 Glycosyltransferase [C 84.1 3.2 6.9E-05 48.1 8.0 100 470-603 205-304 (495)
177 PF01075 Glyco_transf_9: Glyco 83.6 8.2 0.00018 40.2 10.4 103 570-695 104-208 (247)
178 TIGR02195 heptsyl_trn_II lipop 82.8 12 0.00025 41.2 11.7 100 571-695 173-276 (334)
179 PF08660 Alg14: Oligosaccharid 80.6 19 0.00042 35.9 11.2 63 406-487 91-159 (170)
180 PLN02167 UDP-glycosyltransfera 80.2 12 0.00027 43.5 11.2 79 641-729 340-432 (475)
181 TIGR03609 S_layer_CsaB polysac 80.1 91 0.002 33.6 17.5 86 587-695 190-275 (298)
182 TIGR02193 heptsyl_trn_I lipopo 79.0 17 0.00038 39.5 11.3 99 571-695 179-279 (319)
183 TIGR02201 heptsyl_trn_III lipo 77.7 18 0.00039 39.8 11.1 102 572-695 182-285 (344)
184 COG0859 RfaF ADP-heptose:LPS h 76.2 19 0.00041 39.8 10.7 99 572-696 176-277 (334)
185 PF10087 DUF2325: Uncharacteri 76.0 9.6 0.00021 34.2 6.8 84 606-704 2-90 (97)
186 PF01975 SurE: Survival protei 75.4 24 0.00051 36.2 10.3 38 279-342 1-38 (196)
187 PF04413 Glycos_transf_N: 3-De 74.6 12 0.00027 37.8 8.0 69 407-488 95-163 (186)
188 PF06925 MGDG_synth: Monogalac 74.4 16 0.00034 36.1 8.6 60 405-488 87-151 (169)
189 PF12038 DUF3524: Domain of un 74.0 9.4 0.0002 38.0 6.6 83 406-496 58-141 (168)
190 PF11997 DUF3492: Domain of un 72.2 8.8 0.00019 41.3 6.5 80 406-485 171-256 (268)
191 PLN02152 indole-3-acetate beta 71.7 48 0.001 38.5 12.8 141 571-729 261-415 (455)
192 PRK10964 ADP-heptose:LPS hepto 70.3 32 0.00069 37.6 10.6 96 574-695 181-278 (322)
193 PF03401 TctC: Tripartite tric 69.8 59 0.0013 34.9 12.3 148 573-747 79-244 (274)
194 PRK10916 ADP-heptose:LPS hepto 67.1 40 0.00086 37.3 10.7 99 573-695 182-286 (348)
195 PRK02122 glucosamine-6-phospha 65.3 18 0.00038 44.0 7.8 106 208-340 291-408 (652)
196 COG1703 ArgK Putative periplas 64.0 55 0.0012 35.8 10.3 103 318-440 70-176 (323)
197 PLN02207 UDP-glycosyltransfera 63.0 77 0.0017 37.0 12.2 134 571-729 275-424 (468)
198 TIGR00715 precor6x_red precorr 62.1 33 0.00072 36.7 8.4 84 632-727 165-253 (256)
199 COG1618 Predicted nucleotide k 62.0 1.6E+02 0.0035 29.6 12.2 130 275-439 2-139 (179)
200 PF03016 Exostosin: Exostosin 61.2 20 0.00042 38.5 6.7 70 655-725 227-299 (302)
201 COG2910 Putative NADH-flavin r 58.4 9.9 0.00021 38.6 3.3 33 279-340 1-33 (211)
202 PRK13932 stationary phase surv 57.1 1.7E+02 0.0037 31.4 12.6 35 404-438 88-133 (257)
203 PF04230 PS_pyruv_trans: Polys 54.4 2.5E+02 0.0055 28.6 16.9 94 584-696 189-283 (286)
204 TIGR00087 surE 5'/3'-nucleotid 53.5 2.1E+02 0.0046 30.4 12.6 36 404-439 83-129 (244)
205 PRK06988 putative formyltransf 49.3 88 0.0019 34.4 9.3 19 318-339 16-34 (312)
206 PLN02534 UDP-glycosyltransfera 46.7 2.8E+02 0.0061 32.6 13.4 77 641-729 344-442 (491)
207 COG4088 Predicted nucleotide k 43.2 1.2E+02 0.0025 31.8 8.2 49 388-438 56-108 (261)
208 KOG1021 Acetylglucosaminyltran 42.3 2.2E+02 0.0048 33.1 11.7 97 656-758 335-434 (464)
209 COG1647 Esterase/lipase [Gener 41.8 1.3E+02 0.0028 31.6 8.4 43 394-438 73-115 (243)
210 COG0482 TrmU Predicted tRNA(5- 40.6 58 0.0013 36.4 6.2 106 301-440 11-126 (356)
211 KOG4626 O-linked N-acetylgluco 40.0 2.6E+02 0.0056 33.7 11.2 162 561-748 750-917 (966)
212 COG0569 TrkA K+ transport syst 39.5 1.4E+02 0.0031 31.0 8.7 30 406-435 65-97 (225)
213 KOG1192 UDP-glucuronosyl and U 38.5 4.4E+02 0.0095 30.3 13.5 141 572-746 278-433 (496)
214 PRK08057 cobalt-precorrin-6x r 38.2 2E+02 0.0043 30.6 9.6 40 396-438 57-100 (248)
215 PRK10840 transcriptional regul 37.2 4.2E+02 0.0091 26.6 11.7 110 604-730 4-125 (216)
216 TIGR02990 ectoine_eutA ectoine 37.1 2.5E+02 0.0053 29.7 10.0 34 405-438 179-214 (239)
217 COG2236 Predicted phosphoribos 35.6 89 0.0019 32.0 6.2 48 386-434 9-56 (192)
218 COG3580 Uncharacterized protei 35.4 3.5E+02 0.0075 29.8 10.6 166 574-770 23-195 (351)
219 PRK13935 stationary phase surv 34.7 6E+02 0.013 27.2 12.5 35 404-438 83-128 (253)
220 PRK13933 stationary phase surv 32.9 6.4E+02 0.014 27.0 12.8 35 404-438 84-129 (253)
221 PLN00016 RNA-binding protein; 32.5 44 0.00096 37.4 3.8 20 318-341 71-90 (378)
222 PF13407 Peripla_BP_4: Peripla 32.5 2.5E+02 0.0054 28.8 9.3 39 660-698 50-89 (257)
223 PRK03359 putative electron tra 31.7 1.7E+02 0.0036 31.4 7.8 34 407-440 112-149 (256)
224 COG1830 FbaB DhnA-type fructos 31.6 4.4E+02 0.0096 28.4 10.7 125 574-729 116-257 (265)
225 PF15024 Glyco_transf_18: Glyc 31.1 4.7E+02 0.01 31.2 11.7 126 572-730 277-429 (559)
226 TIGR00732 dprA DNA protecting 30.7 3.6E+02 0.0078 28.1 9.9 125 584-723 82-218 (220)
227 COG3171 Uncharacterized protei 30.6 42 0.0009 31.1 2.5 32 232-263 25-60 (119)
228 PLN02534 UDP-glycosyltransfera 30.3 5.9E+02 0.013 29.9 12.6 38 279-341 9-46 (491)
229 KOG2452 Formyltetrahydrofolate 30.2 39 0.00085 38.5 2.7 38 279-347 1-38 (881)
230 PRK04531 acetylglutamate kinas 29.9 1.3E+02 0.0029 34.2 7.1 55 570-642 35-91 (398)
231 PF02571 CbiJ: Precorrin-6x re 29.1 2E+02 0.0043 30.6 7.8 40 396-438 58-101 (249)
232 PF10649 DUF2478: Protein of u 29.1 1E+02 0.0022 30.6 5.2 40 656-695 84-129 (159)
233 PRK05562 precorrin-2 dehydroge 29.1 6.4E+02 0.014 26.4 11.4 125 603-752 48-179 (223)
234 PRK12342 hypothetical protein; 28.9 1.7E+02 0.0036 31.4 7.2 34 407-440 109-146 (254)
235 KOG0832 Mitochondrial/chloropl 28.7 6.8E+02 0.015 26.5 11.1 58 666-729 174-233 (251)
236 PRK13398 3-deoxy-7-phosphohept 28.6 6.8E+02 0.015 26.9 11.8 111 575-697 28-142 (266)
237 TIGR03642 cas_csx13 CRISPR-ass 27.7 2.2E+02 0.0047 27.1 6.9 101 318-430 9-116 (124)
238 TIGR01012 Sa_S2_E_A ribosomal 27.7 1.7E+02 0.0038 30.0 6.7 124 582-729 41-168 (196)
239 COG1519 KdtA 3-deoxy-D-manno-o 27.6 4.3E+02 0.0093 30.4 10.3 103 572-696 50-153 (419)
240 PLN02657 3,8-divinyl protochlo 27.5 63 0.0014 36.5 4.0 52 261-341 43-94 (390)
241 PF09752 DUF2048: Uncharacteri 27.2 3.6E+02 0.0077 30.3 9.5 41 396-438 165-205 (348)
242 COG0496 SurE Predicted acid ph 27.2 6.6E+02 0.014 26.9 11.1 35 406-440 82-127 (252)
243 PF08672 APC2: Anaphase promot 26.8 28 0.00061 28.7 0.7 36 5-40 13-51 (60)
244 TIGR01286 nifK nitrogenase mol 26.3 1E+03 0.022 28.2 13.7 82 626-729 235-335 (515)
245 PRK04020 rps2P 30S ribosomal p 26.1 3.2E+02 0.0069 28.3 8.4 125 582-729 47-174 (204)
246 PF05686 Glyco_transf_90: Glyc 26.1 1E+02 0.0022 35.2 5.2 80 686-771 234-317 (395)
247 COG1832 Predicted CoA-binding 25.8 5.3E+02 0.011 25.1 9.1 107 278-434 16-124 (140)
248 PF03358 FMN_red: NADPH-depend 25.7 67 0.0014 30.7 3.3 37 279-337 1-37 (152)
249 COG3473 Maleate cis-trans isom 25.5 7.9E+02 0.017 25.7 10.9 33 405-437 177-211 (238)
250 COG0052 RpsB Ribosomal protein 25.3 4.6E+02 0.01 28.0 9.4 146 549-717 5-203 (252)
251 PF03033 Glyco_transf_28: Glyc 25.2 45 0.00098 31.1 1.9 28 301-340 8-35 (139)
252 cd03146 GAT1_Peptidase_E Type 25.1 4.5E+02 0.0097 26.9 9.5 100 584-699 14-124 (212)
253 PRK08229 2-dehydropantoate 2-r 25.0 70 0.0015 35.1 3.7 19 318-340 16-34 (341)
254 CHL00194 ycf39 Ycf39; Provisio 24.8 71 0.0015 34.7 3.6 33 279-340 1-33 (317)
255 PRK10360 DNA-binding transcrip 24.7 6.3E+02 0.014 24.2 11.5 75 656-730 37-117 (196)
256 PF05728 UPF0227: Uncharacteri 24.3 4.3E+02 0.0093 26.8 8.9 31 410-440 61-91 (187)
257 COG4195 Phage-related replicat 24.0 87 0.0019 31.8 3.6 61 246-323 8-68 (208)
258 PRK00676 hemA glutamyl-tRNA re 23.6 1.1E+03 0.023 26.5 13.3 126 602-751 173-306 (338)
259 TIGR02853 spore_dpaA dipicolin 22.8 4.8E+02 0.01 28.3 9.5 104 318-437 15-120 (287)
260 smart00672 CAP10 Putative lipo 22.4 1.9E+02 0.0042 30.8 6.2 61 706-772 188-249 (256)
261 PRK13934 stationary phase surv 22.1 1E+03 0.022 25.7 11.8 34 405-438 82-127 (266)
262 cd07944 DRE_TIM_HOA_like 4-hyd 22.1 9.8E+02 0.021 25.5 15.0 154 583-756 104-265 (266)
263 PF03668 ATP_bind_2: P-loop AT 22.0 2.2E+02 0.0048 31.0 6.5 118 179-331 123-275 (284)
264 PF04844 Ovate: Transcriptiona 21.7 1.3E+02 0.0027 24.9 3.5 45 10-55 10-54 (59)
265 PRK05331 putative phosphate ac 21.2 1.1E+03 0.025 26.1 12.2 52 581-647 9-61 (334)
266 COG2204 AtoC Response regulato 21.2 1E+03 0.023 27.8 12.1 108 604-730 5-121 (464)
267 PLN02327 CTP synthase 21.2 9.1E+02 0.02 28.9 11.8 107 586-699 280-401 (557)
268 cd01972 Nitrogenase_VnfE_like 21.2 9.5E+02 0.021 27.4 12.0 100 584-695 137-243 (426)
269 PRK05380 pyrG CTP synthetase; 21.0 8.1E+02 0.018 29.2 11.3 99 594-699 279-382 (533)
270 COG1879 RbsB ABC-type sugar tr 21.0 5.1E+02 0.011 27.9 9.4 46 657-702 83-129 (322)
271 cd01020 TroA_b Metal binding p 21.0 3.3E+02 0.0071 29.0 7.7 88 658-750 46-134 (264)
272 cd03129 GAT1_Peptidase_E_like 20.9 8.8E+02 0.019 24.6 11.3 88 602-700 28-125 (210)
273 cd01967 Nitrogenase_MoFe_alpha 20.6 1.2E+03 0.027 26.1 14.8 115 583-729 134-256 (406)
274 PRK13478 phosphonoacetaldehyde 20.4 9.2E+02 0.02 25.3 11.0 98 583-700 102-207 (267)
No 1
>PLN00142 sucrose synthase
Probab=100.00 E-value=6.3e-188 Score=1633.54 Aligned_cols=767 Identities=81% Similarity=1.269 Sum_probs=739.7
Q ss_pred CCCCCCCCCcchHHHHHHHHhHhHHHHHHHHHHHHhcCCcccchhhHHHHHHhhhcCcccccccCCCcHHHHHhhcceee
Q 003987 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAI 80 (781)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 80 (781)
|++++|+|++||+|+++++|++|||+|++||+||+++||++||+|||+++|+++++++.++.++.+|+||++|++|||||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 81 (815)
T PLN00142 2 AAAPVLTRSHSIRERVPDALSQHRNELKALLSRYVAQGKGILQPHQLIDELEAVIDDDEERKKLLDGPFGDILRSTQEAI 81 (815)
T ss_pred CCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhhh
Confidence 56689999999999999999999999999999999999999999999999999987777788899999999999999999
Q ss_pred ecCCeEEEEEcCCCceEEEEEEecCcceeeecChHHHhhhcchhcccccCCCceeeeeccccccCCCCCCCCCCCCchhh
Q 003987 81 VLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQ 160 (781)
Q Consensus 81 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (781)
|.|||||||||||||+|||||||++||+||+|||+|||+|||+|||++.+++++|||||+|||++|||||+|+||||||+
T Consensus 82 ~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~ 161 (815)
T PLN00142 82 VLPPFVALAVRPRPGVWEYVRVNVSELSVEELTVSEYLKFKEELVDGSWNDNFVLELDFEPFNASFPRPTLSSSIGNGVQ 161 (815)
T ss_pred ccCCeeEEEEcCCCcceEEEEEEhhhCceeeecHHHhhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHH
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred hhhhhhhcccCCCCCCchhHHHHHhhcccCCeeeecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCcc
Q 003987 161 FLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 240 (781)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (781)
|||||||||||+|+++++|||||||+|+|+|++|||||||+|+++||++|++|++||+++|+||||++|+++||+|||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (815)
T PLN00142 162 FLNRHLSSKLFRDKESLEPLLDFLRAHNHKGETLMLNDRIQTLSKLQSALRKAEEYLSKLPKDTPYSEFEHRFQELGLEK 241 (815)
T ss_pred HHHHHHHHhhccCchhhhhHHHHHHHhhcCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcHHHHHHHHHHHHHhhcCCCcccHhhhhcCCCCceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHH
Q 003987 241 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEML 320 (781)
Q Consensus 241 gwg~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~r~p~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa 320 (781)
||||||+||+|||++|+|+|++|||++||+|++||||+|||+|||+||||+|.+++|+||||||++||+|||||||++|+
T Consensus 242 gwg~~~~~~~~~~~~l~~~~~~p~~~~~e~f~~~~p~~~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~ 321 (815)
T PLN00142 242 GWGDTAERVLETIHLLLDLLQAPDPSTLEKFLGRIPMVFNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEML 321 (815)
T ss_pred CcCccHHHHHHHHHHHHHHHhCCChhHHHHHHhhhhHhHhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHH
Q 003987 321 LRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEI 400 (781)
Q Consensus 321 ~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i 400 (781)
++|+++||+|+|+|+|+||.++++.+++|+++.|.+.++++++|+|+||++.++++++|+||+++|||+..|+.++.+.+
T Consensus 322 ~~l~~~G~~v~~~v~i~TR~i~~~~~~~~~~~~e~v~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~ 401 (815)
T PLN00142 322 LRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEI 401 (815)
T ss_pred HHHHhcCCCccceeEEEEeccCCccCCcccCcceeccCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999977899999999999999999999999999
Q ss_pred HHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEe
Q 003987 401 TAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480 (781)
Q Consensus 401 ~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt 480 (781)
.+..+++||+||+|||+++++|.++++++|||+|+|+|++++.|+..++.+|+..+..|+|++|+++|.++++.||+||+
T Consensus 402 ~~~~~~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIa 481 (815)
T PLN00142 402 LAELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIIT 481 (815)
T ss_pred HHhcCCCCCEEEECCccHHHHHHHHHHHhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHh
Confidence 77767899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccc
Q 003987 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (781)
Q Consensus 481 ~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 560 (781)
+|+++++++++.++||++|.+|+||++|++++|++++++|++|||||+|.+.|+|+.....+.+.+++.|++++|++.+.
T Consensus 482 sT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~ 561 (815)
T PLN00142 482 STYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQN 561 (815)
T ss_pred CcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHH
Confidence 99999999999999999999999999999999999999999999999999999999988888899999999999999999
Q ss_pred ccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003987 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (781)
Q Consensus 561 ~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~ 640 (781)
++++|++.++++++|+++||+++.||++.|++|++++.+.+++++|+|||++.++..+.+.++.++.++++++++++++.
T Consensus 562 ~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~ 641 (815)
T PLN00142 562 DEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLK 641 (815)
T ss_pred HHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCC
Confidence 99999887888999999999999999999999999998777889999999986555667788888889999999999999
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHH
Q 003987 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 720 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~ 720 (781)
++|+|+|.+.+..+.+++++++++++|+||+||++|+||++++||||||+|||||+.||+.|+|.+|++|++++|+|+++
T Consensus 642 ~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~ea 721 (815)
T PLN00142 642 GQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDE 721 (815)
T ss_pred CcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHH
Confidence 99999998888888899999999768999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 721 lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
+|++|.+++++|..|++.|++|+++|++++.++|||+.. ++.+.++.
T Consensus 722 LA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~--A~rll~L~ 768 (815)
T PLN00142 722 AANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIY--AERLLTLG 768 (815)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH--HHHHHHHH
Confidence 999999999889999999999999999999999999664 45555544
No 2
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=3.5e-181 Score=1577.35 Aligned_cols=744 Identities=73% Similarity=1.187 Sum_probs=716.6
Q ss_pred HHHHHHHHHHHHhcCCcccchhhHHHHHHhhhcCcccccccCCCcHHHHHhhcceeeecCCeEEEEEcCCCceEEEEEEe
Q 003987 24 RNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVN 103 (781)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~ 103 (781)
|++|++||+||+++||++||+|||+++|+++|.++.++.++.+|+||++|++||||||.|||||||||||||+|||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qe~~~~~~~~~~~~r~~~~~~~~~~~~ 80 (784)
T TIGR02470 1 RAELRQLLSRYVSQGKRYLLRHQLLDEFEQYCSDADKEKKLSESALGKLIFSTQEAIVLPPWVALAVRPRIGVWEYVRVN 80 (784)
T ss_pred ChHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhheecCCeeEEEEcCCCcceEEEEEE
Confidence 78999999999999999999999999999999776667889999999999999999999999999999999999999999
Q ss_pred cCcceeeecChHHHhhhcchhcccccCCCceeeeeccccccCCCCCCCCCCCCchhhhhhhhhhcccCCCCCCchhHHHH
Q 003987 104 VYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDF 183 (781)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (781)
++||+||+|||+|||+|||+|||++.+++++|||||+|||++|||||+||||||||+|||||||||||+|++++++||||
T Consensus 81 ~~~l~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~~~~r~~s~~~~~~~~~~~~~~~~ 160 (784)
T TIGR02470 81 VEELSVEELTISEYLDFKEQLVNGHPNDGFVLELDFEPFNASFPRPSDSKSIGNGVQFLNRHLSSKLFQDPESMEPLLNF 160 (784)
T ss_pred hhhCceeeecHHHHhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHHHHHHHHHHHhcCCchhhhhHHHH
Confidence 99999999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCeeeecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCccccCCcHHHHHHHHHHHHHhhcCC
Q 003987 184 LRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAP 263 (781)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~~~~~~~~p 263 (781)
||.|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+|+|++|
T Consensus 161 l~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~~~~~~~~~l~~~~~~p 240 (784)
T TIGR02470 161 LRVHNYNGIQLMINDRIQSVSHLQSQLRKAEEFLSALPPDTPYSEFEFELQELGFEPGWGDTAQRVLETLHLLDDLLEAP 240 (784)
T ss_pred HHHhccCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHhCCCCCcCccHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccHhhhhcCCCCceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCC
Q 003987 264 DPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPD 343 (781)
Q Consensus 264 ~~~~~~~f~~r~p~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~ 343 (781)
||++||+|++||||+|||+|||+|||++|.+++|.||||||++||++|||+||++|+++|+++||+|+|+|+|+||.+++
T Consensus 241 ~~~~~e~f~~~~p~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~ 320 (784)
T TIGR02470 241 DPSVLEAFLGRIPMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPD 320 (784)
T ss_pred ChhHHHHHHhhCCccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCcceeeecCCCCeEEEEeccCCCcc-cccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHH
Q 003987 344 AKGTTCNQRLERVSGTEHTHILRVPFRSEKG-ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVA 422 (781)
Q Consensus 344 ~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~-~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva 422 (781)
+.++.|+++.+.+.++++++|+|+|+++..+ ++++|++|+++|||+..|+.++.+.+.+..+++||+||+|||+++++|
T Consensus 321 ~~~~~~~~~~e~~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva 400 (784)
T TIGR02470 321 AEGTTCNQRLEKVYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVA 400 (784)
T ss_pred ccccccccccccccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHH
Confidence 9999999999999999999999999999877 899999999999999999999999998777789999999999999999
Q ss_pred HHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhcccccccccccccc
Q 003987 423 SLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAF 502 (781)
Q Consensus 423 ~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f 502 (781)
.++++++|+|+|+|+|++++.|+..++.+|...+.+|+++++++++.++|+.||+|||+|+++++++++.++||++|..|
T Consensus 401 ~lla~~lgVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~f 480 (784)
T TIGR02470 401 SLLARKLGVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAF 480 (784)
T ss_pred HHHHHhcCCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccc
Confidence 99999999999999999999999999999998999999999999999999999999999999999999999999999999
Q ss_pred ccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeecc
Q 003987 503 TLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD 582 (781)
Q Consensus 503 ~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~ 582 (781)
+||++|++++|++++++|++|||||+|.+.|+|++....+....++.+++++|++++.++++|++.++++|+|+++||++
T Consensus 481 t~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~ 560 (784)
T TIGR02470 481 TMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLD 560 (784)
T ss_pred cccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCC
Confidence 99999999999999999999999999999999999888888888999999999999999999998888999999999999
Q ss_pred CCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHH
Q 003987 583 HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYI 662 (781)
Q Consensus 583 ~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~l 662 (781)
+.||++.|++|+++++..+++++|+|||++.++..+.|+++.+++++++++++++++.++|+|+|++.+..+.+++|+++
T Consensus 561 ~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~i 640 (784)
T TIGR02470 561 RVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYI 640 (784)
T ss_pred ccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHh
Confidence 99999999999999877777899999999987677888999999999999999999999999999877677788999999
Q ss_pred HccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHH
Q 003987 663 ADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKI 742 (781)
Q Consensus 663 a~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~ 742 (781)
++++|+||+||++|+||++++||||||+|||||++||+.|+|.+|.+|++++|+|++++|++|.+++++|..||+.|++|
T Consensus 641 Ad~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~m 720 (784)
T TIGR02470 641 ADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKI 720 (784)
T ss_pred hccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 87789999999999999999999999999999999999999999999999999999999999999998888999999999
Q ss_pred HHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 743 SDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 743 s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
+++|++++.++|||+.. ++.+.++.
T Consensus 721 s~~a~~rV~~~FSW~~~--A~~ll~l~ 745 (784)
T TIGR02470 721 SQGGLQRIYEKYTWKIY--SERLLTLA 745 (784)
T ss_pred HHHHHHHHHHhCCHHHH--HHHHHHHH
Confidence 99999999999999764 34444443
No 3
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=100.00 E-value=9.7e-175 Score=1416.40 Aligned_cols=550 Identities=76% Similarity=1.203 Sum_probs=475.6
Q ss_pred CCCcchHHHHHHHHhHhHHHHHHHHHHHHhcCCcccchhhHHHHHHhhhcCcccccccCCCcHHHHHhhcceeeecCCeE
Q 003987 7 SRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFV 86 (781)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 86 (781)
||++||+|+|+++|++||++|++||+||+++||+|||||||+++|+++|+++.++.++.+|+||++|++||||||.||||
T Consensus 1 tr~~s~~e~~~~~L~~~R~~l~~llsr~~~~gk~~l~r~~ll~ef~~~~~~~~~~~~~~~g~lg~ll~~tQEaIv~pp~v 80 (550)
T PF00862_consen 1 TRSHSIRERVPDTLSQHRNELKRLLSRYVAQGKRYLLRHDLLDEFEAYCEDDKEKLFLLSGPLGELLRSTQEAIVLPPWV 80 (550)
T ss_dssp -------GGGTTTGGGTTSHHHHHHHHHHHHHTSSEEEECHHHHHTHHHHSTTTGCCT--STHHHHHHTEEEEEECSSEE
T ss_pred CcchhHHHHHHHHHHHhHHHHHHHHHHHHHcCcccccHHHHHHHHHHHHhcccchhhcccchHHHHHHhcceeEecCCeE
Confidence 79999999999999999999999999999999999999999999999998777778888999999999999999999999
Q ss_pred EEEEcCCCceEEEEEEecCcceeeecChHHHhhhcchhcccccCCCceeeeeccccccCCCCCCCCCCCCchhhhhhhhh
Q 003987 87 AIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHL 166 (781)
Q Consensus 87 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (781)
|||||||||+|||||||+++|+||+|||+|||+|||+|||++++++++|||||+|||++||+|++||||||||+||||||
T Consensus 81 ~lavRPrpg~WeyvRv~~~~L~vE~ltvseyL~fKE~LV~~~~~~~~vLElDf~PFn~~~Prlt~s~sIGnGv~FLNR~L 160 (550)
T PF00862_consen 81 ALAVRPRPGVWEYVRVNVDDLSVEELTVSEYLKFKERLVDGSANDEFVLELDFEPFNASFPRLTDSSSIGNGVQFLNRHL 160 (550)
T ss_dssp EEEEEEETTEEEEEEEESSSSEEEEE-HHHHHHHHHHHHHSS-SSTTS-EEE-GGGHTTS----SGGGTTBHHHHHHHHH
T ss_pred EEEEcCCCccEEEEEEEhhhCcceecCHHHHHHHHHHHcCCccCCCCeeeeecccccccCCCCCCcccccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCchhHHHHHhhcccCCeeeecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCccccCCcH
Q 003987 167 SSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTA 246 (781)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gwg~~~ 246 (781)
|||||+|++++++||+|||.|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||
T Consensus 161 Ssklf~d~e~~~~Ll~fL~~h~~~G~~Lmlndri~s~~~L~~aL~~A~~~L~~~p~~tpy~~f~~~~q~~Gfe~GWG~ta 240 (550)
T PF00862_consen 161 SSKLFQDKESLEPLLDFLRVHNYNGQQLMLNDRIQSVSKLQSALRKAEEFLSKLPPDTPYSEFEHKLQELGFEPGWGDTA 240 (550)
T ss_dssp HHHHTT-HHHHHHHHHHHHH-EETTEEBSB-TT--SHHHHHHHHHHHHHHHHHS-TT-BHHHHHHHHHHHTB-B-S-SBH
T ss_pred HHHhcCChHHHHHHHHHHHHhccCCeEeeecCCCCCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCCCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCcccHhhhhcCCCCceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHC
Q 003987 247 EHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQ 326 (781)
Q Consensus 247 ~~~~~~~~~~~~~~~~p~~~~~~~f~~r~p~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~ 326 (781)
+||+|||++|+|+|+||||++||+|++||||+|+|||+||||||+|+||||+||||||++||+|||||||++|..++..+
T Consensus 241 ~rv~et~~lL~dll~aPdp~~LE~Fl~RiPmvf~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~ 320 (550)
T PF00862_consen 241 ERVLETMHLLSDLLEAPDPSTLEKFLSRIPMVFNVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQ 320 (550)
T ss_dssp HHHHHHHHHHHHHHHS--HHHHHHHHHHS---SEEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCchHHHHHhhhcceeEEEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCC
Q 003987 327 GLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQG 406 (781)
Q Consensus 327 GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~ 406 (781)
|.+|.|+|+|+||.+|++.+++|+++++++.|++|++|+|+||++.+|++++|+||+++|||++.|+.++.+++.+++++
T Consensus 321 gl~i~p~i~i~TRlIpd~~~t~~~q~le~~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e~~~ 400 (550)
T PF00862_consen 321 GLDITPKIDIVTRLIPDAKGTTCNQRLEKVSGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAELQG 400 (550)
T ss_dssp T-----EEEEEEE--TBTTCGGGTSSEEEETTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHHHTS
T ss_pred CCCCCCceeeecccccCCcCCCccccccccCCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHH
Q 003987 407 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 486 (781)
Q Consensus 407 kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~ 486 (781)
+||+||+||+++|++|+++++++|||+|+|+|+++++||..++++|+.++.+|||+|||+||.++|+.||+|||||+||+
T Consensus 401 ~PdlI~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI 480 (550)
T PF00862_consen 401 KPDLIIGNYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEI 480 (550)
T ss_dssp --SEEEEEHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHH
T ss_pred CCcEEEeccCcchHHHHHHHhhcCCceehhhhccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccC
Q 003987 487 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFD 556 (781)
Q Consensus 487 ~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~ 556 (781)
+|+++++||||+|.+||||+|||+++||++|+|||+|||||+|.++|+|++++++|++.+|++|+++||+
T Consensus 481 ~g~~~~~gqyes~~~ftlpgLyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt~~~~Rl~~~~~~ie~Llfs 550 (550)
T PF00862_consen 481 AGQKDTVGQYESHKAFTLPGLYRVVNGIDVFDPKFNIVSPGADESIYFPYTEKERRLTSLHPEIEELLFS 550 (550)
T ss_dssp HB-SSSBHTTGGGSSEEETTTEEEEES--TT-TTEEE------TTTS--TT-TTTS-GGGHHHHHHHHH-
T ss_pred cCCccccCCccchhhcchHhHHhhhccccccCCcccccCCCCCcceecCCccccccchhhhHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999985
No 4
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=2.7e-57 Score=541.08 Aligned_cols=455 Identities=25% Similarity=0.443 Sum_probs=349.5
Q ss_pred ceeEEEEccCcCCccccc-CC-CCCcccceeehHHHHHHHHHHHHHHHHHCC--CceeecceEEEccCCCC-CCCccCcc
Q 003987 278 VFNVVILSPHGYFGQANV-LG-LPDTGGQVVYILDQVRALENEMLLRIKRQG--LDISPKILIVTRLIPDA-KGTTCNQR 352 (781)
Q Consensus 278 ~mrI~ivS~h~~~~~~~v-lg-~p~~GG~~vyvld~araL~~eLa~~L~~~G--heV~~~v~VvT~~~p~~-~~~~~~~~ 352 (781)
-|+|++||+||.|..+++ +| .+|||||.+||. +|+++|++.| |+|+ |+||.+.+. .+..|.+.
T Consensus 169 ~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~--------ELAraLa~~~gv~~Vd----l~TR~~~~~~~~~~y~~p 236 (1050)
T TIGR02468 169 KLYIVLISLHGLVRGENMELGRDSDTGGQVKYVV--------ELARALGSMPGVYRVD----LLTRQVSSPDVDWSYGEP 236 (1050)
T ss_pred ceEEEEEccccCccccCcccCCCCCCCChHHHHH--------HHHHHHHhCCCCCEEE----EEeCCcCccccccccCCc
Confidence 589999999999988887 88 499999999999 6666678888 8999 999997643 34456666
Q ss_pred eeee------------cCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHH-------c----CCCce
Q 003987 353 LERV------------SGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAE-------L----QGFPD 409 (781)
Q Consensus 353 ~e~v------------~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~-------~----~~kpD 409 (781)
.|.+ ...+|++|+|+|+++.. +++++..+|||+..|...+...+.+. . ...||
T Consensus 237 ~e~~~~~~~~~~~~~~~~~~g~rIvRip~GP~~----~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pD 312 (1050)
T TIGR02468 237 TEMLTPRSSENDGDEMGESSGAYIIRIPFGPRD----KYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPY 312 (1050)
T ss_pred cccccccccccccccccCCCCeEEEEeccCCCC----CCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCC
Confidence 5433 34569999999999863 36788999999999999998887541 1 12499
Q ss_pred EEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCC----CChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHH
Q 003987 410 FIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYP----DSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (781)
Q Consensus 410 IIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~----~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (781)
|||+||++++.+|.++++.+++|+|+|.|++...++. .....+...+..|++..++.+|..+++.||.|||+|.++
T Consensus 313 vIHaHyw~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE 392 (1050)
T TIGR02468 313 VIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQE 392 (1050)
T ss_pred EEEECcchHHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHH
Confidence 9999999999999999999999999999999877643 122344566778899999999999999999999999999
Q ss_pred Hhhccccccccccccccccccceee-----eccCC---CCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCc
Q 003987 486 IAGTKNTVGQYESHTAFTLPGLYRV-----VHGID---VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDP 557 (781)
Q Consensus 486 ~~~~k~~v~qyes~~~f~l~~ly~v-----~~gi~---~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~ 557 (781)
+. .||..|.+|. |.+|++ ..|+. .+.+|+.|||||+|++.|.|......+... ..++....+
T Consensus 393 ~~------eq~~lY~~~~-~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~---~~~~~~~~~ 462 (1050)
T TIGR02468 393 IE------EQWGLYDGFD-VILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETE---GNEEHPAKP 462 (1050)
T ss_pred HH------HHHHHhccCC-chhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhc---ccccccccc
Confidence 87 3555454444 444443 23333 346799999999999999986432211000 000000000
Q ss_pred ccc--ccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccC--CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHH
Q 003987 558 EQN--DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLR--ELVNLVVVAGYIDVNKSKDREEIAEIEKMHEL 633 (781)
Q Consensus 558 ~~~--~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~--~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~l 633 (781)
... .+....+.++++++|+++||+++.||++.|++||+++++.+ +++. +|+|++++. ........++...+.++
T Consensus 463 ~~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd~-d~l~~~~~~~l~~L~~l 540 (1050)
T TIGR02468 463 DPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDI-DEMSSGSSSVLTSVLKL 540 (1050)
T ss_pred cchhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCchh-hhhhccchHHHHHHHHH
Confidence 000 00011122678899999999999999999999999987543 3444 466776541 11111123456778899
Q ss_pred HHHcCCCCcEEEeccccCcCChHHHHHHHHccC----cEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCe
Q 003987 634 MKTYKLDGQFRWIAAQTNRARNGELYRYIADTK----GAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGAS 709 (781)
Q Consensus 634 i~elgL~~~V~flG~~~~~v~~~el~~~la~aa----dvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~ 709 (781)
++++++.++|.|+| .++.+++..+|+. + |+||+||++|+||++++||||||+|||+|+.||+.|+|.++.+
T Consensus 541 i~~lgL~g~V~FlG----~v~~edvp~lYr~-Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~n 615 (1050)
T TIGR02468 541 IDKYDLYGQVAYPK----HHKQSDVPDIYRL-AAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDN 615 (1050)
T ss_pred HHHhCCCCeEEecC----CCCHHHHHHHHHH-hhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCc
Confidence 99999999999999 5667788888874 4 7999999999999999999999999999999999999999999
Q ss_pred EEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHhc
Q 003987 710 GFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINVI 772 (781)
Q Consensus 710 G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~~ 772 (781)
|++++|.|++++|++|.+++ .|++.|++|+++|++++ ++|+|+. +++.|.+.+...
T Consensus 616 GlLVdP~D~eaLA~AL~~LL----~Dpelr~~m~~~gr~~v-~~FSWe~--ia~~yl~~i~~~ 671 (1050)
T TIGR02468 616 GLLVDPHDQQAIADALLKLV----ADKQLWAECRQNGLKNI-HLFSWPE--HCKTYLSRIASC 671 (1050)
T ss_pred EEEECCCCHHHHHHHHHHHh----hCHHHHHHHHHHHHHHH-HHCCHHH--HHHHHHHHHHHH
Confidence 99999999999999998887 89999999999999998 5799965 456666665543
No 5
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=2.1e-55 Score=487.99 Aligned_cols=452 Identities=41% Similarity=0.599 Sum_probs=396.2
Q ss_pred ecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCccccCCcHHHHHHHHHHHHHhhcCCCcccHhhhhcC
Q 003987 195 MLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGR 274 (781)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~r 274 (781)
|+||++++.+.+|+++.+|+..++.. .+||+..|.+.+++.++++|||.++.+|.+++++++
T Consensus 1 ~~~~~~~~~~~~qk~~~~~m~~~~~~-~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s----------------- 62 (495)
T KOG0853|consen 1 MTNDSSSNISELQKVLWKAMIEKSLL-VSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS----------------- 62 (495)
T ss_pred CcchhhhHHHHhhhhhhhhhhhhhcc-cccccccchhheeeccccccCchHHHhHHHHHHHHh-----------------
Confidence 78999999999999999999999999 999999999999999999999999999999999988
Q ss_pred CCCceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCccee
Q 003987 275 LPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLE 354 (781)
Q Consensus 275 ~p~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e 354 (781)
++. +||.||+||+++|+++++++|+.++..+..+.+.+++++|.|++...|...+ +.++
T Consensus 63 ----------------~~~-~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~----~~~~ 121 (495)
T KOG0853|consen 63 ----------------GQD-VLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILVVGDWLPRAMG----QFLE 121 (495)
T ss_pred ----------------ccc-ccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCceEEEEeecCcccc----hhhh
Confidence 555 8999999999999999999999999999999999999999999999888765 4556
Q ss_pred eecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEE
Q 003987 355 RVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQC 434 (781)
Q Consensus 355 ~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v 434 (781)
...++.+++|+++|+. ++.+|+ +.+||++..++ .+...+.+.+++ ||++|.++++++..+.+++++.|++.+
T Consensus 122 ~~~~~~~~~il~~~~~----~~~k~~--~~~d~~i~d~~-~~~~~l~~~~~~-p~~~~~i~~~~h~~~~lla~r~g~~~~ 193 (495)
T KOG0853|consen 122 QVAGCAYLRILRIPFG----ILFKWA--EKVDPIIEDFV-SACVPLLKQLSG-PDVIIKIYFYCHFPDSLLAKRLGVLKV 193 (495)
T ss_pred hhhccceeEEEEeccc----hhhhhh--hhhceeecchH-HHHHHHHHHhcC-CcccceeEEeccchHHHhccccCccce
Confidence 6667779999999993 456677 88999999888 566777777777 999999999999999999999999999
Q ss_pred EEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhcccccccccccccccccc-ceeeecc
Q 003987 435 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPG-LYRVVHG 513 (781)
Q Consensus 435 ~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~-ly~v~~g 513 (781)
++.|.++..++...+.+|+.+...|+++++|+++...++.+| ++++++++++...+.++|+++..+++|. .++.+++
T Consensus 194 l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~ 271 (495)
T KOG0853|consen 194 LYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSG 271 (495)
T ss_pred eehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecc
Confidence 999999999999999999999999999999999999999999 9999999999999999999999999999 9999999
Q ss_pred CCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHH
Q 003987 514 IDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVEC 593 (781)
Q Consensus 514 i~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA 593 (781)
+++|.++++++++|.|.+.+.+. .+.+++.|.+
T Consensus 272 ~d~~~~siN~~~pgkd~~l~l~a------~~~~~~~i~~----------------------------------------- 304 (495)
T KOG0853|consen 272 IDRFFPSINRFEPGKDQDLALPA------FTLLHDSIPE----------------------------------------- 304 (495)
T ss_pred cceEeeeeeecCCCCCceeehhh------HHhhhcccCC-----------------------------------------
Confidence 99999999999999999887772 1111111100
Q ss_pred HHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcC
Q 003987 594 YGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 673 (781)
Q Consensus 594 ~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS 673 (781)
...++.+++++|+.. .++.++|+.++.++|+++++++++.++++|.-. .....+.|++++++..+|++|+
T Consensus 305 -----~~~~~~hl~~~g~~G--~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~---s~~~~~~yrl~adt~~v~~qPa 374 (495)
T KOG0853|consen 305 -----PSISSEHLVVAGSRG--YDERDSENVEYLKELLSLIEEYDLLGQFVWFLP---STTRVAKYRLAADTKGVLYQPA 374 (495)
T ss_pred -----CCCCceEEEEecCCC--ccccchhhHHHHHHHHHHHHHhCccCceEEEec---CCchHHHHHHHHhcceEEecCC
Confidence 112456666666321 457899999999999999999999766665532 2334566999999888999999
Q ss_pred CCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHH---HHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 003987 674 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPD---QAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (781)
Q Consensus 674 ~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~---~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~ 750 (781)
. |.||+|++|||+||+|||||+.||+.|+|.++.+|++++| +.+ .+|++| .+|..||++|.+|+++|++++
T Consensus 375 ~-E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~a~~~----~kl~~~p~l~~~~~~~G~~rV 448 (495)
T KOG0853|consen 375 N-EHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAELADAL----LKLRRDPELWARMGKNGLKRV 448 (495)
T ss_pred C-CCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chHHHHHHHHHH----HHHhcCHHHHHHHHHHHHHHH
Confidence 9 9999999999999999999999999999999999999999 555 366666 455599999999999999999
Q ss_pred HHhcCcch
Q 003987 751 YERLVVSS 758 (781)
Q Consensus 751 ~~~ysw~~ 758 (781)
++.|||+.
T Consensus 449 ~e~fs~~~ 456 (495)
T KOG0853|consen 449 KEMFSWQH 456 (495)
T ss_pred HHHHhHHH
Confidence 99999944
No 6
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=5.7e-51 Score=463.29 Aligned_cols=425 Identities=28% Similarity=0.526 Sum_probs=316.5
Q ss_pred eeEEEEccCcCCcccc-cCCC-CCcccceeehHHHHHHHHHHHHHHHHHCCC--ceeecceEEEccCCCCC-CCccCcce
Q 003987 279 FNVVILSPHGYFGQAN-VLGL-PDTGGQVVYILDQVRALENEMLLRIKRQGL--DISPKILIVTRLIPDAK-GTTCNQRL 353 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~-vlg~-p~~GG~~vyvld~araL~~eLa~~L~~~Gh--eV~~~v~VvT~~~p~~~-~~~~~~~~ 353 (781)
+||+++|+||+|+|.+ ++|. |+.||+++|+. +|+++|+++|| +|+ |+|+.+++.. +..+....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~--------~La~~L~~~G~~~~V~----v~t~~~~~~~~~~~~~~~~ 68 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVL--------ELARALARRSEVEQVD----LVTRLIKDAKVSPDYAQPI 68 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHH--------HHHHHHHhCCCCcEEE----EEeccccCcCCCCccCCCe
Confidence 4899999999999988 7775 99999999999 77778899997 999 9998765421 12333333
Q ss_pred eeecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE
Q 003987 354 ERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 433 (781)
Q Consensus 354 e~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~ 433 (781)
+.. .++++|+|+|+... .|.++...++|+..+...+.+.+.+. ..+|||||+|++.+++++.++++..++|+
T Consensus 69 ~~~--~~gv~v~r~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~DvIH~h~~~~~~~~~~~~~~~~~p~ 140 (439)
T TIGR02472 69 ERI--APGARIVRLPFGPR-----RYLRKELLWPYLDELADNLLQHLRQQ-GHLPDLIHAHYADAGYVGARLSRLLGVPL 140 (439)
T ss_pred eEe--CCCcEEEEecCCCC-----CCcChhhhhhhHHHHHHHHHHHHHHc-CCCCCEEEEcchhHHHHHHHHHHHhCCCE
Confidence 322 34789999998653 24455677888888887777766542 34799999999888999999999999999
Q ss_pred EEEecCCcccCCC---CChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceee
Q 003987 434 CTIAHALEKTKYP---DSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRV 510 (781)
Q Consensus 434 v~t~H~l~~~k~~---~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v 510 (781)
|+|.|+....+.. .....++.+...|++......+..+++.+|.||++|.+++.. ++ ..
T Consensus 141 V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~------~~------------~~ 202 (439)
T TIGR02472 141 IFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEE------QY------------AL 202 (439)
T ss_pred EEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHH------HH------------Hh
Confidence 9999986432211 111112222333444444445778899999999999765431 11 11
Q ss_pred eccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHH
Q 003987 511 VHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGL 590 (781)
Q Consensus 511 ~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~L 590 (781)
..|++ ..|+.+||||+|.+.|.|......... +.+. ...++. ++++++|+++||+.+.||++.|
T Consensus 203 ~~~~~--~~ki~vIpnGvd~~~f~~~~~~~~~~~-----~~~~-------~~~~~~--~~~~~~i~~vGrl~~~Kg~~~l 266 (439)
T TIGR02472 203 YDSYQ--PERMQVIPPGVDLSRFYPPQSSEETSE-----IDNL-------LAPFLK--DPEKPPILAISRPDRRKNIPSL 266 (439)
T ss_pred ccCCC--ccceEEECCCcChhhcCCCCccccchh-----HHHH-------HHhhcc--ccCCcEEEEEcCCcccCCHHHH
Confidence 11333 679999999999998877532211000 0000 011232 4567899999999999999999
Q ss_pred HHHHHHhhccCCCeEEE-EEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccC---
Q 003987 591 VECYGKNSQLRELVNLV-VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTK--- 666 (781)
Q Consensus 591 ieA~~~l~~~~~~v~Lv-IVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aa--- 666 (781)
++|++++....+..+++ |+|+|++ .........++.+++.++++++++.++|+|+| .++.+++..+|+. +
T Consensus 267 i~A~~~l~~~~~~~~l~li~G~g~~-~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g----~~~~~~~~~~~~~-a~~~ 340 (439)
T TIGR02472 267 VEAYGRSPKLQEMANLVLVLGCRDD-IRKMESQQREVLQKVLLLIDRYDLYGKVAYPK----HHRPDDVPELYRL-AARS 340 (439)
T ss_pred HHHHHhChhhhhhccEEEEeCCccc-cccccHHHHHHHHHHHHHHHHcCCCceEEecC----CCCHHHHHHHHHH-Hhhc
Confidence 99998754333334454 5677654 11222233345566788899999999999999 5667889998884 4
Q ss_pred -cEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q 003987 667 -GAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDG 745 (781)
Q Consensus 667 -dvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~ 745 (781)
|+||+||.+|+||++++||||||+|||+|+.||+.|+|.++.+|++++|+|++++|++|.+++ +|++.+++|+++
T Consensus 341 ~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~ 416 (439)
T TIGR02472 341 RGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDAL----SDSSQWQLWSRN 416 (439)
T ss_pred CCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998887 899999999999
Q ss_pred HHHHHHHhcCcchhhhccchHHHH
Q 003987 746 GLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 746 a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
|++++.++|||+. +++.|++++
T Consensus 417 a~~~~~~~fsw~~--~~~~~~~l~ 438 (439)
T TIGR02472 417 GIEGVRRHYSWDA--HVEKYLRIL 438 (439)
T ss_pred HHHHHHHhCCHHH--HHHHHHHHh
Confidence 9999999999965 667787775
No 7
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=2.8e-42 Score=386.31 Aligned_cols=399 Identities=22% Similarity=0.304 Sum_probs=291.8
Q ss_pred EEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCC
Q 003987 281 VVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 360 (781)
Q Consensus 281 I~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~ 360 (781)
|++++.|+.|.. +.+..+.||.++|+. +|+++|+++||+|+ |+|.......+. ......
T Consensus 1 ~~~~~~~~~~~~--~~~~~~~GG~e~~v~--------~la~~L~~~G~~V~----v~~~~~~~~~~~-------~~~~~~ 59 (405)
T TIGR03449 1 VAMISMHTSPLQ--QPGTGDAGGMNVYIL--------ETATELARRGIEVD----IFTRATRPSQPP-------VVEVAP 59 (405)
T ss_pred CeEEeccCCccc--cCCCcCCCCceehHH--------HHHHHHhhCCCEEE----EEecccCCCCCC-------ccccCC
Confidence 678888887643 244455799999999 78888899999999 999764322111 111123
Q ss_pred CeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCC
Q 003987 361 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHAL 440 (781)
Q Consensus 361 ~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l 440 (781)
++++++++.....+ .+...+..++..|.....+.+......+||+||+|++.+++.+.++++..++|+|+|.|+.
T Consensus 60 ~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~ 134 (405)
T TIGR03449 60 GVRVRNVVAGPYEG-----LDKEDLPTQLCAFTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTL 134 (405)
T ss_pred CcEEEEecCCCccc-----CCHHHHHHHHHHHHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccch
Confidence 68888887654322 1111122222333333443333333458999999998888888889999999999999986
Q ss_pred cccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCc
Q 003987 441 EKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPK 520 (781)
Q Consensus 441 ~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k 520 (781)
...+. .++........ ......+...++.+|.++++|....+...+. .|.+ ..|
T Consensus 135 ~~~~~----~~~~~~~~~~~-~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~-------------------~~~~--~~k 188 (405)
T TIGR03449 135 AAVKN----AALADGDTPEP-EARRIGEQQLVDNADRLIANTDEEARDLVRH-------------------YDAD--PDR 188 (405)
T ss_pred HHHHH----HhccCCCCCch-HHHHHHHHHHHHhcCeEEECCHHHHHHHHHH-------------------cCCC--hhh
Confidence 43210 01000000000 0111234567899999999998765522111 1222 568
Q ss_pred eEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhcc
Q 003987 521 FNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL 600 (781)
Q Consensus 521 ~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~ 600 (781)
+.+||||+|.+.|.+.+....+ .++|+ ++++++|+++||+.+.||++.+++|++++.+.
T Consensus 189 i~vi~ngvd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~ 247 (405)
T TIGR03449 189 IDVVAPGADLERFRPGDRATER-------------------ARLGL--PLDTKVVAFVGRIQPLKAPDVLLRAVAELLDR 247 (405)
T ss_pred EEEECCCcCHHHcCCCcHHHHH-------------------HhcCC--CCCCcEEEEecCCCcccCHHHHHHHHHHHHhh
Confidence 9999999999888765332211 33555 45788999999999999999999999999777
Q ss_pred CCC--eEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCC
Q 003987 601 REL--VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (781)
Q Consensus 601 ~~~--v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 678 (781)
.++ ++|+|+|++... ...+.+.++++++++++.++|+|+| .++.+++..+++. +|++|+||..|+|
T Consensus 248 ~~~~~~~l~ivG~~~~~-------g~~~~~~l~~~~~~~~l~~~v~~~g----~~~~~~~~~~l~~-ad~~v~ps~~E~~ 315 (405)
T TIGR03449 248 DPDRNLRVIVVGGPSGS-------GLATPDALIELAAELGIADRVRFLP----PRPPEELVHVYRA-ADVVAVPSYNESF 315 (405)
T ss_pred CCCcceEEEEEeCCCCC-------cchHHHHHHHHHHHcCCCceEEECC----CCCHHHHHHHHHh-CCEEEECCCCCCc
Confidence 666 999999974320 0023567888999999999999999 6778899999995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcch
Q 003987 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSS 758 (781)
Q Consensus 679 GltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~ 758 (781)
|++++|||+||+|||+|+.||..|+|.++.+|++++++|+++++++|.+++ .|++.+++|++++++.+ ++|||+.
T Consensus 316 g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l----~~~~~~~~~~~~~~~~~-~~fsw~~ 390 (405)
T TIGR03449 316 GLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLL----DDPRTRIRMGAAAVEHA-AGFSWAA 390 (405)
T ss_pred ChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HhCCHHH
Confidence 999999999999999999999999999999999999999999999998887 79999999999999987 7899976
Q ss_pred hhhccchHHHHHh
Q 003987 759 DGIVDPSPFVINV 771 (781)
Q Consensus 759 ~~il~~ye~ll~~ 771 (781)
+ ++.|++++..
T Consensus 391 ~--~~~~~~~y~~ 401 (405)
T TIGR03449 391 T--ADGLLSSYRD 401 (405)
T ss_pred H--HHHHHHHHHH
Confidence 5 4555555543
No 8
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=1.1e-42 Score=398.26 Aligned_cols=425 Identities=17% Similarity=0.187 Sum_probs=283.9
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccC-cceeee-
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCN-QRLERV- 356 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~-~~~e~v- 356 (781)
|||++||.+.+|- ..+||+..+|. .|+++|+++||+|. |+|+.++........ ......
T Consensus 1 m~i~~vs~e~~P~-------~k~GGl~~~v~--------~L~~~L~~~G~~V~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (466)
T PRK00654 1 MKILFVASECAPL-------IKTGGLGDVVG--------ALPKALAALGHDVR----VLLPGYPAIREKLRDAQVVGRLD 61 (466)
T ss_pred CeEEEEEcccccC-------cccCcHHHHHH--------HHHHHHHHCCCcEE----EEecCCcchhhhhcCceEEEEee
Confidence 7999999998863 34899999999 77778899999999 999886543211000 000110
Q ss_pred --------cCCCCeEEEEeccCCCcccccccccccCchhh---HH---HHHHHHHHHHHHHcCCCceEEEEcCCCchHHH
Q 003987 357 --------SGTEHTHILRVPFRSEKGILRQWISRFDVWPY---LE---TFTEDVGSEITAELQGFPDFIIGNYSDGNLVA 422 (781)
Q Consensus 357 --------~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~y---l~---~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva 422 (781)
....++++++++.... ..+..++.| .. .|...+...+. .+..+|||||+|+|.+++++
T Consensus 62 ~~~~~~~~~~~~gv~v~~v~~~~~-------~~~~~~y~~~d~~~r~~~f~~~~~~~~~-~~~~~pDiiH~h~w~~~~~~ 133 (466)
T PRK00654 62 LFTVLFGHLEGDGVPVYLIDAPHL-------FDRPSGYGYPDNGERFAFFSWAAAEFAE-GLDPRPDIVHAHDWHTGLIP 133 (466)
T ss_pred eEEEEEEeEEcCCceEEEEeCHHH-------cCCCCCCCCcChHHHHHHHHHHHHHHHH-hcCCCCceEEECCcHHHHHH
Confidence 1124678888765321 112222222 11 23344444443 33569999999999999999
Q ss_pred HHHHHHc-----CCcEEEEecCCcccCCCCCh------hhHhhh-hccccchhhhhHHHHHHhhCCEEEecCHHHHhhcc
Q 003987 423 SLLAYKM-----GITQCTIAHALEKTKYPDSD------IYWKKF-DEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTK 490 (781)
Q Consensus 423 ~llar~~-----gvp~v~t~H~l~~~k~~~s~------~~~k~~-~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k 490 (781)
.++++.. ++|+|+|+|++......... +.+..+ .....+...+.....+++.||.|||+|+..++.+.
T Consensus 134 ~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~ 213 (466)
T PRK00654 134 ALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREIT 213 (466)
T ss_pred HHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhc
Confidence 9888763 79999999998654311100 000000 00111111223345678999999999987765332
Q ss_pred ccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhh-cchhhhccCccccccccCCCCC
Q 003987 491 NTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH-GSIEQLLFDPEQNDEHVGTLSD 569 (781)
Q Consensus 491 ~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~-~~i~~~l~~~~~~~~~~g~l~~ 569 (781)
+. + ..+.+.+.+ .....|+.+|+||+|.+.|.|.++..-.. .+. ..++....++...++++|+. +
T Consensus 214 ~~---~---~~~gl~~~~------~~~~~ki~vI~NGid~~~~~p~~~~~~~~-~~~~~~~~~k~~~k~~l~~~~gl~-~ 279 (466)
T PRK00654 214 TP---E---FGYGLEGLL------RARSGKLSGILNGIDYDIWNPETDPLLAA-NYSADDLEGKAENKRALQERFGLP-D 279 (466)
T ss_pred cc---c---CCcChHHHH------HhcccCceEecCCCCccccCCccCccccc-ccChhhhhchHHHHHHHHHHhCCC-C
Confidence 21 0 000111100 11256899999999999998854311000 000 00000000111234567874 3
Q ss_pred CCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE-ecc
Q 003987 570 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW-IAA 648 (781)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~f-lG~ 648 (781)
++.++|+++||+.+.||++.|++|++++.+. +++|+|+|+|+. ...+.+++++++++ +++.+ .|+
T Consensus 280 ~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~~~lvivG~g~~----------~~~~~l~~l~~~~~--~~v~~~~g~ 345 (466)
T PRK00654 280 DDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--GGQLVLLGTGDP----------ELEEAFRALAARYP--GKVGVQIGY 345 (466)
T ss_pred CCCcEEEEeeccccccChHHHHHHHHHHHhc--CCEEEEEecCcH----------HHHHHHHHHHHHCC--CcEEEEEeC
Confidence 4688999999999999999999999998753 799999999854 34567888888886 45665 552
Q ss_pred ccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC------CeEEEECCCCHHHHH
Q 003987 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG------ASGFHIDPYHPDQAA 722 (781)
Q Consensus 649 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg------~~G~lv~p~d~~~lA 722 (781)
+.+.+..+++ ++|+||+||.+|+||++++|||+||+|+|+|++||+.|+|.++ .+|++++|+|+++++
T Consensus 346 -----~~~~~~~~~~-~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la 419 (466)
T PRK00654 346 -----DEALAHRIYA-GADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLL 419 (466)
T ss_pred -----CHHHHHHHHh-hCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHH
Confidence 3344567778 5999999999999999999999999999999999999999988 899999999999999
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 723 ELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 723 ~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
++|.++++. ..+++.|.+|++++++ ++|||+.+ ++.|++++.
T Consensus 420 ~~i~~~l~~-~~~~~~~~~~~~~~~~---~~fsw~~~--a~~~~~lY~ 461 (466)
T PRK00654 420 RALRRALEL-YRQPPLWRALQRQAMA---QDFSWDKS--AEEYLELYR 461 (466)
T ss_pred HHHHHHHHH-hcCHHHHHHHHHHHhc---cCCChHHH--HHHHHHHHH
Confidence 999988732 2477789999888853 78999765 345555554
No 9
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=9.4e-41 Score=369.92 Aligned_cols=392 Identities=32% Similarity=0.525 Sum_probs=298.0
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+|++.|+.|.. -.|.|+.||.++++. +|++.|+++||+|+ |+|...+..... .....
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~~-------~~~~~ 59 (398)
T cd03800 1 RIALISLHGSPLA--QPGGADTGGQNVYVL--------ELARALARLGHEVD----IFTRRIDDALPP-------IVELA 59 (398)
T ss_pred CeEEEeccccccc--cCCCCCCCceeehHH--------HHHHHHhccCceEE----EEEecCCcccCC-------ccccc
Confidence 6899999976532 135689999999999 77777899999999 998664332111 01122
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~ 439 (781)
.++.+++++..... ..++..+++++..|...+.+.+... ..+||+||+|++..++++..+++..++|+|++.|+
T Consensus 60 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 133 (398)
T cd03800 60 PGVRVVRVPAGPAE-----YLPKEELWPYLDEFADDLLRFLRRE-GGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHS 133 (398)
T ss_pred cceEEEeccccccc-----CCChhhcchhHHHHHHHHHHHHHhc-CCCccEEEEecCccchHHHHHHhhcCCceEEEeec
Confidence 36788888765432 1233345666666766666666543 23899999999888888899999999999999998
Q ss_pred CcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003987 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (781)
Q Consensus 440 l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~ 519 (781)
+...........+. +........+..+++.+|.++++|......+... | +. ...
T Consensus 134 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~---~----------------~~--~~~ 187 (398)
T cd03800 134 LGAVKRRHLGAADT-----YEPARRIEAEERLLRAADRVIASTPQEAEELYSL---Y----------------GA--YPR 187 (398)
T ss_pred ccccCCcccccccc-----cchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH---c----------------cc--ccc
Confidence 76543222111111 1122223446678999999999998765422111 0 11 144
Q ss_pred ceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhc
Q 003987 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (781)
Q Consensus 520 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~ 599 (781)
++.+||||+|.+.|.+........ ..++. ..++++|+++||+++.||++.+++++.++.+
T Consensus 188 ~~~vi~ng~~~~~~~~~~~~~~~~------------------~~~~~--~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~ 247 (398)
T cd03800 188 RIRVVPPGVDLERFTPYGRAEARR------------------ARLLR--DPDKPRILAVGRLDPRKGIDTLIRAYAELPE 247 (398)
T ss_pred ccEEECCCCCccceecccchhhHH------------------Hhhcc--CCCCcEEEEEcccccccCHHHHHHHHHHHHH
Confidence 689999999998876654322110 11233 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCc
Q 003987 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFG 679 (781)
Q Consensus 600 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fG 679 (781)
..++++|+++|++.... .......++.+++++++.++|.|+| .++.+++..+++. +|++++||..|+||
T Consensus 248 ~~~~~~l~i~G~~~~~~------~~~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adi~l~ps~~e~~~ 316 (398)
T cd03800 248 LRERANLVIVGGPRDDI------LAMDEEELRELARELGVIDRVDFPG----RVSREDLPALYRA-ADVFVNPALYEPFG 316 (398)
T ss_pred hCCCeEEEEEECCCCcc------hhhhhHHHHHHHHhcCCCceEEEec----cCCHHHHHHHHHh-CCEEEecccccccC
Confidence 78899999999987621 1122345778888999999999999 6778899999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 680 LTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 680 ltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
++++|||+||+|||+|+.||..|+++++++|++++++|+++++++|.+++ .|++.+++|++++++.+.++|||+..
T Consensus 317 ~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~~~s~~~~ 392 (398)
T cd03800 317 LTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLL----TDPALRRRLSRAGLRRARARYTWERV 392 (398)
T ss_pred cHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 99999999999999999999999999999999999999999999998887 89999999999999999999999764
No 10
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=1.3e-40 Score=381.80 Aligned_cols=435 Identities=17% Similarity=0.181 Sum_probs=292.0
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCc-----ce
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQ-----RL 353 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~-----~~ 353 (781)
|||+++|...+|- -.+||+..++- .|+++|+++||+|. |+|+.++......... ..
T Consensus 1 m~i~~vs~E~~P~-------~k~GGl~~~v~--------~L~~aL~~~G~~v~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (473)
T TIGR02095 1 MRVLFVAAEMAPF-------AKTGGLADVVG--------ALPKALAALGHDVR----VLLPAYGCIEDEVDDQVKVVELV 61 (473)
T ss_pred CeEEEEEeccccc-------cCcCcHHHHHH--------HHHHHHHHcCCeEE----EEecCCcChhhhhccCeEEEEEE
Confidence 7999999988752 24899999999 77777899999999 9998876432110000 00
Q ss_pred e--------e----ecCCCCeEEEEeccCC---Ccc-cccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCC
Q 003987 354 E--------R----VSGTEHTHILRVPFRS---EKG-ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSD 417 (781)
Q Consensus 354 e--------~----v~~~~~~~I~rvp~~~---~~~-~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~ 417 (781)
+ . ....+++.++++.... ..+ +... +..+.......|...+...+.. ...+|||||+|.|.
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~v~~~~i~~~~~~~r~~~~y~~--~~~d~~~r~~~f~~a~~~~~~~-~~~~~DiiH~hdw~ 138 (473)
T TIGR02095 62 DLSVGPRTLYVKVFEGVVEGVPVYFIDNPSLFDRPGGIYGD--DYPDNAERFAFFSRAAAELLSG-LGWQPDVVHAHDWH 138 (473)
T ss_pred EEeecCceeEEEEEEEEECCceEEEEECHHHcCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHh-cCCCCCEEEECCcH
Confidence 0 0 0111356677664332 000 0000 0011111122344445554443 35699999999999
Q ss_pred chHHHHHHHHHcC---CcEEEEecCCcccCCCCCh-hhH-----hhhh-ccccchhhhhHHHHHHhhCCEEEecCHHHHh
Q 003987 418 GNLVASLLAYKMG---ITQCTIAHALEKTKYPDSD-IYW-----KKFD-EKYHFSCQFTADLIAMNNADFIITSTYQEIA 487 (781)
Q Consensus 418 ~~lva~llar~~g---vp~v~t~H~l~~~k~~~s~-~~~-----k~~~-~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~ 487 (781)
+++++.++++..+ +|+|+|+|++......... +.+ ..+. ..+.+...+.....+++.||.|+|+|+..++
T Consensus 139 ~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ 218 (473)
T TIGR02095 139 TALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAR 218 (473)
T ss_pred HHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHH
Confidence 9999999988876 9999999998643321111 111 0000 1111111233456689999999999987765
Q ss_pred hccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCC
Q 003987 488 GTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTL 567 (781)
Q Consensus 488 ~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l 567 (781)
.+... ..++.+.+.+ .....++.+|+||+|.+.|.|..+......--....+.....+...++++|+.
T Consensus 219 ei~~~------~~~~~l~~~l------~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~ 286 (473)
T TIGR02095 219 EILTP------EFGYGLDGVL------KARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLP 286 (473)
T ss_pred HhcCC------cCCccchhHH------HhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCC
Confidence 33221 0001111100 11256999999999999998754311000000000000000112234567885
Q ss_pred CCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003987 568 SDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (781)
Q Consensus 568 ~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG 647 (781)
.++++++|+++||+.+.||++.+++|+.++.+. +++|+|+|+|+. ...+.+++++++++ +++.+.+
T Consensus 287 ~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~----------~~~~~l~~~~~~~~--~~v~~~~ 352 (473)
T TIGR02095 287 VDDDVPLFGVISRLTQQKGVDLLLAALPELLEL--GGQLVVLGTGDP----------ELEEALRELAERYP--GNVRVII 352 (473)
T ss_pred ccCCCCEEEEEecCccccChHHHHHHHHHHHHc--CcEEEEECCCCH----------HHHHHHHHHHHHCC--CcEEEEE
Confidence 445889999999999999999999999998753 599999999853 33567777887764 5788887
Q ss_pred cccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC------CeEEEECCCCHHHH
Q 003987 648 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG------ASGFHIDPYHPDQA 721 (781)
Q Consensus 648 ~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg------~~G~lv~p~d~~~l 721 (781)
..+.+++..+++ ++|++|+||.+|+||++++|||+||+|||+|+.||+.|+|.++ .+|+++++.|++++
T Consensus 353 ----~~~~~~~~~~~~-~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~l 427 (473)
T TIGR02095 353 ----GYDEALAHLIYA-GADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGAL 427 (473)
T ss_pred ----cCCHHHHHHHHH-hCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHH
Confidence 455667788888 5999999999999999999999999999999999999999998 89999999999999
Q ss_pred HHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHh
Q 003987 722 AELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINV 771 (781)
Q Consensus 722 A~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~ 771 (781)
+++|.+++.....|++.|++|+++++ .++|||+++ ++.|++++..
T Consensus 428 a~~i~~~l~~~~~~~~~~~~~~~~~~---~~~fsw~~~--a~~~~~~Y~~ 472 (473)
T TIGR02095 428 LAALSRALRLYRQDPSLWEALQKNAM---SQDFSWDKS--AKQYVELYRS 472 (473)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHh---ccCCCcHHH--HHHHHHHHHh
Confidence 99999888544459999999999885 368999765 4667777653
No 11
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=3.2e-40 Score=389.48 Aligned_cols=458 Identities=15% Similarity=0.148 Sum_probs=303.2
Q ss_pred HHHhhcCCCcccHhhhhc--CC--CCceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCcee
Q 003987 256 LLDILQAPDPSTLEKFLG--RL--PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDIS 331 (781)
Q Consensus 256 ~~~~~~~p~~~~~~~f~~--r~--p~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~ 331 (781)
-.++.+.+|...+..|+. +. .+-|||++||.-..| .-.+||..-++- .|.++|+++||+|.
T Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~mkILfVasE~aP-------~aKtGGLaDVv~--------sLPkAL~~~GhdV~ 519 (977)
T PLN02939 455 YLSCKGKNEREAVENFLKLTLSGTSSGLHIVHIAAEMAP-------VAKVGGLADVVS--------GLGKALQKKGHLVE 519 (977)
T ss_pred HHHHhcCchHHHHHHHHHhccCCCCCCCEEEEEEccccc-------ccccccHHHHHH--------HHHHHHHHcCCeEE
Confidence 345567777776666654 22 245899999987775 246899998888 67777899999999
Q ss_pred ecceEEEccCCCCCCCccC-c-----cee-eecC-----------CCCeEEEEeccCCCcccccccccccCchhh-----
Q 003987 332 PKILIVTRLIPDAKGTTCN-Q-----RLE-RVSG-----------TEHTHILRVPFRSEKGILRQWISRFDVWPY----- 388 (781)
Q Consensus 332 ~~v~VvT~~~p~~~~~~~~-~-----~~e-~v~~-----------~~~~~I~rvp~~~~~~~~~~~isr~~i~~y----- 388 (781)
|+++.++........ . ... ...+ .+|+.++.+...... .+..|..++.+
T Consensus 520 ----VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~~----~fF~R~~iYg~~Dn~~ 591 (977)
T PLN02939 520 ----IVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPS----KFFWRAQYYGEHDDFK 591 (977)
T ss_pred ----EEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEEEEECCeeEEEEecCCch----hccCCCCCCCCccHHH
Confidence 999987643200000 0 000 0000 123444444211000 01122223311
Q ss_pred -HHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH------cCCcEEEEecCCcccCCCC-Chh-----hHhhh
Q 003987 389 -LETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK------MGITQCTIAHALEKTKYPD-SDI-----YWKKF 455 (781)
Q Consensus 389 -l~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~------~gvp~v~t~H~l~~~k~~~-s~~-----~~k~~ 455 (781)
+..|+..++..+. ..+.+|||||||.|.+++++.++.+. .++|.|+|+|++..+.... ..+ .+..+
T Consensus 592 RF~~FsrAaLe~~~-~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l 670 (977)
T PLN02939 592 RFSYFSRAALELLY-QSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQL 670 (977)
T ss_pred HHHHHHHHHHHHHH-hcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHc
Confidence 1233433444343 33579999999999999875554432 3589999999986544221 111 11111
Q ss_pred h---cc-ccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCC
Q 003987 456 D---EK-YHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMD 531 (781)
Q Consensus 456 ~---~~-y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~ 531 (781)
. .. ++|..++..-+..+..||.|+|+|+..+..+... + +..|.+. +.....|+.+|+||+|.+
T Consensus 671 ~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te---~----G~GL~~~------L~~~~~Kl~gIlNGID~e 737 (977)
T PLN02939 671 DRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSE---G----GRGLQDT------LKFHSKKFVGILNGIDTD 737 (977)
T ss_pred cChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHH---h----ccchHHH------hccccCCceEEecceehh
Confidence 0 00 0111222223345667999999999887643321 0 1112221 122367999999999999
Q ss_pred CCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCC-CCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEe
Q 003987 532 IYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSD-RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVA 610 (781)
Q Consensus 532 ~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~-~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG 610 (781)
.|.|.++.--...--...++....++...++++|+..+ ++.|+|+++||+.+.||++.+++|+.++.+ ++++|+|+|
T Consensus 738 ~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dvqLVIvG 815 (977)
T PLN02939 738 TWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGGQFVLLG 815 (977)
T ss_pred hcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCCEEEEEe
Confidence 99987542100000000011111223344567888532 467999999999999999999999988765 479999999
Q ss_pred CcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCC
Q 003987 611 GYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL 690 (781)
Q Consensus 611 ~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl 690 (781)
+|+.+ .+.+.++++++++++.++|+|+| ..+......+|+ ++|+||+||.+|+||++++|||+||+
T Consensus 816 dGp~~---------~~e~eL~~La~~l~l~drV~FlG----~~de~lah~IYA-aADIFLmPSr~EPfGLvqLEAMAyGt 881 (977)
T PLN02939 816 SSPVP---------HIQREFEGIADQFQSNNNIRLIL----KYDEALSHSIYA-ASDMFIIPSMFEPCGLTQMIAMRYGS 881 (977)
T ss_pred CCCcH---------HHHHHHHHHHHHcCCCCeEEEEe----ccCHHHHHHHHH-hCCEEEECCCccCCcHHHHHHHHCCC
Confidence 99751 34567889999999999999999 455556678888 59999999999999999999999999
Q ss_pred cEEEcCcccccccccc---------CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh--
Q 003987 691 PTFATCHGGPAEIIEH---------GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD-- 759 (781)
Q Consensus 691 PVVaT~~gG~~EiI~d---------g~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~-- 759 (781)
|+|++++||+.|+|.+ +.+||+++++|+++++++|.+++..+..||+.|++|+++++ .+.|||+.+
T Consensus 882 PPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am---~~dFSWe~~A~ 958 (977)
T PLN02939 882 VPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDM---NIDFSWDSSAS 958 (977)
T ss_pred CEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHH---HhcCCHHHHHH
Confidence 9999999999999875 57999999999999999999988666678999999998764 478999776
Q ss_pred hhccchHHHH
Q 003987 760 GIVDPSPFVI 769 (781)
Q Consensus 760 ~il~~ye~ll 769 (781)
.+.+.|++++
T Consensus 959 qYeeLY~~ll 968 (977)
T PLN02939 959 QYEELYQRAV 968 (977)
T ss_pred HHHHHHHHHH
Confidence 4444455544
No 12
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=1.3e-40 Score=374.45 Aligned_cols=396 Identities=12% Similarity=0.109 Sum_probs=280.4
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCC---ccCcceee
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGT---TCNQRLER 355 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~---~~~~~~e~ 355 (781)
|||+|+|.+++ |+.||.+.++. +|+++|.++||+|+ |+|+......+. ........
T Consensus 1 mkIlii~~~~~---------P~~~g~~~~~~--------~l~~~L~~~G~~V~----vit~~~~~~~~~~~~~~~~~~~~ 59 (412)
T PRK10307 1 MKILVYGINYA---------PELTGIGKYTG--------EMAEWLAARGHEVR----VITAPPYYPQWRVGEGYSAWRYR 59 (412)
T ss_pred CeEEEEecCCC---------CCccchhhhHH--------HHHHHHHHCCCeEE----EEecCCCCCCCCCCcccccccce
Confidence 79999997765 56799999998 77778899999999 999762111110 00101111
Q ss_pred ecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcE
Q 003987 356 VSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQ 433 (781)
Q Consensus 356 v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~--~lva~llar~~gvp~ 433 (781)
.....+++++|+|...... ...+. .+..+ ..|.......+.+....+||+||+|.+.. ...+.+++++.++|+
T Consensus 60 ~~~~~~i~v~r~~~~~~~~--~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~ 134 (412)
T PRK10307 60 RESEGGVTVWRCPLYVPKQ--PSGLK--RLLHL-GSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGART 134 (412)
T ss_pred eeecCCeEEEEccccCCCC--ccHHH--HHHHH-HHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCE
Confidence 1123478999998653210 00000 11111 12333333333332236899999987653 466778889999999
Q ss_pred EEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeecc
Q 003987 434 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHG 513 (781)
Q Consensus 434 v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~g 513 (781)
++++|+.+............ ....++. ...+..+++.||.||++|....+..++ .|
T Consensus 135 v~~~~d~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~ad~ii~~S~~~~~~~~~--------------------~~ 190 (412)
T PRK10307 135 WLHIQDYEVDAAFGLGLLKG--GKVARLA--TAFERSLLRRFDNVSTISRSMMNKARE--------------------KG 190 (412)
T ss_pred EEEeccCCHHHHHHhCCccC--cHHHHHH--HHHHHHHHhhCCEEEecCHHHHHHHHH--------------------cC
Confidence 99999865321100000000 0000111 124667889999999999987652211 13
Q ss_pred CCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHH
Q 003987 514 IDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVEC 593 (781)
Q Consensus 514 i~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA 593 (781)
++ ..++.+||||+|.+.|.|....... ..++.+|+ ++++++|+|+||+.+.||++.|++|
T Consensus 191 ~~--~~~i~vi~ngvd~~~~~~~~~~~~~----------------~~~~~~~~--~~~~~~i~~~G~l~~~kg~~~li~a 250 (412)
T PRK10307 191 VA--AEKVIFFPNWSEVARFQPVADADVD----------------ALRAQLGL--PDGKKIVLYSGNIGEKQGLELVIDA 250 (412)
T ss_pred CC--cccEEEECCCcCHhhcCCCCccchH----------------HHHHHcCC--CCCCEEEEEcCccccccCHHHHHHH
Confidence 33 5689999999999888765321100 01133565 5667899999999999999999999
Q ss_pred HHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcC
Q 003987 594 YGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 673 (781)
Q Consensus 594 ~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS 673 (781)
++++.+ .++++|+|+|+|+. .+.++++++++++. +|+|+| .++.+++..+++. +|++|+||
T Consensus 251 ~~~l~~-~~~~~l~ivG~g~~------------~~~l~~~~~~~~l~-~v~f~G----~~~~~~~~~~~~~-aDi~v~ps 311 (412)
T PRK10307 251 ARRLRD-RPDLIFVICGQGGG------------KARLEKMAQCRGLP-NVHFLP----LQPYDRLPALLKM-ADCHLLPQ 311 (412)
T ss_pred HHHhcc-CCCeEEEEECCChh------------HHHHHHHHHHcCCC-ceEEeC----CCCHHHHHHHHHh-cCEeEEee
Confidence 998854 57899999999976 67788899999996 799999 5677899999995 99999999
Q ss_pred CCCC----CcHHHHHHHHcCCcEEEcCccc--cccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 003987 674 FYEA----FGLTVVEAMTCGLPTFATCHGG--PAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGL 747 (781)
Q Consensus 674 ~~E~----fGltvlEAMa~GlPVVaT~~gG--~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~ 747 (781)
..|+ +|.+++|||+||+|||+|+.|| ..|++. ++|++++++|+++++++|.+++ +|++.+++|+++|+
T Consensus 312 ~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~ 385 (412)
T PRK10307 312 KAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALA----RQALLRPKLGTVAR 385 (412)
T ss_pred ccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHH
Confidence 9998 5777899999999999998876 458886 5899999999999999998887 89999999999999
Q ss_pred HHHHHhcCcchhhhccchHHHHHh
Q 003987 748 KRIYERLVVSSDGIVDPSPFVINV 771 (781)
Q Consensus 748 ~~~~~~ysw~~~~il~~ye~ll~~ 771 (781)
+++.++|||+. +++.|+++++.
T Consensus 386 ~~~~~~fs~~~--~~~~~~~~~~~ 407 (412)
T PRK10307 386 EYAERTLDKEN--VLRQFIADIRG 407 (412)
T ss_pred HHHHHHcCHHH--HHHHHHHHHHH
Confidence 99999999966 44555555544
No 13
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=1.7e-40 Score=372.30 Aligned_cols=366 Identities=15% Similarity=0.157 Sum_probs=270.2
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++++..+ |..||.++++. +|++.|+++||+|. |+|+..+...+. + ...
T Consensus 1 kI~~v~~~~~---------p~~GG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~------~--~~~ 51 (398)
T cd03796 1 RICMVSDFFY---------PNLGGVETHIY--------QLSQCLIKRGHKVV----VITHAYGNRVGI------R--YLT 51 (398)
T ss_pred CeeEEeeccc---------cccccHHHHHH--------HHHHHHHHcCCeeE----EEeccCCcCCCc------c--ccc
Confidence 7999997665 56899999999 77788899999999 998764322111 0 112
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCch--HHHHHHHHHcCCcEEEEe
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGN--LVASLLAYKMGITQCTIA 437 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~--lva~llar~~gvp~v~t~ 437 (781)
.++.++++|...... ...+. ....+...+.+.+. +.+|||||+|...+. ..+.++++..++|+|++.
T Consensus 52 ~~i~v~~~p~~~~~~-------~~~~~-~~~~~~~~l~~~~~---~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~ 120 (398)
T cd03796 52 NGLKVYYLPFVVFYN-------QSTLP-TFFGTFPLLRNILI---RERITIVHGHQAFSALAHEALLHARTMGLKTVFTD 120 (398)
T ss_pred CceeEEEecceeccC-------Ccccc-chhhhHHHHHHHHH---hcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEe
Confidence 357888888754211 00011 11112222223333 348999999987653 446777888999999999
Q ss_pred cCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003987 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (781)
Q Consensus 438 H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f 517 (781)
|+..... +..... +. ......++.+|.+|++|....+... ...+++
T Consensus 121 h~~~~~~----~~~~~~----~~-----~~~~~~~~~~d~ii~~s~~~~~~~~-------------------~~~~~~-- 166 (398)
T cd03796 121 HSLFGFA----DASSIH----TN-----KLLRFSLADVDHVICVSHTSKENTV-------------------LRASLD-- 166 (398)
T ss_pred ccccccc----chhhHH----hh-----HHHHHhhccCCEEEEecHhHhhHHH-------------------HHhCCC--
Confidence 9864211 000000 00 1123467899999999987643100 001222
Q ss_pred CCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHh
Q 003987 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (781)
Q Consensus 518 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l 597 (781)
..++.+||||+|.+.|.+.... .++++++|+++||+.+.||++.|++|+.++
T Consensus 167 ~~k~~vi~ngvd~~~f~~~~~~----------------------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 167 PERVSVIPNAVDSSDFTPDPSK----------------------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred hhhEEEEcCccCHHHcCCCccc----------------------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 5689999999998877654321 035678999999999999999999999999
Q ss_pred hccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCC
Q 003987 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (781)
Q Consensus 598 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 677 (781)
.+..++++|+|+|+|+. .+.++++++++++.++|.|+| .++.+++..+++. +|++|+||..|+
T Consensus 219 ~~~~~~~~l~i~G~g~~------------~~~l~~~~~~~~l~~~v~~~G----~~~~~~~~~~l~~-ad~~v~pS~~E~ 281 (398)
T cd03796 219 CKKHPNVRFIIGGDGPK------------RILLEEMREKYNLQDRVELLG----AVPHERVRDVLVQ-GHIFLNTSLTEA 281 (398)
T ss_pred HhhCCCEEEEEEeCCch------------HHHHHHHHHHhCCCCeEEEeC----CCCHHHHHHHHHh-CCEEEeCChhhc
Confidence 88889999999999865 567889999999999999999 6677899999995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcc
Q 003987 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVS 757 (781)
Q Consensus 678 fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~ 757 (781)
||++++|||+||+|||+|+.||..|++.++. +++++ .|+++++++|.+++ .++.....+++++++++.++|||+
T Consensus 282 ~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~-~~~~~-~~~~~l~~~l~~~l----~~~~~~~~~~~~~~~~~~~~fs~~ 355 (398)
T cd03796 282 FCIAIVEAASCGLLVVSTRVGGIPEVLPPDM-ILLAE-PDVESIVRKLEEAI----SILRTGKHDPWSFHNRVKKMYSWE 355 (398)
T ss_pred cCHHHHHHHHcCCCEEECCCCCchhheeCCc-eeecC-CCHHHHHHHHHHHH----hChhhhhhHHHHHHHHHHhhCCHH
Confidence 9999999999999999999999999998764 44454 48999999999887 566666678899999999999998
Q ss_pred hh--hhccchHHHHH
Q 003987 758 SD--GIVDPSPFVIN 770 (781)
Q Consensus 758 ~~--~il~~ye~ll~ 770 (781)
.+ .+++.|++++.
T Consensus 356 ~~~~~~~~~y~~l~~ 370 (398)
T cd03796 356 DVAKRTEKVYDRILQ 370 (398)
T ss_pred HHHHHHHHHHHHHhc
Confidence 76 55556666553
No 14
>PLN02316 synthase/transferase
Probab=100.00 E-value=1.4e-39 Score=390.51 Aligned_cols=405 Identities=14% Similarity=0.064 Sum_probs=278.7
Q ss_pred ceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCcc-Ccce-ee
Q 003987 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTC-NQRL-ER 355 (781)
Q Consensus 278 ~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~-~~~~-e~ 355 (781)
+|||++||.+..|- -.+||...+|. .|+++|+++||+|. |+|+.++....... .... ..
T Consensus 587 pM~Il~VSsE~~P~-------aKvGGLgDVV~--------sLp~ALa~~Gh~V~----VitP~Y~~i~~~~~~~~~~~~~ 647 (1036)
T PLN02316 587 PMHIVHIAVEMAPI-------AKVGGLGDVVT--------SLSRAVQDLNHNVD----IILPKYDCLNLSHVKDLHYQRS 647 (1036)
T ss_pred CcEEEEEEcccCCC-------CCcCcHHHHHH--------HHHHHHHHcCCEEE----EEecCCcccchhhcccceEEEE
Confidence 48999999998863 35899999999 77777899999999 99998764210000 0000 00
Q ss_pred e-----------cCCCCeEEEEeccCCCcccccccccccCch------hhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc
Q 003987 356 V-----------SGTEHTHILRVPFRSEKGILRQWISRFDVW------PYLETFTEDVGSEITAELQGFPDFIIGNYSDG 418 (781)
Q Consensus 356 v-----------~~~~~~~I~rvp~~~~~~~~~~~isr~~i~------~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~ 418 (781)
+ ...+++.++.+.... + +..+..++ ..+..|+..++..+.. ...+|||||+|+|.+
T Consensus 648 ~~~~~~~~~v~~~~~~GV~vyfl~~~~--~----~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~~-~~~~PDIIHaHDW~t 720 (1036)
T PLN02316 648 YSWGGTEIKVWFGKVEGLSVYFLEPQN--G----MFWAGCVYGCRNDGERFGFFCHAALEFLLQ-SGFHPDIIHCHDWSS 720 (1036)
T ss_pred eccCCEEEEEEEEEECCcEEEEEeccc--c----ccCCCCCCCchhHHHHHHHHHHHHHHHHHh-cCCCCCEEEECCChH
Confidence 0 011245555554221 1 11111122 1223344444444433 356899999999999
Q ss_pred hHHHHHHHHHc------CCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhcccc
Q 003987 419 NLVASLLAYKM------GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNT 492 (781)
Q Consensus 419 ~lva~llar~~------gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~ 492 (781)
++++.++++.+ ++|+|+|+|++.... ++ ...++..||.|+|+|+..+..+...
T Consensus 721 alva~llk~~~~~~~~~~~p~V~TiHnl~~~~---------------n~------lk~~l~~AD~ViTVS~tya~EI~~~ 779 (1036)
T PLN02316 721 APVAWLFKDHYAHYGLSKARVVFTIHNLEFGA---------------NH------IGKAMAYADKATTVSPTYSREVSGN 779 (1036)
T ss_pred HHHHHHHHHhhhhhccCCCCEEEEeCCcccch---------------hH------HHHHHHHCCEEEeCCHHHHHHHHhc
Confidence 99988887753 589999999864211 00 1246789999999999876532210
Q ss_pred ccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhh-hhcchhhhccCccccccccCCCCCCC
Q 003987 493 VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTA-LHGSIEQLLFDPEQNDEHVGTLSDRS 571 (781)
Q Consensus 493 v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~-~~~~i~~~l~~~~~~~~~~g~l~~~~ 571 (781)
.++.....|+.+|+||||.+.|.|.++....... ....++-........++++|+. +++
T Consensus 780 -------------------~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~-~~d 839 (1036)
T PLN02316 780 -------------------SAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLK-QAD 839 (1036)
T ss_pred -------------------cCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCC-ccc
Confidence 0122124699999999999998876432100000 0000000000111234568884 246
Q ss_pred CCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC--CCcEEEeccc
Q 003987 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL--DGQFRWIAAQ 649 (781)
Q Consensus 572 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL--~~~V~flG~~ 649 (781)
.|+|+++|||.+.||++.|++|+.++.+ .+++|+|+|+|+++ .+.+.++++++++++ +++|.|.|.
T Consensus 840 ~plVg~VGRL~~qKGvdlLi~Al~~ll~--~~~qlVIvG~Gpd~---------~~e~~l~~La~~Lg~~~~~rV~f~g~- 907 (1036)
T PLN02316 840 LPLVGIITRLTHQKGIHLIKHAIWRTLE--RNGQVVLLGSAPDP---------RIQNDFVNLANQLHSSHHDRARLCLT- 907 (1036)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHHhh--cCcEEEEEeCCCCH---------HHHHHHHHHHHHhCccCCCeEEEEec-
Confidence 8999999999999999999999999865 37999999999761 335678889998876 578999883
Q ss_pred cCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC-------------CeEEEECCC
Q 003987 650 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG-------------ASGFHIDPY 716 (781)
Q Consensus 650 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg-------------~~G~lv~p~ 716 (781)
.+......+|+ ++|+||+||++|+||++.+|||+||+|+|++++||++|+|.++ .+||++++.
T Consensus 908 ---~de~lah~iya-aADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~ 983 (1036)
T PLN02316 908 ---YDEPLSHLIYA-GADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGA 983 (1036)
T ss_pred ---CCHHHHHHHHH-hCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCC
Confidence 22222346777 5999999999999999999999999999999999999999884 699999999
Q ss_pred CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 717 HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 717 d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
|+++++.+|.+++... ++....+++.+++.+.+.|||+.+ ++.|++++.
T Consensus 984 d~~aLa~AL~raL~~~---~~~~~~~~~~~r~~m~~dFSW~~~--A~~Y~~LY~ 1032 (1036)
T PLN02316 984 DAAGVDYALNRAISAW---YDGRDWFNSLCKRVMEQDWSWNRP--ALDYMELYH 1032 (1036)
T ss_pred CHHHHHHHHHHHHhhh---hhhHHHHHHHHHHHHHhhCCHHHH--HHHHHHHHH
Confidence 9999999999888422 344556778888888899999765 466666664
No 15
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=1.5e-39 Score=373.66 Aligned_cols=439 Identities=16% Similarity=0.174 Sum_probs=288.8
Q ss_pred CCceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCc--cCc--
Q 003987 276 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTT--CNQ-- 351 (781)
Q Consensus 276 p~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~--~~~-- 351 (781)
|| |||+++|.-..| .-.|||..-.+- .|.++|+++||+|. |+++.+..-.... ...
T Consensus 4 ~~-~~il~v~~E~~p-------~~k~Ggl~dv~~--------~Lp~al~~~g~~v~----v~~P~y~~~~~~~~~~~~~~ 63 (489)
T PRK14098 4 RN-FKVLYVSGEVSP-------FVRVSALADFMA--------SFPQALEEEGFEAR----IMMPKYGTINDRKFRLHDVL 63 (489)
T ss_pred CC-cEEEEEeecchh-------hcccchHHHHHH--------HHHHHHHHCCCeEE----EEcCCCCchhhhhhccccce
Confidence 55 999999987775 357899887777 66777899999999 9988765432110 000
Q ss_pred ceeee--cCCCCeEEEEec--cCCCcc---c-c--cccccccCch----------hhHH---HHHHHHHHHHHHHcCCCc
Q 003987 352 RLERV--SGTEHTHILRVP--FRSEKG---I-L--RQWISRFDVW----------PYLE---TFTEDVGSEITAELQGFP 408 (781)
Q Consensus 352 ~~e~v--~~~~~~~I~rvp--~~~~~~---~-~--~~~isr~~i~----------~yl~---~f~~~~~~~i~~~~~~kp 408 (781)
....+ .-.....+.++- ..+..+ + + ..+..|..++ .-.+ .|...+...+. ....+|
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~-~~~~~p 142 (489)
T PRK14098 64 RLSDIEVPLKEKTDLLHVKVTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQ-RLGWKP 142 (489)
T ss_pred EEEEEEEeecCeeEEEEEEEecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHH-hcCCCC
Confidence 01010 000011222110 000000 0 0 0111222222 1122 33333444443 235689
Q ss_pred eEEEEcCCCchHHHHHHHHHc-------CCcEEEEecCCcccCCCCChhhH-----hhhhccccchhhhhHHHHHHhhCC
Q 003987 409 DFIIGNYSDGNLVASLLAYKM-------GITQCTIAHALEKTKYPDSDIYW-----KKFDEKYHFSCQFTADLIAMNNAD 476 (781)
Q Consensus 409 DIIh~~~~~~~lva~llar~~-------gvp~v~t~H~l~~~k~~~s~~~~-----k~~~~~y~f~~~~~~e~~a~~~AD 476 (781)
||||+|+|.+++++.++++.. ++|+|+|+|++..+......... ........+...+...+.+++.||
T Consensus 143 DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad 222 (489)
T PRK14098 143 DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHAD 222 (489)
T ss_pred CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcC
Confidence 999999999999999888765 79999999997654322111110 100000011112334566889999
Q ss_pred EEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhh-cchhhhcc
Q 003987 477 FIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH-GSIEQLLF 555 (781)
Q Consensus 477 ~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~-~~i~~~l~ 555 (781)
.|+|+|+..++.+.+.. ...+.+++..+ ....|+.+|+||+|.+.|.|.++..-+. .+. ..++...-
T Consensus 223 ~VitVS~~~a~ei~~~~-----~~~~gl~~~l~------~~~~kl~~I~NGID~~~~~p~~d~~~~~-~~~~~~~~~k~~ 290 (489)
T PRK14098 223 LLTTTSPRYAEEIAGDG-----EEAFGLDKVLE------ERKMRLHGILNGIDTRQWNPSTDKLIKK-RYSIERLDGKLE 290 (489)
T ss_pred cceeeCHHHHHHhCcCC-----CCCcChHHHHH------hcCCCeeEEeCCccccccCCcccccccc-cCCcchhhhHHH
Confidence 99999998876433210 01112222111 1156999999999999998865321000 000 00000001
Q ss_pred CccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH
Q 003987 556 DPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 635 (781)
Q Consensus 556 ~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~ 635 (781)
++...++.+|++.++++++|+++||+.+.||++.+++|+.++.+ ++++|+|+|+|+. .+.+.++++++
T Consensus 291 ~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~--~~~~lvivG~G~~----------~~~~~l~~l~~ 358 (489)
T PRK14098 291 NKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE--LDIQLVICGSGDK----------EYEKRFQDFAE 358 (489)
T ss_pred HHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh--cCcEEEEEeCCCH----------HHHHHHHHHHH
Confidence 11223356788766788999999999999999999999999875 3799999999864 34578888888
Q ss_pred HcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc----CCeEE
Q 003987 636 TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH----GASGF 711 (781)
Q Consensus 636 elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d----g~~G~ 711 (781)
++ .++|.|+| .++.+++..+++ ++|+||+||.+|+||++.+|||+||+|+|++++||..|+|.+ +.+|+
T Consensus 359 ~~--~~~V~~~g----~~~~~~~~~~~a-~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~ 431 (489)
T PRK14098 359 EH--PEQVSVQT----EFTDAFFHLAIA-GLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGF 431 (489)
T ss_pred HC--CCCEEEEE----ecCHHHHHHHHH-hCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCcee
Confidence 87 47899999 566778889999 599999999999999999999999999999999999998864 67999
Q ss_pred EECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHhc
Q 003987 712 HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINVI 772 (781)
Q Consensus 712 lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~~ 772 (781)
+++++|+++++++|.++++ +..|++.|+++++++. .++|||+.+ ++.|++++..+
T Consensus 432 l~~~~d~~~la~ai~~~l~-~~~~~~~~~~~~~~~~---~~~fsw~~~--a~~y~~lY~~~ 486 (489)
T PRK14098 432 IFHDYTPEALVAKLGEALA-LYHDEERWEELVLEAM---ERDFSWKNS--AEEYAQLYREL 486 (489)
T ss_pred EeCCCCHHHHHHHHHHHHH-HHcCHHHHHHHHHHHh---cCCCChHHH--HHHHHHHHHHH
Confidence 9999999999999988763 4478999999887663 478999765 35566555543
No 16
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=8.7e-39 Score=354.86 Aligned_cols=376 Identities=23% Similarity=0.292 Sum_probs=269.8
Q ss_pred eeEEEEccCcCCcccccCCCCC-cccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeec
Q 003987 279 FNVVILSPHGYFGQANVLGLPD-TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVS 357 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~-~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~ 357 (781)
|||++++.... |+ .||.++++. +|+++|+++ |+|+ |+|..... .
T Consensus 1 mkI~~i~~~~~---------p~~~GG~~~~v~--------~l~~~l~~~-~~v~----v~~~~~~~-------------~ 45 (388)
T TIGR02149 1 MKVTVLTREYP---------PNVYGGAGVHVE--------ELTRELARL-MDVD----VRCFGDQR-------------F 45 (388)
T ss_pred CeeEEEecccC---------ccccccHhHHHH--------HHHHHHHHh-cCee----EEcCCCch-------------h
Confidence 79999987544 44 499999999 666667776 7887 66643211 0
Q ss_pred CCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEe
Q 003987 358 GTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIA 437 (781)
Q Consensus 358 ~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~ 437 (781)
...++.+.+++..... ......+..+..++. ......+||+||+|.+.+++.+.++++..++|++++.
T Consensus 46 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~---~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p~v~~~ 113 (388)
T TIGR02149 46 DSEGLTVKGYRPWSEL---------KEANKALGTFSVDLA---MANDPVDADVVHSHTWYTFLAGHLAKKLYDKPLVVTA 113 (388)
T ss_pred cCCCeEEEEecChhhc---------cchhhhhhhhhHHHH---HhhCCCCCCeEeecchhhhhHHHHHHHhcCCCEEEEe
Confidence 1235677766543210 111122222222221 1111347999999998888778877888899999999
Q ss_pred cCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003987 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (781)
Q Consensus 438 H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f 517 (781)
|++.+....... .....|.+.. ..+..+++.+|.||++|....+.+.+. | .|++
T Consensus 114 h~~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~ad~vi~~S~~~~~~~~~~---~---------------~~~~-- 167 (388)
T TIGR02149 114 HSLEPLRPWKEE----QLGGGYKLSS--WAEKTAIEAADRVIAVSGGMREDILKY---Y---------------PDLD-- 167 (388)
T ss_pred eccccccccccc----ccccchhHHH--HHHHHHHhhCCEEEEccHHHHHHHHHH---c---------------CCCC--
Confidence 987543211000 0111122211 235678899999999998765532211 0 1222
Q ss_pred CCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHh
Q 003987 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (781)
Q Consensus 518 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l 597 (781)
..++.+||||+|.+.|.|......+ .++|+ ++++++|+++||+.+.||++.|++|++++
T Consensus 168 ~~~i~vi~ng~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~Grl~~~Kg~~~li~a~~~l 226 (388)
T TIGR02149 168 PEKVHVIYNGIDTKEYKPDDGNVVL-------------------DRYGI--DRSRPYILFVGRITRQKGVPHLLDAVHYI 226 (388)
T ss_pred cceEEEecCCCChhhcCCCchHHHH-------------------HHhCC--CCCceEEEEEcccccccCHHHHHHHHHHH
Confidence 5689999999999888765432221 23555 56788999999999999999999999987
Q ss_pred hccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC-CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCC
Q 003987 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL-DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 676 (781)
Q Consensus 598 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL-~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E 676 (781)
. ++++++++|+|++ ..+..+.+++.+.+++. .++|.|++ +.++.+++..+++. +|++|+||.+|
T Consensus 227 ~---~~~~l~i~g~g~~--------~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~~~~~~-aDv~v~ps~~e 291 (388)
T TIGR02149 227 P---KDVQVVLCAGAPD--------TPEVAEEVRQAVALLDRNRTGIIWIN---KMLPKEELVELLSN-AEVFVCPSIYE 291 (388)
T ss_pred h---hcCcEEEEeCCCC--------cHHHHHHHHHHHHHhccccCceEEec---CCCCHHHHHHHHHh-CCEEEeCCccC
Confidence 5 4689999998865 11234567777777765 34588765 25778899999995 99999999999
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCH------HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 003987 677 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP------DQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (781)
Q Consensus 677 ~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~------~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~ 750 (781)
+||++++|||+||+|||+|+.||..|++.++.+|++++++|+ ++++++|.+++ +|++.+++|++++++.+
T Consensus 292 ~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~ 367 (388)
T TIGR02149 292 PLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILL----ADPELAKKMGIAGRKRA 367 (388)
T ss_pred CCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998 88999998777 89999999999999999
Q ss_pred HHhcCcchhhhccchHHHH
Q 003987 751 YERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 751 ~~~ysw~~~~il~~ye~ll 769 (781)
.++|||+.+ ++.|.+++
T Consensus 368 ~~~~s~~~~--~~~~~~~y 384 (388)
T TIGR02149 368 EEEFSWGSI--AKKTVEMY 384 (388)
T ss_pred HHhCCHHHH--HHHHHHHH
Confidence 999999765 34444444
No 17
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=9.3e-39 Score=366.08 Aligned_cols=433 Identities=17% Similarity=0.132 Sum_probs=288.7
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCc--cee---
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQ--RLE--- 354 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~--~~e--- 354 (781)
||++||+-.+|- ..+||...++. .|+++|++.||+|. |+|+.++......... ...
T Consensus 1 ~Il~v~~E~~p~-------~k~GGl~~~~~--------~L~~aL~~~G~~V~----Vi~p~y~~~~~~~~~~~~~~~~~~ 61 (476)
T cd03791 1 KVLFVASEVAPF-------AKTGGLGDVVG--------ALPKALAKLGHDVR----VIMPKYGRILDELRGQLLVLRLFG 61 (476)
T ss_pred CEEEEEcccccc-------ccCCcHHHHHH--------HHHHHHHHCCCeEE----EEecCCcchhhHhccCeEEEEEEe
Confidence 699999877642 36899999999 67777899999999 9998766532110000 000
Q ss_pred ------------eecCCCCeEEEEeccCCCcc--cc--cccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc
Q 003987 355 ------------RVSGTEHTHILRVPFRSEKG--IL--RQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG 418 (781)
Q Consensus 355 ------------~v~~~~~~~I~rvp~~~~~~--~~--~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~ 418 (781)
......++.+++++...... .. ..+....+-......|...+...+.. +..+|||||+|.+.+
T Consensus 62 ~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~-~~~~pDviH~hd~~t 140 (476)
T cd03791 62 VPVGGRPEYVGVFELPVDGVPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRR-LGWKPDIIHCHDWHT 140 (476)
T ss_pred eccCCceeEEEEEEEEeCCceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHh-cCCCCcEEEECchHH
Confidence 00112357777775433211 00 00000011111122344444444443 257999999999999
Q ss_pred hHHHHHHHHHc------CCcEEEEecCCcccCCCCChhhHhh--------hhccccchhhhhHHHHHHhhCCEEEecCHH
Q 003987 419 NLVASLLAYKM------GITQCTIAHALEKTKYPDSDIYWKK--------FDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (781)
Q Consensus 419 ~lva~llar~~------gvp~v~t~H~l~~~k~~~s~~~~k~--------~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (781)
++++.++++.. ++|+|+|+|++.............. ....+.+...+..+..++..||.|+++|..
T Consensus 141 ~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~ 220 (476)
T cd03791 141 GLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPT 220 (476)
T ss_pred HHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCHh
Confidence 88888888774 8999999999865442211111100 001112223445677889999999999987
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccccc
Q 003987 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (781)
Q Consensus 485 ~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~ 564 (781)
.++.+.+... +..+.++ +.....|+.+|+||+|.+.|.|..+......-.....+.....+...++++
T Consensus 221 ~~~~i~~~~~------~~gl~~~------~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~ 288 (476)
T cd03791 221 YAREILTPEF------GEGLDGL------LRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEEL 288 (476)
T ss_pred HHHHhCCCCC------CcchHHH------HHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHHc
Confidence 7653322100 0001000 111257999999999999998764432110000000001111122234567
Q ss_pred CCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003987 565 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (781)
Q Consensus 565 g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~ 644 (781)
|++.++++++|+++||+.+.||++.+++++.++.+. +++|+|+|+|.. ...+.++++++++ .++|.
T Consensus 289 g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~----------~~~~~~~~~~~~~--~~~v~ 354 (476)
T cd03791 289 GLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLEL--GGQLVILGSGDP----------EYEEALRELAARY--PGRVA 354 (476)
T ss_pred CCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHc--CcEEEEEecCCH----------HHHHHHHHHHHhC--CCcEE
Confidence 775457899999999999999999999999998764 499999999854 3456777777776 56788
Q ss_pred EeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCC------eEEEECCCCH
Q 003987 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGA------SGFHIDPYHP 718 (781)
Q Consensus 645 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~------~G~lv~p~d~ 718 (781)
+++ ..+.+++..+++ .+|++++||.+|+||++++|||+||+|||+|+.||..|+|.++. +|+++++.|+
T Consensus 355 ~~~----~~~~~~~~~~~~-~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~ 429 (476)
T cd03791 355 VLI----GYDEALAHLIYA-GADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNA 429 (476)
T ss_pred EEE----eCCHHHHHHHHH-hCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCH
Confidence 766 344556677888 49999999999999999999999999999999999999999988 9999999999
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 719 ~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
++++++|.++++ ...+++.|.++++++++ +.|||+.+ ++.|.+++
T Consensus 430 ~~l~~~i~~~l~-~~~~~~~~~~~~~~~~~---~~fsw~~~--a~~~~~~y 474 (476)
T cd03791 430 DALLAALRRALA-LYRDPEAWRKLQRNAMA---QDFSWDRS--AKEYLELY 474 (476)
T ss_pred HHHHHHHHHHHH-HHcCHHHHHHHHHHHhc---cCCChHHH--HHHHHHHH
Confidence 999999998863 33568899999888765 57999664 46666665
No 18
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=6.8e-39 Score=366.88 Aligned_cols=376 Identities=15% Similarity=0.189 Sum_probs=266.2
Q ss_pred CceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeee
Q 003987 277 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (781)
Q Consensus 277 ~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v 356 (781)
+.|||++++ +..| .+..||++.++. +|+++|.++||+|+ |+|...... +.
T Consensus 57 ~~mrI~~~~-~~~~-------~~~~gG~~~~~~--------~l~~~L~~~G~eV~----vlt~~~~~~---------~~- 106 (465)
T PLN02871 57 RPRRIALFV-EPSP-------FSYVSGYKNRFQ--------NFIRYLREMGDEVL----VVTTDEGVP---------QE- 106 (465)
T ss_pred CCceEEEEE-CCcC-------CcccccHHHHHH--------HHHHHHHHCCCeEE----EEecCCCCC---------cc-
Confidence 357999997 3332 246799999999 77778899999999 998653211 00
Q ss_pred cCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEE
Q 003987 357 SGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCT 435 (781)
Q Consensus 357 ~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~-~lva~llar~~gvp~v~ 435 (781)
..++.+++++.... + +..... +.+ .+...+.+.+.+ .+|||||+|.+.. .+.+.++++..++|+|+
T Consensus 107 --~~g~~v~~~~~~~~-~----~~~~~~-~~~--~~~~~l~~~i~~---~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~ 173 (465)
T PLN02871 107 --FHGAKVIGSWSFPC-P----FYQKVP-LSL--ALSPRIISEVAR---FKPDLIHASSPGIMVFGALFYAKLLCVPLVM 173 (465)
T ss_pred --ccCceeeccCCcCC-c----cCCCce-eec--cCCHHHHHHHHh---CCCCEEEECCCchhHHHHHHHHHHhCCCEEE
Confidence 11344443322111 0 000000 000 011123333433 3899999998654 45566678889999999
Q ss_pred EecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCC
Q 003987 436 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 515 (781)
Q Consensus 436 t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~ 515 (781)
+.|+............+ + ++.. +......++.+|.|+++|....+.+.+. |.
T Consensus 174 ~~h~~~~~~~~~~~~~~--~---~~~~--~~~~r~~~~~ad~ii~~S~~~~~~l~~~--------------------~~- 225 (465)
T PLN02871 174 SYHTHVPVYIPRYTFSW--L---VKPM--WDIIRFLHRAADLTLVTSPALGKELEAA--------------------GV- 225 (465)
T ss_pred EEecCchhhhhcccchh--h---HHHH--HHHHHHHHhhCCEEEECCHHHHHHHHHc--------------------CC-
Confidence 99976432211111001 0 0000 1123457789999999998775522111 11
Q ss_pred CCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHH
Q 003987 516 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYG 595 (781)
Q Consensus 516 ~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~ 595 (781)
....++.+||||+|.+.|.|........ .++... .+++++|+|+||+.+.||++.++++++
T Consensus 226 ~~~~kv~vi~nGvd~~~f~p~~~~~~~~------------------~~~~~~-~~~~~~i~~vGrl~~~K~~~~li~a~~ 286 (465)
T PLN02871 226 TAANRIRVWNKGVDSESFHPRFRSEEMR------------------ARLSGG-EPEKPLIVYVGRLGAEKNLDFLKRVME 286 (465)
T ss_pred CCcCeEEEeCCccCccccCCccccHHHH------------------HHhcCC-CCCCeEEEEeCCCchhhhHHHHHHHHH
Confidence 1156899999999999887754322111 112111 346789999999999999999999998
Q ss_pred HhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCC
Q 003987 596 KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY 675 (781)
Q Consensus 596 ~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~ 675 (781)
++ ++++|+|+|+|+. .+.+++++++ .+|.|+| .++.+++..+|+. +|++|+||..
T Consensus 287 ~~----~~~~l~ivG~G~~------------~~~l~~~~~~----~~V~f~G----~v~~~ev~~~~~~-aDv~V~pS~~ 341 (465)
T PLN02871 287 RL----PGARLAFVGDGPY------------REELEKMFAG----TPTVFTG----MLQGDELSQAYAS-GDVFVMPSES 341 (465)
T ss_pred hC----CCcEEEEEeCChH------------HHHHHHHhcc----CCeEEec----cCCHHHHHHHHHH-CCEEEECCcc
Confidence 76 4799999999865 4566666653 3699999 5667899999995 9999999999
Q ss_pred CCCcHHHHHHHHcCCcEEEcCcccccccccc---CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH
Q 003987 676 EAFGLTVVEAMTCGLPTFATCHGGPAEIIEH---GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (781)
Q Consensus 676 E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d---g~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~ 752 (781)
|+||++++|||+||+|||+|+.||..|++.+ +++|++++|+|+++++++|.+++ +|++.+++|++++++++ +
T Consensus 342 E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~-~ 416 (465)
T PLN02871 342 ETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLL----ADPELRERMGAAAREEV-E 416 (465)
T ss_pred cccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-H
Confidence 9999999999999999999999999999999 99999999999999999998887 89999999999999988 6
Q ss_pred hcCcchh--hhcc-chHHHHHhc
Q 003987 753 RLVVSSD--GIVD-PSPFVINVI 772 (781)
Q Consensus 753 ~ysw~~~--~il~-~ye~ll~~~ 772 (781)
+|||+.+ .+.+ .|++++..+
T Consensus 417 ~fsw~~~a~~l~~~~Y~~~~~~~ 439 (465)
T PLN02871 417 KWDWRAATRKLRNEQYSAAIWFW 439 (465)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHH
Confidence 8999987 6666 688887643
No 19
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=2.1e-38 Score=356.86 Aligned_cols=280 Identities=16% Similarity=0.229 Sum_probs=226.1
Q ss_pred CCCceEEEEcCCCchHHHHHHHH--HcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecC
Q 003987 405 QGFPDFIIGNYSDGNLVASLLAY--KMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 482 (781)
Q Consensus 405 ~~kpDIIh~~~~~~~lva~llar--~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 482 (781)
+.+||+||+|++..+..+..+++ ..+.+.++|+|+....... ....|+ ......++++|+|+++|
T Consensus 116 ~~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~--------~~~~~~-----~~~~~~~~~ad~vv~~S 182 (406)
T PRK15427 116 PFVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSRE--------VLNHYT-----PEYQQLFRRGDLMLPIS 182 (406)
T ss_pred cCCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccch--------hhhhhh-----HHHHHHHHhCCEEEECC
Confidence 45899999999887777777766 3455778999975332110 001111 01224678999999999
Q ss_pred HHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccc
Q 003987 483 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (781)
Q Consensus 483 ~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~ 562 (781)
....+.+.+ .|++ ..|+.+||||+|.+.|.+....
T Consensus 183 ~~~~~~l~~--------------------~g~~--~~ki~vi~nGvd~~~f~~~~~~----------------------- 217 (406)
T PRK15427 183 DLWAGRLQK--------------------MGCP--PEKIAVSRMGVDMTRFSPRPVK----------------------- 217 (406)
T ss_pred HHHHHHHHH--------------------cCCC--HHHEEEcCCCCCHHHcCCCccc-----------------------
Confidence 876552211 1333 6789999999999887653210
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003987 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~ 642 (781)
...++..|+++||+.+.||++.+++|++++++..++++|+|+|+|+. .++++++++++++.++
T Consensus 218 -----~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~------------~~~l~~~~~~~~l~~~ 280 (406)
T PRK15427 218 -----APATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPW------------ERRLRTLIEQYQLEDV 280 (406)
T ss_pred -----cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECchh------------HHHHHHHHHHcCCCCe
Confidence 02345679999999999999999999999988788999999999976 6789999999999999
Q ss_pred EEEeccccCcCChHHHHHHHHccCcEEEEcCCC------CCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCC
Q 003987 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFY------EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY 716 (781)
Q Consensus 643 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~------E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~ 716 (781)
|.|+| .++.+++..+++. +|+||+||.. ||||++++|||+||+|||+|+.||..|+|.++.+|++++++
T Consensus 281 V~~~G----~~~~~el~~~l~~-aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~ 355 (406)
T PRK15427 281 VEMPG----FKPSHEVKAMLDD-ADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPEN 355 (406)
T ss_pred EEEeC----CCCHHHHHHHHHh-CCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCC
Confidence 99999 6678899999995 9999999974 99999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhccC-CHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 717 HPDQAAELMADFFGKCKE-NPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 717 d~~~lA~~I~~~l~~l~~-dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
|+++++++|.+++ + ||+.+++|+++|++++.++|+|+. +.+.+.+++.
T Consensus 356 d~~~la~ai~~l~----~~d~~~~~~~~~~ar~~v~~~f~~~~--~~~~l~~~~~ 404 (406)
T PRK15427 356 DAQALAQRLAAFS----QLDTDELAPVVKRAREKVETDFNQQV--INRELASLLQ 404 (406)
T ss_pred CHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHHhcCHHH--HHHHHHHHHh
Confidence 9999999998887 7 999999999999999999999965 4455555553
No 20
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=3.9e-38 Score=346.48 Aligned_cols=365 Identities=19% Similarity=0.291 Sum_probs=264.9
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecC
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~ 358 (781)
|||++++. |..||.++++. +|++.|.++||+|+ |+|...+.... ..
T Consensus 1 mki~~~~~------------p~~gG~~~~~~--------~la~~L~~~G~~v~----v~~~~~~~~~~----------~~ 46 (371)
T cd04962 1 MKIGIVCY------------PTYGGSGVVAT--------ELGKALARRGHEVH----FITSSRPFRLD----------EY 46 (371)
T ss_pred CceeEEEE------------eCCCCccchHH--------HHHHHHHhcCCceE----EEecCCCcchh----------hh
Confidence 69999972 44699999999 77778899999999 99875332100 01
Q ss_pred CCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH----cCCcEE
Q 003987 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK----MGITQC 434 (781)
Q Consensus 359 ~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~----~gvp~v 434 (781)
.++..+..++..... ......+.......+.+.+. ..+||+||+|++.+...+.+++++ .++|++
T Consensus 47 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~~i~---~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i 115 (371)
T cd04962 47 SPNIFFHEVEVPQYP--------LFQYPPYDLALASKIAEVAK---RYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVV 115 (371)
T ss_pred ccCeEEEEecccccc--------hhhcchhHHHHHHHHHHHHh---cCCccEEeecccCCccHHHHHHHHhcCcCCCcEE
Confidence 112333333322110 00111121222333344443 349999999987664444444432 279999
Q ss_pred EEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccC
Q 003987 435 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGI 514 (781)
Q Consensus 435 ~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi 514 (781)
++.|+....... ....+. .....+++.+|.|+++|....+.+.+. +
T Consensus 116 ~~~h~~~~~~~~--------~~~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~--------------------~- 161 (371)
T cd04962 116 TTLHGTDITLVG--------QDPSFQ-----PATRFSIEKSDGVTAVSESLRQETYEL--------------------F- 161 (371)
T ss_pred EEEcCCcccccc--------ccccch-----HHHHHHHhhCCEEEEcCHHHHHHHHHh--------------------c-
Confidence 999975322110 011111 123457889999999998765422111 0
Q ss_pred CCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHH
Q 003987 515 DVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECY 594 (781)
Q Consensus 515 ~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~ 594 (781)
....++.+||||+|...|.+......+ ..++. .+++++++++||+.+.||++.+++++
T Consensus 162 -~~~~~i~vi~n~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~il~~g~l~~~K~~~~li~a~ 219 (371)
T cd04962 162 -DITKEIEVIPNFVDEDRFRPKPDEALK-------------------RRLGA--PEGEKVLIHISNFRPVKRIDDVIRIF 219 (371)
T ss_pred -CCcCCEEEecCCcCHhhcCCCchHHHH-------------------HhcCC--CCCCeEEEEecccccccCHHHHHHHH
Confidence 125689999999998877654432211 22444 45778899999999999999999999
Q ss_pred HHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC
Q 003987 595 GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF 674 (781)
Q Consensus 595 ~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~ 674 (781)
.++.+. .+++|+++|+|++ .+.++++++++++.++|.|+|.+ +++..+++. +|++|+||.
T Consensus 220 ~~l~~~-~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-~d~~v~ps~ 279 (371)
T cd04962 220 AKVRKE-VPARLLLVGDGPE------------RSPAERLARELGLQDDVLFLGKQ------DHVEELLSI-ADLFLLPSE 279 (371)
T ss_pred HHHHhc-CCceEEEEcCCcC------------HHHHHHHHHHcCCCceEEEecCc------ccHHHHHHh-cCEEEeCCC
Confidence 998765 4699999999976 56788889999999999999943 357888885 999999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc
Q 003987 675 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERL 754 (781)
Q Consensus 675 ~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~y 754 (781)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ .||+.+.+|++++++.+.++|
T Consensus 280 ~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~f 355 (371)
T cd04962 280 KESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLL----EDDELWQEFSRAARNRAAERF 355 (371)
T ss_pred cCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999998877 899999999999999998999
Q ss_pred CcchhhhccchHHHHH
Q 003987 755 VVSSDGIVDPSPFVIN 770 (781)
Q Consensus 755 sw~~~~il~~ye~ll~ 770 (781)
||+. +++.|.+++.
T Consensus 356 s~~~--~~~~~~~~y~ 369 (371)
T cd04962 356 DSER--IVPQYEALYR 369 (371)
T ss_pred CHHH--HHHHHHHHHH
Confidence 9965 5566666654
No 21
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=2e-38 Score=364.02 Aligned_cols=429 Identities=15% Similarity=0.161 Sum_probs=276.1
Q ss_pred ceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCc--ceee
Q 003987 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQ--RLER 355 (781)
Q Consensus 278 ~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~--~~e~ 355 (781)
.|||++||.-..| .-.+||..-++- .|.++|+++||+|. |+++.+..-... ... ....
T Consensus 3 ~~~il~v~~E~~p-------~~k~ggl~dv~~--------~lp~~l~~~g~~v~----v~~P~y~~~~~~-~~~~~~~~~ 62 (485)
T PRK14099 3 PLRVLSVASEIFP-------LIKTGGLADVAG--------ALPAALKAHGVEVR----TLVPGYPAVLAG-IEDAEQVHS 62 (485)
T ss_pred CcEEEEEEecccc-------ccCCCcHHHHHH--------HHHHHHHHCCCcEE----EEeCCCcchhhh-hcCceEEEE
Confidence 4899999987765 357899887777 66777899999999 998876543111 110 1111
Q ss_pred ec---C---------CCCeEEEEeccCCCcccccccccccC-ch---------hhHHH---HHHHHHHHHHHH-cCCCce
Q 003987 356 VS---G---------TEHTHILRVPFRSEKGILRQWISRFD-VW---------PYLET---FTEDVGSEITAE-LQGFPD 409 (781)
Q Consensus 356 v~---~---------~~~~~I~rvp~~~~~~~~~~~isr~~-i~---------~yl~~---f~~~~~~~i~~~-~~~kpD 409 (781)
.. + .+++.++-+... .+..|.. ++ .-.++ |+..+...+... ...+||
T Consensus 63 ~~~~~~~~~~~~~~~~~~v~~~~~~~~-------~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pD 135 (485)
T PRK14099 63 FPDLFGGPARLLAARAGGLDLFVLDAP-------HLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPD 135 (485)
T ss_pred EeeeCCceEEEEEEEeCCceEEEEeCh-------HhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCC
Confidence 11 1 012333322111 1111111 11 11223 333232222221 145899
Q ss_pred EEEEcCCCchHHHHHHHHH--cCCcEEEEecCCcccCCCCChh------hHhhhh-ccccchhhhhHHHHHHhhCCEEEe
Q 003987 410 FIIGNYSDGNLVASLLAYK--MGITQCTIAHALEKTKYPDSDI------YWKKFD-EKYHFSCQFTADLIAMNNADFIIT 480 (781)
Q Consensus 410 IIh~~~~~~~lva~llar~--~gvp~v~t~H~l~~~k~~~s~~------~~k~~~-~~y~f~~~~~~e~~a~~~AD~IIt 480 (781)
|||+|.|.+++++.++... .++|.|+|+|++.......... .+..+. ....+.......+.++..||.|+|
T Consensus 136 IiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vit 215 (485)
T PRK14099 136 IVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITT 215 (485)
T ss_pred EEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeee
Confidence 9999999999888777642 4689999999986543211111 011000 000111111234568899999999
Q ss_pred cCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccc
Q 003987 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (781)
Q Consensus 481 ~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 560 (781)
+|+..+..+.+.. ..+.+++.+ .....|+.+|+||+|.+.|.|.++.......-...++....+....
T Consensus 216 VS~~~a~ei~~~~------~g~gl~~~l------~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l 283 (485)
T PRK14099 216 VSPTYALEIQGPE------AGMGLDGLL------RQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAAL 283 (485)
T ss_pred cChhHHHHHhccc------CCcChHHHH------HhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHH
Confidence 9988765332210 001111111 1125689999999999999886542100000000000000011223
Q ss_pred ccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003987 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (781)
Q Consensus 561 ~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~ 640 (781)
++++|+..+++.++|+++||+.++||++.|++|+.++.+ .+++|+|+|+|+. ...+.+++++++++
T Consensus 284 ~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~~~~lvivG~G~~----------~~~~~l~~l~~~~~-- 349 (485)
T PRK14099 284 QARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLG--EGAQLALLGSGDA----------ELEARFRAAAQAYP-- 349 (485)
T ss_pred HHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHh--cCcEEEEEecCCH----------HHHHHHHHHHHHCC--
Confidence 456788545578899999999999999999999998865 3699999999854 34567788888764
Q ss_pred CcE-EEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC---------CeE
Q 003987 641 GQF-RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG---------ASG 710 (781)
Q Consensus 641 ~~V-~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg---------~~G 710 (781)
+++ .|+|+ .+++..+|..++|+||+||.+|+||++++|||+||+|+|+|++||+.|+|.++ .+|
T Consensus 350 ~~v~~~~G~------~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G 423 (485)
T PRK14099 350 GQIGVVIGY------DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATG 423 (485)
T ss_pred CCEEEEeCC------CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCce
Confidence 455 78884 45788877435999999999999999999999999999999999999999876 689
Q ss_pred EEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh--hhccchHHHH
Q 003987 711 FHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD--GIVDPSPFVI 769 (781)
Q Consensus 711 ~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~--~il~~ye~ll 769 (781)
++++|+|+++++++|.+++. +..|++.|++|+++++ .++|||+++ .+.+.|++++
T Consensus 424 ~l~~~~d~~~La~ai~~a~~-l~~d~~~~~~l~~~~~---~~~fSw~~~a~~y~~lY~~l~ 480 (485)
T PRK14099 424 VQFSPVTADALAAALRKTAA-LFADPVAWRRLQRNGM---TTDVSWRNPAQHYAALYRSLV 480 (485)
T ss_pred EEeCCCCHHHHHHHHHHHHH-HhcCHHHHHHHHHHhh---hhcCChHHHHHHHHHHHHHHH
Confidence 99999999999999987532 3379999999999986 378999876 4444455444
No 22
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=3e-37 Score=344.48 Aligned_cols=375 Identities=15% Similarity=0.174 Sum_probs=272.1
Q ss_pred CceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeee
Q 003987 277 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (781)
Q Consensus 277 ~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v 356 (781)
|+-||+++..--+|-+ ....||+++++. +++++|+. +|+ |+|...+.-.. .+
T Consensus 1 ~~~~~~~~~~~~~~~p-----~~~~g~ve~~~~--------~~~~~l~~---~~~----~~~~~~~~~~~------~~-- 52 (380)
T PRK15484 1 MIDKIIFTVTPIFSIP-----PRGAAAVETWIY--------QVAKRTSI---PNR----IACIKNPGYPE------YT-- 52 (380)
T ss_pred CCceEEEEeccCCCCC-----CccccHHHHHHH--------HhhhhccC---Cee----EEEecCCCCCc------hh--
Confidence 6778988877666643 234799999999 66667743 999 99988653110 00
Q ss_pred cCCCCeEEEEeccCCCcc-cccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEE
Q 003987 357 SGTEHTHILRVPFRSEKG-ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCT 435 (781)
Q Consensus 357 ~~~~~~~I~rvp~~~~~~-~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~ 435 (781)
...+|+.|+++++....+ ...+|.+. ..+ .|...+...+......++||||+|... .+...+..+..+++++.
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~vi~v~~~~-~~~~~~~~~~~~~~~v~ 126 (380)
T PRK15484 53 KVNDNCDIHYIGFSRIYKRLFQKWTRL-DPL----PYSQRILNIAHKFTITKDSVIVIHNSM-KLYRQIRERAPQAKLVM 126 (380)
T ss_pred hccCCCceEEEEeccccchhhhhhhcc-Cch----hHHHHHHHHHHhcCCCCCcEEEEeCcH-HhHHHHHhhCCCCCEEE
Confidence 112357788887754321 12233322 222 233334444433323579999999754 34444555556789999
Q ss_pred EecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCC
Q 003987 436 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 515 (781)
Q Consensus 436 t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~ 515 (781)
+.|..... ..++.++.||++|....+...+ +.
T Consensus 127 ~~h~~~~~--------------------------~~~~~~~~ii~~S~~~~~~~~~---------------------~~- 158 (380)
T PRK15484 127 HMHNAFEP--------------------------ELLDKNAKIIVPSQFLKKFYEE---------------------RL- 158 (380)
T ss_pred EEecccCh--------------------------hHhccCCEEEEcCHHHHHHHHh---------------------hC-
Confidence 99953210 1234678999999876542110 11
Q ss_pred CCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHH
Q 003987 516 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYG 595 (781)
Q Consensus 516 ~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~ 595 (781)
...++.+||||+|.+.|.+......+ +++|+ ++++++|+|+||+.+.||++.|++|++
T Consensus 159 -~~~~i~vIpngvd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 159 -PNADISIVPNGFCLETYQSNPQPNLR-------------------QQLNI--SPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred -CCCCEEEecCCCCHHHcCCcchHHHH-------------------HHhCC--CCCCeEEEEeccCccccCHHHHHHHHH
Confidence 15689999999999888764432211 23555 456788999999999999999999999
Q ss_pred HhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCC
Q 003987 596 KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY 675 (781)
Q Consensus 596 ~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~ 675 (781)
++.+..|+++|+|+|+++.. .+.+...+.+.+++++++++ .+|.|+| .++.+++..+|+. +|++|+||.+
T Consensus 217 ~l~~~~p~~~lvivG~g~~~---~~~~~~~~~~~l~~~~~~l~--~~v~~~G----~~~~~~l~~~~~~-aDv~v~pS~~ 286 (380)
T PRK15484 217 KLATAHSNLKLVVVGDPTAS---SKGEKAAYQKKVLEAAKRIG--DRCIMLG----GQPPEKMHNYYPL-ADLVVVPSQV 286 (380)
T ss_pred HHHHhCCCeEEEEEeCCccc---cccchhHHHHHHHHHHHhcC--CcEEEeC----CCCHHHHHHHHHh-CCEEEeCCCC
Confidence 99888899999999998652 11123345667777887775 5799999 6677899999995 9999999974
Q ss_pred -CCCcHHHHHHHHcCCcEEEcCccccccccccCCeEE-EECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHh
Q 003987 676 -EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGF-HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYER 753 (781)
Q Consensus 676 -E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~-lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ 753 (781)
|+||++++|||+||+|||+|+.||..|++.++.+|+ +++|.|+++++++|.+++ +|++. .+++++|++.+.++
T Consensus 287 ~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll----~d~~~-~~~~~~ar~~~~~~ 361 (380)
T PRK15484 287 EEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTL----ADPEL-TQIAEQAKDFVFSK 361 (380)
T ss_pred ccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHH----cCHHH-HHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999 568999999999998887 78875 78999999999999
Q ss_pred cCcchhhhccchHHHHHhc
Q 003987 754 LVVSSDGIVDPSPFVINVI 772 (781)
Q Consensus 754 ysw~~~~il~~ye~ll~~~ 772 (781)
|||+. +++.|++++..+
T Consensus 362 fsw~~--~a~~~~~~l~~~ 378 (380)
T PRK15484 362 YSWEG--VTQRFEEQIHNW 378 (380)
T ss_pred CCHHH--HHHHHHHHHHHh
Confidence 99965 556777777543
No 23
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=3.9e-37 Score=342.11 Aligned_cols=382 Identities=19% Similarity=0.247 Sum_probs=260.3
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecC
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~ 358 (781)
|||+++.|... .||.++++. +|+++|+++||+|+ |+|...+... +. .+...+
T Consensus 1 mkIl~~~~~~~-----------~gG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~---~~--~~~~~~ 52 (392)
T cd03805 1 LRVAFIHPDLG-----------IGGAERLVV--------DAALALQSRGHEVT----IYTSHHDPSH---CF--EETKDG 52 (392)
T ss_pred CeEEEECCCCC-----------CchHHHHHH--------HHHHHHHhCCCeEE----EEcCCCCchh---cc--hhccCC
Confidence 79999986543 589999999 77777899999999 9986532110 00 011111
Q ss_pred CCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHH--HHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEE
Q 003987 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEIT--AELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTI 436 (781)
Q Consensus 359 ~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~--~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t 436 (781)
++.+...+.....++ .++ ...+..+.......+. .....++|+||+|....+..+ +....+.|++++
T Consensus 53 --~~~i~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~--~~~~~~~~~i~~ 121 (392)
T cd03805 53 --TLPVRVRGDWLPRSI----FGR---FHILCAYLRMLYLALYLLLLPDEKYDVFIVDQVSACVPL--LKLFSPSKILFY 121 (392)
T ss_pred --eeEEEEEeEEEcchh----hHh---HHHHHHHHHHHHHHHHHHhcccCCCCEEEEcCcchHHHH--HHHhcCCcEEEE
Confidence 122222211100000 000 0011111111111111 112458999999875543322 233334899999
Q ss_pred ecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCC
Q 003987 437 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 516 (781)
Q Consensus 437 ~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~ 516 (781)
.|.............. ..|+... ...+..+++.+|.|+++|....+...+.. ....
T Consensus 122 ~h~~~~~~~~~~~~~~----~~~~~~~-~~~e~~~~~~ad~ii~~s~~~~~~~~~~~------------------~~~~- 177 (392)
T cd03805 122 CHFPDQLLAQRGSLLK----RLYRKPF-DWLEEFTTGMADKIVVNSNFTASVFKKTF------------------PSLA- 177 (392)
T ss_pred EecChHHhcCCCcHHH----HHHHHHH-HHHHHHHhhCceEEEEcChhHHHHHHHHh------------------cccc-
Confidence 9943211100011111 1111111 12466789999999999987654221110 0111
Q ss_pred CCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHH
Q 003987 517 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 596 (781)
Q Consensus 517 f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~ 596 (781)
..++.+|+||+|.+.|.+......+ +..+. .+++++|+++||+.+.||++.+++|+++
T Consensus 178 -~~~~~vi~n~vd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~grl~~~Kg~~~ll~a~~~ 235 (392)
T cd03805 178 -KNPREVVYPCVDTDSFESTSEDPDP-------------------GLLIP--KSGKKTFLSINRFERKKNIALAIEAFAI 235 (392)
T ss_pred -cCCcceeCCCcCHHHcCcccccccc-------------------ccccc--CCCceEEEEEeeecccCChHHHHHHHHH
Confidence 2344699999999877664322100 11222 4567899999999999999999999999
Q ss_pred hhccC---CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHH-cCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEc
Q 003987 597 NSQLR---ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT-YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQP 672 (781)
Q Consensus 597 l~~~~---~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~e-lgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~P 672 (781)
+.+.. ++++|+++|+++. ...++.++.+++++++++ +++.++|.|+| .++.+++..+++. +|++++|
T Consensus 236 l~~~~~~~~~~~l~i~G~~~~----~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g----~~~~~~~~~~l~~-ad~~l~~ 306 (392)
T cd03805 236 LKDKLAEFKNVRLVIAGGYDP----RVAENVEYLEELQRLAEELLLLEDQVIFLP----SISDSQKELLLSS-ARALLYT 306 (392)
T ss_pred HHhhcccccCeEEEEEcCCCC----CCchhHHHHHHHHHHHHHhcCCCceEEEeC----CCChHHHHHHHhh-CeEEEEC
Confidence 98776 7999999999865 122344567889999999 99999999999 6777899999995 9999999
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH
Q 003987 673 AFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (781)
Q Consensus 673 S~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~ 752 (781)
|..|+||++++|||+||+|||+|+.||..|++.++.+|+++++ |+++++++|.+++ .+++.+++++++|++++.+
T Consensus 307 s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~----~~~~~~~~~~~~a~~~~~~ 381 (392)
T cd03805 307 PSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLA----NDPDLADRMGAAGRKRVKE 381 (392)
T ss_pred CCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999986 9999999998887 8999999999999999999
Q ss_pred hcCcchh
Q 003987 753 RLVVSSD 759 (781)
Q Consensus 753 ~ysw~~~ 759 (781)
+|||+.+
T Consensus 382 ~~s~~~~ 388 (392)
T cd03805 382 KFSTEAF 388 (392)
T ss_pred hcCHHHH
Confidence 9999765
No 24
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=8.9e-37 Score=341.83 Aligned_cols=359 Identities=14% Similarity=0.182 Sum_probs=242.9
Q ss_pred HHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccccccCchhhHHHHH----
Q 003987 318 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFT---- 393 (781)
Q Consensus 318 eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~---- 393 (781)
+|+++|+++||+|+ ++|....... .+ ++++++++...... ...++|...+.
T Consensus 15 ~la~~L~~~G~~v~----~~~~~~~~~~-----------~~--~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 69 (396)
T cd03818 15 HLAPALAAQGHEVV----FLTEPNAAPP-----------PG--GVRVVRYRPPRGPT--------SGTHPYLREFEEAVL 69 (396)
T ss_pred HHHHHHHHCCCEEE----EEecCCCCCC-----------CC--CeeEEEecCCCCCC--------CCCCccchhHHHHHH
Confidence 67888999999999 9987743211 11 57888887553311 02222322221
Q ss_pred --HHHHHHHHH--HcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCcccCCCCC----hhhHhhhhccccchhh
Q 003987 394 --EDVGSEITA--ELQGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPDS----DIYWKKFDEKYHFSCQ 464 (781)
Q Consensus 394 --~~~~~~i~~--~~~~kpDIIh~~~~~~~lva~llar~-~gvp~v~t~H~l~~~k~~~s----~~~~k~~~~~y~f~~~ 464 (781)
..+.+.+.. ..+.+|||||+|...+. +..+++. .++|+|...|-+......+. ....+.. ...+....
T Consensus 70 ~~~~~~~~~~~~~~~~~~pdvi~~h~~~~~--~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 146 (396)
T cd03818 70 RGQAVARALLALRAKGFRPDVIVAHPGWGE--TLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLD-DALRLRNR 146 (396)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCccch--hhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchh-HHHHHHHh
Confidence 112222222 12458999999976542 2334444 46888876653222111000 0000000 00111111
Q ss_pred hhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHh
Q 003987 465 FTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLT 544 (781)
Q Consensus 465 ~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~ 544 (781)
.......++.||.+|++|....+... ..+..|+.|||||+|.+.|.|.........
T Consensus 147 ~~~~~~~~~~ad~vi~~s~~~~~~~~------------------------~~~~~ki~vI~ngvd~~~f~~~~~~~~~~~ 202 (396)
T cd03818 147 NALILLALAQADAGVSPTRWQRSTFP------------------------AELRSRISVIHDGIDTDRLRPDPQARLRLP 202 (396)
T ss_pred hhHhHHHHHhCCEEECCCHHHHhhCc------------------------HhhccceEEeCCCccccccCCCchhhhccc
Confidence 11234678999999999987755211 111468999999999999887653322110
Q ss_pred hhhcchhhhccCccccccccCCCCCCCCCEEEEEee-ccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHH
Q 003987 545 ALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMAR-LDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREE 623 (781)
Q Consensus 545 ~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGR-L~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee 623 (781)
...++ .+++++|+|+|| +.+.||++.+++|++++.+..++++|+|+|++... .....+.
T Consensus 203 -----------------~~~~~--~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~-~g~~~~~ 262 (396)
T cd03818 203 -----------------NGRVL--TPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVS-YGAPPPD 262 (396)
T ss_pred -----------------ccccC--CCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcc-cCCCCCC
Confidence 11122 456789999998 99999999999999999888899999999985320 0000000
Q ss_pred HHHHHHHHHHHHHcC---CCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccc
Q 003987 624 IAEIEKMHELMKTYK---LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP 700 (781)
Q Consensus 624 ~~~~~~l~~li~elg---L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~ 700 (781)
.+ ....+++++++ ..++|.|+| .++.+++..+|+. +|++|+||..|++|++++||||||+|||+|+.||.
T Consensus 263 ~~--~~~~~~~~~~~~~~~~~~V~f~G----~v~~~~~~~~l~~-adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~ 335 (396)
T cd03818 263 GE--SWKQHMLDELGGRLDLSRVHFLG----RVPYDQYLALLQV-SDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPV 335 (396)
T ss_pred cc--cHHHHHHHHhhcccCcceEEEeC----CCCHHHHHHHHHh-CcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCc
Confidence 00 01122233333 247899999 6778899999995 99999999999999999999999999999999999
Q ss_pred ccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 701 AEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 701 ~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
.|+|.++.+|++++++|+++++++|.+++ +|++.+++|+++|++++.++|||+.+
T Consensus 336 ~e~i~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~l~~~ar~~~~~~fs~~~~ 390 (396)
T cd03818 336 REVITDGENGLLVDFFDPDALAAAVIELL----DDPARRARLRRAARRTALRYDLLSVC 390 (396)
T ss_pred hhhcccCCceEEcCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhccHHHH
Confidence 99999999999999999999999998887 89999999999999999999999754
No 25
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=9.6e-37 Score=337.70 Aligned_cols=364 Identities=15% Similarity=0.189 Sum_probs=259.8
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+.+..+. ..||.+.++. +|++.|.+.|+++. |++....+ ........
T Consensus 3 ~il~ii~~~-----------~~GG~e~~~~--------~l~~~l~~~~~~~~----v~~~~~~~--------~~~~~~~~ 51 (374)
T TIGR03088 3 LIVHVVYRF-----------DVGGLENGLV--------NLINHLPADRYRHA----VVALTEVS--------AFRKRIQR 51 (374)
T ss_pred eEEEEeCCC-----------CCCcHHHHHH--------HHHhhccccccceE----EEEcCCCC--------hhHHHHHh
Confidence 678777543 3699999999 77777888999988 77643211 11110111
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE-EEEec
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ-CTIAH 438 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~-v~t~H 438 (781)
.++.+++++.... ..+ .+...+.+.+.+. +|||||+|...+ ..+.++++..++|. +.+.|
T Consensus 52 ~~i~~~~~~~~~~-----------~~~----~~~~~l~~~l~~~---~~Divh~~~~~~-~~~~~~~~~~~~~~~i~~~h 112 (374)
T TIGR03088 52 PDVAFYALHKQPG-----------KDV----AVYPQLYRLLRQL---RPDIVHTRNLAA-LEAQLPAALAGVPARIHGEH 112 (374)
T ss_pred cCceEEEeCCCCC-----------CCh----HHHHHHHHHHHHh---CCCEEEEcchhH-HHHHHHHHhcCCCeEEEeec
Confidence 2567777654321 011 1122344445444 899999997544 34455666778775 44555
Q ss_pred CCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003987 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~ 518 (781)
+....... ...| .|.+. .......+|.+|++|....+...+. .|++ .
T Consensus 113 ~~~~~~~~--~~~~-----~~~~~-----~~~~~~~~~~~i~vs~~~~~~~~~~-------------------~~~~--~ 159 (374)
T TIGR03088 113 GRDVFDLD--GSNW-----KYRWL-----RRLYRPLIHHYVAVSRDLEDWLRGP-------------------VKVP--P 159 (374)
T ss_pred Ccccccch--hhHH-----HHHHH-----HHHHHhcCCeEEEeCHHHHHHHHHh-------------------cCCC--h
Confidence 43211110 0011 12211 2234556899999998765522111 1222 5
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003987 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.+|+||+|.+.|.+.......... . ... ..++++|+++||+.+.||++.+++|+.++.
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~~~~~~~~----------------~-~~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~ 220 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRGDRSPILP----------------P-DFF--ADESVVVGTVGRLQAVKDQPTLVRAFALLV 220 (374)
T ss_pred hhEEEeccCccccccCCCccchhhhhH----------------h-hcC--CCCCeEEEEEecCCcccCHHHHHHHHHHHH
Confidence 789999999999888765322111100 0 111 356789999999999999999999999987
Q ss_pred ccCC----CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC
Q 003987 599 QLRE----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF 674 (781)
Q Consensus 599 ~~~~----~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~ 674 (781)
+..+ +++|+++|+|+. .+.++++++++++.++|.|+|.+ .++..+++. +|++|+||.
T Consensus 221 ~~~~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~pS~ 281 (374)
T TIGR03088 221 RQLPEGAERLRLVIVGDGPA------------RGACEQMVRAAGLAHLVWLPGER------DDVPALMQA-LDLFVLPSL 281 (374)
T ss_pred HhCcccccceEEEEecCCch------------HHHHHHHHHHcCCcceEEEcCCc------CCHHHHHHh-cCEEEeccc
Confidence 6544 689999999876 56788999999999999999943 367888885 999999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc
Q 003987 675 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERL 754 (781)
Q Consensus 675 ~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~y 754 (781)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ .|++.+++++++|++++.++|
T Consensus 282 ~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~~~~~~~f 357 (374)
T TIGR03088 282 AEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYV----SDPAARRAHGAAGRARAEQQF 357 (374)
T ss_pred cccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999998887 799999999999999999999
Q ss_pred CcchhhhccchHHHHH
Q 003987 755 VVSSDGIVDPSPFVIN 770 (781)
Q Consensus 755 sw~~~~il~~ye~ll~ 770 (781)
||+.+ ++.|++++.
T Consensus 358 s~~~~--~~~~~~~y~ 371 (374)
T TIGR03088 358 SINAM--VAAYAGLYD 371 (374)
T ss_pred CHHHH--HHHHHHHHH
Confidence 99764 455666654
No 26
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=4.9e-36 Score=327.07 Aligned_cols=347 Identities=19% Similarity=0.214 Sum_probs=260.8
Q ss_pred CcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCccccccc
Q 003987 300 DTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQW 379 (781)
Q Consensus 300 ~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~ 379 (781)
..||.++++. +|+++|+++||+|. |++...+. .... ...+++++++++...+
T Consensus 8 ~~gG~e~~~~--------~l~~~L~~~g~~v~----v~~~~~~~------~~~~----~~~~~~~~~~~~~~~~------ 59 (355)
T cd03819 8 ESGGVERGTL--------ELARALVERGHRSL----VASAGGRL------VAEL----EAEGSRHIKLPFISKN------ 59 (355)
T ss_pred ccCcHHHHHH--------HHHHHHHHcCCEEE----EEcCCCch------HHHH----HhcCCeEEEccccccc------
Confidence 3599999999 77778899999998 88754211 1111 1124566666654421
Q ss_pred ccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccc
Q 003987 380 ISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKY 459 (781)
Q Consensus 380 isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y 459 (781)
.+..+ .+...+.+.+.. .+||+||+|+....+.+.++++..++|++++.|+...... .
T Consensus 60 -----~~~~~-~~~~~l~~~~~~---~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~------------~- 117 (355)
T cd03819 60 -----PLRIL-LNVARLRRLIRE---EKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF------------R- 117 (355)
T ss_pred -----hhhhH-HHHHHHHHHHHH---cCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH------------H-
Confidence 11111 112233334433 4899999999887788888888899999999997643210 1
Q ss_pred cchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHH
Q 003987 460 HFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK 539 (781)
Q Consensus 460 ~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~ 539 (781)
....+..+|.++++|....+..++ ..|++ ..++.+||||+|...|.+....
T Consensus 118 --------~~~~~~~~~~vi~~s~~~~~~~~~-------------------~~~~~--~~k~~~i~ngi~~~~~~~~~~~ 168 (355)
T cd03819 118 --------YNAIMARGDRVIAVSNFIADHIRE-------------------NYGVD--PDRIRVIPRGVDLDRFDPGAVP 168 (355)
T ss_pred --------HHHHHHhcCEEEEeCHHHHHHHHH-------------------hcCCC--hhhEEEecCCccccccCccccc
Confidence 113467899999999876552211 11332 6799999999999887654322
Q ss_pred HHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCc
Q 003987 540 QKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSK 619 (781)
Q Consensus 540 ~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~ 619 (781)
...... .+++++. ++++++++++||+.+.||++.+++++.++++..++++|+|+|+++..
T Consensus 169 ~~~~~~--------------~~~~~~~--~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~~---- 228 (355)
T cd03819 169 PERILA--------------LAREWPL--PKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGR---- 228 (355)
T ss_pred hHHHHH--------------HHHHcCC--CCCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCccc----
Confidence 111100 0122343 45678999999999999999999999999887789999999998651
Q ss_pred chHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcC-CCCCCcHHHHHHHHcCCcEEEcCcc
Q 003987 620 DREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFATCHG 698 (781)
Q Consensus 620 d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS-~~E~fGltvlEAMa~GlPVVaT~~g 698 (781)
....+.+.+.++++++.++|.|+|+ .+++..+++. +|++++|| ..|+||++++|||+||+|||+|+.|
T Consensus 229 ----~~~~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~l~~-ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~ 297 (355)
T cd03819 229 ----RFYYAELLELIKRLGLQDRVTFVGH------CSDMPAAYAL-ADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG 297 (355)
T ss_pred ----chHHHHHHHHHHHcCCcceEEEcCC------cccHHHHHHh-CCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC
Confidence 1334556678888999899999995 3478899995 99999999 8999999999999999999999999
Q ss_pred ccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 699 GPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 699 G~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
|..|++.++.+|++++++|+++++++|..++. .+++.+++++++|++.+.++|||+.|
T Consensus 298 ~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~---~~~~~~~~~~~~a~~~~~~~f~~~~~ 355 (355)
T cd03819 298 GARETVRPGETGLLVPPGDAEALAQALDQILS---LLPEGRAKMFAKARMCVETLFSYDRM 355 (355)
T ss_pred CcHHHHhCCCceEEeCCCCHHHHHHHHHHHHh---hCHHHHHHHHHHHHHHHHHhhhhccC
Confidence 99999999999999999999999999975552 68999999999999999999999864
No 27
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=7.1e-36 Score=351.93 Aligned_cols=457 Identities=13% Similarity=0.176 Sum_probs=289.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCchhH-------HHHhhhcCCccccCCcHHHHHHHHHHHHHhhcCCCcccHhhhhcCC
Q 003987 203 ISRLQSSLSKAEDHLSKLPPDTPFSQF-------EYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRL 275 (781)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~gwg~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~r~ 275 (781)
.+.=..++++|.+..+.=. .-|.+. -.-+|.+|=|.---++--|+.-|-+++...-+-- +...+. -+
T Consensus 204 ~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~ 277 (694)
T PRK15179 204 LWRARDVLQAGLDAIGDGA--RKLTRRLVDLNADLAALRRLGVEGDGRDVPVSILVLEKMLQEIGRRR-NAEYDA---GP 277 (694)
T ss_pred HHHHHHHHHHHHHhhCcch--HHHHHHHHHHHHHHHHHHHcCcccccCCCceeeeeHHHHHHHHhhcC-cccccC---CC
Confidence 4445556666665554333 122222 2246777777655566677777777666544211 110110 01
Q ss_pred CCce-eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCC------------ceeecceEEEccCC
Q 003987 276 PMVF-NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGL------------DISPKILIVTRLIP 342 (781)
Q Consensus 276 p~~m-rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~Gh------------eV~~~v~VvT~~~p 342 (781)
.... ||+++.+.. ..||.+.+++ .|+.+|.++|. ++. |++....
T Consensus 278 ~~~~~rIl~vi~sl-----------~~GGAEr~~~--------~La~~l~~~~~~~~~~~g~g~~~~~~----V~~~~~~ 334 (694)
T PRK15179 278 ESFVGPVLMINGSL-----------GAGGAERQFV--------NTAVALQSAIQQGQSIAGYGVLGPVQ----VVCRSLR 334 (694)
T ss_pred CCCcceEEEEeCCC-----------CCCcHHHHHH--------HHHHHHHhcccCcccccCccCCCCcE----EEEEecc
Confidence 1234 899887544 3699999999 55666677744 233 3332111
Q ss_pred CCCCC-ccCcceeeecCCCCeEEEEeccCCCccccc--ccccccC----chh-hHHHHHHHHHHHHHHHcCCCceEEEEc
Q 003987 343 DAKGT-TCNQRLERVSGTEHTHILRVPFRSEKGILR--QWISRFD----VWP-YLETFTEDVGSEITAELQGFPDFIIGN 414 (781)
Q Consensus 343 ~~~~~-~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~--~~isr~~----i~~-yl~~f~~~~~~~i~~~~~~kpDIIh~~ 414 (781)
...+. .+...+. ..++.+..++.....+... .+..... ..| ........+.+.+++ .+|||||+|
T Consensus 335 ~~~g~~~~~~~L~----~~Gv~v~~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~---~kpDIVH~h 407 (694)
T PRK15179 335 SREGADFFAATLA----DAGIPVSVYSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRS---SVPSVVHIW 407 (694)
T ss_pred cccCcchHHHHHH----hCCCeEEEeccCCccCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHH---cCCcEEEEe
Confidence 11111 1111111 1246666665443211000 0000000 001 111223344444444 389999999
Q ss_pred CCCchHHHHHHHHHcCCcEEE-EecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccc
Q 003987 415 YSDGNLVASLLAYKMGITQCT-IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 493 (781)
Q Consensus 415 ~~~~~lva~llar~~gvp~v~-t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v 493 (781)
.+.+++++.++++..++|+|+ +.|++...... . .++ ..|.... ..+....++.+|++|......+.+
T Consensus 408 ~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~~--~-~~~---~~~~~l~----~~l~~~~~~i~Vs~S~~~~~~l~~-- 475 (694)
T PRK15179 408 QDGSIFACALAALLAGVPRIVLSVRTMPPVDRP--D-RYR---VEYDIIY----SELLKMRGVALSSNSQFAAHRYAD-- 475 (694)
T ss_pred CCcHHHHHHHHHHHcCCCEEEEEeCCCccccch--h-HHH---HHHHHHH----HHHHhcCCeEEEeCcHHHHHHHHH--
Confidence 999999999999999999876 55764322111 1 111 1111111 111222345566666654331111
Q ss_pred cccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCC
Q 003987 494 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKP 573 (781)
Q Consensus 494 ~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~ 573 (781)
..|++ ..|+.|||||+|.+.|.+.+........ +....+.+.+
T Consensus 476 -----------------~~g~~--~~kI~VI~NGVd~~~f~~~~~~~~~~~~------------------~~~~~~~~~~ 518 (694)
T PRK15179 476 -----------------WLGVD--ERRIPVVYNGLAPLKSVQDDACTAMMAQ------------------FDARTSDARF 518 (694)
T ss_pred -----------------HcCCC--hhHEEEECCCcCHHhcCCCchhhHHHHh------------------hccccCCCCe
Confidence 11333 6799999999998877654322211100 1111134567
Q ss_pred EEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcC
Q 003987 574 IVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRA 653 (781)
Q Consensus 574 iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v 653 (781)
+|+++||+.+.||++.+++|++++.+..|+++|+|+|+|+. .++++++++++++.++|+|+|++.
T Consensus 519 vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~~------------~~~L~~l~~~lgL~~~V~flG~~~--- 583 (694)
T PRK15179 519 TVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPL------------LESVREFAQRLGMGERILFTGLSR--- 583 (694)
T ss_pred EEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCcc------------hHHHHHHHHHcCCCCcEEEcCCcc---
Confidence 89999999999999999999999988889999999999976 678999999999999999999643
Q ss_pred ChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCH--HHHHHHHHHHHHh
Q 003987 654 RNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP--DQAAELMADFFGK 731 (781)
Q Consensus 654 ~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~--~~lA~~I~~~l~~ 731 (781)
++..+|+ .+|+||+||.+|+||++++|||+||+|||+|+.||+.|+|.++.+|++++++|. ++++++|.+++..
T Consensus 584 ---dv~~ll~-aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~ 659 (694)
T PRK15179 584 ---RVGYWLT-QFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDM 659 (694)
T ss_pred ---hHHHHHH-hcCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhC
Confidence 5778888 499999999999999999999999999999999999999999999999998874 6899999888854
Q ss_pred ccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 732 CKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 732 l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
+..+ ..+++++++++.++|||+. +++.|.+++
T Consensus 660 l~~~----~~l~~~ar~~a~~~FS~~~--~~~~~~~lY 691 (694)
T PRK15179 660 CAAD----PGIARKAADWASARFSLNQ--MIASTVRCY 691 (694)
T ss_pred hhcc----HHHHHHHHHHHHHhCCHHH--HHHHHHHHh
Confidence 4444 4567889999999999966 556666665
No 28
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=4.5e-36 Score=329.64 Aligned_cols=274 Identities=19% Similarity=0.290 Sum_probs=224.3
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHH
Q 003987 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (781)
Q Consensus 406 ~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (781)
.+||+||+|....++.+..++++.|+|++++.|+.......... ... .+.+ ........++.+|.|+++|...
T Consensus 81 ~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~----~~~-~~~~--~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 81 HRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLALL----LRS-RWAL--YARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred hCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccchhh----ccc-chhH--HHHHHHHHHHhcCEEEECCHHH
Confidence 48999999987777888888999999999999975432211100 000 0111 1123445788999999999877
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccC
Q 003987 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (781)
Q Consensus 486 ~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g 565 (781)
.+.+.+ .|++ ..++.++|||+|.+.|.+...
T Consensus 154 ~~~~~~--------------------~~~~--~~~i~vi~~g~d~~~~~~~~~--------------------------- 184 (367)
T cd05844 154 RDRLLA--------------------LGFP--PEKVHVHPIGVDTAKFTPATP--------------------------- 184 (367)
T ss_pred HHHHHH--------------------cCCC--HHHeEEecCCCCHHhcCCCCC---------------------------
Confidence 552111 1332 668999999999877654311
Q ss_pred CCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003987 566 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (781)
Q Consensus 566 ~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~f 645 (781)
..+++.++++|++.+.||++.+++|++.+.+..++++|+|+|+|+. .+.++++++++++.++|+|
T Consensus 185 ---~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~~------------~~~~~~~~~~~~~~~~v~~ 249 (367)
T cd05844 185 ---ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGPL------------LAALEALARALGLGGRVTF 249 (367)
T ss_pred ---CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCchH------------HHHHHHHHHHcCCCCeEEE
Confidence 2356789999999999999999999999988788999999999865 5678889999999999999
Q ss_pred eccccCcCChHHHHHHHHccCcEEEEcCC------CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHH
Q 003987 646 IAAQTNRARNGELYRYIADTKGAFVQPAF------YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPD 719 (781)
Q Consensus 646 lG~~~~~v~~~el~~~la~aadvfV~PS~------~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~ 719 (781)
+| .++.+++..+++. +|++|+||. .|+||++++|||+||+|||+|+.||..|++.++.+|+++++.|++
T Consensus 250 ~g----~~~~~~l~~~~~~-ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~ 324 (367)
T cd05844 250 LG----AQPHAEVRELMRR-ARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVA 324 (367)
T ss_pred CC----CCCHHHHHHHHHh-CCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCCHH
Confidence 99 6778899999995 999999997 599999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 720 ~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
+++++|.+++ +|++.++++++++++++.++|||+..
T Consensus 325 ~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~~~s~~~~ 360 (367)
T cd05844 325 ALAAALGRLL----ADPDLRARMGAAGRRRVEERFDLRRQ 360 (367)
T ss_pred HHHHHHHHHH----cCHHHHHHHHHHHHHHHHHHCCHHHH
Confidence 9999998887 89999999999999999999999764
No 29
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=2.6e-35 Score=321.95 Aligned_cols=360 Identities=16% Similarity=0.180 Sum_probs=252.0
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+|++.+++| |..||++.++. +|+++|.++||+|+ |+|........ ....
T Consensus 1 ~i~~i~~~~~~--------~~~gG~~~~~~--------~la~~L~~~g~~v~----v~~~~~~~~~~---------~~~~ 51 (363)
T cd04955 1 KIAIIGTRGIP--------AKYGGFETFVE--------ELAPRLVARGHEVT----VYCRSPYPKQK---------ETEY 51 (363)
T ss_pred CeEEEecCcCC--------cccCcHHHHHH--------HHHHHHHhcCCCEE----EEEccCCCCCc---------cccc
Confidence 79999999886 56799999999 77778899999999 99876432110 1112
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~ 439 (781)
.+++++++|.....+ ...+.+ .+ ..+...+. ...++|+||...+.. ..+..++++.++|++++.|+
T Consensus 52 ~~i~~~~~~~~~~~~--------~~~~~~--~~-~~~~~~~~--~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~v~~~h~ 117 (363)
T cd04955 52 NGVRLIHIPAPEIGG--------LGTIIY--DI-LAILHALF--VKRDIDHVHALGPAI-APFLPLLRLKGKKVVVNMDG 117 (363)
T ss_pred CCceEEEcCCCCccc--------hhhhHH--HH-HHHHHHHh--ccCCeEEEEecCccH-HHHHHHHHhcCCCEEEEccC
Confidence 367888877654211 000000 00 11111111 133566666555444 34444556679999999998
Q ss_pred CcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003987 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (781)
Q Consensus 440 l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~ 519 (781)
...... .|..... .+ ....+..+++.+|.||++|....+..+.. .|. +
T Consensus 118 ~~~~~~-----~~~~~~~--~~--~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-------------------~~~----~ 165 (363)
T cd04955 118 LEWKRA-----KWGRPAK--RY--LKFGEKLAVKFADRLIADSPGIKEYLKEK-------------------YGR----D 165 (363)
T ss_pred cceeec-----ccccchh--HH--HHHHHHHHHhhccEEEeCCHHHHHHHHHh-------------------cCC----C
Confidence 644321 1111100 00 11234567889999999998776522111 121 2
Q ss_pred ceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhc
Q 003987 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (781)
Q Consensus 520 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~ 599 (781)
+ .+||||+|...+.+.... . ..++. ++++.++++||+.+.||++.+++|++++..
T Consensus 166 ~-~~i~ngv~~~~~~~~~~~---~------------------~~~~~---~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~ 220 (363)
T cd04955 166 S-TYIPYGADHVVSSEEDEI---L------------------KKYGL---EPGRYYLLVGRIVPENNIDDLIEAFSKSNS 220 (363)
T ss_pred C-eeeCCCcChhhcchhhhh---H------------------HhcCC---CCCcEEEEEecccccCCHHHHHHHHHhhcc
Confidence 2 899999998766541111 0 11332 234568899999999999999999998864
Q ss_pred cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH-HcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCC-CC
Q 003987 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK-TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY-EA 677 (781)
Q Consensus 600 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~-elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~-E~ 677 (781)
+++|+++|+++. ...+.+.++ ++++.++|+|+| .++.+++..+++. +|++++||.. |+
T Consensus 221 ---~~~l~ivG~~~~------------~~~~~~~~~~~~~~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~~~e~ 280 (363)
T cd04955 221 ---GKKLVIVGNADH------------NTPYGKLLKEKAAADPRIIFVG----PIYDQELLELLRY-AALFYLHGHSVGG 280 (363)
T ss_pred ---CceEEEEcCCCC------------cchHHHHHHHHhCCCCcEEEcc----ccChHHHHHHHHh-CCEEEeCCccCCC
Confidence 799999999865 122333333 677889999999 6677899999995 9999999998 99
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcc
Q 003987 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVS 757 (781)
Q Consensus 678 fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~ 757 (781)
||++++|||+||+|||+|+.|+..|++.+ +|++++++|. ++++|..++ +|++.+.++++++++.+.++|||+
T Consensus 281 ~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~fs~~ 352 (363)
T cd04955 281 TNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEELE----ADPEEVSAMAKAARERIREKYTWE 352 (363)
T ss_pred CChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999999999999999999999966 7999988776 899997777 899999999999999999999996
Q ss_pred hhhhccchHHHH
Q 003987 758 SDGIVDPSPFVI 769 (781)
Q Consensus 758 ~~~il~~ye~ll 769 (781)
. +++.|.+++
T Consensus 353 ~--~~~~~~~~y 362 (363)
T cd04955 353 K--IADQYEELY 362 (363)
T ss_pred H--HHHHHHHHh
Confidence 5 556676665
No 30
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=5.3e-36 Score=339.28 Aligned_cols=397 Identities=16% Similarity=0.132 Sum_probs=264.6
Q ss_pred CcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcc-----
Q 003987 300 DTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKG----- 374 (781)
Q Consensus 300 ~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~----- 374 (781)
..||.++.+..+|-++.....+.=+-.|+.|...|-++||......+..+--..-.-.+.+...+-+++...+..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (578)
T PRK15490 172 GSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPELRQDFFLKEVLEEQVEVLEIAKITGNLFDDATIES 251 (578)
T ss_pred CCCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecCcccCcchhHHHHHhcCCceEEeeccchhhhhhccccc
Confidence 479999999977776544444444445788888888999997665554332111111333344455554222111
Q ss_pred -cccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEE-ecCCcccCCCCChhhH
Q 003987 375 -ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTI-AHALEKTKYPDSDIYW 452 (781)
Q Consensus 375 -~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t-~H~l~~~k~~~s~~~~ 452 (781)
+++.+++.. -|....-...+...+++ .+|||||+|...+++.+.++++..|+|++++ .|...... ...
T Consensus 252 ~~~~~~~~~~--~~~~~~~~~~l~~~ir~---~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~~--~~r--- 321 (578)
T PRK15490 252 PELRLLLSHL--PPVCKYGIKHLVPHLCE---RKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPVV--RKR--- 321 (578)
T ss_pred hHHHHHHhcC--ChHHHHHHHHHHHHHHH---cCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCcc--hhh---
Confidence 111111110 01111111223333333 4999999999888888999999999999654 56522111 001
Q ss_pred hhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCC
Q 003987 453 KKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDI 532 (781)
Q Consensus 453 k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~ 532 (781)
.+...|....+ ....+..+| +++.|....+. +.+ ..|+ ...|+.+||||+|...
T Consensus 322 -~~~~e~~~~~~---a~~i~~~sd-~v~~s~~v~~~-------l~~------------~lgi--p~~KI~VIyNGVD~~r 375 (578)
T PRK15490 322 -LFKPEYEPLYQ---ALAVVPGVD-FMSNNHCVTRH-------YAD------------WLKL--EAKHFQVVYNGVLPPS 375 (578)
T ss_pred -HHHHHHHHhhh---hceeEecch-hhhccHHHHHH-------HHH------------HhCC--CHHHEEEEeCCcchhh
Confidence 11111110000 001122333 34444433221 111 1133 3779999999999998
Q ss_pred CCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCc
Q 003987 533 YFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGY 612 (781)
Q Consensus 533 f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g 612 (781)
|.|........+. +...++ +++.++|+++||+...||...+++++.++.+..|+++|+|+|+|
T Consensus 376 f~p~~~~~~~~r~---------------~~~~~l--~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGdG 438 (578)
T PRK15490 376 TEPSSEVPHKIWQ---------------QFTQKT--QDADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGDG 438 (578)
T ss_pred cCccchhhHHHHH---------------Hhhhcc--CCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeCc
Confidence 8775432111100 001223 34567899999999999999999999998877899999999999
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcE
Q 003987 613 IDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPT 692 (781)
Q Consensus 613 ~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPV 692 (781)
+. .++++++++++++.++|+|+|++ .++..+|+. +|+||+||.+|+||++++|||+||+||
T Consensus 439 ~~------------~eeLk~la~elgL~d~V~FlG~~------~Dv~~~Laa-ADVfVlPS~~EGfp~vlLEAMA~GlPV 499 (578)
T PRK15490 439 DL------------RAEAQKRAEQLGILERILFVGAS------RDVGYWLQK-MNVFILFSRYEGLPNVLIEAQMVGVPV 499 (578)
T ss_pred hh------------HHHHHHHHHHcCCCCcEEECCCh------hhHHHHHHh-CCEEEEcccccCccHHHHHHHHhCCCE
Confidence 76 67899999999999999999953 467888885 999999999999999999999999999
Q ss_pred EEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHh
Q 003987 693 FATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINV 771 (781)
Q Consensus 693 VaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~ 771 (781)
|+|+.||..|+|.+|++|++++++|++++++++..+ ..+..+.+.+..|+++|++++.++|||+. +++.|+++++.
T Consensus 500 VATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA-~aL~~ll~~~~~mg~~ARe~V~e~FS~e~--Mv~~y~ki~~~ 575 (578)
T PRK15490 500 ISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYA-EKLVNLWRSRTGICQQTQSFLQERFTVEH--MVGTFVKTIAS 575 (578)
T ss_pred EEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCHHH--HHHHHHHHHHh
Confidence 999999999999999999999999999988876332 22334555667899999999999999955 66889888864
No 31
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=100.00 E-value=1.5e-36 Score=318.67 Aligned_cols=365 Identities=16% Similarity=0.196 Sum_probs=278.3
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecC
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~ 358 (781)
++|+++|+|.| |.+||++.++. .|++.|.+.||.|. ++|..+.+..|-.+ .
T Consensus 1 ~~i~mVsdff~---------P~~ggveshiy--------~lSq~li~lghkVv----vithayg~r~giry------l-- 51 (426)
T KOG1111|consen 1 SRILMVSDFFY---------PSTGGVESHIY--------ALSQCLIRLGHKVV----VITHAYGNRVGIRY------L-- 51 (426)
T ss_pred CcceeeCcccc---------cCCCChhhhHH--------HhhcchhhcCCeEE----EEeccccCccceee------e--
Confidence 58999999998 56899999999 88999999999998 99998877544322 2
Q ss_pred CCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCch--HHHHHHHHHcCCcEEEE
Q 003987 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGN--LVASLLAYKMGITQCTI 436 (781)
Q Consensus 359 ~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~--lva~llar~~gvp~v~t 436 (781)
+.+.+++.+|+... .+...+|.+.....-+...+.+ ++..|||+|.+.+. --+...++.+|...|+|
T Consensus 52 t~glkVyylp~~v~--------~n~tT~ptv~~~~Pllr~i~lr---E~I~ivhghs~fS~lahe~l~hartMGlktVfT 120 (426)
T KOG1111|consen 52 TNGLKVYYLPAVVG--------YNQTTFPTVFSDFPLLRPILLR---ERIEIVHGHSPFSYLAHEALMHARTMGLKTVFT 120 (426)
T ss_pred cCCceEEEEeeeee--------ecccchhhhhccCcccchhhhh---hceEEEecCChHHHHHHHHHHHHHhcCceEEEe
Confidence 33688999988752 2223333332222222333333 38999999999874 44778889999999999
Q ss_pred ecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCC
Q 003987 437 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 516 (781)
Q Consensus 437 ~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~ 516 (781)
-|++..-. ++....... .++ ..+...|.+||+|+.-.++ + .+...++
T Consensus 121 dHSlfGfa----d~~si~~n~----ll~-----~sL~~id~~IcVshtsken---t----------------vlr~~L~- 167 (426)
T KOG1111|consen 121 DHSLFGFA----DIGSILTNK----LLP-----LSLANIDRIICVSHTSKEN---T----------------VLRGALA- 167 (426)
T ss_pred cccccccc----chhhhhhcc----eee-----eeecCCCcEEEEeecCCCc---e----------------EEEeccC-
Confidence 99874422 211111111 122 3577899999999865331 1 1112233
Q ss_pred CCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHH
Q 003987 517 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 596 (781)
Q Consensus 517 f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~ 596 (781)
..|+.+|||.++.+.|.|.+.... ..+...|..++||..+||++.|++++.+
T Consensus 168 -p~kvsvIPnAv~~~~f~P~~~~~~---------------------------S~~i~~ivv~sRLvyrKGiDll~~iIp~ 219 (426)
T KOG1111|consen 168 -PAKVSVIPNAVVTHTFTPDAADKP---------------------------SADIITIVVASRLVYRKGIDLLLEIIPS 219 (426)
T ss_pred -HhHeeeccceeeccccccCccccC---------------------------CCCeeEEEEEeeeeeccchHHHHHHHHH
Confidence 679999999999999999653210 2334679999999999999999999999
Q ss_pred hhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCC
Q 003987 597 NSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 676 (781)
Q Consensus 597 l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E 676 (781)
+.+++|+++|+|+|+||. ...+++..+++.++++|.++| .++++++.+.+.+ .|+|++||+.|
T Consensus 220 vc~~~p~vrfii~GDGPk------------~i~lee~lEk~~l~~rV~~lG----~v~h~~Vr~vl~~-G~IFlntSlTE 282 (426)
T KOG1111|consen 220 VCDKHPEVRFIIIGDGPK------------RIDLEEMLEKLFLQDRVVMLG----TVPHDRVRDVLVR-GDIFLNTSLTE 282 (426)
T ss_pred HHhcCCCeeEEEecCCcc------------cchHHHHHHHhhccCceEEec----ccchHHHHHHHhc-CcEEeccHHHH
Confidence 999999999999999997 567888899999999999999 7889999999995 99999999999
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCc
Q 003987 677 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVV 756 (781)
Q Consensus 677 ~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw 756 (781)
+||++++|||+||+|||+|++||.+|++.++ -......+++++++++.+.+.++...|. .-.+++.+.|+|
T Consensus 283 afc~~ivEAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~v~~ai~~~~~~p~-------~~h~~v~~~y~w 353 (426)
T KOG1111|consen 283 AFCMVIVEAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGAVEKAITKLRTLPL-------EFHDRVKKMYSW 353 (426)
T ss_pred HHHHHHHHHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHHHHHHHHHhccCch-------hHHHHHHHhccH
Confidence 9999999999999999999999999999665 2223444799999999999877776653 346678889999
Q ss_pred chhhhccchHHHHHhc
Q 003987 757 SSDGIVDPSPFVINVI 772 (781)
Q Consensus 757 ~~~~il~~ye~ll~~~ 772 (781)
+ .++++-|+++..+
T Consensus 354 ~--dVa~rTekvy~r~ 367 (426)
T KOG1111|consen 354 K--DVAERTEKVYDRA 367 (426)
T ss_pred H--HHHHHHHHHHHHH
Confidence 4 4566667766544
No 32
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=3.9e-35 Score=325.49 Aligned_cols=286 Identities=20% Similarity=0.228 Sum_probs=210.7
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHH
Q 003987 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (781)
Q Consensus 405 ~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (781)
..+|||||+|++....+. .+++..++|++++.|+..... ....|+ + ....++.+|.+++.|..
T Consensus 83 ~~~~Dvv~~h~~~~~~~~-~~~~~~~~~~i~~~H~~~~~~---~~~~~~-------~------~~~~~~~~d~~i~~~~~ 145 (372)
T cd03792 83 DLDADVVVIHDPQPLALP-LFKKKRGRPWIWRCHIDLSSP---NRRVWD-------F------LQPYIEDYDAAVFHLPE 145 (372)
T ss_pred cCCCCEEEECCCCchhHH-HhhhcCCCeEEEEeeeecCCC---cHHHHH-------H------HHHHHHhCCEEeecHHH
Confidence 458999999988753322 223334899999999743211 111111 1 12456789999988844
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCC--CCcHHHHHHhhhhcchhhhccCcccccc
Q 003987 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYF--PYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (781)
Q Consensus 485 ~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~--p~~~~~~r~~~~~~~i~~~l~~~~~~~~ 562 (781)
.+. .++. ..++ +||||+|..... +........ .++
T Consensus 146 ~~~------------------------~~~~--~~~~-vipngvd~~~~~~~~~~~~~~~~----------------~~~ 182 (372)
T cd03792 146 YVP------------------------PQVP--PRKV-IIPPSIDPLSGKNRELSPADIEY----------------ILE 182 (372)
T ss_pred hcC------------------------CCCC--CceE-EeCCCCCCCccccCCCCHHHHHH----------------HHH
Confidence 322 0121 3455 999999975322 221111110 113
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003987 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~ 642 (781)
.+|+ ++++++|+++||+++.||++.+++|++++.+..++++|+|+|+|+.. +++ ..+.++++.++.++.++
T Consensus 183 ~~~~--~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~----~~~---~~~~~~~~~~~~~~~~~ 253 (372)
T cd03792 183 KYGI--DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATD----DPE---GWIVYEEVLEYAEGDPD 253 (372)
T ss_pred HhCC--CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCC----Cch---hHHHHHHHHHHhCCCCC
Confidence 3565 56789999999999999999999999999887789999999999651 111 12334555556778889
Q ss_pred EEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHH
Q 003987 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAA 722 (781)
Q Consensus 643 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA 722 (781)
|.|+|... ++.+++..+++ ++|+||+||.+|+||++++|||+||+|||+|+.||..++|.++.+|++++ ++++++
T Consensus 254 v~~~~~~~--~~~~~~~~~~~-~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~~a 328 (372)
T cd03792 254 IHVLTLPP--VSDLEVNALQR-ASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEEAA 328 (372)
T ss_pred eEEEecCC--CCHHHHHHHHH-hCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHHHH
Confidence 99998432 36788999999 59999999999999999999999999999999999999999999999987 567888
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 723 ELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 723 ~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
++|.+++ .|++.+++|+++|++.+.++|||+. +++.|.++++
T Consensus 329 ~~i~~ll----~~~~~~~~~~~~a~~~~~~~~s~~~--~~~~~~~~~~ 370 (372)
T cd03792 329 VRILYLL----RDPELRRKMGANAREHVRENFLITR--HLKDYLYLIS 370 (372)
T ss_pred HHHHHHH----cCHHHHHHHHHHHHHHHHHHcCHHH--HHHHHHHHHH
Confidence 8888777 8999999999999999999999965 4566766664
No 33
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=100.00 E-value=2.1e-34 Score=311.50 Aligned_cols=366 Identities=18% Similarity=0.200 Sum_probs=259.3
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||++++++.+ |..||.+.++. +|++.|+++||+|+ |+|......... ....
T Consensus 1 kIl~i~~~~~---------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~~~~-- 51 (375)
T cd03821 1 KILHVIPSFD---------PKYGGPVRVVL--------NLSKALAKLGHEVT----VATTDAGGDPLL------VALN-- 51 (375)
T ss_pred CeEEEcCCCC---------cccCCeehHHH--------HHHHHHHhcCCcEE----EEecCCCCccch------hhcc--
Confidence 6899987654 56899999999 77778899999999 887653321110 0000
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHH-HHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcEEEE
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLE-TFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQCTI 436 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~-~f~~~~~~~i~~~~~~kpDIIh~~~~~~--~lva~llar~~gvp~v~t 436 (781)
+........... ....... .+.......+ .....+||+||+|.... ...+...++..++|++++
T Consensus 52 -~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~-~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~ 118 (375)
T cd03821 52 -GVPVKLFSINVA-----------YGLNLARYLFPPSLLAWL-RLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVS 118 (375)
T ss_pred -Cceeeecccchh-----------hhhhhhhhccChhHHHHH-HHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEE
Confidence 000000000000 0000000 0111111111 12245899999987443 556667777889999999
Q ss_pred ecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCC
Q 003987 437 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 516 (781)
Q Consensus 437 ~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~ 516 (781)
.|+.......... .++ +....+......++.++.++++|......... ..
T Consensus 119 ~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~-----------------------~~ 168 (375)
T cd03821 119 PHGMLDPWALPHK-ALK------KRLAWFLFERRLLQAAAAVHATSEQEAAEIRR-----------------------LG 168 (375)
T ss_pred ccccccccccccc-hhh------hHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh-----------------------hC
Confidence 9986432211010 111 11111223456788899999998765442110 11
Q ss_pred CCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHH
Q 003987 517 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 596 (781)
Q Consensus 517 f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~ 596 (781)
+..++.++|||+|.+.+.+......+ +.++. +.++++|+++||+.+.||++.+++++.+
T Consensus 169 ~~~~~~vi~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~ 227 (375)
T cd03821 169 LKAPIAVIPNGVDIPPFAALPSRGRR-------------------RKFPI--LPDKRIILFLGRLHPKKGLDLLIEAFAK 227 (375)
T ss_pred CcccEEEcCCCcChhccCcchhhhhh-------------------hhccC--CCCCcEEEEEeCcchhcCHHHHHHHHHH
Confidence 26689999999999887664432211 12333 5678899999999999999999999999
Q ss_pred hhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCC
Q 003987 597 NSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 676 (781)
Q Consensus 597 l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E 676 (781)
+.+.+++++|+++|.+.. .+...++.+++++++.++|.|+| .++.+++..+++. +|++|+||..|
T Consensus 228 l~~~~~~~~l~i~G~~~~----------~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~e 292 (375)
T cd03821 228 LAERFPDWHLVIAGPDEG----------GYRAELKQIAAALGLEDRVTFTG----MLYGEDKAAALAD-ADLFVLPSHSE 292 (375)
T ss_pred hhhhcCCeEEEEECCCCc----------chHHHHHHHHHhcCccceEEEcC----CCChHHHHHHHhh-CCEEEeccccC
Confidence 988888999999998765 23455666678899999999999 6667899999995 99999999999
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCc
Q 003987 677 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVV 756 (781)
Q Consensus 677 ~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw 756 (781)
+||++++|||+||+|||+|+.||..|++.+ .+|+++++ +.++++++|.+++ .+++.++++++++++.+.++|||
T Consensus 293 ~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~ 366 (375)
T cd03821 293 NFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVDALAAALRRAL----ELPQRLKAMGENGRALVEERFSW 366 (375)
T ss_pred CCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCH
Confidence 999999999999999999999999999988 88998875 5599999998877 89999999999999999999999
Q ss_pred chh
Q 003987 757 SSD 759 (781)
Q Consensus 757 ~~~ 759 (781)
+..
T Consensus 367 ~~~ 369 (375)
T cd03821 367 TAI 369 (375)
T ss_pred HHH
Confidence 764
No 34
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=6.9e-34 Score=309.58 Aligned_cols=353 Identities=18% Similarity=0.236 Sum_probs=257.2
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++++..+ |+.||.+.++. +|++.|.++||+|+ |++......... .. .
T Consensus 1 kil~i~~~~~---------p~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~~---~ 50 (357)
T cd03795 1 RVLHVGKFYP---------PDRGGIEQVIR--------DLAEGLAARGIEVA----VLCASPEPKGRD------EE---R 50 (357)
T ss_pred CeeEecCCCC---------CCCCcHHHHHH--------HHHHHHHhCCCceE----EEecCCCCcchh------hh---c
Confidence 6899986554 56899999999 77788899999999 887653322111 01 1
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~ 439 (781)
.+..+.+++..... ...+.... ....+. ....+||+||+|++.............++|.+.+.|+
T Consensus 51 ~~~~~~~~~~~~~~----------~~~~~~~~----~~~~~~-~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 115 (357)
T cd03795 51 NGHRVIRAPSLLNV----------ASTPFSPS----FFKQLK-KLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHS 115 (357)
T ss_pred cCceEEEeeccccc----------ccccccHH----HHHHHH-hcCCCCCEEEEecCcchHHHHHHHhccCceEEEEEcC
Confidence 13355555433210 00011001 111111 1245899999998776333333333368899999996
Q ss_pred CcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003987 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (781)
Q Consensus 440 l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~ 519 (781)
...... .. ...|+ ..+...++.||.++++|......... +..+..
T Consensus 116 ~~~~~~----~~----~~~~~-----~~~~~~~~~~d~vi~~s~~~~~~~~~----------------------~~~~~~ 160 (357)
T cd03795 116 DIVKQK----LL----LKLYR-----PLQRRFLRRADAIVATSPNYAETSPV----------------------LRRFRD 160 (357)
T ss_pred hhhccc----hh----hhhhh-----HHHHHHHHhcCEEEeCcHHHHHHHHH----------------------hcCCcc
Confidence 322110 01 11111 12345789999999999876542111 011136
Q ss_pred ceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhc
Q 003987 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (781)
Q Consensus 520 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~ 599 (781)
++.+||||+|.+.+.+....... .... +.++++|+++||+.+.||++.+++|++++.
T Consensus 161 ~~~~i~~gi~~~~~~~~~~~~~~--------------------~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~- 217 (357)
T cd03795 161 KVRVIPLGLDPARYPRPDALEEA--------------------IWRR--AAGRPFFLFVGRLVYYKGLDVLLEAAAALP- 217 (357)
T ss_pred ceEEecCCCChhhcCCcchhhhH--------------------hhcC--CCCCcEEEEecccccccCHHHHHHHHHhcc-
Confidence 88999999999877654322110 0111 456789999999999999999999999886
Q ss_pred cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCC
Q 003987 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEA 677 (781)
Q Consensus 600 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~ 677 (781)
+++|+|+|+|+. ...+.++++++++.++|.|+| .++.+++..+++. +|++++||. .|+
T Consensus 218 ---~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~V~~~g----~v~~~~~~~~~~~-ad~~i~ps~~~~e~ 277 (357)
T cd03795 218 ---DAPLVIVGEGPL------------EAELEALAAALGLLDRVRFLG----RLDDEEKAALLAA-CDVFVFPSVERSEA 277 (357)
T ss_pred ---CcEEEEEeCChh------------HHHHHHHHHhcCCcceEEEcC----CCCHHHHHHHHHh-CCEEEeCCcccccc
Confidence 699999999965 567888888899999999999 6777899999995 999999996 599
Q ss_pred CcHHHHHHHHcCCcEEEcCcccccccccc-CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCc
Q 003987 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEH-GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVV 756 (781)
Q Consensus 678 fGltvlEAMa~GlPVVaT~~gG~~EiI~d-g~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw 756 (781)
||++++|||+||+|||+|+.|+..+.+.+ +.+|++++++|+++++++|.+++ +|++.+++|+++|++.+.++|||
T Consensus 278 ~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~ 353 (357)
T cd03795 278 FGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLL----EDPELRERLGEAARERAEEEFTA 353 (357)
T ss_pred cchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHhcch
Confidence 99999999999999999999999998886 89999999999999999998887 89999999999999999999999
Q ss_pred chh
Q 003987 757 SSD 759 (781)
Q Consensus 757 ~~~ 759 (781)
+.+
T Consensus 354 ~~~ 356 (357)
T cd03795 354 DRM 356 (357)
T ss_pred Hhh
Confidence 765
No 35
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=1e-33 Score=308.07 Aligned_cols=268 Identities=21% Similarity=0.296 Sum_probs=221.4
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCH
Q 003987 405 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 483 (781)
Q Consensus 405 ~~kpDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 483 (781)
..+||+||+|+... ..++.+.++..++|++++.|+......... ......++.+|.++++|.
T Consensus 77 ~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~vi~~s~ 139 (355)
T cd03799 77 RLGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSPDA-----------------IDLDEKLARADFVVAISE 139 (355)
T ss_pred hcCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccCch-----------------HHHHHHHhhCCEEEECCH
Confidence 35899999998754 455566666668999999996432111000 123457889999999999
Q ss_pred HHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccc
Q 003987 484 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 563 (781)
Q Consensus 484 ~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~ 563 (781)
...+.++.. .|.. ..++.++|||+|.+.+.+...
T Consensus 140 ~~~~~l~~~-------------------~~~~--~~~~~vi~~~~d~~~~~~~~~------------------------- 173 (355)
T cd03799 140 YNRQQLIRL-------------------LGCD--PDKIHVVHCGVDLERFPPRPP------------------------- 173 (355)
T ss_pred HHHHHHHHh-------------------cCCC--cccEEEEeCCcCHHHcCCccc-------------------------
Confidence 876632221 1222 678999999999877654320
Q ss_pred cCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 003987 564 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 643 (781)
Q Consensus 564 ~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V 643 (781)
. ...+++.|+++|++.+.||++.+++++.++.+..++++|+++|+++. .+.+++.++++++.++|
T Consensus 174 ~---~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v 238 (355)
T cd03799 174 P---PPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPL------------RDELEALIAELGLEDRV 238 (355)
T ss_pred c---ccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCcc------------HHHHHHHHHHcCCCCeE
Confidence 0 03456789999999999999999999999988778999999999976 56788889999999999
Q ss_pred EEeccccCcCChHHHHHHHHccCcEEEEcCCC------CCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCC
Q 003987 644 RWIAAQTNRARNGELYRYIADTKGAFVQPAFY------EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYH 717 (781)
Q Consensus 644 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~------E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d 717 (781)
+|.| .++.+++..+++. +|++++||.. |+||++++|||+||+|||+|+.|+..|++.++.+|++++++|
T Consensus 239 ~~~g----~~~~~~l~~~~~~-adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~ 313 (355)
T cd03799 239 TLLG----AKSQEEVRELLRA-ADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGD 313 (355)
T ss_pred EECC----cCChHHHHHHHHh-CCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCC
Confidence 9999 6677899999995 9999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 718 PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 718 ~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
+++++++|.+++ .+++.+.+++++|++++.++|||+..
T Consensus 314 ~~~l~~~i~~~~----~~~~~~~~~~~~a~~~~~~~~s~~~~ 351 (355)
T cd03799 314 PEALADAIERLL----DDPELRREMGEAGRARVEEEFDIRKQ 351 (355)
T ss_pred HHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 999999998887 79999999999999999999999765
No 36
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=100.00 E-value=3.1e-34 Score=313.27 Aligned_cols=349 Identities=15% Similarity=0.166 Sum_probs=252.3
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++++.. ..||.+.++. ++++.|.+.||+|+ ++|....... ..... ..
T Consensus 1 kIl~~~~~~-----------~~GG~~~~~~--------~l~~~L~~~~~~v~----~i~~~~~~~~---~~~~~----~~ 50 (358)
T cd03812 1 KILHIVGTM-----------NRGGIETFIM--------NYYRNLDRSKIQFD----FLVTSKEEGD---YDDEI----EK 50 (358)
T ss_pred CEEEEeCCC-----------CCccHHHHHH--------HHHHhcCccceEEE----EEEeCCCCcc---hHHHH----HH
Confidence 688887542 3699999999 66677788999999 8876532210 00011 11
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE-EEEec
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ-CTIAH 438 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~-v~t~H 438 (781)
.+..+++++.... ..+ .+...+.+.+. ..+||+||+|......++.++++..+.|. +.+.|
T Consensus 51 ~~~~~~~~~~~~~-----------~~~----~~~~~~~~~~~---~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 112 (358)
T cd03812 51 LGGKIYYIPARKK-----------NPL----KYFKKLYKLIK---KNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSH 112 (358)
T ss_pred cCCeEEEecCCCc-----------cHH----HHHHHHHHHHh---cCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEec
Confidence 2456666544321 112 12222333333 34899999999887677777777788775 45677
Q ss_pred CCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003987 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~ 518 (781)
.............+. ...+...++.+|.++++|.......... ...
T Consensus 113 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~i~~s~~~~~~~~~~-----------------------~~~ 158 (358)
T cd03812 113 NTSDSHDKKKKILKY-----------KVLRKLINRLATDYLACSEEAGKWLFGK-----------------------VKN 158 (358)
T ss_pred cccccccccchhhHH-----------HHHHHHHHhcCCEEEEcCHHHHHHHHhC-----------------------CCc
Confidence 654332111110000 1123456788999999998765521110 125
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003987 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.+||||+|.+.+.+........ ...+. ..++++|+++||+.+.||++.++++++++.
T Consensus 159 ~~~~vi~ngvd~~~~~~~~~~~~~~------------------~~~~~--~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~ 218 (358)
T cd03812 159 KKFKVIPNGIDLEKFIFNEEIRKKR------------------RELGI--LEDKFVIGHVGRFSEQKNHEFLIEIFAELL 218 (358)
T ss_pred ccEEEEeccCcHHHcCCCchhhhHH------------------HHcCC--CCCCEEEEEEeccccccChHHHHHHHHHHH
Confidence 7899999999998876654322111 11233 467889999999999999999999999999
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCC
Q 003987 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (781)
Q Consensus 599 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 678 (781)
+..++++|+|+|+|+. .+.+++.++++++.++|.|+|. .+++..+++. +|++|+||.+|+|
T Consensus 219 ~~~~~~~l~ivG~g~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~v~ps~~E~~ 279 (358)
T cd03812 219 KKNPNAKLLLVGDGEL------------EEEIKKKVKELGLEDKVIFLGV------RNDVPELLQA-MDVFLFPSLYEGL 279 (358)
T ss_pred HhCCCeEEEEEeCCch------------HHHHHHHHHhcCCCCcEEEecc------cCCHHHHHHh-cCEEEecccccCC
Confidence 8889999999999976 5678888999999999999995 3467888885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc
Q 003987 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERL 754 (781)
Q Consensus 679 GltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~y 754 (781)
|++++|||+||+|||+|+.||..|++.+ ..|++..++++++++++|.+++ +||+.++.++..+.......+
T Consensus 280 ~~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~----~~~~~~~~~~~~~~~~~~~~~ 350 (358)
T cd03812 280 PLVLIEAQASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLK----SEDRRERSSESIKKKGLDADD 350 (358)
T ss_pred CHHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHH----hCcchhhhhhhhhhccchhhh
Confidence 9999999999999999999999999988 5677777778999999998887 899999998888877664433
No 37
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=2.2e-33 Score=304.59 Aligned_cols=382 Identities=18% Similarity=0.246 Sum_probs=270.3
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++|.+.+ |..||...++. .+++.|+++||+|+ +++............. ......
T Consensus 1 kIl~i~~~~~---------~~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~~~~~--~~~~~~ 57 (394)
T cd03794 1 KILILSQYFP---------PELGGGAFRTT--------ELAEELVKRGHEVT----VITGSPNYPSGKIYKG--YKREEV 57 (394)
T ss_pred CEEEEecccC---------CccCCcceeHH--------HHHHHHHhCCceEE----EEecCCCccccccccc--ceEEec
Confidence 6999997665 34589999999 77777899999999 8876643322111000 011122
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcEEEEe
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQCTIA 437 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~--~lva~llar~~gvp~v~t~ 437 (781)
.++++++++...... ..++.+ +..+ ..+.......+.. ...+||+||++.+.. ...+..+++..++|++++.
T Consensus 58 ~~~~~~~~~~~~~~~--~~~~~~--~~~~-~~~~~~~~~~~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 131 (394)
T cd03794 58 DGVRVHRVPLPPYKK--NGLLKR--LLNY-LSFALSALLALLK-RRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEV 131 (394)
T ss_pred CCeEEEEEecCCCCc--cchHHH--HHhh-hHHHHHHHHHHHh-cccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEe
Confidence 357777777654321 000000 1111 1222223333321 245899999998432 5666677777799999999
Q ss_pred cCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003987 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (781)
Q Consensus 438 H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f 517 (781)
|+.+............. ...+.+.. ..+...++.+|.++++|....+.+. ..++.
T Consensus 132 h~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~d~vi~~s~~~~~~~~--------------------~~~~~-- 186 (394)
T cd03794 132 RDLWPESAVALGLLKNG-SLLYRLLR--KLERLIYRRADAIVVISPGMREYLV--------------------RRGVP-- 186 (394)
T ss_pred hhhcchhHHHccCcccc-chHHHHHH--HHHHHHHhcCCEEEEECHHHHHHHH--------------------hcCCC--
Confidence 98754322111000000 00001111 2355678999999999988765221 01222
Q ss_pred CCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHh
Q 003987 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (781)
Q Consensus 518 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l 597 (781)
..++.++|||+|...+.+......+ ...+. ..++++|+++|++.+.||++.+++++.++
T Consensus 187 ~~~~~~i~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~l 245 (394)
T cd03794 187 PEKISVIPNGVDLELFKPPPADESL-------------------RKELG--LDDKFVVLYAGNIGRAQGLDTLLEAAALL 245 (394)
T ss_pred cCceEEcCCCCCHHHcCCccchhhh-------------------hhccC--CCCcEEEEEecCcccccCHHHHHHHHHHH
Confidence 6799999999998777654432211 01121 45678899999999999999999999999
Q ss_pred hccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCC
Q 003987 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (781)
Q Consensus 598 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 677 (781)
.+. ++++|+++|+|+. .+.+.+++...++ ++|.++| .++.+++..+++. +|++++|+..|+
T Consensus 246 ~~~-~~~~l~i~G~~~~------------~~~~~~~~~~~~~-~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~ 306 (394)
T cd03794 246 KDR-PDIRFLIVGDGPE------------KEELKELAKALGL-DNVTFLG----RVPKEELPELLAA-ADVGLVPLKPGP 306 (394)
T ss_pred hhc-CCeEEEEeCCccc------------HHHHHHHHHHcCC-CcEEEeC----CCChHHHHHHHHh-hCeeEEeccCcc
Confidence 876 7899999999876 4566666666666 5799999 6677899999995 999999999887
Q ss_pred C-----cHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH
Q 003987 678 F-----GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (781)
Q Consensus 678 f-----GltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~ 752 (781)
+ |++++|||+||+|||+|+.+|..+++.++.+|++++++|+++++++|.+++ .|++.++++++++++.+.+
T Consensus 307 ~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~ 382 (394)
T cd03794 307 AFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELL----DDPEERAEMGENGRRYVEE 382 (394)
T ss_pred cccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 5 888999999999999999999999999989999999999999999998887 8999999999999999999
Q ss_pred hcCcchh
Q 003987 753 RLVVSSD 759 (781)
Q Consensus 753 ~ysw~~~ 759 (781)
+|||+..
T Consensus 383 ~~s~~~~ 389 (394)
T cd03794 383 KFSREKL 389 (394)
T ss_pred hhcHHHH
Confidence 9999765
No 38
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=100.00 E-value=3.3e-33 Score=302.54 Aligned_cols=360 Identities=19% Similarity=0.271 Sum_probs=258.6
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||++++...+ |..||...++. .++++|.++||+|+ ++|...+...... ...
T Consensus 1 kil~~~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~------~~~-- 51 (374)
T cd03817 1 KIGIFTDTYL---------PQVNGVATSIR--------RLAEELEKRGHEVY----VVAPSYPGAPEEE------EVV-- 51 (374)
T ss_pred CeeEeehhcc---------CCCCCeehHHH--------HHHHHHHHcCCeEE----EEeCCCCCCCccc------ccc--
Confidence 6899986543 67899999999 78888899999999 8887644321110 000
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEec
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~-~lva~llar~~gvp~v~t~H 438 (781)
.....+.+.... ......+ .+...+...+. ..+||+||++.... +..+..++++.++|++.+.|
T Consensus 52 -~~~~~~~~~~~~-------~~~~~~~----~~~~~~~~~~~---~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 116 (374)
T cd03817 52 -VVRPFRVPTFKY-------PDFRLPL----PIPRALIIILK---ELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYH 116 (374)
T ss_pred -cccccccccchh-------hhhhccc----cHHHHHHHHHh---hcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEec
Confidence 111111111100 0000011 11111222222 34899999998654 56677888899999999999
Q ss_pred CCcccCCCCChhhHhhhhccccchhhh-hHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003987 439 ALEKTKYPDSDIYWKKFDEKYHFSCQF-TADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~-~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f 517 (781)
+....- .... ............ ..+...++.||.+++.|....+..++ + +.
T Consensus 117 ~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~----~----------------~~--- 168 (374)
T cd03817 117 TMYEDY-THYV----PLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIADLLRE----Y----------------GV--- 168 (374)
T ss_pred CCHHHH-HHHH----hcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHHHHHh----c----------------CC---
Confidence 864311 0000 000000000000 23556788999999999876442111 1 22
Q ss_pred CCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHh
Q 003987 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (781)
Q Consensus 518 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l 597 (781)
..++.++|||+|...+.+......+ ..++. +.++++|+++|++.+.||++.+++++.++
T Consensus 169 ~~~~~vi~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~~ 227 (374)
T cd03817 169 KRPIEVIPTGIDLDRFEPVDGDDER-------------------RKLGI--PEDEPVLLYVGRLAKEKNIDFLIRAFARL 227 (374)
T ss_pred CCceEEcCCccchhccCccchhHHH-------------------HhcCC--CCCCeEEEEEeeeecccCHHHHHHHHHHH
Confidence 3468999999999887665433221 12333 45678899999999999999999999999
Q ss_pred hccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCC
Q 003987 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (781)
Q Consensus 598 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 677 (781)
.+..++++|+++|+++. .+.++++++++++.++|.|+| .++.+++..+++. +|++++|+..|+
T Consensus 228 ~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~l~~s~~e~ 290 (374)
T cd03817 228 LKEEPDVKLVIVGDGPE------------REELEELARELGLADRVIFTG----FVPREELPDYYKA-ADLFVFASTTET 290 (374)
T ss_pred HHhCCCeEEEEEeCCch------------HHHHHHHHHHcCCCCcEEEec----cCChHHHHHHHHH-cCEEEecccccC
Confidence 87778999999999866 567888888999999999999 6677899999995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc
Q 003987 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERL 754 (781)
Q Consensus 678 fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~y 754 (781)
+|++++|||+||+|||+|+.|+..|++.++.+|+++++.+. +++++|.+++ ++++.+++|++++++.+.+.+
T Consensus 291 ~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~ 362 (374)
T cd03817 291 QGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLL----QDPELRRRLSKNAEESAEKFS 362 (374)
T ss_pred cChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHH----hChHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998887 8999998777 899999999999999996543
No 39
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=3.1e-33 Score=302.60 Aligned_cols=332 Identities=16% Similarity=0.176 Sum_probs=235.9
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecC
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~ 358 (781)
|||+++++..+| .+.|..||.++++. +|++.|.++||+|+ +++...+.... ..
T Consensus 1 MkI~~i~~~~~~-----~~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~-----~~----- 53 (335)
T cd03802 1 MRIALVAPPREP-----VPPPAYGGTERVVA--------ALTEGLVARGHEVT----LFASGDSKTAA-----PL----- 53 (335)
T ss_pred CeEEEEcCCccc-----CCCcccCcHHHHHH--------HHHHHHHhcCceEE----EEecCCCCccc-----ce-----
Confidence 799999986654 13467899999999 77777899999999 88865332100 00
Q ss_pred CCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEec
Q 003987 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 359 ~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H 438 (781)
......+.. ................+.+.+. ..+|||||+|....... +++..++|+|++.|
T Consensus 54 ---~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~---~~~~Divh~~~~~~~~~---~~~~~~~~~v~~~h 115 (335)
T cd03802 54 ---VPVVPEPLR---------LDAPGRDRAEAEALALAERALA---AGDFDIVHNHSLHLPLP---FARPLPVPVVTTLH 115 (335)
T ss_pred ---eeccCCCcc---------cccchhhHhhHHHHHHHHHHHh---cCCCCEEEecCcccchh---hhcccCCCEEEEec
Confidence 011000000 0000000111122222223332 35899999999887554 56778999999999
Q ss_pred CCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003987 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~ 518 (781)
+....... + ........+.++++|...... + .. .
T Consensus 116 ~~~~~~~~-----~---------------~~~~~~~~~~~~~~s~~~~~~-------------------~-----~~--~ 149 (335)
T cd03802 116 GPPDPELL-----K---------------LYYAARPDVPFVSISDAQRRP-------------------W-----PP--L 149 (335)
T ss_pred CCCCcccc-----h---------------HHHhhCcCCeEEEecHHHHhh-------------------c-----cc--c
Confidence 76432210 0 113456778889998776441 0 01 1
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003987 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.+||||+|.+.|.+. ..+++.|+++||+.+.||++.+++++++
T Consensus 150 ~~~~vi~ngvd~~~~~~~--------------------------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~-- 195 (335)
T cd03802 150 PWVATVHNGIDLDDYPFR--------------------------------GPKGDYLLFLGRISPEKGPHLAIRAARR-- 195 (335)
T ss_pred cccEEecCCcChhhCCCC--------------------------------CCCCCEEEEEEeeccccCHHHHHHHHHh--
Confidence 588899999999877541 2346689999999999999999999865
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC-CCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC-CC
Q 003987 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK-LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-YE 676 (781)
Q Consensus 599 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elg-L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-~E 676 (781)
.+++|+|+|++.. .+.+...+.+.. +.++|.|+| .++..++..+++. +|++|+||. .|
T Consensus 196 ---~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~G----~~~~~~~~~~~~~-~d~~v~ps~~~E 255 (335)
T cd03802 196 ---AGIPLKLAGPVSD------------PDYFYREIAPELLDGPDIEYLG----EVGGAEKAELLGN-ARALLFPILWEE 255 (335)
T ss_pred ---cCCeEEEEeCCCC------------HHHHHHHHHHhcccCCcEEEeC----CCCHHHHHHHHHh-CcEEEeCCcccC
Confidence 3689999999976 233444444443 568999999 5667899999995 999999997 59
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCc
Q 003987 677 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVV 756 (781)
Q Consensus 677 ~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw 756 (781)
+||++++|||+||+|||+|+.||..|++.++.+|+++++ +++++++|.++. ..+ .+++++++.++|||
T Consensus 256 ~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~----~~~------~~~~~~~~~~~~s~ 323 (335)
T cd03802 256 PFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARAD----RLD------RAACRRRAERRFSA 323 (335)
T ss_pred CcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHh----ccH------HHHHHHHHHHhCCH
Confidence 999999999999999999999999999999999999986 999999997764 332 34678889999999
Q ss_pred chhhhccchHHHH
Q 003987 757 SSDGIVDPSPFVI 769 (781)
Q Consensus 757 ~~~~il~~ye~ll 769 (781)
+. +++.|.+++
T Consensus 324 ~~--~~~~~~~~y 334 (335)
T cd03802 324 AR--MVDDYLALY 334 (335)
T ss_pred HH--HHHHHHHHh
Confidence 65 556666654
No 40
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=3.3e-33 Score=302.87 Aligned_cols=362 Identities=19% Similarity=0.237 Sum_probs=256.9
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++++... |..||.+.++. .|+++|.++||+|+ ++|......... ..
T Consensus 1 kIl~i~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~--~~-------- 49 (364)
T cd03814 1 RIAIVTDTFL---------PQVNGVVRTLQ--------RLVEHLRARGHEVL----VIAPGPFRESEG--PA-------- 49 (364)
T ss_pred CeEEEecccC---------ccccceehHHH--------HHHHHHHHCCCEEE----EEeCCchhhccC--CC--------
Confidence 6899996553 45689999999 77888899999999 888764321110 00
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEec
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~-~lva~llar~~gvp~v~t~H 438 (781)
....+...+......+ +.... ....+.+.+. ..+||+||++.... +..+..++++.++|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~~------~~~~~-----~~~~~~~~~~---~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 115 (364)
T cd03814 50 RVVPVPSVPLPGYPEI------RLALP-----PRRRVRRLLD---AFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYH 115 (364)
T ss_pred CceeecccccCcccce------Eeccc-----chhhHHHHHH---hcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEe
Confidence 1122222222111110 00000 0112222232 34899999886654 56777888889999999999
Q ss_pred CCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003987 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~ 518 (781)
+......... ...... .+. ........+.+|.+++.|........ ... .
T Consensus 116 ~~~~~~~~~~--~~~~~~---~~~--~~~~~~~~~~~d~i~~~s~~~~~~~~----------------------~~~--~ 164 (364)
T cd03814 116 TDFPEYLRYY--GLGPLS---WLA--WAYLRWFHNRADRVLVPSPSLADELR----------------------ARG--F 164 (364)
T ss_pred cChHHHhhhc--ccchHh---Hhh--HHHHHHHHHhCCEEEeCCHHHHHHHh----------------------ccC--C
Confidence 7543211000 000000 000 11234567899999999987754100 011 4
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003987 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.+++||+|.+.|.+........ ..++ +.++++|+++||+.+.||++.+++++.++.
T Consensus 165 ~~~~~~~~g~~~~~~~~~~~~~~~~------------------~~~~---~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~ 223 (364)
T cd03814 165 RRVRLWPRGVDTELFHPRRRDEALR------------------ARLG---PPDRPVLLYVGRLAPEKNLEALLDADLPLR 223 (364)
T ss_pred CceeecCCCccccccCcccccHHHH------------------HHhC---CCCCeEEEEEeccccccCHHHHHHHHHHhh
Confidence 5889999999998887654322211 1122 345678999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCC
Q 003987 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (781)
Q Consensus 599 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 678 (781)
+. ++++|+|+|+++. .+.++ +..++|.|+| .++.+++..+++. +|++++||..|+|
T Consensus 224 ~~-~~~~l~i~G~~~~------------~~~~~------~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~~s~~e~~ 279 (364)
T cd03814 224 RR-PPVRLVIVGDGPA------------RARLE------ARYPNVHFLG----FLDGEELAAAYAS-ADVFVFPSRTETF 279 (364)
T ss_pred hc-CCceEEEEeCCch------------HHHHh------ccCCcEEEEe----ccCHHHHHHHHHh-CCEEEECcccccC
Confidence 77 8899999999866 22332 4567899999 5678899999995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcch
Q 003987 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSS 758 (781)
Q Consensus 679 GltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~ 758 (781)
|++++|||+||+|||+++.|+..|+++++.+|+++++.|.++++++|.+++ .|++.++++++++++.+ ++|+|+.
T Consensus 280 ~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~~~~~ 354 (364)
T cd03814 280 GLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALL----ADPELRRRMAARARAEA-ERRSWEA 354 (364)
T ss_pred CcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-hhcCHHH
Confidence 999999999999999999999999999999999999999999999998887 89999999999999999 8899965
Q ss_pred hhhccchHHHH
Q 003987 759 DGIVDPSPFVI 769 (781)
Q Consensus 759 ~~il~~ye~ll 769 (781)
. .+.+.+++
T Consensus 355 ~--~~~~~~~~ 363 (364)
T cd03814 355 F--LDNLLEAY 363 (364)
T ss_pred H--HHHHHHhh
Confidence 4 45555443
No 41
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=100.00 E-value=2.6e-33 Score=316.45 Aligned_cols=386 Identities=13% Similarity=0.047 Sum_probs=252.7
Q ss_pred CceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeee
Q 003987 277 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (781)
Q Consensus 277 ~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v 356 (781)
...||++++.-. +|.+..+. +++++|+++||+|+ |+|...+.. .+..
T Consensus 2 ~~~~~~~~~~~~-------------~~~~~R~~--------~~a~~L~~~G~~V~----ii~~~~~~~--------~~~~ 48 (415)
T cd03816 2 KRKRVCVLVLGD-------------IGRSPRMQ--------YHALSLAKHGWKVD----LVGYLETPP--------HDEI 48 (415)
T ss_pred CccEEEEEEecc-------------cCCCHHHH--------HHHHHHHhcCceEE----EEEecCCCC--------CHHH
Confidence 346788887421 35566667 67888999999999 888653221 0111
Q ss_pred cCCCCeEEEEeccCC-CcccccccccccCchhhHHHHHHHHHHHHHHHc-CCCceEEEEcCCCc---hHHHHHHHHHcCC
Q 003987 357 SGTEHTHILRVPFRS-EKGILRQWISRFDVWPYLETFTEDVGSEITAEL-QGFPDFIIGNYSDG---NLVASLLAYKMGI 431 (781)
Q Consensus 357 ~~~~~~~I~rvp~~~-~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~-~~kpDIIh~~~~~~---~lva~llar~~gv 431 (781)
....++.+++++... ..+. ...+..+.......+...+...+ ..+||+||+|.+.. ...+.++++..++
T Consensus 49 ~~~~~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~ 122 (415)
T cd03816 49 LSNPNITIHPLPPPPQRLNK------LPFLLFAPLKVLWQFFSLLWLLYKLRPADYILIQNPPSIPTLLIAWLYCLLRRT 122 (415)
T ss_pred hcCCCEEEEECCCCcccccc------chHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCC
Confidence 122367788776653 1110 01112222211111122211111 34899999987553 4456667788899
Q ss_pred cEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeee
Q 003987 432 TQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVV 511 (781)
Q Consensus 432 p~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~ 511 (781)
|+|++.|+.+..... .. ........++.. ..+...++.||.||++|....+.+.+
T Consensus 123 ~~V~~~h~~~~~~~~-~~--~~~~~~~~~~~~--~~e~~~~~~ad~ii~vS~~~~~~l~~-------------------- 177 (415)
T cd03816 123 KLIIDWHNYGYTILA-LK--LGENHPLVRLAK--WYEKLFGRLADYNLCVTKAMKEDLQQ-------------------- 177 (415)
T ss_pred eEEEEcCCchHHHHh-cc--cCCCCHHHHHHH--HHHHHHhhcCCEeeecCHHHHHHHHh--------------------
Confidence 999999986431100 00 000000011111 23556788999999999987552211
Q ss_pred ccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcc-ccccccCCCCCCCCCEEEEEeeccCCCChHHH
Q 003987 512 HGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPE-QNDEHVGTLSDRSKPIVFSMARLDHVKNMTGL 590 (781)
Q Consensus 512 ~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~-~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~L 590 (781)
.|++ ..|+.|||||. ...|.|.......... .. ...-+++. ......++. +++..+++++||+.+.||++.|
T Consensus 178 ~~~~--~~ki~vI~Ng~-~~~f~p~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~-~~~~~vi~~~grl~~~K~~~~l 250 (415)
T cd03816 178 FNNW--KIRATVLYDRP-PEQFRPLPLEEKHELF-LK--LAKTFLTRELRIGAVQLS-EERPALLVSSTSWTPDEDFGIL 250 (415)
T ss_pred hhcc--CCCeeecCCCC-HHHceeCcHHHHHHHH-Hh--ccccccccccccccceec-CCCceEEEEeccccCCCCHHHH
Confidence 1332 68999999994 4567665433211100 00 00000000 000011221 2344578889999999999999
Q ss_pred HHHHHHhhc------cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHc
Q 003987 591 VECYGKNSQ------LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIAD 664 (781)
Q Consensus 591 ieA~~~l~~------~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~ 664 (781)
++|++++++ .+|+++|+|+|+|+. .+.++++++++++.+.+.+.| .++.+++..+|+.
T Consensus 251 i~A~~~l~~~~~~~~~~~~i~l~ivG~G~~------------~~~l~~~~~~~~l~~~~~~~g----~~~~~~~~~~l~~ 314 (415)
T cd03816 251 LDALVAYEKSAATGPKLPKLLCIITGKGPL------------KEKYLERIKELKLKKVTIRTP----WLSAEDYPKLLAS 314 (415)
T ss_pred HHHHHHHHHhhcccccCCCEEEEEEecCcc------------HHHHHHHHHHcCCCcEEEEcC----cCCHHHHHHHHHh
Confidence 999999864 247899999999987 678999999999975444556 5678899999995
Q ss_pred cCcEEEEcC---CCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCC---HHH
Q 003987 665 TKGAFVQPA---FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKEN---PSH 738 (781)
Q Consensus 665 aadvfV~PS---~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~d---p~~ 738 (781)
+|++|.|+ ..|+||++++||||||+|||+|+.||..|+|+++.+|++++ |++++|++|..++ +| |+.
T Consensus 315 -aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll----~~~~~~~~ 387 (415)
T cd03816 315 -ADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLL----SNFPNRGK 387 (415)
T ss_pred -CCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHH----hcCCCHHH
Confidence 99999753 35789999999999999999999999999999999999994 8999999998887 67 999
Q ss_pred HHHHHHHHHHHHHHhcCcch
Q 003987 739 WKKISDGGLKRIYERLVVSS 758 (781)
Q Consensus 739 ~~~~s~~a~~~~~~~ysw~~ 758 (781)
+++|+++|++.. .++|+.
T Consensus 388 ~~~m~~~~~~~~--~~~~~~ 405 (415)
T cd03816 388 LNSLKKGAQEES--ELRWDE 405 (415)
T ss_pred HHHHHHHHHHhh--hcCHHH
Confidence 999999999988 456654
No 42
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=100.00 E-value=8.4e-33 Score=296.10 Aligned_cols=373 Identities=22% Similarity=0.327 Sum_probs=269.9
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++++... |..||...++. .|++.|.+.||+|. +++.......... ....
T Consensus 1 kI~ii~~~~~---------~~~~G~~~~~~--------~l~~~L~~~g~~v~----i~~~~~~~~~~~~------~~~~- 52 (374)
T cd03801 1 KILLVTPEYP---------PSVGGAERHVL--------ELARALAARGHEVT----VLTPGDGGLPDEE------EVGG- 52 (374)
T ss_pred CeeEEecccC---------CccCcHhHHHH--------HHHHHHHhcCceEE----EEecCCCCCCcee------eecC-
Confidence 6899997654 23689999999 77778889999999 8877643321110 0000
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~ 439 (781)
......+... ..........+...+...+. ..+||+||++...........++..++|++++.|+
T Consensus 53 --~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 117 (374)
T cd03801 53 --IVVVRPPPLL----------RVRRLLLLLLLALRLRRLLR---RERFDVVHAHDWLALLAAALAARLLGIPLVLTVHG 117 (374)
T ss_pred --cceecCCccc----------ccchhHHHHHHHHHHHHHhh---hcCCcEEEEechhHHHHHHHHHHhcCCcEEEEecc
Confidence 0000000000 00011111122222333333 34899999999887666557788889999999998
Q ss_pred CcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003987 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (781)
Q Consensus 440 l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~ 519 (781)
......... .. . ............++.+|.+++.|........+. .+.. ..
T Consensus 118 ~~~~~~~~~---~~-~----~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~-------------------~~~~--~~ 168 (374)
T cd03801 118 LEFGRPGNE---LG-L----LLKLARALERRALRRADRIIAVSEATREELREL-------------------GGVP--PE 168 (374)
T ss_pred chhhccccc---hh-H----HHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhc-------------------CCCC--CC
Confidence 765432211 00 0 000111234567889999999998776522211 1111 35
Q ss_pred ceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhc
Q 003987 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (781)
Q Consensus 520 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~ 599 (781)
++.++|||+|...+.+.. ...+ ...+. ..+++.|+++|++...||++.+++++..+.+
T Consensus 169 ~~~~i~~~~~~~~~~~~~-~~~~-------------------~~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~ 226 (374)
T cd03801 169 KITVIPNGVDTERFRPAP-RAAR-------------------RRLGI--PEDEPVILFVGRLVPRKGVDLLLEALAKLRK 226 (374)
T ss_pred cEEEecCcccccccCccc-hHHH-------------------hhcCC--cCCCeEEEEecchhhhcCHHHHHHHHHHHhh
Confidence 899999999998776543 1110 01111 4567889999999999999999999999988
Q ss_pred cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCc
Q 003987 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFG 679 (781)
Q Consensus 600 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fG 679 (781)
..++++|+++|++.. ...+++++++++..++|.|+| .++.+++..+++. +|++++|+..|++|
T Consensus 227 ~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~~~ 289 (374)
T cd03801 227 EYPDVRLVIVGDGPL------------REELEALAAELGLGDRVTFLG----FVPDEDLPALYAA-ADVFVLPSLYEGFG 289 (374)
T ss_pred hcCCeEEEEEeCcHH------------HHHHHHHHHHhCCCcceEEEe----ccChhhHHHHHHh-cCEEEecchhcccc
Confidence 778999999997755 677788888889999999999 5667899999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 680 LTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 680 ltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
++++|||+||+|||+|+.++..|++.++.+|+++++.|+++++++|.+++ .|++.++++++++++.+.+.|+|+..
T Consensus 290 ~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (374)
T cd03801 290 LVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLL----DDPELRRRLGEAARERVAERFSWDRV 365 (374)
T ss_pred chHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHHHhcCHHHH
Confidence 99999999999999999999999999999999999999999999998877 89999999999999999999999764
Q ss_pred hhccchHHHH
Q 003987 760 GIVDPSPFVI 769 (781)
Q Consensus 760 ~il~~ye~ll 769 (781)
.+.|.+++
T Consensus 366 --~~~~~~~~ 373 (374)
T cd03801 366 --AARTEEVY 373 (374)
T ss_pred --HHHHHHhh
Confidence 34454443
No 43
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=100.00 E-value=6.2e-33 Score=302.45 Aligned_cols=358 Identities=17% Similarity=0.239 Sum_probs=253.6
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||++++++. ..||.+.++. +|++.|.++||+|+ |++...... .. ....
T Consensus 1 ~il~~~~~~-----------~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~-~~-------~~~~- 48 (360)
T cd04951 1 KILYVITGL-----------GLGGAEKQVV--------DLADQFVAKGHQVA----IISLTGESE-VK-------PPID- 48 (360)
T ss_pred CeEEEecCC-----------CCCCHHHHHH--------HHHHhcccCCceEE----EEEEeCCCC-cc-------chhh-
Confidence 577776542 2589999999 77788899999999 887542111 00 0000
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEec
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAH 438 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~-gvp~v~t~H 438 (781)
......++.... .+.++.. ...+.+.+++ .+||+||+|...+++++.++++.. ++|++++.|
T Consensus 49 -~~~~~~~~~~~~------------~~~~~~~-~~~~~~~~~~---~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h 111 (360)
T cd04951 49 -ATIILNLNMSKN------------PLSFLLA-LWKLRKILRQ---FKPDVVHAHMFHANIFARLLRLFLPSPPLICTAH 111 (360)
T ss_pred -ccceEEeccccc------------chhhHHH-HHHHHHHHHh---cCCCEEEEcccchHHHHHHHHhhCCCCcEEEEee
Confidence 011112222111 1111111 1122333333 489999999988777666665543 678999999
Q ss_pred CCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003987 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~ 518 (781)
+..... .. ..+. .......++.++++|....+...+. .+++ .
T Consensus 112 ~~~~~~------~~------~~~~-----~~~~~~~~~~~~~~s~~~~~~~~~~-------------------~~~~--~ 153 (360)
T cd04951 112 SKNEGG------RL------RMLA-----YRLTDFLSDLTTNVSKEALDYFIAS-------------------KAFN--A 153 (360)
T ss_pred ccCchh------HH------HHHH-----HHHHhhccCceEEEcHHHHHHHHhc-------------------cCCC--c
Confidence 753211 00 0011 1123345777788787654421111 1122 5
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003987 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.+||||+|...|.+........ ++.+++ ++++++++++||+.+.||++.+++++.++.
T Consensus 154 ~~~~~i~ng~~~~~~~~~~~~~~~~-----------------~~~~~~--~~~~~~~l~~g~~~~~kg~~~li~a~~~l~ 214 (360)
T cd04951 154 NKSFVVYNGIDTDRFRKDPARRLKI-----------------RNALGV--KNDTFVILAVGRLVEAKDYPNLLKAFAKLL 214 (360)
T ss_pred ccEEEEccccchhhcCcchHHHHHH-----------------HHHcCc--CCCCEEEEEEeeCchhcCcHHHHHHHHHHH
Confidence 7899999999988776654332221 133555 567789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCC
Q 003987 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (781)
Q Consensus 599 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 678 (781)
+..++++|+|+|+|+. .+.+++.++++++.++|.|+|.+ +++..+++. +|++|+||..|+|
T Consensus 215 ~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-ad~~v~~s~~e~~ 275 (360)
T cd04951 215 SDYLDIKLLIAGDGPL------------RATLERLIKALGLSNRVKLLGLR------DDIAAYYNA-ADLFVLSSAWEGF 275 (360)
T ss_pred hhCCCeEEEEEcCCCc------------HHHHHHHHHhcCCCCcEEEeccc------ccHHHHHHh-hceEEecccccCC
Confidence 8778999999999976 56788888889998999999943 357888885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcch
Q 003987 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSS 758 (781)
Q Consensus 679 GltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~ 758 (781)
|++++|||+||+|||+++.|+..|++++ +|+.++++|+++++++|.++++ .+++.++.++++ ++.+.++|||+.
T Consensus 276 ~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~i~~ll~---~~~~~~~~~~~~-~~~~~~~~s~~~ 349 (360)
T cd04951 276 GLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDPEALANKIDEILK---MSGEERDIIGAR-RERIVKKFSINS 349 (360)
T ss_pred ChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHHHHHHHHh---CCHHHHHHHHHH-HHHHHHhcCHHH
Confidence 9999999999999999999999999976 7999999999999999988873 577777778777 888999999964
Q ss_pred hhhccchHHHHH
Q 003987 759 DGIVDPSPFVIN 770 (781)
Q Consensus 759 ~~il~~ye~ll~ 770 (781)
+++.|++++.
T Consensus 350 --~~~~~~~~y~ 359 (360)
T cd04951 350 --IVQQWLTLYT 359 (360)
T ss_pred --HHHHHHHHhh
Confidence 5577777763
No 44
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=100.00 E-value=1e-32 Score=299.79 Aligned_cols=357 Identities=16% Similarity=0.176 Sum_probs=248.9
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+||++.. |..||.+.++. +|+++|.+.||+|+ +++............ ..
T Consensus 1 kI~~v~~~~----------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~~-------~~ 51 (366)
T cd03822 1 RIALVSPYP----------PRKCGIATFTT--------DLVNALSARGPDVL----VVSVAALYPSLLYGG-------EQ 51 (366)
T ss_pred CeEEecCCC----------CCCCcHHHHHH--------HHHHHhhhcCCeEE----EEEeecccCcccCCC-------cc
Confidence 799998642 45799999999 77778899999999 776553321111000 00
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc---h---HHHHHHHHHcCCcE
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG---N---LVASLLAYKMGITQ 433 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~---~---lva~llar~~gvp~ 433 (781)
....... ......+ ..+.+.+. ..+||+||++.+.+ . .......+..++|+
T Consensus 52 ~~~~~~~---------------~~~~~~~-----~~~~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (366)
T cd03822 52 EVVRVIV---------------LDNPLDY-----RRAARAIR---LSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPV 108 (366)
T ss_pred cceeeee---------------cCCchhH-----HHHHHHHh---hcCCCEEEEeeccccccchhhHHHHHHHhhcCCCE
Confidence 0000000 0001111 12223333 34899999887432 1 22222234589999
Q ss_pred EEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeecc
Q 003987 434 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHG 513 (781)
Q Consensus 434 v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~g 513 (781)
+++.|+..... . .+ . ........++.+|.|+++|..... +. +
T Consensus 109 i~~~h~~~~~~-~----~~-----~-----~~~~~~~~~~~~d~ii~~s~~~~~---~~---------------~----- 150 (366)
T cd03822 109 VVTLHTVLLHE-P----RP-----G-----DRALLRLLLRRADAVIVMSSELLR---AL---------------L----- 150 (366)
T ss_pred EEEEecCCccc-c----ch-----h-----hhHHHHHHHhcCCEEEEeeHHHHH---HH---------------H-----
Confidence 99999861110 0 00 0 001234567899999999733322 11 0
Q ss_pred CCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHH
Q 003987 514 IDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVEC 593 (781)
Q Consensus 514 i~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA 593 (781)
...+..++.+||||+|...+.+...... .+. ..++++|+++||+.+.||++.+++|
T Consensus 151 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~----------------------~~~--~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 151 LRAYPEKIAVIPHGVPDPPAEPPESLKA----------------------LGG--LDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred hhcCCCcEEEeCCCCcCcccCCchhhHh----------------------hcC--CCCCeEEEEEeeccCCCCHHHHHHH
Confidence 0111469999999999876654332110 111 4567899999999999999999999
Q ss_pred HHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcC
Q 003987 594 YGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 673 (781)
Q Consensus 594 ~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS 673 (781)
+.++.+..++++|+|+|++..... .......++++++++.++|.|+|. .++.+++..+++. +|++++||
T Consensus 207 ~~~~~~~~~~~~l~i~G~~~~~~~-------~~~~~~~~~i~~~~~~~~v~~~~~---~~~~~~~~~~~~~-ad~~v~ps 275 (366)
T cd03822 207 LPLLVAKHPDVRLLVAGETHPDLE-------RYRGEAYALAERLGLADRVIFINR---YLPDEELPELFSA-ADVVVLPY 275 (366)
T ss_pred HHHHHhhCCCeEEEEeccCccchh-------hhhhhhHhHHHhcCCCCcEEEecC---cCCHHHHHHHHhh-cCEEEecc
Confidence 999988888999999999865100 001111145788899999999982 3778899999996 99999999
Q ss_pred CCC--CCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 003987 674 FYE--AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 751 (781)
Q Consensus 674 ~~E--~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~ 751 (781)
.+| +||++++|||+||+|||+|+.|| .+.+.++.+|++++++|+++++++|.+++ +|++.+.+|++++++.+.
T Consensus 276 ~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~----~~~~~~~~~~~~~~~~~~ 350 (366)
T cd03822 276 RSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLL----ADPELAQALRARAREYAR 350 (366)
T ss_pred cccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHh
Confidence 999 99999999999999999999999 77778888999999999999999998887 899999999999999996
Q ss_pred HhcCcchhhhccchHHHH
Q 003987 752 ERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 752 ~~ysw~~~~il~~ye~ll 769 (781)
+ |||+. +++.|.+++
T Consensus 351 ~-~s~~~--~~~~~~~~~ 365 (366)
T cd03822 351 A-MSWER--VAERYLRLL 365 (366)
T ss_pred h-CCHHH--HHHHHHHHh
Confidence 6 99965 445666554
No 45
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=100.00 E-value=8.9e-34 Score=313.67 Aligned_cols=347 Identities=15% Similarity=0.180 Sum_probs=236.1
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHC--CCceeecceEEEccCCCCCCCccCcceeee
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQ--GLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~--GheV~~~v~VvT~~~p~~~~~~~~~~~e~v 356 (781)
|||+++++. + |..||++.++. ++++.|.++ ||+|. ++++..+... ......
T Consensus 1 mkI~~~~~~-~---------~~~GG~e~~~~--------~l~~~L~~~~~g~~v~----v~~~~~~~~~-----~~~~~~ 53 (359)
T PRK09922 1 MKIAFIGEA-V---------SGFGGMETVIS--------NVINTFEESKINCEMF----FFCRNDKMDK-----AWLKEI 53 (359)
T ss_pred CeeEEeccc-c---------cCCCchhHHHH--------HHHHHhhhcCcceeEE----EEecCCCCCh-----HHHHhc
Confidence 799999863 3 34699999999 777778999 77777 7776533110 000000
Q ss_pred cCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE--E
Q 003987 357 SGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ--C 434 (781)
Q Consensus 357 ~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~--v 434 (781)
.-.......++++.. .. .....+.+.+.+ .+||+||+|.......+.++++..++|. +
T Consensus 54 ~~~~~~~~~~~~~~~----------~~-------~~~~~l~~~l~~---~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (359)
T PRK09922 54 KYAQSFSNIKLSFLR----------RA-------KHVYNFSKWLKE---TQPDIVICIDVISCLYANKARKKSGKQFKIF 113 (359)
T ss_pred chhcccccchhhhhc----------cc-------HHHHHHHHHHHh---cCCCEEEEcCHHHHHHHHHHHHHhCCCCeEE
Confidence 000000000111000 00 111223333433 4899999998766677777777777654 4
Q ss_pred EEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccC
Q 003987 435 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGI 514 (781)
Q Consensus 435 ~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi 514 (781)
.+.|...... ..+. ...+..+|.++++|....+.+. ..|+
T Consensus 114 ~~~h~~~~~~------------~~~~--------~~~~~~~d~~i~~S~~~~~~~~--------------------~~~~ 153 (359)
T PRK09922 114 SWPHFSLDHK------------KHAE--------CKKITCADYHLAISSGIKEQMM--------------------ARGI 153 (359)
T ss_pred EEecCccccc------------chhh--------hhhhhcCCEEEEcCHHHHHHHH--------------------HcCC
Confidence 4455321100 0000 0123689999999987654211 1233
Q ss_pred CCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeecc--CCCChHHHHH
Q 003987 515 DVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD--HVKNMTGLVE 592 (781)
Q Consensus 515 ~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~--~~Kgl~~Lie 592 (781)
+ ..++.+||||+|.+.+..... ...++++|+++||+. +.||+..+++
T Consensus 154 ~--~~ki~vi~N~id~~~~~~~~~-----------------------------~~~~~~~i~~~Grl~~~~~k~~~~l~~ 202 (359)
T PRK09922 154 S--AQRISVIYNPVEIKTIIIPPP-----------------------------ERDKPAVFLYVGRLKFEGQKNVKELFD 202 (359)
T ss_pred C--HHHEEEEcCCCCHHHccCCCc-----------------------------ccCCCcEEEEEEEEecccCcCHHHHHH
Confidence 3 568999999999654322110 023467899999996 4699999999
Q ss_pred HHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEc
Q 003987 593 CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQP 672 (781)
Q Consensus 593 A~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~P 672 (781)
++.++.. +++|+|+|+|++ .+.++++++++++.++|.|+|++.+ +.+++..+++. +|++|+|
T Consensus 203 a~~~~~~---~~~l~ivG~g~~------------~~~l~~~~~~~~l~~~v~f~G~~~~--~~~~~~~~~~~-~d~~v~~ 264 (359)
T PRK09922 203 GLSQTTG---EWQLHIIGDGSD------------FEKCKAYSRELGIEQRIIWHGWQSQ--PWEVVQQKIKN-VSALLLT 264 (359)
T ss_pred HHHhhCC---CeEEEEEeCCcc------------HHHHHHHHHHcCCCCeEEEecccCC--cHHHHHHHHhc-CcEEEEC
Confidence 9988743 799999999977 6778999999999999999997653 35678888885 9999999
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEcC-ccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHH--HHHHHHHHHHH
Q 003987 673 AFYEAFGLTVVEAMTCGLPTFATC-HGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSH--WKKISDGGLKR 749 (781)
Q Consensus 673 S~~E~fGltvlEAMa~GlPVVaT~-~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~--~~~~s~~a~~~ 749 (781)
|.+|+||++++||||||+|||+|+ .||+.|+|.++.+|++++++|+++++++|.+++ +|++. ...+++++++.
T Consensus 265 s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~----~~~~~~~~~~~~~~~~~~ 340 (359)
T PRK09922 265 SKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVI----SGEVKYQHDAIPNSIERF 340 (359)
T ss_pred CcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHH----hCcccCCHHHHHHHHHHh
Confidence 999999999999999999999999 999999999999999999999999999999887 77763 44445555444
Q ss_pred HHHhcCcchhhhccchHHH
Q 003987 750 IYERLVVSSDGIVDPSPFV 768 (781)
Q Consensus 750 ~~~~ysw~~~~il~~ye~l 768 (781)
..++|.- .+++.|+.+
T Consensus 341 ~~~~~~~---~~~~~~~~~ 356 (359)
T PRK09922 341 YEVLYFK---NLNNALFSK 356 (359)
T ss_pred hHHHHHH---HHHHHHHHH
Confidence 4443321 444555544
No 46
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=4.8e-34 Score=327.79 Aligned_cols=291 Identities=18% Similarity=0.261 Sum_probs=229.2
Q ss_pred CCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCcccCC----CCChhhHhhhhcc-ccchhhhhHHHHHHhhCCEEE
Q 003987 406 GFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKY----PDSDIYWKKFDEK-YHFSCQFTADLIAMNNADFII 479 (781)
Q Consensus 406 ~kpDIIh~~~~~-~~lva~llar~~gvp~v~t~H~l~~~k~----~~s~~~~k~~~~~-y~f~~~~~~e~~a~~~AD~II 479 (781)
.++|+||+|... .++++.++++..|+|+++|.|+...... .........+... .++.. ..+..+++.||.|+
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~ad~Ii 249 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFE--SLGRLAYQAADRIT 249 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHH--HHHHHHHHhCCEEE
Confidence 478999999754 4688888999999999999998643110 0000000000000 11111 23556889999999
Q ss_pred ecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccc
Q 003987 480 TSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQ 559 (781)
Q Consensus 480 t~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~ 559 (781)
++|....... ...|++ ..|+.|||||+|.+.|.+....
T Consensus 250 ~~s~~~~~~~--------------------~~~g~~--~~ki~vIpNgid~~~f~~~~~~-------------------- 287 (475)
T cd03813 250 TLYEGNRERQ--------------------IEDGAD--PEKIRVIPNGIDPERFAPARRA-------------------- 287 (475)
T ss_pred ecCHHHHHHH--------------------HHcCCC--HHHeEEeCCCcCHHHcCCcccc--------------------
Confidence 9998764411 011333 6799999999999887664321
Q ss_pred cccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC
Q 003987 560 NDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL 639 (781)
Q Consensus 560 ~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL 639 (781)
+. ++++++|+++||+.+.||++.+++|++.+.+..|+++|+|+|+++. +.++.++++++++++++
T Consensus 288 -----~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~--------~~~~~~e~~~li~~l~l 352 (475)
T cd03813 288 -----RP--EKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDE--------DPEYAEECRELVESLGL 352 (475)
T ss_pred -----cc--CCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCc--------ChHHHHHHHHHHHHhCC
Confidence 00 3567899999999999999999999999988889999999999853 12456788999999999
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc------CCeEEEE
Q 003987 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH------GASGFHI 713 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d------g~~G~lv 713 (781)
.++|+|+| ..++..+++. +|++|+||..|+||++++||||||+|||+|+.||..|++.+ |.+|+++
T Consensus 353 ~~~V~f~G-------~~~v~~~l~~-aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv 424 (475)
T cd03813 353 EDNVKFTG-------FQNVKEYLPK-LDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVV 424 (475)
T ss_pred CCeEEEcC-------CccHHHHHHh-CCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEE
Confidence 99999999 1356778884 99999999999999999999999999999999999999998 6799999
Q ss_pred CCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 714 DPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 714 ~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
++.|+++++++|.+++ .|++.+++++++|++++.+.|+|++ +++.|.+++
T Consensus 425 ~~~d~~~la~ai~~ll----~~~~~~~~~~~~a~~~v~~~~s~~~--~~~~y~~lY 474 (475)
T cd03813 425 PPADPEALARAILRLL----KDPELRRAMGEAGRKRVERYYTLER--MIDSYRRLY 474 (475)
T ss_pred CCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHhCCHHH--HHHHHHHHh
Confidence 9999999999998887 8999999999999999999999965 556777665
No 47
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=100.00 E-value=4.4e-33 Score=300.04 Aligned_cols=362 Identities=17% Similarity=0.182 Sum_probs=263.0
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++++... .||.+.++. .|++.|.+.|++|. +++....... ..... .
T Consensus 1 ~i~~i~~~~~-----------~gG~~~~~~--------~l~~~l~~~~~~v~----~~~~~~~~~~----~~~~~----~ 49 (365)
T cd03807 1 KVLHVITGLD-----------VGGAERMLV--------RLLKGLDRDRFEHV----VISLTDRGEL----GEELE----E 49 (365)
T ss_pred CeEEEEeecc-----------CccHHHHHH--------HHHHHhhhccceEE----EEecCcchhh----hHHHH----h
Confidence 5788875432 389999999 77788899999999 8775432211 11111 1
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEec
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAH 438 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~-~gvp~v~t~H 438 (781)
.++.+..++.... ...+ .+...+.+.+.. .+||+||++.......+...++. .+++++.+.|
T Consensus 50 ~~i~v~~~~~~~~----------~~~~----~~~~~~~~~~~~---~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (365)
T cd03807 50 AGVPVYCLGKRPG----------RPDP----GALLRLYKLIRR---LRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIR 112 (365)
T ss_pred cCCeEEEEecccc----------cccH----HHHHHHHHHHHh---hCCCEEEeccccccHHHHHHHHhcCCCcEEEEec
Confidence 2456666554431 0111 112233333433 38999999987777776666666 6899999999
Q ss_pred CCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003987 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~ 518 (781)
....... .+. ...+. .......+.+|.++++|......... .|++ .
T Consensus 113 ~~~~~~~-----~~~--~~~~~-----~~~~~~~~~~~~~i~~s~~~~~~~~~--------------------~~~~--~ 158 (365)
T cd03807 113 HSDLDLG-----KKS--TRLVA-----RLRRLLSSFIPLIVANSAAAAEYHQA--------------------IGYP--P 158 (365)
T ss_pred CCccccc-----chh--HhHHH-----HHHHHhccccCeEEeccHHHHHHHHH--------------------cCCC--h
Confidence 8654321 010 11111 12334667889999999876542111 1232 5
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003987 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.++|||+|...+.+........ ++++++ ++++++|+++||+.+.||++.+++++.++.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~~~-----------------~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~ 219 (365)
T cd03807 159 KKIVVIPNGVDTERFSPDLDARARL-----------------REELGL--PEDTFLIGIVARLHPQKDHATLLRAAALLL 219 (365)
T ss_pred hheeEeCCCcCHHhcCCcccchHHH-----------------HHhcCC--CCCCeEEEEecccchhcCHHHHHHHHHHHH
Confidence 6899999999988776654332211 123555 567788999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH-HcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCC
Q 003987 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK-TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (781)
Q Consensus 599 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~-elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 677 (781)
+..++++|+|+|.++. ......... ++++.++|.|+|.+ +++..+++. +|++++||..|+
T Consensus 220 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~ps~~e~ 280 (365)
T cd03807 220 KKFPNARLLLVGDGPD------------RANLELLALKELGLEDKVILLGER------SDVPALLNA-LDVFVLSSLSEG 280 (365)
T ss_pred HhCCCeEEEEecCCcc------------hhHHHHHHHHhcCCCceEEEcccc------ccHHHHHHh-CCEEEeCCcccc
Confidence 8788999999999876 334444554 78899999999942 467888885 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcc
Q 003987 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVS 757 (781)
Q Consensus 678 fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~ 757 (781)
||++++|||+||+|||+|+.||..|++.+ +|++++++|+++++++|.+++ +|++.+.++++++++.+.++|||+
T Consensus 281 ~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 354 (365)
T cd03807 281 FPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALL----ADPALRQALGEAARERIEENFSIE 354 (365)
T ss_pred CCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999999999999999999999977 899999999999999998887 789999999999999999999996
Q ss_pred hhhhccchHHHH
Q 003987 758 SDGIVDPSPFVI 769 (781)
Q Consensus 758 ~~~il~~ye~ll 769 (781)
. +++.|.+++
T Consensus 355 ~--~~~~~~~~y 364 (365)
T cd03807 355 A--MVEAYEELY 364 (365)
T ss_pred H--HHHHHHHHh
Confidence 5 456666654
No 48
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=7.9e-33 Score=312.21 Aligned_cols=369 Identities=13% Similarity=0.082 Sum_probs=239.4
Q ss_pred CceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCC-CceeecceEEEccCCCCCCC-------c
Q 003987 277 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQG-LDISPKILIVTRLIPDAKGT-------T 348 (781)
Q Consensus 277 ~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~G-heV~~~v~VvT~~~p~~~~~-------~ 348 (781)
+.|||+|+|.-.. |..+|+.+.++ .++..|.++| |+|+ |+++..+..... .
T Consensus 3 ~~mrIaivTdt~l---------P~vnGva~s~~--------~~a~~L~~~G~heV~----vvaP~~~~~~~~~~~~~~~~ 61 (462)
T PLN02846 3 KKQHIAIFTTASL---------PWMTGTAVNPL--------FRAAYLAKDGDREVT----LVIPWLSLKDQKLVYPNKIT 61 (462)
T ss_pred CCCEEEEEEcCCC---------CCCCCeeccHH--------HHHHHHHhcCCcEEE----EEecCCcccccccccccccc
Confidence 3589999997554 78999999999 7777899999 7999 998765432110 0
Q ss_pred cCcc---eeeecCCCCeEEEEeccCCCcccccccccc--cCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHH-
Q 003987 349 CNQR---LERVSGTEHTHILRVPFRSEKGILRQWISR--FDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLV- 421 (781)
Q Consensus 349 ~~~~---~e~v~~~~~~~I~rvp~~~~~~~~~~~isr--~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~-~lv- 421 (781)
+... ...+....+.+|.++|..+... .+.+.+. ..+++ ..++.+.+.+. +|||||.+.+.. ++.
T Consensus 62 f~~~~~~e~~~~~~~~~~v~r~~s~~~p~-yp~r~~~~~r~~~~-----~~~i~~~l~~~---~pDVIHv~tP~~LG~~~ 132 (462)
T PLN02846 62 FSSPSEQEAYVRQWLEERISFLPKFSIKF-YPGKFSTDKRSILP-----VGDISETIPDE---EADIAVLEEPEHLTWYH 132 (462)
T ss_pred ccCchhhhhhhhhhccCeEEEeccccccc-CcccccccccccCC-----hHHHHHHHHhc---CCCEEEEcCchhhhhHH
Confidence 0000 0011111123555655433211 0000100 01111 22444555443 899999999886 555
Q ss_pred -HHHHHHHcCCcEEEEecCCcccCCCCC-h--hhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccc
Q 003987 422 -ASLLAYKMGITQCTIAHALEKTKYPDS-D--IYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYE 497 (781)
Q Consensus 422 -a~llar~~gvp~v~t~H~l~~~k~~~s-~--~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qye 497 (781)
|..+++++++ +|.++|+... .|... . ..... ..+++.++ ..-..+|.+++.|..... +
T Consensus 133 ~g~~~~~k~~~-vV~tyHT~y~-~Y~~~~~~g~~~~~---l~~~~~~~----~~r~~~d~vi~pS~~~~~--------l- 194 (462)
T PLN02846 133 HGKRWKTKFRL-VIGIVHTNYL-EYVKREKNGRVKAF---LLKYINSW----VVDIYCHKVIRLSAATQD--------Y- 194 (462)
T ss_pred HHHHHHhcCCc-EEEEECCChH-HHHHHhccchHHHH---HHHHHHHH----HHHHhcCEEEccCHHHHH--------H-
Confidence 6667777766 8889998321 11100 0 00000 01111111 111348999999974422 0
Q ss_pred cccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEE
Q 003987 498 SHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFS 577 (781)
Q Consensus 498 s~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~ 577 (781)
.....+.++|||.+.|.|....... ..+ ..+.-.++++|
T Consensus 195 --------------------~~~~i~~v~GVd~~~f~~~~~~~~~--------------------~~~-~~~~~~~~~l~ 233 (462)
T PLN02846 195 --------------------PRSIICNVHGVNPKFLEIGKLKLEQ--------------------QKN-GEQAFTKGAYY 233 (462)
T ss_pred --------------------hhCEEecCceechhhcCCCcccHhh--------------------hcC-CCCCcceEEEE
Confidence 1123334589999988775432111 011 00112357899
Q ss_pred EeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHH
Q 003987 578 MARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGE 657 (781)
Q Consensus 578 vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~e 657 (781)
+|||.+.||++.|++|++++.+..++++|+|+|+|++ .++++++++++++..++ |.|. ...+
T Consensus 234 vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~------------~~~L~~~a~~l~l~~~v-f~G~----~~~~- 295 (462)
T PLN02846 234 IGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGED------------SDEVKAAAEKLELDVRV-YPGR----DHAD- 295 (462)
T ss_pred EecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCcc------------HHHHHHHHHhcCCcEEE-ECCC----CCHH-
Confidence 9999999999999999999987778999999999988 77899999999987554 7773 2333
Q ss_pred HHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHH
Q 003987 658 LYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPS 737 (781)
Q Consensus 658 l~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~ 737 (781)
.+++ ++|+||+||.+|+||++++||||||+|||+++.++ .+++.++.+|+.++ |.++++++|..++. .++
T Consensus 296 --~~~~-~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~~~l~---~~~- 365 (462)
T PLN02846 296 --PLFH-DYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATLKALA---EEP- 365 (462)
T ss_pred --HHHH-hCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHHHHHHc---cCc-
Confidence 4555 58999999999999999999999999999999998 59999999999995 89999999998873 233
Q ss_pred HHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 738 HWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 738 ~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
..++.+++ +.|||+ +..+.|.+++.
T Consensus 366 --~~~~~~a~----~~~SWe--~~~~~l~~~~~ 390 (462)
T PLN02846 366 --APLTDAQR----HELSWE--AATERFLRVAD 390 (462)
T ss_pred --hhHHHHHH----HhCCHH--HHHHHHHHHhc
Confidence 23333332 589995 45677777764
No 49
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=4.7e-33 Score=314.67 Aligned_cols=371 Identities=18% Similarity=0.201 Sum_probs=246.6
Q ss_pred EEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHC--CCceeecceEEEccCCCCCCC------ccCcc
Q 003987 281 VVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQ--GLDISPKILIVTRLIPDAKGT------TCNQR 352 (781)
Q Consensus 281 I~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~--GheV~~~v~VvT~~~p~~~~~------~~~~~ 352 (781)
|+++.|+.- ..||.++.+++-|++| .++ ||+|+ |+|......... .|- .
T Consensus 3 ~~f~hp~~~----------~ggg~ervl~~a~~~l--------~~~~~~~~v~----i~t~~~~~~~~~~l~~~~~~f-~ 59 (419)
T cd03806 3 VGFFHPYCN----------AGGGGERVLWCAVRAL--------QKRYPNNIVV----IYTGDLDATPEEILEKVESRF-N 59 (419)
T ss_pred EEEECCCCC----------CCCCchHHHHHHHHHH--------HHhCCCcEEE----EECCCCCCCHHHHHHHHHHhc-C
Confidence 677765442 3469999999777665 445 88998 999885442100 010 1
Q ss_pred eeeecCCCCeEEEEec-cCCCcccccccccccCchhh---HHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHH
Q 003987 353 LERVSGTEHTHILRVP-FRSEKGILRQWISRFDVWPY---LETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLA 426 (781)
Q Consensus 353 ~e~v~~~~~~~I~rvp-~~~~~~~~~~~isr~~i~~y---l~~f~~~~~~~i~~~~~~kpDIIh~~~~~~--~lva~lla 426 (781)
.+. . .+..++++. .+. |+++ ..|+. +-.+...+...+......+||||+.+...+ ..++.
T Consensus 60 ~~~-~--~~~~~~~~~~~~~-------~~~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~~~--- 125 (419)
T cd03806 60 IEL-D--RPRIVFFLLKYRK-------LVEA-STYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPLVR--- 125 (419)
T ss_pred eec-C--CCceEEEEeccee-------eecc-ccCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHH---
Confidence 111 1 234444442 111 2222 12222 122333333333333244899999886443 22222
Q ss_pred HHcCCcEEEEecCCcccCCCCCh--h-------------hHh----hhhccccchhhhhHHHHHHhhCCEEEecCHHHHh
Q 003987 427 YKMGITQCTIAHALEKTKYPDSD--I-------------YWK----KFDEKYHFSCQFTADLIAMNNADFIITSTYQEIA 487 (781)
Q Consensus 427 r~~gvp~v~t~H~l~~~k~~~s~--~-------------~~k----~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~ 487 (781)
...++|++..+| ++..-.+.- . ..+ .....|+.. ....+...++.||.||++|....+
T Consensus 126 ~~~~~~~i~y~h--~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~-~~~~~~~~~~~aD~ii~~S~~~~~ 202 (419)
T cd03806 126 LLGGCPVGAYVH--YPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRL-FAFLYGLAGSFADVVMVNSTWTRN 202 (419)
T ss_pred HhcCCeEEEEec--CCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHH-HHHHHHHHhhcCCEEEECCHHHHH
Confidence 224889999999 331000000 0 000 000011100 112466788999999999987655
Q ss_pred hccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCC
Q 003987 488 GTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTL 567 (781)
Q Consensus 488 ~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l 567 (781)
.+++.. +. ..++.||+||+|.+.|.+.... .
T Consensus 203 ~~~~~~-------------------~~---~~~~~vi~~gvd~~~~~~~~~~--------------------------~- 233 (419)
T cd03806 203 HIRSLW-------------------KR---NTKPSIVYPPCDVEELLKLPLD--------------------------E- 233 (419)
T ss_pred HHHHHh-------------------Cc---CCCcEEEcCCCCHHHhcccccc--------------------------c-
Confidence 322210 11 2488999999998766543210 0
Q ss_pred CCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCC-----CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003987 568 SDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE-----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (781)
Q Consensus 568 ~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~-----~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~ 642 (781)
..++++|+|+||+.+.||++.+++|++++.+..+ +++|+|+|++... ++.++.+.++++++++++.++
T Consensus 234 -~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~------~~~~~~~~L~~~~~~l~l~~~ 306 (419)
T cd03806 234 -KTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNE------DDEKRVEDLKLLAKELGLEDK 306 (419)
T ss_pred -ccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCc------ccHHHHHHHHHHHHHhCCCCe
Confidence 2456789999999999999999999999987654 4999999998651 223467789999999999999
Q ss_pred EEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccc-ccccc---cCCeEEEECCCCH
Q 003987 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP-AEIIE---HGASGFHIDPYHP 718 (781)
Q Consensus 643 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~-~EiI~---dg~~G~lv~p~d~ 718 (781)
|.|+| .++.+++..+|+. +|++|+|+..|+||++++||||||+|||+++.||+ .|++. ++.+|++++ |+
T Consensus 307 V~f~g----~v~~~~l~~~l~~-adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~ 379 (419)
T cd03806 307 VEFVV----NAPFEELLEELST-ASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TA 379 (419)
T ss_pred EEEec----CCCHHHHHHHHHh-CeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CH
Confidence 99999 6788999999995 99999999999999999999999999999999886 47887 899999985 99
Q ss_pred HHHHHHHHHHHHhccCC-HHHHHHHHHHHHHHHHHhcCcchh
Q 003987 719 DQAAELMADFFGKCKEN-PSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 719 ~~lA~~I~~~l~~l~~d-p~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
+++|++|.+++ ++ ++.++.+ .++++++.++|||+++
T Consensus 380 ~~la~ai~~ll----~~~~~~~~~~-~~~~~~~~~~fs~~~f 416 (419)
T cd03806 380 EEYAEAIEKIL----SLSEEERLRI-RRAARSSVKRFSDEEF 416 (419)
T ss_pred HHHHHHHHHHH----hCCHHHHHHH-HHHHHHHHHhhCHHHh
Confidence 99999999888 54 4455555 5555667799999875
No 50
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=100.00 E-value=3.5e-32 Score=290.58 Aligned_cols=345 Identities=17% Similarity=0.246 Sum_probs=249.5
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||++++++.. + .||...++. +|+++|.++||+|+ +++....... .. ...
T Consensus 1 kI~i~~~~~~---------~-~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~------~~---~~~ 49 (348)
T cd03820 1 KILFVIPSLG---------N-AGGAERVLS--------NLANALAEKGHEVT----IISLDKGEPP------FY---ELD 49 (348)
T ss_pred CeEEEecccc---------C-CCChHHHHH--------HHHHHHHhCCCeEE----EEecCCCCCC------cc---ccC
Confidence 6888986544 2 689999998 77778899999999 8876643300 00 011
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcC-CcEEEEec
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMG-ITQCTIAH 438 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~g-vp~v~t~H 438 (781)
.++.+..++...... .+.+. .+...+.+.+. ..+||+||+++.. ....+.....+ +|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~----------~~~~~-~~~~~~~~~l~---~~~~d~i~~~~~~--~~~~~~~~~~~~~~~i~~~~ 113 (348)
T cd03820 50 PKIKVIDLGDKRDSK----------LLARF-KKLRRLRKLLK---NNKPDVVISFLTS--LLTFLASLGLKIVKLIVSEH 113 (348)
T ss_pred Cccceeecccccccc----------hhccc-cchHHHHHhhc---ccCCCEEEEcCch--HHHHHHHHhhccccEEEecC
Confidence 234555554432110 00000 11112222332 2499999999877 22233333445 49999999
Q ss_pred CCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003987 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~ 518 (781)
+....... ...+. ......++.+|.+++.|...... + .....
T Consensus 114 ~~~~~~~~--~~~~~------------~~~~~~~~~~d~ii~~s~~~~~~-------~-----------------~~~~~ 155 (348)
T cd03820 114 NSPDAYKK--RLRRL------------LLRRLLYRRADAVVVLTEEDRAL-------Y-----------------YKKFN 155 (348)
T ss_pred CCccchhh--hhHHH------------HHHHHHHhcCCEEEEeCHHHHHH-------h-----------------hccCC
Confidence 75432110 00000 02456788999999999876310 0 01225
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003987 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.++|||+|...+.+. ...+++.++++|++.+.||++.+++++.++.
T Consensus 156 ~~~~vi~~~~~~~~~~~~-------------------------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~ 204 (348)
T cd03820 156 KNVVVIPNPLPFPPEEPS-------------------------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIA 204 (348)
T ss_pred CCeEEecCCcChhhcccc-------------------------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHH
Confidence 789999999998654332 0345778999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCC
Q 003987 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (781)
Q Consensus 599 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 678 (781)
+..++++|+|+|++.. ...+.++++++++.++|.+.|. .+++..+++. +|++++||.+|+|
T Consensus 205 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-ad~~i~ps~~e~~ 265 (348)
T cd03820 205 KKHPDWKLRIVGDGPE------------REALEALIKELGLEDRVILLGF------TKNIEEYYAK-ASIFVLTSRFEGF 265 (348)
T ss_pred hcCCCeEEEEEeCCCC------------HHHHHHHHHHcCCCCeEEEcCC------cchHHHHHHh-CCEEEeCcccccc
Confidence 8889999999999876 5667778899999999999994 4688899995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCcc-ccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcc
Q 003987 679 GLTVVEAMTCGLPTFATCHG-GPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVS 757 (781)
Q Consensus 679 GltvlEAMa~GlPVVaT~~g-G~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~ 757 (781)
|++++|||+||+|||+|+.+ +..+++.++.+|+++++.|+++++++|.+++ .||+.+++|++++++.+ ++|+|+
T Consensus 266 ~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~ 340 (348)
T cd03820 266 PMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLM----EDEELRKRMGANARESA-ERFSIE 340 (348)
T ss_pred CHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-HHhCHH
Confidence 99999999999999999865 5677888778999999999999999998887 89999999999996655 889996
Q ss_pred hhhhccchH
Q 003987 758 SDGIVDPSP 766 (781)
Q Consensus 758 ~~~il~~ye 766 (781)
+ +++.|+
T Consensus 341 ~--~~~~~~ 347 (348)
T cd03820 341 N--IIKQWE 347 (348)
T ss_pred H--HHHHhc
Confidence 5 444443
No 51
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=100.00 E-value=1.5e-32 Score=300.07 Aligned_cols=342 Identities=17% Similarity=0.201 Sum_probs=243.1
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecC
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~ 358 (781)
|||++++... ..||.++++. .+++.|.++||+|+ +++....
T Consensus 1 MkIl~~~~~~-----------~~gG~~~~~~--------~l~~~l~~~G~~v~----v~~~~~~---------------- 41 (365)
T cd03825 1 MKVLHLNTSD-----------ISGGAARAAY--------RLHRALQAAGVDST----MLVQEKK---------------- 41 (365)
T ss_pred CeEEEEecCC-----------CCCcHHHHHH--------HHHHHHHhcCCcee----EEEeecc----------------
Confidence 7999998532 2589999999 67777899999999 8864411
Q ss_pred CCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc--CCcEEEE
Q 003987 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM--GITQCTI 436 (781)
Q Consensus 359 ~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~--gvp~v~t 436 (781)
. +.+.+. ..+|||||.|+.....+......+. ++|.|++
T Consensus 42 ------------~------------------------~~~~~~---~~~~diih~~~~~~~~~~~~~~~~~~~~~~~v~~ 82 (365)
T cd03825 42 ------------A------------------------LISKIE---IINADIVHLHWIHGGFLSIEDLSKLLDRKPVVWT 82 (365)
T ss_pred ------------h------------------------hhhChh---cccCCEEEEEccccCccCHHHHHHHHcCCCEEEE
Confidence 0 001111 2389999999876654444444444 9999999
Q ss_pred ecCCcccCCC----CC-hhhHhh-----hhcccc---chhhhh-H-HHHHHhhCCEEEecCHHHHhhccccccccccccc
Q 003987 437 AHALEKTKYP----DS-DIYWKK-----FDEKYH---FSCQFT-A-DLIAMNNADFIITSTYQEIAGTKNTVGQYESHTA 501 (781)
Q Consensus 437 ~H~l~~~k~~----~s-~~~~k~-----~~~~y~---f~~~~~-~-e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~ 501 (781)
+|+....... .. ..++.. ....+. +..+.. . .......++.++++|....+...+.
T Consensus 83 ~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~--------- 153 (365)
T cd03825 83 LHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRWLADCARSS--------- 153 (365)
T ss_pred cccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEehhHHHHHHHHhc---------
Confidence 9986543210 00 000000 000000 011110 0 1112245677888886554421111
Q ss_pred cccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeec
Q 003987 502 FTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARL 581 (781)
Q Consensus 502 f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL 581 (781)
......++.++|||+|.+.|.|......+ ..+++ +++++++++.|+.
T Consensus 154 ------------~~~~~~~~~vi~ngi~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~~~~ 200 (365)
T cd03825 154 ------------SLFKGIPIEVIPNGIDTTIFRPRDKREAR-------------------KRLGL--PADKKIILFGAVG 200 (365)
T ss_pred ------------cccCCCceEEeCCCCcccccCCCcHHHHH-------------------HHhCC--CCCCeEEEEEecC
Confidence 11225799999999999988765443221 22444 4566777777777
Q ss_pred cC--CCChHHHHHHHHHhhcc-CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCC-hHH
Q 003987 582 DH--VKNMTGLVECYGKNSQL-RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRAR-NGE 657 (781)
Q Consensus 582 ~~--~Kgl~~LieA~~~l~~~-~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~-~~e 657 (781)
.. .||++.++++++.+.+. .+++.++++|++... .. .++..+|.|+|+ ++ .++
T Consensus 201 ~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~------------~~-------~~~~~~v~~~g~----~~~~~~ 257 (365)
T cd03825 201 GTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPE------------IP-------PDLPFPVHYLGS----LNDDES 257 (365)
T ss_pred CCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchh------------hh-------ccCCCceEecCC----cCCHHH
Confidence 65 89999999999998764 578999999998651 01 145678999994 44 678
Q ss_pred HHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHH
Q 003987 658 LYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPS 737 (781)
Q Consensus 658 l~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~ 737 (781)
+..+++. +|++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|+++++++|.+++ .|++
T Consensus 258 ~~~~~~~-ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~----~~~~ 332 (365)
T cd03825 258 LALIYSA-ADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLL----ADPD 332 (365)
T ss_pred HHHHHHh-CCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHH----hCHH
Confidence 8899995 9999999999999999999999999999999999999999999999999999999999998887 7999
Q ss_pred HHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 738 HWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 738 ~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
.++++++++++.+.++|||+. +++.|.++++
T Consensus 333 ~~~~~~~~~~~~~~~~~s~~~--~~~~~~~~y~ 363 (365)
T cd03825 333 EREELGEAARELAENEFDSRV--QAKRYLSLYE 363 (365)
T ss_pred HHHHHHHHHHHHHHHhcCHHH--HHHHHHHHHh
Confidence 999999999999999999965 4466776664
No 52
>PLN02949 transferase, transferring glycosyl groups
Probab=100.00 E-value=2.4e-32 Score=311.44 Aligned_cols=398 Identities=18% Similarity=0.210 Sum_probs=253.4
Q ss_pred cCCCCceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcc
Q 003987 273 GRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQR 352 (781)
Q Consensus 273 ~r~p~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~ 352 (781)
+|....++|+++.|+.- ..||.++.+++-|++ |.++|++++ |.|+|..... .. .+.
T Consensus 28 ~~~~~~~~v~f~HP~~~----------~ggG~ERvl~~a~~~--------l~~~~~~~~--v~iyt~~~d~-~~---~~~ 83 (463)
T PLN02949 28 ARRSRKRAVGFFHPYTN----------DGGGGERVLWCAVRA--------IQEENPDLD--CVIYTGDHDA-SP---DSL 83 (463)
T ss_pred cccCCCcEEEEECCCCC----------CCCChhhHHHHHHHH--------HHhhCCCCe--EEEEcCCCCC-CH---HHH
Confidence 34445578999966542 346999999966665 467788544 3377765221 11 111
Q ss_pred eeeecCCCCeEE----EEeccCCCcccccccccccCchhhH---HHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHH
Q 003987 353 LERVSGTEHTHI----LRVPFRSEKGILRQWISRFDVWPYL---ETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLL 425 (781)
Q Consensus 353 ~e~v~~~~~~~I----~rvp~~~~~~~~~~~isr~~i~~yl---~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~ll 425 (781)
+......-++.+ ..+..+ .++|+++ ..|+++ -.....+...+.......||+++-....+ ....+
T Consensus 84 l~~~~~~~~i~~~~~~~~v~l~-----~~~~~~~-~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~--~~~pl 155 (463)
T PLN02949 84 AARARDRFGVELLSPPKVVHLR-----KRKWIEE-ETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYA--FTYPL 155 (463)
T ss_pred HHHHHhhcceecCCCceEEEec-----ccccccc-ccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcc--cHHHH
Confidence 111111112211 111110 1245543 344442 12222222222222223666555332212 12223
Q ss_pred HHHcCCcEEEEecCCcccC------------CCC----ChhhH-hhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhh
Q 003987 426 AYKMGITQCTIAHALEKTK------------YPD----SDIYW-KKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAG 488 (781)
Q Consensus 426 ar~~gvp~v~t~H~l~~~k------------~~~----s~~~~-k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~ 488 (781)
++..++|++...|-..... +.. ....+ ......|+.... ..+....+.||.|+++|....+.
T Consensus 156 ~~~~~~~v~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~-~l~~~~~~~ad~ii~nS~~t~~~ 234 (463)
T PLN02949 156 ARLFGCKVVCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFA-WMYGLVGRCAHLAMVNSSWTKSH 234 (463)
T ss_pred HHhcCCcEEEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHH-HHHHHHcCCCCEEEECCHHHHHH
Confidence 4456899999999432111 000 00000 001111211111 13445678999999999877553
Q ss_pred ccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCC
Q 003987 489 TKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLS 568 (781)
Q Consensus 489 ~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~ 568 (781)
+++.. +. ..++.+++||+|.+.+...+.. .
T Consensus 235 l~~~~-------------------~~---~~~i~vvyp~vd~~~~~~~~~~----------------------------~ 264 (463)
T PLN02949 235 IEALW-------------------RI---PERIKRVYPPCDTSGLQALPLE----------------------------R 264 (463)
T ss_pred HHHHc-------------------CC---CCCeEEEcCCCCHHHcccCCcc----------------------------c
Confidence 32210 11 3478899999997654221100 0
Q ss_pred CCCCCEEEEEeeccCCCChHHHHHHHHHhhc----cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003987 569 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQ----LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (781)
Q Consensus 569 ~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~----~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~ 644 (781)
+.++++++++||+.+.||++.+++|++++.+ ..++++|+|+|+++. .++.++.++++++++++++.++|.
T Consensus 265 ~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~------~~~~~~~~eL~~la~~l~L~~~V~ 338 (463)
T PLN02949 265 SEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRN------KEDEERLQKLKDRAKELGLDGDVE 338 (463)
T ss_pred cCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCC------cccHHHHHHHHHHHHHcCCCCcEE
Confidence 2346789999999999999999999998754 246899999999854 122345678999999999999999
Q ss_pred EeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccc-ccccc---CCeEEEECCCCHHH
Q 003987 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPA-EIIEH---GASGFHIDPYHPDQ 720 (781)
Q Consensus 645 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~-EiI~d---g~~G~lv~p~d~~~ 720 (781)
|+| .++.+++..+|+. ++++|+||..|+||++++|||+||+|||+++.||+. |+|.+ |.+|++++ |+++
T Consensus 339 f~g----~v~~~el~~ll~~-a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~ 411 (463)
T PLN02949 339 FHK----NVSYRDLVRLLGG-AVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEE 411 (463)
T ss_pred EeC----CCCHHHHHHHHHh-CcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--CHHH
Confidence 999 6778899999995 999999999999999999999999999999999975 77765 67899985 9999
Q ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh--hhccchHHHHH
Q 003987 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD--GIVDPSPFVIN 770 (781)
Q Consensus 721 lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~--~il~~ye~ll~ 770 (781)
+|++|.++++ .+++.+++|+++|++++ ++|||+++ .+.+.+.++++
T Consensus 412 la~ai~~ll~---~~~~~r~~m~~~ar~~~-~~FS~e~~~~~~~~~i~~l~~ 459 (463)
T PLN02949 412 YADAILEVLR---MRETERLEIAAAARKRA-NRFSEQRFNEDFKDAIRPILN 459 (463)
T ss_pred HHHHHHHHHh---CCHHHHHHHHHHHHHHH-HHcCHHHHHHHHHHHHHHHHh
Confidence 9999998872 36888999999999999 67999876 44444444443
No 53
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=100.00 E-value=7.5e-32 Score=288.02 Aligned_cols=351 Identities=18% Similarity=0.216 Sum_probs=251.0
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++++... .||...++. +|++.|.++||+|. +++............ ...
T Consensus 1 kIl~~~~~~~-----------~gG~~~~~~--------~l~~~l~~~g~~v~----v~~~~~~~~~~~~~~------~~~ 51 (353)
T cd03811 1 KILFVIPSLG-----------GGGAERVLL--------NLANGLDKRGYDVT----LVVLRDEGDYLELLP------SNV 51 (353)
T ss_pred CeEEEeeccc-----------CCCcchhHH--------HHHHHHHhcCceEE----EEEcCCCCccccccc------cch
Confidence 6888886432 589999999 77778899999999 887664332111000 000
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCC-CchHHHHHHHHHcCCcEEEEec
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYS-DGNLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~-~~~lva~llar~~gvp~v~t~H 438 (781)
............ ...+ .+...+.+.+.. .+||+||++.. ...+.+.+.++. ++|.+++.|
T Consensus 52 ~~~~~~~~~~~~-----------~~~~----~~~~~~~~~~~~---~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~ 112 (353)
T cd03811 52 KLIPVRVLKLKS-----------LRDL----LAILRLRRLLRK---EKPDVVISHLTTTPNVLALLAARL-GTKLIVWEH 112 (353)
T ss_pred hhhceeeeeccc-----------ccch----hHHHHHHHHHHh---cCCCEEEEcCccchhHHHHHHhhc-CCceEEEEc
Confidence 000001100000 0111 112223333333 38999999998 555555555544 899999999
Q ss_pred CCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003987 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~ 518 (781)
+............+ ......++.+|.+++.|....+...+. .+. ..
T Consensus 113 ~~~~~~~~~~~~~~-------------~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~~~--~~ 158 (353)
T cd03811 113 NSLSLELKRKLRLL-------------LLIRKLYRRADKIVAVSEGVKEDLLKL-------------------LGI--PP 158 (353)
T ss_pred CcchhhhccchhHH-------------HHHHhhccccceEEEeccchhhhHHHh-------------------hcC--Cc
Confidence 87553321111000 124467889999999998765421111 111 14
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003987 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.+||||+|.+.+.+...... ..+. +.++++|+++||+.+.||++.+++++.++.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~---------------------~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~ 215 (353)
T cd03811 159 DKIEVIYNPIDIEEIRALAEEPL---------------------ELGI--PPDGPVILAVGRLSPQKGFDTLIRAFALLR 215 (353)
T ss_pred cccEEecCCcChhhcCcccchhh---------------------hcCC--CCCceEEEEEecchhhcChHHHHHHHHHhh
Confidence 68999999999887765432211 0122 456788999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCC
Q 003987 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (781)
Q Consensus 599 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 678 (781)
+..++++|+++|+++. .+.+.++++++++.++|.|.|... ++..+++. +|++|+||.+|+|
T Consensus 216 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g~~~------~~~~~~~~-~d~~i~ps~~e~~ 276 (353)
T cd03811 216 KEGPDARLVILGDGPL------------REELEALAKELGLADRVHFLGFQS------NPYPYLKA-ADLFVLSSRYEGF 276 (353)
T ss_pred hcCCCceEEEEcCCcc------------HHHHHHHHHhcCCCccEEEecccC------CHHHHHHh-CCEEEeCcccCCC
Confidence 8778999999999876 566778899999999999999532 46778885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcC
Q 003987 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLV 755 (781)
Q Consensus 679 GltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ys 755 (781)
|++++|||+||+|||+|+.||..|++.++.+|++++++|.+++++.+..+ ..+..+++.++++++++++.+.++|+
T Consensus 277 ~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 277 PNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALAL-LDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred CcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHH-HhccCChHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999996544433 45668999999999999999999886
No 54
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=100.00 E-value=8.5e-32 Score=290.82 Aligned_cols=353 Identities=15% Similarity=0.189 Sum_probs=244.0
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||++++++..| ..+||.+.++. .|+++|.++||+|+ +++............
T Consensus 1 kIl~i~~~~~~--------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~~--------- 51 (359)
T cd03823 1 RILVVNHLYPP--------RSVGGAEVVAH--------DLAEALAKRGHEVA----VLTAGEDPPRQDKEV--------- 51 (359)
T ss_pred CeeEEcccCCc--------ccccchHHHHH--------HHHHHHHhcCCceE----EEeCCCCCCCccccc---------
Confidence 68999965543 34799999999 67777889999999 887653322111000
Q ss_pred CCeEEEEecc--CCCcccccccccccCchhhH-HHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEE
Q 003987 360 EHTHILRVPF--RSEKGILRQWISRFDVWPYL-ETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCT 435 (781)
Q Consensus 360 ~~~~I~rvp~--~~~~~~~~~~isr~~i~~yl-~~f~~~~~~~i~~~~~~kpDIIh~~~~~~-~lva~llar~~gvp~v~ 435 (781)
.+..+...+. ....... ........+. ......+.+.+.. .+||+||+|.... .......++..++|+++
T Consensus 52 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~ 125 (359)
T cd03823 52 IGVVVYGRPIDEVLRSALP---RDLFHLSDYDNPAVVAEFARLLED---FRPDVVHFHHLQGLGVSILRAARDRGIPIVL 125 (359)
T ss_pred ccceeeccccccccCCCch---hhhhHHHhccCHHHHHHHHHHHHH---cCCCEEEECCccchHHHHHHHHHhcCCCEEE
Confidence 0111111110 0000000 0000000010 1122223333333 4899999998754 34445567778999999
Q ss_pred EecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCC
Q 003987 436 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 515 (781)
Q Consensus 436 t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~ 515 (781)
+.|+.+..... . .......|.++++|....+...+. +..
T Consensus 126 ~~hd~~~~~~~------~---------------~~~~~~~d~ii~~s~~~~~~~~~~--------------------~~~ 164 (359)
T cd03823 126 TLHDYWLICPR------Q---------------GLFKKGGDAVIAPSRFLLDRYVAN--------------------GLF 164 (359)
T ss_pred EEeeeeeecch------h---------------hhhccCCCEEEEeCHHHHHHHHHc--------------------CCC
Confidence 99975432210 0 011123399999998765522111 221
Q ss_pred CCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHH
Q 003987 516 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYG 595 (781)
Q Consensus 516 ~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~ 595 (781)
..++.+|+||+|...+.+... +. +.++++|+++||+.+.||++.++++++
T Consensus 165 --~~~~~vi~n~~~~~~~~~~~~--------------------------~~--~~~~~~i~~~G~~~~~k~~~~li~~~~ 214 (359)
T cd03823 165 --AEKISVIRNGIDLDRAKRPRR--------------------------AP--PGGRLRFGFIGQLTPHKGVDLLLEAFK 214 (359)
T ss_pred --ccceEEecCCcChhhcccccc--------------------------CC--CCCceEEEEEecCccccCHHHHHHHHH
Confidence 468999999999877654321 01 356778999999999999999999999
Q ss_pred HhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC-
Q 003987 596 KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF- 674 (781)
Q Consensus 596 ~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~- 674 (781)
++.+ ++++|+++|.+.. ........ +..++|.++| .++.+++..+++. +|++++||.
T Consensus 215 ~l~~--~~~~l~i~G~~~~------------~~~~~~~~---~~~~~v~~~g----~~~~~~~~~~~~~-ad~~i~ps~~ 272 (359)
T cd03823 215 RLPR--GDIELVIVGNGLE------------LEEESYEL---EGDPRVEFLG----AYPQEEIDDFYAE-IDVLVVPSIW 272 (359)
T ss_pred HHHh--cCcEEEEEcCchh------------hhHHHHhh---cCCCeEEEeC----CCCHHHHHHHHHh-CCEEEEcCcc
Confidence 9876 7899999999876 11111111 5668899999 6668899999995 999999997
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc
Q 003987 675 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERL 754 (781)
Q Consensus 675 ~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~y 754 (781)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|.++++++|.+++ +|++.+++++++++++...
T Consensus 273 ~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~-- 346 (359)
T cd03823 273 PENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLI----DDPDLLERLRAGIEPPRSI-- 346 (359)
T ss_pred cCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHH----hChHHHHHHHHhHHHhhhH--
Confidence 7999999999999999999999999999999999999999999999999998887 7999999999999887743
Q ss_pred CcchhhhccchHHHHH
Q 003987 755 VVSSDGIVDPSPFVIN 770 (781)
Q Consensus 755 sw~~~~il~~ye~ll~ 770 (781)
..+++.|++++.
T Consensus 347 ----~~~~~~~~~~~~ 358 (359)
T cd03823 347 ----EDQAEEYLKLYR 358 (359)
T ss_pred ----HHHHHHHHHHhh
Confidence 455566766653
No 55
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=100.00 E-value=1.2e-31 Score=287.77 Aligned_cols=351 Identities=17% Similarity=0.228 Sum_probs=254.2
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++++. .||...++. .|++.|.++||+|+ +++....... ....
T Consensus 1 kIl~i~~~-------------~~g~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~----------~~~~ 45 (359)
T cd03808 1 KILHIVTV-------------DGGLYSFRL--------PLIKALRAAGYEVH----VVAPPGDELE----------ELEA 45 (359)
T ss_pred CeeEEEec-------------chhHHHHHH--------HHHHHHHhcCCeeE----EEecCCCccc----------cccc
Confidence 67888754 368888888 77778899999999 8876633211 0112
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHH-HcCCcEEEEec
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAY-KMGITQCTIAH 438 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar-~~gvp~v~t~H 438 (781)
.++.++.+|..... .+ .+..+. ....+.+.+. ..+||+||++...+...+.+.++ ..+.+++.+.|
T Consensus 46 ~~~~~~~~~~~~~~------~~---~~~~~~-~~~~~~~~~~---~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (359)
T cd03808 46 LGVKVIPIPLDRRG------IN---PFKDLK-ALLRLYRLLR---KERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVH 112 (359)
T ss_pred CCceEEeccccccc------cC---hHhHHH-HHHHHHHHHH---hcCCCEEEEccccchhHHHHHHHHcCCCCEEEEec
Confidence 25667777655411 11 111111 1122233333 34899999998877777777776 45567777888
Q ss_pred CCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003987 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~ 518 (781)
+........ ....+ .+. ..+...++.+|.+++.|........+. .+.+ ..
T Consensus 113 ~~~~~~~~~-~~~~~----~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~~~~-~~ 162 (359)
T cd03808 113 GLGFVFTSG-GLKRR----LYL-----LLERLALRFTDKVIFQNEDDRDLALKL-------------------GIIK-KK 162 (359)
T ss_pred Ccchhhccc-hhHHH----HHH-----HHHHHHHhhccEEEEcCHHHHHHHHHh-------------------cCCC-cC
Confidence 754432111 11111 111 234567788999999998776522111 1111 13
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003987 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.++++|+|.+.+.+.... .+.++++|+++|++.+.||++.+++++..+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~ 214 (359)
T cd03808 163 KTVLIPGSGVDLDRFSPSPEP----------------------------IPEDDPVFLFVARLLKDKGIDELLEAARILK 214 (359)
T ss_pred ceEEecCCCCChhhcCccccc----------------------------cCCCCcEEEEEeccccccCHHHHHHHHHHHH
Confidence 567788999998766543210 0346789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHH-HHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCC
Q 003987 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHE-LMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (781)
Q Consensus 599 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~-li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 677 (781)
+..++++|+|+|++... ..... ++.+++..++|+|+|. .+++..+++. +|++++||..|+
T Consensus 215 ~~~~~~~l~i~G~~~~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~i~ps~~e~ 275 (359)
T cd03808 215 AKGPNVRLLLVGDGDEE------------NPAAILEIEKLGLEGRVEFLGF------RDDVPELLAA-ADVFVLPSYREG 275 (359)
T ss_pred hcCCCeEEEEEcCCCcc------------hhhHHHHHHhcCCcceEEEeec------cccHHHHHHh-ccEEEecCcccC
Confidence 77889999999999761 11111 3667778889999995 3468888885 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcc
Q 003987 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVS 757 (781)
Q Consensus 678 fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~ 757 (781)
||++++|||+||+|||+|+.++..|++.++.+|++++++|+++++++|.+++ .|++.++++++++++++.++|||+
T Consensus 276 ~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 351 (359)
T cd03808 276 LPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLI----EDPELRARMGQAARKRAEEEFDEE 351 (359)
T ss_pred cchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHH
Confidence 9999999999999999999999999999999999999999999999998876 899999999999999999999997
Q ss_pred hh
Q 003987 758 SD 759 (781)
Q Consensus 758 ~~ 759 (781)
..
T Consensus 352 ~~ 353 (359)
T cd03808 352 IV 353 (359)
T ss_pred HH
Confidence 64
No 56
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=100.00 E-value=3.2e-32 Score=295.70 Aligned_cols=359 Identities=19% Similarity=0.230 Sum_probs=252.4
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+|++.+..++ ..||++.|+. +|+++|.+.||+|+ +++............ ...
T Consensus 1 ~ili~~~~~~~~--------~~gG~~~~~~--------~l~~~L~~~~~~v~----~~~~~~~~~~~~~~~-----~~~- 54 (365)
T cd03809 1 RILIDARFLASR--------RPTGIGRYAR--------ELLRALLKLDPEEV----LLLLPGAPGLLLLPL-----RAA- 54 (365)
T ss_pred CEEEechhhhcC--------CCCcHHHHHH--------HHHHHHHhcCCceE----EEEecCccccccccc-----hhc-
Confidence 688888665521 5799999999 77778899999999 777663322111000 000
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~ 439 (781)
... . ... .....+.............+. ..+||+||+++...... +..++|+++++|+
T Consensus 55 --~~~--~-~~~---------~~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~-----~~~~~~~i~~~hd 112 (365)
T cd03809 55 --LRL--L-LRL---------PRRLLWGLLFLLRAGDRLLLL---LLGLDLLHSPHNTAPLL-----RLRGVPVVVTIHD 112 (365)
T ss_pred --ccc--c-ccc---------ccccccchhhHHHHHHHHHhh---hcCCCeeeecccccCcc-----cCCCCCEEEEecc
Confidence 000 0 000 001111111111111111222 24899999998776444 6679999999998
Q ss_pred CcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003987 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (781)
Q Consensus 440 l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~ 519 (781)
+............ ....+ .......++.+|.+++.|...++.+.+. .++ ...
T Consensus 113 ~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~d~~i~~s~~~~~~~~~~-------------------~~~--~~~ 164 (365)
T cd03809 113 LIPLRFPEYFSPG--FRRYF-----RRLLRRALRRADAIITVSEATKRDLLRY-------------------LGV--PPD 164 (365)
T ss_pred chhhhCcccCCHH--HHHHH-----HHHHHHHHHHcCEEEEccHHHHHHHHHH-------------------hCc--CHH
Confidence 7654433211111 00011 1234568899999999998766532211 111 256
Q ss_pred ceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhc
Q 003987 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (781)
Q Consensus 520 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~ 599 (781)
++.++|||+|...+.+..... +.. ... ..++++|+++||+.+.||++.+++++.++.+
T Consensus 165 ~~~vi~~~~~~~~~~~~~~~~-~~~-------------------~~~--~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~ 222 (365)
T cd03809 165 KIVVIPLGVDPRFRPPPAEAE-VLR-------------------ALY--LLPRPYFLYVGTIEPRKNLERLLEAFARLPA 222 (365)
T ss_pred HEEeeccccCccccCCCchHH-HHH-------------------Hhc--CCCCCeEEEeCCCccccCHHHHHHHHHHHHH
Confidence 899999999998876654332 100 111 4567899999999999999999999999998
Q ss_pred cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCc
Q 003987 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFG 679 (781)
Q Consensus 600 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fG 679 (781)
..++++|+++|.+... .......+++.++.++|.|+| .++.+++..+++. +|++++||.+|+||
T Consensus 223 ~~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~ps~~e~~~ 286 (365)
T cd03809 223 KGPDPKLVIVGKRGWL-----------NEELLARLRELGLGDRVRFLG----YVSDEELAALYRG-ARAFVFPSLYEGFG 286 (365)
T ss_pred hcCCCCEEEecCCccc-----------cHHHHHHHHHcCCCCeEEECC----CCChhHHHHHHhh-hhhhcccchhccCC
Confidence 7778999999987651 112223336778889999999 6677899999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 680 LTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 680 ltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
++++|||++|+|||+|+.|+..|++. .+|++++++|.++++++|.+++ .|++.+.++++++++.+ ++|||++.
T Consensus 287 ~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~sw~~~ 359 (365)
T cd03809 287 LPVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALAAAIERLL----EDPALREELRERGLARA-KRFSWEKT 359 (365)
T ss_pred CCHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHH-HhCCHHHH
Confidence 99999999999999999999999984 5699999999999999998876 89999999999999655 88999775
No 57
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=100.00 E-value=4.7e-31 Score=283.96 Aligned_cols=362 Identities=21% Similarity=0.287 Sum_probs=261.5
Q ss_pred cccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccc
Q 003987 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWI 380 (781)
Q Consensus 301 ~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~i 380 (781)
.||...++. .+++.|.+.||+|+ |++............ ... .....+.... ...+.
T Consensus 13 ~~g~~~~~~--------~~~~~l~~~g~~v~----v~~~~~~~~~~~~~~------~~~---~~~~~~~~~~---~~~~~ 68 (377)
T cd03798 13 NGGGGIFVK--------ELARALAKRGVEVT----VLAPGPWGPKLLDLL------KGR---LVGVERLPVL---LPVVP 68 (377)
T ss_pred CchHHHHHH--------HHHHHHHHCCCceE----EEecCCCCCCchhhc------ccc---cccccccccC---cchhh
Confidence 588888988 77788899999999 887664332111000 000 0000000000 00000
Q ss_pred cccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccc
Q 003987 381 SRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKY 459 (781)
Q Consensus 381 sr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y 459 (781)
... .......+...+.+.+.. ...+||+||+++... .+.+..+++..++|++.+.|+..........
T Consensus 69 ~~~-~~~~~~~~~~~~~~~l~~-~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~---------- 136 (377)
T cd03798 69 LLK-GPLLYLLAARALLKLLKL-KRFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR---------- 136 (377)
T ss_pred ccc-cchhHHHHHHHHHHHHhc-ccCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh----------
Confidence 000 111112333333444431 145999999997665 6677788888899999999986554322111
Q ss_pred cchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHH
Q 003987 460 HFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK 539 (781)
Q Consensus 460 ~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~ 539 (781)
.........++.+|.+++.|....+...+. + .+..++.++|||+|...+.+....
T Consensus 137 ---~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--------------------~--~~~~~~~~i~~~~~~~~~~~~~~~ 191 (377)
T cd03798 137 ---LLRALLRRALRRADAVIAVSEALADELKAL--------------------G--IDPEKVTVIPNGVDTERFSPADRA 191 (377)
T ss_pred ---hHHHHHHHHHhcCCeEEeCCHHHHHHHHHh--------------------c--CCCCceEEcCCCcCcccCCCcchH
Confidence 011223457889999999998776522111 1 226799999999999887765432
Q ss_pred HHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCc
Q 003987 540 QKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSK 619 (781)
Q Consensus 540 ~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~ 619 (781)
.. . ..+. ..+++.++++|++.+.||++.+++++..+.+..++++|+++|.+..
T Consensus 192 ~~--~------------------~~~~--~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~----- 244 (377)
T cd03798 192 EA--R------------------KLGL--PEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPL----- 244 (377)
T ss_pred HH--H------------------hccC--CCCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcc-----
Confidence 21 0 0122 4567889999999999999999999999987778999999999876
Q ss_pred chHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc
Q 003987 620 DREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG 699 (781)
Q Consensus 620 d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG 699 (781)
.+.+.++++++++.++|.+.| .++.+++..+++. +|++++|+..|++|++++|||+||+|||+++.|+
T Consensus 245 -------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~ 312 (377)
T cd03798 245 -------REALEALAAELGLEDRVTFLG----AVPHEEVPAYYAA-ADVFVLPSLREGFGLVLLEAMACGLPVVATDVGG 312 (377)
T ss_pred -------hHHHHHHHHhcCCcceEEEeC----CCCHHHHHHHHHh-cCeeecchhhccCChHHHHHHhcCCCEEEecCCC
Confidence 567778888899999999999 6778899999995 9999999999999999999999999999999999
Q ss_pred cccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 700 PAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 700 ~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
..|++.++.+|++++++|+++++++|.+++ .+++. +++.++++.+.++|+|+. +.+.|.+++.
T Consensus 313 ~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~--~~~~~~~~~~~~~~s~~~--~~~~~~~~~~ 375 (377)
T cd03798 313 IPEIITDGENGLLVPPGDPEALAEAILRLL----ADPWL--RLGRAARRRVAERFSWEN--VAERLLELYR 375 (377)
T ss_pred hHHHhcCCcceeEECCCCHHHHHHHHHHHh----cCcHH--HHhHHHHHHHHHHhhHHH--HHHHHHHHHh
Confidence 999999999999999999999999998887 77776 788899999999999975 4455655554
No 58
>PRK10125 putative glycosyl transferase; Provisional
Probab=100.00 E-value=6.4e-32 Score=303.96 Aligned_cols=278 Identities=15% Similarity=0.082 Sum_probs=188.7
Q ss_pred CCCceEEEEcCCCc---hHHHH------HHHHHcCCcEEEEecCCcccC----CCCChhhHhhhh-----------cccc
Q 003987 405 QGFPDFIIGNYSDG---NLVAS------LLAYKMGITQCTIAHALEKTK----YPDSDIYWKKFD-----------EKYH 460 (781)
Q Consensus 405 ~~kpDIIh~~~~~~---~lva~------llar~~gvp~v~t~H~l~~~k----~~~s~~~~k~~~-----------~~y~ 460 (781)
..+|||||.|...+ ++... +..+..++|+|.|.|+.+... +...-..|+.-. ..+.
T Consensus 92 ~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d 171 (405)
T PRK10125 92 TPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVD 171 (405)
T ss_pred ccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccc
Confidence 45899999998776 33211 112345799999999987542 100000111000 0001
Q ss_pred ch-----hhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCC
Q 003987 461 FS-----CQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFP 535 (781)
Q Consensus 461 f~-----~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p 535 (781)
.+ .+...-....+.++.+|+.|...++.... ..+ ..++.|||||+|.+.+.+
T Consensus 172 ~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~---------------------~~~--~~~i~vI~NGid~~~~~~ 228 (405)
T PRK10125 172 RAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNS---------------------LYG--PGRCRIINNGIDMATEAI 228 (405)
T ss_pred hHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHH---------------------HcC--CCCEEEeCCCcCcccccc
Confidence 11 11111112234578999999876552111 011 468999999999754332
Q ss_pred CcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeec--cCCCChHHHHHHHHHhhccCCCeEEEEEeCcC
Q 003987 536 YSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARL--DHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 613 (781)
Q Consensus 536 ~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL--~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~ 613 (781)
...... .. .++++++|+++|+. .+.||+..|++|+.++. ++++|+|+|+++
T Consensus 229 ~~~~~~----------------------~~--~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~---~~~~L~ivG~g~ 281 (405)
T PRK10125 229 LAELPP----------------------VR--ETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG---DKIELHTFGKFS 281 (405)
T ss_pred cccccc----------------------cc--cCCCCCEEEEEEeccccCCccHHHHHHHHHhCC---CCeEEEEEcCCC
Confidence 211100 00 03467789999994 46899999999998863 479999999875
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEE
Q 003987 614 DVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTF 693 (781)
Q Consensus 614 ~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVV 693 (781)
.. ...+|.++|+.. +..++..+|+. +|+||+||.+|+||++++||||||+|||
T Consensus 282 ~~-----------------------~~~~v~~~g~~~---~~~~l~~~y~~-aDvfV~pS~~Egfp~vilEAmA~G~PVV 334 (405)
T PRK10125 282 PF-----------------------TAGNVVNHGFET---DKRKLMSALNQ-MDALVFSSRVDNYPLILCEALSIGVPVI 334 (405)
T ss_pred cc-----------------------cccceEEecCcC---CHHHHHHHHHh-CCEEEECCccccCcCHHHHHHHcCCCEE
Confidence 40 024688898644 35688899995 9999999999999999999999999999
Q ss_pred EcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHH----HHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 694 ATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKK----ISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 694 aT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~----~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
+|+.||.+|+|.++ +|++++|+|++++|+.+ +++..++ +.+++++++.++|||+. +++.|.+++
T Consensus 335 at~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~---------~~~~~~~~~~~~~~~~r~~~~~~fs~~~--~~~~y~~lY 402 (405)
T PRK10125 335 ATHSDAAREVLQKS-GGKTVSEEEVLQLAQLS---------KPEIAQAVFGTTLAEFSQRSRAAYSGQQ--MLEEYVNFY 402 (405)
T ss_pred EeCCCChHHhEeCC-cEEEECCCCHHHHHhcc---------CHHHHHHhhhhHHHHHHHHHHHhCCHHH--HHHHHHHHH
Confidence 99999999999775 99999999999999854 4444443 34568999999999965 556677766
Q ss_pred Hh
Q 003987 770 NV 771 (781)
Q Consensus 770 ~~ 771 (781)
..
T Consensus 403 ~~ 404 (405)
T PRK10125 403 QN 404 (405)
T ss_pred Hh
Confidence 43
No 59
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=4.3e-32 Score=304.24 Aligned_cols=284 Identities=12% Similarity=0.098 Sum_probs=201.9
Q ss_pred CCCceEEEEcCCCchHHHHHHH-HHcCCcEEEEecCCcccCCCCChhhHh-hhhccccchh--hhhHHHHHHhhCCEEEe
Q 003987 405 QGFPDFIIGNYSDGNLVASLLA-YKMGITQCTIAHALEKTKYPDSDIYWK-KFDEKYHFSC--QFTADLIAMNNADFIIT 480 (781)
Q Consensus 405 ~~kpDIIh~~~~~~~lva~lla-r~~gvp~v~t~H~l~~~k~~~s~~~~k-~~~~~y~f~~--~~~~e~~a~~~AD~IIt 480 (781)
..++|+||+++.... ..+. +..++|.+++.|+++...+........ .....|+... ....+...++.+|.|++
T Consensus 102 ~~~~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~ 178 (397)
T TIGR03087 102 AEPVDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPLRWIYRREGRLLLAYERAIAARFDAATF 178 (397)
T ss_pred hCCCCEEEEeccccc---eeccccccCCCeEeehhhHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHhhCCeEEE
Confidence 358999999875432 2222 356899999999864322110000000 0001111100 01246678899999999
Q ss_pred cCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccc
Q 003987 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (781)
Q Consensus 481 ~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 560 (781)
+|..+.+.+++. .+. ...++.+||||+|.+.|.+.....
T Consensus 179 ~S~~~~~~l~~~-------------------~~~--~~~~v~vipngvd~~~f~~~~~~~-------------------- 217 (397)
T TIGR03087 179 VSRAEAELFRRL-------------------APE--AAGRITAFPNGVDADFFSPDRDYP-------------------- 217 (397)
T ss_pred cCHHHHHHHHHh-------------------CCC--CCCCeEEeecccchhhcCCCcccc--------------------
Confidence 999886532211 011 146899999999998876543210
Q ss_pred ccccCCCCCCCCCEEEEEeeccCCCChHHHH----HHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHH
Q 003987 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLV----ECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT 636 (781)
Q Consensus 561 ~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~Li----eA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~e 636 (781)
..+ .+++++|+|+||+++.||++.++ +++..+.+..|+++|+|+|+|+. +. +++
T Consensus 218 ---~~~--~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~-------------~~----~~~ 275 (397)
T TIGR03087 218 ---NPY--PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS-------------PA----VRA 275 (397)
T ss_pred ---CCC--CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh-------------HH----HHH
Confidence 011 24567899999999999999988 56666766778999999999965 12 233
Q ss_pred cCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECC
Q 003987 637 YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDP 715 (781)
Q Consensus 637 lgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p 715 (781)
++..++|+|+|+++ ++..+++. +|++|+||. .||+|++++|||+||+|||+|+.|+. .+...+++|++++
T Consensus 276 l~~~~~V~~~G~v~------~~~~~~~~-adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv~- 346 (397)
T TIGR03087 276 LAALPGVTVTGSVA------DVRPYLAH-AAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLVA- 346 (397)
T ss_pred hccCCCeEEeeecC------CHHHHHHh-CCEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEeC-
Confidence 44457899999543 47788885 999999997 69999999999999999999997643 3444456799996
Q ss_pred CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 716 YHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 716 ~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
+|+++++++|.+++ +|++.+++|+++|++++.++|||+. +++.|++++
T Consensus 347 ~~~~~la~ai~~ll----~~~~~~~~~~~~ar~~v~~~fsw~~--~~~~~~~~l 394 (397)
T TIGR03087 347 ADPADFAAAILALL----ANPAEREELGQAARRRVLQHYHWPR--NLARLDALL 394 (397)
T ss_pred CCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHhCCHHH--HHHHHHHHh
Confidence 89999999998887 8999999999999999999999964 556677776
No 60
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=100.00 E-value=2.3e-31 Score=306.10 Aligned_cols=280 Identities=19% Similarity=0.246 Sum_probs=211.0
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCC--hhhHhhhhccccchhhhhHHHHHHhhCCEEEecC
Q 003987 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDS--DIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 482 (781)
Q Consensus 405 ~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s--~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 482 (781)
..++||+|++.+.....+ ++.....+|.+.++|+-........ ...|. ..|.+ ....++.+|.+|++|
T Consensus 209 ~~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~---~~y~~------~~~~~~~~D~iI~~S 278 (500)
T TIGR02918 209 LTKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSESATNETYILWN---NYYEY------QFSNADYIDFFITAT 278 (500)
T ss_pred CCCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCccCcchhHHHH---HHHHH------HHhchhhCCEEEECC
Confidence 458999999776653333 4455668999999998443222111 11122 11211 123467799999999
Q ss_pred HHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccc
Q 003987 483 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (781)
Q Consensus 483 ~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~ 562 (781)
....+.+.+.+++| +. ..+++.+||||++...+.|..
T Consensus 279 ~~~~~~l~~~~~~~----------------~~--~~~ki~viP~g~~~~~~~~~~------------------------- 315 (500)
T TIGR02918 279 DIQNQILKNQFKKY----------------YN--IEPRIYTIPVGSLDELQYPEQ------------------------- 315 (500)
T ss_pred HHHHHHHHHHhhhh----------------cC--CCCcEEEEcCCCcccccCccc-------------------------
Confidence 87655333332222 11 156899999998754432210
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003987 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~ 642 (781)
...+..|+++||+.+.||++.|++|++++.+..|+++|+|+|+|+. .+.++++++++++.++
T Consensus 316 ------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~------------~~~l~~~i~~~~l~~~ 377 (500)
T TIGR02918 316 ------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGE------------KQKLQKIINENQAQDY 377 (500)
T ss_pred ------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECchh------------HHHHHHHHHHcCCCCe
Confidence 1234579999999999999999999999998889999999999976 5789999999999999
Q ss_pred EEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCCeEEEECCC----C
Q 003987 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-GPAEIIEHGASGFHIDPY----H 717 (781)
Q Consensus 643 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~g-G~~EiI~dg~~G~lv~p~----d 717 (781)
|.|+|. .+ +..+++ .+|++|+||.+||||++++||||||+|||+|+.+ |++|+|.+|.+|++++++ |
T Consensus 378 V~f~G~----~~---~~~~~~-~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d 449 (500)
T TIGR02918 378 IHLKGH----RN---LSEVYK-DYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDD 449 (500)
T ss_pred EEEcCC----CC---HHHHHH-hCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccc
Confidence 999994 22 455666 5999999999999999999999999999999986 899999999999999843 3
Q ss_pred ----HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHh
Q 003987 718 ----PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINV 771 (781)
Q Consensus 718 ----~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~ 771 (781)
++++|++|.+++ . ++.+++|+++|++.+ ++||| ..+++.|+++++.
T Consensus 450 ~~~~~~~la~~I~~ll----~-~~~~~~~~~~a~~~a-~~fs~--~~v~~~w~~ll~~ 499 (500)
T TIGR02918 450 EDQIITALAEKIVEYF----N-SNDIDAFHEYSYQIA-EGFLT--ANIIEKWKKLVRE 499 (500)
T ss_pred hhHHHHHHHHHHHHHh----C-hHHHHHHHHHHHHHH-HhcCH--HHHHHHHHHHHhh
Confidence 788888887776 4 557899999999977 78999 5577889888864
No 61
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.98 E-value=1.9e-30 Score=292.48 Aligned_cols=271 Identities=16% Similarity=0.249 Sum_probs=214.8
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCc-EEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecC
Q 003987 405 QGFPDFIIGNYSDG-NLVASLLAYKMGIT-QCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 482 (781)
Q Consensus 405 ~~kpDIIh~~~~~~-~lva~llar~~gvp-~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 482 (781)
..++|++|+++... .+.+.++.++.+.+ ++.++|+..... ......+. ......++.+|.||++|
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--------~~~~~~~~-----~~~~~~~~~~d~ii~~S 191 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--------DRYPSGYI-----PLRRYLLSSLDAVFPCS 191 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--------hhccccch-----HHHHHHHhcCCEEEECC
Confidence 46788999876554 55556677777776 899999753211 01111111 11234578999999999
Q ss_pred HHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccc
Q 003987 483 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (781)
Q Consensus 483 ~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~ 562 (781)
....+.+++.. +....++.+++||+|...+.+..
T Consensus 192 ~~~~~~l~~~~---------------------~~~~~ki~vi~~gv~~~~~~~~~------------------------- 225 (407)
T cd04946 192 EQGRNYLQKRY---------------------PAYKEKIKVSYLGVSDPGIISKP------------------------- 225 (407)
T ss_pred HHHHHHHHHHC---------------------CCccccEEEEECCcccccccCCC-------------------------
Confidence 98766332221 22256889999999986553320
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCC--CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003987 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE--LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~--~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~ 640 (781)
...+++.|+++||+.+.||++.+++|+.++.+.+| ++.++++|+|+. .+.+++++++.+..
T Consensus 226 -----~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~------------~~~l~~~~~~~~~~ 288 (407)
T cd04946 226 -----SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL------------EDTLKELAESKPEN 288 (407)
T ss_pred -----CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH------------HHHHHHHHHhcCCC
Confidence 02456789999999999999999999999988765 466788999866 56788888888888
Q ss_pred CcEEEeccccCcCChHHHHHHHHc-cCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCC-CH
Q 003987 641 GQFRWIAAQTNRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY-HP 718 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~-aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~-d~ 718 (781)
++|.|+| .++.+++..+++. .+|+||+||.+||||++++|||+||+|||+|+.||..|+|.++++|+++++. |+
T Consensus 289 ~~V~f~G----~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~ 364 (407)
T cd04946 289 ISVNFTG----ELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTP 364 (407)
T ss_pred ceEEEec----CCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCH
Confidence 8999999 6677899999974 3789999999999999999999999999999999999999999999999874 89
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 719 ~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
++++++|.+++ +||+.+++|+++|++++.++|||+..
T Consensus 365 ~~la~~I~~ll----~~~~~~~~m~~~ar~~~~~~f~~~~~ 401 (407)
T cd04946 365 NELVSSLSKFI----DNEEEYQTMREKAREKWEENFNASKN 401 (407)
T ss_pred HHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHHcCHHHh
Confidence 99999998887 79999999999999999999999764
No 62
>PLN02275 transferase, transferring glycosyl groups
Probab=99.97 E-value=1e-29 Score=282.92 Aligned_cols=318 Identities=13% Similarity=0.059 Sum_probs=213.5
Q ss_pred HHHHHHHHCCC-ceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccccccCchh---hHHHH-
Q 003987 318 EMLLRIKRQGL-DISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWP---YLETF- 392 (781)
Q Consensus 318 eLa~~L~~~Gh-eV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~---yl~~f- 392 (781)
+++.+|+++|+ +|+ |+|...+. .........+++|+++|...... . ++ .++. |+...
T Consensus 23 ~~~~~l~~~~~~~v~----vi~~~~~~--------~~~~~~~~~~v~v~r~~~~~~~~---~-~~--~~~~~~~~~~~~~ 84 (371)
T PLN02275 23 YHALSLARQASFQVD----VVAYGGSE--------PIPALLNHPSIHIHLMVQPRLLQ---R-LP--RVLYALALLLKVA 84 (371)
T ss_pred HHHHHHHhcCCceEE----EEEecCCC--------CCHHHhcCCcEEEEECCCccccc---c-cc--cchHHHHHHHHHH
Confidence 46667788886 799 88753211 11111223468999997521110 0 11 1222 33221
Q ss_pred --HHHHHHHHHHHcCCCceEEEEcCCCc---hHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhH
Q 003987 393 --TEDVGSEITAELQGFPDFIIGNYSDG---NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTA 467 (781)
Q Consensus 393 --~~~~~~~i~~~~~~kpDIIh~~~~~~---~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~ 467 (781)
...+...+.. ...+||+||+|.+.. .+.+.++++..++|++++.|+++..... ..... ....+++.. ..
T Consensus 85 ~~~~~~~~~~~~-~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~-~~~~~--~~~~~~~~~--~~ 158 (371)
T PLN02275 85 IQFLMLLWFLCV-KIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLA-LSLGR--SHPLVRLYR--WY 158 (371)
T ss_pred HHHHHHHHHHHh-hCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHh-cccCC--CCHHHHHHH--HH
Confidence 1122222111 145999999987553 4567778888899999999986421100 00000 000011111 23
Q ss_pred HHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhh
Q 003987 468 DLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH 547 (781)
Q Consensus 468 e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~ 547 (781)
+...++.||.||++|....+...+. .|+ ++.+|+||. .+.|.|......
T Consensus 159 e~~~~~~ad~ii~~S~~~~~~l~~~-------------------~g~-----~i~vi~n~~-~~~f~~~~~~~~------ 207 (371)
T PLN02275 159 ERHYGKMADGHLCVTKAMQHELDQN-------------------WGI-----RATVLYDQP-PEFFRPASLEIR------ 207 (371)
T ss_pred HHHHHhhCCEEEECCHHHHHHHHHh-------------------cCC-----CeEEECCCC-HHHcCcCCchhc------
Confidence 5678899999999998876522111 122 278999984 455655322100
Q ss_pred cchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh-----------------ccCCCeEEEEEe
Q 003987 548 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS-----------------QLRELVNLVVVA 610 (781)
Q Consensus 548 ~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~-----------------~~~~~v~LvIVG 610 (781)
+. .+...+++++||+.+.||++.+++|+..+. +..|+++|+|+|
T Consensus 208 ----------------~~---~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG 268 (371)
T PLN02275 208 ----------------LR---PNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITG 268 (371)
T ss_pred ----------------cc---CCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEe
Confidence 10 123457889999999999999999998873 235789999999
Q ss_pred CcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcC---CCCCCcHHHHHHHH
Q 003987 611 GYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA---FYEAFGLTVVEAMT 687 (781)
Q Consensus 611 ~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS---~~E~fGltvlEAMa 687 (781)
+|+. .++++++++++++++ +.|.+. .++.+++..+|+. +|++|.|+ ..|+||++++||||
T Consensus 269 ~G~~------------~~~l~~~~~~~~l~~-v~~~~~---~~~~~~~~~~l~~-aDv~v~~~~s~~~e~~p~~llEAmA 331 (371)
T PLN02275 269 KGPQ------------KAMYEEKISRLNLRH-VAFRTM---WLEAEDYPLLLGS-ADLGVSLHTSSSGLDLPMKVVDMFG 331 (371)
T ss_pred CCCC------------HHHHHHHHHHcCCCc-eEEEcC---CCCHHHHHHHHHh-CCEEEEeccccccccccHHHHHHHH
Confidence 9987 678999999999976 887662 4668899999995 99999863 24899999999999
Q ss_pred cCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHH
Q 003987 688 CGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADF 728 (781)
Q Consensus 688 ~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~ 728 (781)
||+|||+|+.||..|+|+++++|++++ |++++|++|.++
T Consensus 332 ~G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l 370 (371)
T PLN02275 332 CGLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLEL 370 (371)
T ss_pred CCCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHh
Confidence 999999999999999999999999997 699999999765
No 63
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.97 E-value=8.8e-29 Score=273.67 Aligned_cols=269 Identities=20% Similarity=0.263 Sum_probs=208.8
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCC-hhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHH
Q 003987 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDS-DIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (781)
Q Consensus 406 ~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s-~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (781)
.++|+||++....... .++......+.+.++|+......... ...|+ ..|.. ....++.+|.||++|..
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~---~~~~~------~~~~~~~~d~ii~~s~~ 167 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLIN---NFYEY------VFENLDKVDGVIVATEQ 167 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCcccccccccc---hhhHH------HHhChhhCCEEEEccHH
Confidence 5899999988775333 23444455677889997543221110 01111 11111 11246789999999987
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccccc
Q 003987 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (781)
Q Consensus 485 ~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~ 564 (781)
....+.+.. +. ..++.+||||++...+.+...
T Consensus 168 ~~~~l~~~~-------------------~~---~~~v~~ip~g~~~~~~~~~~~-------------------------- 199 (372)
T cd04949 168 QKQDLQKQF-------------------GN---YNPIYTIPVGSIDPLKLPAQF-------------------------- 199 (372)
T ss_pred HHHHHHHHh-------------------CC---CCceEEEcccccChhhcccch--------------------------
Confidence 765332221 11 235889999999876654320
Q ss_pred CCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003987 565 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (781)
Q Consensus 565 g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~ 644 (781)
....+..++++||+.+.||++.+++++.++.+..|+++|+|+|.|+. ...+..+++++++.++|.
T Consensus 200 ---~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~ 264 (372)
T cd04949 200 ---KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDE------------EEKLKELIEELGLEDYVF 264 (372)
T ss_pred ---hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCch------------HHHHHHHHHHcCCcceEE
Confidence 02345689999999999999999999999998889999999999976 456778888999999999
Q ss_pred EeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCCeEEEECCCCHHHHHH
Q 003987 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-GPAEIIEHGASGFHIDPYHPDQAAE 723 (781)
Q Consensus 645 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~g-G~~EiI~dg~~G~lv~p~d~~~lA~ 723 (781)
|.|+. +++.++++. +|++|.||..|+||++++|||+||+|||+|+.+ |+.++|.++.+|++++++|++++++
T Consensus 265 ~~g~~------~~~~~~~~~-ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~ 337 (372)
T cd04949 265 LKGYT------RDLDEVYQK-AQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAE 337 (372)
T ss_pred EcCCC------CCHHHHHhh-hhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHH
Confidence 99943 357788885 999999999999999999999999999999987 8999999999999999999999999
Q ss_pred HHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 724 LMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 724 ~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
+|..++ .|++.++++++++++.+ ++|||+..
T Consensus 338 ~i~~ll----~~~~~~~~~~~~a~~~~-~~~s~~~~ 368 (372)
T cd04949 338 AIIELL----NDPKLLQKFSEAAYENA-ERYSEENV 368 (372)
T ss_pred HHHHHH----cCHHHHHHHHHHHHHHH-HHhhHHHH
Confidence 998888 89999999999999995 89999653
No 64
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.97 E-value=3.2e-29 Score=275.21 Aligned_cols=260 Identities=20% Similarity=0.244 Sum_probs=186.3
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhh------HhhhhccccchhhhhHHHHHHhhCCEE
Q 003987 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIY------WKKFDEKYHFSCQFTADLIAMNNADFI 478 (781)
Q Consensus 405 ~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~------~k~~~~~y~f~~~~~~e~~a~~~AD~I 478 (781)
..++|+||++.... +..+.+..++|.+...|+.....+.....+ ++.....+-+......+..+++++|.+
T Consensus 81 ~~~~D~v~~~~~~~---~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 157 (351)
T cd03804 81 LSGYDLVISSSHAV---AKGVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYF 157 (351)
T ss_pred ccCCCEEEEcCcHH---hccccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 45899999876432 222225567888888886321111100000 000000000001112345678999999
Q ss_pred EecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcc
Q 003987 479 ITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPE 558 (781)
Q Consensus 479 It~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~ 558 (781)
+++|...++...+. +..+..+|+||+|.+.|.+..
T Consensus 158 i~~S~~~~~~~~~~------------------------~~~~~~vi~~~~d~~~~~~~~--------------------- 192 (351)
T cd03804 158 IANSRFVARRIKKY------------------------YGRDATVIYPPVDTDRFTPAE--------------------- 192 (351)
T ss_pred EECCHHHHHHHHHH------------------------hCCCcEEECCCCCHhhcCcCC---------------------
Confidence 99999876532111 134567999999987664421
Q ss_pred ccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC
Q 003987 559 QNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK 638 (781)
Q Consensus 559 ~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elg 638 (781)
..++.++++||+.+.||++.+++|+++++ ++|+|+|+|+. .+.+++ +
T Consensus 193 -----------~~~~~il~~G~~~~~K~~~~li~a~~~~~-----~~l~ivG~g~~------------~~~l~~-----~ 239 (351)
T cd03804 193 -----------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG-----KRLVVIGDGPE------------LDRLRA-----K 239 (351)
T ss_pred -----------CCCCEEEEEEcCccccChHHHHHHHHHCC-----CcEEEEECChh------------HHHHHh-----h
Confidence 23457899999999999999999998763 78999999965 333333 4
Q ss_pred CCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCH
Q 003987 639 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP 718 (781)
Q Consensus 639 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~ 718 (781)
..++|+|+| .++.+++..+++. +|++|+||. |+||++++|||+||+|||+|+.||..|++.++.+|++++++|+
T Consensus 240 ~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~ 313 (351)
T cd03804 240 AGPNVTFLG----RVSDEELRDLYAR-ARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTV 313 (351)
T ss_pred cCCCEEEec----CCCHHHHHHHHHh-CCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCH
Confidence 568999999 6778899999995 999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 719 ~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
++++++|..++ +|++ .+.+++++++ ++|+|+..
T Consensus 314 ~~la~~i~~l~----~~~~---~~~~~~~~~~-~~~~~~~~ 346 (351)
T cd03804 314 ESLAAAVERFE----KNED---FDPQAIRAHA-ERFSESRF 346 (351)
T ss_pred HHHHHHHHHHH----hCcc---cCHHHHHHHH-HhcCHHHH
Confidence 99999998887 6763 2334444555 56888664
No 65
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.96 E-value=8.4e-28 Score=274.92 Aligned_cols=270 Identities=11% Similarity=0.099 Sum_probs=190.7
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCc-hHH--HHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHH
Q 003987 395 DVGSEITAELQGFPDFIIGNYSDG-NLV--ASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIA 471 (781)
Q Consensus 395 ~~~~~i~~~~~~kpDIIh~~~~~~-~lv--a~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a 471 (781)
++.+.+.+ .+|||||.+.+.. ++. |..+|++++ |+|.++|+.... |.... .....-.+..+.. . ..
T Consensus 425 dI~~~L~~---f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~e-Yl~~y----~~g~L~~~llk~l-~-~~ 493 (794)
T PLN02501 425 DTSQFIPS---KDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLE-YIKRE----KNGALQAFFVKHI-N-NW 493 (794)
T ss_pred HHHHHhhc---cCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHH-HHhHh----cchhHHHHHHHHH-H-HH
Confidence 34444443 4899999999886 677 888999999 899999986542 11100 0000001011000 0 12
Q ss_pred Hhh--CCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcc
Q 003987 472 MNN--ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGS 549 (781)
Q Consensus 472 ~~~--AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~ 549 (781)
+.. ||.|++.|..... +. ...+..| ||||.+.|.|......+
T Consensus 494 v~r~hcD~VIaPS~atq~--------------------------L~--~~vI~nV-nGVDte~F~P~~r~~~~------- 537 (794)
T PLN02501 494 VTRAYCHKVLRLSAATQD--------------------------LP--KSVICNV-HGVNPKFLKIGEKVAEE------- 537 (794)
T ss_pred HHHhhCCEEEcCCHHHHH--------------------------hc--ccceeec-ccccccccCCcchhHHH-------
Confidence 222 8999999965432 00 1122222 69999999886553322
Q ss_pred hhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHH
Q 003987 550 IEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEK 629 (781)
Q Consensus 550 i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~ 629 (781)
..+|. +...+.++|+|||.+.||++.|++|++++.+..++++|+|+|+|+. .+.
T Consensus 538 ------------r~lgi--~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP~------------ree 591 (794)
T PLN02501 538 ------------RELGQ--QAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGED------------AHE 591 (794)
T ss_pred ------------HhcCC--ccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCcc------------HHH
Confidence 12343 2223458899999999999999999999887778999999999987 678
Q ss_pred HHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCe
Q 003987 630 MHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGAS 709 (781)
Q Consensus 630 l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~ 709 (781)
+++++.++++ +|.|+|.+.+ ...+|+ ++|+||+||.+|+||++++||||||+|||+|+.+|. +++.++.+
T Consensus 592 Le~la~eLgL--~V~FLG~~dd------~~~lya-saDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~n 661 (794)
T PLN02501 592 VQRAAKRLDL--NLNFLKGRDH------ADDSLH-GYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPN 661 (794)
T ss_pred HHHHHHHcCC--EEEecCCCCC------HHHHHH-hCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCC
Confidence 8899999887 4999995432 345777 599999999999999999999999999999999985 44777888
Q ss_pred EEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 710 GFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 710 G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
|+++ +|+++++++|.+++ .|+..+..+.+ ...|||++.
T Consensus 662 Gll~--~D~EafAeAI~~LL----sd~~~rl~~~a------~~~~SWeAa 699 (794)
T PLN02501 662 CLTY--KTSEDFVAKVKEAL----ANEPQPLTPEQ------RYNLSWEAA 699 (794)
T ss_pred eEec--CCHHHHHHHHHHHH----hCchhhhHHHH------HhhCCHHHH
Confidence 8875 69999999999888 56654433322 248899653
No 66
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.96 E-value=6.3e-28 Score=272.73 Aligned_cols=436 Identities=16% Similarity=0.161 Sum_probs=285.9
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeee--
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV-- 356 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v-- 356 (781)
|||+.+|.-..| .-.+||....+- .|.+.|++.|++|. |+.+.++. ....+....+.+
T Consensus 1 M~Il~v~~E~~p-------~vK~GGLaDv~~--------alpk~L~~~g~~v~----v~lP~y~~-~~~~~~~~~~~~~~ 60 (487)
T COG0297 1 MKILFVASEIFP-------FVKTGGLADVVG--------ALPKALAKRGVDVR----VLLPSYPK-VQKEWRDLLKVVGK 60 (487)
T ss_pred CcceeeeeeecC-------ccccCcHHHHHH--------HhHHHHHhcCCeEE----EEcCCchh-hhhhhccccceeeE
Confidence 789998877664 347899888888 56677899999999 88888763 222222221111
Q ss_pred ----cC-CCCeEEEEeccCC--Cccc-c--ccccccc--Cch------hhHHHHHHHHHHHHHHHcC--CCceEEEEcCC
Q 003987 357 ----SG-TEHTHILRVPFRS--EKGI-L--RQWISRF--DVW------PYLETFTEDVGSEITAELQ--GFPDFIIGNYS 416 (781)
Q Consensus 357 ----~~-~~~~~I~rvp~~~--~~~~-~--~~~isr~--~i~------~yl~~f~~~~~~~i~~~~~--~kpDIIh~~~~ 416 (781)
.+ .....++...... -+-+ + ....+|. ..+ -.+..|...+...+-. .. ..|||||+|+|
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~-~~~~~~pDIvH~hDW 139 (487)
T COG0297 61 FGVLKGGRAQLFIVKEYGKDGGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELAPL-GLISWLPDIVHAHDW 139 (487)
T ss_pred eeeeecccceEEEEEeecccCCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHHhhh-cCCCCCCCEEEeecH
Confidence 10 0111111111100 0000 0 1112221 111 1223344333333322 12 37999999999
Q ss_pred CchHHHHHHHHH----cCCcEEEEecCCcccCCCC-ChhhHhhhh-cccc-----chhhhhHHHHHHhhCCEEEecCHHH
Q 003987 417 DGNLVASLLAYK----MGITQCTIAHALEKTKYPD-SDIYWKKFD-EKYH-----FSCQFTADLIAMNNADFIITSTYQE 485 (781)
Q Consensus 417 ~~~lva~llar~----~gvp~v~t~H~l~~~k~~~-s~~~~k~~~-~~y~-----f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (781)
..+++..+++.. ..+|.|+|+|++..+.... ....+-.+. ..|+ +..+....+..+..||.|.|+|+..
T Consensus 140 qt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptY 219 (487)
T COG0297 140 QTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTY 219 (487)
T ss_pred HHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHH
Confidence 999999999984 4799999999986654332 111111111 1111 1122334556788899999999988
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccC
Q 003987 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (781)
Q Consensus 486 ~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g 565 (781)
+...... .| +..+.++.+ ....++.-|-||+|.+.+.|.++......--.+..+....++....+++|
T Consensus 220 a~Ei~t~--~~----g~gl~g~l~------~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~g 287 (487)
T COG0297 220 AGEIYTP--EY----GEGLEGLLS------WRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLG 287 (487)
T ss_pred HHhhccc--cc----cccchhhhh------hccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhC
Confidence 7643311 11 112222221 11357888999999999988766422110000111123334555667889
Q ss_pred CCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003987 566 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (781)
Q Consensus 566 ~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~f 645 (781)
+..+.+.|++.++||+..+||++.+++++..+.+.. ++|++.|.|.. ...+.+..+++++.. ++..
T Consensus 288 L~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~~vilG~gd~----------~le~~~~~la~~~~~--~~~~ 353 (487)
T COG0297 288 LDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQLVLLGTGDP----------ELEEALRALASRHPG--RVLV 353 (487)
T ss_pred CCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ceEEEEecCcH----------HHHHHHHHHHHhcCc--eEEE
Confidence 976778899999999999999999999999998864 99999999933 567788888888753 4444
Q ss_pred eccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc--------CCeEEEECCCC
Q 003987 646 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH--------GASGFHIDPYH 717 (781)
Q Consensus 646 lG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d--------g~~G~lv~p~d 717 (781)
.- .. ++.+.+.+...+|++++||++|+||++-++||..|+++|++.+||.++.|.+ ..+|+++.+.+
T Consensus 354 ~i----~~-~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~ 428 (487)
T COG0297 354 VI----GY-DEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTN 428 (487)
T ss_pred Ee----ee-cHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCC
Confidence 33 22 3455555555799999999999999999999999999999999999998875 57999999999
Q ss_pred HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh--hhccchHHHH
Q 003987 718 PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD--GIVDPSPFVI 769 (781)
Q Consensus 718 ~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~--~il~~ye~ll 769 (781)
+++++.+|.+.+.-....+..|+.+..++.. ..|+|+.+ ...+.|+.++
T Consensus 429 ~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~lY~~~~ 479 (487)
T COG0297 429 PDHLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVELYKPLL 479 (487)
T ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHHHHHHh
Confidence 9999999998886666666669999998877 68999886 3344444443
No 67
>PHA01630 putative group 1 glycosyl transferase
Probab=99.96 E-value=1.2e-27 Score=262.38 Aligned_cols=256 Identities=13% Similarity=0.091 Sum_probs=185.6
Q ss_pred EcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHH-HhhCCEEEecCHHHHhhccc
Q 003987 413 GNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIA-MNNADFIITSTYQEIAGTKN 491 (781)
Q Consensus 413 ~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a-~~~AD~IIt~S~~~~~~~k~ 491 (781)
.|+....+..+...++.|+|+++++|+... +.. ..+... .+.+|.||++|....+.+.+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~-------l~~-------------~~~~~~~~~~ad~ii~~S~~~~~~l~~ 111 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTDA-------ISH-------------TALYFFRNQPVDEIVVPSQWSKNAFYT 111 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeech-------hhH-------------HHHHHHhhccCCEEEECCHHHHHHHHH
Confidence 455444555555556679999999997211 000 112234 67899999999887652211
Q ss_pred cccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCC
Q 003987 492 TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRS 571 (781)
Q Consensus 492 ~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~ 571 (781)
.|++. ..++.+||||+|.+.|.+.... ..+
T Consensus 112 --------------------~g~~~-~~~i~vIpNGVd~~~f~~~~~~-----------------------------~~~ 141 (331)
T PHA01630 112 --------------------SGLKI-PQPIYVIPHNLNPRMFEYKPKE-----------------------------KPH 141 (331)
T ss_pred --------------------cCCCC-CCCEEEECCCCCHHHcCCCccc-----------------------------cCC
Confidence 12221 3589999999998877653210 123
Q ss_pred CCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccC
Q 003987 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (781)
Q Consensus 572 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~ 651 (781)
+.++++.|++.+.||++.|++|++++.+..++++|+|+|++.. ..++ .++.+ +.|
T Consensus 142 ~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~------------~~~l------~~~~~---~~~---- 196 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNML------------DPRL------FGLNG---VKT---- 196 (331)
T ss_pred CEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCccc------------chhh------ccccc---eec----
Confidence 4567788899999999999999999988778999999997654 1111 12222 233
Q ss_pred cCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECC----------------
Q 003987 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDP---------------- 715 (781)
Q Consensus 652 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p---------------- 715 (781)
.++.+++..+|+. +|+||+||.+|+||++++||||||+|||+|+.||..|+|.++.+|+++++
T Consensus 197 ~v~~~~l~~~y~~-aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~ 275 (331)
T PHA01630 197 PLPDDDIYSLFAG-CDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGY 275 (331)
T ss_pred cCCHHHHHHHHHh-CCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccccc
Confidence 5677899999995 99999999999999999999999999999999999999999988887753
Q ss_pred ---CCHHHHHHHHHHHHHhccCC--HHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 716 ---YHPDQAAELMADFFGKCKEN--PSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 716 ---~d~~~lA~~I~~~l~~l~~d--p~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
.|.+++++++.+++ .| ++.++++..++.+.+.++|||+. +++.|++++.
T Consensus 276 ~v~~~~~~~~~~ii~~l----~~~~~~~~~~~~~~~~~~~~~~fs~~~--ia~k~~~l~~ 329 (331)
T PHA01630 276 FLDPDIEDAYQKLLEAL----ANWTPEKKKENLEGRAILYRENYSYNA--IAKMWEKILE 329 (331)
T ss_pred ccCCCHHHHHHHHHHHH----hCCCHHHHHHHHHHHHHHHHHhCCHHH--HHHHHHHHHh
Confidence 27788888888777 44 34455555555666679999955 5677887774
No 68
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.95 E-value=2.1e-26 Score=261.39 Aligned_cols=319 Identities=16% Similarity=0.151 Sum_probs=199.0
Q ss_pred CCCceEEEEcCCCchHHHHHHH-HHcCCcEEEEecCCcccCCCCC---hhhHh-------hhhccccchhhhhHHHHHHh
Q 003987 405 QGFPDFIIGNYSDGNLVASLLA-YKMGITQCTIAHALEKTKYPDS---DIYWK-------KFDEKYHFSCQFTADLIAMN 473 (781)
Q Consensus 405 ~~kpDIIh~~~~~~~lva~lla-r~~gvp~v~t~H~l~~~k~~~s---~~~~k-------~~~~~y~f~~~~~~e~~a~~ 473 (781)
..++||+|+|.|..+..+..++ +..++|.|+|.|+....++... +++-. .-.....+..+...|..+..
T Consensus 146 ~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~ 225 (590)
T cd03793 146 DEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAH 225 (590)
T ss_pred CCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHh
Confidence 4689999999999999988888 5578999999999877664211 12211 00111222334456888999
Q ss_pred hCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhh
Q 003987 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 553 (781)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~ 553 (781)
.||.+||+|.......+.. | |. +..+ |||||+|.+.|.+..+..+....-+..|.+.
T Consensus 226 ~Ad~fttVS~it~~E~~~L---------------l----~~--~pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f 282 (590)
T cd03793 226 CAHVFTTVSEITAYEAEHL---------------L----KR--KPDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEF 282 (590)
T ss_pred hCCEEEECChHHHHHHHHH---------------h----CC--CCCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHH
Confidence 9999999999876643322 1 22 1334 9999999999877654332211111222221
Q ss_pred ccCccccccccCCCCCCCCCEEEE-EeeccC-CCChHHHHHHHHHhhc----cCCC---eEEEEEeCcCCCCCCcchH--
Q 003987 554 LFDPEQNDEHVGTLSDRSKPIVFS-MARLDH-VKNMTGLVECYGKNSQ----LREL---VNLVVVAGYIDVNKSKDRE-- 622 (781)
Q Consensus 554 l~~~~~~~~~~g~l~~~~k~iIl~-vGRL~~-~Kgl~~LieA~~~l~~----~~~~---v~LvIVG~g~~~~~~~d~e-- 622 (781)
. ....+.++++ ++++++++| +||+.. .||++.+|+|++++.. ...+ +-|+|+-.+.. +.+.+
T Consensus 283 ~--~~~~~~~~~~--~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~---~~~~~~l 355 (590)
T cd03793 283 V--RGHFYGHYDF--DLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTN---NFNVESL 355 (590)
T ss_pred H--HHHHhhhcCC--CCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccC---CcCHHhh
Confidence 1 1112345665 667777776 799998 9999999999999865 1232 23444433311 00000
Q ss_pred --------HHHHHHH------------------------------------------------------------HHHHH
Q 003987 623 --------EIAEIEK------------------------------------------------------------MHELM 634 (781)
Q Consensus 623 --------e~~~~~~------------------------------------------------------------l~~li 634 (781)
-.+..+. +-..+
T Consensus 356 ~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~ 435 (590)
T cd03793 356 KGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHI 435 (590)
T ss_pred cchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHH
Confidence 0000011 11122
Q ss_pred HHcCCC----Cc--EEEec---cccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccc----c
Q 003987 635 KTYKLD----GQ--FRWIA---AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP----A 701 (781)
Q Consensus 635 ~elgL~----~~--V~flG---~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~----~ 701 (781)
.+.+|. ++ |.|.+ ..+|++-..+.+.+++. +|+||+||++|+||++++||||||+|||+|+.+|+ .
T Consensus 436 r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g-~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~ 514 (590)
T cd03793 436 RRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRG-CHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME 514 (590)
T ss_pred HHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhh-ceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH
Confidence 222232 22 44444 12233445567778884 99999999999999999999999999999999998 5
Q ss_pred cccccC-CeEEEEC-------CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH-HHHHHhcCcchh
Q 003987 702 EIIEHG-ASGFHID-------PYHPDQAAELMADFFGKCKENPSHWKKISDGGL-KRIYERLVVSSD 759 (781)
Q Consensus 702 EiI~dg-~~G~lv~-------p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~-~~~~~~ysw~~~ 759 (781)
|++.++ ..|..+. +.+.++++++|.+++ .. +.++.+.++++ ++..+.|+|+..
T Consensus 515 E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~----~~-~~r~~~~~r~~~~r~s~~f~W~~~ 576 (590)
T cd03793 515 EHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFC----QL-SRRQRIIQRNRTERLSDLLDWRNL 576 (590)
T ss_pred HHhccCCCceEEEecCCccchHHHHHHHHHHHHHHh----CC-cHHHHHHHHHHHHHHHHhCCHHHH
Confidence 666555 3577776 344556666666554 33 46676666654 344589999776
No 69
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.95 E-value=2.3e-25 Score=245.91 Aligned_cols=342 Identities=13% Similarity=0.116 Sum_probs=230.9
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecC
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~ 358 (781)
|||+|++. | .||.+.... +|++.|.++||+|+ ++|..... . ....+.
T Consensus 2 ~~i~i~~~-g------------~gG~~~~~~--------~la~~L~~~g~ev~----vv~~~~~~-~----~~~~~~--- 48 (357)
T PRK00726 2 KKILLAGG-G------------TGGHVFPAL--------ALAEELKKRGWEVL----YLGTARGM-E----ARLVPK--- 48 (357)
T ss_pred cEEEEEcC-c------------chHhhhHHH--------HHHHHHHhCCCEEE----EEECCCch-h----hhcccc---
Confidence 89988863 1 367777777 77888899999999 88764311 0 001111
Q ss_pred CCCeEEEEeccCCCcccccccccccC-chhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEe
Q 003987 359 TEHTHILRVPFRSEKGILRQWISRFD-VWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIA 437 (781)
Q Consensus 359 ~~~~~I~rvp~~~~~~~~~~~isr~~-i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~ 437 (781)
.++++++++.....+. ...++.. .+.++ .....+.+.++ ..+|||||+|.+.+++.+.++++..++|++++.
T Consensus 49 -~g~~~~~~~~~~~~~~--~~~~~l~~~~~~~-~~~~~~~~~ik---~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~ 121 (357)
T PRK00726 49 -AGIEFHFIPSGGLRRK--GSLANLKAPFKLL-KGVLQARKILK---RFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHE 121 (357)
T ss_pred -CCCcEEEEeccCcCCC--ChHHHHHHHHHHH-HHHHHHHHHHH---hcCCCEEEECCCcchhHHHHHHHHcCCCEEEEc
Confidence 2567888876432110 0000000 11111 11122233333 348999999988777888888888999999876
Q ss_pred cCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003987 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (781)
Q Consensus 438 H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f 517 (781)
|+.... ....+.++.+|.+++++++... . ..
T Consensus 122 ~~~~~~----------------------~~~r~~~~~~d~ii~~~~~~~~---------------------~------~~ 152 (357)
T PRK00726 122 QNAVPG----------------------LANKLLARFAKKVATAFPGAFP---------------------E------FF 152 (357)
T ss_pred CCCCcc----------------------HHHHHHHHHhchheECchhhhh---------------------c------cC
Confidence 642110 1133567789999998864311 0 12
Q ss_pred CCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHH-HHHHH
Q 003987 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLV-ECYGK 596 (781)
Q Consensus 518 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~Li-eA~~~ 596 (781)
..++.+++||+|.+.+.+.... +++++ +++.++|+++|+....|++..++ +|+.+
T Consensus 153 ~~~i~vi~n~v~~~~~~~~~~~----------------------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~ 208 (357)
T PRK00726 153 KPKAVVTGNPVREEILALAAPP----------------------ARLAG--REGKPTLLVVGGSQGARVLNEAVPEALAL 208 (357)
T ss_pred CCCEEEECCCCChHhhcccchh----------------------hhccC--CCCCeEEEEECCcHhHHHHHHHHHHHHHH
Confidence 6799999999998765442211 12344 45677888999988888876665 89888
Q ss_pred hhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCC
Q 003987 597 NSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 676 (781)
Q Consensus 597 l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E 676 (781)
+... + ..++++|+|.. +.+.+..+ +++. |.+.|++ +++..+++. +|++|++|-
T Consensus 209 ~~~~-~-~~~~~~G~g~~-------------~~~~~~~~-~~~~--v~~~g~~------~~~~~~~~~-~d~~i~~~g-- 261 (357)
T PRK00726 209 LPEA-L-QVIHQTGKGDL-------------EEVRAAYA-AGIN--AEVVPFI------DDMAAAYAA-ADLVICRAG-- 261 (357)
T ss_pred hhhC-c-EEEEEcCCCcH-------------HHHHHHhh-cCCc--EEEeehH------hhHHHHHHh-CCEEEECCC--
Confidence 8653 3 56778898853 33444445 6664 9999954 467888885 999999862
Q ss_pred CCcHHHHHHHHcCCcEEEcCccc--------cccccccCCeEEEECCCC--HHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 003987 677 AFGLTVVEAMTCGLPTFATCHGG--------PAEIIEHGASGFHIDPYH--PDQAAELMADFFGKCKENPSHWKKISDGG 746 (781)
Q Consensus 677 ~fGltvlEAMa~GlPVVaT~~gG--------~~EiI~dg~~G~lv~p~d--~~~lA~~I~~~l~~l~~dp~~~~~~s~~a 746 (781)
+.+++|||+||+|||++..++ ..+.+.++++|+++++.| +++++++|.+++ +|++.+++|++++
T Consensus 262 --~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~ 335 (357)
T PRK00726 262 --ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELL----SDPERLEAMAEAA 335 (357)
T ss_pred --HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHH----cCHHHHHHHHHHH
Confidence 689999999999999987643 246677788999999888 999999998887 8999999999999
Q ss_pred HHHHHHhcCcchhhhccchHHHH
Q 003987 747 LKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 747 ~~~~~~~ysw~~~~il~~ye~ll 769 (781)
++++ +.++- ..+++.|.+++
T Consensus 336 ~~~~-~~~~~--~~~~~~~~~~~ 355 (357)
T PRK00726 336 RALG-KPDAA--ERLADLIEELA 355 (357)
T ss_pred HhcC-CcCHH--HHHHHHHHHHh
Confidence 8876 44533 45666776654
No 70
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.94 E-value=2.5e-24 Score=236.07 Aligned_cols=313 Identities=14% Similarity=0.135 Sum_probs=218.2
Q ss_pred cccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccc
Q 003987 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWI 380 (781)
Q Consensus 301 ~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~i 380 (781)
+||.+.++. +|++.|.++||+|+ |+|...... .+.. ...++++.++|+....+
T Consensus 9 ~gG~~~~~~--------~la~~l~~~G~ev~----v~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~------ 61 (350)
T cd03785 9 TGGHIFPAL--------ALAEELRERGAEVL----FLGTKRGLE--------ARLV-PKAGIPLHTIPVGGLRR------ 61 (350)
T ss_pred chhhhhHHH--------HHHHHHHhCCCEEE----EEECCCcch--------hhcc-cccCCceEEEEecCcCC------
Confidence 588888877 78888899999999 888753211 0111 11257788887753211
Q ss_pred cccCchhhHH------HHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhh
Q 003987 381 SRFDVWPYLE------TFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKK 454 (781)
Q Consensus 381 sr~~i~~yl~------~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~ 454 (781)
...+..+. .....+.+.++ +.+||+||+|....++.+.++++..++|+++..|+..+ .
T Consensus 62 --~~~~~~~~~~~~~~~~~~~~~~~i~---~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~----------~- 125 (350)
T cd03785 62 --KGSLKKLKAPFKLLKGVLQARKILK---KFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVP----------G- 125 (350)
T ss_pred --CChHHHHHHHHHHHHHHHHHHHHHH---hcCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCc----------c-
Confidence 11111111 11122333333 34899999998777777888889999999876553211 0
Q ss_pred hhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCC
Q 003987 455 FDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYF 534 (781)
Q Consensus 455 ~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~ 534 (781)
....+.++.+|.|++.|+...+ + ....++.+++||+|.+.+.
T Consensus 126 -----------~~~~~~~~~~~~vi~~s~~~~~--------------------~-------~~~~~~~~i~n~v~~~~~~ 167 (350)
T cd03785 126 -----------LANRLLARFADRVALSFPETAK--------------------Y-------FPKDKAVVTGNPVREEILA 167 (350)
T ss_pred -----------HHHHHHHHhhCEEEEcchhhhh--------------------c-------CCCCcEEEECCCCchHHhh
Confidence 0123456679999999987643 0 1156899999999987665
Q ss_pred CCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHH-HHHHHHHhhccCCCeEE-EEEeCc
Q 003987 535 PYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTG-LVECYGKNSQLRELVNL-VVVAGY 612 (781)
Q Consensus 535 p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~-LieA~~~l~~~~~~v~L-vIVG~g 612 (781)
+... + +.+++ ++++++|+++|+....|+... +++++..+.+ +++.+ +++|.+
T Consensus 168 ~~~~---~-------------------~~~~~--~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~--~~~~~~~i~G~g 221 (350)
T cd03785 168 LDRE---R-------------------ARLGL--RPGKPTLLVFGGSQGARAINEAVPEALAELLR--KRLQVIHQTGKG 221 (350)
T ss_pred hhhh---H-------------------HhcCC--CCCCeEEEEECCcHhHHHHHHHHHHHHHHhhc--cCeEEEEEcCCc
Confidence 4321 1 23555 566778888887777777765 4588888763 45664 467776
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcE
Q 003987 613 IDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPT 692 (781)
Q Consensus 613 ~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPV 692 (781)
. .+++++.++++ .++|+|.|++ .++..+|+. +|++|.++- +++++|||+||+||
T Consensus 222 -~------------~~~l~~~~~~~--~~~v~~~g~~------~~~~~~l~~-ad~~v~~sg----~~t~~Eam~~G~Pv 275 (350)
T cd03785 222 -D------------LEEVKKAYEEL--GVNYEVFPFI------DDMAAAYAA-ADLVISRAG----ASTVAELAALGLPA 275 (350)
T ss_pred -c------------HHHHHHHHhcc--CCCeEEeehh------hhHHHHHHh-cCEEEECCC----HhHHHHHHHhCCCE
Confidence 4 45667777766 4789999953 467888885 999998762 68999999999999
Q ss_pred EEcCccc--------cccccccCCeEEEECCC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 003987 693 FATCHGG--------PAEIIEHGASGFHIDPY--HPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (781)
Q Consensus 693 VaT~~gG--------~~EiI~dg~~G~lv~p~--d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~ 750 (781)
|+++.++ ..+.+.++++|+++++. |+++++++|.+++ .|++.+++|++++++++
T Consensus 276 v~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~ 339 (350)
T cd03785 276 ILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELL----SDPERLKAMAEAARSLA 339 (350)
T ss_pred EEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHhcC
Confidence 9987654 35677778899999987 8999999998887 79999999999998876
No 71
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.94 E-value=3.2e-25 Score=253.60 Aligned_cols=315 Identities=14% Similarity=0.073 Sum_probs=211.1
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhh
Q 003987 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (781)
Q Consensus 396 ~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~ 474 (781)
.+..+.... ...|+|+.|.+...+++..+.++. ..|+++..|..++. +.. |..+- ....-...|-.
T Consensus 121 fa~~i~~~~-~~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~HipfP~----~e~-~~~lp-------~~~~ll~~~l~ 187 (460)
T cd03788 121 FADAIAEVL-RPGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPS----SEI-FRCLP-------WREELLRGLLG 187 (460)
T ss_pred HHHHHHHhc-CCCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCCCC----hHH-HhhCC-------ChHHHHHHHhc
Confidence 333444432 257999999998877777776553 58999999976542 221 22111 11122345667
Q ss_pred CCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhc
Q 003987 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLL 554 (781)
Q Consensus 475 AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l 554 (781)
+|.|...+........+.......... . ........|. ..++.++|||+|.+.|.+.......... +.
T Consensus 188 ~D~igF~t~~~~~~Fl~~~~~~l~~~~-~-~~~~i~~~g~---~~~i~vip~GID~~~f~~~~~~~~~~~~----~~--- 255 (460)
T cd03788 188 ADLIGFQTERYARNFLSCCSRLLGLEV-T-DDGGVEYGGR---RVRVGAFPIGIDPDAFRKLAASPEVQER----AA--- 255 (460)
T ss_pred CCEEEECCHHHHHHHHHHHHHHcCCcc-c-CCceEEECCE---EEEEEEEeCeEcHHHHHHHhcCchhHHH----HH---
Confidence 999999887654432222111000000 0 0001111121 3478999999999888654221110000 00
Q ss_pred cCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHHHHHHHHH
Q 003987 555 FDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAEIEKM 630 (781)
Q Consensus 555 ~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~~~~~~l 630 (781)
+..+. .+++++|+++||+++.||+..+++|++++.+.+|+ ++|+++|++.. ...++..+..+.+
T Consensus 256 -------~~~~~--~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~---g~~~~~~~l~~~l 323 (460)
T cd03788 256 -------ELRER--LGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSR---TDVPEYQELRREV 323 (460)
T ss_pred -------HHHHh--cCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCC---cCcHHHHHHHHHH
Confidence 01222 35678999999999999999999999998877775 67999986532 1123334555666
Q ss_pred HHHHHHcCCC------CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCc----EEEcCcccc
Q 003987 631 HELMKTYKLD------GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFATCHGGP 700 (781)
Q Consensus 631 ~~li~elgL~------~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP----VVaT~~gG~ 700 (781)
++++++.+.. ..|++++ ..++.+++..+|+ ++|+||+||..||||++++|||+||+| ||+|+.+|.
T Consensus 324 ~~~v~~in~~~g~~~~~~v~~~~---g~v~~~el~~~y~-~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~ 399 (460)
T cd03788 324 EELVGRINGKFGTLDWTPVRYLY---RSLPREELAALYR-AADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGA 399 (460)
T ss_pred HHHHHHHHhccCCCCceeEEEEe---CCCCHHHHHHHHH-hccEEEeCccccccCcccceeEEEecCCCceEEEeccccc
Confidence 7776664321 2355553 1677899999999 499999999999999999999999999 999998888
Q ss_pred ccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcch
Q 003987 701 AEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSS 758 (781)
Q Consensus 701 ~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~ 758 (781)
.+. +.+|++++|+|++++|++|.++++ .+++.++.+++++++.+ .+|||+.
T Consensus 400 ~~~---~~~g~lv~p~d~~~la~ai~~~l~---~~~~e~~~~~~~~~~~v-~~~~~~~ 450 (460)
T cd03788 400 AEE---LSGALLVNPYDIDEVADAIHRALT---MPLEERRERHRKLREYV-RTHDVQA 450 (460)
T ss_pred hhh---cCCCEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHH
Confidence 877 468999999999999999998873 45688899999999988 6799854
No 72
>PHA01633 putative glycosyl transferase group 1
Probab=99.93 E-value=1.2e-24 Score=237.26 Aligned_cols=224 Identities=12% Similarity=0.123 Sum_probs=164.3
Q ss_pred HHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcch
Q 003987 471 AMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSI 550 (781)
Q Consensus 471 a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i 550 (781)
.|.+.+.+|++|...++.+++ .|++ . .+ +|+||+|.+.|.|........+
T Consensus 89 ~m~~~~~vIavS~~t~~~L~~--------------------~G~~--~-~i-~I~~GVD~~~f~p~~~~~~~~r------ 138 (335)
T PHA01633 89 YLLQDVKFIPNSKFSAENLQE--------------------VGLQ--V-DL-PVFHGINFKIVENAEKLVPQLK------ 138 (335)
T ss_pred HHhcCCEEEeCCHHHHHHHHH--------------------hCCC--C-ce-eeeCCCChhhcCccchhhHHHH------
Confidence 566778899999877653221 2443 2 23 4789999998887542211111
Q ss_pred hhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHHHHH
Q 003987 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAE 626 (781)
Q Consensus 551 ~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~~~ 626 (781)
++++.. .++.++|+++||+.+.||++.|++|++++.+..++ ++|+++|++
T Consensus 139 -----------~~~~~~-~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~-------------- 192 (335)
T PHA01633 139 -----------QKLDKD-FPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK-------------- 192 (335)
T ss_pred -----------HHhCcC-CCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH--------------
Confidence 123321 13567899999999999999999999999876654 578887732
Q ss_pred HHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003987 627 IEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (781)
Q Consensus 627 ~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d 706 (781)
..+++++.++|+|+|... .++.+++.++|+. +|+||+||.+|+||++++|||+||+|||+|+.||..|++.+
T Consensus 193 ------~~~~l~l~~~V~f~g~~G-~~~~~dl~~~y~~-aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~ 264 (335)
T PHA01633 193 ------QFTQLEVPANVHFVAEFG-HNSREYIFAFYGA-MDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSW 264 (335)
T ss_pred ------HHHHcCCCCcEEEEecCC-CCCHHHHHHHHHh-CCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCC
Confidence 124567888999996322 4567899999995 99999999999999999999999999999999999987542
Q ss_pred ------------------CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchH
Q 003987 707 ------------------GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSP 766 (781)
Q Consensus 707 ------------------g~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye 766 (781)
...||.+++.|++++|++|..+++. .+++. .+.++++++ ++|+|++ +.+.|+
T Consensus 265 ~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~--~~~~~---~~~~~~~~a-~~f~~~~--~~~~~~ 334 (335)
T PHA01633 265 QWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFEL--QDREE---RSMKLKELA-KKYDIRN--LYTRFL 334 (335)
T ss_pred ccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhc--cChhh---hhHHHHHHH-HhcCHHH--HHHHhh
Confidence 2358899999999999999987631 34433 366777777 8999954 555554
No 73
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.93 E-value=3.1e-24 Score=235.17 Aligned_cols=305 Identities=15% Similarity=0.145 Sum_probs=204.4
Q ss_pred HHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccccccCchhhH---HHHHH
Q 003987 318 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYL---ETFTE 394 (781)
Q Consensus 318 eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl---~~f~~ 394 (781)
.|+++|.++||+|+ ++|+..... ... ....++++.+++.....+ .+....++.. .....
T Consensus 19 ~La~~L~~~g~eV~----vv~~~~~~~------~~~---~~~~g~~~~~i~~~~~~~-----~~~~~~l~~~~~~~~~~~ 80 (348)
T TIGR01133 19 AVAEELIKRGVEVL----WLGTKRGLE------KRL---VPKAGIEFYFIPVGGLRR-----KGSFRLIKTPLKLLKAVF 80 (348)
T ss_pred HHHHHHHhCCCEEE----EEeCCCcch------hcc---cccCCCceEEEeccCcCC-----CChHHHHHHHHHHHHHHH
Confidence 67888999999999 887632110 000 011257777777654211 0011111111 11222
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhh
Q 003987 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (781)
Q Consensus 395 ~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~ 474 (781)
.+.+.+++ .+||+||+|....++.+.++++..++|+|+..|+... . ..+.+..+.
T Consensus 81 ~l~~~i~~---~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~-----------------~-----~~~~~~~~~ 135 (348)
T TIGR01133 81 QARRILKK---FKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVP-----------------G-----LTNKLLSRF 135 (348)
T ss_pred HHHHHHHh---cCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCc-----------------c-----HHHHHHHHH
Confidence 33333433 4899999998777777888888899999754332110 0 013356678
Q ss_pred CCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhc
Q 003987 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLL 554 (781)
Q Consensus 475 AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l 554 (781)
+|.+++.|+...+ | -+..+|+||+|...+.+....
T Consensus 136 ~d~ii~~~~~~~~--------~----------------------~~~~~i~n~v~~~~~~~~~~~--------------- 170 (348)
T TIGR01133 136 AKKVLISFPGAKD--------H----------------------FEAVLVGNPVRQEIRSLPVPR--------------- 170 (348)
T ss_pred hCeeEECchhHhh--------c----------------------CCceEEcCCcCHHHhcccchh---------------
Confidence 9999999986643 0 133689999987655432110
Q ss_pred cCccccccccCCCCCCCCCEEEEEeeccCCCChHH-HHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHH
Q 003987 555 FDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTG-LVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHEL 633 (781)
Q Consensus 555 ~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~-LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~l 633 (781)
+.+++ ++++++|+++|+....|++.. ++++++++.+. ++++++++++.+ .+.+++.
T Consensus 171 -------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~~~~~~g~~~------------~~~l~~~ 227 (348)
T TIGR01133 171 -------ERFGL--REGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQIVHQTGKND------------LEKVKNV 227 (348)
T ss_pred -------hhcCC--CCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcEEEEECCcch------------HHHHHHH
Confidence 12455 456788999998888888765 55888887653 466655544433 3567777
Q ss_pred HHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc-------ccccccc
Q 003987 634 MKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG-------PAEIIEH 706 (781)
Q Consensus 634 i~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG-------~~EiI~d 706 (781)
++++++.+.+.|.. . ++..+|+ ++|++|.+| + |++++|||+||+|+|+++.+| ..+++.+
T Consensus 228 ~~~~~l~~~v~~~~-------~-~~~~~l~-~ad~~v~~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~ 294 (348)
T TIGR01133 228 YQELGIEAIVTFID-------E-NMAAAYA-AADLVISRA---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED 294 (348)
T ss_pred HhhCCceEEecCcc-------c-CHHHHHH-hCCEEEECC---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH
Confidence 88888765555552 1 5677888 499999875 2 789999999999999997654 2357888
Q ss_pred CCeEEEECCCC--HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 003987 707 GASGFHIDPYH--PDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (781)
Q Consensus 707 g~~G~lv~p~d--~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~ 750 (781)
+++|++++++| +++++++|.+++ +||+.+++|++++++++
T Consensus 295 ~~~G~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~ 336 (348)
T TIGR01133 295 LGAGLVIRQKELLPEKLLEALLKLL----LDPANLEAMAEAARKLA 336 (348)
T ss_pred CCCEEEEecccCCHHHHHHHHHHHH----cCHHHHHHHHHHHHhcC
Confidence 99999999886 999999998877 89999999999998766
No 74
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.93 E-value=4e-24 Score=243.46 Aligned_cols=319 Identities=16% Similarity=0.141 Sum_probs=214.4
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHh
Q 003987 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (781)
Q Consensus 395 ~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~ 473 (781)
.++..+.+.. ..-|+|..|...-.+++.++.++. ..++.+..|..++. ++++.. +.....-+..|-
T Consensus 116 ~fA~~i~~~~-~~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipfP~----~e~f~~--------lp~r~~il~gll 182 (456)
T TIGR02400 116 LFAEALAPLL-QPGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPS----SEIYRT--------LPWRRELLEGLL 182 (456)
T ss_pred HHHHHHHHhC-CCCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCCCC----hHHHhh--------CCcHHHHHHHHh
Confidence 3444444443 245899999999888888887765 46788899965442 222211 111223445788
Q ss_pred hCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHH---HHHhhhhcch
Q 003987 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ---KRLTALHGSI 550 (781)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~---~r~~~~~~~i 550 (781)
.||.|...|+..+..+.....+..... ..++ .+..+- -..++.++|||+|.+.|.+..... .+...+
T Consensus 183 ~~dligF~t~~~~~~Fl~~~~~~l~~~--~~~~--~~~~~g--~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~l---- 252 (456)
T TIGR02400 183 AYDLVGFQTYDDARNFLSAVSRELGLE--TLPN--GVESGG--RTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAEL---- 252 (456)
T ss_pred cCCEEEECCHHHHHHHHHHHHHHhCCc--ccCC--ceEECC--cEEEEEEecCcCCHHHHHHHhcChhHHHHHHHH----
Confidence 999999999988765544332211000 0000 001111 134788999999999886643211 111110
Q ss_pred hhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHHHHH
Q 003987 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAE 626 (781)
Q Consensus 551 ~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~~~ 626 (781)
++.+ +++++|+++||+++.||+..+++|++++.+.+|+ +.|+++|+... ...+++...
T Consensus 253 ----------r~~~-----~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~r---g~~~~~~~l 314 (456)
T TIGR02400 253 ----------RESL-----KGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSR---GDVPEYQQL 314 (456)
T ss_pred ----------HHHc-----CCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCc---cCchHHHHH
Confidence 1112 3577999999999999999999999998777665 56888864321 111222233
Q ss_pred HHHHHHHHHHcC-CCCc-----EEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCc----EEEcC
Q 003987 627 IEKMHELMKTYK-LDGQ-----FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFATC 696 (781)
Q Consensus 627 ~~~l~~li~elg-L~~~-----V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP----VVaT~ 696 (781)
.+.+++++.+.+ ..+. |++++ ..++.+++..+|+ ++|+||+||..||||++++||||||+| +|+|+
T Consensus 315 ~~~i~~lv~~in~~~~~~~~~pv~~l~---~~~~~~el~aly~-aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~ 390 (456)
T TIGR02400 315 RRQVEELVGRINGRFGTLDWTPIRYLN---RSYDREELMALYR-AADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSE 390 (456)
T ss_pred HHHHHHHHHHHHhccCCCCCccEEEEc---CCCCHHHHHHHHH-hCcEEEECccccccCccHHHHHHhcCCCCceEEEeC
Confidence 344444433221 1111 45544 2677899999999 599999999999999999999999999 99999
Q ss_pred ccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHH
Q 003987 697 HGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPF 767 (781)
Q Consensus 697 ~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ 767 (781)
.+|..+.+. +|++++|.|++++|++|.++++ .+++.++++.+++++++ .+||+ ..+++.|..
T Consensus 391 ~~G~~~~l~---~gllVnP~d~~~lA~aI~~aL~---~~~~er~~r~~~~~~~v-~~~~~--~~W~~~~l~ 452 (456)
T TIGR02400 391 FAGAAQELN---GALLVNPYDIDGMADAIARALT---MPLEEREERHRAMMDKL-RKNDV--QRWREDFLS 452 (456)
T ss_pred CCCChHHhC---CcEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCH--HHHHHHHHH
Confidence 999888873 7999999999999999998873 57889999999999998 56888 445555544
No 75
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.92 E-value=2.3e-23 Score=235.88 Aligned_cols=272 Identities=14% Similarity=0.138 Sum_probs=186.5
Q ss_pred CceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHH
Q 003987 407 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 486 (781)
Q Consensus 407 kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~ 486 (781)
+||+||++..+........+++.|+|++++-|.+... +...|+.+ . ......++.+|.|++.|....
T Consensus 124 ~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~----s~~~~~~~-------~--~~~r~~~~~~d~ii~~S~~~~ 190 (425)
T PRK05749 124 RPKLVIIMETELWPNLIAELKRRGIPLVLANARLSER----SFKRYQKF-------K--RFYRLLFKNIDLVLAQSEEDA 190 (425)
T ss_pred CCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChh----hHHHHHHH-------H--HHHHHHHHhCCEEEECCHHHH
Confidence 8999998865543333345678899999876644221 11111111 1 123357889999999998876
Q ss_pred hhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCC
Q 003987 487 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGT 566 (781)
Q Consensus 487 ~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~ 566 (781)
+...+ .|++ .. +.+++|+ +.+.+.+....... .. .++.++
T Consensus 191 ~~l~~--------------------~g~~--~~-i~vi~n~-~~d~~~~~~~~~~~-~~--------------~r~~~~- 230 (425)
T PRK05749 191 ERFLA--------------------LGAK--NE-VTVTGNL-KFDIEVPPELAARA-AT--------------LRRQLA- 230 (425)
T ss_pred HHHHH--------------------cCCC--CC-cEecccc-cccCCCChhhHHHH-HH--------------HHHHhc-
Confidence 52211 1332 44 7788874 33333222111110 00 012233
Q ss_pred CCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003987 567 LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (781)
Q Consensus 567 l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~fl 646 (781)
+++++++++|+. .|+.+.+++|+.++.+..|+++|+|+|+|+. ..++++++++++|+. .+.|.
T Consensus 231 ---~~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~-----------r~~~l~~~~~~~gl~-~~~~~ 293 (425)
T PRK05749 231 ---PNRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPE-----------RFKEVEELLKKAGLS-YVRRS 293 (425)
T ss_pred ---CCCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChh-----------hHHHHHHHHHhCCCc-EEEcc
Confidence 356788888764 6889999999999887789999999999875 125788889999885 35555
Q ss_pred ccccCc--------CChHHHHHHHHccCcEEE-EcCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccC-CeEEEECC
Q 003987 647 AAQTNR--------ARNGELYRYIADTKGAFV-QPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHG-ASGFHIDP 715 (781)
Q Consensus 647 G~~~~~--------v~~~el~~~la~aadvfV-~PS~~E~fGltvlEAMa~GlPVVaT~~-gG~~EiI~dg-~~G~lv~p 715 (781)
|..... -..+++..+|+. +|+++ .||..|++|.+++|||+||+|||++.. ++..|+++.. .+|+++++
T Consensus 294 ~~~~~~~~~~v~l~~~~~el~~~y~~-aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~ 372 (425)
T PRK05749 294 QGEPPSADTDVLLGDTMGELGLLYAI-ADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQV 372 (425)
T ss_pred CCCCCCCCCcEEEEecHHHHHHHHHh-CCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEE
Confidence 421100 024689999995 99954 478889999999999999999999854 6677766553 46888889
Q ss_pred CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHh
Q 003987 716 YHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYER 753 (781)
Q Consensus 716 ~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ 753 (781)
+|+++++++|.+++ +||+.+++|+++|++.+.++
T Consensus 373 ~d~~~La~~l~~ll----~~~~~~~~m~~~a~~~~~~~ 406 (425)
T PRK05749 373 EDAEDLAKAVTYLL----TDPDARQAYGEAGVAFLKQN 406 (425)
T ss_pred CCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHhC
Confidence 99999999998887 89999999999999999654
No 76
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.90 E-value=1.9e-23 Score=206.12 Aligned_cols=160 Identities=28% Similarity=0.482 Sum_probs=144.1
Q ss_pred CCCCCEEEEEeeccCCCChHHHHHHHHHhhcc-CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003987 569 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQL-RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (781)
Q Consensus 569 ~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~-~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG 647 (781)
+.++++|+++||+++.||++.+++++..+.+. .+++.|+|+|.+.. ...+...++.+++.++|+|+|
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~i~~~~ 79 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEY------------KKELKNLIEKLNLKENIIFLG 79 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCH------------HHHHHHHHHHTTCGTTEEEEE
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccc------------ccccccccccccccccccccc
Confidence 56788999999999999999999999999763 68899999996644 677889999999999999999
Q ss_pred cccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHH
Q 003987 648 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMAD 727 (781)
Q Consensus 648 ~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~ 727 (781)
..+.+++..++.. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|+++++.|+++++++|..
T Consensus 80 ----~~~~~~l~~~~~~-~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~ 154 (172)
T PF00534_consen 80 ----YVPDDELDELYKS-SDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIEK 154 (172)
T ss_dssp ----SHSHHHHHHHHHH-TSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHHH
T ss_pred ----ccccccccccccc-ceeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHHH
Confidence 5557799999995 99999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHhccCCHHHHHHHHHHHHHH
Q 003987 728 FFGKCKENPSHWKKISDGGLKR 749 (781)
Q Consensus 728 ~l~~l~~dp~~~~~~s~~a~~~ 749 (781)
++ .+++.++.|+++|++|
T Consensus 155 ~l----~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 155 LL----NDPELRQKLGKNARER 172 (172)
T ss_dssp HH----HHHHHHHHHHHHHHHH
T ss_pred HH----CCHHHHHHHHHHhcCC
Confidence 88 7899999999999875
No 77
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.89 E-value=5.4e-22 Score=239.12 Aligned_cols=321 Identities=13% Similarity=0.118 Sum_probs=212.7
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHh
Q 003987 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (781)
Q Consensus 395 ~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~ 473 (781)
.++..+.+... .-|+|-.|.+...+++..+.++. ..++.+..|..++.. .++. -+.....-+..|-
T Consensus 136 ~FA~~i~~~~~-~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs~----e~fr--------~lp~r~~il~gll 202 (797)
T PLN03063 136 MFLDVVKENYE-EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSS----EIYK--------TLPSRSELLRAVL 202 (797)
T ss_pred HHHHHHHHhcC-CCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCCH----HHHh--------hCCCHHHHHHHHh
Confidence 34444444432 34899999999888877777664 688999999765532 2221 1111123345788
Q ss_pred hCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHH---HHHHhhhhcch
Q 003987 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK---QKRLTALHGSI 550 (781)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~---~~r~~~~~~~i 550 (781)
.||.|-+.|+..+..+.+......... .+..++ ...|- ..++.++|||||.+.|.+.... ..+...+
T Consensus 203 ~aDligF~t~~y~r~Fl~~~~r~l~~~-~~~~~i--~~~gr---~~~I~viP~GID~~~f~~~~~~~~~~~~~~~l---- 272 (797)
T PLN03063 203 TADLIGFHTYDFARHFLSACTRILGVE-GTHEGV--VDQGK---VTRVAVFPIGIDPERFINTCELPEVKQHMKEL---- 272 (797)
T ss_pred cCCEEEeCCHHHHHHHHHHHHHHhCcc-ccCCce--EECCe---EEEEEEEecccCHHHHHHHhcChhHHHHHHHH----
Confidence 899999999877654333221110000 000110 01111 3478899999999887653221 1111100
Q ss_pred hhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCe----EEEEEeCcCCCCCCcchHHHHH
Q 003987 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELV----NLVVVAGYIDVNKSKDREEIAE 626 (781)
Q Consensus 551 ~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v----~LvIVG~g~~~~~~~d~ee~~~ 626 (781)
++. ..++++|+++||+++.||+..+++||+++.+.+|++ .|++++.... ... .+
T Consensus 273 ----------r~~-----~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr---~~~----~~ 330 (797)
T PLN03063 273 ----------KRF-----FAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTR---NDV----PE 330 (797)
T ss_pred ----------HHh-----cCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCC---Cch----HH
Confidence 011 135789999999999999999999999998877765 3554443211 111 22
Q ss_pred HHHHHHHHHHcC--CC---CcEEEecc--ccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCc----EEEc
Q 003987 627 IEKMHELMKTYK--LD---GQFRWIAA--QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFAT 695 (781)
Q Consensus 627 ~~~l~~li~elg--L~---~~V~flG~--~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP----VVaT 695 (781)
.+.+++.++++. +. +.+.|.+. ....++.+++..+|+ ++|+||+||.+||||++++||||||+| +|+|
T Consensus 331 y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~-~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlS 409 (797)
T PLN03063 331 YQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYA-ITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLS 409 (797)
T ss_pred HHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHH-hCCEEEeCccccccCcchhhHheeecCCCCCEEee
Confidence 344455555442 22 22333331 113678899999999 599999999999999999999999999 9999
Q ss_pred CccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 696 CHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 696 ~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
..+|.++.+ +.+|++++|.|++++|++|.++++ .+++.+++..+.+++++ .++||.. +++.+.+.+
T Consensus 410 e~~G~~~~l--~~~allVnP~D~~~lA~AI~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~--Wa~~fl~~l 475 (797)
T PLN03063 410 EFAGAGQSL--GAGALLVNPWNITEVSSAIKEALN---MSDEERETRHRHNFQYV-KTHSAQK--WADDFMSEL 475 (797)
T ss_pred CCcCchhhh--cCCeEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHHhh-hhCCHHH--HHHHHHHHH
Confidence 999999976 567999999999999999998883 48889999999999988 7789954 445544444
No 78
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.89 E-value=1.8e-21 Score=217.00 Aligned_cols=261 Identities=12% Similarity=0.077 Sum_probs=173.5
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHH
Q 003987 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (781)
Q Consensus 406 ~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (781)
.+||+||++++..++.....++..++|++++.++....+ .++.+.+|.++++|+..
T Consensus 103 ~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~~------------------------~~~~~~ad~i~~~s~~~ 158 (380)
T PRK13609 103 EKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLHK------------------------IWVHREVDRYFVATDHV 158 (380)
T ss_pred hCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCCc------------------------ccccCCCCEEEECCHHH
Confidence 489999998776655444444456799886665432110 12456899999999876
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccC
Q 003987 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (781)
Q Consensus 486 ~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g 565 (781)
.+.+. ..|++ ..|+.++.+.++.....+..... . ++++|
T Consensus 159 ~~~l~--------------------~~gi~--~~ki~v~G~p~~~~f~~~~~~~~--~-----------------~~~~~ 197 (380)
T PRK13609 159 KKVLV--------------------DIGVP--PEQVVETGIPIRSSFELKINPDI--I-----------------YNKYQ 197 (380)
T ss_pred HHHHH--------------------HcCCC--hhHEEEECcccChHHcCcCCHHH--H-----------------HHHcC
Confidence 54211 12443 66888876655432211111111 1 13466
Q ss_pred CCCCCCCCE-EEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003987 566 TLSDRSKPI-VFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (781)
Q Consensus 566 ~l~~~~k~i-Il~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~ 644 (781)
+ ++++++ +++.|++...||+..+++++.+. ++++++++|++.. ...+++++++++++ ++|+
T Consensus 198 l--~~~~~~il~~~G~~~~~k~~~~li~~l~~~----~~~~~viv~G~~~----------~~~~~l~~~~~~~~--~~v~ 259 (380)
T PRK13609 198 L--CPNKKILLIMAGAHGVLGNVKELCQSLMSV----PDLQVVVVCGKNE----------ALKQSLEDLQETNP--DALK 259 (380)
T ss_pred C--CCCCcEEEEEcCCCCCCcCHHHHHHHHhhC----CCcEEEEEeCCCH----------HHHHHHHHHHhcCC--CcEE
Confidence 6 445554 55668898899999999987642 5789988865432 23456777776655 6899
Q ss_pred EeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-cccc----ccccccCCeEEEECCCCHH
Q 003987 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGGP----AEIIEHGASGFHIDPYHPD 719 (781)
Q Consensus 645 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~-~gG~----~EiI~dg~~G~lv~p~d~~ 719 (781)
|+|++. ++..+++ ++|++|. ++.|++++|||+||+|||+++ .+|. .+.+.+ +|+.+.+.|++
T Consensus 260 ~~g~~~------~~~~l~~-~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~~~~~~~ 326 (380)
T PRK13609 260 VFGYVE------NIDELFR-VTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAVVIRDDE 326 (380)
T ss_pred EEechh------hHHHHHH-hccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEEEECCHH
Confidence 999643 4677888 5999885 456999999999999999985 5553 223432 35555567999
Q ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 720 ~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
+++++|.+++ .|++.+++|++++++.. ..++++ .+++.+.+++
T Consensus 327 ~l~~~i~~ll----~~~~~~~~m~~~~~~~~-~~~s~~--~i~~~i~~~~ 369 (380)
T PRK13609 327 EVFAKTEALL----QDDMKLLQMKEAMKSLY-LPEPAD--HIVDDILAEN 369 (380)
T ss_pred HHHHHHHHHH----CCHHHHHHHHHHHHHhC-CCchHH--HHHHHHHHhh
Confidence 9999998887 89999999999887755 556664 4555555544
No 79
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.88 E-value=3.7e-20 Score=206.42 Aligned_cols=264 Identities=11% Similarity=0.025 Sum_probs=170.7
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHH
Q 003987 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (781)
Q Consensus 405 ~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (781)
+.+.+|++.+.+....+ ++...+.++|+.+++.......... .. ...+..+++.||.|+|+|..
T Consensus 100 ~~~~~i~~~~~P~~~~~---~~~~~~~~~Vyd~~D~~~~~~~~~~----~~---------~~~e~~~~~~ad~vi~~S~~ 163 (373)
T cd04950 100 GFGRPILWYYTPYTLPV---AALLQASLVVYDCVDDLSAFPGGPP----EL---------LEAERRLLKRADLVFTTSPS 163 (373)
T ss_pred CCCCcEEEEeCccHHHH---HhhcCCCeEEEEcccchhccCCCCH----HH---------HHHHHHHHHhCCEEEECCHH
Confidence 55566666665444332 3335678899998875432211100 00 03466789999999999987
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccccc
Q 003987 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (781)
Q Consensus 485 ~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~ 564 (781)
..+..+ .. .+++.+||||+|.+.|.+........ +.
T Consensus 164 l~~~~~----------------------~~---~~~i~~i~ngvd~~~f~~~~~~~~~~-----------------~~-- 199 (373)
T cd04950 164 LYEAKR----------------------RL---NPNVVLVPNGVDYEHFAAARDPPPPP-----------------AD-- 199 (373)
T ss_pred HHHHHh----------------------hC---CCCEEEcccccCHHHhhcccccCCCh-----------------hH--
Confidence 654111 01 36899999999998886643211000 00
Q ss_pred CCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003987 565 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (781)
Q Consensus 565 g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~ 644 (781)
....++++|+|+|++++.++++.+.++++ ..|+++|+++|++... .... ++...++|+
T Consensus 200 --~~~~~~~~i~y~G~l~~~~d~~ll~~la~----~~p~~~~vliG~~~~~------------~~~~----~~~~~~nV~ 257 (373)
T cd04950 200 --LAALPRPVIGYYGAIAEWLDLELLEALAK----ARPDWSFVLIGPVDVS------------IDPS----ALLRLPNVH 257 (373)
T ss_pred --HhcCCCCEEEEEeccccccCHHHHHHHHH----HCCCCEEEEECCCcCc------------cChh----HhccCCCEE
Confidence 01346789999999999888765555443 3478999999998320 0111 111247899
Q ss_pred EeccccCcCChHHHHHHHHccCcEEEEcCCC-----CCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHH
Q 003987 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFY-----EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPD 719 (781)
Q Consensus 645 flG~~~~~v~~~el~~~la~aadvfV~PS~~-----E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~ 719 (781)
|+| .++.+++..+++. +|++++|+.. +++|++++||||||+|||+|+.++. +..+..+++ .++|++
T Consensus 258 ~~G----~~~~~~l~~~l~~-~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~---~~~~~~~~~-~~~d~~ 328 (373)
T cd04950 258 YLG----PKPYKELPAYLAG-FDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEV---RRYEDEVVL-IADDPE 328 (373)
T ss_pred EeC----CCCHHHHHHHHHh-CCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHH---HhhcCcEEE-eCCCHH
Confidence 999 6778999999995 9999999853 4689999999999999999986544 444444444 456999
Q ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHH
Q 003987 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFV 768 (781)
Q Consensus 720 ~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~l 768 (781)
+++++|.+++. .+.....+ .+.+ +.+.|||++. ++.+++.
T Consensus 329 ~~~~ai~~~l~---~~~~~~~~---~~~~-~~~~~sW~~~--a~~~~~~ 368 (373)
T cd04950 329 EFVAAIEKALL---EDGPARER---RRLR-LAAQNSWDAR--AAEMLEA 368 (373)
T ss_pred HHHHHHHHHHh---cCCchHHH---HHHH-HHHHCCHHHH--HHHHHHH
Confidence 99999988652 22222111 2222 5688999754 3444433
No 80
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.87 E-value=2.1e-20 Score=189.09 Aligned_cols=121 Identities=31% Similarity=0.504 Sum_probs=103.1
Q ss_pred EEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChH
Q 003987 577 SMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNG 656 (781)
Q Consensus 577 ~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~ 656 (781)
++|++.+.||++.+++++..+.+..++++++++|++.+ .......+.+++..++|.++|... +.+
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~~~~~---~~~ 173 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPE------------REYLEELLAALLLLDRVIFLGGLD---PEE 173 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCC------------hHHHHHHHHhcCCcccEEEeCCCC---cHH
Confidence 99999999999999999999988888999999999976 334444466778889999999431 234
Q ss_pred HHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEE
Q 003987 657 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHI 713 (781)
Q Consensus 657 el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv 713 (781)
++..+++ .+|+++.|+..|++|++++|||+||+|||+|+.++..|++.++.+|+++
T Consensus 174 ~~~~~~~-~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 174 LLALLLA-AADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHHHhh-cCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 4444444 5999999999999999999999999999999999999999999999875
No 81
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.87 E-value=8.9e-21 Score=228.28 Aligned_cols=321 Identities=15% Similarity=0.104 Sum_probs=211.0
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHh
Q 003987 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (781)
Q Consensus 395 ~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~ 473 (781)
.++..+.+..+ .-|+|..|.+...+++..+.++. ..++.+..|..++.. .++.. +.....-...|-
T Consensus 122 ~fA~~~~~~~~-~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP~~----~~f~~--------lp~~~~ll~~ll 188 (726)
T PRK14501 122 RFAEAIAAIAR-PGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPSF----EVFRL--------LPWREEILEGLL 188 (726)
T ss_pred HHHHHHHHhcC-CCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCCCh----HHHhh--------CCChHHHHHHHh
Confidence 34444444432 35899999999888888886664 578889999766532 22221 111123345788
Q ss_pred hCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHH---HHHhhhhcch
Q 003987 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ---KRLTALHGSI 550 (781)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~---~r~~~~~~~i 550 (781)
.+|.|-..|......+.+...+..... +-.+ .....|- ..++.++|||+|.+.|.+..... .+...+
T Consensus 189 ~~Dligf~t~~~~r~Fl~~~~~~l~~~--~~~~-~~~~~gr---~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~l---- 258 (726)
T PRK14501 189 GADLIGFHTYDYVRHFLSSVLRVLGYE--TELG-EIRLGGR---IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRL---- 258 (726)
T ss_pred cCCeEEeCCHHHHHHHHHHHHHHcCCc--cCCC-eEEECCE---EEEEEEEECeEcHHHHHHHhcCchHHHHHHHH----
Confidence 899999988876554333222111000 0000 1111121 23688999999999887643211 111100
Q ss_pred hhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHHHHH
Q 003987 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAE 626 (781)
Q Consensus 551 ~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~~~ 626 (781)
++. .+++++|+++||+++.||+..+++|++++.+.+|+ ++|+++|.+.. ..-++..+.
T Consensus 259 ----------r~~-----~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr---~~~~~~~~l 320 (726)
T PRK14501 259 ----------RQD-----LRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSR---TGVPQYQEM 320 (726)
T ss_pred ----------HHH-----cCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC---cchHHHHHH
Confidence 011 24577999999999999999999999998877775 78999985422 001233344
Q ss_pred HHHHHHHHHHcC----C---CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHc-----CCcEEE
Q 003987 627 IEKMHELMKTYK----L---DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTC-----GLPTFA 694 (781)
Q Consensus 627 ~~~l~~li~elg----L---~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~-----GlPVVa 694 (781)
.+.+.+++.+.+ . .+-+.+.| .++.+++..+|+ ++|+||+||..||||++++||||| |.||++
T Consensus 321 ~~~~~~~v~~in~~~~~~~~~pv~~~~~----~~~~~~l~~ly~-~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls 395 (726)
T PRK14501 321 KREIDELVGRINGEFGTVDWTPIHYFYR----SLPFEELVALYR-AADVALVTPLRDGMNLVAKEYVASRTDGDGVLILS 395 (726)
T ss_pred HHHHHHHHHHHHhhcCCCCcceEEEEeC----CCCHHHHHHHHH-hccEEEecccccccCcccceEEEEcCCCCceEEEe
Confidence 455555555432 1 12234555 678899999999 599999999999999999999999 557777
Q ss_pred cCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHh
Q 003987 695 TCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINV 771 (781)
Q Consensus 695 T~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~ 771 (781)
+..|+..+++ .|++++|.|++++|++|.+++. .+++.+.+..+++++++ .+|||+. +++.|.+.+..
T Consensus 396 ~~~G~~~~l~----~~llv~P~d~~~la~ai~~~l~---~~~~e~~~r~~~~~~~v-~~~~~~~--w~~~~l~~l~~ 462 (726)
T PRK14501 396 EMAGAAAELA----EALLVNPNDIEGIAAAIKRALE---MPEEEQRERMQAMQERL-RRYDVHK--WASDFLDELRE 462 (726)
T ss_pred cccchhHHhC----cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHH--HHHHHHHHHHH
Confidence 7788888875 4899999999999999998872 33455566667788888 6899955 44555555543
No 82
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.86 E-value=6.2e-20 Score=205.30 Aligned_cols=247 Identities=14% Similarity=0.149 Sum_probs=169.9
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHH-----cCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEE
Q 003987 406 GFPDFIIGNYSDG-NLVASLLAYK-----MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFII 479 (781)
Q Consensus 406 ~kpDIIh~~~~~~-~lva~llar~-----~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~II 479 (781)
.+||+||++++.. ...+..+++. .++|++++++++.... . .+..+.+|.++
T Consensus 99 ~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~--------------~---------~w~~~~~d~~~ 155 (382)
T PLN02605 99 YKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH--------------P---------TWFHKGVTRCF 155 (382)
T ss_pred cCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC--------------c---------ccccCCCCEEE
Confidence 4899999977553 2222333322 4789888776542100 0 12456899999
Q ss_pred ecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccc
Q 003987 480 TSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQ 559 (781)
Q Consensus 480 t~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~ 559 (781)
++|+...+.+. ..|++ .+|+.++++++|.+.+.+......
T Consensus 156 ~~s~~~~~~l~--------------------~~g~~--~~ki~v~g~~v~~~f~~~~~~~~~------------------ 195 (382)
T PLN02605 156 CPSEEVAKRAL--------------------KRGLE--PSQIRVYGLPIRPSFARAVRPKDE------------------ 195 (382)
T ss_pred ECCHHHHHHHH--------------------HcCCC--HHHEEEECcccCHhhccCCCCHHH------------------
Confidence 99987654211 12444 679999999998765443322211
Q ss_pred cccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh----ccCCCeE-EEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003987 560 NDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS----QLRELVN-LVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (781)
Q Consensus 560 ~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~----~~~~~v~-LvIVG~g~~~~~~~d~ee~~~~~~l~~li 634 (781)
.++.+|+ ++++++|+++|+....|++..+++++.... ...++.+ ++++|.+.. ..+.+++.
T Consensus 196 ~r~~~gl--~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~-----------~~~~L~~~- 261 (382)
T PLN02605 196 LRRELGM--DEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK-----------LQSKLESR- 261 (382)
T ss_pred HHHHcCC--CCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH-----------HHHHHHhh-
Confidence 1244777 677899999999999999999999997653 1135565 556665521 12333332
Q ss_pred HHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCc------cccccccccCC
Q 003987 635 KTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH------GGPAEIIEHGA 708 (781)
Q Consensus 635 ~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~------gG~~EiI~dg~ 708 (781)
....+|+|+|+++ ++..+|+ ++|++|.++ .|+|++|||+||+|+|+|+. |+. +.+.+++
T Consensus 262 ---~~~~~v~~~G~~~------~~~~l~~-aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~~g 326 (382)
T PLN02605 262 ---DWKIPVKVRGFVT------NMEEWMG-ACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVDNG 326 (382)
T ss_pred ---cccCCeEEEeccc------cHHHHHH-hCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH-HHHHhCC
Confidence 2345799999653 5888888 599999865 48999999999999999983 444 3444555
Q ss_pred eEEEECCCCHHHHHHHHHHHHHhccCC-HHHHHHHHHHHHHHH
Q 003987 709 SGFHIDPYHPDQAAELMADFFGKCKEN-PSHWKKISDGGLKRI 750 (781)
Q Consensus 709 ~G~lv~p~d~~~lA~~I~~~l~~l~~d-p~~~~~~s~~a~~~~ 750 (781)
.|+.+ .|+++++++|.+++ .| ++.+++|++++++++
T Consensus 327 ~g~~~--~~~~~la~~i~~ll----~~~~~~~~~m~~~~~~~~ 363 (382)
T PLN02605 327 FGAFS--ESPKEIARIVAEWF----GDKSDELEAMSENALKLA 363 (382)
T ss_pred ceeec--CCHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhc
Confidence 67654 79999999998887 66 999999999998877
No 83
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.82 E-value=6.2e-19 Score=197.96 Aligned_cols=276 Identities=14% Similarity=0.140 Sum_probs=181.3
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhh
Q 003987 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (781)
Q Consensus 395 ~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~ 474 (781)
.+.+.+.+ .+||+||++.+.+++.....++..++|+++..++..... . +..+.
T Consensus 95 ~l~~~l~~---~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~~------~------------------w~~~~ 147 (391)
T PRK13608 95 KLINLLIK---EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLHK------N------------------WITPY 147 (391)
T ss_pred HHHHHHHH---hCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCccc------c------------------cccCC
Confidence 34444444 499999998666543333333445899865544321100 0 23457
Q ss_pred CCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhc
Q 003987 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLL 554 (781)
Q Consensus 475 AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l 554 (781)
+|.+++.|+.....+ ...|++ ..|+.++.++++.....+......
T Consensus 148 ~d~~~v~s~~~~~~l--------------------~~~gi~--~~ki~v~GiPv~~~f~~~~~~~~~------------- 192 (391)
T PRK13608 148 STRYYVATKETKQDF--------------------IDVGID--PSTVKVTGIPIDNKFETPIDQKQW------------- 192 (391)
T ss_pred CCEEEECCHHHHHHH--------------------HHcCCC--HHHEEEECeecChHhcccccHHHH-------------
Confidence 999999998765521 112444 678888877776443222221111
Q ss_pred cCccccccccCCCCCCCCCE-EEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHH
Q 003987 555 FDPEQNDEHVGTLSDRSKPI-VFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHEL 633 (781)
Q Consensus 555 ~~~~~~~~~~g~l~~~~k~i-Il~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~l 633 (781)
+.++|+ ++++++ +++.|+++..||+..+++++.+ ..+++++++++++.. +...++
T Consensus 193 ------~~~~~l--~~~~~~ilv~~G~lg~~k~~~~li~~~~~---~~~~~~~vvv~G~~~-------------~l~~~l 248 (391)
T PRK13608 193 ------LIDNNL--DPDKQTILMSAGAFGVSKGFDTMITDILA---KSANAQVVMICGKSK-------------ELKRSL 248 (391)
T ss_pred ------HHHcCC--CCCCCEEEEECCCcccchhHHHHHHHHHh---cCCCceEEEEcCCCH-------------HHHHHH
Confidence 123566 445554 5678999999999999998632 335788887765432 112233
Q ss_pred HHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-ccc----cccccccCC
Q 003987 634 MKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGG----PAEIIEHGA 708 (781)
Q Consensus 634 i~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~-~gG----~~EiI~dg~ 708 (781)
.+.++..++|.++|++ +++..+|+ ++|++|. ++.|+|+.|||+||+|+|+++ .+| ....+.+.+
T Consensus 249 ~~~~~~~~~v~~~G~~------~~~~~~~~-~aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G 317 (391)
T PRK13608 249 TAKFKSNENVLILGYT------KHMNEWMA-SSQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKG 317 (391)
T ss_pred HHHhccCCCeEEEecc------chHHHHHH-hhhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCC
Confidence 3344555789999964 35788888 4999997 356999999999999999996 333 222344555
Q ss_pred eEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHhcCCCC
Q 003987 709 SGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINVISMPT 776 (781)
Q Consensus 709 ~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~~~~~~ 776 (781)
.|+.. .|+++++++|.+++ +|++.+++|++++++.. +.|+| ..+++.|.+++..++.++
T Consensus 318 ~g~~~--~~~~~l~~~i~~ll----~~~~~~~~m~~~~~~~~-~~~s~--~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 318 FGKIA--DTPEEAIKIVASLT----NGNEQLTNMISTMEQDK-IKYAT--QTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred cEEEe--CCHHHHHHHHHHHh----cCHHHHHHHHHHHHHhc-CCCCH--HHHHHHHHHHhhhhhhhh
Confidence 66654 58999999998887 89999999999999876 56877 556777888776655444
No 84
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.82 E-value=2.6e-18 Score=181.19 Aligned_cols=289 Identities=22% Similarity=0.287 Sum_probs=205.3
Q ss_pred ceEEEEcCCCchH---HHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHH
Q 003987 408 PDFIIGNYSDGNL---VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (781)
Q Consensus 408 pDIIh~~~~~~~l---va~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (781)
+|+++.+...... .........+.+.+...|....................+.+. .......+.++.+++.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 160 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLLK---RLKKALRLLADRVIAVSPA 160 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccchhhHHHHHHHHH---HHHHhccccccEEEECCHH
Confidence 5999987765533 455566667888888888765433211111110000000000 0011111247778888765
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccccc
Q 003987 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (781)
Q Consensus 485 ~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~ 564 (781)
.....+. ... ..++.+++|+++.+.+.+.. .
T Consensus 161 ~~~~~~~--------------------~~~---~~~~~~~~~~~~~~~~~~~~--------------------------~ 191 (381)
T COG0438 161 LKELLEA--------------------LGV---PNKIVVIPNGIDTEKFAPAR--------------------------I 191 (381)
T ss_pred HHHHHHH--------------------hCC---CCCceEecCCcCHHHcCccc--------------------------c
Confidence 4221000 011 23788999999988776530 1
Q ss_pred CCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003987 565 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (781)
Q Consensus 565 g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~ 644 (781)
++.......+++++||+.+.||++.+++++..+.+..+++.++++|.+... .+.+..++.+++..++|.
T Consensus 192 ~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~-----------~~~~~~~~~~~~~~~~v~ 260 (381)
T COG0438 192 GLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER-----------REELEKLAKKLGLEDNVK 260 (381)
T ss_pred CCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc-----------HHHHHHHHHHhCCCCcEE
Confidence 111111246899999999999999999999999887667999999999761 345666888888888999
Q ss_pred EeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHH
Q 003987 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAEL 724 (781)
Q Consensus 645 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~ 724 (781)
|+| .++.+++..+++. +|++++||.+|+||++++|||+||+|||+|+.++..|++.++.+|+++++.|.++++++
T Consensus 261 ~~g----~~~~~~~~~~~~~-~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~ 335 (381)
T COG0438 261 FLG----YVPDEELAELLAS-ADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADA 335 (381)
T ss_pred Eec----ccCHHHHHHHHHh-CCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHH
Confidence 999 4556688888885 89999999999999999999999999999999999999998878997777789999999
Q ss_pred HHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 725 MADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 725 I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
+..++ ++++.++.+++.+++.+.+.|+|+... +.|.+++.
T Consensus 336 i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 375 (381)
T COG0438 336 LEQLL----EDPELREELGEAARERVEEEFSWERIA--EQLLELYE 375 (381)
T ss_pred HHHHh----cCHHHHHHHHHHHHHHHHHhcCHHHHH--HHHHHHHH
Confidence 98887 677889999987788887899997753 45555543
No 85
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.81 E-value=1e-17 Score=190.81 Aligned_cols=304 Identities=11% Similarity=0.043 Sum_probs=209.6
Q ss_pred CceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHH
Q 003987 407 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (781)
Q Consensus 407 kpDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (781)
.-|+|-.|.....+++..+.++. ..++-+..|..++.. .++. .+..-..-+..|-.||.|=..|+..
T Consensus 132 ~~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPFPs~----eifr--------~LP~r~~ll~glL~aDliGFqt~~y 199 (487)
T TIGR02398 132 EGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPSA----DVFN--------ILPWREQIIGSLLCCDYIGFHIPRY 199 (487)
T ss_pred CCCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCCCCh----HHHh--------hCCchHHHHHHHhcCCeEEeCCHHH
Confidence 45899999999888888886653 467888888765532 2221 1112223445788899999999877
Q ss_pred Hhhcccccccccccccccc----ccc--e-------eeeccCCCCC--CceEEecCCCcCCCCCCCcH---HHHHHhhhh
Q 003987 486 IAGTKNTVGQYESHTAFTL----PGL--Y-------RVVHGIDVFD--PKFNIVSPGADMDIYFPYSE---KQKRLTALH 547 (781)
Q Consensus 486 ~~~~k~~v~qyes~~~f~l----~~l--y-------~v~~gi~~f~--~k~~VIpnGvD~~~f~p~~~---~~~r~~~~~ 547 (781)
+..+.+.+.+......-.- ++. + ....++.... -++.++|.|||.+.|.+... ...+...
T Consensus 200 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~-- 277 (487)
T TIGR02398 200 VENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMER-- 277 (487)
T ss_pred HHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHH--
Confidence 7654444332211000000 000 0 0000111112 25778999999998855321 1111111
Q ss_pred cchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHH
Q 003987 548 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREE 623 (781)
Q Consensus 548 ~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee 623 (781)
.++++| ++++|++++|++..||+...++||+++.+.+|+ +.|++||.... +..+++
T Consensus 278 ------------lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr---~~v~~y 337 (487)
T TIGR02398 278 ------------IRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAA---SGMTIY 337 (487)
T ss_pred ------------HHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCc---ccchHH
Confidence 112233 578999999999999999999999999887785 79999988653 334555
Q ss_pred HHHHHHHHHHHHHc-------CCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCC----cE
Q 003987 624 IAEIEKMHELMKTY-------KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL----PT 692 (781)
Q Consensus 624 ~~~~~~l~~li~el-------gL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl----PV 692 (781)
.+..+++.+++.+. +..+-+.+.+ .++.+++..+|+ .||+++.||..||++++..|+|+|+. |+
T Consensus 338 ~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~----~v~~~el~alYr-~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvL 412 (487)
T TIGR02398 338 DELQGQIEQAVGRINGRFARIGWTPLQFFTR----SLPYEEVSAWFA-MADVMWITPLRDGLNLVAKEYVAAQGLLDGVL 412 (487)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCccEEEEcC----CCCHHHHHHHHH-hCCEEEECccccccCcchhhHHhhhcCCCCCE
Confidence 66677777777765 3344456666 788999999999 59999999999999999999999998 99
Q ss_pred EEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCc
Q 003987 693 FATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVV 756 (781)
Q Consensus 693 VaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw 756 (781)
|.|..+|.++.+ ..+++++|.|++++|++|.+.++ ..++.+++..+..++++ .++|.
T Consensus 413 ILSefaGaa~~l---~~AllVNP~d~~~~A~ai~~AL~---m~~~Er~~R~~~l~~~v-~~~d~ 469 (487)
T TIGR02398 413 VLSEFAGAAVEL---KGALLTNPYDPVRMDETIYVALA---MPKAEQQARMREMFDAV-NYYDV 469 (487)
T ss_pred EEeccccchhhc---CCCEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCH
Confidence 999999998776 35899999999999999998884 55566666666667766 44443
No 86
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.80 E-value=1.2e-17 Score=195.33 Aligned_cols=348 Identities=14% Similarity=0.127 Sum_probs=232.2
Q ss_pred HHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH--------------cCCcEEEEecCCcccCC---CCChhhHh--
Q 003987 393 TEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK--------------MGITQCTIAHALEKTKY---PDSDIYWK-- 453 (781)
Q Consensus 393 ~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~--------------~gvp~v~t~H~l~~~k~---~~s~~~~k-- 453 (781)
.....+.++ .+..+||+||+|.+.++++...+.+. ...+.++|.|++.+... +. +...+
T Consensus 148 ~~a~l~~l~-~l~~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~-~~~~~~~ 225 (601)
T TIGR02094 148 GIGGVRALR-ALGIDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPE-DLMRKYF 225 (601)
T ss_pred HHHHHHHHH-HcCCCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCH-HHHHHHh
Confidence 333444443 34679999999999998777665332 13668999999766542 21 11110
Q ss_pred ------------hhh---ccc-cchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003987 454 ------------KFD---EKY-HFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (781)
Q Consensus 454 ------------~~~---~~y-~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f 517 (781)
.+. ..+ ....++..-..++..||.|.++|.....-.++..+.+ +. +....
T Consensus 226 ~~~~~~~gl~~~~~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l-----------~~---~~~~~ 291 (601)
T TIGR02094 226 GDYAANLGLPREQLLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFL-----------YP---GYEEE 291 (601)
T ss_pred hhhhhHhCCCHHHHHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhh-----------hh---hcccc
Confidence 000 000 0001234456788999999999986654222211111 10 11111
Q ss_pred CCceEEecCCCcCCCCCCCcHHHHHH----------------------------hhhhcchhhhccC-------------
Q 003987 518 DPKFNIVSPGADMDIYFPYSEKQKRL----------------------------TALHGSIEQLLFD------------- 556 (781)
Q Consensus 518 ~~k~~VIpnGvD~~~f~p~~~~~~r~----------------------------~~~~~~i~~~l~~------------- 556 (781)
..++.-|.||||...+.|.+...-.. .+.+...++.|..
T Consensus 292 ~~~i~gItNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~ 371 (601)
T TIGR02094 292 EVPIGYVTNGVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRR 371 (601)
T ss_pred cCCccceeCCccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Confidence 33588899999999887754332110 0111111111110
Q ss_pred --ccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhcc--C--CCeEEEEEeCcCCCCCCcchHHHHHHHHH
Q 003987 557 --PEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL--R--ELVNLVVVAGYIDVNKSKDREEIAEIEKM 630 (781)
Q Consensus 557 --~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~--~--~~v~LvIVG~g~~~~~~~d~ee~~~~~~l 630 (781)
..+.-..+|+..+++.+++++++|+..+||.+.+++++.++.+. . .+++||+.|.+.. .|..-++.++.+
T Consensus 372 g~~~~~~~~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p----~d~~gk~~i~~i 447 (601)
T TIGR02094 372 GADAAILMATDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHP----ADGEGKEIIQRI 447 (601)
T ss_pred cCcchhhhhhccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc----ccchHHHHHHHH
Confidence 00000135555678999999999999999999999998887641 1 3599999999965 344556678888
Q ss_pred HHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEE-cCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCC
Q 003987 631 HELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQ-PAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGA 708 (781)
Q Consensus 631 ~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~-PS~-~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~ 708 (781)
.+++++....++|.|+- . -+..+.+.|-.++|++++ ||. +|++|++=+=||..|.+.+++..|...|.. ++.
T Consensus 448 ~~la~~~~~~~kv~f~~----~-Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~ 521 (601)
T TIGR02094 448 VEFSKRPEFRGRIVFLE----N-YDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGD 521 (601)
T ss_pred HHHHhcccCCCCEEEEc----C-CCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCC
Confidence 88888755678999985 2 245666666667999999 999 999999999999999999999999988876 678
Q ss_pred eEEEECC------------CCHHHHHHHHHHHH-HhccCC-----HHHHHHHHHHHHHHHHHhcCcchhhhccchHHH
Q 003987 709 SGFHIDP------------YHPDQAAELMADFF-GKCKEN-----PSHWKKISDGGLKRIYERLVVSSDGIVDPSPFV 768 (781)
Q Consensus 709 ~G~lv~p------------~d~~~lA~~I~~~l-~~l~~d-----p~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~l 768 (781)
|||.|.+ .|.+++-++|.+.+ ....++ |..|.+|.++|.+.....|||++| ++.|.++
T Consensus 522 nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~--a~~Y~~~ 597 (601)
T TIGR02094 522 NGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRM--VREYVDK 597 (601)
T ss_pred cEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHH--HHHHHHH
Confidence 9999984 79999999997655 323343 667999999999887778999765 4556554
No 87
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.78 E-value=2.7e-17 Score=180.81 Aligned_cols=234 Identities=12% Similarity=0.117 Sum_probs=161.1
Q ss_pred Cc-eEEEEcCCCch---HHHHHH--HHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEe
Q 003987 407 FP-DFIIGNYSDGN---LVASLL--AYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480 (781)
Q Consensus 407 kp-DIIh~~~~~~~---lva~ll--ar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt 480 (781)
++ |+||.+++... +...++ .++.|+|+++++|++++........ . ...+...++.||.||+
T Consensus 63 ~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~~~-----------~--~~~~~~~~~~aD~iI~ 129 (333)
T PRK09814 63 KPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSNYY-----------L--MKEEIDMLNLADVLIV 129 (333)
T ss_pred CCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccccch-----------h--hHHHHHHHHhCCEEEE
Confidence 56 99999887642 122222 2344799999999987643211100 0 1235678899999999
Q ss_pred cCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccc
Q 003987 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (781)
Q Consensus 481 ~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 560 (781)
.|....+.+++ .|+. ..++.++++..+.....+.
T Consensus 130 ~S~~~~~~l~~--------------------~g~~--~~~i~~~~~~~~~~~~~~~------------------------ 163 (333)
T PRK09814 130 HSKKMKDRLVE--------------------EGLT--TDKIIVQGIFDYLNDIELV------------------------ 163 (333)
T ss_pred CCHHHHHHHHH--------------------cCCC--cCceEeccccccccccccc------------------------
Confidence 99987663221 2332 4567666655433111000
Q ss_pred ccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003987 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (781)
Q Consensus 561 ~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~ 640 (781)
. ....++.|+|+|++...+++. ...++++|+|+|+|+. .+ ...
T Consensus 164 -~-----~~~~~~~i~yaG~l~k~~~l~----------~~~~~~~l~i~G~g~~------------~~---------~~~ 206 (333)
T PRK09814 164 -K-----TPSFQKKINFAGNLEKSPFLK----------NWSQGIKLTVFGPNPE------------DL---------ENS 206 (333)
T ss_pred -c-----cccCCceEEEecChhhchHHH----------hcCCCCeEEEECCCcc------------cc---------ccC
Confidence 0 023456899999999543211 1236799999999976 11 345
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcC-C----------CCCCcHHHHHHHHcCCcEEEcCccccccccccCCe
Q 003987 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPA-F----------YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGAS 709 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS-~----------~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~ 709 (781)
++|.|+| .++.+++..+++. |+.+.+. . .-++|.++.|+||||+|||+++.++..|+|+++.+
T Consensus 207 ~~V~f~G----~~~~eel~~~l~~--~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~ 280 (333)
T PRK09814 207 ANISYKG----WFDPEELPNELSK--GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGL 280 (333)
T ss_pred CCeEEec----CCCHHHHHHHHhc--CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCc
Confidence 7899999 6778999999985 4433332 1 13578899999999999999999999999999999
Q ss_pred EEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 003987 710 GFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (781)
Q Consensus 710 G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~ 750 (781)
|++++ +.++++++|..+ +++.+++|++++++.+
T Consensus 281 G~~v~--~~~el~~~l~~~------~~~~~~~m~~n~~~~~ 313 (333)
T PRK09814 281 GFVVD--SLEELPEIIDNI------TEEEYQEMVENVKKIS 313 (333)
T ss_pred eEEeC--CHHHHHHHHHhc------CHHHHHHHHHHHHHHH
Confidence 99998 778899988653 4577899999999877
No 88
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.77 E-value=3.5e-17 Score=182.19 Aligned_cols=249 Identities=14% Similarity=0.152 Sum_probs=161.5
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHH
Q 003987 406 GFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (781)
Q Consensus 406 ~kpDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (781)
.+||+||++.+.+ +......+++.|+|+++..+.. .|...... . ....+.+|.++++++.
T Consensus 84 ~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~----------~~~~~~~~--------~-~~~~~~~d~i~~~~~~ 144 (380)
T PRK00025 84 EPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPS----------VWAWRQGR--------A-FKIAKATDHVLALFPF 144 (380)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCc----------hhhcCchH--------H-HHHHHHHhhheeCCcc
Confidence 4899999876432 3333345667799988765431 11100000 0 1236678999998875
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccccc
Q 003987 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (781)
Q Consensus 485 ~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~ 564 (781)
..+. +.. .|+ ++.++.|.+......+..... .++++
T Consensus 145 ~~~~-------~~~-------------~g~-----~~~~~G~p~~~~~~~~~~~~~-------------------~~~~l 180 (380)
T PRK00025 145 EAAF-------YDK-------------LGV-----PVTFVGHPLADAIPLLPDRAA-------------------ARARL 180 (380)
T ss_pred CHHH-------HHh-------------cCC-----CeEEECcCHHHhcccccChHH-------------------HHHHc
Confidence 5431 100 121 345555554332211111111 11346
Q ss_pred CCCCCCCCCEEE-EEe-eccCC-CChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc-CCC
Q 003987 565 GTLSDRSKPIVF-SMA-RLDHV-KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY-KLD 640 (781)
Q Consensus 565 g~l~~~~k~iIl-~vG-RL~~~-Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el-gL~ 640 (781)
|+ ++++++++ +.| |.... +++..++++++++.+..++++++++|+++. ..+.++++++++ ++.
T Consensus 181 ~~--~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~-----------~~~~~~~~~~~~~~~~ 247 (380)
T PRK00025 181 GL--DPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK-----------RREQIEEALAEYAGLE 247 (380)
T ss_pred CC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh-----------hHHHHHHHHhhcCCCC
Confidence 65 45566654 444 44443 457899999999877778899999987432 145566667766 553
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc-----------------Cccccccc
Q 003987 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-----------------CHGGPAEI 703 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT-----------------~~gG~~Ei 703 (781)
+.+.. +++..+|+ .+|++|.+| |.+.+|||+||+|+|++ +.++.+++
T Consensus 248 --v~~~~--------~~~~~~~~-~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (380)
T PRK00025 248 --VTLLD--------GQKREAMA-AADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNL 311 (380)
T ss_pred --eEEEc--------ccHHHHHH-hCCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHH
Confidence 55543 36788888 499999997 88989999999999987 56777888
Q ss_pred cccCC--eEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 003987 704 IEHGA--SGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (781)
Q Consensus 704 I~dg~--~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~ 750 (781)
+.++. .|++.+..|++++++++.+++ .|++.+++|++++.+..
T Consensus 312 ~~~~~~~~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~ 356 (380)
T PRK00025 312 LAGRELVPELLQEEATPEKLARALLPLL----ADGARRQALLEGFTELH 356 (380)
T ss_pred hcCCCcchhhcCCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHH
Confidence 87764 557778889999999998887 89999999999875544
No 89
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.76 E-value=3.6e-16 Score=164.40 Aligned_cols=378 Identities=16% Similarity=0.218 Sum_probs=234.7
Q ss_pred ceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCC---ccCccee
Q 003987 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGT---TCNQRLE 354 (781)
Q Consensus 278 ~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~---~~~~~~e 354 (781)
...++++.|..- ..||.++..+--+|++.+. -..+-. +|+|..+.-.... ...+..+
T Consensus 43 ~ktvgfFHPYCN----------AGGGGErVLW~Avr~~q~k------~~n~~~----viYsGD~n~t~~~IL~k~k~~F~ 102 (465)
T KOG1387|consen 43 VKTVGFFHPYCN----------AGGGGERVLWKAVRITQRK------FPNNVI----VIYSGDFNVTPENILNKVKNKFD 102 (465)
T ss_pred ceEEEEeccccc----------CCCCcceehhHHHHHHHHh------CCCceE----EEEeCCCCCCHHHHHHHHHHhcC
Confidence 356888866543 3588899999778776322 122223 3666553221100 0001111
Q ss_pred eecCCCCeEEEEeccCCCcccccccccccCchhhH---HHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCC
Q 003987 355 RVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYL---ETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGI 431 (781)
Q Consensus 355 ~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl---~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gv 431 (781)
-.-+..++..+.+..+. |++. .-|+.. -.-...+.-.+.+..+..|||.+-....+ +.--..++..++
T Consensus 103 idlDs~nI~Fi~Lk~R~-------lVea-~~~~hfTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~-fs~p~~r~l~~~ 173 (465)
T KOG1387|consen 103 IDLDSDNIFFIYLKLRY-------LVEA-STWKHFTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYP-FSYPIFRRLRRI 173 (465)
T ss_pred ceecccceEEEEEEeee-------eeec-ccccceehHHHHHHHHHHHHHHHHhCCchheEecCCCc-chhHHHHHHccC
Confidence 11122345555444332 2322 223322 11122222233334466899988433222 111223446789
Q ss_pred cEEEEecCCcccC--------CCCC-hhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhcccccccccccccc
Q 003987 432 TQCTIAHALEKTK--------YPDS-DIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAF 502 (781)
Q Consensus 432 p~v~t~H~l~~~k--------~~~s-~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f 502 (781)
|++...|-.--.+ .+.+ -+.|..+. .|++..+. -..+=..||.++++|.......++.++
T Consensus 174 ~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~Kla-Y~rlFa~l--Y~~~G~~ad~vm~NssWT~nHI~qiW~-------- 242 (465)
T KOG1387|consen 174 PVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLA-YWRLFALL--YQSAGSKADIVMTNSSWTNNHIKQIWQ-------- 242 (465)
T ss_pred ceEEEEecccccHHHHHHHHhhhhcchhhhHHHH-HHHHHHHH--HHhccccceEEEecchhhHHHHHHHhh--------
Confidence 9999888532111 0011 11121111 11111110 113445799999999765443332221
Q ss_pred ccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeecc
Q 003987 503 TLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD 582 (781)
Q Consensus 503 ~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~ 582 (781)
..+..+|+|..+.+... +..+. ...+.+.++++|.+.
T Consensus 243 ---------------~~~~~iVyPPC~~e~lk---------------------------s~~~t-e~~r~~~ll~l~Q~R 279 (465)
T KOG1387|consen 243 ---------------SNTCSIVYPPCSTEDLK---------------------------SKFGT-EGERENQLLSLAQFR 279 (465)
T ss_pred ---------------ccceeEEcCCCCHHHHH---------------------------HHhcc-cCCcceEEEEEeecC
Confidence 23667777766654111 01111 245678899999999
Q ss_pred CCCChHHHHHHHHHhhcc------CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChH
Q 003987 583 HVKNMTGLVECYGKNSQL------RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNG 656 (781)
Q Consensus 583 ~~Kgl~~LieA~~~l~~~------~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~ 656 (781)
+.||+. +++.++-.... .+.++|+|||+... .++.+..+.|++++++++++++|.|-- .+|.+
T Consensus 280 PEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRn------eeD~ervk~Lkd~a~~L~i~~~v~F~~----N~Py~ 348 (465)
T KOG1387|consen 280 PEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRN------EEDEERVKSLKDLAEELKIPKHVQFEK----NVPYE 348 (465)
T ss_pred cccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCC------hhhHHHHHHHHHHHHhcCCccceEEEe----cCCHH
Confidence 999999 65555443332 35689999999876 456677899999999999999999997 78999
Q ss_pred HHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccc-ccccc---CCeEEEECCCCHHHHHHHHHHHHHhc
Q 003987 657 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPA-EIIEH---GASGFHIDPYHPDQAAELMADFFGKC 732 (781)
Q Consensus 657 el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~-EiI~d---g~~G~lv~p~d~~~lA~~I~~~l~~l 732 (781)
++..++.. |.+.|+.-+.|.||+.++|+||+|+-.|+.+.||+. +||.+ ..+||+.+ +.++.|++|.++..
T Consensus 349 ~lv~lL~~-a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iLkIv~-- 423 (465)
T KOG1387|consen 349 KLVELLGK-ATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEEYAEAILKIVK-- 423 (465)
T ss_pred HHHHHhcc-ceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--ChHHHHHHHHHHHH--
Confidence 99999995 999999999999999999999999999999988865 56653 34799985 78899999998875
Q ss_pred cCCHHHHHHHHHHHHHHHHHhcCc
Q 003987 733 KENPSHWKKISDGGLKRIYERLVV 756 (781)
Q Consensus 733 ~~dp~~~~~~s~~a~~~~~~~ysw 756 (781)
.+++.+..|+++||..+ .+|+-
T Consensus 424 -~~~~~r~~~r~~AR~s~-~RFsE 445 (465)
T KOG1387|consen 424 -LNYDERNMMRRNARKSL-ARFGE 445 (465)
T ss_pred -cCHHHHHHHHHHHHHHH-HHhhH
Confidence 78888999999999888 67765
No 90
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.76 E-value=6.3e-17 Score=179.62 Aligned_cols=266 Identities=15% Similarity=0.125 Sum_probs=173.4
Q ss_pred HHHHHHHHHHHcCCCceEEEEcCC-CchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHH
Q 003987 393 TEDVGSEITAELQGFPDFIIGNYS-DGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIA 471 (781)
Q Consensus 393 ~~~~~~~i~~~~~~kpDIIh~~~~-~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a 471 (781)
...+.+.+.+. +||+||+|.. ...+.+.++++..|+|++.+-+++ .+..... .|. +. .. ....
T Consensus 75 ~~~l~~~l~~~---~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~--~~~--~~----~~----r~~~ 138 (365)
T TIGR00236 75 LEGLEELLLEE---KPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYS--PMP--EE----IN----RQLT 138 (365)
T ss_pred HHHHHHHHHHc---CCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCC--CCc--cH----HH----HHHH
Confidence 34444445443 8999999964 346778999999999987654443 1100000 010 00 00 0112
Q ss_pred HhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCC-cCCCCCCCcHHHHHHhhhhcch
Q 003987 472 MNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMDIYFPYSEKQKRLTALHGSI 550 (781)
Q Consensus 472 ~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGv-D~~~f~p~~~~~~r~~~~~~~i 550 (781)
.+.+|.++++|....+.+.+ .|++ ..++.+++||+ |...+.+.......
T Consensus 139 ~~~ad~~~~~s~~~~~~l~~--------------------~G~~--~~~I~vign~~~d~~~~~~~~~~~~~-------- 188 (365)
T TIGR00236 139 GHIADLHFAPTEQAKDNLLR--------------------ENVK--ADSIFVTGNTVIDALLTNVEIAYSSP-------- 188 (365)
T ss_pred HHHHHhccCCCHHHHHHHHH--------------------cCCC--cccEEEeCChHHHHHHHHHhhccchh--------
Confidence 33589999999877652211 2444 67999999996 43211110000000
Q ss_pred hhhccCccccccccCCCCCCCCCEEEEEe-ecc-CCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHH
Q 003987 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMA-RLD-HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIE 628 (781)
Q Consensus 551 ~~~l~~~~~~~~~~g~l~~~~k~iIl~vG-RL~-~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~ 628 (781)
.++.++. +++++++.+ |.. ..||+..+++|+.++.+..++++++++|++.. ...+
T Consensus 189 ---------~~~~~~~----~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~----------~~~~ 245 (365)
T TIGR00236 189 ---------VLSEFGE----DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNP----------VVRE 245 (365)
T ss_pred ---------HHHhcCC----CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCCh----------HHHH
Confidence 0122331 234555544 542 45899999999999877778899998865432 0111
Q ss_pred HHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccC
Q 003987 629 KMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHG 707 (781)
Q Consensus 629 ~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT-~~gG~~EiI~dg 707 (781)
.+.+.++..++|+|+| .+...++..++++ +|+++.+| |..++|||+||+|||++ +.|+..|++.++
T Consensus 246 ---~~~~~~~~~~~v~~~~----~~~~~~~~~~l~~-ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g 312 (365)
T TIGR00236 246 ---PLHKHLGDSKRVHLIE----PLEYLDFLNLAAN-SHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG 312 (365)
T ss_pred ---HHHHHhCCCCCEEEEC----CCChHHHHHHHHh-CCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC
Confidence 2334456667899998 5667788889995 99999987 66789999999999996 778888988766
Q ss_pred CeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 003987 708 ASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGG 746 (781)
Q Consensus 708 ~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a 746 (781)
+|+++ +.|+++++++|.+++ .|++.+++++++.
T Consensus 313 -~~~lv-~~d~~~i~~ai~~ll----~~~~~~~~~~~~~ 345 (365)
T TIGR00236 313 -TNKLV-GTDKENITKAAKRLL----TDPDEYKKMSNAS 345 (365)
T ss_pred -ceEEe-CCCHHHHHHHHHHHH----hChHHHHHhhhcC
Confidence 56666 479999999998877 7999888887654
No 91
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.75 E-value=1.1e-16 Score=176.62 Aligned_cols=258 Identities=14% Similarity=0.123 Sum_probs=170.6
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHh
Q 003987 395 DVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (781)
Q Consensus 395 ~~~~~i~~~~~~kpDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~ 473 (781)
.+.+.+.+ .+||+||+|.... .+.+.++++..|+|++.+.|+... +.... .|.. . .....+
T Consensus 79 ~l~~~l~~---~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s--~~~~~-~~~~----~--------r~~~~~ 140 (363)
T cd03786 79 GLEAVLLE---EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRS--FDRGM-PDEE----N--------RHAIDK 140 (363)
T ss_pred HHHHHHHH---hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEeccccc--CCCCC-CchH----H--------HHHHHH
Confidence 34444444 3899999997543 567888889999998876665321 10000 1110 0 112456
Q ss_pred hCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCC-cCCCCCCCcHHHHHHhhhhcchhh
Q 003987 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMDIYFPYSEKQKRLTALHGSIEQ 552 (781)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGv-D~~~f~p~~~~~~r~~~~~~~i~~ 552 (781)
.+|.++++|+...+.+. ..|++ ..++.+++|++ |...+.+......
T Consensus 141 ~ad~~~~~s~~~~~~l~--------------------~~G~~--~~kI~vign~v~d~~~~~~~~~~~~----------- 187 (363)
T cd03786 141 LSDLHFAPTEEARRNLL--------------------QEGEP--PERIFVVGNTMIDALLRLLELAKKE----------- 187 (363)
T ss_pred HhhhccCCCHHHHHHHH--------------------HcCCC--cccEEEECchHHHHHHHHHHhhccc-----------
Confidence 78999999987755211 12444 77899999985 5322211110000
Q ss_pred hccCccccccccCCCCCCCCCEEEEEeeccC---CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHH
Q 003987 553 LLFDPEQNDEHVGTLSDRSKPIVFSMARLDH---VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEK 629 (781)
Q Consensus 553 ~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~---~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~ 629 (781)
..++.+|+ ++++.++++.||... .||+..+++++.++... ++.+++.|+++. .++
T Consensus 188 ------~~~~~~~~--~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~~~vi~~~~~~~------------~~~ 245 (363)
T cd03786 188 ------LILELLGL--LPKKYILVTLHRVENVDDGEQLEEILEALAELAEE--DVPVVFPNHPRT------------RPR 245 (363)
T ss_pred ------hhhhhccc--CCCCEEEEEeCCccccCChHHHHHHHHHHHHHHhc--CCEEEEECCCCh------------HHH
Confidence 00123454 344557778999875 79999999999988643 466666666543 467
Q ss_pred HHHHHHHcCC-CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccC
Q 003987 630 MHELMKTYKL-DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHG 707 (781)
Q Consensus 630 l~~li~elgL-~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~-gG~~EiI~dg 707 (781)
+++.++++++ .++|+|+| .....++..+++. +|++|.||. | ++.|||+||+|||+++. +...+.+.+
T Consensus 246 l~~~~~~~~~~~~~v~~~~----~~~~~~~~~l~~~-ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~- 314 (363)
T cd03786 246 IREAGLEFLGHHPNVLLIS----PLGYLYFLLLLKN-ADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVES- 314 (363)
T ss_pred HHHHHHhhccCCCCEEEEC----CcCHHHHHHHHHc-CcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhe-
Confidence 7788888876 67899998 4456788888884 999999984 4 47899999999999964 446666644
Q ss_pred CeEEEECCC-CHHHHHHHHHHHHHhccCCHHHHHHH
Q 003987 708 ASGFHIDPY-HPDQAAELMADFFGKCKENPSHWKKI 742 (781)
Q Consensus 708 ~~G~lv~p~-d~~~lA~~I~~~l~~l~~dp~~~~~~ 742 (781)
|..+... |+++++++|.+++ +++..+..|
T Consensus 315 --g~~~~~~~~~~~i~~~i~~ll----~~~~~~~~~ 344 (363)
T cd03786 315 --GTNVLVGTDPEAILAAIEKLL----SDEFAYSLM 344 (363)
T ss_pred --eeEEecCCCHHHHHHHHHHHh----cCchhhhcC
Confidence 4444333 7999999998887 787776665
No 92
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.72 E-value=6.3e-16 Score=186.35 Aligned_cols=320 Identities=13% Similarity=0.116 Sum_probs=211.0
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhh
Q 003987 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (781)
Q Consensus 396 ~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~ 474 (781)
++..+.+..+ .-|+|..|.+...+++..+.++. ..++.+..|..++.. .++ +.+.+...-+..|-.
T Consensus 221 FA~~i~~~~~-~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~----Eif--------r~LP~r~elL~glL~ 287 (934)
T PLN03064 221 FADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSS----EIH--------RTLPSRSELLRSVLA 287 (934)
T ss_pred HHHHHHHhcC-CCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCCh----HHH--------hhCCcHHHHHHHHhc
Confidence 3444444432 34899999999888888887764 578889999765532 211 222222334557889
Q ss_pred CCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC--CceEEecCCCcCCCCCCCc---HHHHHHhhhhcc
Q 003987 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD--PKFNIVSPGADMDIYFPYS---EKQKRLTALHGS 549 (781)
Q Consensus 475 AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~--~k~~VIpnGvD~~~f~p~~---~~~~r~~~~~~~ 549 (781)
||.|=+.|+..+..+.....+.... . ....++.... .++.+.|-|||.+.|.... ....+...+
T Consensus 288 aDlIGFqT~~y~rhFl~~c~rlLg~-----~---~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~l--- 356 (934)
T PLN03064 288 ADLVGFHTYDYARHFVSACTRILGL-----E---GTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKEL--- 356 (934)
T ss_pred CCeEEeCCHHHHHHHHHHHHHHhCc-----c---ccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHH---
Confidence 9999999987766433322211100 0 0011222112 2466789999998875432 111111111
Q ss_pred hhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeE----EEEEeCcCCCCCCcchHHHH
Q 003987 550 IEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVN----LVVVAGYIDVNKSKDREEIA 625 (781)
Q Consensus 550 i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~----LvIVG~g~~~~~~~d~ee~~ 625 (781)
++.+ .++.+|++++|++..||+...+.||.++.+.+|+++ |+-|+-.. .+..+++.+
T Consensus 357 -----------r~~~-----~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~ps---r~~v~eY~~ 417 (934)
T PLN03064 357 -----------KERF-----AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPT---RTDVPEYQK 417 (934)
T ss_pred -----------HHHh-----CCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCC---CCCcHHHHH
Confidence 1122 356799999999999999999999999887777653 44343221 111233444
Q ss_pred HHHHHHHHHHHcC----CCC--cEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCC----cEEEc
Q 003987 626 EIEKMHELMKTYK----LDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL----PTFAT 695 (781)
Q Consensus 626 ~~~~l~~li~elg----L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl----PVVaT 695 (781)
...++.+++.+.+ -.+ -|+++. ..++.+++..+|+ .+|++|.||..|||+++..|||+|+. +.|.|
T Consensus 418 l~~~V~~~V~rIN~~fg~~~w~Pv~~~~---~~l~~eeL~AlY~-~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILS 493 (934)
T PLN03064 418 LTSQVHEIVGRINGRFGTLTAVPIHHLD---RSLDFHALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILS 493 (934)
T ss_pred HHHHHHHHHHHHhhhccCCCcceEEEec---cCCCHHHHHHHHH-hCCEEEeCccccccCchHHHHHHhhcCCCCCeEEe
Confidence 4455555555432 211 144443 3578999999999 59999999999999999999999954 44449
Q ss_pred CccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 696 CHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 696 ~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
.++|.++.+ +..+++|+|.|.+++|++|.+++. .+++.++++.+.+++++ .++|| ..+++.+.+-++
T Consensus 494 EfaGaa~~L--~~~AllVNP~D~~~vA~AI~~AL~---M~~~Er~~r~~~~~~~V-~~~d~--~~Wa~~fl~~L~ 560 (934)
T PLN03064 494 EFAGAAQSL--GAGAILVNPWNITEVAASIAQALN---MPEEEREKRHRHNFMHV-TTHTA--QEWAETFVSELN 560 (934)
T ss_pred CCCchHHHh--CCceEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHhhc-ccCCH--HHHHHHHHHHHH
Confidence 999988888 456999999999999999998883 58999999999999999 66787 445555444443
No 93
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.66 E-value=9.9e-15 Score=168.76 Aligned_cols=170 Identities=10% Similarity=0.167 Sum_probs=145.5
Q ss_pred CCEEEEEe--eccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC---------
Q 003987 572 KPIVFSMA--RLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD--------- 640 (781)
Q Consensus 572 k~iIl~vG--RL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~--------- 640 (781)
+..+++++ || +.|.++.+++++.++.+..|++.|.+.|.+.+ ....+.++++++++++.
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~---------~~~~~~l~~~i~~~~~~~~~~~~~~~ 388 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNND---------NDITQLLEDILEQINEEYNQDKNFFS 388 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCc---------hhHHHHHHHHHHHHHhhhchhhhccc
Confidence 33577788 99 99999999999999999999999999998853 02245677777777666
Q ss_pred --------------------CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccc
Q 003987 641 --------------------GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP 700 (781)
Q Consensus 641 --------------------~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~ 700 (781)
++|.|.|.++ ..++.+.+.. +.++|.+|..|+|+ +.+||+++|+|+| .-|+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~----e~dl~~~~~~-arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~ 459 (519)
T TIGR03713 389 LSEQDENQPILQTDEEQKEKERIAFTTLTN----EEDLISALDK-LRLIIDLSKEPDLY-TQISGISAGIPQI---NKVE 459 (519)
T ss_pred cchhhhhhhcccchhhcccccEEEEEecCC----HHHHHHHHhh-heEEEECCCCCChH-HHHHHHHcCCCee---ecCC
Confidence 7899999544 3478889986 99999999999999 9999999999999 4577
Q ss_pred ccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 701 AEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 701 ~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
.++|.||+||+++ +|.++++++|..+| .++..|++++..+.+.+ ++||- ..+...|++++
T Consensus 460 ~~~V~d~~NG~li--~d~~~l~~al~~~L----~~~~~wn~~~~~sy~~~-~~yS~--~~i~~kW~~~~ 519 (519)
T TIGR03713 460 TDYVEHNKNGYII--DDISELLKALDYYL----DNLKNWNYSLAYSIKLI-DDYSS--ENIIERLNELI 519 (519)
T ss_pred ceeeEcCCCcEEe--CCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HHhhH--HHHHHHHHhhC
Confidence 9999999999999 69999999999888 89999999999999999 78866 56778887753
No 94
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=99.65 E-value=3.3e-14 Score=169.30 Aligned_cols=333 Identities=14% Similarity=0.123 Sum_probs=220.6
Q ss_pred HcCCCceEEEEcCCCchHHHH-----HHHHH----------cCCcEEEEecCCcccC--CCCChhhHh------------
Q 003987 403 ELQGFPDFIIGNYSDGNLVAS-----LLAYK----------MGITQCTIAHALEKTK--YPDSDIYWK------------ 453 (781)
Q Consensus 403 ~~~~kpDIIh~~~~~~~lva~-----llar~----------~gvp~v~t~H~l~~~k--~~~s~~~~k------------ 453 (781)
.+..+||+||+|.+.++++.. ++... .+...|+|.|++.+.. .-..+...+
T Consensus 244 ~lg~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lgl~ 323 (778)
T cd04299 244 ALGIKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELGLS 323 (778)
T ss_pred HhCCCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcCCC
Confidence 345689999999999988776 54321 1467899999976544 111111111
Q ss_pred --hhhccc-cc----hhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecC
Q 003987 454 --KFDEKY-HF----SCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP 526 (781)
Q Consensus 454 --~~~~~y-~f----~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpn 526 (781)
.+.... .+ ..++..-..++..|+.+.++|.-.-.-+++.+.. ++ .|.+....++.-|.|
T Consensus 324 ~~~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~-----------~~---~g~p~~~~~i~~ITN 389 (778)
T cd04299 324 RDRFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAG-----------LW---PGFPVEEVPIGHVTN 389 (778)
T ss_pred HHHHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhh-----------hh---ccCCcccCceeceeC
Confidence 000000 00 0124445678999999999998553222332211 11 133322456888999
Q ss_pred CCcCCCCC-CCcHHHH---------------------------HHhhhhcchhhhccCcc---------------ccccc
Q 003987 527 GADMDIYF-PYSEKQK---------------------------RLTALHGSIEQLLFDPE---------------QNDEH 563 (781)
Q Consensus 527 GvD~~~f~-p~~~~~~---------------------------r~~~~~~~i~~~l~~~~---------------~~~~~ 563 (781)
||+...+. |....-- .+.+.+...++.|.... ..-..
T Consensus 390 GVh~~~W~~P~~~~l~~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~ 469 (778)
T cd04299 390 GVHVPTWVAPEMRELYDRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIGE 469 (778)
T ss_pred CcchhhhcCHHHHHHHHHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhhh
Confidence 99998776 4211110 00001111111110000 00001
Q ss_pred cCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhcc----CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC
Q 003987 564 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL----RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL 639 (781)
Q Consensus 564 ~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~----~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL 639 (781)
.+...+++.++|+++.|+..+|+.+.++..+.++.+. ...++||+.|.+.. .|..-++.++.+.+++++...
T Consensus 470 ~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP----~d~~gK~iIk~i~~~a~~p~~ 545 (778)
T cd04299 470 ADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHP----ADEPGKELIQEIVEFSRRPEF 545 (778)
T ss_pred cCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc----cchHHHHHHHHHHHHHhCcCC
Confidence 2444467888999999999999999999988777541 12599999999865 455557788888888886677
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECC--
Q 003987 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDP-- 715 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p-- 715 (781)
.++|.|+- .. +..+.+.|-..+|++++||+ +|++|++=+=||.-|.+.+++-.|...|.- ++.|||.|.+
T Consensus 546 ~~kVvfle----~Y-d~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~~ 619 (778)
T cd04299 546 RGRIVFLE----DY-DMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDGD 619 (778)
T ss_pred CCcEEEEc----CC-CHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCCc
Confidence 78999985 23 44666666667999999999 999999999999999999999999999987 8899999987
Q ss_pred ----------CCHHHHHHHHHHHHH-hccC-----CHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 716 ----------YHPDQAAELMADFFG-KCKE-----NPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 716 ----------~d~~~lA~~I~~~l~-~l~~-----dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
.|.+++-+.|.+-+. ...+ .|..|.+|.+++++.+...|||++|
T Consensus 620 ~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rm 679 (778)
T cd04299 620 EYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERM 679 (778)
T ss_pred cccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHH
Confidence 455555566643222 2223 3788999999999998899999877
No 95
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.60 E-value=2.8e-15 Score=141.88 Aligned_cols=130 Identities=21% Similarity=0.321 Sum_probs=96.9
Q ss_pred CCEEEEEeeccCCCChHHHHH-HHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003987 572 KPIVFSMARLDHVKNMTGLVE-CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (781)
Q Consensus 572 k~iIl~vGRL~~~Kgl~~Lie-A~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~ 650 (781)
.++|+++|++.+.||++.+++ ++.++.+..|++.|+|+|.+++ +++++ ..++|+|+|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~--------------~l~~~-----~~~~v~~~g--- 59 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD--------------ELKRL-----RRPNVRFHG--- 59 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS---------------HHCCH-----HHCTEEEE----
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH--------------HHHHh-----cCCCEEEcC---
Confidence 357899999999999999999 9999998889999999999765 23333 235899999
Q ss_pred CcCChHHHHHHHHccCcEEEEcCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHH
Q 003987 651 NRARNGELYRYIADTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFF 729 (781)
Q Consensus 651 ~~v~~~el~~~la~aadvfV~PS~-~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l 729 (781)
.+ +++..+++. +|+++.|+. .++++.+++|||++|+|||+++. +..+++.....|.++ ++|+++++++|.+++
T Consensus 60 -~~--~e~~~~l~~-~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 60 -FV--EELPEILAA-ADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp -S---HHHHHHHHC--SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred -CH--HHHHHHHHh-CCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 44 589999995 999999985 68999999999999999999988 677777666778888 889999999998876
No 96
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.55 E-value=3.3e-13 Score=153.46 Aligned_cols=318 Identities=14% Similarity=0.150 Sum_probs=169.5
Q ss_pred CceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCcccCCC---CChhh-------HhhhhccccchhhhhHHHHHHhhC
Q 003987 407 FPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYP---DSDIY-------WKKFDEKYHFSCQFTADLIAMNNA 475 (781)
Q Consensus 407 kpDIIh~~~~~~~lva~llar~-~gvp~v~t~H~l~~~k~~---~s~~~-------~k~~~~~y~f~~~~~~e~~a~~~A 475 (781)
+.-+.|+|.|..+....++.++ ..|..|+|.|+.-..++. ..++| +..-...+....+...|+.+...|
T Consensus 143 ~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~A 222 (633)
T PF05693_consen 143 PKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYA 222 (633)
T ss_dssp EEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHS
T ss_pred CcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhc
Confidence 4457789999876544444333 368889999985433221 11112 112222333444566788889999
Q ss_pred CEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhh---
Q 003987 476 DFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQ--- 552 (781)
Q Consensus 476 D~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~--- 552 (781)
|...|+|+-.+...+..++ ...=.|+|||+|.+.|....+..+....-+..|.+
T Consensus 223 dvFTTVSeITa~Ea~~LL~-----------------------r~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~ 279 (633)
T PF05693_consen 223 DVFTTVSEITAKEAEHLLK-----------------------RKPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVR 279 (633)
T ss_dssp SEEEESSHHHHHHHHHHHS-----------------------S--SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHHH
T ss_pred CeeeehhhhHHHHHHHHhC-----------------------CCCCEEcCCCccccccccchHHHHHHHHHHHHHHHHHH
Confidence 9999999865543222211 22335789999998776654433322222223333
Q ss_pred -hccCccccccccCCCCCCCCCEEEEEeecc-CCCChHHHHHHHHHhhc----cCCCe---EEEEEeCcCCCCCCcchHH
Q 003987 553 -LLFDPEQNDEHVGTLSDRSKPIVFSMARLD-HVKNMTGLVECYGKNSQ----LRELV---NLVVVAGYIDVNKSKDREE 623 (781)
Q Consensus 553 -~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~-~~Kgl~~LieA~~~l~~----~~~~v---~LvIVG~g~~~~~~~d~ee 623 (781)
.++.. +.+ ..++..+|++.||.. +.||++.++||++++.. ...+. -|+|+=... .+.+.|.
T Consensus 280 ~~f~g~------~df-d~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~---~~~~ve~ 349 (633)
T PF05693_consen 280 GHFYGH------YDF-DLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKT---NSFNVES 349 (633)
T ss_dssp HHSTT---------S--GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SE---EEE-HHH
T ss_pred HHhccc------CCC-CccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCcc---CCcCHHH
Confidence 33332 222 123456688899998 69999999999998853 12232 344443221 1111110
Q ss_pred HH----------------------------------------------------------------------HHHHHHHH
Q 003987 624 IA----------------------------------------------------------------------EIEKMHEL 633 (781)
Q Consensus 624 ~~----------------------------------------------------------------------~~~~l~~l 633 (781)
.. ..+.+-..
T Consensus 350 l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~ 429 (633)
T PF05693_consen 350 LKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNM 429 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHH
Confidence 00 01112222
Q ss_pred HHHcCCC----C--cEEEec---cccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccccc
Q 003987 634 MKTYKLD----G--QFRWIA---AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEII 704 (781)
Q Consensus 634 i~elgL~----~--~V~flG---~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI 704 (781)
+.+.+|. + +|.|.+ ...|.+-+-+.+.++.. +|+.|+||+||+||.|.+|+.++|+|+|+|+..|....+
T Consensus 430 irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~G-cdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~ 508 (633)
T PF05693_consen 430 IRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRG-CDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWM 508 (633)
T ss_dssp HHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHH-SSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHH
T ss_pred HHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhcc-CceeeeccccccccCChHHHhhcCCceeeccchhHHHHH
Confidence 3333331 2 245554 12334555677888885 999999999999999999999999999999988877555
Q ss_pred cc-----CCeEEEE---CCCCHHHHHHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 705 EH-----GASGFHI---DPYHPDQAAELMADFFGK-CKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 705 ~d-----g~~G~lv---~p~d~~~lA~~I~~~l~~-l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
.+ ...|+.| .-.+.++.++.|.+++.. |..++..+..+..++.+. .+..+|+..
T Consensus 509 ~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~L-S~~~dW~~~ 571 (633)
T PF05693_consen 509 QEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERL-SDLADWKNF 571 (633)
T ss_dssp HTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHH-GGGGBHHHH
T ss_pred HHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-HHhCCHHHH
Confidence 42 3456655 235677777777665544 345667777777777554 489999875
No 97
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.54 E-value=1.6e-12 Score=137.35 Aligned_cols=372 Identities=13% Similarity=0.115 Sum_probs=230.1
Q ss_pred HHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHH
Q 003987 320 LLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSE 399 (781)
Q Consensus 320 a~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ 399 (781)
|..|++.|++|+ ++....+ ...+.+-..++++|+.+|-.+.....+ +.-.. -+..|.+.+.-.
T Consensus 33 A~Sla~~gf~Vd----liGy~~s--------~p~e~l~~hprI~ih~m~~l~~~~~~p----~~~~l-~lKvf~Qfl~Ll 95 (444)
T KOG2941|consen 33 ALSLAKLGFQVD----LIGYVES--------IPLEELLNHPRIRIHGMPNLPFLQGGP----RVLFL-PLKVFWQFLSLL 95 (444)
T ss_pred HHHHHHcCCeEE----EEEecCC--------CChHHHhcCCceEEEeCCCCcccCCCc----hhhhh-HHHHHHHHHHHH
Confidence 345899999999 7754421 123444445678998887655322111 11111 112222222222
Q ss_pred HHHHcCCCceEEEEcCCCc---hHHHHHHHHHcCCcEEEEecCCccc-CCCCChhhHhhhhccccchhhhhHHHHHHhhC
Q 003987 400 ITAELQGFPDFIIGNYSDG---NLVASLLAYKMGITQCTIAHALEKT-KYPDSDIYWKKFDEKYHFSCQFTADLIAMNNA 475 (781)
Q Consensus 400 i~~~~~~kpDIIh~~~~~~---~lva~llar~~gvp~v~t~H~l~~~-k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~A 475 (781)
+.-...+.||+|....+.+ -.++.+.+...|.+++++.|+..-+ ... ..........+ +-...|...-+.|
T Consensus 96 ~aL~~~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l~---~~~g~~h~lV~--l~~~~E~~fgk~a 170 (444)
T KOG2941|consen 96 WALFVLRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQLK---LKLGFQHPLVR--LVRWLEKYFGKLA 170 (444)
T ss_pred HHHHhccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHHHHH---hhcCCCCchHH--HHHHHHHHhhccc
Confidence 2212256899999888765 5677788888999999999986543 100 00000001111 1113455667789
Q ss_pred CEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEec---C--CCcCCC----CCCCcH----HHHH
Q 003987 476 DFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVS---P--GADMDI----YFPYSE----KQKR 542 (781)
Q Consensus 476 D~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIp---n--GvD~~~----f~p~~~----~~~r 542 (781)
|.-.|+|......+.+.+|- + +..|++ + +.+.+. |.+... ...|
T Consensus 171 ~~nLcVT~AMr~dL~qnWgi-------------------~----ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~ar 227 (444)
T KOG2941|consen 171 DYNLCVTKAMREDLIQNWGI-------------------N----RAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRAR 227 (444)
T ss_pred ccchhhHHHHHHHHHHhcCC-------------------c----eeEEEecCCCCCCCchhHHHHHHhhhccccchhhhc
Confidence 99999998887655555431 1 111211 1 011110 111100 0000
Q ss_pred HhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhc-------cCCCeEEEEEeCcCCC
Q 003987 543 LTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ-------LRELVNLVVVAGYIDV 615 (781)
Q Consensus 543 ~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~-------~~~~v~LvIVG~g~~~ 615 (781)
....+..++..|...+...-... .+....++++.....+..++..|++|+....+ ..|.+-++|.|.||.
T Consensus 228 -~~q~~~~~~taf~~k~~s~~v~~-~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPl- 304 (444)
T KOG2941|consen 228 -EPQDKALERTAFTKKDASGDVQL-LPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPL- 304 (444)
T ss_pred -ccccchhhhhhHhhhcccchhhh-ccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCch-
Confidence 00011222233322222111111 12233457777889999999999999984421 247788889999988
Q ss_pred CCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEE--cCC-CCCCcHHHHHHHHcCCcE
Q 003987 616 NKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQ--PAF-YEAFGLTVVEAMTCGLPT 692 (781)
Q Consensus 616 ~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~--PS~-~E~fGltvlEAMa~GlPV 692 (781)
.+++.+.++++++. +|.+.- .+...++...+++ ++|..|+ .|. -=..|++|+.-..||+||
T Consensus 305 -----------kE~Y~~~I~~~~~~-~v~~~t---pWL~aEDYP~ll~-saDlGVcLHtSSSGLDLPMKVVDMFGcglPv 368 (444)
T KOG2941|consen 305 -----------KEKYSQEIHEKNLQ-HVQVCT---PWLEAEDYPKLLA-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPV 368 (444)
T ss_pred -----------hHHHHHHHHHhccc-ceeeee---cccccccchhHhh-ccccceEeeecCcccCcchhHHHhhcCCCce
Confidence 77888899999885 466654 3677788888888 5986665 443 234799999999999999
Q ss_pred EEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 693 FATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 693 VaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
+|-++....|+|+|++||++++ |.+++|+++..+++..-.+.+..+++.+++++. +.+.|+.+
T Consensus 369 cA~~fkcl~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~--~e~RW~~~ 431 (444)
T KOG2941|consen 369 CAVNFKCLDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLREE--QELRWDES 431 (444)
T ss_pred eeecchhHHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH--HhhhHHHH
Confidence 9999999999999999999997 999999999999966667999999999999887 45677654
No 98
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.53 E-value=1.5e-12 Score=146.17 Aligned_cols=257 Identities=16% Similarity=0.112 Sum_probs=158.7
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHh
Q 003987 395 DVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (781)
Q Consensus 395 ~~~~~i~~~~~~kpDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~ 473 (781)
.+.+.+++ .+||+|++....+ ++.....++.+|+|+++.+ +.+ -+.|.... -+...+
T Consensus 80 ~~~~~l~~---~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i-~P~-------~waw~~~~-----------~r~l~~ 137 (385)
T TIGR00215 80 EVVQLAKQ---AKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYI-SPQ-------VWAWRKWR-----------AKKIEK 137 (385)
T ss_pred HHHHHHHh---cCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEe-CCc-------HhhcCcch-----------HHHHHH
Confidence 34444444 4999999887644 5555668888999988544 111 11222110 224556
Q ss_pred hCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCC-CcHHHHHHhhhhcchhh
Q 003987 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFP-YSEKQKRLTALHGSIEQ 552 (781)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p-~~~~~~r~~~~~~~i~~ 552 (781)
.+|.|+++++.+.+. | . .. ..+..++.|++-.+.... ......
T Consensus 138 ~~d~v~~~~~~e~~~-------~------------~-~~-----g~~~~~vGnPv~~~~~~~~~~~~~~----------- 181 (385)
T TIGR00215 138 ATDFLLAILPFEKAF-------Y------------Q-KK-----NVPCRFVGHPLLDAIPLYKPDRKSA----------- 181 (385)
T ss_pred HHhHhhccCCCcHHH-------H------------H-hc-----CCCEEEECCchhhhccccCCCHHHH-----------
Confidence 899999998766441 1 1 00 235556766663322211 111111
Q ss_pred hccCccccccccCCCCCCCCCEEEEE--eeccC-CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHH
Q 003987 553 LLFDPEQNDEHVGTLSDRSKPIVFSM--ARLDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEK 629 (781)
Q Consensus 553 ~l~~~~~~~~~~g~l~~~~k~iIl~v--GRL~~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~ 629 (781)
++++|+ ++++++|+.+ +|..+ .|++..+++++..+.+..|++++++++.... ..+.
T Consensus 182 --------r~~lgl--~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-----------~~~~ 240 (385)
T TIGR00215 182 --------REKLGI--DHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-----------RRLQ 240 (385)
T ss_pred --------HHHcCC--CCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-----------hHHH
Confidence 134666 5667777665 37776 7899999999999988778898877654422 1345
Q ss_pred HHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-cc----------
Q 003987 630 MHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HG---------- 698 (781)
Q Consensus 630 l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~-~g---------- 698 (781)
+.++.++++...+|.+.+. +...+|+ ++|++|.+| |.+.+|||+||+|+|.+. ..
T Consensus 241 ~~~~~~~~~~~~~v~~~~~--------~~~~~l~-aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~ 306 (385)
T TIGR00215 241 FEQIKAEYGPDLQLHLIDG--------DARKAMF-AADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRL 306 (385)
T ss_pred HHHHHHHhCCCCcEEEECc--------hHHHHHH-hCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHH
Confidence 5666667766667776651 3456787 599999999 888889999999999872 11
Q ss_pred ------ccccccccCCeEE-EE-CCCCHHHHHHHHHHHHHhccCCH----HHHHHHHHHHHH
Q 003987 699 ------GPAEIIEHGASGF-HI-DPYHPDQAAELMADFFGKCKENP----SHWKKISDGGLK 748 (781)
Q Consensus 699 ------G~~EiI~dg~~G~-lv-~p~d~~~lA~~I~~~l~~l~~dp----~~~~~~s~~a~~ 748 (781)
+.+.++.+....- ++ +.-+++.+++.+.+++ .|+ +.++++.+.-.+
T Consensus 307 ~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll----~~~~~~~~~~~~~~~~~~~ 364 (385)
T TIGR00215 307 VKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLL----ENGLKAYKEMHRERQFFEE 364 (385)
T ss_pred HcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHh----cCCcccHHHHHHHHHHHHH
Confidence 1222232221111 11 2346888999998877 888 888777665443
No 99
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.34 E-value=1.3e-10 Score=133.09 Aligned_cols=310 Identities=14% Similarity=0.121 Sum_probs=174.3
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhh
Q 003987 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (781)
Q Consensus 396 ~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~ 474 (781)
++..+.+.. ..-|+|-.|...-.+++..+.++. ..++.+..|..++.. + .++.+.....-+..|-.
T Consensus 131 FA~~i~~~~-~~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~----e--------~fr~lP~r~eiL~glL~ 197 (474)
T PF00982_consen 131 FADAIAEVY-RPGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPSS----E--------IFRCLPWREEILRGLLG 197 (474)
T ss_dssp HHHHHGGG---TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S----H----H--------HHTTSTTHHHHHHHHTT
T ss_pred HHHHHHHhC-cCCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCCH----H--------HHhhCCcHHHHHHHhhc
Confidence 334444432 367899999999877777777664 688889999765532 1 11112222334457889
Q ss_pred CCEEEecCHHHHhhccccccccccccccccccceeeec-cCCCCC--CceEEecCCCcCCCCCCCcH---HHHHHhhhhc
Q 003987 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVH-GIDVFD--PKFNIVSPGADMDIYFPYSE---KQKRLTALHG 548 (781)
Q Consensus 475 AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~-gi~~f~--~k~~VIpnGvD~~~f~p~~~---~~~r~~~~~~ 548 (781)
||.|-..|+..+..+.+...+.-.. -+.... ++.... -++.+.|-|||.+.+..... ...+...+
T Consensus 198 aDlIgFqt~~~~~nFl~~~~r~lg~-------~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l-- 268 (474)
T PF00982_consen 198 ADLIGFQTFEYARNFLSCCKRLLGL-------EVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEEL-- 268 (474)
T ss_dssp SSEEEESSHHHHHHHHHHHHHHS-E-------EEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHH--
T ss_pred CCEEEEecHHHHHHHHHHHHHHcCC-------cccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHH--
Confidence 9999999987766444333222100 000000 121112 25667899999876542211 11111111
Q ss_pred chhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCC----CeEEEEEeCcCCCCCCcchHHH
Q 003987 549 SIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEI 624 (781)
Q Consensus 549 ~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee~ 624 (781)
++.++ .+..+|+.+.|++..||+..=+.||.++.+.+| .+.|+-++.... +...+++
T Consensus 269 ------------~~~~~----~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr---~~~~~y~ 329 (474)
T PF00982_consen 269 ------------REKFK----GKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSR---EDVPEYQ 329 (474)
T ss_dssp ------------HHHTT----T-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-S---TTSHHHH
T ss_pred ------------HHhcC----CCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccC---ccchhHH
Confidence 11121 224799999999999999999999999876655 577887776432 3444555
Q ss_pred HHHHHHHHHHHH----cCCCC--cEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCc----EEE
Q 003987 625 AEIEKMHELMKT----YKLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFA 694 (781)
Q Consensus 625 ~~~~~l~~li~e----lgL~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP----VVa 694 (781)
+..+++.+++.+ +|-.+ -|.++- ..++.++++.+++. +|+++.+|..+|..++..|+.+|-.+ +|.
T Consensus 330 ~~~~~v~~~v~~IN~~~g~~~~~PI~~~~---~~~~~~~~~aly~~-aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiL 405 (474)
T PF00982_consen 330 ELRREVEELVGRINGKYGTPDWTPIIYIY---RSLSFEELLALYRA-ADVALVTSLRDGMNLVAKEYVACQDDNPGVLIL 405 (474)
T ss_dssp HHHHHHHHHHHHHHHHH-BTTB-SEEEE----S---HHHHHHHHHH--SEEEE--SSBS--HHHHHHHHHS-TS--EEEE
T ss_pred HHHHHHHHHHHHHHhhcccCCceeEEEEe---cCCCHHHHHHHHHh-hhhEEecchhhccCCcceEEEEEecCCCCceEe
Confidence 666666666654 34322 255554 36789999999994 99999999999999999999999765 777
Q ss_pred cCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCc
Q 003987 695 TCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVV 756 (781)
Q Consensus 695 T~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw 756 (781)
|...|.++.+.+ ..++|+|.|.+++|++|.+.++ .+++.++...+..++.+ ..+|-
T Consensus 406 SefaGaa~~L~~--~al~VNP~d~~~~A~ai~~AL~---M~~~Er~~r~~~~~~~v-~~~~~ 461 (474)
T PF00982_consen 406 SEFAGAAEQLSE--AALLVNPWDIEEVADAIHEALT---MPPEERKERHARLREYV-REHDV 461 (474)
T ss_dssp ETTBGGGGT-TT--S-EEE-TT-HHHHHHHHHHHHT-----HHHHHHHHHHHHHHH-HHT-H
T ss_pred eccCCHHHHcCC--ccEEECCCChHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-HhCCH
Confidence 888888888743 3599999999999999998884 56777777777777777 44443
No 100
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.34 E-value=2.1e-10 Score=130.04 Aligned_cols=322 Identities=12% Similarity=0.055 Sum_probs=210.2
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhh
Q 003987 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (781)
Q Consensus 396 ~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~-~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~ 474 (781)
++..+.+... .-|+|-.|.....+++..+.++ ...++.+..|..++. ++++.. +..-..-...|-.
T Consensus 113 FA~~v~~~~~-~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFPs----~eifr~--------LP~r~eil~glL~ 179 (474)
T PRK10117 113 LADKLLPLLK-DDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPT----PEIFNA--------LPPHDELLEQLCD 179 (474)
T ss_pred HHHHHHHhcC-CCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCCC----hHHHhh--------CCChHHHHHHHHh
Confidence 3344444332 3489999999987777777665 357888899976553 222211 1111233457888
Q ss_pred CCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHH--HHHHhhhhcchhh
Q 003987 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK--QKRLTALHGSIEQ 552 (781)
Q Consensus 475 AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~--~~r~~~~~~~i~~ 552 (781)
+|.|=.-|+..+..+.+.+.+..... ...+......|- .-++.+.|-|||.+.|...... ..+...
T Consensus 180 aDlIGFqt~~y~rnFl~~~~~~lg~~--~~~~~~v~~~gr---~v~v~~~PigID~~~~~~~a~~~~~~~~~~------- 247 (474)
T PRK10117 180 YDLLGFQTENDRLAFLDCLSNLTRVT--TRSGKSHTAWGK---AFRTEVYPIGIEPDEIAKQAAGPLPPKLAQ------- 247 (474)
T ss_pred CccceeCCHHHHHHHHHHHHHHcCCc--ccCCCeEEECCe---EEEEEEEECeEcHHHHHHHhhchHHHHHHH-------
Confidence 99999999877664444332211000 001000000110 2357778999998776432111 111111
Q ss_pred hccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCC----CeEEEEEeCcCCCCCCcchHHHHHHH
Q 003987 553 LLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEIAEIE 628 (781)
Q Consensus 553 ~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee~~~~~ 628 (781)
.++.+ .++.+|+.+.|+|..||+..=++||+++.+.+| ++.|+-++.. ..+.-+++++...
T Consensus 248 -------lr~~~-----~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~p---sR~~v~~Y~~l~~ 312 (474)
T PRK10117 248 -------LKAEL-----KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT---SRGDVQAYQDIRH 312 (474)
T ss_pred -------HHHHc-----CCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCC---CCCccHHHHHHHH
Confidence 11122 356799999999999999999999999887665 5678877632 3344455566666
Q ss_pred HHHHHHHHc----CCCCc--EEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCC-----cEEEcCc
Q 003987 629 KMHELMKTY----KLDGQ--FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-----PTFATCH 697 (781)
Q Consensus 629 ~l~~li~el----gL~~~--V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl-----PVVaT~~ 697 (781)
++.+++.+. |-.+. |+++- ..++.+++..+|+ +||+++.++..+|+.|+..|+.+|-. +.|.|..
T Consensus 313 ~v~~~vg~INg~fg~~~w~Pv~y~~---~~~~~~~l~alyr-~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSef 388 (474)
T PRK10117 313 QLETEAGRINGKYGQLGWTPLYYLN---QHFDRKLLMKIFR-YSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQF 388 (474)
T ss_pred HHHHHHHHHHhccCCCCceeEEEec---CCCCHHHHHHHHH-hccEEEecccccccccccchheeeecCCCCccEEEecc
Confidence 777776653 22221 34433 4678999999999 59999999999999999999999965 3788998
Q ss_pred cccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 698 GGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 698 gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
.|.++.+. ..++|+|.|.+++|++|.+.++ .+++.+++..+..++.+ .++|. ..+++.+-.-+.
T Consensus 389 AGaA~~L~---~AllVNP~d~~~~A~Ai~~AL~---Mp~~Er~~R~~~l~~~v-~~~dv--~~W~~~fL~~L~ 452 (474)
T PRK10117 389 AGAANELT---SALIVNPYDRDEVAAALDRALT---MPLAERISRHAEMLDVI-VKNDI--NHWQECFISDLK 452 (474)
T ss_pred cchHHHhC---CCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-hhCCH--HHHHHHHHHHHH
Confidence 89888883 4899999999999999998885 66777777777777777 44433 445555544444
No 101
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.26 E-value=2.7e-11 Score=118.13 Aligned_cols=166 Identities=16% Similarity=0.136 Sum_probs=86.1
Q ss_pred CCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccc
Q 003987 299 PDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQ 378 (781)
Q Consensus 299 p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~ 378 (781)
+..||.++++. +|+++|+++||+|+ |+|....+..... ............
T Consensus 9 ~~~GG~e~~~~--------~l~~~l~~~G~~v~----v~~~~~~~~~~~~------------~~~~~~~~~~~~------ 58 (177)
T PF13439_consen 9 PNIGGAERVVL--------NLARALAKRGHEVT----VVSPGVKDPIEEE------------LVKIFVKIPYPI------ 58 (177)
T ss_dssp TSSSHHHHHHH--------HHHHHHHHTT-EEE----EEESS-TTS-SST------------EEEE---TT-SS------
T ss_pred CCCChHHHHHH--------HHHHHHHHCCCEEE----EEEcCCCccchhh------------ccceeeeeeccc------
Confidence 45899999999 77788899999999 9977754432111 011111111100
Q ss_pred cccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccc--CCCCChhhHhhhh
Q 003987 379 WISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKT--KYPDSDIYWKKFD 456 (781)
Q Consensus 379 ~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~--k~~~s~~~~k~~~ 456 (781)
.....+.......+.+.+.+. +|||||+|.+.....+....+ ++|.|.+.|+.... ...........+.
T Consensus 59 ----~~~~~~~~~~~~~~~~~i~~~---~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~~~~~~~~~~~~~~~ 129 (177)
T PF13439_consen 59 ----RKRFLRSFFFMRRLRRLIKKE---KPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFERRFLKSKLSPYSYLN 129 (177)
T ss_dssp ----TSS--HHHHHHHHHHHHHHHH---T-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--HHTTTTSCCCHHHHH
T ss_pred ----ccccchhHHHHHHHHHHHHHc---CCCeEEecccchhHHHHHhcc--CCCEEEEeCCCcccccccccccchhhhhh
Confidence 001111112333445555554 899999998766444444444 99999999986521 1000000000000
Q ss_pred ccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCC
Q 003987 457 EKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIY 533 (781)
Q Consensus 457 ~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f 533 (781)
. .......+.+|.+|++|...++.+.+ .|++ ..|+.|||||+|.+.|
T Consensus 130 -------~-~~~~~~~~~~~~ii~vS~~~~~~l~~--------------------~~~~--~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 130 -------F-RIERKLYKKADRIIAVSESTKDELIK--------------------FGIP--PEKIHVIYNGIDTDRF 176 (177)
T ss_dssp -------H-CTTHHHHCCSSEEEESSHHHHHHHHH--------------------HT----SS-EEE----B-CCCH
T ss_pred -------h-hhhhhHHhcCCEEEEECHHHHHHHHH--------------------hCCc--ccCCEEEECCccHHHc
Confidence 0 11223478999999999988663222 2443 6899999999999876
No 102
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.25 E-value=3.2e-11 Score=107.23 Aligned_cols=86 Identities=24% Similarity=0.440 Sum_probs=80.4
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 003987 668 AFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGL 747 (781)
Q Consensus 668 vfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~ 747 (781)
+++.|+..++++..++|+||||+|||+++.++..+++.+|..++.++ |+++++++|..++ +||+.+++++++|+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll----~~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLL----ENPEERRRIAKNAR 74 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHH----CCHHHHHHHHHHHH
Confidence 46778888999999999999999999999999999999999999998 9999999998877 89999999999999
Q ss_pred HHHHHhcCcchh
Q 003987 748 KRIYERLVVSSD 759 (781)
Q Consensus 748 ~~~~~~ysw~~~ 759 (781)
+++.++|||+..
T Consensus 75 ~~v~~~~t~~~~ 86 (92)
T PF13524_consen 75 ERVLKRHTWEHR 86 (92)
T ss_pred HHHHHhCCHHHH
Confidence 999999999764
No 103
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.24 E-value=1.4e-11 Score=118.14 Aligned_cols=160 Identities=19% Similarity=0.272 Sum_probs=85.1
Q ss_pred ccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCccccccccc
Q 003987 302 GGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWIS 381 (781)
Q Consensus 302 GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~is 381 (781)
||.+.|+. +|+++|.++||+|+ |+|...++.. .... ..++.+.++|........
T Consensus 1 GG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~~~----- 54 (160)
T PF13579_consen 1 GGIERYVR--------ELARALAARGHEVT----VVTPQPDPED------DEEE---EDGVRVHRLPLPRRPWPL----- 54 (160)
T ss_dssp SHHHHHHH--------HHHHHHHHTT-EEE----EEEE---GGG-------SEE---ETTEEEEEE--S-SSSGG-----
T ss_pred CCHHHHHH--------HHHHHHHHCCCEEE----EEecCCCCcc------cccc---cCCceEEeccCCccchhh-----
Confidence 79999999 77788899999999 9987644321 1111 236888898877642100
Q ss_pred ccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccc
Q 003987 382 RFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHF 461 (781)
Q Consensus 382 r~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f 461 (781)
..+. +...+.+.+ .....+||+||+|++..++++.++++..++|+|++.|+...... . .|. ...+
T Consensus 55 --~~~~----~~~~~~~~l-~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~--~--~~~--~~~~-- 119 (160)
T PF13579_consen 55 --RLLR----FLRRLRRLL-AARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRRG--S--RWK--RRLY-- 119 (160)
T ss_dssp --GHCC----HHHHHHHHC-HHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------HH--HHHH--
T ss_pred --hhHH----HHHHHHHHH-hhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhhc--c--chh--hHHH--
Confidence 0111 112222223 22356999999999766777777776889999999997542211 1 111 1111
Q ss_pred hhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCC
Q 003987 462 SCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG 527 (781)
Q Consensus 462 ~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnG 527 (781)
...+...++.||.++++|+...+.+.+ .|++ .+|+.|||||
T Consensus 120 ---~~~~~~~~~~ad~vi~~S~~~~~~l~~--------------------~g~~--~~ri~vipnG 160 (160)
T PF13579_consen 120 ---RWLERRLLRRADRVIVVSEAMRRYLRR--------------------YGVP--PDRIHVIPNG 160 (160)
T ss_dssp ---HHHHHHHHHH-SEEEESSHHHHHHHHH--------------------H-----GGGEEE----
T ss_pred ---HHHHHHHHhcCCEEEECCHHHHHHHHH--------------------hCCC--CCcEEEeCcC
Confidence 123567899999999999988663221 2443 7899999998
No 104
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.23 E-value=8.4e-09 Score=114.58 Aligned_cols=301 Identities=16% Similarity=0.113 Sum_probs=162.9
Q ss_pred cccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccc
Q 003987 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWI 380 (781)
Q Consensus 301 ~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~i 380 (781)
|||-..-.+ .+++.|.++||+|. ++++...-.. .+ ++. .+..+..++....
T Consensus 11 TGGHi~Pal--------a~a~~l~~~g~~v~----~vg~~~~~e~------~l--~~~-~g~~~~~~~~~~l-------- 61 (352)
T PRK12446 11 SAGHVTPNL--------AIIPYLKEDNWDIS----YIGSHQGIEK------TI--IEK-ENIPYYSISSGKL-------- 61 (352)
T ss_pred cHHHHHHHH--------HHHHHHHhCCCEEE----EEECCCcccc------cc--Ccc-cCCcEEEEeccCc--------
Confidence 777655555 77788888999998 8875532210 11 111 1344444443221
Q ss_pred cccCch---hhHHHHH---HHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhh
Q 003987 381 SRFDVW---PYLETFT---EDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKK 454 (781)
Q Consensus 381 sr~~i~---~yl~~f~---~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~ 454 (781)
++...+ .....+. ..+.+.++ ..+||+||++....+..+.++++.+++|+++.-.+..+ .
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~------g----- 127 (352)
T PRK12446 62 RRYFDLKNIKDPFLVMKGVMDAYVRIR---KLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTP------G----- 127 (352)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHH---hcCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCc------c-----
Confidence 111011 1111111 12223333 34999999987777777889999999998653222110 0
Q ss_pred hhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCC
Q 003987 455 FDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYF 534 (781)
Q Consensus 455 ~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~ 534 (781)
.+.++....||.|.++-+.... +++ ..|+.++-|.+..+...
T Consensus 128 -----------~~nr~~~~~a~~v~~~f~~~~~-------------------------~~~--~~k~~~tG~Pvr~~~~~ 169 (352)
T PRK12446 128 -----------LANKIALRFASKIFVTFEEAAK-------------------------HLP--KEKVIYTGSPVREEVLK 169 (352)
T ss_pred -----------HHHHHHHHhhCEEEEEccchhh-------------------------hCC--CCCeEEECCcCCccccc
Confidence 1223566778888665432111 111 35667776666554432
Q ss_pred CCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEe-eccCCCChHHH-HHHHHHhhccCCCeEEEEEeCc
Q 003987 535 PYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMA-RLDHVKNMTGL-VECYGKNSQLRELVNLVVVAGY 612 (781)
Q Consensus 535 p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vG-RL~~~Kgl~~L-ieA~~~l~~~~~~v~LvIVG~g 612 (781)
+..... +..+|+ ++++++|+.+| ... .+.+..+ .+++..+. .+++++++.+.
T Consensus 170 ~~~~~~--------------------~~~~~l--~~~~~~iLv~GGS~G-a~~in~~~~~~l~~l~---~~~~vv~~~G~ 223 (352)
T PRK12446 170 GNREKG--------------------LAFLGF--SRKKPVITIMGGSLG-AKKINETVREALPELL---LKYQIVHLCGK 223 (352)
T ss_pred ccchHH--------------------HHhcCC--CCCCcEEEEECCccc-hHHHHHHHHHHHHhhc---cCcEEEEEeCC
Confidence 221111 123554 45667766664 444 3445333 33444443 24777665543
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcE
Q 003987 613 IDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPT 692 (781)
Q Consensus 613 ~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPV 692 (781)
.+ .++ ....+ .++...++. .+++..+|+ .+|++|.=+ =+.|+.|++++|+|.
T Consensus 224 ~~------------~~~---~~~~~---~~~~~~~f~-----~~~m~~~~~-~adlvIsr~----G~~t~~E~~~~g~P~ 275 (352)
T PRK12446 224 GN------------LDD---SLQNK---EGYRQFEYV-----HGELPDILA-ITDFVISRA----GSNAIFEFLTLQKPM 275 (352)
T ss_pred ch------------HHH---HHhhc---CCcEEecch-----hhhHHHHHH-hCCEEEECC----ChhHHHHHHHcCCCE
Confidence 22 111 11111 133444532 235778888 499888864 378999999999999
Q ss_pred EEcCcc---------ccccccccCCeEEEECCC--CHHHHHHHHHHHHHhccCCHHHHH
Q 003987 693 FATCHG---------GPAEIIEHGASGFHIDPY--HPDQAAELMADFFGKCKENPSHWK 740 (781)
Q Consensus 693 VaT~~g---------G~~EiI~dg~~G~lv~p~--d~~~lA~~I~~~l~~l~~dp~~~~ 740 (781)
|..... ..++.+.+...|..+... +++.+++.+.+++ .|++.++
T Consensus 276 I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll----~~~~~~~ 330 (352)
T PRK12446 276 LLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELS----HNNEKYK 330 (352)
T ss_pred EEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHH----cCHHHHH
Confidence 987432 123344455566666432 5678888887766 7876543
No 105
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.22 E-value=1.6e-08 Score=112.10 Aligned_cols=311 Identities=15% Similarity=0.157 Sum_probs=182.7
Q ss_pred cccceeehHHHHHHHHHHHHHHHHHCCCc-eeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCccccccc
Q 003987 301 TGGQVVYILDQVRALENEMLLRIKRQGLD-ISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQW 379 (781)
Q Consensus 301 ~GG~~vyvld~araL~~eLa~~L~~~Ghe-V~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~ 379 (781)
|||-.--.+ .+++.|.++|++ |. ++..... ..+......+..+..++.....
T Consensus 10 TGGHv~pAl--------Al~~~l~~~g~~~v~----~~~~~~~---------~e~~l~~~~~~~~~~I~~~~~~------ 62 (357)
T COG0707 10 TGGHVFPAL--------ALAEELAKRGWEQVI----VLGTGDG---------LEAFLVKQYGIEFELIPSGGLR------ 62 (357)
T ss_pred CccchhHHH--------HHHHHHHhhCccEEE----Eeccccc---------ceeeeccccCceEEEEeccccc------
Confidence 566555545 678889999997 43 4422211 1111111224666666655421
Q ss_pred ccccCchh------hHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHh
Q 003987 380 ISRFDVWP------YLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWK 453 (781)
Q Consensus 380 isr~~i~~------yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k 453 (781)
+...+. ++......+.+.+++ .+||+|++........+.++++.+|+|+++.-.+... ...|+
T Consensus 63 --~~~~~~~~~~~~~~~~~~~~a~~il~~---~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~------G~ank 131 (357)
T COG0707 63 --RKGSLKLLKAPFKLLKGVLQARKILKK---LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVP------GLANK 131 (357)
T ss_pred --ccCcHHHHHHHHHHHHHHHHHHHHHHH---cCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCc------chhHH
Confidence 112222 111222333444444 3999999988888888889999999999876544322 12333
Q ss_pred hhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCC
Q 003987 454 KFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIY 533 (781)
Q Consensus 454 ~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f 533 (781)
+..+.|+.|.+.-... . .+.+ +.++.++-|.+..+..
T Consensus 132 ----------------~~~~~a~~V~~~f~~~-~------------------------~~~~--~~~~~~tG~Pvr~~~~ 168 (357)
T COG0707 132 ----------------ILSKFAKKVASAFPKL-E------------------------AGVK--PENVVVTGIPVRPEFE 168 (357)
T ss_pred ----------------HhHHhhceeeeccccc-c------------------------ccCC--CCceEEecCcccHHhh
Confidence 2344566554433211 0 0122 4567788887776655
Q ss_pred CCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEe-eccCCCChHHHHH-HHHHhhccCCCeEEEEEeC
Q 003987 534 FPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMA-RLDHVKNMTGLVE-CYGKNSQLRELVNLVVVAG 611 (781)
Q Consensus 534 ~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vG-RL~~~Kgl~~Lie-A~~~l~~~~~~v~LvIVG~ 611 (781)
. .+....+. .+ ..++++|+.+| ..+..+ +..++. +...+.+ +++++..++
T Consensus 169 ~-~~~~~~~~--------------------~~---~~~~~~ilV~GGS~Ga~~-ln~~v~~~~~~l~~---~~~v~~~~G 220 (357)
T COG0707 169 E-LPAAEVRK--------------------DG---RLDKKTILVTGGSQGAKA-LNDLVPEALAKLAN---RIQVIHQTG 220 (357)
T ss_pred c-cchhhhhh--------------------hc---cCCCcEEEEECCcchhHH-HHHHHHHHHHHhhh---CeEEEEEcC
Confidence 4 22222111 11 12566666655 444444 444443 3334432 577766665
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCc
Q 003987 612 YIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP 691 (781)
Q Consensus 612 g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP 691 (781)
... .++++..-.+++. ++..++.. ++..+|+. +|+.|.=+ =++|+-|..++|+|
T Consensus 221 ~~~------------~~~~~~~~~~~~~---~~v~~f~~------dm~~~~~~-ADLvIsRa----Ga~Ti~E~~a~g~P 274 (357)
T COG0707 221 KND------------LEELKSAYNELGV---VRVLPFID------DMAALLAA-ADLVISRA----GALTIAELLALGVP 274 (357)
T ss_pred cch------------HHHHHHHHhhcCc---EEEeeHHh------hHHHHHHh-ccEEEeCC----cccHHHHHHHhCCC
Confidence 432 3445555555544 77777544 47888884 99998865 37999999999999
Q ss_pred EEEcCccc--------cccccccCCeEEEECCCC--HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 003987 692 TFATCHGG--------PAEIIEHGASGFHIDPYH--PDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (781)
Q Consensus 692 VVaT~~gG--------~~EiI~dg~~G~lv~p~d--~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~ 750 (781)
+|--..+. .+..+++...|..++-.+ ++.+++.|.+++ .+|+..++|++++++..
T Consensus 275 ~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~----~~~~~l~~m~~~a~~~~ 339 (357)
T COG0707 275 AILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLL----SNPEKLKAMAENAKKLG 339 (357)
T ss_pred EEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHh----cCHHHHHHHHHHHHhcC
Confidence 99875433 334455666777776444 778888888777 88999999999987765
No 106
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.22 E-value=1.9e-09 Score=131.26 Aligned_cols=311 Identities=13% Similarity=0.113 Sum_probs=203.1
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHh
Q 003987 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (781)
Q Consensus 395 ~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~ 473 (781)
.++..+.+.....-|+|..|.+...+++..+.++. ..++.+..|..++.. .+ |+-+.....-+..|-
T Consensus 189 ~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~----ei--------fr~LP~r~eiL~glL 256 (854)
T PLN02205 189 IFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS----EI--------YKTLPIREELLRALL 256 (854)
T ss_pred HHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCCh----HH--------HhhCCcHHHHHHHHh
Confidence 34444444432123899999999888877776664 578889999765532 22 222222233456788
Q ss_pred hCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC--ceEEecCCCcCCCCCCC---cHHHHHHhhhhc
Q 003987 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMDIYFPY---SEKQKRLTALHG 548 (781)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~--k~~VIpnGvD~~~f~p~---~~~~~r~~~~~~ 548 (781)
.||.|=..|+..+..+.....+...... ...+ ...|+.+... ++.+.|-|||...|... ++...+...+
T Consensus 257 ~aDlIGFht~~yar~Fl~~~~r~lgl~~-~~~~---g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l-- 330 (854)
T PLN02205 257 NSDLIGFHTFDYARHFLSCCSRMLGLSY-ESKR---GYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKEL-- 330 (854)
T ss_pred cCCeEEecCHHHHHHHHHHHHHHhCCcc-cCCC---cceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHH--
Confidence 9999999998877654443322110000 0000 0012222223 56678999998776432 1111222111
Q ss_pred chhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHHH
Q 003987 549 SIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEI 624 (781)
Q Consensus 549 ~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~ 624 (781)
+++++ .+++.+|+.+.|+|..||+..=+.||.++.+.+|. +.|+-+.--. .+..++++
T Consensus 331 ------------~~~~~---~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~ps---r~~~~~y~ 392 (854)
T PLN02205 331 ------------IKQFC---DQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPA---RGKGKDVK 392 (854)
T ss_pred ------------HHHhc---cCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCC---CcccHHHH
Confidence 12222 23578999999999999999999999999877775 4677665432 23344555
Q ss_pred HHHHHHHHHHHHc----CCCC--cEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCC--------
Q 003987 625 AEIEKMHELMKTY----KLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-------- 690 (781)
Q Consensus 625 ~~~~~l~~li~el----gL~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl-------- 690 (781)
+...++.+++.+. |-.+ -|+++- ..++.+++..+|+ .||+++.++..+|+.|+..|+.+|..
T Consensus 393 ~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~---~~~~~~e~~aly~-~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~ 468 (854)
T PLN02205 393 EVQAETHSTVKRINETFGKPGYDPIVLID---APLKFYERVAYYV-VAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKL 468 (854)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCceEEEEe---cCCCHHHHHHHHH-hccEEEeccccccccccchheeEEccCccccccc
Confidence 6666666666553 3222 255554 3678999999999 59999999999999999999999854
Q ss_pred -----------cEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 003987 691 -----------PTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 751 (781)
Q Consensus 691 -----------PVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~ 751 (781)
..|.|...|.+..+. ..++|+|.|.+++|++|.+.+. .+++.++..-+..++++.
T Consensus 469 ~~~~~~~~~~gvLiLSEfaGaa~~L~---~Ai~VNP~d~~~~a~ai~~AL~---m~~~Er~~R~~~~~~~v~ 534 (854)
T PLN02205 469 LGLEPSTPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIDAVADAMDSALE---MAEPEKQLRHEKHYRYVS 534 (854)
T ss_pred cccccccCCCCceEeeeccchhHHhC---cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHh
Confidence 367788878777762 3799999999999999998884 566666665666666663
No 107
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.19 E-value=5.1e-09 Score=118.50 Aligned_cols=303 Identities=15% Similarity=0.107 Sum_probs=195.6
Q ss_pred CceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHH
Q 003987 407 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (781)
Q Consensus 407 kpDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (781)
.-|+|..|...-.+++..+..+. ..++.+..|..++.. .++ +-+.+...-...+-.||+|-..++..
T Consensus 147 ~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPss----Evf--------r~lP~r~eIl~gll~~dligFqt~~y 214 (486)
T COG0380 147 PGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSS----EVF--------RCLPWREEILEGLLGADLIGFQTESY 214 (486)
T ss_pred CCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCCH----HHH--------hhCchHHHHHHHhhcCCeeEecCHHH
Confidence 34999999999877777777665 467788899766543 211 11112223345677899999999877
Q ss_pred Hhhccccccccccccccccccceeeecc-CCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccccc
Q 003987 486 IAGTKNTVGQYESHTAFTLPGLYRVVHG-IDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (781)
Q Consensus 486 ~~~~k~~v~qyes~~~f~l~~ly~v~~g-i~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~ 564 (781)
+..+.+...+.... + +.-.+..+ .+-...++..+|=|+|...|........... .+.++ ++.+
T Consensus 215 ~~nF~~~~~r~~~~---~--~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~----~~~el-------~~~~ 278 (486)
T COG0380 215 ARNFLDLCSRLLGV---T--GDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQE----KVLEL-------KAEL 278 (486)
T ss_pred HHHHHHHHHHhccc---c--ccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhh----HHHHH-------HHHh
Confidence 66544443332100 0 00001111 1101235666899999876543221110000 00010 1111
Q ss_pred CCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCC----CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC-C
Q 003987 565 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK-L 639 (781)
Q Consensus 565 g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elg-L 639 (781)
..++.+|+.+.|+|..||+..=+.||.++...+| .+.|+-++.... ..-++++....++.+++.+.+ .
T Consensus 279 ----~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr---~~v~~y~~~~~~i~~~V~rIN~~ 351 (486)
T COG0380 279 ----GRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSR---EDVEEYQALRLQIEELVGRINGE 351 (486)
T ss_pred ----cCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCc---cccHHHHHHHHHHHHHHHHHHhh
Confidence 2348899999999999999999999999987665 567777776544 222333344555555554432 2
Q ss_pred CCcEEEec--cccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcC----CcEEEcCccccccccccCCeEEEE
Q 003987 640 DGQFRWIA--AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCG----LPTFATCHGGPAEIIEHGASGFHI 713 (781)
Q Consensus 640 ~~~V~flG--~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~G----lPVVaT~~gG~~EiI~dg~~G~lv 713 (781)
-+.+.|.. +....++..+++.++. .+|+++..++.+|+.++..|+.+|- =|.|.|...|.+..+.+ .+++
T Consensus 352 fG~~~~~Pv~~l~~~~~~~~l~al~~-~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~---AliV 427 (486)
T COG0380 352 FGSLSWTPVHYLHRDLDRNELLALYR-AADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASELRD---ALIV 427 (486)
T ss_pred cCCCCcceeEEEeccCCHHHHHHHHh-hhceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhhcc---CEeE
Confidence 23333322 1123578899999999 5999999999999999999999984 47888888888887743 7999
Q ss_pred CCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 003987 714 DPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 751 (781)
Q Consensus 714 ~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~ 751 (781)
+|.|.+++|++|.+.+. .+++.+++.-+..++.+.
T Consensus 428 NP~d~~~va~ai~~AL~---m~~eEr~~r~~~~~~~v~ 462 (486)
T COG0380 428 NPWDTKEVADAIKRALT---MSLEERKERHEKLLKQVL 462 (486)
T ss_pred CCCChHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHH
Confidence 99999999999998885 677777776666777663
No 108
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=99.03 E-value=7.9e-09 Score=117.46 Aligned_cols=135 Identities=13% Similarity=0.133 Sum_probs=107.4
Q ss_pred HHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCc
Q 003987 588 TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKG 667 (781)
Q Consensus 588 ~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aad 667 (781)
+..+++++++.+..|+++|.| |.+.+ ...+|.++ +++ ++.+.+.|..+ ..+-.++. .||
T Consensus 291 s~~I~~i~~Lv~~lPd~~f~I-ga~te-----------~s~kL~~L-~~y--~nvvly~~~~~-----~~l~~ly~-~~d 349 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYHFHI-AALTE-----------MSSKLMSL-DKY--DNVKLYPNITT-----QKIQELYQ-TCD 349 (438)
T ss_pred HHHHHHHHHHHHhCCCcEEEE-EecCc-----------ccHHHHHH-Hhc--CCcEEECCcCh-----HHHHHHHH-hcc
Confidence 999999999999999999999 65543 13577787 777 55566666433 34566666 499
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEcC-ccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 003987 668 AFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGG 746 (781)
Q Consensus 668 vfV~PS~~E~fGltvlEAMa~GlPVVaT~-~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a 746 (781)
+++-.|..|+|++++.|||+.|+|||+.+ .-|+.+++.+ |.+++.+|+++++++|.+++ .||+.+++.-..=
T Consensus 350 lyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL----~d~~~~~~~~~~q 422 (438)
T TIGR02919 350 IYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLL----NDPNQFRELLEQQ 422 (438)
T ss_pred EEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHh----cCHHHHHHHHHHH
Confidence 99999999999999999999999999985 4467788865 88999999999999999888 8998776654444
Q ss_pred HHHH
Q 003987 747 LKRI 750 (781)
Q Consensus 747 ~~~~ 750 (781)
++.+
T Consensus 423 ~~~a 426 (438)
T TIGR02919 423 REHA 426 (438)
T ss_pred HHHh
Confidence 4443
No 109
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=98.96 E-value=1.8e-08 Score=101.20 Aligned_cols=182 Identities=18% Similarity=0.146 Sum_probs=116.6
Q ss_pred ceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeec
Q 003987 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVS 357 (781)
Q Consensus 278 ~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~ 357 (781)
|.||+|+...|.|. ..||.|+.+. +|+.+|+++||+|+ |.|+...... . ..
T Consensus 1 mkkIaIiGtrGIPa--------~YGGfET~ve--------~L~~~l~~~g~~v~----Vyc~~~~~~~------~---~~ 51 (185)
T PF09314_consen 1 MKKIAIIGTRGIPA--------RYGGFETFVE--------ELAPRLVSKGIDVT----VYCRSDYYPY------K---EF 51 (185)
T ss_pred CceEEEEeCCCCCc--------ccCcHHHHHH--------HHHHHHhcCCceEE----EEEccCCCCC------C---Cc
Confidence 35899999999985 4699999999 88999999999999 9998732211 1 12
Q ss_pred CCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCC-chHHHHHHHHH--cCCcEE
Q 003987 358 GTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSD-GNLVASLLAYK--MGITQC 434 (781)
Q Consensus 358 ~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~-~~lva~llar~--~gvp~v 434 (781)
...++++..+|.....+ .....|--.-...+...... -..+.|||+.+... ++++..++.+. .|.|++
T Consensus 52 ~y~gv~l~~i~~~~~g~--------~~si~yd~~sl~~al~~~~~-~~~~~~ii~ilg~~~g~~~~~~~r~~~~~g~~v~ 122 (185)
T PF09314_consen 52 EYNGVRLVYIPAPKNGS--------AESIIYDFLSLLHALRFIKQ-DKIKYDIILILGYGIGPFFLPFLRKLRKKGGKVV 122 (185)
T ss_pred ccCCeEEEEeCCCCCCc--------hHHHHHHHHHHHHHHHHHhh-ccccCCEEEEEcCCccHHHHHHHHhhhhcCCcEE
Confidence 23478999998775321 11111110111111111111 02357899987776 45555555443 477999
Q ss_pred EEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccC
Q 003987 435 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGI 514 (781)
Q Consensus 435 ~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi 514 (781)
+..|++++.+ ..|..+...|- ...|..+.+.||.+|+-|....+-.++. .+
T Consensus 123 vN~DGlEWkR-----~KW~~~~k~~l----k~~E~~avk~ad~lIaDs~~I~~y~~~~-------------------y~- 173 (185)
T PF09314_consen 123 VNMDGLEWKR-----AKWGRPAKKYL----KFSEKLAVKYADRLIADSKGIQDYIKER-------------------YG- 173 (185)
T ss_pred ECCCcchhhh-----hhcCHHHHHHH----HHHHHHHHHhCCEEEEcCHHHHHHHHHH-------------------cC-
Confidence 9999998744 35555544432 1356789999999999998765522221 11
Q ss_pred CCCCCceEEecCCCc
Q 003987 515 DVFDPKFNIVSPGAD 529 (781)
Q Consensus 515 ~~f~~k~~VIpnGvD 529 (781)
..+..+|++|.|
T Consensus 174 ---~~~s~~IaYGad 185 (185)
T PF09314_consen 174 ---RKKSTFIAYGAD 185 (185)
T ss_pred ---CCCcEEecCCCC
Confidence 378899999987
No 110
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=98.92 E-value=2.2e-07 Score=104.51 Aligned_cols=123 Identities=15% Similarity=0.060 Sum_probs=81.8
Q ss_pred CCCCEEEEEeeccC---CCChHHHHHHHHHhhccCCCeEEE-EEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003987 570 RSKPIVFSMARLDH---VKNMTGLVECYGKNSQLRELVNLV-VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (781)
Q Consensus 570 ~~k~iIl~vGRL~~---~Kgl~~LieA~~~l~~~~~~v~Lv-IVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~f 645 (781)
.+++++++.|+... .+-...+++++... +.+++ .+|.... . . ..+.++|.+
T Consensus 238 ~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~------------~-~-------~~~~~~v~~ 292 (401)
T cd03784 238 GRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGL------------G-A-------EDLPDNVRV 292 (401)
T ss_pred CCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCccc------------c-c-------cCCCCceEE
Confidence 44567788888754 33445556666543 34544 4454433 0 0 245678999
Q ss_pred eccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCCeEEEECCC--CHH
Q 003987 646 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHIDPY--HPD 719 (781)
Q Consensus 646 lG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG----~~EiI~dg~~G~lv~p~--d~~ 719 (781)
.+ .++..++ +. .+|++|+-. -..|+.||+++|+|+|.....+ .++.++..+.|..+++. +.+
T Consensus 293 ~~----~~p~~~l---l~-~~d~~I~hg----G~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~ 360 (401)
T cd03784 293 VD----FVPHDWL---LP-RCAAVVHHG----GAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAE 360 (401)
T ss_pred eC----CCCHHHH---hh-hhheeeecC----CchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHH
Confidence 98 4555555 44 599999652 2479999999999999985554 35556666678887765 688
Q ss_pred HHHHHHHHHH
Q 003987 720 QAAELMADFF 729 (781)
Q Consensus 720 ~lA~~I~~~l 729 (781)
++++++.+++
T Consensus 361 ~l~~al~~~l 370 (401)
T cd03784 361 RLAAALRRLL 370 (401)
T ss_pred HHHHHHHHHh
Confidence 8899998776
No 111
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.83 E-value=2.9e-07 Score=100.02 Aligned_cols=116 Identities=16% Similarity=0.214 Sum_probs=80.7
Q ss_pred CCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 003987 570 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (781)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~ 649 (781)
+.+.+++++|..+.. .++++++.+ ++..++++|.... + ...++|++.++.
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~----~~~~~~v~g~~~~--------------------~--~~~~ni~~~~~~ 240 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKAL----PDYQFIVFGPNAA--------------------D--PRPGNIHVRPFS 240 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhC----CCCeEEEEcCCcc--------------------c--ccCCCEEEeecC
Confidence 345688999987765 667777664 4688888876632 0 015789988743
Q ss_pred cCcCChHHHHHHHHccCcEEEEcCCCCCCcHH-HHHHHHcCCcEEEcCcccccc------ccccCCeEEEECCC--CHHH
Q 003987 650 TNRARNGELYRYIADTKGAFVQPAFYEAFGLT-VVEAMTCGLPTFATCHGGPAE------IIEHGASGFHIDPY--HPDQ 720 (781)
Q Consensus 650 ~~~v~~~el~~~la~aadvfV~PS~~E~fGlt-vlEAMa~GlPVVaT~~gG~~E------iI~dg~~G~lv~p~--d~~~ 720 (781)
..++.++|+. ||++|.-+ |.+ +.||+++|+|++.-...+..| .++..+.|..+++. +++.
T Consensus 241 -----~~~~~~~m~~-ad~vIs~~-----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~ 309 (318)
T PF13528_consen 241 -----TPDFAELMAA-ADLVISKG-----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPER 309 (318)
T ss_pred -----hHHHHHHHHh-CCEEEECC-----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHH
Confidence 3578899995 99999874 555 999999999999986655333 34455567776533 5677
Q ss_pred HHHHHH
Q 003987 721 AAELMA 726 (781)
Q Consensus 721 lA~~I~ 726 (781)
+++.|.
T Consensus 310 l~~~l~ 315 (318)
T PF13528_consen 310 LAEFLE 315 (318)
T ss_pred HHHHHh
Confidence 777764
No 112
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=98.81 E-value=9e-09 Score=108.62 Aligned_cols=182 Identities=15% Similarity=0.119 Sum_probs=100.1
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCcc-Ccceeeec-
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTC-NQRLERVS- 357 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~-~~~~e~v~- 357 (781)
||++||.-..| .-.+||...++. .|+++|+++||+|. |+++.+........ ........
T Consensus 1 kIl~vt~E~~P-------~~k~GGLgdv~~--------~L~kaL~~~G~~V~----Vi~P~y~~~~~~~~~~~~~~~~~~ 61 (245)
T PF08323_consen 1 KILMVTSEYAP-------FAKVGGLGDVVG--------SLPKALAKQGHDVR----VIMPKYGFIDEEYFQLEPVRRLSV 61 (245)
T ss_dssp EEEEE-S-BTT-------TB-SSHHHHHHH--------HHHHHHHHTT-EEE----EEEE-THHHHHHCTTEEEEEEES-
T ss_pred CEEEEEcccCc-------ccccCcHhHHHH--------HHHHHHHhcCCeEE----EEEccchhhhhhhhcceEEEEecc
Confidence 79999987653 236899999999 67777899999999 99887633211100 00000000
Q ss_pred -------------------CCCCeEEEEeccCCCcccccccccccCch-------h-hHHH---HHHHHHHHHHHHcCCC
Q 003987 358 -------------------GTEHTHILRVPFRSEKGILRQWISRFDVW-------P-YLET---FTEDVGSEITAELQGF 407 (781)
Q Consensus 358 -------------------~~~~~~I~rvp~~~~~~~~~~~isr~~i~-------~-yl~~---f~~~~~~~i~~~~~~k 407 (781)
...++.++.+.... +.+|..++ + -.++ |+..+...+ ..+..+
T Consensus 62 ~~~~~v~~~~~~~~~v~~~~~~~v~v~~i~~~~-------~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le~~-~~l~~~ 133 (245)
T PF08323_consen 62 PFGGPVPVGVWYEVRVYRYPVDGVPVYFIDNPE-------YFDRPGIYGDNGGDYPDNAERFAFFSRAALELL-KKLGWK 133 (245)
T ss_dssp STTCEEEEE----EEEEEEEETTEEEEEEESHH-------HHGSSSSSBSTSSBHTTHHHHHHHHHHHHHHHH-CTCT-S
T ss_pred ccccccccccceEEEEEEEEcCCccEEEecChh-------hccccceeccCCCcchhHHHHHHHHHHHHHHHH-HhhCCC
Confidence 01234444442221 12222232 1 1223 333333333 323568
Q ss_pred ceEEEEcCCCchHHHHHHHHHc-------CCcEEEEecCCcccCCCCC------hhhHhh--hhccccchhhhhHHHHHH
Q 003987 408 PDFIIGNYSDGNLVASLLAYKM-------GITQCTIAHALEKTKYPDS------DIYWKK--FDEKYHFSCQFTADLIAM 472 (781)
Q Consensus 408 pDIIh~~~~~~~lva~llar~~-------gvp~v~t~H~l~~~k~~~s------~~~~k~--~~~~y~f~~~~~~e~~a~ 472 (781)
|||||+|.|.+++++.+++... ++|+|+|+|++..+..... .+.+.. ....+.+...+...+.++
T Consensus 134 pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi 213 (245)
T PF08323_consen 134 PDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGI 213 (245)
T ss_dssp -SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHH
T ss_pred CCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHH
Confidence 9999999999999999998876 5999999999765532211 111111 111223333445566789
Q ss_pred hhCCEEEecCHHHHhh
Q 003987 473 NNADFIITSTYQEIAG 488 (781)
Q Consensus 473 ~~AD~IIt~S~~~~~~ 488 (781)
..||.|+|+|+..+..
T Consensus 214 ~~AD~v~TVS~~Ya~E 229 (245)
T PF08323_consen 214 VYADKVTTVSPTYARE 229 (245)
T ss_dssp HHSSEEEESSHHHHHH
T ss_pred HhcCEeeeCCHHHHHH
Confidence 9999999999988663
No 113
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=98.78 E-value=2.9e-06 Score=95.40 Aligned_cols=91 Identities=19% Similarity=0.213 Sum_probs=64.0
Q ss_pred CCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCCeEEEEC
Q 003987 639 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHID 714 (781)
Q Consensus 639 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG----~~EiI~dg~~G~lv~ 714 (781)
+.++|.+.+ .++..+ ++. .+|++|..+- ..|+.|||++|+|+|+....+ ..+.+.+.+.|..++
T Consensus 273 ~~~~v~~~~----~~p~~~---ll~-~~~~~I~hgG----~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~ 340 (392)
T TIGR01426 273 LPPNVEVRQ----WVPQLE---ILK-KADAFITHGG----MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP 340 (392)
T ss_pred CCCCeEEeC----CCCHHH---HHh-hCCEEEECCC----chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec
Confidence 457899888 444444 455 5999998752 248999999999999974333 334455556787776
Q ss_pred CC--CHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q 003987 715 PY--HPDQAAELMADFFGKCKENPSHWKKISDG 745 (781)
Q Consensus 715 p~--d~~~lA~~I~~~l~~l~~dp~~~~~~s~~ 745 (781)
.. ++++++++|.+++ .|+++++++.+-
T Consensus 341 ~~~~~~~~l~~ai~~~l----~~~~~~~~~~~l 369 (392)
T TIGR01426 341 PEEVTAEKLREAVLAVL----SDPRYAERLRKM 369 (392)
T ss_pred cccCCHHHHHHHHHHHh----cCHHHHHHHHHH
Confidence 43 5788999998877 788876665443
No 114
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.69 E-value=4.3e-06 Score=94.50 Aligned_cols=150 Identities=14% Similarity=0.239 Sum_probs=98.0
Q ss_pred CCCEE-EEEeec-c-CCCChHHHHHHHHHhhccCCCeEEEEEe-CcCCCCCCcchHHHHHHHHHHHHHHHcCCC------
Q 003987 571 SKPIV-FSMARL-D-HVKNMTGLVECYGKNSQLRELVNLVVVA-GYIDVNKSKDREEIAEIEKMHELMKTYKLD------ 640 (781)
Q Consensus 571 ~k~iI-l~vGRL-~-~~Kgl~~LieA~~~l~~~~~~v~LvIVG-~g~~~~~~~d~ee~~~~~~l~~li~elgL~------ 640 (781)
++++| +..|.- . ..+++..+++++.++.+. +++.+++.- ++.+ .+.+++..++.+..
T Consensus 204 ~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~~v~~~~~~~~------------~~~~~~~l~~~g~~~~~~~~ 270 (396)
T TIGR03492 204 GRFRIALLPGSRPPEAYRNLKLLLRALEALPDS-QPFVFLAAIVPSLS------------LEKLQAILEDLGWQLEGSSE 270 (396)
T ss_pred CCCEEEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeEEEEEeCCCCC------------HHHHHHHHHhcCceecCCcc
Confidence 34444 444443 2 357788999999999755 678887665 4433 34555555554543
Q ss_pred --------CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccc---ccccccC--
Q 003987 641 --------GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP---AEIIEHG-- 707 (781)
Q Consensus 641 --------~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~---~EiI~dg-- 707 (781)
+++.+..+ ..+++.+++ +||++|..| |.+..|+|++|+|+|.....+. ..+.+..
T Consensus 271 ~~~~~~~~~~~~v~~~------~~~~~~~l~-~ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~ 338 (396)
T TIGR03492 271 DQTSLFQKGTLEVLLG------RGAFAEILH-WADLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSR 338 (396)
T ss_pred ccchhhccCceEEEec------hHhHHHHHH-hCCEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHh
Confidence 12454432 345788888 499999986 5666999999999999874443 2222321
Q ss_pred --CeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 003987 708 --ASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKR 749 (781)
Q Consensus 708 --~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~ 749 (781)
..+..+...+++.+++.+.+++ .|++.+++|.+.++++
T Consensus 339 l~g~~~~l~~~~~~~l~~~l~~ll----~d~~~~~~~~~~~~~~ 378 (396)
T TIGR03492 339 LLGGSVFLASKNPEQAAQVVRQLL----ADPELLERCRRNGQER 378 (396)
T ss_pred hcCCEEecCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHh
Confidence 2344555567899999998877 8999888888544443
No 115
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.69 E-value=4.8e-06 Score=93.07 Aligned_cols=249 Identities=16% Similarity=0.162 Sum_probs=141.2
Q ss_pred HHHHHHHHHHHHHcCCCceEEEEcCC-CchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHH
Q 003987 391 TFTEDVGSEITAELQGFPDFIIGNYS-DGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADL 469 (781)
Q Consensus 391 ~f~~~~~~~i~~~~~~kpDIIh~~~~-~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~ 469 (781)
.....+.+.+.+. +||+|.++.. ...+.+.++|..+++|++. +|+-..+.. ..+... ..
T Consensus 80 ~~~~~~~~~~~~~---~Pd~vlv~GD~~~~la~alaA~~~~IPv~H-veaG~rs~~--------~~eE~~--------r~ 139 (365)
T TIGR03568 80 LTIIGFSDAFERL---KPDLVVVLGDRFEMLAAAIAAALLNIPIAH-IHGGEVTEG--------AIDESI--------RH 139 (365)
T ss_pred HHHHHHHHHHHHh---CCCEEEEeCCchHHHHHHHHHHHhCCcEEE-EECCccCCC--------CchHHH--------HH
Confidence 3333444445444 8999998884 4578889999999999874 344322110 011111 11
Q ss_pred HHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEe-cCCCcCCCCCCCcHHHHHHhhhhc
Q 003987 470 IAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIV-SPGADMDIYFPYSEKQKRLTALHG 548 (781)
Q Consensus 470 ~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VI-pnGvD~~~f~p~~~~~~r~~~~~~ 548 (781)
..-+-|+...+++....+.+.+ -|++ ..++.++ .+++|.-..........
T Consensus 140 ~i~~la~l~f~~t~~~~~~L~~--------------------eg~~--~~~i~~tG~~~iD~l~~~~~~~~~~------- 190 (365)
T TIGR03568 140 AITKLSHLHFVATEEYRQRVIQ--------------------MGED--PDRVFNVGSPGLDNILSLDLLSKEE------- 190 (365)
T ss_pred HHHHHHhhccCCCHHHHHHHHH--------------------cCCC--CCcEEEECCcHHHHHHhhhccCHHH-------
Confidence 2234467777788765442111 1333 4566665 44666432221111111
Q ss_pred chhhhccCccccccccCCCCCCCCCE-EEEEeecc--CC---CChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchH
Q 003987 549 SIEQLLFDPEQNDEHVGTLSDRSKPI-VFSMARLD--HV---KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDRE 622 (781)
Q Consensus 549 ~i~~~l~~~~~~~~~~g~l~~~~k~i-Il~vGRL~--~~---Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~e 622 (781)
..+.+|+ ++++++ ++.+-+-. .. +.+..+++++..+ ..++ +++....++ .
T Consensus 191 -----------~~~~lgl--~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~---~~~~--~vi~P~~~p------~ 246 (365)
T TIGR03568 191 -----------LEEKLGI--DLDKPYALVTFHPVTLEKESAEEQIKELLKALDEL---NKNY--IFTYPNADA------G 246 (365)
T ss_pred -----------HHHHhCC--CCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHh---ccCC--EEEEeCCCC------C
Confidence 1133565 333344 44454432 33 3455555555443 2234 344322111 0
Q ss_pred HHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccc
Q 003987 623 EIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE 702 (781)
Q Consensus 623 e~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~E 702 (781)
+....+.+.++..+ .++|++++ +++..++..+++. |+++|--|. | .+.||.++|+|||. .|.-.|
T Consensus 247 ~~~i~~~i~~~~~~---~~~v~l~~----~l~~~~~l~Ll~~-a~~vitdSS----g-gi~EA~~lg~Pvv~--l~~R~e 311 (365)
T TIGR03568 247 SRIINEAIEEYVNE---HPNFRLFK----SLGQERYLSLLKN-ADAVIGNSS----S-GIIEAPSFGVPTIN--IGTRQK 311 (365)
T ss_pred chHHHHHHHHHhcC---CCCEEEEC----CCChHHHHHHHHh-CCEEEEcCh----h-HHHhhhhcCCCEEe--ecCCch
Confidence 11122333333211 46799998 7888999999996 999886542 2 34899999999995 467888
Q ss_pred ccccCCeEEEECCCCHHHHHHHHHHH
Q 003987 703 IIEHGASGFHIDPYHPDQAAELMADF 728 (781)
Q Consensus 703 iI~dg~~G~lv~p~d~~~lA~~I~~~ 728 (781)
.++.|.+++++ +.|++++.+++.++
T Consensus 312 ~~~~g~nvl~v-g~~~~~I~~a~~~~ 336 (365)
T TIGR03568 312 GRLRADSVIDV-DPDKEEIVKAIEKL 336 (365)
T ss_pred hhhhcCeEEEe-CCCHHHHHHHHHHH
Confidence 88888888888 45899999999774
No 116
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.65 E-value=4.9e-07 Score=86.01 Aligned_cols=123 Identities=22% Similarity=0.233 Sum_probs=80.1
Q ss_pred HHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHH
Q 003987 318 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVG 397 (781)
Q Consensus 318 eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~ 397 (781)
++++.|.++|++|+ |+|..... +.....+++.+++++.... ...+++. +. .+.
T Consensus 15 ~~~~~L~~~g~~V~----ii~~~~~~----------~~~~~~~~i~~~~~~~~~k-----------~~~~~~~-~~-~l~ 67 (139)
T PF13477_consen 15 NLAKELKKRGYDVH----IITPRNDY----------EKYEIIEGIKVIRLPSPRK-----------SPLNYIK-YF-RLR 67 (139)
T ss_pred HHHHHHHHCCCEEE----EEEcCCCc----------hhhhHhCCeEEEEecCCCC-----------ccHHHHH-HH-HHH
Confidence 66778899999999 99874221 1111233678888864421 1444553 22 455
Q ss_pred HHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcC-CcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhC
Q 003987 398 SEITAELQGFPDFIIGNYSDG-NLVASLLAYKMG-ITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNA 475 (781)
Q Consensus 398 ~~i~~~~~~kpDIIh~~~~~~-~lva~llar~~g-vp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~A 475 (781)
+.+.+. +||+||+|...+ ++++.++++..+ +|++++.|+...... .. ..+ .+++ ....+++.|
T Consensus 68 k~ik~~---~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~~--~~-~~~----~~~~-----~~~~~~k~~ 132 (139)
T PF13477_consen 68 KIIKKE---KPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYNS--SK-KKK----LKKF-----IIKFAFKRA 132 (139)
T ss_pred HHhccC---CCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeecC--Cc-hHH----HHHH-----HHHHHHHhC
Confidence 555543 899999999887 788989999999 999999998644221 11 110 1111 234688999
Q ss_pred CEEEecC
Q 003987 476 DFIITST 482 (781)
Q Consensus 476 D~IIt~S 482 (781)
|.|++.|
T Consensus 133 ~~ii~~~ 139 (139)
T PF13477_consen 133 DKIIVQS 139 (139)
T ss_pred CEEEEcC
Confidence 9999875
No 117
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.56 E-value=4.3e-05 Score=84.77 Aligned_cols=263 Identities=15% Similarity=0.172 Sum_probs=166.6
Q ss_pred CceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHH
Q 003987 407 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 486 (781)
Q Consensus 407 kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~ 486 (781)
+||+.+.-.+.....-..-+++.|+|++..-=-+.. .|-..|+.+ .+ .....+...|.|++-|+...
T Consensus 123 ~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRLS~----rS~~~y~k~-------~~--~~~~~~~~i~li~aQse~D~ 189 (419)
T COG1519 123 RPKLLIIMETELWPNLINELKRRGIPLVLVNARLSD----RSFARYAKL-------KF--LARLLFKNIDLILAQSEEDA 189 (419)
T ss_pred CCCEEEEEeccccHHHHHHHHHcCCCEEEEeeeech----hhhHHHHHH-------HH--HHHHHHHhcceeeecCHHHH
Confidence 899988776665444455677889998864221111 011122222 22 13356788999999998776
Q ss_pred hhccccccccccccccccccceeeeccCCCCCCceEEecCC-CcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccC
Q 003987 487 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (781)
Q Consensus 487 ~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnG-vD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g 565 (781)
+ +|.+. |+ .++.+.-|= .|.+ +.+........ .+.+++
T Consensus 190 ~-------Rf~~L-------------Ga----~~v~v~GNlKfd~~---~~~~~~~~~~~--------------~r~~l~ 228 (419)
T COG1519 190 Q-------RFRSL-------------GA----KPVVVTGNLKFDIE---PPPQLAAELAA--------------LRRQLG 228 (419)
T ss_pred H-------HHHhc-------------CC----cceEEecceeecCC---CChhhHHHHHH--------------HHHhcC
Confidence 5 23222 32 234443331 1111 11111111111 112233
Q ss_pred CCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCC----
Q 003987 566 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDG---- 641 (781)
Q Consensus 566 ~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~---- 641 (781)
..+++++..+. ...--+.+++++..+++.+|++.+++|=..|+ ..+...+++++.|+.-
T Consensus 229 ----~~r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~llIlVPRHpE-----------Rf~~v~~l~~~~gl~~~~rS 291 (419)
T COG1519 229 ----GHRPVWVAAST--HEGEEEIILDAHQALKKQFPNLLLILVPRHPE-----------RFKAVENLLKRKGLSVTRRS 291 (419)
T ss_pred ----CCCceEEEecC--CCchHHHHHHHHHHHHhhCCCceEEEecCChh-----------hHHHHHHHHHHcCCeEEeec
Confidence 22677777776 33334558899999999999999999988875 4678888999988731
Q ss_pred --------cEEEeccccCcCChHHHHHHHHccCcE-EEEcCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccCC
Q 003987 642 --------QFRWIAAQTNRARNGELYRYIADTKGA-FVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHGA 708 (781)
Q Consensus 642 --------~V~flG~~~~~v~~~el~~~la~aadv-fV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI~dg~ 708 (781)
.=.++| -..+|+..+|. .+|+ ||=-|+.+-=|--++|+.++|+|||.- +.....+-+...+
T Consensus 292 ~~~~~~~~tdV~l~-----DtmGEL~l~y~-~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~g 365 (419)
T COG1519 292 QGDPPFSDTDVLLG-----DTMGELGLLYG-IADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAG 365 (419)
T ss_pred CCCCCCCCCcEEEE-----ecHhHHHHHHh-hccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcC
Confidence 012333 14689999999 5886 555677766688899999999999986 3444444455566
Q ss_pred eEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH
Q 003987 709 SGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (781)
Q Consensus 709 ~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~ 752 (781)
.|+.++ |.+.+++++..++ .|++.++++++++...+.+
T Consensus 366 a~~~v~--~~~~l~~~v~~l~----~~~~~r~~~~~~~~~~v~~ 403 (419)
T COG1519 366 AGLQVE--DADLLAKAVELLL----ADEDKREAYGRAGLEFLAQ 403 (419)
T ss_pred CeEEEC--CHHHHHHHHHHhc----CCHHHHHHHHHHHHHHHHH
Confidence 788887 5666777765444 8899999999999998864
No 118
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=98.50 E-value=2e-05 Score=86.45 Aligned_cols=75 Identities=13% Similarity=0.151 Sum_probs=53.9
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccc------ccccCCeEEEE
Q 003987 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE------IIEHGASGFHI 713 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~E------iI~dg~~G~lv 713 (781)
.+++.+.++. + .++..++.. +|++|.-+-+ .++.||+++|+|++.....+..| .+++.+.|..+
T Consensus 228 ~~~v~~~~~~----~-~~~~~~l~~-ad~vI~~~G~----~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l 297 (321)
T TIGR00661 228 NENVEIRRIT----T-DNFKELIKN-AELVITHGGF----SLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL 297 (321)
T ss_pred CCCEEEEECC----h-HHHHHHHHh-CCEEEECCCh----HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc
Confidence 4688888742 2 478888895 9999998632 47999999999999987655333 45566778888
Q ss_pred CCCCHHHHHHHH
Q 003987 714 DPYHPDQAAELM 725 (781)
Q Consensus 714 ~p~d~~~lA~~I 725 (781)
+..+. ++.+++
T Consensus 298 ~~~~~-~~~~~~ 308 (321)
T TIGR00661 298 EYKEL-RLLEAI 308 (321)
T ss_pred ChhhH-HHHHHH
Confidence 77666 333333
No 119
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.32 E-value=4.9e-05 Score=84.40 Aligned_cols=262 Identities=15% Similarity=0.172 Sum_probs=139.6
Q ss_pred HHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHH
Q 003987 393 TEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIA 471 (781)
Q Consensus 393 ~~~~~~~i~~~~~~kpDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a 471 (781)
...+...+.+. +||+|..+.-.. .+.++++|..+++|++ .+|+--.+. +..-...+...| ..+
T Consensus 56 ~~~~~~~~~~~---~Pd~Vlv~GD~~~~la~alaA~~~~ipv~-HieaGlRs~----d~~~g~~de~~R--------~~i 119 (346)
T PF02350_consen 56 IIELADVLERE---KPDAVLVLGDRNEALAAALAAFYLNIPVA-HIEAGLRSG----DRTEGMPDEINR--------HAI 119 (346)
T ss_dssp HHHHHHHHHHH---T-SEEEEETTSHHHHHHHHHHHHTT-EEE-EES-----S-----TTSSTTHHHHH--------HHH
T ss_pred HHHHHHHHHhc---CCCEEEEEcCCchHHHHHHHHHHhCCCEE-EecCCCCcc----ccCCCCchhhhh--------hhh
Confidence 33444445544 999999887554 6788999999999954 445421100 000001122111 123
Q ss_pred HhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecC-CCcCCCCCCCcHHHHHHhhhhcch
Q 003987 472 MNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYFPYSEKQKRLTALHGSI 550 (781)
Q Consensus 472 ~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpn-GvD~~~f~p~~~~~~r~~~~~~~i 550 (781)
-+-||.-+++|....+.+.+ -|++ ..++.++-| ++|.-.. .. ....+..
T Consensus 120 ~~la~lhf~~t~~~~~~L~~--------------------~G~~--~~rI~~vG~~~~D~l~~-----~~---~~~~~~~ 169 (346)
T PF02350_consen 120 DKLAHLHFAPTEEARERLLQ--------------------EGEP--PERIFVVGNPGIDALLQ-----NK---EEIEEKY 169 (346)
T ss_dssp HHH-SEEEESSHHHHHHHHH--------------------TT----GGGEEE---HHHHHHHH-----HH---HTTCC-H
T ss_pred hhhhhhhccCCHHHHHHHHh--------------------cCCC--CCeEEEEChHHHHHHHH-----hH---HHHhhhh
Confidence 45689999999877653222 2444 668877744 3332100 00 0000000
Q ss_pred hhhccCccccccccCCCC-CCCCCEEEEEeeccC---CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHH
Q 003987 551 EQLLFDPEQNDEHVGTLS-DRSKPIVFSMARLDH---VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAE 626 (781)
Q Consensus 551 ~~~l~~~~~~~~~~g~l~-~~~k~iIl~vGRL~~---~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~ 626 (781)
. ..++.. .+++.++++.=|... ......+.+++..+.+. +++++++.....+ ..
T Consensus 170 ~-----------~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p----------~~ 227 (346)
T PF02350_consen 170 K-----------NSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNP----------RG 227 (346)
T ss_dssp H-----------HHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-H----------HH
T ss_pred h-----------hHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCc----------hH
Confidence 0 002211 233444555534332 34567788888888776 6788888887544 22
Q ss_pred HHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHH-HHHHcCCcEEEc-Ccccccccc
Q 003987 627 IEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVV-EAMTCGLPTFAT-CHGGPAEII 704 (781)
Q Consensus 627 ~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvl-EAMa~GlPVVaT-~~gG~~EiI 704 (781)
...+.+..+++ ++|+++. +++..++..+++. +++.|-=| | .+. ||.++|+|||.- +.|.-.+.+
T Consensus 228 ~~~i~~~l~~~---~~v~~~~----~l~~~~~l~ll~~-a~~vvgdS-----s-GI~eEa~~lg~P~v~iR~~geRqe~r 293 (346)
T PF02350_consen 228 SDIIIEKLKKY---DNVRLIE----PLGYEEYLSLLKN-ADLVVGDS-----S-GIQEEAPSLGKPVVNIRDSGERQEGR 293 (346)
T ss_dssp HHHHHHHHTT----TTEEEE--------HHHHHHHHHH-ESEEEESS-----H-HHHHHGGGGT--EEECSSS-S-HHHH
T ss_pred HHHHHHHhccc---CCEEEEC----CCCHHHHHHHHhc-ceEEEEcC-----c-cHHHHHHHhCCeEEEecCCCCCHHHH
Confidence 44555555544 3899998 7888999999995 88777654 6 788 999999999998 456666676
Q ss_pred ccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHH
Q 003987 705 EHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKI 742 (781)
Q Consensus 705 ~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~ 742 (781)
..+.+-+ +. .|.+++.++|.+++ .+++.+.++
T Consensus 294 ~~~~nvl-v~-~~~~~I~~ai~~~l----~~~~~~~~~ 325 (346)
T PF02350_consen 294 ERGSNVL-VG-TDPEAIIQAIEKAL----SDKDFYRKL 325 (346)
T ss_dssp HTTSEEE-ET-SSHHHHHHHHHHHH----H-HHHHHHH
T ss_pred hhcceEE-eC-CCHHHHHHHHHHHH----hChHHHHhh
Confidence 6666555 76 69999999998877 454444443
No 120
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=98.27 E-value=1.6e-05 Score=90.45 Aligned_cols=187 Identities=11% Similarity=0.077 Sum_probs=120.5
Q ss_pred cccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc
Q 003987 558 EQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY 637 (781)
Q Consensus 558 ~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el 637 (781)
...|+.+|+ +.+..++++..++ .|=-...++++.++.+.-|+.+|++...... ..+.+++.+.+.
T Consensus 273 ~~~R~~~gL--p~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~-----------~~~~l~~~~~~~ 337 (468)
T PF13844_consen 273 VTTRAQYGL--PEDAVVFGSFNNL--FKISPETLDLWARILKAVPNSRLWLLRFPAS-----------GEARLRRRFAAH 337 (468)
T ss_dssp EEETGGGT----SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEEEEEEETSTT-----------HHHHHHHHHHHT
T ss_pred ccCHHHcCC--CCCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcEEEEeeCCHH-----------HHHHHHHHHHHc
Confidence 345788999 5566555555554 5666888999999988889999998875432 135788889999
Q ss_pred CCC-CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccccc-----c-cCCeE
Q 003987 638 KLD-GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEII-----E-HGASG 710 (781)
Q Consensus 638 gL~-~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI-----~-dg~~G 710 (781)
|+. ++|.|.+ ..+.++-.+.+.. +|+++=|-.+-| |.|.+||+.+|+|||+-.....+.-+ . -|-..
T Consensus 338 Gv~~~Ri~f~~----~~~~~ehl~~~~~-~DI~LDT~p~nG-~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~E 411 (468)
T PF13844_consen 338 GVDPDRIIFSP----VAPREEHLRRYQL-ADICLDTFPYNG-GTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPE 411 (468)
T ss_dssp TS-GGGEEEEE-------HHHHHHHGGG--SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GG
T ss_pred CCChhhEEEcC----CCCHHHHHHHhhh-CCEEeeCCCCCC-cHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCch
Confidence 986 7899988 5556677777774 999999854444 78999999999999986422222111 1 12233
Q ss_pred EEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHh
Q 003987 711 FHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINV 771 (781)
Q Consensus 711 ~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~ 771 (781)
++. .|.++..+.-.++. .|++.++++++.-+++..+.-=|+....++..|+.+..
T Consensus 412 lIA--~s~~eYv~~Av~La----~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~ 466 (468)
T PF13844_consen 412 LIA--DSEEEYVEIAVRLA----TDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQ 466 (468)
T ss_dssp GB---SSHHHHHHHHHHHH----H-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHH
T ss_pred hcC--CCHHHHHHHHHHHh----CCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence 333 37899988887776 89999999999998888666567777777777777653
No 121
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.26 E-value=0.00012 Score=78.96 Aligned_cols=97 Identities=14% Similarity=0.248 Sum_probs=70.6
Q ss_pred CCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEE-EEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003987 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLV-VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (781)
Q Consensus 572 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~Lv-IVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~ 650 (781)
+.+++++|..+..+....+++++.++. +++++. |+|.+.. ..+++++.++.. ++|++.++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~~i~vv~G~~~~-----------~~~~l~~~~~~~---~~i~~~~~-- 231 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ---INISITLVTGSSNP-----------NLDELKKFAKEY---PNIILFID-- 231 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc---cCceEEEEECCCCc-----------CHHHHHHHHHhC---CCEEEEeC--
Confidence 457899999998776678888887653 344443 5565533 135566666553 47888874
Q ss_pred CcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCc
Q 003987 651 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH 697 (781)
Q Consensus 651 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~ 697 (781)
..++..+|+. +|++|.+ -|.|+.|++++|+|+|+...
T Consensus 232 ----~~~m~~lm~~-aDl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 232 ----VENMAELMNE-ADLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred ----HHHHHHHHHH-CCEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 3468889995 9999995 57999999999999998754
No 122
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=98.16 E-value=0.00097 Score=77.85 Aligned_cols=138 Identities=14% Similarity=0.013 Sum_probs=90.2
Q ss_pred CCEEEEEeeccCC-----CChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003987 572 KPIVFSMARLDHV-----KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (781)
Q Consensus 572 k~iIl~vGRL~~~-----Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~fl 646 (781)
++++++.|..... +-+..+++|++++. .++++..++.. .. .+++++|.+.
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~-----~~viw~~~~~~------------~~--------~~~p~Nv~i~ 351 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-----YNVLWKYDGEV------------EA--------INLPANVLTQ 351 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC-----CeEEEEECCCc------------Cc--------ccCCCceEEe
Confidence 4678889987532 23456667776553 46665555422 00 2457889988
Q ss_pred ccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccCCeEEEECCC--CHHH
Q 003987 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEHGASGFHIDPY--HPDQ 720 (781)
Q Consensus 647 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~----~gG~~EiI~dg~~G~lv~p~--d~~~ 720 (781)
+ ++|..++... . .+++||.= |=..++.||+.+|+|+|+.. ....+..++..+.|..++.. +.++
T Consensus 352 ~----w~Pq~~lL~h-p-~v~~fItH----GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~ 421 (507)
T PHA03392 352 K----WFPQRAVLKH-K-NVKAFVTQ----GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQ 421 (507)
T ss_pred c----CCCHHHHhcC-C-CCCEEEec----CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHH
Confidence 8 5555555421 2 36788875 22568999999999999973 34455566666788888754 5678
Q ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHHH
Q 003987 721 AAELMADFFGKCKENPSHWKKISDGGLK 748 (781)
Q Consensus 721 lA~~I~~~l~~l~~dp~~~~~~s~~a~~ 748 (781)
+.++|.+++ .||.+++...+-+..
T Consensus 422 l~~ai~~vl----~~~~y~~~a~~ls~~ 445 (507)
T PHA03392 422 LVLAIVDVI----ENPKYRKNLKELRHL 445 (507)
T ss_pred HHHHHHHHh----CCHHHHHHHHHHHHH
Confidence 888887777 888877765554433
No 123
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=98.05 E-value=0.00046 Score=77.12 Aligned_cols=241 Identities=21% Similarity=0.202 Sum_probs=139.3
Q ss_pred CCCceEEEEcC-CCchHHHHHHHHHcCCc--EEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEec
Q 003987 405 QGFPDFIIGNY-SDGNLVASLLAYKMGIT--QCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITS 481 (781)
Q Consensus 405 ~~kpDIIh~~~-~~~~lva~llar~~gvp--~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~ 481 (781)
..+||+++.-+ ++.|+-.....|+.|++ +++.+- + +-+.|+.-. -...-+.+|.+++.
T Consensus 80 ~~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI~---P-----qvWAWr~~R-----------~~~i~~~~D~ll~i 140 (373)
T PF02684_consen 80 EEKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYIS---P-----QVWAWRPGR-----------AKKIKKYVDHLLVI 140 (373)
T ss_pred HcCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEEC---C-----ceeeeCccH-----------HHHHHHHHhheeEC
Confidence 45999999555 55587777777788877 654431 1 112232111 11234567888888
Q ss_pred CHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCC-CcCCCCCCCcHHHHHHhhhhcchhhhccCcccc
Q 003987 482 TYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (781)
Q Consensus 482 S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnG-vD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 560 (781)
=+-|.+ -|+. +| -++..|-|. +|.-...+. ....
T Consensus 141 fPFE~~-------~y~~-------------~g-----~~~~~VGHPl~d~~~~~~~--~~~~------------------ 175 (373)
T PF02684_consen 141 FPFEPE-------FYKK-------------HG-----VPVTYVGHPLLDEVKPEPD--RAEA------------------ 175 (373)
T ss_pred CcccHH-------HHhc-------------cC-----CCeEEECCcchhhhccCCC--HHHH------------------
Confidence 776654 1221 12 245555443 343221111 1111
Q ss_pred ccccCCCCCCCCCEEEE-Ee-eccC-CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc
Q 003987 561 DEHVGTLSDRSKPIVFS-MA-RLDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY 637 (781)
Q Consensus 561 ~~~~g~l~~~~k~iIl~-vG-RL~~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el 637 (781)
++++ + ++++++|.. .| |-.+ .+.+..++++++++.+.+|++++++...... ..+.+.+.....
T Consensus 176 ~~~~-l--~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~-----------~~~~i~~~~~~~ 241 (373)
T PF02684_consen 176 REKL-L--DPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEV-----------HEELIEEILAEY 241 (373)
T ss_pred HHhc-C--CCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHH-----------HHHHHHHHHHhh
Confidence 1223 3 456666544 44 4444 4455888999999999999999998765432 123355555555
Q ss_pred CCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-cc----------------cc
Q 003987 638 KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HG----------------GP 700 (781)
Q Consensus 638 gL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~-~g----------------G~ 700 (781)
+..-.+.... ++-+..++. ||+.+..| |.+.+|++.+|+|.|..- .+ |+
T Consensus 242 ~~~~~~~~~~--------~~~~~~m~~-ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL 307 (373)
T PF02684_consen 242 PPDVSIVIIE--------GESYDAMAA-ADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISL 307 (373)
T ss_pred CCCCeEEEcC--------CchHHHHHh-CcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeec
Confidence 5433344332 256778884 99888876 999999999999999863 22 22
Q ss_pred ccccccCC--eEEEECCCCHHHHHHHHHHHHHhccCCHHHHHH
Q 003987 701 AEIIEHGA--SGFHIDPYHPDQAAELMADFFGKCKENPSHWKK 741 (781)
Q Consensus 701 ~EiI~dg~--~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~ 741 (781)
+.++-+.. --++-+.-+++.+++++.+++ .|++.++.
T Consensus 308 ~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll----~~~~~~~~ 346 (373)
T PF02684_consen 308 PNIIAGREVVPELIQEDATPENIAAELLELL----ENPEKRKK 346 (373)
T ss_pred hhhhcCCCcchhhhcccCCHHHHHHHHHHHh----cCHHHHHH
Confidence 22221111 112223458899999998877 78776444
No 124
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=97.94 E-value=0.0018 Score=71.54 Aligned_cols=62 Identities=16% Similarity=0.188 Sum_probs=44.1
Q ss_pred HHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc---cccccccCCeEEEECCCCHHHHHHHHHHH
Q 003987 659 YRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG---PAEIIEHGASGFHIDPYHPDQAAELMADF 728 (781)
Q Consensus 659 ~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG---~~EiI~dg~~G~lv~p~d~~~lA~~I~~~ 728 (781)
..+++- ||++|-- -|....||...|+|+|.+..|- .-+.+. +.|+++...|++++.+.+...
T Consensus 243 ~~Ll~~-a~l~Ig~-----ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~--~~Gll~~~~~~~ei~~~v~~~ 307 (335)
T PF04007_consen 243 LDLLYY-ADLVIGG-----GGTMAREAALLGTPAISCFPGKLLAVDKYLI--EKGLLYHSTDPDEIVEYVRKN 307 (335)
T ss_pred HHHHHh-cCEEEeC-----CcHHHHHHHHhCCCEEEecCCcchhHHHHHH--HCCCeEecCCHHHHHHHHHHh
Confidence 356663 8888865 3677899999999999875442 223332 347888888999988866543
No 125
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=97.89 E-value=3.2e-05 Score=84.91 Aligned_cols=94 Identities=28% Similarity=0.356 Sum_probs=64.3
Q ss_pred HHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccc----cccccC-CeEEEE-C------CCCHHHHHHHHHH
Q 003987 660 RYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPA----EIIEHG-ASGFHI-D------PYHPDQAAELMAD 727 (781)
Q Consensus 660 ~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~----EiI~dg-~~G~lv-~------p~d~~~lA~~I~~ 727 (781)
.+.. .+.+.|+||+||++|.|..|.-.+|+|-|.|+..|.. |.|++. ..|+.+ | ....++++.-+.+
T Consensus 496 eFVR-GCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~~ 574 (692)
T KOG3742|consen 496 EFVR-GCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMYE 574 (692)
T ss_pred HHhc-cccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHHH
Confidence 3444 5999999999999999999999999999999987754 444432 346654 2 1234455555555
Q ss_pred HHHhccCCHHHHHHHHHHH-HHHHHHhcCcchh
Q 003987 728 FFGKCKENPSHWKKISDGG-LKRIYERLVVSSD 759 (781)
Q Consensus 728 ~l~~l~~dp~~~~~~s~~a-~~~~~~~ysw~~~ 759 (781)
|. ....|+++.++. -++..+-.+|+.+
T Consensus 575 F~-----~qsRRQRIiqRNrtErLSdLLDWk~l 602 (692)
T KOG3742|consen 575 FC-----KQSRRQRIIQRNRTERLSDLLDWKYL 602 (692)
T ss_pred HH-----HHHHHHHHHHhcchhhHHHHHhHHHH
Confidence 43 345566665544 3566667788766
No 126
>PLN02448 UDP-glycosyltransferase family protein
Probab=97.80 E-value=0.017 Score=66.70 Aligned_cols=139 Identities=13% Similarity=0.131 Sum_probs=78.9
Q ss_pred CCCEEEEEeeccC--CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003987 571 SKPIVFSMARLDH--VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (781)
Q Consensus 571 ~k~iIl~vGRL~~--~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~ 648 (781)
...+.++.|.... .+-+..++++++.. +..++++..+.. ..+.+.. .+++...+
T Consensus 274 ~~vvyvsfGs~~~~~~~~~~~~~~~l~~~-----~~~~lw~~~~~~-------------~~~~~~~-----~~~~~v~~- 329 (459)
T PLN02448 274 GSVLYVSLGSFLSVSSAQMDEIAAGLRDS-----GVRFLWVARGEA-------------SRLKEIC-----GDMGLVVP- 329 (459)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCch-------------hhHhHhc-----cCCEEEec-
Confidence 4467788887643 22345555555543 457776654321 0111111 24566666
Q ss_pred ccCcCChHHHHHHHHccCcE--EEEcCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccC-CeEEEECC------
Q 003987 649 QTNRARNGELYRYIADTKGA--FVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEHG-ASGFHIDP------ 715 (781)
Q Consensus 649 ~~~~v~~~el~~~la~aadv--fV~PS~~E~fGltvlEAMa~GlPVVaT~----~gG~~EiI~dg-~~G~lv~p------ 715 (781)
+++..++.. ..++ ||.= +=-.+++||+++|+|+|+-. ....+..+.+. +.|+-+..
T Consensus 330 ---w~pQ~~iL~----h~~v~~fvtH----gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~ 398 (459)
T PLN02448 330 ---WCDQLKVLC----HSSVGGFWTH----CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEET 398 (459)
T ss_pred ---cCCHHHHhc----cCccceEEec----CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCC
Confidence 555556655 3443 5553 22358999999999999963 34445555542 45666631
Q ss_pred -CCHHHHHHHHHHHHHhccCCH-HHHHHHHHHHHH
Q 003987 716 -YHPDQAAELMADFFGKCKENP-SHWKKISDGGLK 748 (781)
Q Consensus 716 -~d~~~lA~~I~~~l~~l~~dp-~~~~~~s~~a~~ 748 (781)
-+.+++++++.+++ .++ +..++|.+++.+
T Consensus 399 ~~~~~~l~~av~~vl----~~~~~~~~~~r~~a~~ 429 (459)
T PLN02448 399 LVGREEIAELVKRFM----DLESEEGKEMRRRAKE 429 (459)
T ss_pred cCcHHHHHHHHHHHh----cCCchhHHHHHHHHHH
Confidence 36788888888877 553 334444444443
No 127
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=97.71 E-value=0.00058 Score=77.53 Aligned_cols=136 Identities=14% Similarity=0.117 Sum_probs=91.9
Q ss_pred CCCEEEEEeeccCCCChHHHHHHH-HHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 003987 571 SKPIVFSMARLDHVKNMTGLVECY-GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (781)
Q Consensus 571 ~k~iIl~vGRL~~~Kgl~~LieA~-~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~ 649 (781)
.+++.++.|..... ..+++.+ ..+... ++++++..++.+ . ..-++++++...+
T Consensus 237 ~~~vyvslGt~~~~---~~l~~~~~~a~~~l--~~~vi~~~~~~~------------------~-~~~~~p~n~~v~~-- 290 (406)
T COG1819 237 RPIVYVSLGTVGNA---VELLAIVLEALADL--DVRVIVSLGGAR------------------D-TLVNVPDNVIVAD-- 290 (406)
T ss_pred CCeEEEEcCCcccH---HHHHHHHHHHHhcC--CcEEEEeccccc------------------c-ccccCCCceEEec--
Confidence 44556777776654 3333332 233232 577777776522 0 1235678898887
Q ss_pred cCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccCCeEEEEC--CCCHHHHHH
Q 003987 650 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEHGASGFHID--PYHPDQAAE 723 (781)
Q Consensus 650 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~----~gG~~EiI~dg~~G~lv~--p~d~~~lA~ 723 (781)
.++..++.. .+|++|+.. | -.++.||+.+|+|+|+-- ....++-+++-..|..+. ..+.+.+++
T Consensus 291 --~~p~~~~l~----~ad~vI~hG---G-~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~ 360 (406)
T COG1819 291 --YVPQLELLP----RADAVIHHG---G-AGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLRA 360 (406)
T ss_pred --CCCHHHHhh----hcCEEEecC---C-cchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHHH
Confidence 555556544 699999983 3 348899999999999963 334666777778898887 579999999
Q ss_pred HHHHHHHhccCCHHHHHHHHHHH
Q 003987 724 LMADFFGKCKENPSHWKKISDGG 746 (781)
Q Consensus 724 ~I~~~l~~l~~dp~~~~~~s~~a 746 (781)
+|.+++ .|+.+++...+..
T Consensus 361 av~~vL----~~~~~~~~~~~~~ 379 (406)
T COG1819 361 AVNEVL----ADDSYRRAAERLA 379 (406)
T ss_pred HHHHHh----cCHHHHHHHHHHH
Confidence 998887 7887766655433
No 128
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.56 E-value=0.0073 Score=70.82 Aligned_cols=250 Identities=16% Similarity=0.173 Sum_probs=134.3
Q ss_pred CCCceEEEEc-CCCchHHHHHHHHHcCC--cEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEec
Q 003987 405 QGFPDFIIGN-YSDGNLVASLLAYKMGI--TQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITS 481 (781)
Q Consensus 405 ~~kpDIIh~~-~~~~~lva~llar~~gv--p~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~ 481 (781)
..+||++++- +++.|+-....+|+.|+ |+++.+- + +-+.|+.-. -...-+.+|.++|.
T Consensus 308 ~~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVs---P-----qVWAWR~~R-----------ikki~k~vD~ll~I 368 (608)
T PRK01021 308 KTNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVC---P-----SIWAWRPKR-----------KTILEKYLDLLLLI 368 (608)
T ss_pred hcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEEC---c-----cceeeCcch-----------HHHHHHHhhhheec
Confidence 4599999964 45558766667777885 8775442 1 112232111 11234567888887
Q ss_pred CHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCC-CcCCCCCCCcHHHHHHhhhhcchhhhccCcccc
Q 003987 482 TYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (781)
Q Consensus 482 S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnG-vD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 560 (781)
=+-|.+ +|+. +|+ +++.|-|. +|.-...+.....
T Consensus 369 fPFE~~-------------------~y~~-~gv-----~v~yVGHPL~d~i~~~~~~~~~-------------------- 403 (608)
T PRK01021 369 LPFEQN-------------------LFKD-SPL-----RTVYLGHPLVETISSFSPNLSW-------------------- 403 (608)
T ss_pred CccCHH-------------------HHHh-cCC-----CeEEECCcHHhhcccCCCHHHH--------------------
Confidence 776644 2221 232 44455433 3442212222111
Q ss_pred ccccCCCCCCCCCEE-EEEe-eccC-CCChHHHHHHHH--HhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH
Q 003987 561 DEHVGTLSDRSKPIV-FSMA-RLDH-VKNMTGLVECYG--KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 635 (781)
Q Consensus 561 ~~~~g~l~~~~k~iI-l~vG-RL~~-~Kgl~~LieA~~--~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~ 635 (781)
++++|+ ++++++| +..| |-.+ .+.+..+++++. ++.+ +.++++.... . ...+.+++..+
T Consensus 404 r~~lgl--~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~---~l~fvvp~a~-~----------~~~~~i~~~~~ 467 (608)
T PRK01021 404 KEQLHL--PSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLAS---THQLLVSSAN-P----------KYDHLILEVLQ 467 (608)
T ss_pred HHHcCC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhcc---CeEEEEecCc-h----------hhHHHHHHHHh
Confidence 234666 4455655 3444 4444 556677888887 4433 5777664322 1 11344455554
Q ss_pred HcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-cc----------------
Q 003987 636 TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HG---------------- 698 (781)
Q Consensus 636 elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~-~g---------------- 698 (781)
..++ -.+..+. ..+-+..++ +||+.+..| |.+.+|++.+|+|.|..- .+
T Consensus 468 ~~~~-~~~~ii~-------~~~~~~~m~-aaD~aLaaS-----GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~ 533 (608)
T PRK01021 468 QEGC-LHSHIVP-------SQFRYELMR-ECDCALAKC-----GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILP 533 (608)
T ss_pred hcCC-CCeEEec-------CcchHHHHH-hcCeeeecC-----CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCC
Confidence 3331 1234432 012367777 599998886 999999999999999862 22
Q ss_pred --ccccccccCC-eEEEE---CCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc
Q 003987 699 --GPAEIIEHGA-SGFHI---DPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERL 754 (781)
Q Consensus 699 --G~~EiI~dg~-~G~lv---~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~y 754 (781)
+.+.++.+.. .=-++ +.-+++.+++++ +++ .|++.++++.+. .+.+.+..
T Consensus 534 yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL----~d~~~r~~~~~~-l~~lr~~L 589 (608)
T PRK01021 534 AYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DIL----KTSQSKEKQKDA-CRDLYQAM 589 (608)
T ss_pred eeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHh----cCHHHHHHHHHH-HHHHHHHh
Confidence 1122221111 01122 234788888885 655 788877776654 34444433
No 129
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.41 E-value=0.0023 Score=70.58 Aligned_cols=200 Identities=19% Similarity=0.166 Sum_probs=116.1
Q ss_pred CCCceEEEEcCCC-chHHHHHHHHHcC--CcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEec
Q 003987 405 QGFPDFIIGNYSD-GNLVASLLAYKMG--ITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITS 481 (781)
Q Consensus 405 ~~kpDIIh~~~~~-~~lva~llar~~g--vp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~ 481 (781)
..+||++++-++. .|+-....-|+.| +|+|+.+- + +-+.|+.-. -....+.+|++.+.
T Consensus 83 ~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~---P-----sVWAWr~~R-----------a~~i~~~~D~lLai 143 (381)
T COG0763 83 ANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS---P-----SVWAWRPKR-----------AVKIAKYVDHLLAI 143 (381)
T ss_pred hcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC---c-----ceeeechhh-----------HHHHHHHhhHeeee
Confidence 4599999976655 4655444455556 77775442 1 223343221 12356789999998
Q ss_pred CHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecC-CCcCCCCCCCcHHHHHHhhhhcchhhhccCcccc
Q 003987 482 TYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (781)
Q Consensus 482 S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpn-GvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 560 (781)
=+-|.+ +|.. .|+ ..+.|-+ =+|.-.+.+.... .
T Consensus 144 lPFE~~-------------------~y~k-~g~-----~~~yVGHpl~d~i~~~~~r~~--------------------a 178 (381)
T COG0763 144 LPFEPA-------------------FYDK-FGL-----PCTYVGHPLADEIPLLPDREA--------------------A 178 (381)
T ss_pred cCCCHH-------------------HHHh-cCC-----CeEEeCChhhhhccccccHHH--------------------H
Confidence 876654 1211 111 2344433 3343333333322 1
Q ss_pred ccccCCCCCCCCCE-EEEEee-ccC-CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc
Q 003987 561 DEHVGTLSDRSKPI-VFSMAR-LDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY 637 (781)
Q Consensus 561 ~~~~g~l~~~~k~i-Il~vGR-L~~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el 637 (781)
++.+|+ +.++++ .+..|+ -.+ .+....+++++.+++++.|+.++++--.... .+.+.....+.
T Consensus 179 r~~l~~--~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~------------~~~~~~~~~~~ 244 (381)
T COG0763 179 REKLGI--DADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAK------------YRRIIEEALKW 244 (381)
T ss_pred HHHhCC--CCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHH------------HHHHHHHHhhc
Confidence 245777 555555 444453 333 5566778899999998999999998776543 22333333222
Q ss_pred CC-CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC
Q 003987 638 KL-DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (781)
Q Consensus 638 gL-~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~ 696 (781)
.. ...+... .++-+..++ +||+.+..| |.+.+|+|.+|+|.|.+.
T Consensus 245 ~~~~~~~~~~--------~~~~~~a~~-~aD~al~aS-----GT~tLE~aL~g~P~Vv~Y 290 (381)
T COG0763 245 EVAGLSLILI--------DGEKRKAFA-AADAALAAS-----GTATLEAALAGTPMVVAY 290 (381)
T ss_pred cccCceEEec--------CchHHHHHH-HhhHHHHhc-----cHHHHHHHHhCCCEEEEE
Confidence 21 1223333 235566777 489877765 999999999999999873
No 130
>PRK14986 glycogen phosphorylase; Provisional
Probab=97.41 E-value=0.0032 Score=75.91 Aligned_cols=151 Identities=13% Similarity=0.121 Sum_probs=110.3
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHH-HHHH---HHHhhccC----CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003987 563 HVGTLSDRSKPIVFSMARLDHVKNMTG-LVEC---YGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~-LieA---~~~l~~~~----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 634 (781)
+.|+..+++...++++-|+..+|.... ++.. +.+++..- ....+++.|...+ .|..-...++.+.+++
T Consensus 534 ~~g~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIk~I~~va 609 (815)
T PRK14986 534 QLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAAS----AYYMAKHIIHLINDVA 609 (815)
T ss_pred HhCCccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCC----CcHHHHHHHHHHHHHH
Confidence 347766888889999999999999888 5444 55554431 1366666665543 3455566677777777
Q ss_pred H----HcCCCC--cEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003987 635 K----TYKLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (781)
Q Consensus 635 ~----elgL~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d 706 (781)
+ +-.+.+ +|.|+. .... .+.+.+-.++|+-.+-|. .|+.|..=+=||.-|.++++|-.|...|+.++
T Consensus 610 ~~in~Dp~v~~~lkVVFle----nY~v-slAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~ 684 (815)
T PRK14986 610 KVINNDPQIGDKLKVVFIP----NYSV-SLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEH 684 (815)
T ss_pred HHhccChhhcCceeEEEeC----CCCH-HHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHh
Confidence 6 222344 788886 3333 455555557999999875 89999999999999999999999999999986
Q ss_pred --CCeEEEECCCCHHHHHH
Q 003987 707 --GASGFHIDPYHPDQAAE 723 (781)
Q Consensus 707 --g~~G~lv~p~d~~~lA~ 723 (781)
++|||.|-. +.++..+
T Consensus 685 vG~eN~~~fG~-~~~ev~~ 702 (815)
T PRK14986 685 VGEENIFIFGN-TAEEVEA 702 (815)
T ss_pred cCCCcEEEeCC-CHHHHHH
Confidence 889999964 5555544
No 131
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.35 E-value=0.0033 Score=72.10 Aligned_cols=183 Identities=12% Similarity=0.108 Sum_probs=126.1
Q ss_pred cccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC-
Q 003987 562 EHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD- 640 (781)
Q Consensus 562 ~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~- 640 (781)
...|+ +++..++++.++ ..|-...++.-+.++.+.-|+..|++-|+|++ .+....+++++++.|+.
T Consensus 422 ~~lgl--p~~avVf~c~~n--~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~---------~~~~~~l~~la~~~Gv~~ 488 (620)
T COG3914 422 AQLGL--PEDAVVFCCFNN--YFKITPEVFALWMQILSAVPNSVLLLKAGGDD---------AEINARLRDLAEREGVDS 488 (620)
T ss_pred hhcCC--CCCeEEEEecCC--cccCCHHHHHHHHHHHHhCCCcEEEEecCCCc---------HHHHHHHHHHHHHcCCCh
Confidence 45888 555555555554 45556666666666777789999999999865 24567899999999984
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc-------Cccccccccc-cCCeEEE
Q 003987 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-------CHGGPAEIIE-HGASGFH 712 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT-------~~gG~~EiI~-dg~~G~l 712 (781)
.+++|.+ +.++++-...+. -+|+++=+--|-| +.|.+||+-+|+||++- +.|+. ++. -|..-++
T Consensus 489 eRL~f~p----~~~~~~h~a~~~-iADlvLDTyPY~g-~TTa~daLwm~vPVlT~~G~~FasR~~~s--i~~~agi~e~v 560 (620)
T COG3914 489 ERLRFLP----PAPNEDHRARYG-IADLVLDTYPYGG-HTTASDALWMGVPVLTRVGEQFASRNGAS--IATNAGIPELV 560 (620)
T ss_pred hheeecC----CCCCHHHHHhhc-hhheeeecccCCC-ccchHHHHHhcCceeeeccHHHHHhhhHH--HHHhcCCchhh
Confidence 6999998 666777777777 4999887755544 67899999999999874 33332 222 2444444
Q ss_pred ECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHh
Q 003987 713 IDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINV 771 (781)
Q Consensus 713 v~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~ 771 (781)
.+ +.++..++-..|- .|...+++.+..-.+.....==|+....++..|.++..
T Consensus 561 A~--s~~dYV~~av~~g----~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~ 613 (620)
T COG3914 561 AD--SRADYVEKAVAFG----SDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWG 613 (620)
T ss_pred cC--CHHHHHHHHHHhc----ccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHH
Confidence 44 6677766666654 78878888776555444332237666677767776654
No 132
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=97.26 E-value=0.1 Score=59.76 Aligned_cols=97 Identities=13% Similarity=0.160 Sum_probs=58.9
Q ss_pred HHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCc----ccccccccc
Q 003987 631 HELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEIIEH 706 (781)
Q Consensus 631 ~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~----gG~~EiI~d 706 (781)
+++.+.+.-..+++.+. +.....|+..+++. +|++|-.-+ -.++=|++.|+|+|+-.. -|..+-+
T Consensus 297 ~~l~~~~~~~~~~~vi~---~~~~~~e~~~iIs~-~dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~l-- 365 (426)
T PRK10017 297 LNLRQHVSDPARYHVVM---DELNDLEMGKILGA-CELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQL-- 365 (426)
T ss_pred HHHHHhcccccceeEec---CCCChHHHHHHHhh-CCEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHc--
Confidence 34444444344555543 12345688899995 998887643 367889999999999743 3444444
Q ss_pred CCeEEEECC--CCHHHHHHHHHHHHHhccCCHHHHHHH
Q 003987 707 GASGFHIDP--YHPDQAAELMADFFGKCKENPSHWKKI 742 (781)
Q Consensus 707 g~~G~lv~p--~d~~~lA~~I~~~l~~l~~dp~~~~~~ 742 (781)
|...++++. -+.+++.+++.+++ ++.+.+++.
T Consensus 366 g~~~~~~~~~~l~~~~Li~~v~~~~----~~r~~~~~~ 399 (426)
T PRK10017 366 GLPEMAIDIRHLLDGSLQAMVADTL----GQLPALNAR 399 (426)
T ss_pred CCccEEechhhCCHHHHHHHHHHHH----hCHHHHHHH
Confidence 223344443 35667888876666 666544443
No 133
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=97.17 E-value=0.0052 Score=61.30 Aligned_cols=111 Identities=20% Similarity=0.261 Sum_probs=63.1
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEE----EecCCcccCCCCChhhHhhhhccccchhhhhHHH
Q 003987 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCT----IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADL 469 (781)
Q Consensus 395 ~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~-gvp~v~----t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~ 469 (781)
.++..+++. +..||||++|...|..+ .++.-. ++|++. ..|+-...-.-+... -...+...+...+.....
T Consensus 55 ~a~~~L~~~-Gf~PDvI~~H~GWGe~L--flkdv~P~a~li~Y~E~~y~~~g~d~~FDpe~-p~~~~~~~~~r~rN~~~l 130 (171)
T PF12000_consen 55 RAARQLRAQ-GFVPDVIIAHPGWGETL--FLKDVFPDAPLIGYFEFYYRASGADVGFDPEF-PPSLDDRARLRMRNAHNL 130 (171)
T ss_pred HHHHHHHHc-CCCCCEEEEcCCcchhh--hHHHhCCCCcEEEEEEEEecCCCCcCCCCCCC-CCCHHHHHHHHHHhHHHH
Confidence 444555554 67899999999887332 333334 677663 222211110000000 011122223333444566
Q ss_pred HHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCC
Q 003987 470 IAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIY 533 (781)
Q Consensus 470 ~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f 533 (781)
..+..||..|+.|...+. +.|. .+.+|+.||+-|||++.+
T Consensus 131 ~~l~~~D~~isPT~wQ~~---------------~fP~---------~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 131 LALEQADAGISPTRWQRS---------------QFPA---------EFRSKISVIHDGIDTDRF 170 (171)
T ss_pred HHHHhCCcCcCCCHHHHH---------------hCCH---------HHHcCcEEeecccchhhc
Confidence 788999999999986644 1232 236799999999999765
No 134
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=97.16 E-value=0.0092 Score=72.11 Aligned_cols=150 Identities=14% Similarity=0.088 Sum_probs=107.4
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHH-H---HHHHHHhhccC----CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003987 563 HVGTLSDRSKPIVFSMARLDHVKNMTG-L---VECYGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~-L---ieA~~~l~~~~----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 634 (781)
..|+..+++...++++-|+..+|.... + ++-+.+++... ....+++.|...+ .|..-...++.+..++
T Consensus 521 ~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 596 (797)
T cd04300 521 TTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAP----GYYMAKLIIKLINAVA 596 (797)
T ss_pred HhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCC----CcHHHHHHHHHHHHHH
Confidence 456666889999999999999999888 4 45566665431 1255655555433 3444555666666666
Q ss_pred HHc----CCCC--cEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003987 635 KTY----KLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (781)
Q Consensus 635 ~el----gL~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d 706 (781)
+.. .+.+ +|.|+. .... .+.+.+-.++|+-.+-|. .|+.|..=+=+|.-|.++++|-.|...|+.++
T Consensus 597 ~~in~Dp~v~~~lkVVFle----nY~V-slAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~ 671 (797)
T cd04300 597 DVVNNDPDVGDKLKVVFLP----NYNV-SLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEE 671 (797)
T ss_pred HHhccChhcCCceEEEEeC----CCCh-HHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHH
Confidence 632 2344 688886 3333 445555557999999875 89999999999999999999999999999987
Q ss_pred --CCeEEEECCCCHHHHH
Q 003987 707 --GASGFHIDPYHPDQAA 722 (781)
Q Consensus 707 --g~~G~lv~p~d~~~lA 722 (781)
++|+|+|-. +.++..
T Consensus 672 vG~eN~fiFG~-~~~ev~ 688 (797)
T cd04300 672 VGEENIFIFGL-TAEEVE 688 (797)
T ss_pred hCcCcEEEeCC-CHHHHH
Confidence 889999964 455544
No 135
>PLN02208 glycosyltransferase family protein
Probab=97.15 E-value=0.46 Score=54.74 Aligned_cols=65 Identities=6% Similarity=0.037 Sum_probs=43.5
Q ss_pred HHHHHHHHcCCcEEEc----Ccccccccccc-CCeEEEECC-----CCHHHHHHHHHHHHHhccCCH-HHHHHHHHHHHH
Q 003987 680 LTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHIDP-----YHPDQAAELMADFFGKCKENP-SHWKKISDGGLK 748 (781)
Q Consensus 680 ltvlEAMa~GlPVVaT----~~gG~~EiI~d-g~~G~lv~p-----~d~~~lA~~I~~~l~~l~~dp-~~~~~~s~~a~~ 748 (781)
++++||+++|+|+|+- +....+..+.+ -+.|..++. -+.++++++|.+++ .++ +..+++.+++.+
T Consensus 340 nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m----~~~~e~g~~~r~~~~~ 415 (442)
T PLN02208 340 GTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVM----DKDSDLGKLVRSNHTK 415 (442)
T ss_pred hHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHh----cCCchhHHHHHHHHHH
Confidence 5899999999999996 33344454443 466877753 26778888888776 554 344555555543
No 136
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.14 E-value=0.018 Score=63.33 Aligned_cols=109 Identities=12% Similarity=0.128 Sum_probs=82.2
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCC---CCC---CcHHHHHHHHcCCcEEEcCccccccccccCCeEEEEC
Q 003987 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF---YEA---FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHID 714 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~---~E~---fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~ 714 (781)
+++..+|+.. +...+..++.. .++++.=++ .++ +.+-+.|+|+||.|.+++...+..-.+.+|+.=.+..
T Consensus 237 ~~~~yIg~~~---~~~~v~~~~~~-~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~~ 312 (373)
T COG4641 237 PNVQYIGYYN---PKDGVPNAFKR-DDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVYQ 312 (373)
T ss_pred chhhhhhccC---ccchhhhcccc-cceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEec
Confidence 4566666322 22556666663 666655432 222 3778999999999999998888888888887655554
Q ss_pred CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 715 PYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 715 p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
|..++.+++..++ ..++.++++.+.|.+++...|+.+..
T Consensus 313 --d~kdl~~~~~yll----~h~~erkeiae~~ye~V~~~ht~~~r 351 (373)
T COG4641 313 --DSKDLKEKLKYLL----NHPDERKEIAECAYERVLARHTYEER 351 (373)
T ss_pred --CHHHHHHHHHHHh----cCcchHHHHHHhhHHHHHHhccHHHH
Confidence 8999999998777 88999999999999999999988654
No 137
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.07 E-value=0.31 Score=54.31 Aligned_cols=256 Identities=15% Similarity=0.207 Sum_probs=150.1
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCH
Q 003987 405 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 483 (781)
Q Consensus 405 ~~kpDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 483 (781)
..+||+|..|.-.. .++++++|...++|++..-=++- ..+.+|.. .. .....-.-||.-++.|.
T Consensus 90 ~~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlR-----t~~~~~PE--E~--------NR~l~~~~S~~hfapte 154 (383)
T COG0381 90 EEKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLR-----TGDLYFPE--EI--------NRRLTSHLSDLHFAPTE 154 (383)
T ss_pred hhCCCEEEEeCCcchHHHHHHHHHHhCCceEEEecccc-----cCCCCCcH--HH--------HHHHHHHhhhhhcCChH
Confidence 34999999887554 56668999999999876533321 01111110 00 01123334666677777
Q ss_pred HHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCC-cCCCCCCCcHHHHHHhhhhcchhhhccCcccccc
Q 003987 484 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (781)
Q Consensus 484 ~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGv-D~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~ 562 (781)
...+.+. .-|++ ..++.|+-|-+ |.-.+.. .+ +.+ ......
T Consensus 155 ~ar~nLl--------------------~EG~~--~~~IfvtGnt~iDal~~~~-----~~-------~~~----~~~~~~ 196 (383)
T COG0381 155 IARKNLL--------------------REGVP--EKRIFVTGNTVIDALLNTR-----DR-------VLE----DSKILA 196 (383)
T ss_pred HHHHHHH--------------------HcCCC--ccceEEeCChHHHHHHHHH-----hh-------hcc----chhhHH
Confidence 6654221 12444 56788887743 2111100 00 000 000000
Q ss_pred ccCCCCCCC-CCEEEEEeeccCC-CChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH-HHcCC
Q 003987 563 HVGTLSDRS-KPIVFSMARLDHV-KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM-KTYKL 639 (781)
Q Consensus 563 ~~g~l~~~~-k~iIl~vGRL~~~-Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li-~elgL 639 (781)
.+ +.+.+ +.++++.=|-... +++..+++++.++.+.++++.++.--.-. ..+++.. +.++-
T Consensus 197 ~~--~~~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~--------------~~v~e~~~~~L~~ 260 (383)
T COG0381 197 KG--LDDKDKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPR--------------PRVRELVLKRLKN 260 (383)
T ss_pred hh--hccccCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCC--------------hhhhHHHHHHhCC
Confidence 00 11233 4455666555443 99999999999999888777665433322 2344444 55666
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-ccccccccccCCeEEEECCCCH
Q 003987 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGGPAEIIEHGASGFHIDPYHP 718 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~-~gG~~EiI~dg~~G~lv~p~d~ 718 (781)
.++|..+. ++...+...++.. | .+++.- .|-..=||-..|+||+.-+ .-.-+|.++.| +-.++. .|.
T Consensus 261 ~~~v~li~----pl~~~~f~~L~~~-a-~~iltD----SGgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lvg-~~~ 328 (383)
T COG0381 261 VERVKLID----PLGYLDFHNLMKN-A-FLILTD----SGGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILVG-TDE 328 (383)
T ss_pred CCcEEEeC----CcchHHHHHHHHh-c-eEEEec----CCchhhhHHhcCCcEEeeccCCCCccceecC-ceEEeC-ccH
Confidence 66799987 7778888888885 5 333331 2666779999999999975 44566766443 444554 477
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHH
Q 003987 719 DQAAELMADFFGKCKENPSHWKKISDG 745 (781)
Q Consensus 719 ~~lA~~I~~~l~~l~~dp~~~~~~s~~ 745 (781)
+.+.+++..++ ++++..++|+..
T Consensus 329 ~~i~~~~~~ll----~~~~~~~~m~~~ 351 (383)
T COG0381 329 ENILDAATELL----EDEEFYERMSNA 351 (383)
T ss_pred HHHHHHHHHHh----hChHHHHHHhcc
Confidence 88888887776 888888877653
No 138
>PLN03007 UDP-glucosyltransferase family protein
Probab=97.04 E-value=0.36 Score=56.26 Aligned_cols=78 Identities=10% Similarity=0.126 Sum_probs=46.0
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCc--EEEEcCCCCCCcHHHHHHHHcCCcEEEcC----cccccccccc-CCeEEE
Q 003987 640 DGQFRWIAAQTNRARNGELYRYIADTKG--AFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEH-GASGFH 712 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aad--vfV~PS~~E~fGltvlEAMa~GlPVVaT~----~gG~~EiI~d-g~~G~l 712 (781)
..+++..+ +++..++.. ..+ +||.=. | -++++||+++|+|+|+.. ..-.+..+.+ -..|+-
T Consensus 344 ~~g~~v~~----w~PQ~~iL~----h~~v~~fvtH~---G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~ 411 (482)
T PLN03007 344 GKGLIIRG----WAPQVLILD----HQATGGFVTHC---G-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVS 411 (482)
T ss_pred cCCEEEec----CCCHHHHhc----cCccceeeecC---c-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeE
Confidence 34677776 455555554 343 355532 2 358999999999999973 3333333221 123443
Q ss_pred EC----------CCCHHHHHHHHHHHH
Q 003987 713 ID----------PYHPDQAAELMADFF 729 (781)
Q Consensus 713 v~----------p~d~~~lA~~I~~~l 729 (781)
+. .-+.+++++++.+++
T Consensus 412 ~~~~~~~~~~~~~~~~~~l~~av~~~m 438 (482)
T PLN03007 412 VGAKKLVKVKGDFISREKVEKAVREVI 438 (482)
T ss_pred eccccccccccCcccHHHHHHHHHHHh
Confidence 31 136778888888776
No 139
>PLN02554 UDP-glycosyltransferase family protein
Probab=97.02 E-value=0.46 Score=55.38 Aligned_cols=88 Identities=16% Similarity=0.127 Sum_probs=51.8
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC----ccccc-cccccCCeEEEECC
Q 003987 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPA-EIIEHGASGFHIDP 715 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~----~gG~~-EiI~dg~~G~lv~p 715 (781)
+++.+.+ +++..++... . +.++||.= -| -.+++||+.+|+|+|+.. ....+ .+++.-+.|..++.
T Consensus 342 ~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH---~G-~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~ 411 (481)
T PLN02554 342 DIGKVIG----WAPQVAVLAK-P-AIGGFVTH---CG-WNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRK 411 (481)
T ss_pred cCceEEe----eCCHHHHhCC-c-ccCccccc---Cc-cchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeec
Confidence 4555556 4555555431 1 24445543 12 348999999999999963 33344 34555456776631
Q ss_pred -------------CCHHHHHHHHHHHHHhccCCHHHHHH
Q 003987 716 -------------YHPDQAAELMADFFGKCKENPSHWKK 741 (781)
Q Consensus 716 -------------~d~~~lA~~I~~~l~~l~~dp~~~~~ 741 (781)
-+.++++++|.+++. .+++++++
T Consensus 412 ~~~~~~~~~~~~~~~~e~l~~av~~vm~---~~~~~r~~ 447 (481)
T PLN02554 412 YWRGDLLAGEMETVTAEEIERGIRCLME---QDSDVRKR 447 (481)
T ss_pred cccccccccccCeEcHHHHHHHHHHHhc---CCHHHHHH
Confidence 267788888877762 25555544
No 140
>PLN02173 UDP-glucosyl transferase family protein
Probab=96.99 E-value=1.1 Score=51.77 Aligned_cols=92 Identities=13% Similarity=0.151 Sum_probs=57.2
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCc--EEEEcCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC-CeEEE
Q 003987 640 DGQFRWIAAQTNRARNGELYRYIADTKG--AFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFH 712 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aad--vfV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI~dg-~~G~l 712 (781)
.+++.+.+ +++-.++.. ... +||.= +=.++++||+++|+|+|+- +..-.+..+++. +.|.-
T Consensus 316 ~~~~~i~~----W~PQ~~iL~----H~~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~ 383 (449)
T PLN02173 316 KDKSLVLK----WSPQLQVLS----NKAIGCFMTH----CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVR 383 (449)
T ss_pred CCceEEeC----CCCHHHHhC----CCccceEEec----CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEE
Confidence 35677777 555555554 333 55543 2246999999999999996 344455566553 56766
Q ss_pred ECCC------CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Q 003987 713 IDPY------HPDQAAELMADFFGKCKENPSHWKKISDGGLK 748 (781)
Q Consensus 713 v~p~------d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~ 748 (781)
+... +.+++++++.+++ .+++ .+++.+++.+
T Consensus 384 v~~~~~~~~~~~e~v~~av~~vm----~~~~-~~~~r~~a~~ 420 (449)
T PLN02173 384 VKAEKESGIAKREEIEFSIKEVM----EGEK-SKEMKENAGK 420 (449)
T ss_pred EeecccCCcccHHHHHHHHHHHh----cCCh-HHHHHHHHHH
Confidence 6421 5788999998877 4543 2444444433
No 141
>PLN02562 UDP-glycosyltransferase
Probab=96.88 E-value=0.98 Score=52.17 Aligned_cols=140 Identities=12% Similarity=0.094 Sum_probs=80.7
Q ss_pred CCCEEEEEeecc---CCCChHHHHHHHHHhhccCCCeEEEE-EeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003987 571 SKPIVFSMARLD---HVKNMTGLVECYGKNSQLRELVNLVV-VAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (781)
Q Consensus 571 ~k~iIl~vGRL~---~~Kgl~~LieA~~~l~~~~~~v~LvI-VG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~fl 646 (781)
+..++++.|.+. ..+-+..++.+++++.. ++++ +..+.. + ...+... ++ +.+++...
T Consensus 273 ~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~-----~fiW~~~~~~~-------~--~l~~~~~---~~--~~~~~~v~ 333 (448)
T PLN02562 273 NSVIYISFGSWVSPIGESNVRTLALALEASGR-----PFIWVLNPVWR-------E--GLPPGYV---ER--VSKQGKVV 333 (448)
T ss_pred CceEEEEecccccCCCHHHHHHHHHHHHHCCC-----CEEEEEcCCch-------h--hCCHHHH---HH--hccCEEEE
Confidence 345778888864 34455666666665532 4443 432111 0 0000111 11 23567777
Q ss_pred ccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CCeEEEECCCCHHHH
Q 003987 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHIDPYHPDQA 721 (781)
Q Consensus 647 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI~d-g~~G~lv~p~d~~~l 721 (781)
+ +++..++... . +.++||.= -| -.+++||+.+|+|+|+. |....+..+.+ -+.|+-+..-+.+++
T Consensus 334 ~----w~PQ~~iL~h-~-~v~~fvtH---~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~l 403 (448)
T PLN02562 334 S----WAPQLEVLKH-Q-AVGCYLTH---CG-WNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKEV 403 (448)
T ss_pred e----cCCHHHHhCC-C-ccceEEec---Cc-chhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHHHH
Confidence 6 5566666552 1 13345543 12 35899999999999986 44455555554 356777755678899
Q ss_pred HHHHHHHHHhccCCHHHHHHHH
Q 003987 722 AELMADFFGKCKENPSHWKKIS 743 (781)
Q Consensus 722 A~~I~~~l~~l~~dp~~~~~~s 743 (781)
+++|.+++ .+++++++..
T Consensus 404 ~~~v~~~l----~~~~~r~~a~ 421 (448)
T PLN02562 404 EEGLRKVM----EDSGMGERLM 421 (448)
T ss_pred HHHHHHHh----CCHHHHHHHH
Confidence 99998877 6776655433
No 142
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=96.83 E-value=0.029 Score=67.14 Aligned_cols=144 Identities=16% Similarity=0.132 Sum_probs=109.5
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHHHH----HHHHHhh-ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc
Q 003987 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLV----ECYGKNS-QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY 637 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~Li----eA~~~l~-~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el 637 (781)
+.|+..+++...++++-|+.++|.....+ ..+..++ ...|.+.+++.|...+ .|..-.+.++.+...++..
T Consensus 478 ~~gi~~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP----~y~~aK~iIk~I~~~a~~i 553 (750)
T COG0058 478 RTGIEVDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHP----ADYAAKEIIKLINDVADVI 553 (750)
T ss_pred hcCCccCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCC----cchHHHHHHHHHHHHHHhh
Confidence 34555578899999999999999887654 3444444 3345566666665543 4556667778888888887
Q ss_pred CCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCccccccccc--cCCeEEEE
Q 003987 638 KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIE--HGASGFHI 713 (781)
Q Consensus 638 gL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~--dg~~G~lv 713 (781)
+...+|.|+. ..+. .+.+.+-.++||=.+-|. .|+.|..-+=||.-|.++|+|-.|...|+.+ ++.|||+|
T Consensus 554 n~~lkVvFl~----nYdv-slA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~f 628 (750)
T COG0058 554 NNKLKVVFLP----NYDV-SLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIF 628 (750)
T ss_pred cccceEEEeC----CCCh-hHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEe
Confidence 7667899996 3333 455555557999988775 7999999999999999999999999999997 89999999
Q ss_pred CC
Q 003987 714 DP 715 (781)
Q Consensus 714 ~p 715 (781)
-.
T Consensus 629 G~ 630 (750)
T COG0058 629 GE 630 (750)
T ss_pred CC
Confidence 54
No 143
>PLN02670 transferase, transferring glycosyl groups
Probab=96.77 E-value=1.1 Score=52.16 Aligned_cols=87 Identities=15% Similarity=0.098 Sum_probs=52.2
Q ss_pred HHHHHHHHcCCcEEEc----CccccccccccCCeEEEECC------CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 003987 680 LTVVEAMTCGLPTFAT----CHGGPAEIIEHGASGFHIDP------YHPDQAAELMADFFGKCKENPSHWKKISDGGLKR 749 (781)
Q Consensus 680 ltvlEAMa~GlPVVaT----~~gG~~EiI~dg~~G~lv~p------~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~ 749 (781)
++++||+++|+|+|+. +....+..++.-+.|..++. -+.++++++|.+++ .+++ -.++.+++++.
T Consensus 368 nS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~~e~i~~av~~vm----~~~~-g~~~r~~a~~l 442 (472)
T PLN02670 368 NSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTSDSVAESVRLAM----VDDA-GEEIRDKAKEM 442 (472)
T ss_pred chHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCcHHHHHHHHHHHh----cCcc-hHHHHHHHHHH
Confidence 5899999999999997 44445555666678888753 25788888888777 5541 12344444443
Q ss_pred HHHhcCcch-hhhccchHHHHHh
Q 003987 750 IYERLVVSS-DGIVDPSPFVINV 771 (781)
Q Consensus 750 ~~~~ysw~~-~~il~~ye~ll~~ 771 (781)
...--+-.. ..+++..++.+..
T Consensus 443 ~~~~~~~~~~~~~~~~~~~~l~~ 465 (472)
T PLN02670 443 RNLFGDMDRNNRYVDELVHYLRE 465 (472)
T ss_pred HHHHhCcchhHHHHHHHHHHHHH
Confidence 322112111 1455555555543
No 144
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=96.54 E-value=0.35 Score=52.45 Aligned_cols=171 Identities=9% Similarity=0.042 Sum_probs=113.4
Q ss_pred CCEEEEEee-ccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003987 572 KPIVFSMAR-LDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (781)
Q Consensus 572 k~iIl~vGR-L~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~ 650 (781)
.++.+-+|+ =|+..++..+++++.+... .++++++.=+.|. ...++++++.+..+++--.++++.+.
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~~--~~v~ii~PlsYp~-------gn~~Yi~~V~~~~~~lF~~~~~~~L~--- 212 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQFG--DNVKIIVPMGYPA-------NNQAYIEEVRQAGLALFGAENFQILT--- 212 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHhC--CCeEEEEECCcCC-------CCHHHHHHHHHHHHHhcCcccEEehh---
Confidence 345555666 4567788888888877643 5788877665543 12478888999998887657898887
Q ss_pred CcCChHHHHHHHHccCcEEEEcC-CCCCCcHHHHHHHHcCCcEEEc-CccccccccccCCeEEEECCCCHHHHHHHHHHH
Q 003987 651 NRARNGELYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYHPDQAAELMADF 728 (781)
Q Consensus 651 ~~v~~~el~~~la~aadvfV~PS-~~E~fGltvlEAMa~GlPVVaT-~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~ 728 (781)
+.++-+|...+++. +|+.++-- +.+|+|.. +=.+..|+||+.+ +..-..++.+.|..- +++.++ +-..+.
T Consensus 213 e~l~f~eYl~lL~~-~Dl~~f~~~RQQgiGnl-~lLi~~G~~v~l~r~n~fwqdl~e~gv~V-lf~~d~---L~~~~v-- 284 (322)
T PRK02797 213 EKLPFDDYLALLRQ-CDLGYFIFARQQGIGTL-CLLIQLGKPVVLSRDNPFWQDLTEQGLPV-LFTGDD---LDEDIV-- 284 (322)
T ss_pred hhCCHHHHHHHHHh-CCEEEEeechhhHHhHH-HHHHHCCCcEEEecCCchHHHHHhCCCeE-EecCCc---ccHHHH--
Confidence 47788999999995 99888764 67888854 4578999999998 566666666555433 343322 222211
Q ss_pred HHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHhcC
Q 003987 729 FGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINVIS 773 (781)
Q Consensus 729 l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~~~ 773 (781)
.+..+++....++.+. |+- ...++.|.+++..-+
T Consensus 285 -------~e~~rql~~~dk~~I~--Ff~--pn~~~~W~~~l~~~~ 318 (322)
T PRK02797 285 -------REAQRQLASVDKNIIA--FFS--PNYLQGWRNALAIAA 318 (322)
T ss_pred -------HHHHHHHHhhCcceee--ecC--HhHHHHHHHHHHHhh
Confidence 1223344444555553 544 567788888886543
No 145
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=96.39 E-value=0.014 Score=51.27 Aligned_cols=71 Identities=17% Similarity=0.076 Sum_probs=50.4
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcEEEEe
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQCTIA 437 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~--~lva~llar~~gvp~v~t~ 437 (781)
.+.+++.+|+... -.....|.+-....-+...+.+ ++.||||+|.+.+ .--+.+.|+.+|++.|+|-
T Consensus 14 ngLKVYYlP~~~~--------~~~~t~Pt~~~~~pl~R~Ilir---E~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfTD 82 (90)
T PF08288_consen 14 NGLKVYYLPLKVF--------YNQCTLPTLFGSFPLLRNILIR---ERIDIVHGHQAFSTLCHEAILHARTMGLKTVFTD 82 (90)
T ss_pred CCeEEEeecchhh--------hcCcchHHHHHhhHHHHHHHHH---cCeeEEEeehhhhHHHHHHHHHHHhCCCcEEeec
Confidence 4789999998863 2334455443333333333333 4899999999876 4568889999999999999
Q ss_pred cCCc
Q 003987 438 HALE 441 (781)
Q Consensus 438 H~l~ 441 (781)
|++.
T Consensus 83 HSLf 86 (90)
T PF08288_consen 83 HSLF 86 (90)
T ss_pred cccc
Confidence 9874
No 146
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=96.37 E-value=0.74 Score=50.64 Aligned_cols=133 Identities=15% Similarity=0.187 Sum_probs=75.6
Q ss_pred CCCEEEEEeeccCCCChHH---HHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003987 571 SKPIVFSMARLDHVKNMTG---LVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (781)
Q Consensus 571 ~k~iIl~vGRL~~~Kgl~~---LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG 647 (781)
+..+++++|. -.-|-+. .++|+..+....+ .-++|.|..-. .+..+++.....-.++|..+-
T Consensus 219 ~~~Ilvs~GG--G~dG~eLi~~~l~A~~~l~~l~~-~~~ivtGP~MP------------~~~r~~l~~~A~~~p~i~I~~ 283 (400)
T COG4671 219 GFDILVSVGG--GADGAELIETALAAAQLLAGLNH-KWLIVTGPFMP------------EAQRQKLLASAPKRPHISIFE 283 (400)
T ss_pred cceEEEecCC--ChhhHHHHHHHHHHhhhCCCCCc-ceEEEeCCCCC------------HHHHHHHHHhcccCCCeEEEE
Confidence 4556777774 2233332 2333333333222 23566666654 334444444444457888887
Q ss_pred cccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccc--ccc------cCCeEEEEC-CCCH
Q 003987 648 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE--IIE------HGASGFHID-PYHP 718 (781)
Q Consensus 648 ~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~E--iI~------dg~~G~lv~-p~d~ 718 (781)
+.. ++..+++. |+..|.=+-| +|+.|-+++|+|.+.-..+-+.| .|. -|-..++.+ .-.+
T Consensus 284 f~~------~~~~ll~g-A~~vVSm~GY----NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~ 352 (400)
T COG4671 284 FRN------DFESLLAG-ARLVVSMGGY----NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTP 352 (400)
T ss_pred hhh------hHHHHHHh-hheeeecccc----hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCCh
Confidence 544 57788885 8887765432 68999999999998875444333 221 133333332 2257
Q ss_pred HHHHHHHHHHH
Q 003987 719 DQAAELMADFF 729 (781)
Q Consensus 719 ~~lA~~I~~~l 729 (781)
+.+|++|...+
T Consensus 353 ~~La~al~~~l 363 (400)
T COG4671 353 QNLADALKAAL 363 (400)
T ss_pred HHHHHHHHhcc
Confidence 77888886655
No 147
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=96.30 E-value=0.12 Score=54.92 Aligned_cols=140 Identities=19% Similarity=0.271 Sum_probs=81.2
Q ss_pred CCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003987 571 SKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (781)
Q Consensus 571 ~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~ 650 (781)
.+.+++++|.=|+ ||++. +.++.+.+. ++++.||-+...| ....+++.++++ +++.++-
T Consensus 158 ~r~ilI~lGGsDp-k~lt~--kvl~~L~~~--~~nl~iV~gs~~p----------~l~~l~k~~~~~---~~i~~~~--- 216 (318)
T COG3980 158 KRDILITLGGSDP-KNLTL--KVLAELEQK--NVNLHIVVGSSNP----------TLKNLRKRAEKY---PNINLYI--- 216 (318)
T ss_pred hheEEEEccCCCh-hhhHH--HHHHHhhcc--CeeEEEEecCCCc----------chhHHHHHHhhC---CCeeeEe---
Confidence 3447788886554 66654 333334332 3676655443221 144555555554 7788875
Q ss_pred CcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCc--EEE--cCcccccccccc----CCeEEEECCCCHHHHH
Q 003987 651 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP--TFA--TCHGGPAEIIEH----GASGFHIDPYHPDQAA 722 (781)
Q Consensus 651 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP--VVa--T~~gG~~EiI~d----g~~G~lv~p~d~~~lA 722 (781)
...++.+++.+ +|+.+..+ |.|+.||...|+| |++ .+.-..+.-.+. -..|++. ...+..
T Consensus 217 ---~~~dma~LMke-~d~aI~Aa-----GstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~l---~~~~~~ 284 (318)
T COG3980 217 ---DTNDMAELMKE-ADLAISAA-----GSTLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYHL---KDLAKD 284 (318)
T ss_pred ---cchhHHHHHHh-cchheecc-----chHHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCCC---chHHHH
Confidence 24568888886 88777653 8999999999999 332 332222222211 2345553 234455
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHH
Q 003987 723 ELMADFFGKCKENPSHWKKISDGGL 747 (781)
Q Consensus 723 ~~I~~~l~~l~~dp~~~~~~s~~a~ 747 (781)
..+.++. .|+..+..++..+.
T Consensus 285 ~~~~~i~----~d~~~rk~l~~~~~ 305 (318)
T COG3980 285 YEILQIQ----KDYARRKNLSFGSK 305 (318)
T ss_pred HHHHHhh----hCHHHhhhhhhccc
Confidence 5554444 78888877766543
No 148
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=96.26 E-value=3.2 Score=47.97 Aligned_cols=92 Identities=12% Similarity=0.166 Sum_probs=57.0
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC-CeEEEEC-
Q 003987 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHID- 714 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI~dg-~~G~lv~- 714 (781)
++....+ +++..++... . +.++||.=. | -++++||+++|+|+|+. |....+..+.+. +.|+-+.
T Consensus 324 ~~g~v~~----w~PQ~~iL~h-~-~v~~fvtH~---G-~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~ 393 (451)
T PLN02410 324 GRGYIVK----WAPQKEVLSH-P-AVGGFWSHC---G-WNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEG 393 (451)
T ss_pred CCeEEEc----cCCHHHHhCC-C-ccCeeeecC---c-hhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCC
Confidence 5566666 5666666552 1 134466542 2 24899999999999996 444455555444 5777762
Q ss_pred CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 003987 715 PYHPDQAAELMADFFGKCKENPSHWKKISDGGL 747 (781)
Q Consensus 715 p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~ 747 (781)
.-+.++++++|.+++ .+++ .+++.++++
T Consensus 394 ~~~~~~v~~av~~lm----~~~~-~~~~r~~a~ 421 (451)
T PLN02410 394 DLDRGAVERAVKRLM----VEEE-GEEMRKRAI 421 (451)
T ss_pred cccHHHHHHHHHHHH----cCCc-HHHHHHHHH
Confidence 347788999998877 5543 334444443
No 149
>PLN02210 UDP-glucosyl transferase
Probab=96.25 E-value=3.3 Score=47.95 Aligned_cols=70 Identities=11% Similarity=0.204 Sum_probs=45.9
Q ss_pred cCChHHHHHHHHccCc--EEEEcCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CCeEEEECC------CCH
Q 003987 652 RARNGELYRYIADTKG--AFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHIDP------YHP 718 (781)
Q Consensus 652 ~v~~~el~~~la~aad--vfV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI~d-g~~G~lv~p------~d~ 718 (781)
+++..++.. .+. +||.=. |+ .+++||+++|+|+|+- +..-.+..+.+ -+.|..+.. -+.
T Consensus 331 w~PQ~~iL~----h~~vg~FitH~---G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~ 402 (456)
T PLN02210 331 WSPQEKILS----HMAISCFVTHC---GW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKV 402 (456)
T ss_pred cCCHHHHhc----CcCcCeEEeeC---Cc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCH
Confidence 455555554 243 565532 22 4899999999999996 34444555554 467877742 367
Q ss_pred HHHHHHHHHHH
Q 003987 719 DQAAELMADFF 729 (781)
Q Consensus 719 ~~lA~~I~~~l 729 (781)
+++++++.+++
T Consensus 403 ~~l~~av~~~m 413 (456)
T PLN02210 403 EEVERCIEAVT 413 (456)
T ss_pred HHHHHHHHHHh
Confidence 88889988776
No 150
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=96.20 E-value=0.45 Score=52.31 Aligned_cols=121 Identities=12% Similarity=0.058 Sum_probs=85.9
Q ss_pred CCEEEEEee-ccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003987 572 KPIVFSMAR-LDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (781)
Q Consensus 572 k~iIl~vGR-L~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~ 650 (781)
++.-+-+|+ =++..++-.+++++.+.. ..++++++-=+.+. ...++++++.+.++++--.+++..+.
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~--~~~~kIivPLsYg~-------~n~~Yi~~V~~~~~~lF~~~~~~iL~--- 251 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQF--GDDVKIIVPLSYGA-------NNQAYIQQVIQAGKELFGAENFQILT--- 251 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhc--CCCeEEEEECCCCC-------chHHHHHHHHHHHHHhcCccceeEhh---
Confidence 344445665 456777888888777643 35677766544432 12468888888888886567788775
Q ss_pred CcCChHHHHHHHHccCcEEEEcC-CCCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003987 651 NRARNGELYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (781)
Q Consensus 651 ~~v~~~el~~~la~aadvfV~PS-~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d 706 (781)
+.++-+|..++++. +|+.++.. +..|.|. ++=.+.+|+||+.+.....-....+
T Consensus 252 e~mpf~eYl~lL~~-cDl~if~~~RQQgiGn-I~lLl~~G~~v~L~~~np~~~~l~~ 306 (360)
T PF07429_consen 252 EFMPFDEYLALLSR-CDLGIFNHNRQQGIGN-ICLLLQLGKKVFLSRDNPFWQDLKE 306 (360)
T ss_pred hhCCHHHHHHHHHh-CCEEEEeechhhhHhH-HHHHHHcCCeEEEecCChHHHHHHh
Confidence 47889999999995 99999987 5788885 5558999999999965554444433
No 151
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=96.12 E-value=0.23 Score=60.10 Aligned_cols=292 Identities=14% Similarity=0.089 Sum_probs=166.9
Q ss_pred HHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHH
Q 003987 394 EDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAM 472 (781)
Q Consensus 394 ~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~-~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~ 472 (781)
......+.+.++ .-|+|-.|.....++.-.+..+ ..+.+-+..|+..+. +.++. -......-...+
T Consensus 128 ~~f~d~ive~~~-~~d~vwihdyhlmllp~~lr~~~~~~~ig~flhspfps----sEi~r--------~lp~r~eIl~gl 194 (732)
T KOG1050|consen 128 QAFADKIVEVYE-EGDIVWIHDYHLMLLPQMLRERFNSAKIGFFLHSPFPS----SEIYR--------CLPVRKEILRGL 194 (732)
T ss_pred HHHHHHHHHhcc-CCCcEEEEcchhhccchhhhcccccceEEEeccCCCCh----HHHHH--------hcccHHHHHHhh
Confidence 334445555555 6788888887765555444444 456666777764432 11111 111111122345
Q ss_pred hhCCEEEecCHHHHhhccccc-----cccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhh
Q 003987 473 NNADFIITSTYQEIAGTKNTV-----GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH 547 (781)
Q Consensus 473 ~~AD~IIt~S~~~~~~~k~~v-----~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~ 547 (781)
..+|.|=..+++.+.....+- -.+.+ .|...+ +.|.. ....+.++|-|+|...|............
T Consensus 195 l~~~~i~f~t~d~arhFls~c~R~l~~~~~s--~~~~~~----v~~rg-r~~~v~~~pigid~~r~v~~~~~~~~~~~-- 265 (732)
T KOG1050|consen 195 LYDDLLGFHTDDYARHFLSTCSRLLGLEVAS--KFPTAG----VSGRG-RDVSVKALPIGIDVQRFVKLLELPYVGSK-- 265 (732)
T ss_pred hccCccccccccHHHHHHHHHHHHHHhhhhc--cCCcce----EEecc-ceeeeeecccccchHHhhccccchhHHHH--
Confidence 555555444433222111000 00110 000111 11111 13356668888888766543221110000
Q ss_pred cchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCC----CeEEEEEeCcCCCCCCcchHH
Q 003987 548 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREE 623 (781)
Q Consensus 548 ~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee 623 (781)
. ..+.-+ ..++.+|+-+-|++..||+..=+.++.++...+| .+.++.+..+... ...+.
T Consensus 266 --~-----------~ei~~~-~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~---~~~~v 328 (732)
T KOG1050|consen 266 --G-----------MEIKEP-FKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRT---DGKEV 328 (732)
T ss_pred --H-----------HHHhhh-ccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcc---cchHH
Confidence 0 001111 2467889999999999999988888888766544 5677777766542 22222
Q ss_pred HHHHHHHHHHHHH----cCC--CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcC----CcEE
Q 003987 624 IAEIEKMHELMKT----YKL--DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCG----LPTF 693 (781)
Q Consensus 624 ~~~~~~l~~li~e----lgL--~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~G----lPVV 693 (781)
......+...+.+ .+- ...|+++- ..++..++.++++ .+|+.+..++.+|..++.+|+.+|. .+.|
T Consensus 329 ~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~---~~~~~~~l~a~~~-Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lV 404 (732)
T KOG1050|consen 329 EELKFCVSVHVRRINEKFGSASYQPVHSLL---KDLPFLELLALYK-VAEVCPVTSWRDGMNLVFLEYILCQENKKSVLV 404 (732)
T ss_pred HHHHHHhHhhhhhhhhccCCcccceEEEee---ccCCHHHHhhhHH-hhhheeecccccccchhhhHHHHhhcccCCceE
Confidence 2222333333322 221 12344433 3677889999999 5999999999999999999999984 7888
Q ss_pred EcCccccccccccCCeEEEECCCCHHHHHHHHHHHHH
Q 003987 694 ATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFG 730 (781)
Q Consensus 694 aT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~ 730 (781)
.+.+-|..+..+++ ..+++|.|.++++..|..++.
T Consensus 405 lsef~G~~~tl~d~--aivvnpw~~~~~~~~i~~al~ 439 (732)
T KOG1050|consen 405 LSEFIGDDTTLEDA--AIVVNPWDGDEFAILISKALT 439 (732)
T ss_pred Eeeecccccccccc--CEEECCcchHHHHHHHHHHhh
Confidence 88888888887543 678899999999999988874
No 152
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=96.08 E-value=0.015 Score=69.94 Aligned_cols=151 Identities=14% Similarity=0.050 Sum_probs=107.0
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHH-HHHH---HHHhhccC----CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003987 563 HVGTLSDRSKPIVFSMARLDHVKNMTG-LVEC---YGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~-LieA---~~~l~~~~----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 634 (781)
+.|+..+++...++++-|+..+|.... ++.. +.++++.- ....+++.|...+ .|..-...++.+.+++
T Consensus 520 ~~g~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 595 (798)
T PRK14985 520 RTGIEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAP----GYYLAKNIIFAINKVA 595 (798)
T ss_pred HhCCccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCC----CcHHHHHHHHHHHHHH
Confidence 346666888888999999999999888 5444 44554320 1256766665543 3445555666666666
Q ss_pred HHcC----CCC--cEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003987 635 KTYK----LDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (781)
Q Consensus 635 ~elg----L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d 706 (781)
+..+ +.+ +|.|+. .... .+.+.+-.++|+-.+-|. .|+.|..=+=+|.-|.++++|-.|...|+.++
T Consensus 596 ~~in~Dp~v~~~lkVVFle----nY~V-slAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~ 670 (798)
T PRK14985 596 EVINNDPLVGDKLKVVFLP----DYCV-SAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQ 670 (798)
T ss_pred HHhcCChhhCCceeEEEeC----CCCh-HHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHH
Confidence 5442 234 688886 3333 445555557999999875 89999999999999999999999999999876
Q ss_pred --CCeEEEECCCCHHHHHH
Q 003987 707 --GASGFHIDPYHPDQAAE 723 (781)
Q Consensus 707 --g~~G~lv~p~d~~~lA~ 723 (781)
++|||.|-. +.++..+
T Consensus 671 vG~eN~f~fG~-~~~ev~~ 688 (798)
T PRK14985 671 VGEENIFIFGH-TVEQVKA 688 (798)
T ss_pred hCcCcEEEeCC-CHHHHHH
Confidence 789999965 4554433
No 153
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=96.06 E-value=0.032 Score=67.37 Aligned_cols=151 Identities=15% Similarity=0.100 Sum_probs=106.8
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHH-HH---HHHHHhhccC----CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003987 563 HVGTLSDRSKPIVFSMARLDHVKNMTG-LV---ECYGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~-Li---eA~~~l~~~~----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 634 (781)
+.|+..+++...++++-|+..+|.... ++ +.+.+++..- ....+++.|...+ .|..-...++.+.+++
T Consensus 518 ~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 593 (794)
T TIGR02093 518 HTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAP----GYHMAKLIIKLINSVA 593 (794)
T ss_pred hcCCccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCC----CcHHHHHHHHHHHHHH
Confidence 456666888888999999999999888 44 4455554321 1346666665443 2444455566666666
Q ss_pred HHcC----CCC--cEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003987 635 KTYK----LDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (781)
Q Consensus 635 ~elg----L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d 706 (781)
+..+ +.+ +|.|+. .... .+.+.+-.++|+-.+-|. .|+.|..=+=+|.-|.++++|-.|...|+.++
T Consensus 594 ~~iN~Dp~v~~~lkVVFle----nY~V-slAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~ 668 (794)
T TIGR02093 594 EVVNNDPAVGDKLKVVFVP----NYNV-SLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREE 668 (794)
T ss_pred HHhccChhhCCceeEEEeC----CCCh-HHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHH
Confidence 4422 334 688886 3333 445555447999999875 89999999999999999999999999999987
Q ss_pred --CCeEEEECCCCHHHHHH
Q 003987 707 --GASGFHIDPYHPDQAAE 723 (781)
Q Consensus 707 --g~~G~lv~p~d~~~lA~ 723 (781)
++|+|+|-. +.++..+
T Consensus 669 vG~eN~fiFG~-~~~ev~~ 686 (794)
T TIGR02093 669 VGAENIFIFGL-TVEEVEA 686 (794)
T ss_pred hCcccEEEcCC-CHHHHHH
Confidence 889999964 5555443
No 154
>PLN00414 glycosyltransferase family protein
Probab=96.03 E-value=4.1 Score=47.06 Aligned_cols=89 Identities=6% Similarity=0.000 Sum_probs=55.6
Q ss_pred cCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----Cccccccccc-cCCeEEEECC-----CCHHHH
Q 003987 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIE-HGASGFHIDP-----YHPDQA 721 (781)
Q Consensus 652 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI~-dg~~G~lv~p-----~d~~~l 721 (781)
+++-.++... . +.++||.=. =-++++||+++|+|+|+. +..-.+..+. .-+.|..+.. -+.+++
T Consensus 319 w~PQ~~vL~h-~-~v~~fvtH~----G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i 392 (446)
T PLN00414 319 WVEQPLILSH-P-SVGCFVNHC----GFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESL 392 (446)
T ss_pred cCCHHHHhcC-C-ccceEEecC----chhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHH
Confidence 4555555542 1 125566542 246899999999999997 3334455553 4567877742 377888
Q ss_pred HHHHHHHHHhccCCH-HHHHHHHHHHHHHH
Q 003987 722 AELMADFFGKCKENP-SHWKKISDGGLKRI 750 (781)
Q Consensus 722 A~~I~~~l~~l~~dp-~~~~~~s~~a~~~~ 750 (781)
++++.+++ .++ +..+++.+++++.-
T Consensus 393 ~~~v~~~m----~~~~e~g~~~r~~a~~~~ 418 (446)
T PLN00414 393 RDTVKSVM----DKDSEIGNLVKRNHKKLK 418 (446)
T ss_pred HHHHHHHh----cCChhhHHHHHHHHHHHH
Confidence 88888776 443 45556666655443
No 155
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=95.73 E-value=5.7 Score=46.32 Aligned_cols=79 Identities=15% Similarity=0.130 Sum_probs=48.8
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CCeEEEECC
Q 003987 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHIDP 715 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI~d-g~~G~lv~p 715 (781)
.++++.+ +++..++... .+.++||.=. | -.+++||+++|+|+|+- +..-.+..+.+ -+.|.-+..
T Consensus 343 ~g~~v~~----w~PQ~~vL~h--~~v~~fvtH~---G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~ 412 (477)
T PLN02863 343 RGLVIRG----WAPQVAILSH--RAVGAFLTHC---G-WNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCE 412 (477)
T ss_pred CCEEecC----CCCHHHHhcC--CCcCeEEecC---C-chHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEecc
Confidence 4567666 4555555441 1245666542 2 35899999999999996 34444444433 367776632
Q ss_pred -----CCHHHHHHHHHHHH
Q 003987 716 -----YHPDQAAELMADFF 729 (781)
Q Consensus 716 -----~d~~~lA~~I~~~l 729 (781)
-+.+++++++.+++
T Consensus 413 ~~~~~~~~~~v~~~v~~~m 431 (477)
T PLN02863 413 GADTVPDSDELARVFMESV 431 (477)
T ss_pred CCCCCcCHHHHHHHHHHHh
Confidence 25678888887765
No 156
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=95.73 E-value=0.18 Score=56.09 Aligned_cols=91 Identities=16% Similarity=0.104 Sum_probs=57.1
Q ss_pred CEEEEEeecc-C-CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003987 573 PIVFSMARLD-H-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (781)
Q Consensus 573 ~iIl~vGRL~-~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~ 650 (781)
.+.+..|+-. + .+.+..+++++.++.+.. ..+++.|.. . .+.+++...+. ..+.+.+
T Consensus 169 ~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~--~~~~i~~a~-~------------~~~i~~~~~~~---~~~~~~~--- 227 (347)
T PRK14089 169 TIAFMPGSRKSEIKRLMPIFKELAKKLEGKE--KILVVPSFF-K------------GKDLKEIYGDI---SEFEISY--- 227 (347)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHhhcC--cEEEEeCCC-c------------HHHHHHHHhcC---CCcEEec---
Confidence 3445555432 2 355667778988887643 567776553 2 13344433332 2344543
Q ss_pred CcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC
Q 003987 651 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (781)
Q Consensus 651 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~ 696 (781)
+.+.+++ +||+.+..| |.+.+|++.+|+|.|..-
T Consensus 228 ------~~~~~m~-~aDlal~~S-----GT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 228 ------DTHKALL-EAEFAFICS-----GTATLEAALIGTPFVLAY 261 (347)
T ss_pred ------cHHHHHH-hhhHHHhcC-----cHHHHHHHHhCCCEEEEE
Confidence 2356777 499888876 888889999999999863
No 157
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=95.59 E-value=0.95 Score=49.71 Aligned_cols=109 Identities=16% Similarity=0.113 Sum_probs=65.5
Q ss_pred CCCCEEEEEeeccCCCCh-----HHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcE-
Q 003987 570 RSKPIVFSMARLDHVKNM-----TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF- 643 (781)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgl-----~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V- 643 (781)
+.+.+.+.+|.=...-.+ ..+++.+..+.+... ..++|..+-..| .+..+.|.+.. +-.+.+
T Consensus 145 ~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~vttSRRTp--------~~~~~~L~~~~---~~~~~~~ 212 (311)
T PF06258_consen 145 PRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GSLLVTTSRRTP--------PEAEAALRELL---KDNPGVY 212 (311)
T ss_pred CCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-CeEEEEcCCCCc--------HHHHHHHHHhh---cCCCceE
Confidence 344556677753332222 245666666655544 788888887653 12233333333 334567
Q ss_pred EEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc
Q 003987 644 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG 699 (781)
Q Consensus 644 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG 699 (781)
.|-+ . +..-+..+|+. +|.++.+.- .-.-+.||.++|+||..-...+
T Consensus 213 ~~~~--~---~~nPy~~~La~-ad~i~VT~D---SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 213 IWDG--T---GENPYLGFLAA-ADAIVVTED---SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred EecC--C---CCCcHHHHHHh-CCEEEEcCc---cHHHHHHHHHcCCCEEEecCCC
Confidence 5532 1 22346778884 999999853 2234789999999999987665
No 158
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=95.49 E-value=2.4 Score=45.00 Aligned_cols=112 Identities=10% Similarity=0.035 Sum_probs=65.7
Q ss_pred CCCCCEEEEEeeccCCCCh-----HHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHH-cCCCCc
Q 003987 569 DRSKPIVFSMARLDHVKNM-----TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT-YKLDGQ 642 (781)
Q Consensus 569 ~~~k~iIl~vGRL~~~Kgl-----~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~e-lgL~~~ 642 (781)
.+..++-+.+|.-.+.-.+ ..++.++-+..+. ....+++--+-.. .+..+..++. +.-..-
T Consensus 159 ~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~-~g~~~lisfSRRT------------p~~~~s~l~~~l~s~~~ 225 (329)
T COG3660 159 LPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILEN-QGGSFLISFSRRT------------PDTVKSILKNNLNSSPG 225 (329)
T ss_pred CCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHh-CCceEEEEeecCC------------cHHHHHHHHhccccCce
Confidence 3556677788865554443 2233333332221 3467777766554 2355566655 444456
Q ss_pred EEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccc
Q 003987 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP 700 (781)
Q Consensus 643 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~ 700 (781)
+.|-+.-++.- -...+++ ++|.++...-.- .-.-||.+.|+||++-.-.+.
T Consensus 226 i~w~~~d~g~N---PY~~~La-~Adyii~TaDSi---nM~sEAasTgkPv~~~~~~~~ 276 (329)
T COG3660 226 IVWNNEDTGYN---PYIDMLA-AADYIISTADSI---NMCSEAASTGKPVFILEPPNF 276 (329)
T ss_pred eEeCCCCCCCC---chHHHHh-hcceEEEecchh---hhhHHHhccCCCeEEEecCCc
Confidence 77776422222 3466777 599999986522 235799999999998754443
No 159
>PLN02555 limonoid glucosyltransferase
Probab=95.33 E-value=7.7 Score=45.26 Aligned_cols=95 Identities=13% Similarity=0.146 Sum_probs=57.6
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC-CeEEEEC
Q 003987 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHID 714 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI~dg-~~G~lv~ 714 (781)
.+++.+.+ +++..++... . +.++||.=. | -.+++||+.+|+|+|+. +.......+.+. +.|+-+.
T Consensus 336 ~~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH~---G-~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~ 405 (480)
T PLN02555 336 GDKGKIVQ----WCPQEKVLAH-P-SVACFVTHC---G-WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLC 405 (480)
T ss_pred CCceEEEe----cCCHHHHhCC-C-ccCeEEecC---C-cchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEcc
Confidence 45666666 5555555532 1 355666542 2 35899999999999997 344445555554 6777762
Q ss_pred -----C--CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 003987 715 -----P--YHPDQAAELMADFFGKCKENPSHWKKISDGGLKR 749 (781)
Q Consensus 715 -----p--~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~ 749 (781)
. -+.++++++|.+++ .+++ .++|.+++++.
T Consensus 406 ~~~~~~~~v~~~~v~~~v~~vm----~~~~-g~~~r~ra~~l 442 (480)
T PLN02555 406 RGEAENKLITREEVAECLLEAT----VGEK-AAELKQNALKW 442 (480)
T ss_pred CCccccCcCcHHHHHHHHHHHh----cCch-HHHHHHHHHHH
Confidence 1 25778888887776 4432 34455544443
No 160
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=95.19 E-value=3.4 Score=44.15 Aligned_cols=146 Identities=15% Similarity=0.055 Sum_probs=81.7
Q ss_pred CCCCCEE---EEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHH----------HHH
Q 003987 569 DRSKPIV---FSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHE----------LMK 635 (781)
Q Consensus 569 ~~~k~iI---l~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~----------li~ 635 (781)
+.++... .|+||....||...+++..++..+. +...-++-|-...+ +.+.-+.. .++
T Consensus 177 d~se~nmnv~~yigR~Tt~kG~~~mfD~h~~~lK~-~~~~t~~~GierS~---------A~~~i~d~~~~~~y~~~~~~~ 246 (355)
T PF11440_consen 177 DVSEKNMNVNRYIGRQTTWKGPRRMFDLHEKILKP-AGFKTIMEGIERSP---------AKISIKDHGIPYEYYPKLDCD 246 (355)
T ss_dssp -GGGSEEEEEEEE--SSGGG-HHHHHHHHHHTTTT-TT-EEEEE---SST---------HHHHHHHTT--EEEE-CTGGG
T ss_pred hhHhhhcccceeeeeeeeecCcHHHhhhHHHhcCC-cchhHHhhhhhcCC---------ceeeeecCCcccccCcccccc
Confidence 3344444 7999999999999999998886654 56777777754431 11111100 011
Q ss_pred HcCC--CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC------CCCCcHHHHHHHHcCC-cEEEcCcccccc----
Q 003987 636 TYKL--DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF------YEAFGLTVVEAMTCGL-PTFATCHGGPAE---- 702 (781)
Q Consensus 636 elgL--~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~------~E~fGltvlEAMa~Gl-PVVaT~~gG~~E---- 702 (781)
+..+ ..-+..+| +.-++|....++. +...++-+. .+..-.+-+|..|||+ ||+-+..|....
T Consensus 247 ~~~~~pN~~~~v~~----~Yi~~E~~~~Mak-s~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D 321 (355)
T PF11440_consen 247 EPKPAPNSPVPVYG----PYIRSEGLERMAK-SLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLD 321 (355)
T ss_dssp G---SSS--EEEES----S--HHHHHHHHHT-EEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTT
T ss_pred CcccCCCCcceecc----hhhhHHHHHHHhh-ccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeec
Confidence 1112 12366676 6667899999996 655555442 3557789999999995 777775554333
Q ss_pred ---ccccCCeEEEECCCCHHHHHHHHHHHH
Q 003987 703 ---IIEHGASGFHIDPYHPDQAAELMADFF 729 (781)
Q Consensus 703 ---iI~dg~~G~lv~p~d~~~lA~~I~~~l 729 (781)
.+.+..+.+.+|-.|.++..++|.++.
T Consensus 322 ~~~~~~~~~~~I~~De~dle~T~ekl~E~a 351 (355)
T PF11440_consen 322 GTRYIDHPYSAIYFDENDLESTVEKLIEVA 351 (355)
T ss_dssp SSBGGSS--S-EEE-TTSHHHHHHHHHHHH
T ss_pred CceeeccCcceeEeccchHHHHHHHHHHHh
Confidence 344455678899999999999997764
No 161
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=95.12 E-value=0.32 Score=58.42 Aligned_cols=150 Identities=13% Similarity=0.110 Sum_probs=95.0
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHHH----HHHHHHhhcc----CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003987 563 HVGTLSDRSKPIVFSMARLDHVKNMTGL----VECYGKNSQL----RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~L----ieA~~~l~~~----~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 634 (781)
..|+..+++...++++-|+..+|..... ++-+.++++. ...+.+++.|...+ .|..-++.++.+.+++
T Consensus 435 ~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP----~d~~gK~iIk~I~~va 510 (713)
T PF00343_consen 435 RTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHP----GDYMGKEIIKLINNVA 510 (713)
T ss_dssp HHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----T----T-HHHHHHHHHHHHHH
T ss_pred HhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCC----CcHHHHHHHHHHHHHH
Confidence 3455457778888999999999998883 4555565543 12367777776544 3455555666666666
Q ss_pred HHc----CCCC--cEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003987 635 KTY----KLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (781)
Q Consensus 635 ~el----gL~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d 706 (781)
+.. .+.+ +|.|+. ..+. .+.+.+-.++|+-.+.|. .|+.|..-+=||.-|.+.++|-.|...|+.+.
T Consensus 511 ~~in~Dp~v~~~lkVvFle----nYdv-slA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~ 585 (713)
T PF00343_consen 511 EVINNDPEVGDRLKVVFLE----NYDV-SLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEA 585 (713)
T ss_dssp HHHCT-TTTCCGEEEEEET----T-SH-HHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHH
T ss_pred HHHhcChhhccceeEEeec----CCcH-HHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHh
Confidence 532 3344 788986 3333 566666667999999875 89999999999999999999999999999864
Q ss_pred --CCeEEEECCCCHHHHH
Q 003987 707 --GASGFHIDPYHPDQAA 722 (781)
Q Consensus 707 --g~~G~lv~p~d~~~lA 722 (781)
.+++|++-. +.++..
T Consensus 586 vG~eN~fiFG~-~~~ev~ 602 (713)
T PF00343_consen 586 VGEENIFIFGL-TAEEVE 602 (713)
T ss_dssp H-GGGSEEES--BHHHHH
T ss_pred cCCCcEEEcCC-CHHHHH
Confidence 468899854 455543
No 162
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=94.99 E-value=9.7 Score=44.48 Aligned_cols=78 Identities=17% Similarity=0.173 Sum_probs=49.4
Q ss_pred cEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccc-ccCCeEEEECC-
Q 003987 642 QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEII-EHGASGFHIDP- 715 (781)
Q Consensus 642 ~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI-~dg~~G~lv~p- 715 (781)
.+.+.+ +++..++...-+ .+.||.= +=-++++||+.+|+|+|+. +....+..+ +.-+.|..++.
T Consensus 339 g~vv~~----W~PQ~~iL~h~~--vg~FitH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~ 408 (481)
T PLN02992 339 GFVVPS----WAPQAEILAHQA--VGGFLTH----CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDP 408 (481)
T ss_pred CEEEee----cCCHHHHhCCcc--cCeeEec----CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCC
Confidence 466666 455555554211 2235443 2235899999999999997 334445555 34556777743
Q ss_pred ---CCHHHHHHHHHHHH
Q 003987 716 ---YHPDQAAELMADFF 729 (781)
Q Consensus 716 ---~d~~~lA~~I~~~l 729 (781)
-+.++++++|.+++
T Consensus 409 ~~~~~~~~l~~av~~vm 425 (481)
T PLN02992 409 KEVISRSKIEALVRKVM 425 (481)
T ss_pred CCcccHHHHHHHHHHHh
Confidence 36788889898877
No 163
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=94.48 E-value=5.4 Score=43.43 Aligned_cols=57 Identities=14% Similarity=0.124 Sum_probs=38.8
Q ss_pred CcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcc---ccccccccCCeEEEECCCCHHHHHHHHHHHH
Q 003987 666 KGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG---GPAEIIEHGASGFHIDPYHPDQAAELMADFF 729 (781)
Q Consensus 666 advfV~PS~~E~fGltvlEAMa~GlPVVaT~~g---G~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l 729 (781)
|++++-- -|.-.-||...|+|.|.+.-| +..+... +.|.++..+|+.+..+...+.+
T Consensus 253 a~lvig~-----ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~~~s~~~~~~~~~a~~~l 312 (346)
T COG1817 253 ATLVIGA-----GGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLLYHSTDEIAIVEYAVRNL 312 (346)
T ss_pred hheeecC-----CchHHHHHHHhCCceEEecCCccccccHHHH--hcCceeecCCHHHHHHHHHHHh
Confidence 5555533 356678999999999998744 2333322 4688888888887777666555
No 164
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=93.37 E-value=17 Score=41.04 Aligned_cols=96 Identities=16% Similarity=0.221 Sum_probs=59.6
Q ss_pred HHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcc----cccccccc
Q 003987 631 HELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG----GPAEIIEH 706 (781)
Q Consensus 631 ~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~g----G~~EiI~d 706 (781)
+.++....-..+|.+.. +.. ..++...++. +|++|-.-+ -+++=||+.|+|+|+-.+. |..+-.
T Consensus 256 ~~ia~~~~~~~~i~~~~---d~~-~~~~~~~l~~-~dl~Vg~R~-----HsaI~al~~g~p~i~i~Y~~K~~~l~~~~-- 323 (385)
T COG2327 256 DAIAQLVLDSAEILVSS---DEY-AEELGGILAA-CDLIVGMRL-----HSAIMALAFGVPAIAIAYDPKVRGLMQDL-- 323 (385)
T ss_pred HHHHhhcCCccceEeec---chH-HHHHHHHhcc-CceEEeehh-----HHHHHHHhcCCCeEEEeecHHHHHHHHHc--
Confidence 33333333336677764 222 4667778884 888776543 4678899999999997533 333322
Q ss_pred CCeEEE--ECCCCHHHHHHHHHHHHHhccCCHHHHHH
Q 003987 707 GASGFH--IDPYHPDQAAELMADFFGKCKENPSHWKK 741 (781)
Q Consensus 707 g~~G~l--v~p~d~~~lA~~I~~~l~~l~~dp~~~~~ 741 (781)
|..|+. +.|.|.+.+.+...+.+. .+++.+++
T Consensus 324 gl~~~~~~i~~~~~~~l~~~~~e~~~---~~~~~~~~ 357 (385)
T COG2327 324 GLPGFAIDIDPLDAEILSAVVLERLT---KLDELRER 357 (385)
T ss_pred CCCcccccCCCCchHHHHHHHHHHHh---ccHHHHhh
Confidence 333444 467788888888887764 55555444
No 165
>PLN02764 glycosyltransferase family protein
Probab=93.04 E-value=21 Score=41.31 Aligned_cols=86 Identities=5% Similarity=0.012 Sum_probs=52.6
Q ss_pred cCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC----cccccccccc-CCeEEEECC-----CCHHHH
Q 003987 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEH-GASGFHIDP-----YHPDQA 721 (781)
Q Consensus 652 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~----~gG~~EiI~d-g~~G~lv~p-----~d~~~l 721 (781)
+++..++... . +.++||.=. =-.+++||+.+|+|+|+-. ....+..+.+ -+.|+.+.+ -+.+++
T Consensus 324 W~PQ~~vL~h-~-~v~~FvtH~----G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i 397 (453)
T PLN02764 324 WVQQPLILSH-P-SVGCFVSHC----GFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESL 397 (453)
T ss_pred CCCHHHHhcC-c-ccCeEEecC----CchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHH
Confidence 5555666552 1 145566542 2468999999999999973 3344555543 356766532 267888
Q ss_pred HHHHHHHHHhccCCH-HHHHHHHHHHH
Q 003987 722 AELMADFFGKCKENP-SHWKKISDGGL 747 (781)
Q Consensus 722 A~~I~~~l~~l~~dp-~~~~~~s~~a~ 747 (781)
++++.+++ .++ +..+++.++++
T Consensus 398 ~~av~~vm----~~~~~~g~~~r~~a~ 420 (453)
T PLN02764 398 RDAINSVM----KRDSEIGNLVKKNHT 420 (453)
T ss_pred HHHHHHHh----cCCchhHHHHHHHHH
Confidence 88888777 453 33444444444
No 166
>PLN00164 glucosyltransferase; Provisional
Probab=92.54 E-value=26 Score=40.97 Aligned_cols=50 Identities=10% Similarity=0.055 Sum_probs=35.4
Q ss_pred HHHHHHHHcCCcEEEc----Ccccccccc-ccCCeEEEECC-------CCHHHHHHHHHHHH
Q 003987 680 LTVVEAMTCGLPTFAT----CHGGPAEII-EHGASGFHIDP-------YHPDQAAELMADFF 729 (781)
Q Consensus 680 ltvlEAMa~GlPVVaT----~~gG~~EiI-~dg~~G~lv~p-------~d~~~lA~~I~~~l 729 (781)
.+++||+++|+|+|+- |..-.+..+ +.-+.|+.+.. -+.++++++|.+++
T Consensus 368 nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm 429 (480)
T PLN00164 368 NSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLM 429 (480)
T ss_pred chHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHh
Confidence 4899999999999996 444444444 33467877642 25688888888776
No 167
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=92.00 E-value=0.079 Score=52.14 Aligned_cols=91 Identities=16% Similarity=0.292 Sum_probs=56.6
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc--------cccccccCCeEEE
Q 003987 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG--------PAEIIEHGASGFH 712 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG--------~~EiI~dg~~G~l 712 (781)
.+|.+.++.. ++..+++. +|+.|.-+ =+.|+.|++++|+|.|.-...+ ....+.....|..
T Consensus 55 ~~v~~~~~~~------~m~~~m~~-aDlvIs~a----G~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~ 123 (167)
T PF04101_consen 55 PNVKVFGFVD------NMAELMAA-ADLVISHA----GAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIM 123 (167)
T ss_dssp CCCEEECSSS------SHHHHHHH-HSEEEECS-----CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCC
T ss_pred CcEEEEechh------hHHHHHHH-cCEEEeCC----CccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccc
Confidence 6799998544 36778885 99888853 2579999999999998865444 2233333334444
Q ss_pred ECCC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 003987 713 IDPY--HPDQAAELMADFFGKCKENPSHWKKISDGG 746 (781)
Q Consensus 713 v~p~--d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a 746 (781)
+... +++.+.++|.+++ .++.....+++++
T Consensus 124 ~~~~~~~~~~L~~~i~~l~----~~~~~~~~~~~~~ 155 (167)
T PF04101_consen 124 LDESELNPEELAEAIEELL----SDPEKLKEMAKAA 155 (167)
T ss_dssp SECCC-SCCCHHHHHHCHC----CCHH-SHHHCCCH
T ss_pred cCcccCCHHHHHHHHHHHH----cCcHHHHHHHHHH
Confidence 4322 3566788885554 8888767666554
No 168
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=91.12 E-value=1.4 Score=49.26 Aligned_cols=132 Identities=12% Similarity=0.169 Sum_probs=65.1
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCCh------HHH--HHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003987 563 HVGTLSDRSKPIVFSMARLDHVKNM------TGL--VECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl------~~L--ieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 634 (781)
.+|+ +.++.+|+|+=........ ... .+.+.. ...+++.|++-..-. +....
T Consensus 185 ~~~~--~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~li~k~Hp~----------------~~~~~ 244 (369)
T PF04464_consen 185 KLGI--DKDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNF--LLKNNYVLIIKPHPN----------------MKKKF 244 (369)
T ss_dssp HTT----SS-EEEEEE----GGG--GGSS----TT-HHHHHH--HHTTTEEEEE--SHH----------------HHTT-
T ss_pred Hhcc--CCCCcEEEEeeccccccccccccccccccCHHHHHH--HhCCCcEEEEEeCch----------------hhhch
Confidence 3565 5677799999655432222 111 222222 223577777655431 11111
Q ss_pred HH-cCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc--Cc-------ccccccc
Q 003987 635 KT-YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT--CH-------GGPAEII 704 (781)
Q Consensus 635 ~e-lgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT--~~-------gG~~EiI 704 (781)
.. ....++|.+... ..++..++.. +|++|.= ++-++.|++.+++|||.- |. |...+ .
T Consensus 245 ~~~~~~~~~i~~~~~------~~~~~~ll~~-aDiLITD-----ySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~-~ 311 (369)
T PF04464_consen 245 KDFKEDNSNIIFVSD------NEDIYDLLAA-ADILITD-----YSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFD-Y 311 (369)
T ss_dssp ---TT-TTTEEE-TT-------S-HHHHHHT--SEEEES-----S-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS--T
T ss_pred hhhhccCCcEEECCC------CCCHHHHHHh-cCEEEEe-----chhHHHHHHHhCCCEEEEeccHHHHhhccCCCCc-h
Confidence 11 344577888751 2368888885 9998875 567999999999999964 32 22222 2
Q ss_pred ccCCeEEEECCCCHHHHHHHHHHHH
Q 003987 705 EHGASGFHIDPYHPDQAAELMADFF 729 (781)
Q Consensus 705 ~dg~~G~lv~p~d~~~lA~~I~~~l 729 (781)
.+..-|-.+. +.+++.++|..++
T Consensus 312 ~~~~pg~~~~--~~~eL~~~i~~~~ 334 (369)
T PF04464_consen 312 EEDLPGPIVY--NFEELIEAIENII 334 (369)
T ss_dssp TTSSSS-EES--SHHHHHHHHTTHH
T ss_pred HhhCCCceeC--CHHHHHHHHHhhh
Confidence 2333455554 8999999997766
No 169
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=89.92 E-value=1.5 Score=50.95 Aligned_cols=132 Identities=14% Similarity=0.117 Sum_probs=74.2
Q ss_pred CCCEEEEEeeccCCCCh----HHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003987 571 SKPIVFSMARLDHVKNM----TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (781)
Q Consensus 571 ~k~iIl~vGRL~~~Kgl----~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~fl 646 (781)
++.++++.|.+.. ... ..++++++++ |. ++++.-++.. . -.+++++...
T Consensus 276 ~~vv~vsfGs~~~-~~~~~~~~~~~~~~~~~----~~-~~iW~~~~~~------------~---------~~l~~n~~~~ 328 (500)
T PF00201_consen 276 KGVVYVSFGSIVS-SMPEEKLKEIAEAFENL----PQ-RFIWKYEGEP------------P---------ENLPKNVLIV 328 (500)
T ss_dssp TEEEEEE-TSSST-T-HHHHHHHHHHHHHCS----TT-EEEEEETCSH------------G---------CHHHTTEEEE
T ss_pred CCEEEEecCcccc-hhHHHHHHHHHHHHhhC----CC-cccccccccc------------c---------ccccceEEEe
Confidence 4456788898753 222 3345555444 44 5665555422 0 0123567777
Q ss_pred ccccCcCChHHHHHHHHc-cCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccCCeEEEECCC--CHH
Q 003987 647 AAQTNRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHGASGFHIDPY--HPD 719 (781)
Q Consensus 647 G~~~~~v~~~el~~~la~-aadvfV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI~dg~~G~lv~p~--d~~ 719 (781)
. ++|-.++. +. ..++||.= |=-.++.||+.+|+|+|+- |....+..+++.+.|..++.. +.+
T Consensus 329 ~----W~PQ~~lL---~hp~v~~fitH----gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~ 397 (500)
T PF00201_consen 329 K----WLPQNDLL---AHPRVKLFITH----GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEE 397 (500)
T ss_dssp S----S--HHHHH---TSTTEEEEEES------HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHH
T ss_pred c----cccchhhh---hcccceeeeec----cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHH
Confidence 6 55555554 32 13445542 2245899999999999997 334455566666678888654 567
Q ss_pred HHHHHHHHHHHhccCCHHHHHHHHH
Q 003987 720 QAAELMADFFGKCKENPSHWKKISD 744 (781)
Q Consensus 720 ~lA~~I~~~l~~l~~dp~~~~~~s~ 744 (781)
++.++|.+++ +|+.+++...+
T Consensus 398 ~l~~ai~~vl----~~~~y~~~a~~ 418 (500)
T PF00201_consen 398 ELRAAIREVL----ENPSYKENAKR 418 (500)
T ss_dssp HHHHHHHHHH----HSHHHHHHHHH
T ss_pred HHHHHHHHHH----hhhHHHHHHHH
Confidence 7888887777 78876655433
No 170
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=89.48 E-value=27 Score=37.21 Aligned_cols=125 Identities=14% Similarity=0.132 Sum_probs=70.7
Q ss_pred CCCCCEEEEEeeccCC-------CChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc-CCC
Q 003987 569 DRSKPIVFSMARLDHV-------KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY-KLD 640 (781)
Q Consensus 569 ~~~k~iIl~vGRL~~~-------Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el-gL~ 640 (781)
..++++|++....... .+...+++.+..+.+..|+++++|-= .|......+ . ...++. +.
T Consensus 114 ~~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~-HP~~~~~~~------~----~~~~~~~~~- 181 (269)
T PF05159_consen 114 SKNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKP-HPDERGGNK------Y----SYLEELPNL- 181 (269)
T ss_pred cCCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEE-CchhhCCCC------h----hHhhhhhcC-
Confidence 5678888888877654 23455666666666666788876544 342111111 0 222222 33
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHH
Q 003987 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 720 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~ 720 (781)
.++.++.. ...++.++.. +|.++.-+ +.+-+||+.+|+||++-...- . ...|+..+....+.
T Consensus 182 ~~~~~~~~------~~~~~~Ll~~-s~~Vvtin-----StvGlEAll~gkpVi~~G~~~---Y---~~~glt~~~~~~~~ 243 (269)
T PF05159_consen 182 PNVVIIDD------DVNLYELLEQ-SDAVVTIN-----STVGLEALLHGKPVIVFGRAF---Y---AGWGLTDDRKLDEF 243 (269)
T ss_pred CCeEEECC------CCCHHHHHHh-CCEEEEEC-----CHHHHHHHHcCCceEEecCcc---c---CCCCccCcCCchhh
Confidence 34555431 2245677775 77655542 578999999999999963221 1 13466665544444
Q ss_pred HHH
Q 003987 721 AAE 723 (781)
Q Consensus 721 lA~ 723 (781)
+..
T Consensus 244 ~~~ 246 (269)
T PF05159_consen 244 WRA 246 (269)
T ss_pred hhc
Confidence 333
No 171
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=89.01 E-value=2.5 Score=45.15 Aligned_cols=99 Identities=16% Similarity=0.102 Sum_probs=62.7
Q ss_pred EEEEEeeccCCCCh--HHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccC
Q 003987 574 IVFSMARLDHVKNM--TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (781)
Q Consensus 574 iIl~vGRL~~~Kgl--~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~ 651 (781)
+++..|.-...|.+ +...+.+..+.+. +++++++|+..+ .+..+++.+..+....+.+.|
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~--~~~ivl~g~~~e------------~~~~~~i~~~~~~~~~~~~~~---- 185 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLAR--GARVVLTGGPAE------------RELAEEIAAALGGPRVVNLAG---- 185 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEechhh------------HHHHHHHHHhcCCCccccCcC----
Confidence 34444443444443 4666666666654 689999987543 334444455443223344566
Q ss_pred cCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC
Q 003987 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (781)
Q Consensus 652 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~ 696 (781)
..+-.|+..+++. +|++|.+.. | ++--|.+.|+|+|+--
T Consensus 186 ~~~l~e~~~li~~-~~l~I~~Ds----g-~~HlA~a~~~p~i~l~ 224 (279)
T cd03789 186 KTSLRELAALLAR-ADLVVTNDS----G-PMHLAAALGTPTVALF 224 (279)
T ss_pred CCCHHHHHHHHHh-CCEEEeeCC----H-HHHHHHHcCCCEEEEE
Confidence 5567899999996 999999842 3 4444569999999863
No 172
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=88.91 E-value=3.7 Score=45.51 Aligned_cols=180 Identities=13% Similarity=0.170 Sum_probs=122.7
Q ss_pred ccCCCC-CCCCCEEEEEeeccCCCChHHHHHHHHHhhccCC-CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC-
Q 003987 563 HVGTLS-DRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE-LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL- 639 (781)
Q Consensus 563 ~~g~l~-~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~-~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL- 639 (781)
++|... .+.+.+-++=-++.-.|+-..=+-+..+.-+..| .+..+.|.....- .+-..+..++..+.+
T Consensus 180 ~FGY~p~~~~~RvavfEPNi~vvK~~~~PmLi~E~aYR~~P~~v~~~~V~Nt~~~---------ke~~~F~~f~~~ldlv 250 (364)
T PF10933_consen 180 RFGYQPGRPGKRVAVFEPNISVVKTCFIPMLICEEAYRADPDAVEHVYVTNTYHL---------KEHPTFVNFANSLDLV 250 (364)
T ss_pred ccccccCCCCceEEEecCCceEEeecCccHHHHHHHHHhChhhcceEEEecchhh---------hcCHHHHHHHHhhHHh
Confidence 355533 2344455555667777774432222222222223 3556666655431 123455666666655
Q ss_pred -CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCH
Q 003987 640 -DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP 718 (781)
Q Consensus 640 -~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~ 718 (781)
++...|-| +. +++.++++..|++|.=.+.-+.-...+||+--|=|.|-.. ..+. +.|+..+-.|.
T Consensus 251 r~gkasfeg----R~---~~p~fla~~tD~VvSHqWeN~lNYlY~daLyggYPLVHNS-----~~l~--d~GYYY~~fD~ 316 (364)
T PF10933_consen 251 RDGKASFEG----RF---DFPDFLAQHTDAVVSHQWENPLNYLYYDALYGGYPLVHNS-----PLLK--DVGYYYPDFDA 316 (364)
T ss_pred hcCeeEEee----ec---ChHHHHHhCCCEEEeccccchhhHHHHHHHhcCCCcccCc-----chhc--ccCcCCCCccH
Confidence 57788988 33 4678888889999988887788888999999999998752 3443 37999999999
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 719 ~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
.+=++++.+.+. +....++...+++++.+ ..++-...+-++.|++.|
T Consensus 317 ~~G~r~L~~A~~---~HD~~~~~Y~~ra~~~l-~~~~p~n~~nv~~y~~~L 363 (364)
T PF10933_consen 317 FEGARQLLRAIR---EHDADLDAYRARARRLL-DRLSPENPANVRAYEARL 363 (364)
T ss_pred HHHHHHHHHHHH---HccccHHHHHHHHHHHH-HhhCCCCHHHHHHHHHhh
Confidence 999999998875 66677888888888777 778888888888998875
No 173
>PLN03015 UDP-glucosyl transferase
Probab=88.71 E-value=54 Score=38.22 Aligned_cols=50 Identities=20% Similarity=0.220 Sum_probs=32.8
Q ss_pred HHHHHHHHcCCcEEEcC----cccccccc-ccCCeEEEEC------CCCHHHHHHHHHHHH
Q 003987 680 LTVVEAMTCGLPTFATC----HGGPAEII-EHGASGFHID------PYHPDQAAELMADFF 729 (781)
Q Consensus 680 ltvlEAMa~GlPVVaT~----~gG~~EiI-~dg~~G~lv~------p~d~~~lA~~I~~~l 729 (781)
++++||+++|+|+|+-. ..-.+..+ +.-+.|.-+. .-..++++++|.+++
T Consensus 364 nS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm 424 (470)
T PLN03015 364 SSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIV 424 (470)
T ss_pred hhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHH
Confidence 58999999999999973 33333333 3335566553 125667777777766
No 174
>PLN03004 UDP-glycosyltransferase
Probab=87.55 E-value=7.8 Score=44.85 Aligned_cols=85 Identities=12% Similarity=0.074 Sum_probs=55.4
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcE--EEEcCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CCeEEEE
Q 003987 641 GQFRWIAAQTNRARNGELYRYIADTKGA--FVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHI 713 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadv--fV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI~d-g~~G~lv 713 (781)
.++.+.+ +++-.++.. ..++ ||.= +=-++++||+++|+|+|+. +....+..+.+ -+.|..+
T Consensus 334 ~g~~v~~----W~PQ~~iL~----H~~v~~FvTH----~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l 401 (451)
T PLN03004 334 KGMVVKS----WAPQVPVLN----HKAVGGFVTH----CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISM 401 (451)
T ss_pred CcEEEEe----eCCHHHHhC----CCccceEecc----CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEe
Confidence 4566666 445555544 4665 4432 1235899999999999996 45555555644 3678877
Q ss_pred CC-----CCHHHHHHHHHHHHHhccCCHHHHHH
Q 003987 714 DP-----YHPDQAAELMADFFGKCKENPSHWKK 741 (781)
Q Consensus 714 ~p-----~d~~~lA~~I~~~l~~l~~dp~~~~~ 741 (781)
+. -+.++++++|.+++ .+++++++
T Consensus 402 ~~~~~~~~~~e~l~~av~~vm----~~~~~r~~ 430 (451)
T PLN03004 402 NESETGFVSSTEVEKRVQEII----GECPVRER 430 (451)
T ss_pred cCCcCCccCHHHHHHHHHHHh----cCHHHHHH
Confidence 53 26788888888777 67655544
No 175
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=85.17 E-value=7.6 Score=43.12 Aligned_cols=103 Identities=11% Similarity=0.044 Sum_probs=64.7
Q ss_pred CCCEEEEEeeccCCCChH--HHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003987 571 SKPIVFSMARLDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (781)
Q Consensus 571 ~k~iIl~vGRL~~~Kgl~--~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~ 648 (781)
++.+++..|.-.+.|... ...+.+..+.+ .+.+++++|+..+ ++.+...++++.......+.+.|
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~--~~~~vvl~ggp~e----------~e~~~~~~i~~~~~~~~~~~l~g- 249 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA--RGYEVVLTSGPDK----------DDLACVNEIAQGCQTPPVTALAG- 249 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEcCCCh----------HHHHHHHHHHHhcCCCccccccC-
Confidence 345566777655667654 55666666543 2578888876533 11222334443332223355667
Q ss_pred ccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc
Q 003987 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (781)
Q Consensus 649 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT 695 (781)
..+-.++..+++. ++++|..-. -.+-=|-|.|+|||+=
T Consensus 250 ---~~sL~el~ali~~-a~l~v~nDS-----Gp~HlAaA~g~P~v~l 287 (352)
T PRK10422 250 ---KTTFPELGALIDH-AQLFIGVDS-----APAHIAAAVNTPLICL 287 (352)
T ss_pred ---CCCHHHHHHHHHh-CCEEEecCC-----HHHHHHHHcCCCEEEE
Confidence 6678999999996 999998742 3455577899999985
No 176
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=84.11 E-value=3.2 Score=48.11 Aligned_cols=100 Identities=11% Similarity=-0.045 Sum_probs=64.1
Q ss_pred HHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcc
Q 003987 470 IAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGS 549 (781)
Q Consensus 470 ~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~ 549 (781)
.....+|.+++.++..+...+.++. .++ ..++.+.++++|.+.+.+.-......
T Consensus 205 e~~~~~~~~~~ns~~~~~~f~~~~~------------------~L~--~~d~~~~y~ei~~s~~~~~~~~~~~~------ 258 (495)
T KOG0853|consen 205 ETTGLAWKILVNSYFTKRQFKATFV------------------SLS--NSDITSTYPEIDGSWFTYGQYESHLE------ 258 (495)
T ss_pred hhhhccceEecchhhhhhhhhhhhh------------------hcC--CCCcceeeccccchhccccccccchh------
Confidence 3566799999999877664333321 122 44588999999988776521111100
Q ss_pred hhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCC
Q 003987 550 IEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL 603 (781)
Q Consensus 550 i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~ 603 (781)
-....+...|+ ...+..+..+-|+.+.||++.+++++..+....++
T Consensus 259 ------~~~~~r~~~~v--~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~ 304 (495)
T KOG0853|consen 259 ------LRLPVRLYRGV--SGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPE 304 (495)
T ss_pred ------cccccceeeee--cccceEeeeeeecCCCCCceeehhhHHhhhcccCC
Confidence 01112223444 34467788999999999999999999988765544
No 177
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=83.63 E-value=8.2 Score=40.19 Aligned_cols=103 Identities=15% Similarity=0.076 Sum_probs=60.2
Q ss_pred CCCCEEEEEeeccCCCChHH--HHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003987 570 RSKPIVFSMARLDHVKNMTG--LVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (781)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgl~~--LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG 647 (781)
+++.+++..|.=.+.|.+.. ..+.+..+.+.. ++++++|+..+ .+.+....+.+... ...+.+.|
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~--~~vvl~g~~~~----------~~~~~~~~~~~~~~-~~~~~~~~ 170 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERG--YRVVLLGGPEE----------QEKEIADQIAAGLQ-NPVINLAG 170 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT---EEEE--SSHH----------HHHHHHHHHHTTHT-TTTEEETT
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhC--ceEEEEccchH----------HHHHHHHHHHHhcc-cceEeecC
Confidence 34456677777667777655 677777776643 78888888743 11222233333221 12577777
Q ss_pred cccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc
Q 003987 648 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (781)
Q Consensus 648 ~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT 695 (781)
..+-.++..+++. +|++|.+- .-.+-=|.|.|+|+|+=
T Consensus 171 ----~~~l~e~~ali~~-a~~~I~~D-----tg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 171 ----KTSLRELAALISR-ADLVIGND-----TGPMHLAAALGTPTVAL 208 (247)
T ss_dssp ----TS-HHHHHHHHHT-SSEEEEES-----SHHHHHHHHTT--EEEE
T ss_pred ----CCCHHHHHHHHhc-CCEEEecC-----ChHHHHHHHHhCCEEEE
Confidence 5678899999995 99999983 24566688999999996
No 178
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=82.85 E-value=12 Score=41.16 Aligned_cols=100 Identities=16% Similarity=0.042 Sum_probs=62.9
Q ss_pred CCCE-EEEEee-ccCCCChH--HHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003987 571 SKPI-VFSMAR-LDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (781)
Q Consensus 571 ~k~i-Il~vGR-L~~~Kgl~--~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~fl 646 (781)
++++ ++..|. ..+.|.+. ...+.+..+.+. +.+++++|+..+ .+...++.+..+ ...+.+.
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~--~~~ivl~G~~~e------------~~~~~~i~~~~~-~~~~~l~ 237 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQ--GYQVVLFGSAKD------------HPAGNEIEALLP-GELRNLA 237 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHC--CCEEEEEEChhh------------HHHHHHHHHhCC-cccccCC
Confidence 3444 455554 34667665 566666666542 478888887643 233333333322 1223356
Q ss_pred ccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc
Q 003987 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (781)
Q Consensus 647 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT 695 (781)
| ..+-.++..+++. +|++|..-. -.+-=|-|.|+|+|+=
T Consensus 238 g----~~sL~el~ali~~-a~l~I~~DS-----Gp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 238 G----ETSLDEAVDLIAL-AKAVVTNDS-----GLMHVAAALNRPLVAL 276 (334)
T ss_pred C----CCCHHHHHHHHHh-CCEEEeeCC-----HHHHHHHHcCCCEEEE
Confidence 6 6678999999996 999998842 3455677999999984
No 179
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=80.59 E-value=19 Score=35.94 Aligned_cols=63 Identities=21% Similarity=0.129 Sum_probs=42.9
Q ss_pred CCceEEEEcCCCchHHHHHHHHHc------CCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEE
Q 003987 406 GFPDFIIGNYSDGNLVASLLAYKM------GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFII 479 (781)
Q Consensus 406 ~kpDIIh~~~~~~~lva~llar~~------gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~II 479 (781)
.+||+|++|.+.......++++.+ |.++|++=- ....+ ... ..-++++.-||..+
T Consensus 91 ~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES-~aRv~--~lS----------------lTGklly~~aD~f~ 151 (170)
T PF08660_consen 91 ERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIES-FARVK--TLS----------------LTGKLLYPFADRFI 151 (170)
T ss_pred hCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEe-eeecC--CCc----------------hHHHHHHHhCCEEE
Confidence 389999999999988888888888 888887521 11100 000 11234566799999
Q ss_pred ecCHHHHh
Q 003987 480 TSTYQEIA 487 (781)
Q Consensus 480 t~S~~~~~ 487 (781)
+.-++.++
T Consensus 152 VQW~~l~~ 159 (170)
T PF08660_consen 152 VQWEELAE 159 (170)
T ss_pred EcCHHHHh
Confidence 98887655
No 180
>PLN02167 UDP-glycosyltransferase family protein
Probab=80.20 E-value=12 Score=43.48 Aligned_cols=79 Identities=16% Similarity=0.157 Sum_probs=48.1
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC----cccccc-ccccCCeEEEECC
Q 003987 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAE-IIEHGASGFHIDP 715 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~----~gG~~E-iI~dg~~G~lv~p 715 (781)
++..+.+ +++..++...= +.++||.=. |+ .+++||+++|+|+|+-. ..-.+. +++.-+.|..+..
T Consensus 340 ~rg~v~~----w~PQ~~iL~h~--~vg~fvtH~---G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~ 409 (475)
T PLN02167 340 GRGLVCG----WAPQVEILAHK--AIGGFVSHC---GW-NSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRL 409 (475)
T ss_pred cCeeeec----cCCHHHHhcCc--ccCeEEeeC---Cc-ccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeec
Confidence 3445555 55555555421 144566542 22 48999999999999963 333332 3444456877642
Q ss_pred ---------CCHHHHHHHHHHHH
Q 003987 716 ---------YHPDQAAELMADFF 729 (781)
Q Consensus 716 ---------~d~~~lA~~I~~~l 729 (781)
-+.++++++|.+++
T Consensus 410 ~~~~~~~~~~~~~~l~~av~~~m 432 (475)
T PLN02167 410 DYVSAYGEIVKADEIAGAVRSLM 432 (475)
T ss_pred ccccccCCcccHHHHHHHHHHHh
Confidence 26778888887776
No 181
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=80.14 E-value=91 Score=33.56 Aligned_cols=86 Identities=12% Similarity=0.099 Sum_probs=52.1
Q ss_pred hHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccC
Q 003987 587 MTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTK 666 (781)
Q Consensus 587 l~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aa 666 (781)
+..+++++..+.+.. +.+++++..... .| .+..+++.+.+.-...| +. ..+..|+..+++. +
T Consensus 190 ~~~l~~~l~~l~~~~-g~~v~~i~~~~~----~D------~~~~~~l~~~~~~~~~i--~~----~~~~~e~~~~i~~-~ 251 (298)
T TIGR03609 190 LLRLLRALDRLQRDT-GAFVLFLPFQQP----QD------LPLARALRDQLLGPAEV--LS----PLDPEELLGLFAS-A 251 (298)
T ss_pred HHHHHHHHHHHHHhh-CCeEEEEeCCcc----hh------HHHHHHHHHhcCCCcEE--Ee----cCCHHHHHHHHhh-C
Confidence 456666666665432 456655554321 11 23334444444322333 23 4467899999996 8
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCcEEEc
Q 003987 667 GAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (781)
Q Consensus 667 dvfV~PS~~E~fGltvlEAMa~GlPVVaT 695 (781)
+++|--.+ -..+=|+.+|+|+++-
T Consensus 252 ~~vI~~Rl-----H~~I~A~~~gvP~i~i 275 (298)
T TIGR03609 252 RLVIGMRL-----HALILAAAAGVPFVAL 275 (298)
T ss_pred CEEEEech-----HHHHHHHHcCCCEEEe
Confidence 87777654 4678899999999975
No 182
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=78.96 E-value=17 Score=39.46 Aligned_cols=99 Identities=14% Similarity=-0.011 Sum_probs=63.6
Q ss_pred CCCEEEEEeeccCCCChH--HHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003987 571 SKPIVFSMARLDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (781)
Q Consensus 571 ~k~iIl~vGRL~~~Kgl~--~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~ 648 (781)
++.+++..|.=...|.+. ...+.+..+.+. +++++++|+++. +.+..+++.+..+ +..+.|
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~--~~~~vl~~g~~~-----------e~~~~~~i~~~~~---~~~l~g- 241 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLAR--GLQIVLPWGNDA-----------EKQRAERIAEALP---GAVVLP- 241 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHC--CCeEEEeCCCHH-----------HHHHHHHHHhhCC---CCeecC-
Confidence 344566666545667664 566666666542 578888866643 1233344444332 235566
Q ss_pred ccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc
Q 003987 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (781)
Q Consensus 649 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT 695 (781)
..+-.++..+++. ++++|..-. -.+-=|-|.|+|+|+=
T Consensus 242 ---~~sL~el~ali~~-a~l~I~~DS-----gp~HlAaa~g~P~i~l 279 (319)
T TIGR02193 242 ---KMSLAEVAALLAG-ADAVVGVDT-----GLTHLAAALDKPTVTL 279 (319)
T ss_pred ---CCCHHHHHHHHHc-CCEEEeCCC-----hHHHHHHHcCCCEEEE
Confidence 6678999999995 999999842 3455567889999985
No 183
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=77.67 E-value=18 Score=39.83 Aligned_cols=102 Identities=14% Similarity=0.080 Sum_probs=62.5
Q ss_pred CCEEEEEeeccCCCChH--HHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 003987 572 KPIVFSMARLDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (781)
Q Consensus 572 k~iIl~vGRL~~~Kgl~--~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~ 649 (781)
..+++..|.-.+.|... ...+.+..+.+ .+.+++++|+..+ .+.+..+++.+..+-..-+.+.|
T Consensus 182 ~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~--~~~~ivl~g~p~~----------~e~~~~~~i~~~~~~~~~~~l~g-- 247 (344)
T TIGR02201 182 NYIVIQPTSRWFFKCWDNDRFSALIDALHA--RGYEVVLTSGPDK----------DELAMVNEIAQGCQTPRVTSLAG-- 247 (344)
T ss_pred CEEEEeCCCCccccCCCHHHHHHHHHHHHh--CCCeEEEecCCCH----------HHHHHHHHHHhhCCCCcccccCC--
Confidence 34556666544556553 44555555543 2578889886432 11222333333333222244666
Q ss_pred cCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc
Q 003987 650 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (781)
Q Consensus 650 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT 695 (781)
..+-.|+..+++. ++++|..- .-.+-=|-|.|+|+|+=
T Consensus 248 --~~sL~el~ali~~-a~l~Vs~D-----SGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 248 --KLTLPQLAALIDH-ARLFIGVD-----SVPMHMAAALGTPLVAL 285 (344)
T ss_pred --CCCHHHHHHHHHh-CCEEEecC-----CHHHHHHHHcCCCEEEE
Confidence 6778999999996 99999983 24566688999999985
No 184
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=76.16 E-value=19 Score=39.82 Aligned_cols=99 Identities=18% Similarity=0.090 Sum_probs=68.8
Q ss_pred CCEEEEEe-eccCCCChH--HHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003987 572 KPIVFSMA-RLDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (781)
Q Consensus 572 k~iIl~vG-RL~~~Kgl~--~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~ 648 (781)
+.+++..| .-...|++. ...+.+..+.+.. .+++++|+..+ .+...++.+.++ +.+.+.|
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~--~~Vvl~g~~~e------------~e~~~~i~~~~~--~~~~l~~- 238 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIAKG--YQVVLFGGPDE------------EERAEEIAKGLP--NAVILAG- 238 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHHCC--CEEEEecChHH------------HHHHHHHHHhcC--CccccCC-
Confidence 44567777 665777766 5666666666654 88999998733 455555665553 2233666
Q ss_pred ccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC
Q 003987 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (781)
Q Consensus 649 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~ 696 (781)
..+-.++..+++. ||++|.+.. -.+-=|-|.|+|+|+--
T Consensus 239 ---k~sL~e~~~li~~-a~l~I~~DS-----g~~HlAaA~~~P~I~iy 277 (334)
T COG0859 239 ---KTSLEELAALIAG-ADLVIGNDS-----GPMHLAAALGTPTIALY 277 (334)
T ss_pred ---CCCHHHHHHHHhc-CCEEEccCC-----hHHHHHHHcCCCEEEEE
Confidence 7788999999995 999998842 24455788999999963
No 185
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=76.02 E-value=9.6 Score=34.18 Aligned_cols=84 Identities=13% Similarity=0.164 Sum_probs=56.6
Q ss_pred EEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHH--HHHHHHccCcEEEEcCCCCCCc---H
Q 003987 606 LVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGE--LYRYIADTKGAFVQPAFYEAFG---L 680 (781)
Q Consensus 606 LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~e--l~~~la~aadvfV~PS~~E~fG---l 680 (781)
++|||+-.+ ....+++.++++|.. +.++|... .....+ +...+.+ +|+.|++.-+=+-. .
T Consensus 2 vliVGG~~~-----------~~~~~~~~~~~~G~~--~~~hg~~~-~~~~~~~~l~~~i~~-aD~VIv~t~~vsH~~~~~ 66 (97)
T PF10087_consen 2 VLIVGGRED-----------RERRYKRILEKYGGK--LIHHGRDG-GDEKKASRLPSKIKK-ADLVIVFTDYVSHNAMWK 66 (97)
T ss_pred EEEEcCCcc-----------cHHHHHHHHHHcCCE--EEEEecCC-CCccchhHHHHhcCC-CCEEEEEeCCcChHHHHH
Confidence 578888332 257888899998864 45554322 233334 8888885 99999987654433 3
Q ss_pred HHHHHHHcCCcEEEcCcccccccc
Q 003987 681 TVVEAMTCGLPTFATCHGGPAEII 704 (781)
Q Consensus 681 tvlEAMa~GlPVVaT~~gG~~EiI 704 (781)
+--+|-..|+|++.++..|...+.
T Consensus 67 vk~~akk~~ip~~~~~~~~~~~l~ 90 (97)
T PF10087_consen 67 VKKAAKKYGIPIIYSRSRGVSSLE 90 (97)
T ss_pred HHHHHHHcCCcEEEECCCCHHHHH
Confidence 456778889999999877765543
No 186
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=75.38 E-value=24 Score=36.22 Aligned_cols=38 Identities=16% Similarity=0.253 Sum_probs=25.8
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCC
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIP 342 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p 342 (781)
|||++....|+-. -| +. .|.+.|++.||+|. |+++...
T Consensus 1 M~ILlTNDDGi~a----------~G----i~--------aL~~~L~~~g~~V~----VvAP~~~ 38 (196)
T PF01975_consen 1 MRILLTNDDGIDA----------PG----IR--------ALAKALSALGHDVV----VVAPDSE 38 (196)
T ss_dssp SEEEEE-SS-TTS----------HH----HH--------HHHHHHTTTSSEEE----EEEESSS
T ss_pred CeEEEEcCCCCCC----------HH----HH--------HHHHHHHhcCCeEE----EEeCCCC
Confidence 8999999888721 12 34 56677877789999 9887744
No 187
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=74.56 E-value=12 Score=37.81 Aligned_cols=69 Identities=14% Similarity=0.013 Sum_probs=28.9
Q ss_pred CceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHH
Q 003987 407 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 486 (781)
Q Consensus 407 kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~ 486 (781)
+||+++....+.-.--...+++.|+|++..-=-+.... ...|.+... .-...++..|.|.+.|+..+
T Consensus 95 ~P~~~i~~EtElWPnll~~a~~~~ip~~LvNarls~~s-----------~~~~~~~~~--~~r~~l~~f~~i~aqs~~da 161 (186)
T PF04413_consen 95 RPDLLIWVETELWPNLLREAKRRGIPVVLVNARLSERS-----------FRRYRRFPF--LFRPLLSRFDRILAQSEADA 161 (186)
T ss_dssp --SEEEEES----HHHHHH-----S-EEEEEE-------------------------H--HHHHHGGG-SEEEESSHHHH
T ss_pred CCCEEEEEccccCHHHHHHHhhcCCCEEEEeeeecccc-----------chhhhhhHH--HHHHHHHhCCEEEECCHHHH
Confidence 89999977766433334566778999886532221111 011221111 12357889999999999877
Q ss_pred hh
Q 003987 487 AG 488 (781)
Q Consensus 487 ~~ 488 (781)
+.
T Consensus 162 ~r 163 (186)
T PF04413_consen 162 ER 163 (186)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 188
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=74.43 E-value=16 Score=36.11 Aligned_cols=60 Identities=17% Similarity=0.138 Sum_probs=36.8
Q ss_pred CCCceEEEEcCCCchHH-HHHHHH-H-c-CCcEEEEecCCcc-cCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEE
Q 003987 405 QGFPDFIIGNYSDGNLV-ASLLAY-K-M-GITQCTIAHALEK-TKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFII 479 (781)
Q Consensus 405 ~~kpDIIh~~~~~~~lv-a~llar-~-~-gvp~v~t~H~l~~-~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~II 479 (781)
..+||+|+|.++.++.+ ...+.+ . . ++|+++.+-+... .. . +.-..+|..+
T Consensus 87 ~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~H~------~------------------W~~~~~D~y~ 142 (169)
T PF06925_consen 87 EFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTVHP------F------------------WIHPGVDRYF 142 (169)
T ss_pred hcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCCCc------C------------------eecCCCCEEE
Confidence 34999999999886444 333333 3 3 4776655444321 11 1 2345789999
Q ss_pred ecCHHHHhh
Q 003987 480 TSTYQEIAG 488 (781)
Q Consensus 480 t~S~~~~~~ 488 (781)
+.|+..++.
T Consensus 143 Vase~~~~~ 151 (169)
T PF06925_consen 143 VASEEVKEE 151 (169)
T ss_pred ECCHHHHHH
Confidence 999887663
No 189
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=74.01 E-value=9.4 Score=37.97 Aligned_cols=83 Identities=12% Similarity=0.112 Sum_probs=45.3
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHH
Q 003987 406 GFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (781)
Q Consensus 406 ~kpDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (781)
..+|+|++.+-.. .-+-.+.....++|.++.+|.--. .|+.+....+.. .|.+ ......-.||.|+.+|..
T Consensus 58 ~~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl-~YP~~~~~~rd~--~~~~-----~ni~saLaAD~v~FNS~~ 129 (168)
T PF12038_consen 58 HSYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQL-AYPVSPGQERDF--QYGM-----NNIYSALAADRVVFNSAF 129 (168)
T ss_pred cCCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCcc-cCCCCCCccccc--cHHH-----HHHHHHHhceeeeecchh
Confidence 4689999776443 222222223357999999996322 233332122222 1221 122345579999999987
Q ss_pred HHhhcccccccc
Q 003987 485 EIAGTKNTVGQY 496 (781)
Q Consensus 485 ~~~~~k~~v~qy 496 (781)
-.+..-+.+.++
T Consensus 130 nr~sFL~~~~~f 141 (168)
T PF12038_consen 130 NRDSFLDGIPSF 141 (168)
T ss_pred hHHHHHHHHHHH
Confidence 666555554444
No 190
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=72.16 E-value=8.8 Score=41.29 Aligned_cols=80 Identities=16% Similarity=0.149 Sum_probs=48.8
Q ss_pred CCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCcc-cCCC---CChhhHhhhhccccchhhh-hHHHHHHhhCCEEE
Q 003987 406 GFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEK-TKYP---DSDIYWKKFDEKYHFSCQF-TADLIAMNNADFII 479 (781)
Q Consensus 406 ~kpDIIh~~~~~-~~lva~llar~~gvp~v~t~H~l~~-~k~~---~s~~~~k~~~~~y~f~~~~-~~e~~a~~~AD~II 479 (781)
.+.||+|+.... ++++|++++.+.|+|+++|=|+... .+.. .++..+....-+--+...| ..-..++..||.|+
T Consensus 171 P~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l~~~~Y~~Ad~I~ 250 (268)
T PF11997_consen 171 PKADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESLSRLAYRAADRIT 250 (268)
T ss_pred CCCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhCeec
Confidence 356999987766 4899999999999999999999632 1111 1111100000000011111 23456899999999
Q ss_pred ecCHHH
Q 003987 480 TSTYQE 485 (781)
Q Consensus 480 t~S~~~ 485 (781)
+.....
T Consensus 251 ~l~~~n 256 (268)
T PF11997_consen 251 PLYEYN 256 (268)
T ss_pred ccchhh
Confidence 988753
No 191
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=71.66 E-value=48 Score=38.53 Aligned_cols=141 Identities=18% Similarity=0.209 Sum_probs=72.9
Q ss_pred CCCEEEEEeecc--CCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003987 571 SKPIVFSMARLD--HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (781)
Q Consensus 571 ~k~iIl~vGRL~--~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~ 648 (781)
+..+.++.|.+. ..+.+..+..++..+.. --|+++.+......+.+.++...........++ ..++..+.+
T Consensus 261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~----~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~--~~~~g~v~~- 333 (455)
T PLN02152 261 SSVIYVSFGTMVELSKKQIEELARALIEGKR----PFLWVITDKLNREAKIEGEEETEIEKIAGFRHE--LEEVGMIVS- 333 (455)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHcCC----CeEEEEecCcccccccccccccccccchhHHHh--ccCCeEEEe-
Confidence 355677888765 34556667777766532 234445532110000000000000001122222 235555556
Q ss_pred ccCcCChHHHHHHHHccCc--EEEEcCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC-CeEEEEC-----CC
Q 003987 649 QTNRARNGELYRYIADTKG--AFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHID-----PY 716 (781)
Q Consensus 649 ~~~~v~~~el~~~la~aad--vfV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI~dg-~~G~lv~-----p~ 716 (781)
+++..++.. ... +||.= +=.++++||+.+|+|+|+- |....+..+.+. +.|+-+. .-
T Consensus 334 ---W~PQ~~iL~----h~~vg~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~ 402 (455)
T PLN02152 334 ---WCSQIEVLR----HRAVGCFVTH----CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLV 402 (455)
T ss_pred ---eCCHHHHhC----CcccceEEee----CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcC
Confidence 455555544 344 34443 2235899999999999996 344444455441 2455542 23
Q ss_pred CHHHHHHHHHHHH
Q 003987 717 HPDQAAELMADFF 729 (781)
Q Consensus 717 d~~~lA~~I~~~l 729 (781)
+.+++++++.+++
T Consensus 403 ~~e~l~~av~~vm 415 (455)
T PLN02152 403 ERGEIRRCLEAVM 415 (455)
T ss_pred cHHHHHHHHHHHH
Confidence 6788999998877
No 192
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=70.31 E-value=32 Score=37.56 Aligned_cols=96 Identities=15% Similarity=0.038 Sum_probs=59.8
Q ss_pred EEEEEeeccCCCChH--HHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccC
Q 003987 574 IVFSMARLDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (781)
Q Consensus 574 iIl~vGRL~~~Kgl~--~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~ 651 (781)
+++..|.-...|.+. ...+.+..+.+. +.++++.|+++. | .+...++.+. ...+.+.|
T Consensus 181 i~~~~~~s~~~k~Wp~e~~a~li~~l~~~--~~~ivl~~G~~~--------e---~~~~~~i~~~---~~~~~l~g---- 240 (322)
T PRK10964 181 LVFLHATTRDDKHWPEAHWRELIGLLAPS--GLRIKLPWGAEH--------E---EQRAKRLAEG---FPYVEVLP---- 240 (322)
T ss_pred EEEEeCCCcccccCCHHHHHHHHHHHHHC--CCeEEEeCCCHH--------H---HHHHHHHHcc---CCcceecC----
Confidence 334444433455554 566666666442 567777654533 1 2233333332 23466777
Q ss_pred cCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc
Q 003987 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (781)
Q Consensus 652 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT 695 (781)
..+-.|+..+++. +|++|..-. -.+-=|-|+|+|+|+-
T Consensus 241 ~~sL~elaali~~-a~l~I~nDS-----Gp~HlA~A~g~p~val 278 (322)
T PRK10964 241 KLSLEQVARVLAG-AKAVVSVDT-----GLSHLTAALDRPNITL 278 (322)
T ss_pred CCCHHHHHHHHHh-CCEEEecCC-----cHHHHHHHhCCCEEEE
Confidence 5678999999995 999999842 3556688999999995
No 193
>PF03401 TctC: Tripartite tricarboxylate transporter family receptor; InterPro: IPR005064 Bordetella pertussis, the causative agent of human whooping cough (pertussis), is an obligate human pathogen with diverse high-affinity transport systems for the assimilation of iron, a biometal that is essential for growth []. Periplasmic binding proteins of a new family, particularly well represented in this organism (and more generally in beta-proteobacteria), have been called Bug receptors []. They adopt a characteristic Venus flytrap fold with two globular domains bisected by a ligand-binding cleft. The family is specific for carboxylated solutes, with a characteristic mode of binding involving two highly conserved beta strand-beta turn-alpha helix motifs originating from each domain. These two motifs form hydrogen bonds with a carboxylate group of the ligand, both directly and via conserved water molecules, and have thus been termed the carboxylate pincers. Domain 1 recognises the ligand and the carboxylate group serves as an initial anchoring point. Domain 2 discriminates between productively and non-productively bound ligands as proper interactions with this domain is needed for the of the closed conformation []. BugE has a glutamate bound ligand. No charged residues are involved in glutamate binding by BugE, unlike what has been described for all glutamate receptors reported so far. The Bug architecture is highly conserved despite limited sequence identity [].; GO: 0030288 outer membrane-bounded periplasmic space; PDB: 2QPQ_C 2DVZ_A 2F5X_A.
Probab=69.80 E-value=59 Score=34.90 Aligned_cols=148 Identities=18% Similarity=0.180 Sum_probs=83.2
Q ss_pred CEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCc
Q 003987 573 PIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNR 652 (781)
Q Consensus 573 ~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~ 652 (781)
+.++.++.=.+.|+++.|++++++.+. .+++-..|.|.. . --....+.+++|+. ++++++..
T Consensus 79 ~~vl~v~~dsp~~t~~eli~~ak~~p~---~~~~g~~g~g~~----------~-hl~~~~l~~~~G~~--~~~Vpy~G-- 140 (274)
T PF03401_consen 79 PNVLVVRADSPYKTLEELIEYAKANPG---KLTFGSSGPGSS----------D-HLAAALLAKAAGIK--FTHVPYDG-- 140 (274)
T ss_dssp EEEEEEETTSS-SSHHHHHHHHHCSCC---C-EEEESSTTSH----------H-HHHHHHHHHHHT-----EEEE-SS--
T ss_pred ceEEEEeCCCccccHHHHHHHHHhCCC---CeEEEecCCCch----------H-HHHHHHHHHHhCCc--eEEEEeCC--
Confidence 456667666789999999999887543 244444443322 0 11334456677764 45555422
Q ss_pred CChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCC------------------cEEEcCccccccccccCCeEEEEC
Q 003987 653 ARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL------------------PTFATCHGGPAEIIEHGASGFHID 714 (781)
Q Consensus 653 v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl------------------PVVaT~~gG~~EiI~dg~~G~lv~ 714 (781)
..+.+..++....|+.+.. .-........|. |++.. . |..++....-.|+.++
T Consensus 141 -~~~~~~allgG~vd~~~~~------~~~~~~~~~~G~~k~Lav~~~~r~~~~pdvPT~~E-~-G~~d~~~~~~~g~~~p 211 (274)
T PF03401_consen 141 -GAEALTALLGGHVDAAFGS------PGEALPYVEAGDLKPLAVFSDERSPALPDVPTFKE-Q-GYPDIVFGSWRGLFAP 211 (274)
T ss_dssp -HHHHHHHHHTTSSSEEEEE------HHHHHHHHHTTSEEEEEECSSS-BTTCTTS-BTTT-T-T-TTG--EEEEEEEEE
T ss_pred -ccHHHHHHhCCeeeEEeec------HHHHHHHHhCCCceEEEEecCccccccCCCCCHHH-h-CccceeeeeeeeeecC
Confidence 2455666666666665553 112333333332 22211 1 2223333344689999
Q ss_pred CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 003987 715 PYHPDQAAELMADFFGKCKENPSHWKKISDGGL 747 (781)
Q Consensus 715 p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~ 747 (781)
++.+++..+.+.+.+++..+||+..+.+.+.+.
T Consensus 212 ~gtp~~~~~~l~~a~~~~~~~pe~~~~~~~~g~ 244 (274)
T PF03401_consen 212 KGTPDEIVDKLADAIKKALEDPEFQEFLEKMGL 244 (274)
T ss_dssp TTS-HHHHHHHHHHHHHHHT-HHHHHHHHHHTE
T ss_pred CCCCHHHHHHHHHHHHHHhCCHHHHHHHHHCCC
Confidence 999999999999999999999998877766553
No 194
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=67.05 E-value=40 Score=37.27 Aligned_cols=99 Identities=16% Similarity=0.027 Sum_probs=60.1
Q ss_pred CEEEEEeec-cCCCChH--HHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC--Cc-EEEe
Q 003987 573 PIVFSMARL-DHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD--GQ-FRWI 646 (781)
Q Consensus 573 ~iIl~vGRL-~~~Kgl~--~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~--~~-V~fl 646 (781)
.+++..|.= .+.|.+. ...+.+..+.+ .+++++++|+..+ .+...++.+..+-. .+ +.+.
T Consensus 182 ~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~--~~~~vvl~Gg~~e------------~~~~~~i~~~~~~~~~~~~~~l~ 247 (348)
T PRK10916 182 IIGFCPGAEFGPAKRWPHYHYAELAQQLID--EGYQVVLFGSAKD------------HEAGNEILAALNTEQQAWCRNLA 247 (348)
T ss_pred EEEEeCCCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEeCHHh------------HHHHHHHHHhcccccccceeecc
Confidence 344556542 3566554 44555555543 3578888887543 22333333333211 12 4455
Q ss_pred ccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc
Q 003987 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (781)
Q Consensus 647 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT 695 (781)
| ..+-.++..+++. ++++|..-. -.+-=|-|.|+|||+=
T Consensus 248 g----~~sL~el~ali~~-a~l~I~nDT-----Gp~HlAaA~g~P~val 286 (348)
T PRK10916 248 G----ETQLEQAVILIAA-CKAIVTNDS-----GLMHVAAALNRPLVAL 286 (348)
T ss_pred C----CCCHHHHHHHHHh-CCEEEecCC-----hHHHHHHHhCCCEEEE
Confidence 6 5678899999995 999998742 3455678999999974
No 195
>PRK02122 glucosamine-6-phosphate deaminase-like protein; Validated
Probab=65.31 E-value=18 Score=43.96 Aligned_cols=106 Identities=20% Similarity=0.294 Sum_probs=54.4
Q ss_pred HHHHHHHHHhcCCCCC-------CCchhHHHHhhhcCCccccCCcHHHHHHHHHHHHHhhcC-----CCcccHhhhhcCC
Q 003987 208 SSLSKAEDHLSKLPPD-------TPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQA-----PDPSTLEKFLGRL 275 (781)
Q Consensus 208 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~~~~~~~~-----p~~~~~~~f~~r~ 275 (781)
+-.++|.-.|+..-.. .-|.+ +.|.+|==+-||.-.+. .+.++-|...+.- |+....-.--..-
T Consensus 291 ~~~~~~~~~l~~~~~k~~l~l~~~d~~~--~~~~~l~~~~g~~~~~~--~~~f~~~~~~i~~~p~g~~~~~~~~~~~~~~ 366 (652)
T PRK02122 291 KLIRRAVVWLCQKLGKPILKLTDKDYNE--NGLSDLLAQYGSAYNVN--IKVFNDLQHTITGWPGGKPNADDTNRPERAL 366 (652)
T ss_pred HHHHHHHHHHHHHhCCCcccCchhhhhh--cCHHHHHHHhCcHHHHH--HHHHHHHHHHhcCCCCCCCCcccccCCcccc
Confidence 3567777777654321 11211 22333322446643332 3455666666632 2211111101123
Q ss_pred CCceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEcc
Q 003987 276 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (781)
Q Consensus 276 p~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~ 340 (781)
|..+||++||||- +..++| .|| ...+|+++||+|+ |+++|.+
T Consensus 367 ~~~~rvLv~spHP---DDevi~---~GG---------------Tlarl~~~G~~V~--vv~~TsG 408 (652)
T PRK02122 367 PYPKRVIIFSPHP---DDDVIS---MGG---------------TFRRLVEQGHDVH--VAYQTSG 408 (652)
T ss_pred cCCceEEEEEeCC---CchHhh---hHH---------------HHHHHHHCCCcEE--EEEecCC
Confidence 5568999999994 233444 466 3346899999999 4445544
No 196
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=63.96 E-value=55 Score=35.83 Aligned_cols=103 Identities=16% Similarity=0.113 Sum_probs=59.1
Q ss_pred HHHHHHHHCCCceeecceEEEcc--CCCCCCCccCc--ceeeecCCCCeEEEEeccCCCcccccccccccCchhhHHHHH
Q 003987 318 EMLLRIKRQGLDISPKILIVTRL--IPDAKGTTCNQ--RLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFT 393 (781)
Q Consensus 318 eLa~~L~~~GheV~~~v~VvT~~--~p~~~~~~~~~--~~e~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~ 393 (781)
.|.+.|.++||.|- |++-. .|-..|.-... +.......+|+.|-.+|.+...| -+..-.
T Consensus 70 ~L~~~l~~~G~rVa----VlAVDPSSp~TGGsiLGDRiRM~~~~~~~~vFiRs~~srG~lG-------------GlS~at 132 (323)
T COG1703 70 ALGRELRERGHRVA----VLAVDPSSPFTGGSILGDRIRMQRLAVDPGVFIRSSPSRGTLG-------------GLSRAT 132 (323)
T ss_pred HHHHHHHHCCcEEE----EEEECCCCCCCCccccccHhhHHhhccCCCeEEeecCCCccch-------------hhhHHH
Confidence 67788899999999 66544 22223332222 33445555678888888776533 122334
Q ss_pred HHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCC
Q 003987 394 EDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHAL 440 (781)
Q Consensus 394 ~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l 440 (781)
.++...+.+. .+|+|+.-....+=.=.-++....+-++++..+.
T Consensus 133 ~~~i~~ldAa---G~DvIIVETVGvGQsev~I~~~aDt~~~v~~pg~ 176 (323)
T COG1703 133 REAIKLLDAA---GYDVIIVETVGVGQSEVDIANMADTFLVVMIPGA 176 (323)
T ss_pred HHHHHHHHhc---CCCEEEEEecCCCcchhHHhhhcceEEEEecCCC
Confidence 4555555443 8999998776543222233344455556666554
No 197
>PLN02207 UDP-glycosyltransferase
Probab=62.98 E-value=77 Score=36.98 Aligned_cols=134 Identities=10% Similarity=0.040 Sum_probs=70.0
Q ss_pred CCCEEEEEeeccC--CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003987 571 SKPIVFSMARLDH--VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (781)
Q Consensus 571 ~k~iIl~vGRL~~--~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~ 648 (781)
+..+.++.|.+.. .+-+..++.+++.+.. --++.+.+........-+ +.+ .++ ..++....+
T Consensus 275 ~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~----~flW~~r~~~~~~~~~lp------~~f---~er--~~~~g~i~~- 338 (468)
T PLN02207 275 ASVVFLCFGSMGRLRGPLVKEIAHGLELCQY----RFLWSLRTEEVTNDDLLP------EGF---LDR--VSGRGMICG- 338 (468)
T ss_pred CcEEEEEeccCcCCCHHHHHHHHHHHHHCCC----cEEEEEeCCCccccccCC------HHH---Hhh--cCCCeEEEE-
Confidence 4566777887653 3345566666665532 233444421110000000 111 112 234555556
Q ss_pred ccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CCeEEEEC---------
Q 003987 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHID--------- 714 (781)
Q Consensus 649 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI~d-g~~G~lv~--------- 714 (781)
+++-.++...= +.+.||.=. | -++++||+.+|+|+|+- +....+..+.+ -+.|+-+.
T Consensus 339 ---W~PQ~~IL~H~--~vg~FvTH~---G-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~ 409 (468)
T PLN02207 339 ---WSPQVEILAHK--AVGGFVSHC---G-WNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDE 409 (468)
T ss_pred ---eCCHHHHhccc--ccceeeecC---c-cccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCC
Confidence 55555665531 133455431 2 24789999999999996 33444454333 45566331
Q ss_pred CCCHHHHHHHHHHHH
Q 003987 715 PYHPDQAAELMADFF 729 (781)
Q Consensus 715 p~d~~~lA~~I~~~l 729 (781)
.-+.++++++|.+++
T Consensus 410 ~v~~e~i~~av~~vm 424 (468)
T PLN02207 410 IVNANEIETAIRCVM 424 (468)
T ss_pred cccHHHHHHHHHHHH
Confidence 226788999998887
No 198
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=62.10 E-value=33 Score=36.65 Aligned_cols=84 Identities=12% Similarity=-0.034 Sum_probs=44.7
Q ss_pred HHHHHcCCC-CcE-EEeccccCcCChHHHHHHHHc-cCcEEEEcCCCC--CCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003987 632 ELMKTYKLD-GQF-RWIAAQTNRARNGELYRYIAD-TKGAFVQPAFYE--AFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (781)
Q Consensus 632 ~li~elgL~-~~V-~flG~~~~~v~~~el~~~la~-aadvfV~PS~~E--~fGltvlEAMa~GlPVVaT~~gG~~EiI~d 706 (781)
+.+.++|++ .++ -.-| +.+.+.=..++.+ .+|++|.=-.-+ |+--++--|+.+|+|||.-+-+-...
T Consensus 165 ~~~~~~G~~~~~iia~~g----Pfs~e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~~---- 236 (256)
T TIGR00715 165 AQALKLGFPSDRIIAMRG----PFSEELEKALLREYRIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQTIP---- 236 (256)
T ss_pred HHHHHcCCChhcEEEEeC----CCCHHHHHHHHHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCCC----
Confidence 356777774 233 3344 2222222223321 255666543322 55667888999999999986553211
Q ss_pred CCeEEEECCCCHHHHHHHHHH
Q 003987 707 GASGFHIDPYHPDQAAELMAD 727 (781)
Q Consensus 707 g~~G~lv~p~d~~~lA~~I~~ 727 (781)
+ +-.+ .+.+++.+.+.+
T Consensus 237 ~--~~~~--~~~~el~~~l~~ 253 (256)
T TIGR00715 237 G--VAIF--DDISQLNQFVAR 253 (256)
T ss_pred C--CccC--CCHHHHHHHHHH
Confidence 0 0122 367777666654
No 199
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=61.97 E-value=1.6e+02 Score=29.56 Aligned_cols=130 Identities=16% Similarity=0.217 Sum_probs=64.0
Q ss_pred CCCceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCccee
Q 003987 275 LPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLE 354 (781)
Q Consensus 275 ~p~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e 354 (781)
++|.|||.|-.+ | -. |-...++ .+++.|.+.|+.|. =++|...-+ .|.....+..
T Consensus 2 ~~~~mki~ITG~---P---------Gv-GKtTl~~--------ki~e~L~~~g~kvg---Gf~t~EVR~-gGkR~GF~Iv 56 (179)
T COG1618 2 IKMAMKIFITGR---P---------GV-GKTTLVL--------KIAEKLREKGYKVG---GFITPEVRE-GGKRIGFKIV 56 (179)
T ss_pred CCcceEEEEeCC---C---------Cc-cHHHHHH--------HHHHHHHhcCceee---eEEeeeeec-CCeEeeeEEE
Confidence 578999988743 2 22 4455555 78889999999886 355544322 1222222333
Q ss_pred eecCCCCeEEEEeccCCCcccccccccccCc-hhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-----hHH--HHHHH
Q 003987 355 RVSGTEHTHILRVPFRSEKGILRQWISRFDV-WPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-----NLV--ASLLA 426 (781)
Q Consensus 355 ~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i-~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~-----~lv--a~lla 426 (781)
.+...+..+.-++-+.... +.+.-+ ...++..+..+.+...+ ..|+|+...-.+ .-+ +.--.
T Consensus 57 dl~tg~~~~la~~~~~~~r------vGkY~V~v~~le~i~~~al~rA~~----~aDvIIIDEIGpMElks~~f~~~ve~v 126 (179)
T COG1618 57 DLATGEEGILARVGFSRPR------VGKYGVNVEGLEEIAIPALRRALE----EADVIIIDEIGPMELKSKKFREAVEEV 126 (179)
T ss_pred EccCCceEEEEEcCCCCcc------cceEEeeHHHHHHHhHHHHHHHhh----cCCEEEEecccchhhccHHHHHHHHHH
Confidence 3332233344444332110 111111 11233333333322222 479999765443 111 22222
Q ss_pred HHcCCcEEEEecC
Q 003987 427 YKMGITQCTIAHA 439 (781)
Q Consensus 427 r~~gvp~v~t~H~ 439 (781)
-..+.|++.|+|-
T Consensus 127 l~~~kpliatlHr 139 (179)
T COG1618 127 LKSGKPLIATLHR 139 (179)
T ss_pred hcCCCcEEEEEec
Confidence 2357899999993
No 200
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=61.22 E-value=20 Score=38.47 Aligned_cols=70 Identities=10% Similarity=0.139 Sum_probs=48.1
Q ss_pred hHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCC-cEEEcC--ccccccccccCCeEEEECCCCHHHHHHHH
Q 003987 655 NGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-PTFATC--HGGPAEIIEHGASGFHIDPYHPDQAAELM 725 (781)
Q Consensus 655 ~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl-PVVaT~--~gG~~EiI~dg~~G~lv~p~d~~~lA~~I 725 (781)
..+....|++ +..+++|.-...+..-++|||++|| |||.++ .-...++|.=....+.++..+..++-+.|
T Consensus 227 ~~~~~~~l~~-S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL 299 (302)
T PF03016_consen 227 PSEYMELLRN-SKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEIL 299 (302)
T ss_pred chHHHHhccc-CeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHH
Confidence 3456667774 7777788777678889999999995 777764 23455666445667777766665554444
No 201
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=58.36 E-value=9.9 Score=38.57 Aligned_cols=33 Identities=18% Similarity=0.457 Sum_probs=26.7
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEcc
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~ 340 (781)
|||+||...|+-| +++++...++||+|+ -++|.
T Consensus 1 mKIaiIgAsG~~G-------------------------s~i~~EA~~RGHeVT----AivRn 33 (211)
T COG2910 1 MKIAIIGASGKAG-------------------------SRILKEALKRGHEVT----AIVRN 33 (211)
T ss_pred CeEEEEecCchhH-------------------------HHHHHHHHhCCCeeE----EEEeC
Confidence 7999999887632 167778899999999 88777
No 202
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=57.13 E-value=1.7e+02 Score=31.35 Aligned_cols=35 Identities=26% Similarity=0.398 Sum_probs=22.9
Q ss_pred cCCCceEEEEcCC-----------CchHHHHHHHHHcCCcEEEEec
Q 003987 404 LQGFPDFIIGNYS-----------DGNLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 404 ~~~kpDIIh~~~~-----------~~~lva~llar~~gvp~v~t~H 438 (781)
+..+||+|++--. .+-..|++-+...|+|-+..-.
T Consensus 88 ~~~~pDLVvSGIN~G~N~G~dv~ySGTVgAA~Ea~~~GiPsIA~S~ 133 (257)
T PRK13932 88 LPEKPDLIVSGINYGSNTATNTLYSGTVAAALEGAIQGIPSLAFSL 133 (257)
T ss_pred cCCCCCEEEECCcCCCCCCcCEecchhHHHHHHHHHcCCCeEEEEc
Confidence 3558999994211 1235566777788999887654
No 203
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=54.39 E-value=2.5e+02 Score=28.55 Aligned_cols=94 Identities=13% Similarity=0.051 Sum_probs=54.5
Q ss_pred CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHH-cCCCCcEEEeccccCcCChHHHHHHH
Q 003987 584 VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT-YKLDGQFRWIAAQTNRARNGELYRYI 662 (781)
Q Consensus 584 ~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~e-lgL~~~V~flG~~~~~v~~~el~~~l 662 (781)
..-...+.+.+..+........++.+...... ........... .....++..... ..+..++..++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 255 (286)
T PF04230_consen 189 EEYIEEIAELIQRLLDKGYKIVLLPFSPSDDD----------EDDDDFNEIDIKAEKFFNVIIIDY---SLSPDELLELI 255 (286)
T ss_pred hhHHHHHHHHHHHhhcccceeEEEEeeeccch----------hhHHHHHhhhhhcccccceeEecC---CCCHHHHHHHH
Confidence 33445556666666554334445445444331 11111111110 222334444442 55678999999
Q ss_pred HccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC
Q 003987 663 ADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (781)
Q Consensus 663 a~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~ 696 (781)
+. ++++|...+ -..+=|+++|+|+|+-.
T Consensus 256 ~~-~~~~Is~Rl-----H~~I~a~~~g~P~i~i~ 283 (286)
T PF04230_consen 256 SQ-ADLVISMRL-----HGAILALSLGVPVIAIS 283 (286)
T ss_pred hc-CCEEEecCC-----HHHHHHHHcCCCEEEEe
Confidence 95 999998865 46788999999999864
No 204
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=53.54 E-value=2.1e+02 Score=30.36 Aligned_cols=36 Identities=25% Similarity=0.389 Sum_probs=23.3
Q ss_pred cCCCceEEEE--cC---------CCchHHHHHHHHHcCCcEEEEecC
Q 003987 404 LQGFPDFIIG--NY---------SDGNLVASLLAYKMGITQCTIAHA 439 (781)
Q Consensus 404 ~~~kpDIIh~--~~---------~~~~lva~llar~~gvp~v~t~H~ 439 (781)
+..+||+|++ |. +.+-..|++-+...|+|-+..-.+
T Consensus 83 ~~~~pDLVvSGiN~G~N~g~~v~ySGTVgAA~ea~~~GipaiA~S~~ 129 (244)
T TIGR00087 83 MPEVPDLVISGINAGENLGTDVTYSGTVGAAMEAAIHGVPAIAISLQ 129 (244)
T ss_pred ccCCCCeEEeccccCCCCCccEecchhHHHHHHHHHcCCCeEEEEec
Confidence 3568999994 21 112345667777889998876553
No 205
>PRK06988 putative formyltransferase; Provisional
Probab=49.26 E-value=88 Score=34.41 Aligned_cols=19 Identities=32% Similarity=0.569 Sum_probs=12.5
Q ss_pred HHHHHHHHCCCceeecceEEEc
Q 003987 318 EMLLRIKRQGLDISPKILIVTR 339 (781)
Q Consensus 318 eLa~~L~~~GheV~~~v~VvT~ 339 (781)
...+.|.+.|++|. .|+|.
T Consensus 16 ~~L~~L~~~~~~i~---~Vvt~ 34 (312)
T PRK06988 16 RCLQVLLARGVDVA---LVVTH 34 (312)
T ss_pred HHHHHHHhCCCCEE---EEEcC
Confidence 44566778899876 35554
No 206
>PLN02534 UDP-glycosyltransferase
Probab=46.73 E-value=2.8e+02 Score=32.58 Aligned_cols=77 Identities=10% Similarity=0.049 Sum_probs=44.6
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcE--EEEcCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccc-cCCeEEEE
Q 003987 641 GQFRWIAAQTNRARNGELYRYIADTKGA--FVQPAFYEAFGLTVVEAMTCGLPTFATCHG----GPAEIIE-HGASGFHI 713 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadv--fV~PS~~E~fGltvlEAMa~GlPVVaT~~g----G~~EiI~-dg~~G~lv 713 (781)
.++.+.| +++..++.. ..++ ||.- +=.++++||+++|+|+|+-... -.+..+. .-+.|+-+
T Consensus 344 ~g~~v~~----w~pq~~iL~----h~~v~~fvtH----~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~ 411 (491)
T PLN02534 344 RGLLIKG----WAPQVLILS----HPAIGGFLTH----CGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRV 411 (491)
T ss_pred CCeeccC----CCCHHHHhc----CCccceEEec----CccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEe
Confidence 4566666 455555554 3444 5554 2246899999999999997432 2222222 21233332
Q ss_pred C---------------CCCHHHHHHHHHHHH
Q 003987 714 D---------------PYHPDQAAELMADFF 729 (781)
Q Consensus 714 ~---------------p~d~~~lA~~I~~~l 729 (781)
. --+.+++++++.+++
T Consensus 412 ~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m 442 (491)
T PLN02534 412 GVEVPVRWGDEERVGVLVKKDEVEKAVKTLM 442 (491)
T ss_pred cccccccccccccccCccCHHHHHHHHHHHh
Confidence 1 025778888888776
No 207
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=43.21 E-value=1.2e+02 Score=31.80 Aligned_cols=49 Identities=24% Similarity=0.276 Sum_probs=30.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCceEEE---EcCCCc-hHHHHHHHHHcCCcEEEEec
Q 003987 388 YLETFTEDVGSEITAELQGFPDFII---GNYSDG-NLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 388 yl~~f~~~~~~~i~~~~~~kpDIIh---~~~~~~-~lva~llar~~gvp~v~t~H 438 (781)
|.+.+.....+.+-..++ .. +|+ .||..+ -.-....++.+.+|.|++.-
T Consensus 56 yres~~ks~~rlldSalk-n~-~VIvDdtNYyksmRrqL~ceak~~~tt~ciIyl 108 (261)
T COG4088 56 YRESFLKSVERLLDSALK-NY-LVIVDDTNYYKSMRRQLACEAKERKTTWCIIYL 108 (261)
T ss_pred HHHHHHHHHHHHHHHHhc-ce-EEEEecccHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 566677777776666544 22 344 455555 23445677888899887643
No 208
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=42.33 E-value=2.2e+02 Score=33.14 Aligned_cols=97 Identities=7% Similarity=0.099 Sum_probs=63.7
Q ss_pred HHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCC-cEEEcC--ccccccccccCCeEEEECCCCHHHHHHHHHHHHHhc
Q 003987 656 GELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-PTFATC--HGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKC 732 (781)
Q Consensus 656 ~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl-PVVaT~--~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l 732 (781)
....+.+++ +-.+++|+-.+...-.++||+.+|| |||.++ .....+++.-..-++.++ .+++-+.|.+.|..
T Consensus 335 ~~y~~~m~~-S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~---~~~v~~~~~~iL~~- 409 (464)
T KOG1021|consen 335 LNYMEGMQD-SKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVP---EKDVPELIKNILLS- 409 (464)
T ss_pred chHHHHhhc-CeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEE---HHHhhhHHHHHHHh-
Confidence 345667775 8788889999988899999999995 888886 344555555455566665 33333334444422
Q ss_pred cCCHHHHHHHHHHHHHHHHHhcCcch
Q 003987 733 KENPSHWKKISDGGLKRIYERLVVSS 758 (781)
Q Consensus 733 ~~dp~~~~~~s~~a~~~~~~~ysw~~ 758 (781)
...+...+|.++-...+...+.|..
T Consensus 410 -i~~~~~~~m~~~v~~~v~r~~~~~~ 434 (464)
T KOG1021|consen 410 -IPEEEVLRMRENVIRLVPRHFLKKP 434 (464)
T ss_pred -cCHHHHHHHHHHHHHHHHhhEEeCC
Confidence 2234446666666656777887764
No 209
>COG1647 Esterase/lipase [General function prediction only]
Probab=41.79 E-value=1.3e+02 Score=31.61 Aligned_cols=43 Identities=21% Similarity=0.257 Sum_probs=29.1
Q ss_pred HHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEec
Q 003987 394 EDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 394 ~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H 438 (781)
.+..+.+.. .+-..|.++--+.|+.++..++..+.++-+++.-
T Consensus 73 ~d~Y~~L~~--~gy~eI~v~GlSmGGv~alkla~~~p~K~iv~m~ 115 (243)
T COG1647 73 EDGYRDLKE--AGYDEIAVVGLSMGGVFALKLAYHYPPKKIVPMC 115 (243)
T ss_pred HHHHHHHHH--cCCCeEEEEeecchhHHHHHHHhhCCccceeeec
Confidence 344444443 3445577788889999999999998766555443
No 210
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=40.57 E-value=58 Score=36.43 Aligned_cols=106 Identities=22% Similarity=0.161 Sum_probs=54.4
Q ss_pred cccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCC-CCCCccCcc-----eeeecCCCCeEEEEeccCCCcc
Q 003987 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPD-AKGTTCNQR-----LERVSGTEHTHILRVPFRSEKG 374 (781)
Q Consensus 301 ~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~-~~~~~~~~~-----~e~v~~~~~~~I~rvp~~~~~~ 374 (781)
+||+...|. |..|+++||+|. =++....+ ..+..|... .+.+...-|+..+.+.|.
T Consensus 11 SGGVDSSVa----------A~lLk~QGyeVi----Gl~m~~~~~~~~~~C~s~~d~~da~~va~~LGIp~~~vdf~---- 72 (356)
T COG0482 11 SGGVDSSVA----------AYLLKEQGYEVI----GLFMKNWDEDGGGGCCSEEDLRDAERVADQLGIPLYVVDFE---- 72 (356)
T ss_pred cCCHHHHHH----------HHHHHHcCCeEE----EEEEEeeccCCCCcCCchhHHHHHHHHHHHhCCceEEEchH----
Confidence 478766655 345899999998 55544333 222233321 223333334555554443
Q ss_pred cccccccccCchhhHHHHHHHHHHHHHHHc----CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCC
Q 003987 375 ILRQWISRFDVWPYLETFTEDVGSEITAEL----QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHAL 440 (781)
Q Consensus 375 ~~~~~isr~~i~~yl~~f~~~~~~~i~~~~----~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l 440 (781)
+.|...+...+.... --.|| |.||...-.-.+.-.++.+|.-.+.|-|-.
T Consensus 73 ---------------~~y~~~V~~~f~~~Y~~G~TPNPc-i~CN~~iKF~~~l~~a~~lgad~iATGHYa 126 (356)
T COG0482 73 ---------------KEFWNKVFEYFLAEYKAGKTPNPC-ILCNKEIKFKALLDYAKELGADYIATGHYA 126 (356)
T ss_pred ---------------HHHHHHHHHHHHHHHhCCCCCCcc-hhcCHHHHHHHHHHHHHHcCCCeEEEeeeE
Confidence 233333333333332 23577 556654432223334445898899998853
No 211
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=40.03 E-value=2.6e+02 Score=33.74 Aligned_cols=162 Identities=10% Similarity=0.067 Sum_probs=98.8
Q ss_pred ccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003987 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (781)
Q Consensus 561 ~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~ 640 (781)
+..+|+ +.+..++...-.| .|=-...++.+.++.+..|+..|++.---.- ..+.++..++++|++
T Consensus 750 r~~y~L--p~d~vvf~~FNqL--yKidP~~l~~W~~ILk~VPnS~LwllrfPa~-----------ge~rf~ty~~~~Gl~ 814 (966)
T KOG4626|consen 750 RSQYGL--PEDAVVFCNFNQL--YKIDPSTLQMWANILKRVPNSVLWLLRFPAV-----------GEQRFRTYAEQLGLE 814 (966)
T ss_pred CCCCCC--CCCeEEEeechhh--hcCCHHHHHHHHHHHHhCCcceeEEEecccc-----------chHHHHHHHHHhCCC
Confidence 345777 4454444444333 4444566777777777788888887654322 136788899999985
Q ss_pred -CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccc-----cccCCeEEEEC
Q 003987 641 -GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEI-----IEHGASGFHID 714 (781)
Q Consensus 641 -~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~Ei-----I~dg~~G~lv~ 714 (781)
++|.|... ...+|-.+-.. -+||.+=+..+-|. .|-.|.+-+|+|+|.-...-.+-- +..-+.|-++
T Consensus 815 p~riifs~v----a~k~eHvrr~~-LaDv~LDTplcnGh-TTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hli- 887 (966)
T KOG4626|consen 815 PDRIIFSPV----AAKEEHVRRGQ-LADVCLDTPLCNGH-TTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLI- 887 (966)
T ss_pred ccceeeccc----cchHHHHHhhh-hhhhcccCcCcCCc-ccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHH-
Confidence 68888863 33344445455 37888877766553 355788889999986432111111 1111233344
Q ss_pred CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Q 003987 715 PYHPDQAAELMADFFGKCKENPSHWKKISDGGLK 748 (781)
Q Consensus 715 p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~ 748 (781)
..+-++..+.-.++- .|.+..+++...-+.
T Consensus 888 ak~~eEY~~iaV~La----td~~~L~~lr~~l~~ 917 (966)
T KOG4626|consen 888 AKNREEYVQIAVRLA----TDKEYLKKLRAKLRK 917 (966)
T ss_pred hhhHHHHHHHHHHhh----cCHHHHHHHHHHHHH
Confidence 246777777766655 788888877665544
No 212
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=39.53 E-value=1.4e+02 Score=31.02 Aligned_cols=30 Identities=27% Similarity=0.368 Sum_probs=20.3
Q ss_pred CCceEEEEcCCC--chHHHHHHHHH-cCCcEEE
Q 003987 406 GFPDFIIGNYSD--GNLVASLLAYK-MGITQCT 435 (781)
Q Consensus 406 ~kpDIIh~~~~~--~~lva~llar~-~gvp~v~ 435 (781)
.+.|++.+-... .|+++..++++ +|+|.++
T Consensus 65 ~~aD~vva~t~~d~~N~i~~~la~~~~gv~~vi 97 (225)
T COG0569 65 DDADAVVAATGNDEVNSVLALLALKEFGVPRVI 97 (225)
T ss_pred CcCCEEEEeeCCCHHHHHHHHHHHHhcCCCcEE
Confidence 478888854443 37777777766 8988664
No 213
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=38.48 E-value=4.4e+02 Score=30.31 Aligned_cols=141 Identities=15% Similarity=0.168 Sum_probs=74.0
Q ss_pred CCEEEEEeeccC-----CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC--CCCcEE
Q 003987 572 KPIVFSMARLDH-----VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK--LDGQFR 644 (781)
Q Consensus 572 k~iIl~vGRL~~-----~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elg--L~~~V~ 644 (781)
..++++.|.... .+-...++.+++++ +++.|+.+=..... . . +.+... -.++|.
T Consensus 278 ~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~----~~~~FiW~~~~~~~-----------~-~---~~~~~~~~~~~nV~ 338 (496)
T KOG1192|consen 278 SVVYISFGSMVNSADLPEEQKKELAKALESL----QGVTFLWKYRPDDS-----------I-Y---FPEGLPNRGRGNVV 338 (496)
T ss_pred CeEEEECCcccccccCCHHHHHHHHHHHHhC----CCceEEEEecCCcc-----------h-h---hhhcCCCCCcCceE
Confidence 556777787753 34444566666554 45666655544330 0 0 222221 135677
Q ss_pred EeccccCcCChHHHHHHHHc-cCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----Cccccccccc-cCCeEEEEC--CC
Q 003987 645 WIAAQTNRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIE-HGASGFHID--PY 716 (781)
Q Consensus 645 flG~~~~~v~~~el~~~la~-aadvfV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI~-dg~~G~lv~--p~ 716 (781)
..+ ++|-.++. +.. +.++||.= -|++ +++||..+|+|+++. |..-.+..+. +|..|.... -.
T Consensus 339 ~~~----W~PQ~~ll--l~H~~v~~FvTH---gG~n-St~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~ 408 (496)
T KOG1192|consen 339 LSK----WAPQNDLL--LDHPAVGGFVTH---GGWN-STLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLV 408 (496)
T ss_pred Eec----CCCcHHHh--cCCCcCcEEEEC---Cccc-HHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhcC
Confidence 777 44444544 221 12233331 3444 459999999999964 3444445444 455555442 22
Q ss_pred CHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 003987 717 HPDQAAELMADFFGKCKENPSHWKKISDGG 746 (781)
Q Consensus 717 d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a 746 (781)
+.. +.+++..++ .++++.+...+-+
T Consensus 409 ~~~-~~~~~~~il----~~~~y~~~~~~l~ 433 (496)
T KOG1192|consen 409 SEE-LLEAIKEIL----ENEEYKEAAKRLS 433 (496)
T ss_pred cHH-HHHHHHHHH----cChHHHHHHHHHH
Confidence 333 666776665 6777665544433
No 214
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=38.18 E-value=2e+02 Score=30.63 Aligned_cols=40 Identities=15% Similarity=0.170 Sum_probs=26.0
Q ss_pred HHHHHHHHcCCCceEEE-EcCCCc---hHHHHHHHHHcCCcEEEEec
Q 003987 396 VGSEITAELQGFPDFII-GNYSDG---NLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 396 ~~~~i~~~~~~kpDIIh-~~~~~~---~lva~llar~~gvp~v~t~H 438 (781)
+..++.+. ++++|+ +..++. .--+.-+++.+|+|++-.-.
T Consensus 57 l~~~l~~~---~i~~VIDATHPfA~~is~~a~~ac~~~~ipyiR~eR 100 (248)
T PRK08057 57 LAAYLREE---GIDLVIDATHPYAAQISANAAAACRALGIPYLRLER 100 (248)
T ss_pred HHHHHHHC---CCCEEEECCCccHHHHHHHHHHHHHHhCCcEEEEeC
Confidence 44444443 788888 444443 45567788889999986544
No 215
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=37.23 E-value=4.2e+02 Score=26.58 Aligned_cols=110 Identities=9% Similarity=0.173 Sum_probs=65.6
Q ss_pred eEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHc-cCcEEEEcCCCCC----C
Q 003987 604 VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIAD-TKGAFVQPAFYEA----F 678 (781)
Q Consensus 604 v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~-aadvfV~PS~~E~----f 678 (781)
.+++|+.+.+. ....+....++.+ .+..++.. ....+....+.. ..|++++-....+ -
T Consensus 4 ~~Ilivdd~~~-----------~~~~l~~~L~~~~---~~~~v~~~---~~~~~~~~~~~~~~~DlvllD~~l~~~~~~~ 66 (216)
T PRK10840 4 MNVIIADDHPI-----------VLFGIRKSLEQIE---WVNVVGEF---EDSTALINNLPKLDAHVLITDLSMPGDKYGD 66 (216)
T ss_pred eEEEEECCcHH-----------HHHHHHHHHhcCC---CCEEEEEE---CCHHHHHHHHHhCCCCEEEEeCcCCCCCCCC
Confidence 56777777644 2344555554432 23323211 123455555442 3688877543332 5
Q ss_pred cHHHHHHHH---cCCcEEE-cCcccc---ccccccCCeEEEECCCCHHHHHHHHHHHHH
Q 003987 679 GLTVVEAMT---CGLPTFA-TCHGGP---AEIIEHGASGFHIDPYHPDQAAELMADFFG 730 (781)
Q Consensus 679 GltvlEAMa---~GlPVVa-T~~gG~---~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~ 730 (781)
|+.+++.+. .++|||+ |..... .+.+..|..||+..|.+++++.++|..+..
T Consensus 67 g~~~~~~l~~~~~~~~iIvls~~~~~~~~~~a~~~Ga~~yl~K~~~~~~l~~ai~~v~~ 125 (216)
T PRK10840 67 GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQK 125 (216)
T ss_pred HHHHHHHHHHHCCCCcEEEEEecCCHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHHHC
Confidence 777777764 3467766 433332 234677999999999999999999987763
No 216
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=37.05 E-value=2.5e+02 Score=29.73 Aligned_cols=34 Identities=12% Similarity=0.006 Sum_probs=21.6
Q ss_pred CCCceEEEEc--CCCchHHHHHHHHHcCCcEEEEec
Q 003987 405 QGFPDFIIGN--YSDGNLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 405 ~~kpDIIh~~--~~~~~lva~llar~~gvp~v~t~H 438 (781)
...+|.|... ...+.-+.-.+-+.+|+|++....
T Consensus 179 ~~~aDAifisCTnLrt~~vi~~lE~~lGkPVlsSNq 214 (239)
T TIGR02990 179 DPDADALFLSCTALRAATCAQRIEQAIGKPVVTSNQ 214 (239)
T ss_pred CCCCCEEEEeCCCchhHHHHHHHHHHHCCCEEEHHH
Confidence 3478877733 333444555667779999986544
No 217
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=35.56 E-value=89 Score=31.97 Aligned_cols=48 Identities=21% Similarity=0.353 Sum_probs=38.7
Q ss_pred hhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEE
Q 003987 386 WPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQC 434 (781)
Q Consensus 386 ~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v 434 (781)
|..+......+++.+.+. +.+||+|++-.-.|...|.+++..+|+.-+
T Consensus 9 w~~I~~~~~~lA~kI~~s-~~~PDvIiaiaRGG~~pariLsd~L~~~~l 56 (192)
T COG2236 9 WEEIHRLCRALAEKIRAS-GFKPDVIVAIARGGLIPARILSDFLGVKPL 56 (192)
T ss_pred HHHHHHHHHHHHHHHHHc-CCCCCEEEEEcCCceehHHHHHHHhCCCce
Confidence 556667777777777754 679999999988888999999999998533
No 218
>COG3580 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.42 E-value=3.5e+02 Score=29.85 Aligned_cols=166 Identities=9% Similarity=0.014 Sum_probs=91.1
Q ss_pred EEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcC
Q 003987 574 IVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRA 653 (781)
Q Consensus 574 iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v 653 (781)
.|+..--|.-..+....-.-|..+ .++ |+.-+..+ +++.+.--+....+ |-|.- .+
T Consensus 23 ~IGiPRvLn~ye~yPff~tffteL-----Gf~-VVlS~~S~-------------kely~~G~~ti~se-vCfPa----ki 78 (351)
T COG3580 23 TIGIPRVLNMYEYYPFFHTFFTEL-----GFR-VVLSPKSS-------------KELYEKGIETIPSE-VCFPA----KI 78 (351)
T ss_pred eecchHHHHHhhccHHHHHHHHHc-----Cce-EEeCCCCc-------------HHHHHhhhhhCCcc-ceece----ee
Confidence 444444444455555555555544 356 33333322 23444444444444 77775 78
Q ss_pred ChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc-------CccccccccccCCeEEEECCCCHHHHHHHHH
Q 003987 654 RNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-------CHGGPAEIIEHGASGFHIDPYHPDQAAELMA 726 (781)
Q Consensus 654 ~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT-------~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~ 726 (781)
.++.++.++.+..|....|+..--.+-- -+--..-||+|++ +..+.+|-+ .-..++ ++-.|.+.+.+.+.
T Consensus 79 ~HGHi~~L~~K~~d~IFyP~l~~~~~E~-~a~n~~~CP~V~~~pEvik~nip~l~d~v-~~~~P~-~~l~~~~~~~~~~~ 155 (351)
T COG3580 79 SHGHIMDLIKKGIDYIFYPCLRYIKSEQ-SANNHYNCPIVQSYPEVIKNNIPDLRDGV-MYLYPF-LDLENKELLKEQFY 155 (351)
T ss_pred chhHHHHHHHcCCCeEEecccccccccc-cccccccCccccCcHHHHHhcCccccccc-eeecce-ecccchhHHHHHHH
Confidence 8899999999889999999863222211 2233456888876 234444300 112233 34457888889888
Q ss_pred HHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 727 DFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 727 ~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
..+..|-..... .+.|.+.+.+.+.--+..+...+++++.
T Consensus 156 ~~~~~~~~s~~E----~~~Avqka~~~~~e~r~dir~k~~e~L~ 195 (351)
T COG3580 156 KVFKEIGLSKEE----NEEAVQKAWKEGEEYREDIRKKGEEVLK 195 (351)
T ss_pred HHHHhcCchHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888766644433 3334444333332223456666777664
No 219
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=34.68 E-value=6e+02 Score=27.19 Aligned_cols=35 Identities=20% Similarity=0.374 Sum_probs=22.7
Q ss_pred cCCCceEEEEcCC-----------CchHHHHHHHHHcCCcEEEEec
Q 003987 404 LQGFPDFIIGNYS-----------DGNLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 404 ~~~kpDIIh~~~~-----------~~~lva~llar~~gvp~v~t~H 438 (781)
+..+||+|++--. .+-..|+.-+...|+|-+..-.
T Consensus 83 ~~~~pDLVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~ 128 (253)
T PRK13935 83 MDKKVDLVISGINRGPNLGTDVLYSGTVSGALEGAMMGVPSIAISS 128 (253)
T ss_pred ccCCCCEEEeCCccCCCCCcCCcccHhHHHHHHHHhcCCCeEEEEc
Confidence 3558999994111 1234566677778999887654
No 220
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=32.94 E-value=6.4e+02 Score=26.98 Aligned_cols=35 Identities=11% Similarity=0.226 Sum_probs=22.7
Q ss_pred cCCCceEEEEcCC-----------CchHHHHHHHHHcCCcEEEEec
Q 003987 404 LQGFPDFIIGNYS-----------DGNLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 404 ~~~kpDIIh~~~~-----------~~~lva~llar~~gvp~v~t~H 438 (781)
+..+||+|++--. .+-..|++-+...|+|-+..-.
T Consensus 84 ~~~~pDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPsiA~S~ 129 (253)
T PRK13933 84 VPDNIDMVISGINKGLNIGNDILYSGTVSAAIEGAIYKVPSIAVSA 129 (253)
T ss_pred cCCCCCEEEECCcCCCCCCcCCccchhHHHHHHHHHcCCCeEEEEe
Confidence 3568999994211 1235566777788999886643
No 221
>PLN00016 RNA-binding protein; Provisional
Probab=32.51 E-value=44 Score=37.37 Aligned_cols=20 Identities=15% Similarity=0.275 Sum_probs=16.9
Q ss_pred HHHHHHHHCCCceeecceEEEccC
Q 003987 318 EMLLRIKRQGLDISPKILIVTRLI 341 (781)
Q Consensus 318 eLa~~L~~~GheV~~~v~VvT~~~ 341 (781)
.|++.|.++||+|+ ++++..
T Consensus 71 ~lv~~L~~~G~~V~----~l~R~~ 90 (378)
T PLN00016 71 YLAKELVKAGHEVT----LFTRGK 90 (378)
T ss_pred HHHHHHHHCCCEEE----EEecCC
Confidence 67778899999999 998874
No 222
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=32.48 E-value=2.5e+02 Score=28.81 Aligned_cols=39 Identities=15% Similarity=0.223 Sum_probs=28.6
Q ss_pred HHHHccCc-EEEEcCCCCCCcHHHHHHHHcCCcEEEcCcc
Q 003987 660 RYIADTKG-AFVQPAFYEAFGLTVVEAMTCGLPTFATCHG 698 (781)
Q Consensus 660 ~~la~aad-vfV~PS~~E~fGltvlEAMa~GlPVVaT~~g 698 (781)
++++...| +++.|...+...-.+-++...|+|||..+.+
T Consensus 50 ~~i~~~~d~Iiv~~~~~~~~~~~l~~~~~~gIpvv~~d~~ 89 (257)
T PF13407_consen 50 QAISQGVDGIIVSPVDPDSLAPFLEKAKAAGIPVVTVDSD 89 (257)
T ss_dssp HHHHTTESEEEEESSSTTTTHHHHHHHHHTTSEEEEESST
T ss_pred HHHHhcCCEEEecCCCHHHHHHHHHHHhhcCceEEEEecc
Confidence 33444455 5556666777777788899999999998777
No 223
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=31.71 E-value=1.7e+02 Score=31.36 Aligned_cols=34 Identities=15% Similarity=0.026 Sum_probs=26.2
Q ss_pred CceEEEEcC----CCchHHHHHHHHHcCCcEEEEecCC
Q 003987 407 FPDFIIGNY----SDGNLVASLLAYKMGITQCTIAHAL 440 (781)
Q Consensus 407 kpDIIh~~~----~~~~lva~llar~~gvp~v~t~H~l 440 (781)
.||+|.|-. .+++.++..+|..+|+|++..+-.+
T Consensus 112 ~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~l 149 (256)
T PRK03359 112 GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSKI 149 (256)
T ss_pred CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEEE
Confidence 599999532 2347899999999999998766543
No 224
>COG1830 FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
Probab=31.56 E-value=4.4e+02 Score=28.36 Aligned_cols=125 Identities=14% Similarity=0.199 Sum_probs=67.1
Q ss_pred EEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcC
Q 003987 574 IVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRA 653 (781)
Q Consensus 574 iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v 653 (781)
+-+++|.-.+.+.+..+.++...-.+..-.+-+++..-|+...++. ....+.....-+++.++|-+ |.=..+..+
T Consensus 116 ~~Vy~Gse~e~~~i~~~~~v~~~a~~~Gmp~v~~~YpRg~~~~~~~-~~d~~~v~~aaRlaaelGAD--IiK~~ytg~-- 190 (265)
T COG1830 116 ATVYVGSETEREMIENISQVVEDAHELGMPLVAWAYPRGPAIKDEY-HRDADLVGYAARLAAELGAD--IIKTKYTGD-- 190 (265)
T ss_pred EEEecCCcchHHHHHHHHHHHHHHHHcCCceEEEEeccCCcccccc-cccHHHHHHHHHHHHHhcCC--eEeecCCCC--
Confidence 4567788777777777777766665554444555666665532210 11222334444455565532 322221111
Q ss_pred ChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccc------------ccccCCeEEE-----ECCC
Q 003987 654 RNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE------------IIEHGASGFH-----IDPY 716 (781)
Q Consensus 654 ~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~E------------iI~dg~~G~l-----v~p~ 716 (781)
. |.|-.++ -+||+|||.+ ||+.. .++.|..|.. +...
T Consensus 191 --~-------------------e~F~~vv---~~~~vpVvia--GG~k~~~~~~~l~~~~~ai~aGa~G~~~GRNifQ~~ 244 (265)
T COG1830 191 --P-------------------ESFRRVV---AACGVPVVIA--GGPKTETEREFLEMVTAAIEAGAMGVAVGRNIFQHE 244 (265)
T ss_pred --h-------------------HHHHHHH---HhCCCCEEEe--CCCCCCChHHHHHHHHHHHHccCcchhhhhhhhccC
Confidence 1 2332222 3677888887 33332 3445666664 3456
Q ss_pred CHHHHHHHHHHHH
Q 003987 717 HPDQAAELMADFF 729 (781)
Q Consensus 717 d~~~lA~~I~~~l 729 (781)
++++++++|..+.
T Consensus 245 ~p~~m~~Ai~~Iv 257 (265)
T COG1830 245 DPEAMVKAIQAIV 257 (265)
T ss_pred ChHHHHHHHHHHh
Confidence 8888888887765
No 225
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=31.13 E-value=4.7e+02 Score=31.23 Aligned_cols=126 Identities=13% Similarity=0.148 Sum_probs=79.6
Q ss_pred CCEEEEEeeccC-CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003987 572 KPIVFSMARLDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (781)
Q Consensus 572 k~iIl~vGRL~~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~ 650 (781)
++.-+..|.-.. .||-+..++.+.+..+ ++-.|.+.... ...+++-|.=+|
T Consensus 277 ~~~AlVyGK~~~~w~~k~~~l~~l~~~~e----ih~tV~~~~~~---------------------~~~~P~~V~NHG--- 328 (559)
T PF15024_consen 277 KNQALVYGKERYMWKGKEKYLDVLHKYME----IHGTVYDEPQR---------------------PPNVPSFVKNHG--- 328 (559)
T ss_pred cceeEEEccchhhhcCcHHHHHHHHhhcE----EEEEeccCCCC---------------------CcccchhhhhcC---
Confidence 444455555443 6677777777765432 34333332211 112334455556
Q ss_pred CcCChHHHHHHHHccCcEEEEcCC-CCCCcHHHHHHHHcCCcEEEcCcccccc-------------------------cc
Q 003987 651 NRARNGELYRYIADTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAE-------------------------II 704 (781)
Q Consensus 651 ~~v~~~el~~~la~aadvfV~PS~-~E~fGltvlEAMa~GlPVVaT~~gG~~E-------------------------iI 704 (781)
.++..|+...+.. +-+||=--. +| |-+.+||+|.|+|-|-.....+.- .|
T Consensus 329 -~l~~~ef~~lL~~-akvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~i 404 (559)
T PF15024_consen 329 -ILSGDEFQQLLRK-AKVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFI 404 (559)
T ss_pred -cCCHHHHHHHHHh-hhEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhC
Confidence 5667899999996 888886532 45 558899999999988775433321 11
Q ss_pred ccCCeEEEECCCCHHHHHHHHHHHHH
Q 003987 705 EHGASGFHIDPYHPDQAAELMADFFG 730 (781)
Q Consensus 705 ~dg~~G~lv~p~d~~~lA~~I~~~l~ 730 (781)
..-.-+.|+-+|.+++-++|.+++.
T Consensus 405 -G~PhVytVd~~n~~~v~~Avk~il~ 429 (559)
T PF15024_consen 405 -GEPHVYTVDINNSTEVEAAVKAILA 429 (559)
T ss_pred -CCCeEEEEcCCCHHHHHHHHHHHHh
Confidence 1224577899999999999998884
No 226
>TIGR00732 dprA DNA protecting protein DprA. Disruption of this gene in both Haemophilus influenzae and Helicobacter pylori drastically reduces the efficiency of transformation with exogenous DNA, but with different levels of effect on chromosomal (linear) and plasmid (circular) DNA. This difference suggests the DprA is not active in recombination, and it has been shown not to affect DNA binding, leaving the intermediate step in natural transformation, DNA processing. In Strep. pneumoniae, inactivation of dprA had no effect on the uptake of DNA. All of these data indicated that DprA is required at a later stage in transformation. Subsequently DprA and RecA were both shown in S. pneumoniae to be required to protect incoming ssDNA from immediate degradation. Role of DprA in non-transformable species is not known. The gene symbol smf was assigned in E. coli, but without assignment of function.
Probab=30.70 E-value=3.6e+02 Score=28.08 Aligned_cols=125 Identities=15% Similarity=0.111 Sum_probs=62.3
Q ss_pred CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC-CCCcEE-Ee-ccccCcCChHHHHH
Q 003987 584 VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK-LDGQFR-WI-AAQTNRARNGELYR 660 (781)
Q Consensus 584 ~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elg-L~~~V~-fl-G~~~~~v~~~el~~ 660 (781)
.+|++..+.-.+... ....+.|+|+|.+... + .+-.++.+.+.+.| +- |. |. +....+..-..--+
T Consensus 82 A~GiD~~ah~~al~~---~g~tIaVl~~gld~~y---p---~~n~~l~~~i~~~ggll--iSe~p~~~~~~~~~f~~RNr 150 (220)
T TIGR00732 82 ALGIDGIAHKAALKV---NGRTIAVLGTGLDQIY---P---RQNSKLAAKIAENGGLL--LSEYPPDTKPIKYNFPKRNR 150 (220)
T ss_pred hhhHHHHHHHHHHHc---CCCEEEEECCCCccCC---c---hhhHHHHHHHHHcCCEE--EEecCCCCCCCcccHHHHHH
Confidence 578888776555432 2357778888865211 1 11233333333333 20 00 00 10000101112234
Q ss_pred HHHccCcEEEEcCCCCCCc--HHHHHHHHcCCcEEEcC-------ccccccccccCCeEEEECCCCHHHHHH
Q 003987 661 YIADTKGAFVQPAFYEAFG--LTVVEAMTCGLPTFATC-------HGGPAEIIEHGASGFHIDPYHPDQAAE 723 (781)
Q Consensus 661 ~la~aadvfV~PS~~E~fG--ltvlEAMa~GlPVVaT~-------~gG~~EiI~dg~~G~lv~p~d~~~lA~ 723 (781)
+++..++..|...-.+.-| .++-.|+..|+||++-. ..|...+|.+| ...+. +.+++.+
T Consensus 151 iia~ls~~vivve~~~~sGtl~ta~~A~~~gr~v~~~pg~~~~~~~~G~~~Li~~G-A~~i~---~~~d~~~ 218 (220)
T TIGR00732 151 IISGLSRAVLVVEAPLKSGALITARYALEQGREVFAYPGDLNSPESDGCHKLIEQG-AALIT---SAKDILE 218 (220)
T ss_pred HHHHhcCEEEEEECCCCCchHHHHHHHHHhCCcEEEEcCCCCCccchHHHHHHHCC-CEEEC---CHHHHHH
Confidence 4444455444443333334 57889999999999972 24677888877 33333 4555443
No 227
>COG3171 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=30.59 E-value=42 Score=31.12 Aligned_cols=32 Identities=38% Similarity=0.661 Sum_probs=26.9
Q ss_pred HhhhcCCcccc----CCcHHHHHHHHHHHHHhhcCC
Q 003987 232 VLQGMGFEKGW----GDTAEHVLEMMHLLLDILQAP 263 (781)
Q Consensus 232 ~~~~~~~~~gw----g~~~~~~~~~~~~~~~~~~~p 263 (781)
+||+|||..-| |..|+-+-|++....|-+.+|
T Consensus 25 EFQeLgF~v~~~~~eg~~ae~~dea~drFidevI~~ 60 (119)
T COG3171 25 EFQELGFSVQWSFHEGTSAEDVDEAVDRFIDEVIAP 60 (119)
T ss_pred HHHhhheeeEEEecCCccHHHHHHHHHHHHHHHHcc
Confidence 59999999999 778999999998887666554
No 228
>PLN02534 UDP-glycosyltransferase
Probab=30.30 E-value=5.9e+02 Score=29.95 Aligned_cols=38 Identities=21% Similarity=0.458 Sum_probs=27.3
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccC
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLI 341 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~ 341 (781)
..|+++. ||+| |-..-.+ +|++.|+.+|+.|+ +++...
T Consensus 9 ~Hvv~vP---fpaq----------GHi~P~l--------~LAk~La~~G~~vT----~v~t~~ 46 (491)
T PLN02534 9 LHFVLIP---LMAQ----------GHMIPMI--------DMARLLAERGVIVS----LVTTPQ 46 (491)
T ss_pred CEEEEEC---CCCc----------chHHHHH--------HHHHHHHhCCCeEE----EEECCC
Confidence 3677774 5544 5556666 77888899999999 887653
No 229
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=30.25 E-value=39 Score=38.46 Aligned_cols=38 Identities=24% Similarity=0.621 Sum_probs=27.4
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCC
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGT 347 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~ 347 (781)
|||+++....+ |+++|.. |.+.||+|. .|+| +|+..|.
T Consensus 1 mkiaiigqs~f-------------g~~vy~~-------------lrk~gheiv---~vft--ipdk~g~ 38 (881)
T KOG2452|consen 1 MKIAVIGQSLF-------------GQEVYCH-------------LRKEGHEVV---GVFT--VPDKDGK 38 (881)
T ss_pred CeeEEechhhh-------------hHHHHHH-------------HHhcCceEE---EEEE--ecCCCCC
Confidence 79999986554 7777776 899999985 3454 5665554
No 230
>PRK04531 acetylglutamate kinase; Provisional
Probab=29.86 E-value=1.3e+02 Score=34.22 Aligned_cols=55 Identities=7% Similarity=0.109 Sum_probs=35.0
Q ss_pred CCCCEEEEEee-ccCCCChHHHHHHHHHhhccCCCeEEEEE-eCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003987 570 RSKPIVFSMAR-LDHVKNMTGLVECYGKNSQLRELVNLVVV-AGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (781)
Q Consensus 570 ~~k~iIl~vGR-L~~~Kgl~~LieA~~~l~~~~~~v~LvIV-G~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~ 642 (781)
+.+..++-+|. +-. .++..++..++.+... ..++||| |+|+. +.++.++.|++.+
T Consensus 35 ~~~~~VIKiGG~~l~-~~~~~l~~dla~L~~~--G~~~VlVHGggpq---------------I~~~l~~~gie~~ 91 (398)
T PRK04531 35 AERFAVIKVGGAVLR-DDLEALASSLSFLQEV--GLTPIVVHGAGPQ---------------LDAELDAAGIEKE 91 (398)
T ss_pred CCcEEEEEEChHHhh-cCHHHHHHHHHHHHHC--CCcEEEEECCCHH---------------HHHHHHHcCCCcE
Confidence 34555666654 322 3578888888887765 3555555 66643 6677888888754
No 231
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=29.14 E-value=2e+02 Score=30.60 Aligned_cols=40 Identities=13% Similarity=0.034 Sum_probs=26.2
Q ss_pred HHHHHHHHcCCCceEEE-EcCCCc---hHHHHHHHHHcCCcEEEEec
Q 003987 396 VGSEITAELQGFPDFII-GNYSDG---NLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 396 ~~~~i~~~~~~kpDIIh-~~~~~~---~lva~llar~~gvp~v~t~H 438 (781)
+..++.+ .++++|+ +..+.. .--+.-+++..|+|++-.-.
T Consensus 58 l~~~l~~---~~i~~vIDATHPfA~~is~na~~a~~~~~ipylR~eR 101 (249)
T PF02571_consen 58 LAEFLRE---NGIDAVIDATHPFAAEISQNAIEACRELGIPYLRFER 101 (249)
T ss_pred HHHHHHh---CCCcEEEECCCchHHHHHHHHHHHHhhcCcceEEEEc
Confidence 3444444 3888888 444443 45577788899999986554
No 232
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=29.09 E-value=1e+02 Score=30.62 Aligned_cols=40 Identities=25% Similarity=0.489 Sum_probs=0.0
Q ss_pred HHHHHHHHccCcEEEEcCC----CCCCcHH--HHHHHHcCCcEEEc
Q 003987 656 GELYRYIADTKGAFVQPAF----YEAFGLT--VVEAMTCGLPTFAT 695 (781)
Q Consensus 656 ~el~~~la~aadvfV~PS~----~E~fGlt--vlEAMa~GlPVVaT 695 (781)
..+.+-+.+.+|++|.--+ .||-|+. +.+|++.|+||+++
T Consensus 84 ~~l~~al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~ 129 (159)
T PF10649_consen 84 AALRRALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTA 129 (159)
T ss_pred HHHHHHHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEE
No 233
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=29.07 E-value=6.4e+02 Score=26.41 Aligned_cols=125 Identities=8% Similarity=-0.032 Sum_probs=62.2
Q ss_pred CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcH-H
Q 003987 603 LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGL-T 681 (781)
Q Consensus 603 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGl-t 681 (781)
.+++.+|..... ++++++++ .++|+|... ....++ +.+ +++.+...--+...- .
T Consensus 48 gA~VtVVap~i~-------------~el~~l~~----~~~i~~~~r---~~~~~d----l~g-~~LViaATdD~~vN~~I 102 (223)
T PRK05562 48 GCYVYILSKKFS-------------KEFLDLKK----YGNLKLIKG---NYDKEF----IKD-KHLIVIATDDEKLNNKI 102 (223)
T ss_pred CCEEEEEcCCCC-------------HHHHHHHh----CCCEEEEeC---CCChHH----hCC-CcEEEECCCCHHHHHHH
Confidence 577777776654 23444433 356788752 222222 343 554444433333333 3
Q ss_pred HHHHHHcCCcEEEcCccccccc-----cccCCeEEEE-CCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH
Q 003987 682 VVEAMTCGLPTFATCHGGPAEI-----IEHGASGFHI-DPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (781)
Q Consensus 682 vlEAMa~GlPVVaT~~gG~~Ei-----I~dg~~G~lv-~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~ 752 (781)
.-+|.+.|.+|.+.+.....+. +..|.--+-+ .-+....+|..|.+-++.+..+-+.+-+.....|+.+.+
T Consensus 103 ~~~a~~~~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST~G~sP~lar~lR~~ie~~l~~~~~l~~~l~~~R~~vk~ 179 (223)
T PRK05562 103 RKHCDRLYKLYIDCSDYKKGLCIIPYQRSTKNFVFALNTKGGSPKTSVFIGEKVKNFLKKYDDFIEYVTKIRNKAKK 179 (223)
T ss_pred HHHHHHcCCeEEEcCCcccCeEEeeeEEecCCEEEEEECCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4566677999888765444433 3333322222 223344566666555554443334444444555555544
No 234
>PRK12342 hypothetical protein; Provisional
Probab=28.89 E-value=1.7e+02 Score=31.35 Aligned_cols=34 Identities=12% Similarity=0.003 Sum_probs=26.4
Q ss_pred CceEEEEcC----CCchHHHHHHHHHcCCcEEEEecCC
Q 003987 407 FPDFIIGNY----SDGNLVASLLAYKMGITQCTIAHAL 440 (781)
Q Consensus 407 kpDIIh~~~----~~~~lva~llar~~gvp~v~t~H~l 440 (781)
.||+|.|-. .+.+-++..+|..+|.|++..+..+
T Consensus 109 ~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~~~ 146 (254)
T PRK12342 109 GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSKI 146 (254)
T ss_pred CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEEEE
Confidence 599999533 2347889999999999999877644
No 235
>KOG0832 consensus Mitochondrial/chloroplast ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=28.68 E-value=6.8e+02 Score=26.46 Aligned_cols=58 Identities=16% Similarity=0.230 Sum_probs=38.7
Q ss_pred CcEEEEcCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCCeEEEECCCC-HHHHHHHHHHHH
Q 003987 666 KGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYH-PDQAAELMADFF 729 (781)
Q Consensus 666 advfV~PS~~E~fGltvlEAMa~GlPVVaT-~~gG~~EiI~dg~~G~lv~p~d-~~~lA~~I~~~l 729 (781)
.|++|.-...|.. .+++||.-+++|+|+- |....++.| -+-|+.+| .-...+-+..++
T Consensus 174 ~D~vvvln~~e~~-sAilEA~K~~IPTIgIVDtN~~P~li-----TYpVPaNDDs~~sv~f~~~l~ 233 (251)
T KOG0832|consen 174 PDLVVVLNPEENH-SAILEAAKMAIPTIGIVDTNCNPELI-----TYPVPANDDSPASVEFILNLL 233 (251)
T ss_pred cceeEecCccccc-HHHHHHHHhCCCeEEEecCCCCccce-----eeccCCCCCcHHHHHHHHHHH
Confidence 3788887776764 5899999999999996 555666666 34565543 333344444444
No 236
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=28.61 E-value=6.8e+02 Score=26.89 Aligned_cols=111 Identities=12% Similarity=0.051 Sum_probs=67.9
Q ss_pred EEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCC---CcchHHHHHHHHHHHHHHHcCCCCcEEEeccccC
Q 003987 575 VFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNK---SKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (781)
Q Consensus 575 Il~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~---~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~ 651 (781)
++.++...-....+.+++.++++++.. .+++..|... |.- |.+---.+..+.+++.++++|++=-....
T Consensus 28 ~~~iaGPCsie~~~~~~~~A~~lk~~g--~~~~r~~~~k-pRTs~~s~~G~g~~gl~~l~~~~~~~Gl~~~te~~----- 99 (266)
T PRK13398 28 KIIIAGPCAVESEEQMVKVAEKLKELG--VHMLRGGAFK-PRTSPYSFQGLGEEGLKILKEVGDKYNLPVVTEVM----- 99 (266)
T ss_pred EEEEEeCCcCCCHHHHHHHHHHHHHcC--CCEEEEeeec-CCCCCCccCCcHHHHHHHHHHHHHHcCCCEEEeeC-----
Confidence 455665677778899999999998854 5566666332 211 11211245667788889999875222222
Q ss_pred cCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHH-HHcCCcEEEcCc
Q 003987 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEA-MTCGLPTFATCH 697 (781)
Q Consensus 652 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEA-Ma~GlPVVaT~~ 697 (781)
..+-..++.+..|++-.+|. +..-..++++ -..|+||+.++.
T Consensus 100 ---d~~~~~~l~~~vd~~kIga~-~~~n~~LL~~~a~~gkPV~lk~G 142 (266)
T PRK13398 100 ---DTRDVEEVADYADMLQIGSR-NMQNFELLKEVGKTKKPILLKRG 142 (266)
T ss_pred ---ChhhHHHHHHhCCEEEECcc-cccCHHHHHHHhcCCCcEEEeCC
Confidence 12334455556889999986 2333444444 456999999853
No 237
>TIGR03642 cas_csx13 CRISPR-associated protein, Csx13 family. This model describes a protein N-terminal protein sequence domain strictly associated with CRISPR and CRISPR-associated protein systems. This model and TIGR02584 identify two separate clades from a larger homology domain family, both CRISPR-associated, while other homologs are found that may not be. Members are found in bacteria that include Pelotomaculum thermopropionicum SI, Thermoanaerobacter tengcongensis MB4, and Roseiflexus sp. RS-1, and in archaea that include Thermoplasma volcanium, Picrophilus torridus, and Methanospirillum hungatei. The molecular function is unknown.
Probab=27.74 E-value=2.2e+02 Score=27.13 Aligned_cols=101 Identities=18% Similarity=0.185 Sum_probs=48.6
Q ss_pred HHHHHHHHCCCceeecceEEEccCCCCC-CCccCcceeeecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHH
Q 003987 318 EMLLRIKRQGLDISPKILIVTRLIPDAK-GTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDV 396 (781)
Q Consensus 318 eLa~~L~~~GheV~~~v~VvT~~~p~~~-~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~ 396 (781)
|...+|.++|-.++ .|++++...+... +... ...+-.......+|..++..-. ...--.-...+...+
T Consensus 9 Etl~aL~~~g~~i~-ev~lI~T~~~~v~~~~~~-l~~~l~~~~~~~~i~~i~~~~~---------DI~t~~d~~~~~~~I 77 (124)
T TIGR03642 9 EAIDYLKKKGEPIS-DVILIYTKDPYVLSALRA-LKDSLLKKFYKAEVHKIPLKFD---------DILSDEDILTFMSIA 77 (124)
T ss_pred HHHHHHHhcCCCCC-eEEEEEcCCHHHHHHHHH-HHHHhHHhcCCcEEEEeccCcc---------ccCCHHHHHHHHHHH
Confidence 66778899999876 4445554432211 1000 0000001111345544442210 111111234555555
Q ss_pred HHHHHHHcCCCce--EEEEcCCCc----hHHHHHHHHHcC
Q 003987 397 GSEITAELQGFPD--FIIGNYSDG----NLVASLLAYKMG 430 (781)
Q Consensus 397 ~~~i~~~~~~kpD--IIh~~~~~~----~lva~llar~~g 430 (781)
.+.+... ..+++ -+|.+-+.| ++.+.+++..+|
T Consensus 78 ~~~i~~l-~~~~~~~~lh~~iaGGRK~Ms~~~~~a~sl~g 116 (124)
T TIGR03642 78 AKEVKKE-RENYGCERIIVNISGGRKIMTIILALYAQLLF 116 (124)
T ss_pred HHHHHHH-hhCCCcceEEEEecCCHHHHHHHHHHHHHHhC
Confidence 5555543 34566 699888876 566666666665
No 238
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=27.73 E-value=1.7e+02 Score=30.01 Aligned_cols=124 Identities=16% Similarity=0.093 Sum_probs=66.9
Q ss_pred cCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCC-cEEEec-cccCcCChHHHH
Q 003987 582 DHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDG-QFRWIA-AQTNRARNGELY 659 (781)
Q Consensus 582 ~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~-~V~flG-~~~~~v~~~el~ 659 (781)
+-.|=+..|..|+.-+.+.. .-++++||..+. ....+++.++..|-.. .=+|+| ..+|+.. .
T Consensus 41 dL~kT~~~L~~A~~~i~~i~-~~~ILfVgtk~~-----------~~~~V~~~A~~~g~~~v~~RWlgGtLTN~~~----~ 104 (196)
T TIGR01012 41 DLRKTDERLRVAAKFLVRIE-PEDILVVSARIY-----------GQKPVLKFAKVTGARAIAGRFTPGTFTNPMQ----K 104 (196)
T ss_pred cHHHHHHHHHHHHHHHHHhh-CCeEEEEecCHH-----------HHHHHHHHHHHhCCceECCeeCCCCCCCccc----c
Confidence 33454555666655444433 458899998865 1234555565554321 127887 2233211 1
Q ss_pred HHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCCeEEEECCCC-HHHHHHHHHHHH
Q 003987 660 RYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYH-PDQAAELMADFF 729 (781)
Q Consensus 660 ~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT-~~gG~~EiI~dg~~G~lv~p~d-~~~lA~~I~~~l 729 (781)
. +. -=|+++...-. .=..++.||...|+|||+- |....+..| -+.++.+| .-.....+..++
T Consensus 105 ~-~~-~Pdlliv~dp~-~~~~Av~EA~~l~IP~Iai~DTn~dp~~v-----dypIP~Ndds~~Si~li~~ll 168 (196)
T TIGR01012 105 A-FR-EPEVVVVTDPR-ADHQALKEASEVGIPIVALCDTDNPLRYV-----DLVIPTNNKGRHSLALIYWLL 168 (196)
T ss_pred c-cC-CCCEEEEECCc-cccHHHHHHHHcCCCEEEEeeCCCCCccC-----CEEECCCCchHHHHHHHHHHH
Confidence 1 12 13444443221 2256899999999999995 666666665 34565543 333344444444
No 239
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=27.57 E-value=4.3e+02 Score=30.39 Aligned_cols=103 Identities=10% Similarity=0.022 Sum_probs=66.4
Q ss_pred CCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccC
Q 003987 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (781)
Q Consensus 572 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~ 651 (781)
..+-+..+..++..-..-|++++. +.+|++++++.-..+. ..+...+.++-.-.+.+++.
T Consensus 50 p~vWiHaaSVGEv~a~~pLv~~l~---~~~P~~~ilvTt~T~T--------------g~e~a~~~~~~~v~h~YlP~--- 109 (419)
T COG1519 50 PLVWIHAASVGEVLAALPLVRALR---ERFPDLRILVTTMTPT--------------GAERAAALFGDSVIHQYLPL--- 109 (419)
T ss_pred CeEEEEecchhHHHHHHHHHHHHH---HhCCCCCEEEEecCcc--------------HHHHHHHHcCCCeEEEecCc---
Confidence 345677888888877777777654 5678999988887765 22333444543345666652
Q ss_pred cCChHHHHHHHHcc-CcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC
Q 003987 652 RARNGELYRYIADT-KGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (781)
Q Consensus 652 ~v~~~el~~~la~a-advfV~PS~~E~fGltvlEAMa~GlPVVaT~ 696 (781)
-...-+.+++..- -|+.| -...|=+|+++.|+-..|+|++.-|
T Consensus 110 -D~~~~v~rFl~~~~P~l~I-i~EtElWPnli~e~~~~~~p~~LvN 153 (419)
T COG1519 110 -DLPIAVRRFLRKWRPKLLI-IMETELWPNLINELKRRGIPLVLVN 153 (419)
T ss_pred -CchHHHHHHHHhcCCCEEE-EEeccccHHHHHHHHHcCCCEEEEe
Confidence 1123445555321 23333 3356889999999999999999765
No 240
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=27.53 E-value=63 Score=36.55 Aligned_cols=52 Identities=21% Similarity=0.418 Sum_probs=38.1
Q ss_pred cCCCcccHhhhhcCCCCceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEcc
Q 003987 261 QAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (781)
Q Consensus 261 ~~p~~~~~~~f~~r~p~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~ 340 (781)
.+|.+..-..|-+..+.-|||+|+...|+. | . .+++.|.++|++|. +++|.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~kVLVtGatG~I-----------G---~-----------~l~~~Ll~~G~~V~----~l~R~ 93 (390)
T PLN02657 43 RATAAAAAQSFRSKEPKDVTVLVVGATGYI-----------G---K-----------FVVRELVRRGYNVV----AVARE 93 (390)
T ss_pred cCCCccccccccccCCCCCEEEEECCCcHH-----------H---H-----------HHHHHHHHCCCEEE----EEEec
Confidence 456667777788887878899998765552 2 1 56677889999998 88776
Q ss_pred C
Q 003987 341 I 341 (781)
Q Consensus 341 ~ 341 (781)
.
T Consensus 94 ~ 94 (390)
T PLN02657 94 K 94 (390)
T ss_pred h
Confidence 3
No 241
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=27.24 E-value=3.6e+02 Score=30.26 Aligned_cols=41 Identities=17% Similarity=0.127 Sum_probs=27.0
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEec
Q 003987 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 396 ~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H 438 (781)
+..++.++ |-.-+..+-.+.|+..|.+.+.....|+....+
T Consensus 165 Ll~Wl~~~--G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ 205 (348)
T PF09752_consen 165 LLHWLERE--GYGPLGLTGISMGGHMAALAASNWPRPVALVPC 205 (348)
T ss_pred HHHHHHhc--CCCceEEEEechhHhhHHhhhhcCCCceeEEEe
Confidence 33444443 444577777888888888888877777655443
No 242
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=27.20 E-value=6.6e+02 Score=26.90 Aligned_cols=35 Identities=26% Similarity=0.433 Sum_probs=23.5
Q ss_pred CCceEEEEcCCC-----------chHHHHHHHHHcCCcEEEEecCC
Q 003987 406 GFPDFIIGNYSD-----------GNLVASLLAYKMGITQCTIAHAL 440 (781)
Q Consensus 406 ~kpDIIh~~~~~-----------~~lva~llar~~gvp~v~t~H~l 440 (781)
.+||+|.+--.. +-..|++=+..+|+|-+..-+..
T Consensus 82 ~~pDLVvSGIN~G~Nlg~dv~ySGTVaaA~Ea~~~GipsIA~S~~~ 127 (252)
T COG0496 82 PRPDLVVSGINAGANLGDDVIYSGTVAAAMEAALLGIPAIAISLAY 127 (252)
T ss_pred CCCCEEEeCccCCCccccceeeeehHHHHHHHHHcCccceeeeehh
Confidence 359999942111 33567777788999998776653
No 243
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=26.77 E-value=28 Score=28.68 Aligned_cols=36 Identities=31% Similarity=0.392 Sum_probs=26.1
Q ss_pred CCCCCcchHHHH---HHHHhHhHHHHHHHHHHHHhcCCc
Q 003987 5 KLSRIPSIRERV---EDTLSVHRNELVSLLSRYVAQGKG 40 (781)
Q Consensus 5 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 40 (781)
.+.|+|+|...+ +....-...+|.+||.+.++.||=
T Consensus 13 ~l~RIh~mLkmf~~~~~~~~~s~~eL~~fL~~lv~e~~L 51 (60)
T PF08672_consen 13 PLDRIHSMLKMFPKDPGGYDISLEELQEFLDRLVEEGKL 51 (60)
T ss_dssp EHHHHHHHHHHH-GGG--TT--HHHHHHHHHHHHHTTSE
T ss_pred CHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHCCcE
Confidence 467889988887 333466778999999999998873
No 244
>TIGR01286 nifK nitrogenase molybdenum-iron protein beta chain. This model represents the majority of known sequences of the nitrogenase molybdenum-iron protein beta subunit. A distinct clade in a phylogenetic tree contains molybdenum-iron, vanadium-iron, and iron-iron forms of nitrogenase beta subunit and is excluded from this model. Nitrogenase, also called dinitrogenase, is responsible for nitrogen fixation. Note: the trusted cutoff score has recently been lowered to include an additional family in which the beta subunit is shorter by about 50 amino acids at the N-terminus. In species with the shorter form of the beta subunit, the alpha subunit has a novel insert of similar length.
Probab=26.29 E-value=1e+03 Score=28.20 Aligned_cols=82 Identities=7% Similarity=-0.008 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHcCCCCcE-----------------EEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHH-
Q 003987 626 EIEKMHELMKTYKLDGQF-----------------RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMT- 687 (781)
Q Consensus 626 ~~~~l~~li~elgL~~~V-----------------~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa- 687 (781)
...+++++.+++|+.-++ .+.| ..+.+++...-...+.+.++|.. +....|.|.
T Consensus 235 d~~eikrlL~~~Gi~~~~l~d~s~~~d~p~~g~~~~~~g----gttleei~~a~~A~~~ivl~~~~----~~~~a~~l~~ 306 (515)
T TIGR01286 235 NFREIKRILSLMGVGYTLLSDPEEVLDTPADGEFRMYAG----GTTLEEMKDAPNAEATVLLQPYT----LRKTKEYIEK 306 (515)
T ss_pred hHHHHHHHHHHcCCCeEEccCccccccCCCCCCccccCC----CCCHHHHHHhhhCcEEEEEchhh----hHHHHHHHHH
Confidence 477899999999996544 1222 35567777755533334444422 445666665
Q ss_pred -cCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHH
Q 003987 688 -CGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFF 729 (781)
Q Consensus 688 -~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l 729 (781)
+|.|.+....+ +-....+++-.+|.+++
T Consensus 307 ~~g~p~~~~~~P--------------iGi~~Td~fL~~la~~~ 335 (515)
T TIGR01286 307 TWKQETPKLNIP--------------LGVKGTDEFLMKVSEIS 335 (515)
T ss_pred HhCCCcccCCCC--------------ccHHHHHHHHHHHHHHH
Confidence 79997654322 11235566666776665
No 245
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=26.13 E-value=3.2e+02 Score=28.28 Aligned_cols=125 Identities=18% Similarity=0.118 Sum_probs=68.4
Q ss_pred cCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCC-cEEEeccccCcCChHHHHH
Q 003987 582 DHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDG-QFRWIAAQTNRARNGELYR 660 (781)
Q Consensus 582 ~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~-~V~flG~~~~~v~~~el~~ 660 (781)
+-.|=+..|..|+.-+... ..-++++||..+. ....+++.++..|..- .=+|+|- ...+..+..
T Consensus 47 dL~kT~~~L~~A~~~i~~~-~~~~ILfVgTk~~-----------~~~~v~k~A~~~g~~~v~~RWlgG---~LTN~~~~~ 111 (204)
T PRK04020 47 DVRKTDERIRIAAKFLSRY-EPEKILVVSSRQY-----------GQKPVQKFAEVVGAKAITGRFIPG---TLTNPSLKG 111 (204)
T ss_pred cHHHHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-----------HHHHHHHHHHHhCCeeecCccCCC---cCcCcchhc
Confidence 3345555666666555443 3457888998764 2345556666655321 1168872 222222322
Q ss_pred HHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCCeEEEECCCC-HHHHHHHHHHHH
Q 003987 661 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYH-PDQAAELMADFF 729 (781)
Q Consensus 661 ~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT-~~gG~~EiI~dg~~G~lv~p~d-~~~lA~~I~~~l 729 (781)
++- =|+.+...-.+ =..++.||.-.|+|||+- |....+..| -+.+|.+| .-.....+..++
T Consensus 112 ~~~--Pdliiv~dp~~-~~~AI~EA~kl~IP~IaivDTn~dp~~V-----dypIP~Ndds~~SI~li~~ll 174 (204)
T PRK04020 112 YIE--PDVVVVTDPRG-DAQAVKEAIEVGIPVVALCDTDNLTSNV-----DLVIPTNNKGRKALALVYWLL 174 (204)
T ss_pred cCC--CCEEEEECCcc-cHHHHHHHHHhCCCEEEEEeCCCCcccC-----ceeECCCCchHHHHHHHHHHH
Confidence 221 33433332211 267899999999999995 566666665 35676554 333334444443
No 246
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=26.11 E-value=1e+02 Score=35.17 Aligned_cols=80 Identities=8% Similarity=-0.020 Sum_probs=49.3
Q ss_pred HHcCCcEEEcCc---cccccccccCCeEEEECC-CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhh
Q 003987 686 MTCGLPTFATCH---GGPAEIIEHGASGFHIDP-YHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGI 761 (781)
Q Consensus 686 Ma~GlPVVaT~~---gG~~EiI~dg~~G~lv~p-~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~i 761 (781)
|+||-.|+.... .-..+.+...+.-+-|.. +|-.++.++|.. +.++++..++|+++|.+.+.+..+.+ ++
T Consensus 234 L~c~SvVl~~~~~~~e~f~~~L~P~vHYVPV~~~~d~sdL~~~v~w----~~~~~~~A~~IA~~g~~f~~~~L~~~--~~ 307 (395)
T PF05686_consen 234 LACNSVVLKVKSPYYEFFYRALKPWVHYVPVKRDDDLSDLEEKVEW----LNAHDDEAQRIAENGQRFAREYLTME--DV 307 (395)
T ss_pred HcCCceEEEeCCcHHHHHHhhhcccccEEEeccccchhhHHHHhhh----cccChHHHHHHHHHHHHHHHHHhhhh--HH
Confidence 555555554321 112223344455555554 467777777744 45899999999999999998776654 45
Q ss_pred ccchHHHHHh
Q 003987 762 VDPSPFVINV 771 (781)
Q Consensus 762 l~~ye~ll~~ 771 (781)
..-|..++++
T Consensus 308 ~~Y~~~LL~e 317 (395)
T PF05686_consen 308 YCYWRRLLLE 317 (395)
T ss_pred HHHHHHHHHH
Confidence 5555555553
No 247
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=25.81 E-value=5.3e+02 Score=25.10 Aligned_cols=107 Identities=13% Similarity=0.128 Sum_probs=60.1
Q ss_pred ceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCC--CCCCCccCcceee
Q 003987 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIP--DAKGTTCNQRLER 355 (781)
Q Consensus 278 ~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p--~~~~~~~~~~~e~ 355 (781)
..+|++|..+.-|. . .-. ..++.|.+.||+|. =+-+... .-.|..+-..+..
T Consensus 16 ~K~IAvVG~S~~P~---------r-----~sy--------~V~kyL~~~GY~Vi----PVNP~~~~~eiLG~k~y~sL~d 69 (140)
T COG1832 16 AKTIAVVGASDKPD---------R-----PSY--------RVAKYLQQKGYRVI----PVNPKLAGEEILGEKVYPSLAD 69 (140)
T ss_pred CceEEEEecCCCCC---------c-----cHH--------HHHHHHHHCCCEEE----eeCcccchHHhcCchhhhcHHh
Confidence 35899998765542 1 222 56778999999987 4433211 2234333344444
Q ss_pred ecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEE
Q 003987 356 VSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQC 434 (781)
Q Consensus 356 v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v 434 (781)
++. .+.|+-+ |++. .++..+.+...+. .+.++.....--|--|.-.++..|+.+|
T Consensus 70 Ipe--~IDiVdv-FR~~------------------e~~~~i~~eal~~---~~kv~W~QlGi~n~ea~~~~~~aG~~vV 124 (140)
T COG1832 70 IPE--PIDIVDV-FRRS------------------EAAPEVAREALEK---GAKVVWLQLGIRNEEAAEKARDAGLDVV 124 (140)
T ss_pred CCC--CCcEEEE-ecCh------------------hhhHHHHHHHHhh---CCCeEEEecCcCCHHHHHHHHHhCcHHH
Confidence 442 4455444 2221 2233334444332 5888888776667777777777776543
No 248
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=25.71 E-value=67 Score=30.68 Aligned_cols=37 Identities=14% Similarity=0.454 Sum_probs=23.8
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEE
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIV 337 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~Vv 337 (781)
|||++|+ |. |...|.... |.+.+++.+.+.|++++ ++
T Consensus 1 Mkilii~--gS---------~r~~~~t~~-------l~~~~~~~l~~~g~e~~----~i 37 (152)
T PF03358_consen 1 MKILIIN--GS---------PRKNSNTRK-------LAEAVAEQLEEAGAEVE----VI 37 (152)
T ss_dssp -EEEEEE--SS---------SSTTSHHHH-------HHHHHHHHHHHTTEEEE----EE
T ss_pred CEEEEEE--Cc---------CCCCCHHHH-------HHHHHHHHHHHcCCEEE----EE
Confidence 7999996 33 333443333 33466777888899998 77
No 249
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=25.51 E-value=7.9e+02 Score=25.70 Aligned_cols=33 Identities=12% Similarity=-0.024 Sum_probs=22.6
Q ss_pred CCCceEEEEc--CCCchHHHHHHHHHcCCcEEEEe
Q 003987 405 QGFPDFIIGN--YSDGNLVASLLAYKMGITQCTIA 437 (781)
Q Consensus 405 ~~kpDIIh~~--~~~~~lva~llar~~gvp~v~t~ 437 (781)
.+..|-|+.. ...+..+...+-+..|+|+|..-
T Consensus 177 ~~~~DaiFiSCTnlRt~eii~~lE~~~G~PVvsSN 211 (238)
T COG3473 177 TPDADAIFISCTNLRTFEIIEKLERDTGVPVVSSN 211 (238)
T ss_pred CCCCCeEEEEeeccccHHHHHHHHHHhCCceeecc
Confidence 4578877743 33345666778888999998653
No 250
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=25.30 E-value=4.6e+02 Score=28.00 Aligned_cols=146 Identities=21% Similarity=0.227 Sum_probs=0.0
Q ss_pred chhhhccCccccccccCCCCCCCCCEEEEEee----ccCCCChHHHHHHHHHhhccCC-CeEEEEEeCcCCCCCCcchHH
Q 003987 549 SIEQLLFDPEQNDEHVGTLSDRSKPIVFSMAR----LDHVKNMTGLVECYGKNSQLRE-LVNLVVVAGYIDVNKSKDREE 623 (781)
Q Consensus 549 ~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGR----L~~~Kgl~~LieA~~~l~~~~~-~v~LvIVG~g~~~~~~~d~ee 623 (781)
.++++|...+-.-.+-..-.+.-+++|+..-. ++-.|=+..|-+|+.-+.+... .-.+++||....
T Consensus 5 sm~~lLeAGvHfGhqtr~wnpkm~~fIf~~RngihIIDL~kT~~~l~~A~~~v~~~~~~~g~ILfVgTK~~--------- 75 (252)
T COG0052 5 SMKQLLEAGVHFGHQTRRWNPKMKPFIFGERNGIHIIDLQKTLERLREAYKFLRRIAANGGKILFVGTKKQ--------- 75 (252)
T ss_pred CHHHHHHcCccccccccccCCcccccceeecCCcEEEEHHHHHHHHHHHHHHHHHHHcCCCEEEEEechHH---------
Q ss_pred HHHHHHHHHHHHHcCC-CCcEEEeccccCcCCh-----HHHHHHH-----------------------------------
Q 003987 624 IAEIEKMHELMKTYKL-DGQFRWIAAQTNRARN-----GELYRYI----------------------------------- 662 (781)
Q Consensus 624 ~~~~~~l~~li~elgL-~~~V~flG~~~~~v~~-----~el~~~l----------------------------------- 662 (781)
..+-+++.+++.|. .=+=||+| +-+.+ ..+.++.
T Consensus 76 --a~~~V~~~A~r~g~~yV~~RwLg---G~LTN~~ti~~si~rl~~lE~~~~~~~~~~tKkE~l~l~re~~kL~k~lgGI 150 (252)
T COG0052 76 --AQEPVKEFAERTGAYYVNGRWLG---GMLTNFKTIRKSIKRLKELEKMEEDGFDGLTKKEALMLTRELEKLEKSLGGI 150 (252)
T ss_pred --HHHHHHHHHHHhCCceecCcccC---ccccCchhHHHHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHHHhhcch
Q ss_pred ------HccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCCeEEEECCCC
Q 003987 663 ------ADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYH 717 (781)
Q Consensus 663 ------a~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT-~~gG~~EiI~dg~~G~lv~p~d 717 (781)
-+ . +||.=...|. .++.||--.|.||||- |+...++.| -+.+|.+|
T Consensus 151 k~m~~~Pd-~-l~ViDp~~e~--iAv~EA~klgIPVvAlvDTn~dpd~V-----D~~IP~Nd 203 (252)
T COG0052 151 KDMKGLPD-V-LFVIDPRKEK--IAVKEANKLGIPVVALVDTNCDPDGV-----DYVIPGND 203 (252)
T ss_pred hhccCCCC-E-EEEeCCcHhH--HHHHHHHHcCCCEEEEecCCCCCccC-----ceeecCCC
No 251
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=25.19 E-value=45 Score=31.08 Aligned_cols=28 Identities=25% Similarity=0.436 Sum_probs=20.5
Q ss_pred cccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEcc
Q 003987 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (781)
Q Consensus 301 ~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~ 340 (781)
++|-..-.+ .|+++|.++||+|. +.|..
T Consensus 8 t~Ghv~P~l--------ala~~L~~rGh~V~----~~~~~ 35 (139)
T PF03033_consen 8 TRGHVYPFL--------ALARALRRRGHEVR----LATPP 35 (139)
T ss_dssp SHHHHHHHH--------HHHHHHHHTT-EEE----EEETG
T ss_pred ChhHHHHHH--------HHHHHHhccCCeEE----Eeecc
Confidence 456555556 68888999999999 88755
No 252
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=25.13 E-value=4.5e+02 Score=26.95 Aligned_cols=100 Identities=7% Similarity=0.079 Sum_probs=60.2
Q ss_pred CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc-CCCCcEEEeccccCcCChHHHHHHH
Q 003987 584 VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY-KLDGQFRWIAAQTNRARNGELYRYI 662 (781)
Q Consensus 584 ~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el-gL~~~V~flG~~~~~v~~~el~~~l 662 (781)
..+.+.+.+.+....+ ++.+++++..... + ..++....++..+++ |.. +..+- ..+.++..+.+
T Consensus 14 ~~~~~~l~~~l~~~~~--~~~~i~~IptAs~-----~--~~~~~~~~~~a~~~l~G~~--~~~~~----~~~~~~~~~~l 78 (212)
T cd03146 14 AHALPAIDDLLLSLTK--ARPKVLFVPTASG-----D--RDEYTARFYAAFESLRGVE--VSHLH----LFDTEDPLDAL 78 (212)
T ss_pred ccchHHHHHHHHHhcc--CCCeEEEECCCCC-----C--HHHHHHHHHHHHhhccCcE--EEEEe----ccCcccHHHHH
Confidence 3455666666665542 4578888887754 2 224566777777777 763 22221 11134556777
Q ss_pred HccCcEEEEcCC--------CCCCcH--HHHHHHHcCCcEEEcCccc
Q 003987 663 ADTKGAFVQPAF--------YEAFGL--TVVEAMTCGLPTFATCHGG 699 (781)
Q Consensus 663 a~aadvfV~PS~--------~E~fGl--tvlEAMa~GlPVVaT~~gG 699 (781)
.. +|++++|-- +...|+ .+-++...|+|++.++.|.
T Consensus 79 ~~-ad~I~l~GG~~~~~~~~l~~~~l~~~l~~~~~~g~~i~G~SAGa 124 (212)
T cd03146 79 LE-ADVIYVGGGNTFNLLAQWREHGLDAILKAALERGVVYIGWSAGS 124 (212)
T ss_pred hc-CCEEEECCchHHHHHHHHHHcCHHHHHHHHHHCCCEEEEECHhH
Confidence 74 999999831 111232 3456667899999997664
No 253
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=25.04 E-value=70 Score=35.14 Aligned_cols=19 Identities=21% Similarity=0.363 Sum_probs=15.7
Q ss_pred HHHHHHHHCCCceeecceEEEcc
Q 003987 318 EMLLRIKRQGLDISPKILIVTRL 340 (781)
Q Consensus 318 eLa~~L~~~GheV~~~v~VvT~~ 340 (781)
.++..|.+.||+|+ ++.+.
T Consensus 16 ~~A~~L~~~G~~V~----~~~r~ 34 (341)
T PRK08229 16 YLGGRLAAAGADVT----LIGRA 34 (341)
T ss_pred HHHHHHHhcCCcEE----EEecH
Confidence 57778899999999 88764
No 254
>CHL00194 ycf39 Ycf39; Provisional
Probab=24.81 E-value=71 Score=34.69 Aligned_cols=33 Identities=12% Similarity=0.418 Sum_probs=25.9
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEcc
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~ 340 (781)
|||+|+...|+. |+ .++++|.++||+|. +++|.
T Consensus 1 MkIlVtGatG~i-----------G~--------------~lv~~Ll~~g~~V~----~l~R~ 33 (317)
T CHL00194 1 MSLLVIGATGTL-----------GR--------------QIVRQALDEGYQVR----CLVRN 33 (317)
T ss_pred CEEEEECCCcHH-----------HH--------------HHHHHHHHCCCeEE----EEEcC
Confidence 689998877763 32 67778899999998 88876
No 255
>PRK10360 DNA-binding transcriptional activator UhpA; Provisional
Probab=24.69 E-value=6.3e+02 Score=24.25 Aligned_cols=75 Identities=19% Similarity=0.266 Sum_probs=50.9
Q ss_pred HHHHHHHHc-cCcEEEEcCC-CCCCcHHHHHHHHcCCcEEEc-Cccccc---cccccCCeEEEECCCCHHHHHHHHHHHH
Q 003987 656 GELYRYIAD-TKGAFVQPAF-YEAFGLTVVEAMTCGLPTFAT-CHGGPA---EIIEHGASGFHIDPYHPDQAAELMADFF 729 (781)
Q Consensus 656 ~el~~~la~-aadvfV~PS~-~E~fGltvlEAMa~GlPVVaT-~~gG~~---EiI~dg~~G~lv~p~d~~~lA~~I~~~l 729 (781)
.+....+.. ..|++++-.. .+.-|..+++.+....||++. ...... +.+..|..|++..|.+.+++.++|..++
T Consensus 37 ~~~l~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~vi~~s~~~~~~~~~~~~~~ga~~~i~kp~~~~~l~~~i~~~~ 116 (196)
T PRK10360 37 REALAGLPGRGVQVCICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 (196)
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHccCCCEEEEECCCCHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHH
Confidence 344444432 2577777543 345577888888778888775 333222 3455688999999999999999998776
Q ss_pred H
Q 003987 730 G 730 (781)
Q Consensus 730 ~ 730 (781)
.
T Consensus 117 ~ 117 (196)
T PRK10360 117 T 117 (196)
T ss_pred c
Confidence 3
No 256
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=24.31 E-value=4.3e+02 Score=26.76 Aligned_cols=31 Identities=26% Similarity=0.335 Sum_probs=23.7
Q ss_pred EEEEcCCCchHHHHHHHHHcCCcEEEEecCC
Q 003987 410 FIIGNYSDGNLVASLLAYKMGITQCTIAHAL 440 (781)
Q Consensus 410 IIh~~~~~~~lva~llar~~gvp~v~t~H~l 440 (781)
++..-++.|++.|.+++.+.++|.|.+.=++
T Consensus 61 ~~liGSSlGG~~A~~La~~~~~~avLiNPav 91 (187)
T PF05728_consen 61 VVLIGSSLGGFYATYLAERYGLPAVLINPAV 91 (187)
T ss_pred eEEEEEChHHHHHHHHHHHhCCCEEEEcCCC
Confidence 4555557778889999999999998775444
No 257
>COG4195 Phage-related replication protein [General function prediction only]
Probab=23.96 E-value=87 Score=31.76 Aligned_cols=61 Identities=25% Similarity=0.255 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHhhcCCCcccHhhhhcCCCCceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHH
Q 003987 246 AEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRI 323 (781)
Q Consensus 246 ~~~~~~~~~~~~~~~~~p~~~~~~~f~~r~p~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L 323 (781)
+++.-....-|.+..++-|+..+.. .+. --+++|++||| ||++--+.++||+++++-+-.|
T Consensus 8 ~~d~y~~f~~Lse~esp~dy~ii~~--e~~--~S~v~ilapHG-------------G~IE~GvSELare~s~e~S~yl 68 (208)
T COG4195 8 AEDEYSNFASLSENESPVDYGIIYT--EKL--GSRVLILAPHG-------------GGIEGGVSELAREFSDEYSGYL 68 (208)
T ss_pred ccccccCHHHHHhccCcccCCeEEe--ecc--CceEEEEeccC-------------CccCccHHHHHHHHHHHHHHHH
Confidence 4444445556666665445554432 111 24799999997 6777778888988877654433
No 258
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=23.62 E-value=1.1e+03 Score=26.48 Aligned_cols=126 Identities=9% Similarity=-0.029 Sum_probs=70.8
Q ss_pred CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHH----HHHHccCcEEEEcC--CC
Q 003987 602 ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELY----RYIADTKGAFVQPA--FY 675 (781)
Q Consensus 602 ~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~----~~la~aadvfV~PS--~~ 675 (781)
.+.+++++|.|.- -+..-+...+.|. .+|.+........+.++++ .+... +|+++..| ..
T Consensus 173 ~~k~vLvIGaGem------------~~l~a~~L~~~g~-~~i~v~nRt~~~~~~~~~~~~~~~~~~~-~DvVIs~t~~Ta 238 (338)
T PRK00676 173 KKASLLFIGYSEI------------NRKVAYYLQRQGY-SRITFCSRQQLTLPYRTVVREELSFQDP-YDVIFFGSSESA 238 (338)
T ss_pred cCCEEEEEcccHH------------HHHHHHHHHHcCC-CEEEEEcCCccccchhhhhhhhhhcccC-CCEEEEcCCcCC
Confidence 4579999999833 2333333334555 4587777554455566655 56665 89999753 22
Q ss_pred CCCcHHHHHHHHcCCcEEEcCcccccccc--ccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 003987 676 EAFGLTVVEAMTCGLPTFATCHGGPAEII--EHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 751 (781)
Q Consensus 676 E~fGltvlEAMa~GlPVVaT~~gG~~EiI--~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~ 751 (781)
-+.+....|.+..-.+-+.-|..-|+++= ....+-.++ |.|++.+.+. .+-..|++....+...+.
T Consensus 239 s~~p~i~~~~~~~~~~r~~iDLAvPRdId~v~~~~~v~Ly---~iDdL~~i~~-------~n~~~R~~~~~~ae~iI~ 306 (338)
T PRK00676 239 YAFPHLSWESLADIPDRIVFDFNVPRTFPWSETPFPHRYL---DMDFISEWVQ-------KHLQCRKEVNNKHKLSLR 306 (338)
T ss_pred CCCceeeHHHHhhccCcEEEEecCCCCCccccccCCcEEE---EhHHHHHHHH-------HHHHHHHHHHHHHHHHHH
Confidence 33455555554432224666777777763 112233344 6666666654 344555665566655553
No 259
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=22.76 E-value=4.8e+02 Score=28.26 Aligned_cols=104 Identities=20% Similarity=0.139 Sum_probs=50.6
Q ss_pred HHHHHHHHCCCceeecceEEEcc-CCC-CCCCccCcceeeecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHH
Q 003987 318 EMLLRIKRQGLDISPKILIVTRL-IPD-AKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTED 395 (781)
Q Consensus 318 eLa~~L~~~GheV~~~v~VvT~~-~p~-~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~ 395 (781)
+|++.|+++|++|. ++... ..+ ..+.......+.......+-|+++|+...++.+..-.+..++.
T Consensus 15 ~~~~~l~~~g~~v~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~i~~~~~~~~~~--------- 81 (287)
T TIGR02853 15 ELIRKLEELDAKIS----LIGFDQLEDGFTGAVKCELLELDLTTLDVVILPVPGTSHDGKVATVFSNEKVV--------- 81 (287)
T ss_pred HHHHHHHHCCCEEE----EEeccccccccccceeecchhhhhccCCEEEECCccccCCceEecccccCCcc---------
Confidence 69999999999998 66432 111 1111111122221222356788888877766433222222221
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEe
Q 003987 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIA 437 (781)
Q Consensus 396 ~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~ 437 (781)
+.+.+.+.+ ++..+.+.......+. .+++..|++++-..
T Consensus 82 l~~~~l~~~--~~~~~~~~G~~~~~l~-~~a~~~gi~v~~~~ 120 (287)
T TIGR02853 82 LTPELLEST--KGHCTIYVGISNPYLE-QLAADAGVKLIELF 120 (287)
T ss_pred ccHHHHHhc--CCCCEEEEecCCHHHH-HHHHHCCCeEEEEE
Confidence 111222222 2333333333332222 37788899987543
No 260
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=22.37 E-value=1.9e+02 Score=30.82 Aligned_cols=61 Identities=13% Similarity=0.040 Sum_probs=40.4
Q ss_pred cCCeEEEECCCCH-HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHhc
Q 003987 706 HGASGFHIDPYHP-DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINVI 772 (781)
Q Consensus 706 dg~~G~lv~p~d~-~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~~ 772 (781)
..+.-+-+..+.. +++.++|..+. .+++..++|+++|++.+.+..+. .++..-|..++++.
T Consensus 188 P~~HYvPv~~d~sd~~l~~~i~~~~----~~~~~a~~Ia~~~~~~~~~~L~~--~~~~~Y~~~ll~ey 249 (256)
T smart00672 188 PWVHYWPIKSDLSCRELKEAVDWGN----EHDKKAQEIGKRGSEFIQQNLSM--EDVYDYMFHLLQEY 249 (256)
T ss_pred CccceEEeeCCCchhhHHHHHHHHH----hCHHHHHHHHHHHHHHHHHHcCH--HHHHHHHHHHHHHH
Confidence 3333444544222 34788886554 89999999999999999876655 45556666666553
No 261
>PRK13934 stationary phase survival protein SurE; Provisional
Probab=22.09 E-value=1e+03 Score=25.71 Aligned_cols=34 Identities=26% Similarity=0.339 Sum_probs=21.7
Q ss_pred CCCceEEEE--cC----------CCchHHHHHHHHHcCCcEEEEec
Q 003987 405 QGFPDFIIG--NY----------SDGNLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 405 ~~kpDIIh~--~~----------~~~~lva~llar~~gvp~v~t~H 438 (781)
..+||+|++ |. ..+-..|++-+...|+|-+..--
T Consensus 82 ~~~pDLViSGIN~G~NlG~d~v~ySGTVgAA~Ea~~~GIPsIAvS~ 127 (266)
T PRK13934 82 GRKYDLVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPAVAYSA 127 (266)
T ss_pred cCCCCeEEecCccCCCCCcCcccccHhHHHHHHHHhcCCCEEEEec
Confidence 458999994 11 11234566677778999886643
No 262
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain. This family of bacterial enzymes is sequence-similar to 4-hydroxy-2-oxovalerate aldolase (HOA) but its exact function is unknown. This family includes the Bacteroides vulgatus Bvu_2661 protein and belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues t
Probab=22.06 E-value=9.8e+02 Score=25.52 Aligned_cols=154 Identities=14% Similarity=0.064 Sum_probs=86.2
Q ss_pred CCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHH
Q 003987 583 HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYI 662 (781)
Q Consensus 583 ~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~l 662 (781)
+.+.++.+.++.+..++..-.+.+-+.-... .+. ++..++-+.+.++|. +.|.+.- ..+.....++++++
T Consensus 104 ~~~~~~~~~~~i~~ak~~G~~v~~~~~~a~~-----~~~---~~~~~~~~~~~~~g~-~~i~l~D-T~G~~~P~~v~~lv 173 (266)
T cd07944 104 HKHEFDEALPLIKAIKEKGYEVFFNLMAISG-----YSD---EELLELLELVNEIKP-DVFYIVD-SFGSMYPEDIKRII 173 (266)
T ss_pred ccccHHHHHHHHHHHHHCCCeEEEEEEeecC-----CCH---HHHHHHHHHHHhCCC-CEEEEec-CCCCCCHHHHHHHH
Confidence 4467888888888777654333333222221 111 334444455566664 3455432 22244455665555
Q ss_pred Hc---cCc--EEEEcCCCCCCcHH---HHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccC
Q 003987 663 AD---TKG--AFVQPAFYEAFGLT---VVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKE 734 (781)
Q Consensus 663 a~---aad--vfV~PS~~E~fGlt---vlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~ 734 (781)
.. ..+ +-+---....+|+. .++|+.+|.=.|-+..+|+.+- .|-. ..++++..+...+. -.-
T Consensus 174 ~~l~~~~~~~~~i~~H~Hn~~Gla~AN~laA~~aGa~~vd~s~~G~G~~-----aGN~----~~E~~v~~l~~~~~-~~~ 243 (266)
T cd07944 174 SLLRSNLDKDIKLGFHAHNNLQLALANTLEAIELGVEIIDATVYGMGRG-----AGNL----PTELLLDYLNNKFG-KKY 243 (266)
T ss_pred HHHHHhcCCCceEEEEeCCCccHHHHHHHHHHHcCCCEEEEecccCCCC-----cCcH----HHHHHHHHHHHhhc-cCC
Confidence 43 222 22222235667776 4899999999999999998872 2211 35566666654432 123
Q ss_pred CHHHHHHHHHHHHHHHHHhcCc
Q 003987 735 NPSHWKKISDGGLKRIYERLVV 756 (781)
Q Consensus 735 dp~~~~~~s~~a~~~~~~~ysw 756 (781)
|.+....+++.-.+.+.++|.|
T Consensus 244 dl~~l~~~~~~~~~~~~~~~~w 265 (266)
T cd07944 244 NLEPVLELIDEYIAPLKKKYEW 265 (266)
T ss_pred CHHHHHHHHHHHHHHHHhccCC
Confidence 5555666666666677778888
No 263
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=21.98 E-value=2.2e+02 Score=31.00 Aligned_cols=118 Identities=20% Similarity=0.330 Sum_probs=67.3
Q ss_pred hHHHHHhhcccCCeeeecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCccccCCcH------------
Q 003987 179 PLLDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTA------------ 246 (781)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gwg~~~------------ 246 (781)
.+|.-||... .+.|+-.=-|+.+|+..|..... .. .+ +.+.-.++..||..|=-..|
T Consensus 123 ~~L~~lr~~A----d~vIDTs~l~~~~Lr~~i~~~~~--~~----~~-~~l~v~i~SFGfK~GiP~dAD~VfDvRfLpNP 191 (284)
T PF03668_consen 123 ELLEPLRERA----DLVIDTSNLSVHQLRERIRERFG--GD----KE-SRLTVTIQSFGFKYGIPPDADLVFDVRFLPNP 191 (284)
T ss_pred HHHHHHHHhC----CEEEECCCCCHHHHHHHHHHHhc--cC----CC-CceEEEEEEeccccCCCCCCCEEEEcCcCCCC
Confidence 3445555443 35666666677888877776432 11 11 23444566666644432222
Q ss_pred -----------------------HHHHHHHHHHHHhhcCCCcccHhhhhcCCCCceeEEEEccCcCCcccccCCCCCccc
Q 003987 247 -----------------------EHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGG 303 (781)
Q Consensus 247 -----------------------~~~~~~~~~~~~~~~~p~~~~~~~f~~r~p~~mrI~ivS~h~~~~~~~vlg~p~~GG 303 (781)
.-+.|.+..+.++++. .++.|..+-..-+.|+|=| |||
T Consensus 192 ~y~~~Lr~lTG~D~~V~~yv~~~~~~~~f~~~~~~~l~~----~lp~y~~egk~~ltIaiGC---------------TGG 252 (284)
T PF03668_consen 192 YYVPELRPLTGLDKPVQDYVLSDPEAQEFLEKIEDLLDF----LLPRYEKEGKSYLTIAIGC---------------TGG 252 (284)
T ss_pred CCChhhhhcCCCChHHHHHHHcChhHHHHHHHHHHHHHH----HHHHHHhcCCceEEEEEEc---------------CCC
Confidence 2233444444444432 3444444444345566544 799
Q ss_pred ceeehHHHHHHHHHHHHHHHHHCCCcee
Q 003987 304 QVVYILDQVRALENEMLLRIKRQGLDIS 331 (781)
Q Consensus 304 ~~vyvld~araL~~eLa~~L~~~GheV~ 331 (781)
+.+.|. +.+.|+++|.+.|+.|.
T Consensus 253 ~HRSV~-----iae~La~~L~~~~~~v~ 275 (284)
T PF03668_consen 253 QHRSVA-----IAERLAERLREKGYTVV 275 (284)
T ss_pred cCcHHH-----HHHHHHHHHHhcCCcce
Confidence 999887 55688999999999887
No 264
>PF04844 Ovate: Transcriptional repressor, ovate; InterPro: IPR006458 This group of sequences contain an uncharacterised domain of about 70 residues found exclusively in plants, generally toward the C terminus of proteins of 200 to 350 amino acids in length. At least 14 such proteins are found in Arabidopsis thaliana (Mouse-ear cress). Other regions of these proteins tend to consist largely of low-complexity sequence. Function is not known.
Probab=21.70 E-value=1.3e+02 Score=24.90 Aligned_cols=45 Identities=16% Similarity=0.307 Sum_probs=33.9
Q ss_pred cchHHHHHHHHhHhHHHHHHHHHHHHhcCCcccchhhHHHHHHhhh
Q 003987 10 PSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIF 55 (781)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 (781)
.||.|.+.+---...++|..+|..|.+...+ =.+.-|+.+|.+++
T Consensus 10 ~SM~EMI~~~~i~~~~~LeeLL~cYL~LN~~-~~H~~Iv~aF~dv~ 54 (59)
T PF04844_consen 10 ESMVEMIEENGIRDWDDLEELLACYLSLNSP-EHHKFIVEAFVDVW 54 (59)
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHhCCh-hhhhHHHHHHHHHH
Confidence 4788887777666889999999999887665 12344788888876
No 265
>PRK05331 putative phosphate acyltransferase; Provisional
Probab=21.24 E-value=1.1e+03 Score=26.06 Aligned_cols=52 Identities=10% Similarity=-0.001 Sum_probs=38.4
Q ss_pred ccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC-CcEEEec
Q 003987 581 LDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD-GQFRWIA 647 (781)
Q Consensus 581 L~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~-~~V~flG 647 (781)
+.-..+....+++..+..+..+.+.++++|+. +.+++.++++++. +++.++-
T Consensus 9 mGgD~~p~~vl~aa~~a~~~~~~~~~iLvG~~---------------~~I~~~l~~~~~~~~~~~Iv~ 61 (334)
T PRK05331 9 MGGDFGPEVVVPGALQALKEHPDLEIILVGDE---------------EKIKPLLAKKPDLKERIEIVH 61 (334)
T ss_pred CCCccCHHHHHHHHHHHHhcCCCeEEEEEeCH---------------HHHHHHHHhcCCCcCCcEEEe
Confidence 45578889999998887777667999999975 3566677776652 4577764
No 266
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
Probab=21.23 E-value=1e+03 Score=27.78 Aligned_cols=108 Identities=17% Similarity=0.210 Sum_probs=72.1
Q ss_pred eEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHcc-CcEEEEcCC-CCCCcHH
Q 003987 604 VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADT-KGAFVQPAF-YEAFGLT 681 (781)
Q Consensus 604 v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~a-advfV~PS~-~E~fGlt 681 (781)
.+++||-+..+ ....+....+..|. .|+... +..+....+... .|+++.=-+ -+.-|+.
T Consensus 5 ~~iLvVDDd~~-----------ir~~l~~~L~~~G~--~v~~a~------~~~~al~~i~~~~~~lvl~Di~mp~~~Gl~ 65 (464)
T COG2204 5 ARILVVDDDPD-----------IRELLEQALELAGY--EVVTAE------SAEEALEALSESPFDLVLLDIRMPGMDGLE 65 (464)
T ss_pred CCEEEEeCCHH-----------HHHHHHHHHHHcCC--eEEEeC------CHHHHHHHHhcCCCCEEEEecCCCCCchHH
Confidence 35677766643 34455555565553 344443 345667777653 355555333 3667899
Q ss_pred HHHHHHc---CCcEEE-cCccccc---cccccCCeEEEECCCCHHHHHHHHHHHHH
Q 003987 682 VVEAMTC---GLPTFA-TCHGGPA---EIIEHGASGFHIDPYHPDQAAELMADFFG 730 (781)
Q Consensus 682 vlEAMa~---GlPVVa-T~~gG~~---EiI~dg~~G~lv~p~d~~~lA~~I~~~l~ 730 (781)
+++.+.. ++|||. |.+|... +-+..|-.-|+..|-|++.+...+.+.++
T Consensus 66 ll~~i~~~~~~~pVI~~Tg~g~i~~AV~A~k~GA~Dfl~KP~~~~~L~~~v~ral~ 121 (464)
T COG2204 66 LLKEIKSRDPDLPVIVMTGHGDIDTAVEALRLGAFDFLEKPFDLDRLLAIVERALE 121 (464)
T ss_pred HHHHHHhhCCCCCEEEEeCCCCHHHHHHHHhcCcceeeeCCCCHHHHHHHHHHHHH
Confidence 8887766 799987 6777644 44557888899999999999999988873
No 267
>PLN02327 CTP synthase
Probab=21.20 E-value=9.1e+02 Score=28.93 Aligned_cols=107 Identities=14% Similarity=0.236 Sum_probs=64.4
Q ss_pred ChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCCh----------
Q 003987 586 NMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARN---------- 655 (781)
Q Consensus 586 gl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~---------- 655 (781)
++..--+...++.+....+++-+||....-. ..+....+.|......++..=.+.|+.... +..
T Consensus 280 ~~~~W~~~~~~~~~~~~~v~IalVGKY~~l~----DAY~Si~eAL~hA~~~~~~~v~i~wI~se~--l~~~~~~~~~~~y 353 (557)
T PLN02327 280 DLEEWTARAESCDNLTEPVRIAMVGKYTGLS----DSYLSVLKALLHASVACSRKLVIDWVAASD--LEDETAKETPDAY 353 (557)
T ss_pred ChHHHHHHHHHHhCCCCceEEEEEecccCCc----HhHHHHHHHHHHHHHHcCCeeEEEEEchhh--cCCcccccccchh
Confidence 3443333444444333469999999875421 134455666766677777777888986422 111
Q ss_pred HHHHHHHHccCcEEEEcCCC-----CCCcHHHHHHHHcCCcEEEcCccc
Q 003987 656 GELYRYIADTKGAFVQPAFY-----EAFGLTVVEAMTCGLPTFATCHGG 699 (781)
Q Consensus 656 ~el~~~la~aadvfV~PS~~-----E~fGltvlEAMa~GlPVVaT~~gG 699 (781)
..+...+.+ +|.+|+|.-+ |+.-..+-.|...|+|++..+.|-
T Consensus 354 ~~~~~~L~~-~DGIvvpGGfG~~~~~G~i~ai~~are~~iP~LGIClGm 401 (557)
T PLN02327 354 AAAWKLLKG-ADGILVPGGFGDRGVEGKILAAKYARENKVPYLGICLGM 401 (557)
T ss_pred hhhHHhhcc-CCEEEeCCCCCCcccccHHHHHHHHHHcCCCEEEEcHHH
Confidence 113455775 8888888632 222234455667899999998774
No 268
>cd01972 Nitrogenase_VnfE_like Nitrogenase_VnfE_like: VnfE subunit of the VnfEN complex_like. This group in addition to VnfE contains a subset of the alpha subunit of the nitrogenase MoFe protein and NifE-like proteins. The nitrogenase enzyme system catalyzes the ATP-dependent reduction of dinitrogen to ammonia. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of MoFe protein of the molybdenum(Mo)-nitrogenase. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to NifEN where it is further processed to FeMoco. VnfEN may similarly be a scaffolding protein for the iron-vanadium cofactor (FeVco) of the vanadium-dependent (V)-nitrogenase. NifE and NifN are essential for the Mo-nitrogenase, VnfE and VnfN are not essential for the V-nitrogenase. NifE and NifN can substitute when the vnfEN genes are inactivated.
Probab=21.17 E-value=9.5e+02 Score=27.43 Aligned_cols=100 Identities=13% Similarity=0.151 Sum_probs=59.3
Q ss_pred CCChHHHHHHHHHhh-cc----CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHH
Q 003987 584 VKNMTGLVECYGKNS-QL----RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGEL 658 (781)
Q Consensus 584 ~Kgl~~LieA~~~l~-~~----~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el 658 (781)
..|.+..++++.+.. .. .+.-.+-|+|....+ |+.......+++++.+++|+.-+..|.| ..+.+++
T Consensus 137 ~~G~~~a~~al~~~~~~~~~~~~~~~~VNliG~~~~~----~~~~~~d~~ei~~lL~~~Gi~v~~~~~~----~~~~~ei 208 (426)
T cd01972 137 RSGFDAAFHGILRHLVPPQDPTKQEDSVNIIGLWGGP----ERTEQEDVDEFKRLLNELGLRVNAIIAG----GCSVEEL 208 (426)
T ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCCEEEEccCCCc----cccccccHHHHHHHHHHcCCeEEEEeCC----CCCHHHH
Confidence 467777777665422 11 111134455665331 1111234678999999999988888876 3456777
Q ss_pred HHHHHccCcEEEEcCCCCCCcHHHHHHH--HcCCcEEEc
Q 003987 659 YRYIADTKGAFVQPAFYEAFGLTVVEAM--TCGLPTFAT 695 (781)
Q Consensus 659 ~~~la~aadvfV~PS~~E~fGltvlEAM--a~GlPVVaT 695 (781)
.+.-. |.+-|..+. .+|..+.+.| -+|+|.+..
T Consensus 209 ~~~~~--A~lniv~~~--~~g~~~a~~Lee~~GiP~~~~ 243 (426)
T cd01972 209 ERASE--AAANVTLCL--DLGYYLGAALEQRFGVPEIKA 243 (426)
T ss_pred Hhccc--CCEEEEECh--hHHHHHHHHHHHHhCCCeEec
Confidence 76433 444443322 2567888888 589998864
No 269
>PRK05380 pyrG CTP synthetase; Validated
Probab=21.01 E-value=8.1e+02 Score=29.19 Aligned_cols=99 Identities=14% Similarity=0.259 Sum_probs=58.0
Q ss_pred HHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcC
Q 003987 594 YGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 673 (781)
Q Consensus 594 ~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS 673 (781)
..++......+++-+||....-.+ .+....+.|+....+.+..=.+.|+.... +..+.....+.+ .|.+++|-
T Consensus 279 ~~~~~~~~~~v~IalVGKY~~l~D----aY~Sv~eAL~hag~~~~~~v~i~wIdse~--l~~~~~~~~L~~-~DGIIlpG 351 (533)
T PRK05380 279 VERLKNPKGEVTIALVGKYVELPD----AYKSVIEALKHAGIANDVKVNIKWIDSED--LEEENVAELLKG-VDGILVPG 351 (533)
T ss_pred HHHHhCCCCceEEEEEeCccCCcH----HHHHHHHHHHHHHHHcCCeeEEEEEChhh--ccCcchhhHhhc-CCEEEecC
Confidence 333333334699999999754222 23344555655555556555677876211 122123456775 88888875
Q ss_pred CC-----CCCcHHHHHHHHcCCcEEEcCccc
Q 003987 674 FY-----EAFGLTVVEAMTCGLPTFATCHGG 699 (781)
Q Consensus 674 ~~-----E~fGltvlEAMa~GlPVVaT~~gG 699 (781)
-+ ++.-..+-+|...|+|+++.|.|-
T Consensus 352 GfG~~~~~g~i~~i~~a~e~~iPiLGIClGm 382 (533)
T PRK05380 352 GFGERGIEGKILAIRYARENNIPFLGICLGM 382 (533)
T ss_pred CCCccccccHHHHHHHHHHCCCcEEEEchHH
Confidence 22 222224566778899999998665
No 270
>COG1879 RbsB ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]
Probab=20.99 E-value=5.1e+02 Score=27.89 Aligned_cols=46 Identities=20% Similarity=0.270 Sum_probs=34.3
Q ss_pred HHHHHHHccCc-EEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccc
Q 003987 657 ELYRYIADTKG-AFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE 702 (781)
Q Consensus 657 el~~~la~aad-vfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~E 702 (781)
.+-..+++..| +.|.|.-.+++.-.+-+|...|+|||+-+......
T Consensus 83 ~i~~~ia~~~daIiv~~~d~~~~~~~v~~a~~aGIpVv~~d~~~~~~ 129 (322)
T COG1879 83 QIEDLIAQGVDAIIINPVDPDALTPAVKKAKAAGIPVVTVDSDIPGP 129 (322)
T ss_pred HHHHHHHcCCCEEEEcCCChhhhHHHHHHHHHCCCcEEEEecCCCCC
Confidence 44555554555 55557778888999999999999999998765543
No 271
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=20.96 E-value=3.3e+02 Score=28.98 Aligned_cols=88 Identities=16% Similarity=0.152 Sum_probs=55.8
Q ss_pred HHHHHHccCcEEEEcC-CCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCH
Q 003987 658 LYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENP 736 (781)
Q Consensus 658 l~~~la~aadvfV~PS-~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp 736 (781)
-..-+++ ||++|.-- -+|+|=-.+++.+ .+.+++....++..+- ....-.++.+|.+...+++.|.+.| +..||
T Consensus 46 d~~~l~~-ADliv~~G~~lE~~~~k~~~~~-~~~~v~~~~~~~~~~~-~~~dPH~Wldp~n~~~~a~~I~~~L--~~~dP 120 (264)
T cd01020 46 DAAKVST-ADIVVYNGGGYDPWMTKLLADT-KDVIVIAADLDGHDDK-EGDNPHLWYDPETMSKVANALADAL--VKADP 120 (264)
T ss_pred HHHHHhh-CCEEEEeCCCchHHHHHHHHhc-CCceEEeeecccccCC-CCCCCceecCHhHHHHHHHHHHHHH--HHhCc
Confidence 3444554 78777754 3566655666655 4556666544432110 1124567889999999999999988 44678
Q ss_pred HHHHHHHHHHHHHH
Q 003987 737 SHWKKISDGGLKRI 750 (781)
Q Consensus 737 ~~~~~~s~~a~~~~ 750 (781)
+......+++.+..
T Consensus 121 ~~~~~y~~N~~~~~ 134 (264)
T cd01020 121 DNKKYYQANAKKFV 134 (264)
T ss_pred ccHHHHHHHHHHHH
Confidence 77777777766655
No 272
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=20.95 E-value=8.8e+02 Score=24.56 Aligned_cols=88 Identities=6% Similarity=0.026 Sum_probs=55.6
Q ss_pred CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcC--------
Q 003987 602 ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA-------- 673 (781)
Q Consensus 602 ~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS-------- 673 (781)
...+++++.....+ ..++.+.+.+..+++|........-. ....+++.+.+.. +|+++++-
T Consensus 28 ~~~~i~~iptA~~~-------~~~~~~~~~~~~~~lG~~~~~~~~~~---~~~~~~~~~~l~~-ad~I~~~GG~~~~~~~ 96 (210)
T cd03129 28 AGARVLFIPTASGD-------RDEYGEEYRAAFERLGVEVVHLLLID---TANDPDVVARLLE-ADGIFVGGGNQLRLLS 96 (210)
T ss_pred CCCeEEEEeCCCCC-------hHHHHHHHHHHHHHcCCceEEEeccC---CCCCHHHHHHHhh-CCEEEEcCCcHHHHHH
Confidence 35678888776541 12445677778888887542222211 1345788888995 88888863
Q ss_pred CCCC--CcHHHHHHHHcCCcEEEcCcccc
Q 003987 674 FYEA--FGLTVVEAMTCGLPTFATCHGGP 700 (781)
Q Consensus 674 ~~E~--fGltvlEAMa~GlPVVaT~~gG~ 700 (781)
.+.. .--.+.+....|+|++.+..|..
T Consensus 97 ~l~~t~~~~~i~~~~~~G~v~~G~SAGA~ 125 (210)
T cd03129 97 VLRETPLLDAILKRVARGVVIGGTSAGAA 125 (210)
T ss_pred HHHhCChHHHHHHHHHcCCeEEEcCHHHH
Confidence 1222 22357888889999999876653
No 273
>cd01967 Nitrogenase_MoFe_alpha_like Nitrogenase_MoFe_alpha_like: Nitrogenase MoFe protein, alpha subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. Three genetically distinct types of nitrogenase systems are known to exist: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). This group contains the alpha subunit of component 1 of all three different forms. The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. The role of the delta subunit is unknown. For MoFe, each alphabeta pair of subunits contains one
Probab=20.62 E-value=1.2e+03 Score=26.10 Aligned_cols=115 Identities=10% Similarity=0.048 Sum_probs=66.1
Q ss_pred CCCChHHHHHHHHHhh-cc-----CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChH
Q 003987 583 HVKNMTGLVECYGKNS-QL-----RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNG 656 (781)
Q Consensus 583 ~~Kgl~~LieA~~~l~-~~-----~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~ 656 (781)
...|.+..++++.+.. .. .+.-.+-|+|....+ ....+++++.++.|+.-+..|.| ..+.+
T Consensus 134 ~~~G~~~a~~al~~~l~~~~~~~~~~~~~VNiig~~~~~---------~d~~el~~lL~~~Gi~~~~~~~~----~~~~~ 200 (406)
T cd01967 134 QSLGHHIANDAILDHLVGTKEPEEKTPYDVNIIGEYNIG---------GDAWVIKPLLEELGIRVNATFTG----DGTVD 200 (406)
T ss_pred ccHHHHHHHHHHHHHhcCCCCcCCCCCCeEEEEeccccc---------hhHHHHHHHHHHcCCEEEEEeCC----CCCHH
Confidence 3556776776655432 11 123346667764321 23678899999999988777876 34567
Q ss_pred HHHHHHHccCcEEEEcCCCCCCcHHHHHHHH--cCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHH
Q 003987 657 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMT--CGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFF 729 (781)
Q Consensus 657 el~~~la~aadvfV~PS~~E~fGltvlEAMa--~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l 729 (781)
++.+ +.+ |.+-|..+. .+|....+.|. .|.|.+.... +...+.+++-+.|.+++
T Consensus 201 ~i~~-~~~-A~~niv~~~--~~~~~~a~~L~~r~GiP~~~~~p---------------~G~~~t~~~l~~l~~~l 256 (406)
T cd01967 201 ELRR-AHR-AKLNLVHCS--RSMNYLAREMEERYGIPYMEVNF---------------YGFEDTSESLRKIAKFF 256 (406)
T ss_pred HHhh-Ccc-CCEEEEECh--HHHHHHHHHHHHhhCCCEEEecC---------------CcHHHHHHHHHHHHHHh
Confidence 7776 332 444443322 23555555553 7899875221 12235566666666665
No 274
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=20.40 E-value=9.2e+02 Score=25.28 Aligned_cols=98 Identities=13% Similarity=0.056 Sum_probs=49.5
Q ss_pred CCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc---EEEec-cccCcCChHHH
Q 003987 583 HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ---FRWIA-AQTNRARNGEL 658 (781)
Q Consensus 583 ~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~---V~flG-~~~~~v~~~el 658 (781)
...|...+++.+++ . .+++.|+-+++. ..+....+.+++.+. ..+.+ ......|..++
T Consensus 102 ~~pg~~elL~~L~~---~--g~~l~I~T~~~~-------------~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~ 163 (267)
T PRK13478 102 PIPGVLEVIAALRA---R--GIKIGSTTGYTR-------------EMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWM 163 (267)
T ss_pred CCCCHHHHHHHHHH---C--CCEEEEEcCCcH-------------HHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHH
Confidence 35566666666543 1 477777766543 223333344333221 22222 11123456666
Q ss_pred HHHHHccCcEEEE-cCC---CCCCcHHHHHHHHcCCcEEEcCcccc
Q 003987 659 YRYIADTKGAFVQ-PAF---YEAFGLTVVEAMTCGLPTFATCHGGP 700 (781)
Q Consensus 659 ~~~la~aadvfV~-PS~---~E~fGltvlEAMa~GlPVVaT~~gG~ 700 (781)
+....+..+ +. |+. .+--..=+.=|-++|+++|+-..|+.
T Consensus 164 ~~~a~~~l~--~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~ 207 (267)
T PRK13478 164 ALKNAIELG--VYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGN 207 (267)
T ss_pred HHHHHHHcC--CCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcc
Confidence 655543222 22 221 23334446667899999999876654
Done!