BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 003989
         (781 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O74555|BBP_SCHPO Branchpoint-bridging protein OS=Schizosaccharomyces pombe (strain
           972 / ATCC 24843) GN=bpb1 PE=1 SV=1
          Length = 587

 Score = 90.1 bits (222), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 111/238 (46%), Gaps = 26/238 (10%)

Query: 47  KKNDAINEEEKASSNDDGKKVVRKTKWG----------PDLSLDASVKRGRAL------A 90
           K N  ++       +  G++  RK  WG            + L+ +VK    +      +
Sbjct: 47  KSNSRMDHRPDGYHDGRGRRAYRKHYWGHPTPIEEMLPSQMELETAVKSCMTMEQLELYS 106

Query: 91  YQTRVDQIVQQLESGSL---EAEENQVPEVAAQNADQKSPNPQVDREKLECLELEKQEVI 147
              R+++I Q+L +G +     E +  P     N  ++    ++  +K   LE E+  +I
Sbjct: 107 LNVRLEEITQKLRTGDVVPHHRERSPSPPPQYDNHGRRLNTREIRYKKK--LEDERHRII 164

Query: 148 GEILKLNPSYRTPPDYK-PLLKEAVVPIPVKEYPGYNFLGLIFGPASDTQKRLEKETRTV 206
              +K+ P +R P DY+ P   +  V +PVK+YP  NF+GL+ GP   T K +E ++   
Sbjct: 165 ERAMKMVPGFRAPSDYRRPAKTQEKVYVPVKDYPEINFIGLLIGPRGHTLKDMEAKSGAK 224

Query: 207 IKVYGTKADTGEKVEISTSDANVQSTYEE-FHISISADSYEKVDAATDLIELLVTSVS 263
           I + G  +    K     SD +V+   EE  H  ++ADS +K++ A  LI+ ++ + +
Sbjct: 225 IAIRGKGSVKEGK---GRSDPSVRGNMEEDLHCLVTADSEDKINHAIKLIDNVIQTAA 279


>sp|Q54BM5|BBP_DICDI Branchpoint-bridging protein OS=Dictyostelium discoideum GN=sf1
           PE=3 SV=1
          Length = 501

 Score = 84.0 bits (206), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 96/184 (52%), Gaps = 23/184 (12%)

Query: 88  ALAYQTRVDQIVQQLESGSLEAEENQV------PEVAAQNADQKSPNPQVDREKLECLEL 141
           AL  + RVD+I +++  G +E  E         P     N  + +   Q  +EKL+    
Sbjct: 94  ALILRLRVDEITKKITIGPIEFTERDRERSPSPPPTYDNNGKRSNTREQRIKEKLQ---K 150

Query: 142 EKQEVIGEILKLNPSYRTPPDYKP--LLKEAVVPIPVKEYPGYNFLGLIFGPASDTQKRL 199
           E+ +++    ++NP+Y+ P DY+P    K   + IP+K +P YNF+GLI GP  +TQKR+
Sbjct: 151 ERHQLVVTAQQINPTYKPPSDYQPPNEKKTRKIYIPIKNHPEYNFIGLIIGPRGNTQKRM 210

Query: 200 EKETRTVIKVYGTKADTG---EKVEISTSDANVQSTYEEFHISISADSYEKVDAATDLI- 255
           EKE+   I + G  +       K++   +D        E H+ ++AD+ +++D A  L+ 
Sbjct: 211 EKESGAKIAIRGKGSSRDGKPTKLQFQEND--------ELHVLLTADTVDQLDKAEVLVR 262

Query: 256 ELLV 259
           E L+
Sbjct: 263 EFLI 266


>sp|Q4P0H7|BBP_USTMA Branchpoint-bridging protein OS=Ustilago maydis (strain 521 / FGSC
           9021) GN=BBP PE=3 SV=1
          Length = 625

 Score = 79.0 bits (193), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 106/246 (43%), Gaps = 23/246 (9%)

Query: 69  RKTKWGPD---------LSLDASVKRGRALAYQTRVDQIVQQLESGSL---EAEENQVPE 116
           RK++WG           +  + S +     A Q R+D+I ++L SG     + E +  P 
Sbjct: 135 RKSRWGDANDKITIPTAIGANVSAQELDKYAIQVRLDEISRKLRSGDFVPPDRERSPSPP 194

Query: 117 VAAQNADQKSPNPQVDREKLECLELEKQEVIGEILKLNPSYRTPPDYKPLLKE----AVV 172
               N  +++   +V   K   LE E+  ++   LKL+P++R P DY  + +       V
Sbjct: 195 PTYDNQGRRTNTREVRYRKK--LEDERVALVDRQLKLDPNFRPPSDYHAIKRNQRPTEKV 252

Query: 173 PIPVKEYPGYNFLGLIFGPASDTQKRLEKETRTVIKVYGTKADTGEKVEISTSDANVQST 232
            +P+KE+P   F GL+ GP  +T K +E+++   I + G  +     V+      +    
Sbjct: 253 YLPIKEFPEIKFFGLLVGPRGNTLKTMERQSGAKISIRGKGS-----VKTGKGKMDADED 307

Query: 233 YEEFHISISADSYEKVDAATDLIELLVTSVSGSLAAISTSTLVSGENVSALNQSQGDGAQ 292
            EE H  ++AD    V     LI  ++ + + +    +         ++ALN +  D   
Sbjct: 308 EEEMHCVVTADDEASVKKCIKLINQVIETAASTPEGENDHKRNQLRELAALNGTLRDDEN 367

Query: 293 FLVPNT 298
            L  N 
Sbjct: 368 QLCKNC 373


>sp|Q8NIW7|BBP_NEUCR Branchpoint-bridging protein OS=Neurospora crassa (strain ATCC
           24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
           GN=bpb-1 PE=3 SV=1
          Length = 607

 Score = 77.8 bits (190), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 105/230 (45%), Gaps = 47/230 (20%)

Query: 88  ALAYQTRVDQIVQQLESGSLEAEENQVPEVAAQNADQK-SPNPQVD-------------R 133
           A     R+++I Q+L          ++ +V   + D+  SP PQ D             R
Sbjct: 114 AYTLHLRIEEITQKL----------KIDDVVPADGDRSPSPAPQYDNHGRRVNTREYRYR 163

Query: 134 EKLECLELEKQEVIGEILKLNPSYRTPPDYK-PLLKEAVVPIPVKEYPGYNFLGLIFGPA 192
           +KLE    E+ ++I + +K  P+Y  P DY+ P   +  V +PV +YP  NF+GL+ GP 
Sbjct: 164 KKLE---DERHKLIEKAMKTIPNYHPPSDYRRPTKTQEKVYVPVNDYPEINFIGLLIGPR 220

Query: 193 SDTQKRLEKETRTVIKVYGTKADTGEKVEISTSDANVQSTYEE-FHISISADSYEKVDAA 251
            +T K++E E+   I + G  +    K     SDA   S  EE  H  I AD+ EKV+ A
Sbjct: 221 GNTLKKMETESGAKIAIRGKGS---VKEGKGRSDAAHSSNQEEDLHCLIMADTEEKVNKA 277

Query: 252 TDLIELLVTSVSG--------------SLAAISTSTLVSGENVSALNQSQ 287
             LI  ++ + +                LAA++  TL   EN +  N  Q
Sbjct: 278 KKLIHNIIETAASIPEGQNELKRNQLRELAALN-GTLRDDENQACQNCGQ 326


>sp|Q6C187|BBP_YARLI Branchpoint-bridging protein OS=Yarrowia lipolytica (strain CLIB
           122 / E 150) GN=BBP PE=3 SV=1
          Length = 605

 Score = 75.9 bits (185), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 30/228 (13%)

Query: 59  SSNDDGKKV---VRKTKWGPDLSLDASV-------------KRGRALAYQTRVDQIVQQL 102
           + +DDG K     RK +W    +  A +             ++  A A   R+++I QQL
Sbjct: 52  TRHDDGTKRQPGRRKQRWSHGENKVADLLQMPTALTGHLTPEQAEAYAIYYRIEEISQQL 111

Query: 103 ESGSLEAEENQV-----PEVAAQNADQKSPNPQVDREKLECLELEKQEVIGEILKLNPSY 157
             G +   E++      P+  +      + + +  R+    LE E+  +I    +L P+Y
Sbjct: 112 RLGDIVPPEDERSPSPPPQYDSMGKRTNTRDARYTRQ----LEEERHRLIERAQRLIPNY 167

Query: 158 RTPPDY-KPLLKEAVVPIPVKEYPGYNFLGLIFGPASDTQKRLEKETRTVIKVYGTKADT 216
           R P DY KP   + VV IPV EYP  NF+G + G    T K++E+E+   I + G  +  
Sbjct: 168 RPPVDYHKPAKTQEVVYIPVNEYPDINFIGQLLGARGKTLKKMEQESGAKICIRGRGSVK 227

Query: 217 GEKVEISTSDANVQSTYE-EFHISISADSYEKVDAATDLIELLVTSVS 263
             K     +D   QST E + H  I ++  EK+  A  L++ ++ + +
Sbjct: 228 QGK---GRTDIPFQSTAEDDLHCLIISEDEEKIARAVQLVQQVIDTAA 272


>sp|Q4WXV6|BBP_ASPFU Branchpoint-bridging protein OS=Neosartorya fumigata (strain ATCC
           MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=bbp PE=3
           SV=1
          Length = 566

 Score = 74.7 bits (182), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 39/226 (17%)

Query: 88  ALAYQTRVDQIVQQLESGSLEAEENQVPEVAAQNADQK-SPNPQVD--------REKL-- 136
           A     R+++I Q+L          ++ +V   + D+  SP PQ D        RE    
Sbjct: 99  AYTLHLRIEEISQKL----------RINDVVPADGDRSPSPPPQYDNFGRRVNTREYRYR 148

Query: 137 ECLELEKQEVIGEILKLNPSYRTPPDYK-PLLKEAVVPIPVKEYPGYNFLGLIFGPASDT 195
           + LE E+ +++ + +K  P+Y  P DY+ P   +  V +PV +YP  NF+GL+ GP  +T
Sbjct: 149 KRLEDERHKLVEKAMKTIPNYHPPSDYRRPTKTQEKVYVPVNDYPEINFIGLLIGPRGNT 208

Query: 196 QKRLEKETRTVIKVYGTKADTGEKVEISTSDANVQSTYEEFHISISADSYEKVDAATDLI 255
            K++E E+   I + G  +    K     + A+ Q   E+ H  I AD+ EKV+ A  L+
Sbjct: 209 LKKMEAESGAKIAIRGKGSVKEGKGRSDAAHASNQE--EDLHCLIMADTEEKVNKAKKLV 266

Query: 256 ELLVTSVSG--------------SLAAISTSTLVSGENVSALNQSQ 287
             ++ + +                LAA++  TL   EN +  N  Q
Sbjct: 267 HNVIETAASIPEGQNELKRNQLRELAALN-GTLRDDENQACQNCGQ 311


>sp|Q64213|SF01_MOUSE Splicing factor 1 OS=Mus musculus GN=Sf1 PE=1 SV=6
          Length = 653

 Score = 74.3 bits (181), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 92/183 (50%), Gaps = 16/183 (8%)

Query: 87  RALAYQTRVDQIVQQLESGSLEAEENQVPEVAA------QNADQKSPNPQVDREKLECLE 140
           RA   Q +++ + ++L +G L    N  PE  +       N++ K  N +  R + + LE
Sbjct: 50  RAYIVQLQIEDLTRKLRTGDLGIPPN--PEDRSPSPEPIYNSEGKRLNTREFRTRKK-LE 106

Query: 141 LEKQEVIGEILKLNPSYRTPPDYKP---LLKEAVVPIPVKEYPGYNFLGLIFGPASDTQK 197
            E+  +I E++ LNP ++ P DYKP    + + V+ IP  EYP  NF+GL+ GP  +T K
Sbjct: 107 EERHTLITEMVALNPDFKPPADYKPPATRVSDKVM-IPQDEYPEINFVGLLIGPRGNTLK 165

Query: 198 RLEKETRTVIKVYGTKADTGEKVEISTSDANVQSTYEE-FHISISADSYEKVDAATDLIE 256
            +EKE    I + G  +    KV     D  +    +E  H  ++A++ E V  A + I 
Sbjct: 166 NIEKECNAKIMIRGKGSVKEGKV--GRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIR 223

Query: 257 LLV 259
            ++
Sbjct: 224 NIL 226


>sp|Q15637|SF01_HUMAN Splicing factor 1 OS=Homo sapiens GN=SF1 PE=1 SV=4
          Length = 639

 Score = 73.2 bits (178), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 93/183 (50%), Gaps = 16/183 (8%)

Query: 87  RALAYQTRVDQIVQQLESGSLEAEENQVPEVAA------QNADQKSPNPQVDREKLECLE 140
           RA   Q +++ + ++L +G L    N  PE  +       N++ K  N +  R + + LE
Sbjct: 50  RAYIVQLQIEDLTRKLRTGDLGIPPN--PEDRSPSPEPIYNSEGKRLNTREFRTRKK-LE 106

Query: 141 LEKQEVIGEILKLNPSYRTPPDYKP---LLKEAVVPIPVKEYPGYNFLGLIFGPASDTQK 197
            E+  +I E++ LNP ++ P DYKP    + + V+ IP  EYP  NF+GL+ GP  +T K
Sbjct: 107 EERHNLITEMVALNPDFKPPADYKPPATRVSDKVM-IPQDEYPEINFVGLLIGPRGNTLK 165

Query: 198 RLEKETRTVIKVYGTKADTGEKVEISTSDANVQSTYEE-FHISISADSYEKVDAATDLIE 256
            +EKE    I + G K    E  ++   D  +    +E  H  ++A++ E V  A + I 
Sbjct: 166 NIEKECNAKIMIRG-KGSVKEG-KVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIR 223

Query: 257 LLV 259
            ++
Sbjct: 224 NIL 226


>sp|P0CO44|BBP_CRYNJ Branchpoint-bridging protein OS=Cryptococcus neoformans var.
           neoformans serotype D (strain JEC21 / ATCC MYA-565)
           GN=BBP PE=3 SV=1
          Length = 546

 Score = 69.3 bits (168), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 115/274 (41%), Gaps = 50/274 (18%)

Query: 56  EKASSNDDGKKVVRKTKWGPDLSLDASVKRG-----------------RALAYQTRVDQI 98
           ++  SN+DG +  R+++WG     DAS K                      A   R+++I
Sbjct: 119 DRGDSNEDGPRK-RRSRWG-----DASAKVNVPGMPVAVMGNVSQTELDNYAIHVRLEEI 172

Query: 99  VQQLESGSLEAEENQVPEVAAQNADQKSPNPQVD--------RE--KLECLELEKQEVIG 148
            ++L +G +   E Q            SP PQ D        RE    + LE E+  +I 
Sbjct: 173 NRKLRTGDVVPPEGQRS---------PSPTPQYDAYGRRTNTRELRYRKKLEDERTRLID 223

Query: 149 EILKLNPSYRTPPDYKPLLK---EAVVPIPVKEYPGYNFLGLIFGPASDTQKRLEKETRT 205
             +K +P++R P D++       +  V IPVKE+P  NF GL+ GP  ++ K++E+E+  
Sbjct: 224 RAVKSDPNFRPPVDFQHKRGSRPQDKVYIPVKEFPEINFFGLLVGPRGNSLKKMERESGA 283

Query: 206 VIKVYGTKADTGEKVEISTSDANV-QSTYEEFHISISADSYEKVDAATDLIELLVTSVSG 264
            I + G     G   E      N  Q   +E H  I+AD   KV     LI  ++ + + 
Sbjct: 284 KISIRG----KGSVKEGKGRAGNFPQDEEDELHCLITADDESKVKTCVALINKVIETAAS 339

Query: 265 SLAAISTSTLVSGENVSALNQSQGDGAQFLVPNT 298
           +    +         +++LN +  D    L  N 
Sbjct: 340 TPEGENDHKRNQLRELASLNGTLRDDENQLCQNC 373


>sp|P0CO45|BBP_CRYNB Branchpoint-bridging protein OS=Cryptococcus neoformans var.
           neoformans serotype D (strain B-3501A) GN=BBP PE=3 SV=1
          Length = 546

 Score = 69.3 bits (168), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 115/274 (41%), Gaps = 50/274 (18%)

Query: 56  EKASSNDDGKKVVRKTKWGPDLSLDASVKRG-----------------RALAYQTRVDQI 98
           ++  SN+DG +  R+++WG     DAS K                      A   R+++I
Sbjct: 119 DRGDSNEDGPRK-RRSRWG-----DASAKVNVPGMPVAVMGNVSQTELDNYAIHVRLEEI 172

Query: 99  VQQLESGSLEAEENQVPEVAAQNADQKSPNPQVD--------RE--KLECLELEKQEVIG 148
            ++L +G +   E Q            SP PQ D        RE    + LE E+  +I 
Sbjct: 173 NRKLRTGDVVPPEGQRS---------PSPTPQYDAYGRRTNTRELRYRKKLEDERTRLID 223

Query: 149 EILKLNPSYRTPPDYKPLLK---EAVVPIPVKEYPGYNFLGLIFGPASDTQKRLEKETRT 205
             +K +P++R P D++       +  V IPVKE+P  NF GL+ GP  ++ K++E+E+  
Sbjct: 224 RAVKSDPNFRPPVDFQHKRGSRPQDKVYIPVKEFPEINFFGLLVGPRGNSLKKMERESGA 283

Query: 206 VIKVYGTKADTGEKVEISTSDANV-QSTYEEFHISISADSYEKVDAATDLIELLVTSVSG 264
            I + G     G   E      N  Q   +E H  I+AD   KV     LI  ++ + + 
Sbjct: 284 KISIRG----KGSVKEGKGRAGNFPQDEEDELHCLITADDESKVKTCVALINKVIETAAS 339

Query: 265 SLAAISTSTLVSGENVSALNQSQGDGAQFLVPNT 298
           +    +         +++LN +  D    L  N 
Sbjct: 340 TPEGENDHKRNQLRELASLNGTLRDDENQLCQNC 373


>sp|Q750X2|BBP_ASHGO Branchpoint-bridging protein OS=Ashbya gossypii (strain ATCC 10895
           / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=BBP PE=3 SV=2
          Length = 507

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 89/178 (50%), Gaps = 12/178 (6%)

Query: 90  AYQT--RVDQIVQQLESGSLEAEENQVPEVA---AQNADQKSPNPQVDREKLECLELEKQ 144
           AYQ   R+ +I  +L +  L    ++   ++     ++  K  N +  R + + LE E+ 
Sbjct: 66  AYQVMYRIQEITIKLRTNDLNPPTSRYRSLSPPPVYDSQGKRTNTREHRYRKK-LEEERH 124

Query: 145 EVIGEILKLNPSYRTPPDYK-PLLKEAVVPIPVKEYPGYNFLGLIFGPASDTQKRLEKET 203
            ++   LK+ P +  P DY+ P   +    IP+ +YP  NF+GL+ GP  +T K+L++++
Sbjct: 125 RLVEIALKMIPHFIAPDDYRRPSKFQDKYYIPINDYPEINFVGLLLGPRGNTLKQLQQQS 184

Query: 204 --RTVIKVYGTKADTGEKVEISTSDANVQSTYEEFHISISADSYEKVDAATDLIELLV 259
             + VI+  G+  +     ++     N+    E  H  ISAD+ EK+    + +E ++
Sbjct: 185 GCKIVIRGRGSVKEGKAATDLPKGAMNMN---EPLHCVISADTEEKIPLGINAVESII 239


>sp|Q5AED9|BBP_CANAL Branchpoint-bridging protein OS=Candida albicans (strain SC5314 /
           ATCC MYA-2876) GN=BBP PE=3 SV=1
          Length = 455

 Score = 52.8 bits (125), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 70/140 (50%), Gaps = 16/140 (11%)

Query: 132 DREKLECLELEKQEVIGEILKLNPSYRTPPDYK-PLLKEAVVPIPVKEYPGYNFLGLIFG 190
           +R   E LE E+ E++        +Y  P +Y+ P      + +PVK+YP  NF+G + G
Sbjct: 111 ERRVTEALEKERHELVELAASSIKNYMIPSNYRRPSRTVERLYVPVKDYPDINFVGFLIG 170

Query: 191 PASDTQKRLEKETRTVIKVYGTKADTGEKVEISTSDA--------NVQSTYEEFHISISA 242
           P  +T K+L++++   +++ G     G   E  +SD         ++Q   ++ H+ I+A
Sbjct: 171 PRGNTLKKLQEDSGARLQIRG----KGSVKEGKSSDGFGSSQTGTDIQ---DDLHVLITA 223

Query: 243 DSYEKVDAATDLIELLVTSV 262
           DS  K+  A  L+  ++  +
Sbjct: 224 DSPLKISKAVKLVNEIIDKL 243


>sp|Q6BSP4|BBP_DEBHA Branchpoint-bridging protein OS=Debaryomyces hansenii (strain ATCC
           36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
           GN=BBP PE=3 SV=2
          Length = 518

 Score = 50.8 bits (120), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 22/146 (15%)

Query: 133 REKLECLELEKQ-----EVIGEILKLNPSYRTPPDY-KPLLKEAVVPIPVKEYPGYNFLG 186
           RE    L LEK+     EV    +K   +Y +P DY KP+     + IPVK+YP  NF+G
Sbjct: 124 REARTKLALEKERHYLVEVAAGSIK---NYMSPIDYRKPVKTYEKIYIPVKDYPDINFVG 180

Query: 187 LIFGPASDTQKRLEKET--RTVIKVYGTKADTGEKVEISTSDA----------NVQST-Y 233
           L+ GP  +T ++L++++  R  I+  G+  D       +  D           N+ S+  
Sbjct: 181 LLLGPRGNTLRQLQEDSGARLAIRGKGSVKDGKSTSSNNDDDDSNSSLSFSNPNLNSSGN 240

Query: 234 EEFHISISADSYEKVDAATDLIELLV 259
           ++ H+ I++DS  K+  A  L   ++
Sbjct: 241 DDLHVVITSDSQSKIAKAIKLTNQVI 266


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.310    0.128    0.378 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 332,953,734
Number of Sequences: 539616
Number of extensions: 17440560
Number of successful extensions: 74454
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 2947
Number of HSP's that attempted gapping in prelim test: 52361
Number of HSP's gapped (non-prelim): 14160
length of query: 781
length of database: 191,569,459
effective HSP length: 126
effective length of query: 655
effective length of database: 123,577,843
effective search space: 80943487165
effective search space used: 80943487165
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 65 (29.6 bits)