BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003990
(781 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O65709|FAO4A_ARATH Long-chain-alcohol oxidase FAO4A OS=Arabidopsis thaliana GN=FAO4A
PE=3 SV=2
Length = 726
Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/750 (60%), Positives = 567/750 (75%), Gaps = 26/750 (3%)
Query: 32 MESLSALCDTFLPAVDVKTAASIDKDIADFFRASASAAGTPERLGGLMSERLKHPKKWLV 91
MESL A+CDTF+ ++D +D +A +F ASAS GTP+R+ LMSERL HPKKW++
Sbjct: 1 MESLVAICDTFISSIDDSGVGHVDDCVAGYFSASASQTGTPDRVARLMSERLHHPKKWIL 60
Query: 92 RLCLWLLSTCIGSLVLCGRYCFSSKFPYMHSFTQLPQKKRDAVLVSWSLSYFYHLRMLYK 151
R LWLLST IGSLVLCG F+ +FPY F +LP+K+R+ +L++WS SYF LRML++
Sbjct: 61 RAGLWLLSTWIGSLVLCGWRSFTGEFPYFRRFCRLPEKRREEILLNWSSSYFSLLRMLFR 120
Query: 152 AMKLLILLVFFTQVNEKNENLSWKAIGYKGPDPEFKTKSMQRKTLRNEGLNDDDDDEGQN 211
+KL+ LVFFTQV+EK NL+WKAIGY GP P+ + D + E
Sbjct: 121 TIKLISALVFFTQVDEKGRNLAWKAIGYNGPSPD----------------HSDHEVELNE 164
Query: 212 DDGHEEEAELYGPLYKGLINMQLPRNIVADSLRQVGFPVSVRNKRNAAPSSIASPSLVIK 271
+ ++ E++GPLY G+++++ PR V L GF VS KRN SSI+ P + I+
Sbjct: 165 EKKKKKPEEIFGPLYNGIVDLKSPREAVEKKLAGRGFAVS-NQKRNTNGSSISDPVMKIQ 223
Query: 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCARSNLSLLEGKTMDQMYLAGGMLAT 331
CDAVVVGSGSGGG+ AGVLAKAGYKVLV+E G+Y ARS LSLLEG+ MD MYL+GG+LAT
Sbjct: 224 CDAVVVGSGSGGGVAAGVLAKAGYKVLVIESGNYYARSKLSLLEGQAMDDMYLSGGLLAT 283
Query: 332 DDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDEYELKLFESDLYKEAMEVVCERM 391
D V++LAGSTVGGGSTINWSASIKTP+HV EW ++ +L++F SDLY+EAM+VVC+RM
Sbjct: 284 SDTNVVILAGSTVGGGSTINWSASIKTPEHVMKEWAEKSKLEMFGSDLYREAMDVVCKRM 343
Query: 392 GVQSEVEEEGFNNAVLRRGCKELGYPVNNIPRNSPPDHYCGWCCLGCKDGSKKGTSETWL 451
GVQ EEGFNN VLR+GC++LG PV NIPRN+P DHYCG+CCLGCK G K+GTSETWL
Sbjct: 344 GVQCGFVEEGFNNEVLRKGCEKLGLPVKNIPRNAPSDHYCGFCCLGCKKGQKQGTSETWL 403
Query: 452 VDLVNSGNSAILPGCEAIEVLHK-KRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACG 510
VDLV S N ILPGC+A EV++ ++ + ATGVAF F ++I VVES+VTIVACG
Sbjct: 404 VDLVESDNGLILPGCQATEVMYDCEQGKKKKATGVAFAF----GEEIYVVESRVTIVACG 459
Query: 511 ALSTPNLLKRSGLKNANIGKNLHLHPVTMAWGYFPKTSSSGEWPEEKKTSYEGGIMTAMS 570
AL TP+LLKRSGLKN+NIG+NL LHPV MAWG+FP+ +WPE+KK SYEGGIMTAMS
Sbjct: 460 ALRTPHLLKRSGLKNSNIGRNLCLHPVVMAWGWFPEED---KWPEKKKKSYEGGIMTAMS 516
Query: 571 TTVGNFGKSGYGA-VIQTPALHPGMFSSLMPWVSGADIKLRMCKFSRTAHIFVLARDQGS 629
+ V S YG VIQTPALHPGMFS ++PW S D K RM KFSRTAHIF L RD+G+
Sbjct: 517 SVVIEETHSSYGEMVIQTPALHPGMFSGIIPWTSSKDFKTRMLKFSRTAHIFALLRDKGT 576
Query: 630 GTVNSPYSISYQMEAMDEENLKKGIEKILRILAAAGAEEIGTHHCKGKIINVKKASSEEF 689
GT++S I Y + DEE+LK G+E++L+ILAAAGAEEIGTHH +G+ +NV+ ASS E
Sbjct: 577 GTIDSKTYIDYNLNDEDEESLKNGLERVLKILAAAGAEEIGTHHSEGRSLNVRTASSLEI 636
Query: 690 ERFVKEESSRPLRDLSTPLSSAHQMGSCRMGIDPKTSVVNQMGETWGVEGLYLADTSVFP 749
ERFV+EESS+PL+DLS + SAHQMGSCRMGI P+ S V GETW VE L++ADTSVFP
Sbjct: 637 ERFVREESSKPLKDLSGQICSAHQMGSCRMGIRPEESAVRPTGETWEVERLFVADTSVFP 696
Query: 750 TALGVNPMVTVQAIAYCTAQSVLDVLRRKK 779
TALGVNPMVTVQ+IAYC +V+DVL++KK
Sbjct: 697 TALGVNPMVTVQSIAYCIGLNVVDVLKKKK 726
>sp|B5WWZ8|FAO1_LOTJA Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus GN=FAO1 PE=1
SV=1
Length = 749
Score = 557 bits (1435), Expect = e-157, Method: Compositional matrix adjust.
Identities = 321/783 (40%), Positives = 465/783 (59%), Gaps = 66/783 (8%)
Query: 17 GEENHCYVNSLSSQEMESLSALCDTFLP-----AVDVKTAASID-KDIADFFRASASAAG 70
G +++ + SS EMESL+++C+ LP A+ +K + +D+ F+ SAS
Sbjct: 12 GRKDNKFRQGFSSSEMESLASICEVILPPLPMDALKIKKHDDVSIEDVEFFWNTSASHYP 71
Query: 71 TPERLGGLMSERLKHPKKWLVRLCLWLLSTCIGSLVLCGRYCFSSKFPYMHSFTQLPQKK 130
P + ++S+R L+R+ LWLL+T +G+ +LCG CFS K+P++++F+ + KK
Sbjct: 72 IPHEVAEILSKRSLIEAVILIRVVLWLLATRLGTFLLCGLLCFSEKWPFINNFSSMSLKK 131
Query: 131 RDAVLVSWSLSYFYH-LRMLYKAMKLLILLVFFTQVNEKNENLSWKAIGYKGPDPEFKTK 189
R+ V+ W + F +R+ + +K+L L +FT V+E +N +WKAIGY+ E
Sbjct: 132 RERVMQWWLKNRFITPIRLAFAYLKVLCLFAYFTWVDENGDNPAWKAIGYEVSADEKLPN 191
Query: 190 SMQRKTLRNEGLNDDDDDEGQNDDGHEEEAELYGPLYKGLINMQLPRNIVADSLRQVGFP 249
S + L ++G + HE + L SL + G
Sbjct: 192 SSNGRLL----------EKGIVETMHETNSTL------------------QQSLTEKGLN 223
Query: 250 VSVRNKRNAAPSSIASPSLVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCARS 309
V++ ++ N L +KCDA+VVGSG GGG+ A VL+ AG+KV+VLEKG+Y A
Sbjct: 224 VTLDSRNNI---------LKVKCDAIVVGSGCGGGVAASVLSGAGHKVVVLEKGNYFAPR 274
Query: 310 NLSLLEGKTMDQMYLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDE 369
+ S LEG +MDQ+Y GG+LA+ D ++LLAGSTVGGGS +NWSA IKTP V EW +
Sbjct: 275 DYSSLEGPSMDQLYETGGILASVDSRILLLAGSTVGGGSAVNWSACIKTPHEVLKEWSEN 334
Query: 370 YELKLFESDLYKEAMEVVCERMGVQSEVEEEGFNNAVLRRGCKELGYPVNNIPRNSPPDH 429
+ L LF + Y AME VCER+GV EGF N VLR+GC+ LG V+ +PRNS +H
Sbjct: 335 HNLSLFSTSEYLSAMETVCERIGVTESCTHEGFQNQVLRKGCQNLGLKVDYVPRNSSGNH 394
Query: 430 YCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRD----RNVATGV 485
+CG C GC G K+GT +TWLVD V +G + I+ GC+A L + R+ + GV
Sbjct: 395 FCGSCGYGCPKGEKQGTQDTWLVDAVENG-AVIITGCKAERFLLENNRNGSGRKKKCLGV 453
Query: 486 AFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNANIGKNLHLHPVTMAWGYFP 545
+ +E+KVTI A GAL TP L+ SGLKN NIGKNLHLHPV M WGYFP
Sbjct: 454 LAKALSSRVTMKLQIEAKVTISAGGALLTPPLMISSGLKNKNIGKNLHLHPVLMTWGYFP 513
Query: 546 KTSSSGEWPEEKKTSYEGGIMTAMSTTVGNFGKSGYG---AVIQTPALHPGMFSSLMPWV 602
+++S E K +EGGI+T++ V + + Y A+I+TP+L PG F+SL PW
Sbjct: 514 ESTS-----ELKGKIFEGGIITSVH-KVPSRDSNSYSDTRAIIETPSLGPGSFASLCPWE 567
Query: 603 SGADIKLRMCKFSRTAHIFVLARDQGSGTVNSPYSISYQMEAMDEENLKKGIEKILRILA 662
SG D K RM + RTAH+ + RD+ G V + +SY++ A D+EN+K G+++ LRIL
Sbjct: 568 SGLDFKERMLNYPRTAHLITIIRDKACGQVTTEGRVSYKLSAFDKENMKCGLQQALRILK 627
Query: 663 AAGAEEIGTHHCKGKIINVKKASSEEFERFVKEESSRPLRDLSTP------LSSAHQMGS 716
AAGA E+GTH G+ + + S E F+ +S P+ +P +SAHQMGS
Sbjct: 628 AAGAVEVGTHRSDGQRVKCGEVSENEMAEFI--DSVCPMEGALSPGENWNIYTSAHQMGS 685
Query: 717 CRMGIDPKTSVVNQMGETWGVEGLYLADTSVFPTALGVNPMVTVQAIAYCTAQSVLDVLR 776
CRMG++ K V++ GE+W +GL++ D S+ PTA+GVNPM+T+Q+ AYC + V+D L+
Sbjct: 686 CRMGMNEKEGAVDENGESWEAQGLFVCDASLLPTAVGVNPMITIQSTAYCISNRVVDYLK 745
Query: 777 RKK 779
R +
Sbjct: 746 RDQ 748
>sp|B5WWZ9|FAO2_LOTJA Long-chain-alcohol oxidase FAO2 OS=Lotus japonicus GN=FAO2 PE=2
SV=1
Length = 750
Score = 521 bits (1343), Expect = e-147, Method: Compositional matrix adjust.
Identities = 312/778 (40%), Positives = 457/778 (58%), Gaps = 73/778 (9%)
Query: 23 YVNSLSSQEMESLSALCDTFLPAVDVKTA---ASIDKDIADFFRASASAAGTPERLGGLM 79
Y + LSS +M ++A+C+ P+ + + +S+DK ++ F+ AS S A P+ L+
Sbjct: 23 YSHGLSSSQMHVIAAICEALFPSQPLDSQNNQSSVDKALSAFYTASGSQAPLPDEAAELL 82
Query: 80 SE-RLKHPKKW-LVRLCLWLLSTCIGSLVLCGRYCFSSKFPYMHSFTQLPQKKRDAVLVS 137
+ P+ LV L +LS +G+L+LCG C ++P++H F+++P +KR+ +L
Sbjct: 83 FKFNRSFPEALSLVSWVLLILSFRLGTLLLCGTLCLDWRWPFIHKFSEIPLEKREEILKR 142
Query: 138 WSLSY-FYHLRMLYKAMKLLILLVFFTQVNEKNENLSWKAIGYKGPDPEFKTKSMQRKTL 196
WS + LR+++ KL+ F++ + N WKAIGY+ + + K Q+K
Sbjct: 143 WSREKCWIPLRLVFVLTKLVCFYNLFSRADVNGHNPIWKAIGYQ---VDTREKLTQKKR- 198
Query: 197 RNEGLNDDDDDEGQNDDGHEEEAELYGPLYKGLI-NMQLPRNIVADSLRQVGFPVSVRNK 255
PL +GLI M + + SL + G V+ +
Sbjct: 199 ---------------------------PLQEGLIETMYETDSTLIQSLTEKGLEVTEDLE 231
Query: 256 RNAAPSSIASPSLVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCARSNLSLLE 315
+N IKCDAV+VGSG GGG+ A VLA +G+KV++LEKG Y + S LE
Sbjct: 232 QNMYK---------IKCDAVIVGSGCGGGVAAAVLANSGHKVIILEKGEYFVSHDYSSLE 282
Query: 316 GKTMDQMYLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDEYELKLF 375
G +M+++Y +GG+L + D +++LAGST+GG S INWSA I+TP V EW +++++ LF
Sbjct: 283 GPSMNELYESGGILPSLDGKMMILAGSTLGGXSAINWSACIRTPDSVLREWSEKHKIPLF 342
Query: 376 ESDLYKEAMEVVCERMGVQSEVEEEGFNNAVLRRGCKELGYPVNNIPRNSPPDHYCGWCC 435
S Y+ AM+ VC R+GV +E F N +LR+GC ++G+ V + NS DHYCG CC
Sbjct: 343 ASPDYQSAMDTVCRRIGVTENCNKESFQNQILRQGCAKIGFKVEPVAINSSADHYCGSCC 402
Query: 436 LGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRD------RNVATGVAFEF 489
GC+ G KKGT TWLVD V +G + IL GC+A E L+ +D R +GV
Sbjct: 403 YGCRTGDKKGTESTWLVDAVGNG-AVILTGCKA-EKLNFTLKDGDNGTKRKTCSGVIASA 460
Query: 490 QYMG-AKDICVVESKVTIVACGALSTPNLLKRSGLKNANIGKNLHLHPVTMAWGYFPK-- 546
+ +ESKVTI ACG+LSTP L+ SGLKN NIGKNLHLHP AWGYFP+
Sbjct: 461 TWRSKVTKKLQIESKVTISACGSLSTPPLMISSGLKNPNIGKNLHLHPCQFAWGYFPEDM 520
Query: 547 TSSSGEWPEEKKTSYEGGIMTAMSTTVGNFGKSGYGAVIQTPALHPGMFSSLMPWVSGAD 606
T+ SG +YEGGI+T++ S +I+ PAL PG FS+L+PWVSG D
Sbjct: 521 TNFSG-------NNYEGGIITSIHKVFEEDSTSTPRIIIEAPALGPGSFSALVPWVSGLD 573
Query: 607 IKLRMCKFSRTAHIFVLARDQGSGTVNSPYSISYQMEAMDEENLKKGIEKILRILAAAGA 666
+K RM K++RTA++F L RD GSG V + ISY+++ +D E+L+ G+ K LRIL AAGA
Sbjct: 574 VKERMVKYARTANLFALVRDHGSGEVKAEGRISYKLDKIDRESLQTGLRKALRILVAAGA 633
Query: 667 EEIGTHHCKGKIIN---VKKASSEEF---ERFVKEESSRPLRDLSTPLSSAHQMGSCRMG 720
E+GT+ G+ I +K++ EEF R V SSR ++ T +SAHQM SCRM
Sbjct: 634 VEVGTYRSDGQRIKCRGIKESDLEEFLDSVRVVGGPSSR--NEVWTVFTSAHQMTSCRMS 691
Query: 721 IDPKTSVVNQMGETWGVEGLYLADTSVFPTALGVNPMVTVQAIAYCTAQSVLDVLRRK 778
+ V++ GE+W +GLY+ D SV P+A+GVNPM+T+Q+ AYC A ++ + L+++
Sbjct: 692 ATEEEGAVDENGESWEAKGLYVCDGSVLPSAVGVNPMITIQSTAYCIASNIAESLKKQ 749
>sp|Q9LW56|FAO3_ARATH Long-chain-alcohol oxidase FAO3 OS=Arabidopsis thaliana GN=FAO3
PE=1 SV=1
Length = 746
Score = 498 bits (1281), Expect = e-140, Method: Compositional matrix adjust.
Identities = 306/767 (39%), Positives = 434/767 (56%), Gaps = 67/767 (8%)
Query: 27 LSSQEMESLSALCDTFLPAVDVKTAA-SIDKD-------IADFFRASASAAGTPERLGGL 78
++ EMESL++ C+ LP+V S + D + F+ S S + L
Sbjct: 15 ITVAEMESLASFCEAVLPSVQPPPEELSGEGDNHRNKEALRSFYSTSGSKTPVLRQSIEL 74
Query: 79 MSERLKHPKKWLVRLCLWLLSTCIGSLVLCGRYCFSSKFPYMHSFTQLPQKKRDAVLV-- 136
+++R RL L+LL+T +G+L++CG C S++P++ F++L +KR+ VL
Sbjct: 75 VTKRGTIEAYIATRLILFLLATRLGTLLICGTECLVSRWPFVEKFSELSLEKRERVLQKQ 134
Query: 137 --SWSLSYFYHLRMLYKAMKLLILLVFFTQVNEKNENLSWKAIGYKGPDPEFKTKSMQRK 194
+W L+ +R + +K+ L FF++VN EN +W+AIGY+
Sbjct: 135 FKNWILT---PIRAAFVYIKVAFLFCFFSRVNPNGENPAWEAIGYR-------------- 177
Query: 195 TLRNEGLNDDDDDEGQNDDGHEEEAELYGPLYKGLI-NMQLPRNIVADSLRQVGFPVSVR 253
+ DE + + H E PL KG++ M+ + +SL G +
Sbjct: 178 ---------VNPDENKPSETHNER-----PLEKGIVETMEETEQTLLESLAHKGLEAVLD 223
Query: 254 NKRNAAPSSIASPSLVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCARSNLSL 313
+ +A + IKCD VVVGSGSGGG+ A VLAK+G KV+VLEKGSY S
Sbjct: 224 TEHDA---------IRIKCDVVVVGSGSGGGVAASVLAKSGLKVVVLEKGSYFTPSEHRP 274
Query: 314 LEGKTMDQMYLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDEYELK 373
EG +D++Y GG+L + D ++LAG+TVGGGS +NWSA IKTPK V EW ++ +
Sbjct: 275 FEGPGLDKLYENGGILPSVDGSFMVLAGATVGGGSAVNWSACIKTPKSVLQEWSEDQNIP 334
Query: 374 LFESDLYKEAMEVVCERMGVQSEVEEEGFNNAVLRRGCKELGYPVNNIPRNSPPDHYCGW 433
LF + Y AMEVV +RMGV + E E F N +LR+GC+ LG+ V N+PRNS HYCG
Sbjct: 335 LFGTKEYLTAMEVVWKRMGVTEKCELESFQNQILRKGCENLGFNVENVPRNSSESHYCGS 394
Query: 434 CCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVAT-----GVAFE 488
C GC+ G KKG+ TWLVD V G + IL GC+A + +K GV +
Sbjct: 395 CGYGCRQGDKKGSDRTWLVDAVGHG-AVILTGCKAERFILEKNGSNKGGKQMKCLGVMAK 453
Query: 489 FQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNANIGKNLHLHPVTMAWGYFPKTS 548
+ +E+KVT+ A GAL TP L+ SGL+N NIGKNLHLHPV MAWGYFP
Sbjct: 454 SLNGNIAKMLKIEAKVTVSAGGALLTPPLMISSGLRNRNIGKNLHLHPVLMAWGYFPDKE 513
Query: 549 SSGEWPEEKKTSYEGGIMTAMSTTVGNFGKSGYGAVIQTPALHPGMFSSLMPWVSGADIK 608
SS K SYEGGI+T++S + S A+I+TP L PG FS L PW SG D+K
Sbjct: 514 SSN--ISFKGNSYEGGIITSVSKVLSE--DSEVRAIIETPQLGPGSFSVLTPWTSGLDMK 569
Query: 609 LRMCKFSRTAHIFVLARDQGSGTVNSPYSISYQMEAMDEENLKKGIEKILRILAAAGAEE 668
RM ++SRTA + + RD+GSG V + I+Y ++ D +NLK G+ + LRIL AAGAEE
Sbjct: 570 KRMARYSRTASLITIVRDRGSGEVKTEGRINYTVDKTDRDNLKAGLRESLRILIAAGAEE 629
Query: 669 IGTHHCKGKIINVKKASSEEFERFVK----EESSRPLRDLSTPLSSAHQMGSCRMGIDPK 724
+GTH G+ + K + + F+ EE ++ + + SSAHQMGSCR+G + K
Sbjct: 630 VGTHRSDGQRLICKGVNENSIQEFLDSVSTEEGAKGMTEKWNVYSSAHQMGSCRIGENEK 689
Query: 725 TSVVNQMGETWGVEGLYLADTSVFPTALGVNPMVTVQAIAYCTAQSV 771
++ GE+W E L++ D S P+A+GVNPM+TV + AYC + +
Sbjct: 690 EGAIDLNGESWEAEKLFVCDASALPSAVGVNPMITVMSTAYCISTRI 736
>sp|Q94BP3|FAO4B_ARATH Long-chain-alcohol oxidase FAO4B OS=Arabidopsis thaliana GN=FAO4B
PE=2 SV=2
Length = 748
Score = 488 bits (1257), Expect = e-137, Method: Compositional matrix adjust.
Identities = 296/770 (38%), Positives = 433/770 (56%), Gaps = 61/770 (7%)
Query: 23 YVNSLSSQEMESLSALCDTFLPAVDVKTAASIDKDIADFFRASASAAGTPERLGGLMSER 82
Y + S +++SL+ +C TFLP S + + F AS++ + + ++ +
Sbjct: 23 YNHGFSPSQIQSLAVICQTFLPP----ETTSEQQAVNSFHVASSTQPPFTDEVAEMIVKN 78
Query: 83 LKHPKKWLVRLCLWLLSTCIGSLVLCGRYCFSSKFPYMHSFTQLPQKKRDAVLVSWSLS- 141
+ ++R+ L +LS G+L+LCG C +P++ F+QLP KR+A+L +WS
Sbjct: 79 GRSEAVKVLRIILMILSFRFGTLLLCGSLCLDKSWPFVLKFSQLPLDKREAILRNWSRQS 138
Query: 142 -YFYHLRMLYKAMKLLILLVFFTQVNEKNENLSWKAIGYKGPDPEFKTKSMQRKTLRNEG 200
+ R+ + K L FF+Q +E +N + +AIGY E +S +K+
Sbjct: 139 GFLLPFRITFFLAKFYTLFYFFSQTDENLKNPALEAIGYCIDGTE---RSSNKKS----- 190
Query: 201 LNDDDDDEGQNDDGHEEEAELYGPLYKGLINMQLPRNI-VADSLRQVGFPVSVRNKRNAA 259
E E PL KG+I ++ + SL + G V+ + N
Sbjct: 191 ----------------EADEKRRPLEKGIIETMHESDVTITQSLTEKGVHVARDDGDNV- 233
Query: 260 PSSIASPSLVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCARSNLSLLEGKTM 319
I+CDAVVVGSGSGGG+ A LAKAG KVLVLEKG+Y + S LE +M
Sbjct: 234 --------YRIRCDAVVVGSGSGGGVAAANLAKAGLKVLVLEKGNYFTAHDYSGLEVPSM 285
Query: 320 DQMYLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDEYELKLFESDL 379
++Y GG+L T D +LLAGS VGGG+ +NWSASI+TP HV EW + ++K F S
Sbjct: 286 LELYEKGGLLTTVDGKFMLLAGSAVGGGTAVNWSASIRTPDHVLQEWSEGSKIKFFGSQE 345
Query: 380 YKEAMEVVCERMGVQSEVEEEGFNNAVLRRGCKELGYPVNNIPRNSPPDHYCGWCCLGCK 439
Y+ AM+ V R+GV + GF N VLR+GC+ LG V ++PRNSP DHYCG C GC+
Sbjct: 346 YQSAMDEVTIRIGVTERCVKHGFQNQVLRKGCERLGLQVESVPRNSPEDHYCGLCGYGCR 405
Query: 440 DGSKKGTSETWLVDLVNSGNSAILPGCEAIEVL-------HKKRRDRNVATGVAFEFQYM 492
G+K GT +TWLVD V +G + IL G +A + +R+ R V + +
Sbjct: 406 AGAKNGTDQTWLVDAVENG-AVILTGIKAERFVLVDNTSSSNERKKRCVGVFASSVGGKI 464
Query: 493 GAKDICVVESKVTIVACGALSTPNLLKRSGLKNANIGKNLHLHPVTMAWGYFPKTSSSGE 552
G K I +E++VT+ + G+L TP L+ SGLKN NIG+NL LHPV M WGYFP+ S
Sbjct: 465 GKKFI--IEARVTVSSAGSLLTPPLMLSSGLKNPNIGRNLKLHPVLMTWGYFPEKDS--- 519
Query: 553 WPEEKKTSYEGGIMTAMSTTVGNFGKSGYGAVIQTPALHPGMFSSLMPWVSGADIKLRMC 612
E YEGGI+T++ N +SG A+++ P + P ++ L PWVSG D+K RM
Sbjct: 520 --EFSGKMYEGGIITSVHHM--NDTESGCKAILENPLIGPASYAGLSPWVSGPDLKERMI 575
Query: 613 KFSRTAHIFVLARDQGSGTVNSPYSISYQMEAMDEENLKKGIEKILRILAAAGAEEIGTH 672
K+ RTAH+F L RD GSG V ++Y+ D ENL+ G+ + LR+ AAGA E+GT+
Sbjct: 576 KYGRTAHLFALVRDLGSGEVMMENEVTYRTTKKDRENLRAGLRQALRVSVAAGAVEVGTY 635
Query: 673 HCKGKIINVKKASSEEFERFVKEESS----RPLRDLSTPLSSAHQMGSCRMGIDPKTSVV 728
G+ + + + E E F+ E + + T SAHQMGSCRMG+ + +
Sbjct: 636 RSDGQKMKCEAITKEAMEEFLDEVDAVGGVGTKGEYWTTYFSAHQMGSCRMGVTAEEGAL 695
Query: 729 NQMGETWGVEGLYLADTSVFPTALGVNPMVTVQAIAYCTAQSVLDVLRRK 778
++ GE+W EGL++ D S+ P+A+GVNPM+T+Q+ AYC + ++D L+ K
Sbjct: 696 DENGESWEAEGLFVCDGSILPSAVGVNPMITIQSTAYCISSKIVDSLQNK 745
>sp|Q9ZWB9|FAO1_ARATH Long-chain-alcohol oxidase FAO1 OS=Arabidopsis thaliana GN=FAO1
PE=3 SV=2
Length = 758
Score = 481 bits (1237), Expect = e-134, Method: Compositional matrix adjust.
Identities = 285/792 (35%), Positives = 451/792 (56%), Gaps = 70/792 (8%)
Query: 13 LQLWGEENHCYVNSLSSQEMESLSALCDTFLPAVDVKT--------AASIDKDIADFFRA 64
L W + + + S ++++LS++CD +P V +++ D ++ F +
Sbjct: 14 LLRWSVKQESFSHGFSKSDLQALSSICDAIMPPVPLESLNLEMKLKVLRNDALLSFFKSS 73
Query: 65 SASAAGTPERLGGLMSERLKHPKKWLVRLCLWLLSTCIGSLVLCGRYCFSSK-FPYMHSF 123
S+ + P+ + L++ + +VR+ L +L+ +G+L+LCG C K +P++ F
Sbjct: 74 SSESHVRPDEVAELLATKAIPLTVLVVRIVLRILTFRLGTLLLCGLVCLDKKHWPFLLKF 133
Query: 124 TQLPQKKRDAVLVSWSLSYFYHL-RMLYKAMKLLILLVFFTQVNEKNENLSWKAIGYKGP 182
+++ +KR+ VL W+ ++ L R+ + +K + L +FT NE +EN W AI Y
Sbjct: 134 SEMSLEKREKVLQRWNTQWYNPLARIGFMMIKAIFLFYYFTWTNENSENPVWDAINY--- 190
Query: 183 DPEFKTKSMQRKTLRNEGLNDDDDDEGQNDDGHEEEAELYGPLYKGLINMQLPRNI-VAD 241
+ G+N+D ++E PL +G+I + +
Sbjct: 191 ----------------------SVEIGENEDMEQKER----PLDEGIIETAKEDEMTIKQ 224
Query: 242 SLRQVGFPVSVRNKRNAAPSSIASPSLVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLE 301
+ G V+ +R+ + I+CDAVVVGSG GGG+ A +LAK+G +V+V+E
Sbjct: 225 RMINKGLKVTEDRERD---------TYKIECDAVVVGSGCGGGVAAAILAKSGLRVVVIE 275
Query: 302 KGSYCARSNLSLLEGKTMDQMYLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKH 361
KG+Y A + S LEG +M +++ + ++ T D +AGSTVGGGS +NW+AS+KTP
Sbjct: 276 KGNYFAPRDYSALEGPSMFELFESNSLMMTHDGRFRFMAGSTVGGGSVVNWAASLKTPDA 335
Query: 362 VANEWCDEYELKLFESDLYKEAMEVVCERMGVQSEVEEEGFNNAVLRRGCKELGYPVNNI 421
+ EW + ++ S+ YK AM +VC+R+GV ++ EGF N +LR+GC++LG V +
Sbjct: 336 IIEEWSVHRGISIYSSEKYKAAMGIVCKRLGVTEKIIREGFQNQILRKGCEKLGLDVTIV 395
Query: 422 PRNSPPDHYCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVL-----HKKR 476
PRNS HYCG C GC G K+GT TWLVD VN+ N+ IL C+A +++ KR
Sbjct: 396 PRNSTEKHYCGSCSYGCPTGEKRGTDSTWLVDAVNN-NAVILTQCKAEKLILADNDANKR 454
Query: 477 RD---RNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNANIGKNLH 533
+ R GVA + K + + +KVTIVACG+L TP LL SGLKN+NI + LH
Sbjct: 455 EESGRRKRCLGVAASLSHQTRKKL-QINAKVTIVACGSLKTPGLLASSGLKNSNISRGLH 513
Query: 534 LHPVTMAWGYFPKTSSSGEWPEEKKTSYEGGIMTAMSTTVGNFGKSGYGAVIQTPALHPG 593
+HP+ MAWGYFP+ +S E + ++EG I+T++ V + ++TPA+ PG
Sbjct: 514 IHPIMMAWGYFPEKNS-----ELEGAAHEGEIVTSLH-YVHPMDSTTPNITLETPAIGPG 567
Query: 594 MFSSLMPWVSGADIKLRMCKFSRTAHIFVLARDQGSGTVNSPYSISYQMEAMDEENLKKG 653
F++L PWVSG+D+K RM K++RTAHIF + RD+G G V + Y++ DEENL G
Sbjct: 568 TFAALTPWVSGSDMKERMAKYARTAHIFAMVRDEGVGEVKGDI-VKYRLTKADEENLTIG 626
Query: 654 IEKILRILAAAGAEEIGTHHCKGKIINVKKASSEEFERFVKEESSRP----LRDLSTPLS 709
+++ LRIL AAGA E+GT+ G+ + ++ E F+ ++ P + T
Sbjct: 627 LKQALRILVAAGAAEVGTYRSDGQRMKCDGIKQKDLEAFLDTVNAPPGVVSMSKHWTQSF 686
Query: 710 SAHQMGSCRMGIDPKTSVVNQMGETWGVEGLYLADTSVFPTALGVNPMVTVQAIAYCTAQ 769
+AHQ+G CRMG K ++ GE+W E LY+ D SV PTALGVNPM+TVQ+ AYC +
Sbjct: 687 TAHQIGCCRMGATEKEGAIDGKGESWEAEDLYVCDASVLPTALGVNPMITVQSTAYCISN 746
Query: 770 SVLDVLRRKKSN 781
+ ++++++K +
Sbjct: 747 RIAELMKKRKKD 758
>sp|Q11157|Y492_MYCTU Uncharacterized GMC-type oxidoreductase Rv0492c/MT0511/MT0512
OS=Mycobacterium tuberculosis GN=Rv0492c PE=3 SV=2
Length = 629
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 155/522 (29%), Positives = 239/522 (45%), Gaps = 41/522 (7%)
Query: 262 SIASPSLVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS-YCARSNLSLLEGKTMD 320
S SPS V + DAVVVGSG+GG ++A LA+AG V+VLE+G + S
Sbjct: 138 SADSPS-VTRADAVVVGSGAGGAMVARTLARAGLDVVVLEEGRRWTVEEFRSTHPVDRYA 196
Query: 321 QMYL-AGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDEYELKLFESDL 379
+Y AG +A V+L G VGG + +N + V W DE+ L L + D
Sbjct: 197 GLYRGAGATVALGRPAVVLPMGRAVGGTTVVNSGTCFRPSLAVQRRWRDEFGLGLADPDQ 256
Query: 380 YKEAMEVVCERMGVQS-EVEEEGFNNAVLRRGCKELGYPVNNIPRNSPPDHYCGWCCLGC 438
++ + + V +E G N +L + K LG+ IPRN+P C C +GC
Sbjct: 257 LGRRLDDAEQTLRVAPVPLEIMGRNGRLLLQAAKSLGWRAAPIPRNAPGCRGCCQCAIGC 316
Query: 439 KDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDIC 498
+K G L +G + I+ +LH+ R A GV
Sbjct: 317 PSNAKFGVHLNALPQACAAG-ARIISWARVERILHRAGR----AYGVRARRPD---GTTL 368
Query: 499 VVESKVTIVACGALSTPNLLKRSGLK-NANIGKNLHLHPVTMAWGYFPKTSSSGEWPEEK 557
V + +VA GA TP LL+RSGL + +G NL LHP TM G F ++
Sbjct: 369 DVLADAVVVAAGATETPGLLRRSGLGGHPRLGHNLALHPATMLAGLF----------DDD 418
Query: 558 KTSYEGGIMTAMSTTVGNFGKSGYGAVIQTPALHPGMFSSLMPWVSGADIKLRMCKFSRT 617
++ G + +A V F +S G +I+ + PGM S + P GA++ + + +
Sbjct: 419 VFAWRGVLQSA---AVHEFHESD-GVLIEATSTPPGMGSMVFPGY-GAELLRWLDRAPQI 473
Query: 618 AHIFVLARDQGSGTVNSPYS---ISYQMEAMDEENLKKGIEKILRILAAAGAEEIGTHHC 674
A + D+G GTV S + Y + + L+ ++ I R+L AAGA E+ T
Sbjct: 474 ATFGAMVADRGVGTVRSVRGETVVRYDIAPGEIAKLRVALQAIGRLLFAAGAVEVLTGIP 533
Query: 675 KGKIINVKKASSEEFERFVKEESSRPLRDLSTPLSSAHQMGSCRMGIDPKTSVVNQMGET 734
+ S E + ++ + R L L++ H G+ G D + V+ G
Sbjct: 534 GAPPMR----SLPELQDVLRRANPRSLH-----LAAFHPTGTAAAGADEQLCPVDATGRL 584
Query: 735 WGVEGLYLADTSVFPTALGVNPMVTVQAIAYCTA-QSVLDVL 775
GVEG+++AD S+ P+ VNP +++ A+A A Q+V V+
Sbjct: 585 RGVEGVWVADASILPSCPEVNPQLSIMAMALAVADQTVAKVV 626
>sp|P55582|Y4NJ_RHISN Uncharacterized GMC-type oxidoreductase y4nJ OS=Rhizobium sp.
(strain NGR234) GN=NGR_a02320 PE=3 SV=1
Length = 505
Score = 140 bits (353), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 135/526 (25%), Positives = 230/526 (43%), Gaps = 48/526 (9%)
Query: 268 LVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCARSNLSLLEGKTMDQMYLAGG 327
L ++ DAV++GSG+GG +A VL AG V++LE+G + S+ S + + GG
Sbjct: 11 LQLEADAVIIGSGAGGASVADVLTAAGLYVIMLEEGGHVPSSSASPFASEAFAAAWRGGG 70
Query: 328 MLATDDMGVILLA-GSTVGGGSTINWSASIKTPKHVANEWCDEYELKLFESDLYKEAMEV 386
+ A I A G VGGG+ IN + + + + ++W Y+++ F D +
Sbjct: 71 LTAAIGRPPIAYAEGRCVGGGTEINSAIAQRADSDLLDQWRKLYKIENFTPDELSQYYGR 130
Query: 387 VCERMGVQSEVEEEGFNNAVLRRGCKELGYPVNNIPRNSPPDHYCGWCCLGCKDGSKKGT 446
+ G +LR G + LG+ V+ + R C C +G+K+
Sbjct: 131 AETTVNASLTPGPLGRPTDILRLGGEALGWKVSELKRGQRDCKGANRCSFICPNGAKQSM 190
Query: 447 SETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICV-VESKVT 505
+ T L ++ G + A + K R ++ A V + Q G + + V V++ +
Sbjct: 191 AVTLLPKSMDRGMRLL-----ARTRVDKIRIEKGRAAVVVAQLQDAGGQGVHVRVKAGLV 245
Query: 506 IVACGALSTPNLLKRSGLKNANIGKNLHLHPVTMAWGYF--PKTSSSGEWPEEKKTSYEG 563
V GA+ TP LL+RSGL+ IG L +HP A F P + P T +
Sbjct: 246 FVCAGAIHTPALLRRSGLRK-RIGDTLRIHPTIRATALFDEPVDAHQSRLPLTAVTEF-- 302
Query: 564 GIMTAMSTTVGNFGKSGYGAVIQTPALHPGMFSSLMPWVSGADI--KLRMCKFSRTAHIF 621
+ G + TPA+ S W + D+ R+C +
Sbjct: 303 ------------MPEQRIGGSVFTPAVF--GLSLAEDWTNRGDLMQAWRLC-----GSYY 343
Query: 622 VLARDQGSGTV------NSPYSISYQMEAMDEENLKKGIEKILRILAAAGAEEIGTHHCK 675
+ R +G G+V N P +S+++ D +L + + + + + AAGA ++
Sbjct: 344 GMIRPRGVGSVRPLPGINEPL-VSFKLAPEDWISLGQVLTLLGQAMFAAGARKV------ 396
Query: 676 GKIINVKKASSEEFERFVKEESSRPLRDLSTPLSSAHQMGSCRMGIDPKTSVVNQMGETW 735
I ++ V E ++PL + +T L + H +C G V+ G
Sbjct: 397 --IPSISGHEGWTNPDEVDEFRNKPLPEKATNLMTIHLFSTCPPGEHRDACAVDSYGRVR 454
Query: 736 GVEGLYLADTSVFPTALGVNPMVTVQAIAYCTAQSVLDVLRRKKSN 781
GVE L++AD SV P A GVNP +T+ A+A+ A++ L R+++
Sbjct: 455 GVENLFVADGSVIPEAPGVNPQMTIMALAFRIAEAALSHSSRERAQ 500
>sp|Q2MF66|LIVQ_STRLV 6'''-hydroxyparomomycin C oxidase OS=Streptomyces lividus GN=livQ
PE=1 SV=1
Length = 546
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 121/535 (22%), Positives = 202/535 (37%), Gaps = 75/535 (14%)
Query: 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCARSNLSLLEGKTMDQMYLA------- 325
D V+GSG+ G + A L + G VL++E+G A ++ L E +++ + LA
Sbjct: 39 DVCVIGSGASGAVAADRLVRQGLDVLMVEEGFRLA-PHVGLDEAESLSRQALARDGEGNW 97
Query: 326 ---GGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDEYELKLFESDLYKE 382
G T ++G G+ GG++ + P + + + +DL
Sbjct: 98 TDEGWPWTTSNLG----GGTVYYGGASFRYRPFDFDPGELVHTDGVDVRWPYTLADLVPY 153
Query: 383 AMEVVCERMGV---------------QSEVEEEGFNNAVLRRGCKELGYPVNNIPRNSPP 427
EV+ R+GV + + VLR + LGY P
Sbjct: 154 -YEVLERRLGVCGGDAPGIHRGSRHSRGPAHQPSPAARVLRAAGESLGYRPFPTPLAINR 212
Query: 428 DHYCGWC-------CLG--CKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRD 478
D + G C+ C G+K +L L N A+ G A+ + ++ R
Sbjct: 213 DPHGGRAACARDSLCVSHLCPTGAKGDVVAVFLAPLAAHPNFALRTGVRALRL--EQDRS 270
Query: 479 RNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNANIGKNLHLHPVT 538
VA + Q A V ++V +VAC A+ + LL RS + G H H V
Sbjct: 271 GEVAAVRCLDRQTGQAHR---VRARVYVVACNAIQSAALLLRSRTPYSPDGVGNHSHLV- 326
Query: 539 MAWGYFPKTSSSGEWPEEKKTSYEGGIMTAMSTTVGNFGKSGYGAVIQTPALHPGMFSSL 598
G K + Y G + A AV+ P + G FS++
Sbjct: 327 ------------GRGLCMKLSEYLSGTVDADP------------AVLADPYTNTGPFSTV 362
Query: 599 MPWVSGADIKLRMCKFSRTAHIFVLARDQGSGTVNSPYSISYQMEAMDEENLKKGIEKIL 658
D C I+ RDQ V+ + + D NL +
Sbjct: 363 AFLDHYLDPD---CPGGFGGLIYESKRDQRHKLVHDALELRIETILADHPNLDNRVGLST 419
Query: 659 RILAAAGAEEIGTHHCKGKIINVKKASSEEFERFVKEESSRPLRDLSTPLS--SAHQMGS 716
+ + + + ++ + + ER ++ +R +R ST + S+H G+
Sbjct: 420 HLDEDGMPAVVIDYTPDPRDLDRLRYMTGRCERLLRTAGARGIRSRSTGFAQGSSHLHGT 479
Query: 717 CRMGIDPKTSVVNQMGETWGVEGLYLADTSVFPTALGVNPMVTVQAIAYCTAQSV 771
CR G DP SVV+ G + +Y+ D S P G+NP +T+QA A T++++
Sbjct: 480 CRAGHDPARSVVDAWGRVHSADNVYIVDGSFMPYPGGLNPTLTIQAHALRTSRAI 534
>sp|B5ZUG2|BETA_RHILW Choline dehydrogenase OS=Rhizobium leguminosarum bv. trifolii
(strain WSM2304) GN=betA PE=3 SV=1
Length = 549
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 118/538 (21%), Positives = 198/538 (36%), Gaps = 93/538 (17%)
Query: 270 IKCDAVVVGSGSGGGLIAGVLAKAGYK-VLVLEKGSYCARSNLSL-------LEGKTMDQ 321
++ D V++GSGS G +A L++ G VLV+E G + + + K +
Sbjct: 1 MQADFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNW 60
Query: 322 MYLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCD------EYE--LK 373
YL+ ++ + G +GG S+IN ++ N W + Y L
Sbjct: 61 GYLSEPEPNLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGAGGWAYADVLP 120
Query: 374 LFESDLYKEAMEVVCERMGVQSEVEEEGFNNAVLR---RGCKELGYPVNNIPRNSPPDHY 430
F+ + E V+ GF N + R K+ G+ S + +
Sbjct: 121 YFKRMEHSHGGEEGWRGTDGPLHVQRGGFTNPLFRAFVEAGKQAGFETTEDYNGSKQEGF 180
Query: 431 CGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQ 490
G G + + +L + N I+ G V+ R ATGV E
Sbjct: 181 -GLMEQTIFSGRRWSAANAYLKPALKRKNVEIIYGFAQRIVIEDGR-----ATGVEIE-- 232
Query: 491 YMGAKDICVVESKVTIVACGALSTPNLLKRSGL---------------KNANIGKNLHLH 535
G K V ++ IV+ + ++P LL SG+ +G NL H
Sbjct: 233 -RGGKIEVVKANREVIVSASSFNSPKLLMLSGIGPGEHLKEMGIEVKADRPGVGANLQDH 291
Query: 536 -----------PVTM-AW-GYFPKTSSSGEWPEEKKTSYEGGIMTAMSTTVGNFGKSGYG 582
PV++ +W +F + + +W K GG+ + F +S
Sbjct: 292 MEFYFQQVSTKPVSLYSWLPWFWQGVAGAQWLLSK-----GGLGASNQFEACAFLRS--- 343
Query: 583 AVIQTPAL-HPGMFSSLMPWVSGADIKLRMCKFSRTAHI-FVLARDQGSGTVNSP----- 635
P L P + +P D K H+ + L++ +GS T+ SP
Sbjct: 344 ----APGLKQPDIQYHFLPVAISYDGKAAAKSHGFQVHVGYNLSKSRGSVTLRSPDPKAD 399
Query: 636 --YSISYQMEAMDEENLKKGIEKILRILAAAGAEEI-GTHHCKGKIINVKKASSEEFERF 692
+Y A D E + + + A ++ G G+ + S EE + F
Sbjct: 400 PVLRFNYMSHAEDWEKFRHCVRLTRELFGQAAFDDYRGAEIQPGESVQ----SDEEIDAF 455
Query: 693 VKEESSRPLRDLSTPLSSAHQMGSCRMGI-DPKTSVVNQMGETWGVEGLYLADTSVFP 749
++E S+ H G+C+MG D +VV+ GVE L +AD+S+FP
Sbjct: 456 LREHLE----------SAYHPCGTCKMGAKDDPMAVVDPQTRVIGVEALRVADSSIFP 503
>sp|O34214|GADH1_PECCY Gluconate 2-dehydrogenase flavoprotein OS=Pectobacterium cypripedii
PE=1 SV=1
Length = 615
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 705 STPLSSAHQMGSCRMGIDPKTSVVNQMGETWGVEGLYLADTSVFPTALGVNPMVTVQAIA 764
+T + H G MG DPKTS VN+ ++W V +++ S FP LG NP V A+
Sbjct: 535 TTVYQTTHMSGGAIMGEDPKTSAVNRYLQSWDVPNVFVPGASAFPQGLGYNPTGMVAALT 594
Query: 765 YCTAQSV 771
Y +A+++
Sbjct: 595 YWSAKAI 601
Score = 34.7 bits (78), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305
K DAVVVG G G ++A L +AG V+ LE+G +
Sbjct: 28 KVDAVVVGFGWAGAIMAKELTEAGLNVVALERGPH 62
>sp|P64264|Y1310_MYCBO Uncharacterized GMC-type oxidoreductase Mb1310 OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb1310 PE=3
SV=1
Length = 528
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 123/531 (23%), Positives = 202/531 (38%), Gaps = 76/531 (14%)
Query: 271 KCDAVVVGSGSGGGLIAGVLA-KAGYKVLVLEKGS------YCARSNLSLLEGKTMDQMY 323
+ D VVVG+GS G ++A L+ V+ LE G + S L +D Y
Sbjct: 4 QSDYVVVGTGSAGAVVASRLSTDPATTVVALEAGPRDKNRFIGVPAAFSKLFRSEIDWDY 63
Query: 324 LAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDEYELKLFESDL--YK 381
L D + G +GG S++N ++ +EW + +D+ Y
Sbjct: 64 LTEPQPELDGREIYWPRGKVLGGSSSMNAMMWVRGFASDYDEWAARAGPRWSYADVLGYF 123
Query: 382 EAMEVVC--------ERMGVQ-----SEVEEEGFNNAVLRRGCKELGYPVNNIPRNSPPD 428
+E V + GV S A +E G+ P + P+
Sbjct: 124 RRIENVTAAWHFVSGDDSGVTGPLHISRQRSPRSVTAAWLAAARECGFAAAR-PNSPRPE 182
Query: 429 HYCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFE 488
+C + + G++ T++ +L + N +L G A V+ D + A GV E
Sbjct: 183 GFCE-TVVTQRRGARFSTADAYLKPAMRRKNLRVLTGATATRVVI----DGDRAVGV--E 235
Query: 489 FQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNAN---------------IGKNLH 533
+Q G I +V + A GA+++P LL SG+ + + +G NL
Sbjct: 236 YQSDGQTRIVYARREVVLCA-GAVNSPQLLMLSGIGDRDHLAEHDIDTVYHAPEVGCNLL 294
Query: 534 LHPVTMAWGYFPKTSSSGEWPEEKKTSYEGGIMTAMSTTVGNFGKSGYGAVIQTPALH-- 591
H VT+ K S + SY ++ N G++ YG V P L
Sbjct: 295 DHLVTVLGFDVEKDSLFAAEKPGQLISY---LLRRRGMLTSNVGEA-YGFVRSRPELKLP 350
Query: 592 -------PGMF--SSLMPWVS-GADIKLRMCKFSRTAHIFVLARDQGSGTVNSPYSISYQ 641
P F +L+P G + I + + D + V P +S
Sbjct: 351 DLELIFAPAPFYDEALVPPAGHGVVFGPILVAPQSRGQITLRSADPHAKPVIEPRYLS-D 409
Query: 642 MEAMDEENLKKGIEKILRILAAAGAEEIGTHHCKGKIINVKKASSEEFERFVKEESSRPL 701
+ +D + G+ RI A ++ G I + +S E + E++ L
Sbjct: 410 LGGVDRAAMMAGLRICARIAQARPLRDL-----LGSI--ARPRNSTELD-----EATLEL 457
Query: 702 RDLSTPLSSAHQMGSCRMGIDPKTSVVNQMGETWGVEGLYLADTSVFPTAL 752
+ + H MG+CRMG D + SVV+ GV+GL +AD SV P+ +
Sbjct: 458 ALATCSHTLYHPMGTCRMGSD-EASVVDPQLRVRGVDGLRVADASVMPSTV 507
>sp|P64263|Y1279_MYCTU Uncharacterized GMC-type oxidoreductase Rv1279/MT1316
OS=Mycobacterium tuberculosis GN=Rv1279 PE=3 SV=1
Length = 528
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 123/531 (23%), Positives = 202/531 (38%), Gaps = 76/531 (14%)
Query: 271 KCDAVVVGSGSGGGLIAGVLA-KAGYKVLVLEKGS------YCARSNLSLLEGKTMDQMY 323
+ D VVVG+GS G ++A L+ V+ LE G + S L +D Y
Sbjct: 4 QSDYVVVGTGSAGAVVASRLSTDPATTVVALEAGPRDKNRFIGVPAAFSKLFRSEIDWDY 63
Query: 324 LAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDEYELKLFESDL--YK 381
L D + G +GG S++N ++ +EW + +D+ Y
Sbjct: 64 LTEPQPELDGREIYWPRGKVLGGSSSMNAMMWVRGFASDYDEWAARAGPRWSYADVLGYF 123
Query: 382 EAMEVVC--------ERMGVQ-----SEVEEEGFNNAVLRRGCKELGYPVNNIPRNSPPD 428
+E V + GV S A +E G+ P + P+
Sbjct: 124 RRIENVTAAWHFVSGDDSGVTGPLHISRQRSPRSVTAAWLAAARECGFAAAR-PNSPRPE 182
Query: 429 HYCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFE 488
+C + + G++ T++ +L + N +L G A V+ D + A GV E
Sbjct: 183 GFCE-TVVTQRRGARFSTADAYLKPAMRRKNLRVLTGATATRVVI----DGDRAVGV--E 235
Query: 489 FQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNAN---------------IGKNLH 533
+Q G I +V + A GA+++P LL SG+ + + +G NL
Sbjct: 236 YQSDGQTRIVYARREVVLCA-GAVNSPQLLMLSGIGDRDHLAEHDIDTVYHAPEVGCNLL 294
Query: 534 LHPVTMAWGYFPKTSSSGEWPEEKKTSYEGGIMTAMSTTVGNFGKSGYGAVIQTPALH-- 591
H VT+ K S + SY ++ N G++ YG V P L
Sbjct: 295 DHLVTVLGFDVEKDSLFAAEKPGQLISY---LLRRRGMLTSNVGEA-YGFVRSRPELKLP 350
Query: 592 -------PGMF--SSLMPWVS-GADIKLRMCKFSRTAHIFVLARDQGSGTVNSPYSISYQ 641
P F +L+P G + I + + D + V P +S
Sbjct: 351 DLELIFAPAPFYDEALVPPAGHGVVFGPILVAPQSRGQITLRSADPHAKPVIEPRYLS-D 409
Query: 642 MEAMDEENLKKGIEKILRILAAAGAEEIGTHHCKGKIINVKKASSEEFERFVKEESSRPL 701
+ +D + G+ RI A ++ G I + +S E + E++ L
Sbjct: 410 LGGVDRAAMMAGLRICARIAQARPLRDL-----LGSI--ARPRNSTELD-----EATLEL 457
Query: 702 RDLSTPLSSAHQMGSCRMGIDPKTSVVNQMGETWGVEGLYLADTSVFPTAL 752
+ + H MG+CRMG D + SVV+ GV+GL +AD SV P+ +
Sbjct: 458 ALATCSHTLYHPMGTCRMGSD-EASVVDPQLRVRGVDGLRVADASVMPSTV 507
>sp|Q2KB43|BETA_RHIEC Choline dehydrogenase OS=Rhizobium etli (strain CFN 42 / ATCC
51251) GN=betA PE=3 SV=1
Length = 549
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 116/539 (21%), Positives = 197/539 (36%), Gaps = 95/539 (17%)
Query: 270 IKCDAVVVGSGSGGGLIAGVLAKAGYK-VLVLEKGSYCARSNLSL-------LEGKTMDQ 321
++ D V++GSGS G +A L++ G VLV+E G + + + K +
Sbjct: 1 MQADFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNW 60
Query: 322 MYLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCD------EYE--LK 373
YL+ ++ + G +GG S+IN ++ N W + Y L
Sbjct: 61 GYLSEPEPNLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYADVLP 120
Query: 374 LFESDLYKEAMEVVCERMGVQSEVEEEGFNNAVLR---RGCKELGYPVNNIPRNSPPDHY 430
F+ + E V+ GF N + R K+ G+ S + +
Sbjct: 121 YFKRMEHSHGGEEGWRGTDGPLHVQRGGFTNPLFRAFIEAGKQAGFETTEDYNGSKQEGF 180
Query: 431 CGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQ 490
G G + + +L + N I+ G V+ R ATGV E
Sbjct: 181 -GLMEQTIFAGRRWSAANAYLKPALKRDNVGIVYGLARRIVIENGR-----ATGVEIE-- 232
Query: 491 YMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNAN---------------IGKNLHLH 535
G + V ++ IV+ + ++P LL SG+ A +G NL H
Sbjct: 233 -RGGRTEVVKANREVIVSASSFNSPKLLMLSGIGPAKHLKEMGIEVKADRPGVGANLQDH 291
Query: 536 -----------PVTM-AW-GYFPKTSSSGEWPEEKKTSYEGGIMTAMSTTVGNFGKSGYG 582
PV++ +W +F + + +W K GG+ + F +S
Sbjct: 292 MEFYFQQVSTKPVSLYSWLPWFWQGVAGAQWLLSK-----GGLGASNQFEACAFLRS--- 343
Query: 583 AVIQTPAL-HPGMFSSLMPWVSGADIKLRMCKFSRTAHI-FVLARDQGSGTVNSP----- 635
P L P + +P D K H+ + L++ +GS T+ SP
Sbjct: 344 ----APGLKQPDIQYHFLPVAISYDGKAAAKSHGFQVHVGYNLSKSRGSVTLRSPDPKAD 399
Query: 636 --YSISYQMEAMDEENLKKGIEKILRILAAAGAEEIGTHHCKGKIINVKKA--SSEEFER 691
+Y D E + + I + +G I + S E+ +
Sbjct: 400 PVLRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDAY-----RGPEIQPGEGVQSDEQIDS 454
Query: 692 FVKEESSRPLRDLSTPLSSAHQMGSCRMGI-DPKTSVVNQMGETWGVEGLYLADTSVFP 749
F++E S+ H G+C+MG D +VV+ GV+GL +AD+S+FP
Sbjct: 455 FLREHLE----------SAYHPCGTCKMGAKDDPMAVVDPQTRVIGVDGLRVADSSIFP 503
>sp|B3PTE0|BETA_RHIE6 Choline dehydrogenase OS=Rhizobium etli (strain CIAT 652) GN=betA
PE=3 SV=1
Length = 549
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 115/539 (21%), Positives = 197/539 (36%), Gaps = 95/539 (17%)
Query: 270 IKCDAVVVGSGSGGGLIAGVLAKAGYK-VLVLEKGSYCARSNLSL-------LEGKTMDQ 321
++ D V++GSGS G +A L++ G VLV+E G + + + K +
Sbjct: 1 MQADFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNW 60
Query: 322 MYLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCD------EYE--LK 373
YL+ ++ + G +GG S+IN ++ N W + Y L
Sbjct: 61 GYLSEPEPNLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYADVLP 120
Query: 374 LFESDLYKEAMEVVCERMGVQSEVEEEGFNNAVLR---RGCKELGYPVNNIPRNSPPDHY 430
F+ + E V+ GF N + R K+ G+ + S + +
Sbjct: 121 YFKRMEHSHGGEEGWRGTDGPLHVQRGGFTNPLFRAFIEAGKQAGFETTDDYNGSKQEGF 180
Query: 431 CGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQ 490
G G + + +L + N ++ G V+ R ATGV E
Sbjct: 181 -GLMEQTIFSGRRWSAANAYLKPALKRKNVGMVYGLARKIVIEDGR-----ATGVEIE-- 232
Query: 491 YMGAKDICVVESKVTIVACGALSTPNLLKRSGL---------------KNANIGKNLHLH 535
G K V ++ IV+ + ++P LL SG+ +G NL H
Sbjct: 233 -RGGKVEVVKATREVIVSASSFNSPKLLMLSGIGPGQHLNDMGIAVKADRPGVGANLQDH 291
Query: 536 -----------PVTM-AW-GYFPKTSSSGEWPEEKKTSYEGGIMTAMSTTVGNFGKSGYG 582
PV++ +W +F + + +W K GG+ + F +S
Sbjct: 292 MEFYFQQVSTKPVSLYSWLPWFWQGVAGAQWLLSK-----GGLGASNQFEACAFLRS--- 343
Query: 583 AVIQTPAL-HPGMFSSLMPWVSGADIKLRMCKFSRTAHI-FVLARDQGSGTVNSP----- 635
P L P + +P D K H+ + L++ +GS T+ SP
Sbjct: 344 ----APGLKQPDIQYHFLPVAISYDGKAAAKSHGFQVHVGYNLSKSRGSVTLRSPDPKAE 399
Query: 636 --YSISYQMEAMDEENLKKGIEKILRILAAAGAEEIGTHHCKGKIINVKKA--SSEEFER 691
+Y D E + + I + +G I + S E+ +
Sbjct: 400 PVLRFNYMSHPEDWEKFRHCVRLTREIFGQTAFDAY-----RGPEIQPGEGVQSDEQIDA 454
Query: 692 FVKEESSRPLRDLSTPLSSAHQMGSCRMGI-DPKTSVVNQMGETWGVEGLYLADTSVFP 749
F++E S+ H G+C+MG D +VV+ GV+GL +AD+S+FP
Sbjct: 455 FLREHLE----------SAYHPCGTCKMGAKDDPMAVVDPQTRVIGVDGLRVADSSIFP 503
>sp|Q8UH55|BETA_AGRT5 Choline dehydrogenase OS=Agrobacterium tumefaciens (strain C58 /
ATCC 33970) GN=betA PE=3 SV=2
Length = 549
Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 116/540 (21%), Positives = 205/540 (37%), Gaps = 97/540 (17%)
Query: 270 IKCDAVVVGSGSGGGLIAGVLAKAG-YKVLVLEKGSYCARSNLSL-------LEGKTMDQ 321
++ D V+VGSGS G IA L++ G Y V+V+E G + + + K +
Sbjct: 1 MQADYVIVGSGSAGSAIAYRLSEDGRYSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNW 60
Query: 322 MYLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCD------------E 369
YL+ D+ + G +GG S+IN ++ N W +
Sbjct: 61 GYLSEPEPNLDNRRITAPRGKVIGGSSSINGLVYVRGHAEDFNRWEELGAQGWAYADVLP 120
Query: 370 YELKLFESDLYKEAMEVVCERMGVQSEVEEEGFNNAVLRRGCKELGYPVNNIPRNSPPDH 429
Y ++ S +E + VQ +A ++ G + G+ + + S +
Sbjct: 121 YFKRMEHSHGGEEGWRGTDGPLHVQRGPVSNPLFHAFIQAGA-QAGFELTDDYNGSKQEG 179
Query: 430 YCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEF 489
+ G +G + + +L + GN ++ G ++ R A GV E
Sbjct: 180 F-GLMEQTIHNGRRWSAANAYLKPALKRGNVTLVNGFARKVIIENGR-----AVGVEIER 233
Query: 490 QYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNA---------------NIGKNLHL 534
+ + V ++ IV+ + ++P LL SG+ A +G NL
Sbjct: 234 R---GRVETVKANREVIVSASSFNSPKLLMLSGIGPAAHLKDMGIEVKADRPGVGANLQD 290
Query: 535 H-----------PVTM-AW-GYFPKTSSSGEWPEEKKTSYEGGIMTAMSTTVGNFGKSGY 581
H PV++ +W +F + + +W K GG+ + F +S
Sbjct: 291 HMEFYFQQVSTKPVSLYSWLPWFWQGVAGAQWLLSK-----GGLGASNQFEACAFLRS-- 343
Query: 582 GAVIQTPAL-HPGMFSSLMPWVSGADIKLRMCKFSRTAHI-FVLARDQGSGTVNS--PYS 637
P L P + +P D K AH+ + L++ +G+ T+ S P+
Sbjct: 344 -----APGLKQPDIQYHFLPVAISYDGKAAAKSHGFQAHVGYNLSKSRGNVTLRSADPHD 398
Query: 638 -----ISYQMEAMDEENLKKGIEKILRILAAAGAEEI-GTHHCKGKIINVKKASSEEFER 691
+Y D E + + I ++ G G+ I + E+ +
Sbjct: 399 DPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDDFRGPEIQPGENIE----TDEQIDA 454
Query: 692 FVKEESSRPLRDLSTPLSSAHQMGSCRMGI--DPKTSVVNQMGETWGVEGLYLADTSVFP 749
F++E S+ H G+CRMG DP +VV+ GVEGL +AD+S+FP
Sbjct: 455 FLREHLE----------SAYHPCGTCRMGDRNDP-MAVVDPECRVIGVEGLRVADSSIFP 503
>sp|Q985M5|BETA_RHILO Choline dehydrogenase OS=Rhizobium loti (strain MAFF303099) GN=betA
PE=3 SV=1
Length = 550
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 113/553 (20%), Positives = 210/553 (37%), Gaps = 109/553 (19%)
Query: 269 VIKCDAVVVGSGSGGGLIAGVLAKAG-YKVLVLEKG------------SYCARSNLSLLE 315
+++ D V++GSGS G +A L++ G + V+V+E G + N+SL +
Sbjct: 1 MLEADFVIIGSGSAGSAMAYRLSEDGKHSVIVIEFGGSDIGPLIQMPSALSIPLNMSLYD 60
Query: 316 G--KTMDQMYLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDE---- 369
+ + +L G +LAT G +GG S+IN ++ + W +E
Sbjct: 61 WGFASEPEPHLGGRVLATP-------RGKVIGGSSSINGMVYVRGHARDFDHWAEEGATG 113
Query: 370 --------YELKLFESDLYKEAMEVVCERMGVQSEVEEEGFNNAVLRRGCKELGYPVNNI 421
Y ++ ++D ++ + VQ + A + G ++ G+ + +
Sbjct: 114 WGFADVLPYFKRMEDNDGGEDGWRGHGGPLHVQRGSRKNPLYGAFVEAG-RQAGFELTDD 172
Query: 422 PRNSPPDHYCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNV 481
S + + G G + + +L + N +++ G ++ +R
Sbjct: 173 YNGSKQEGF-GPMEQTISGGRRWSAASAYLKPALKRKNVSLVKGFARRVIIENQR----- 226
Query: 482 ATGVAFEFQYMGAKDICVVESKV-TIVACGALSTPNLLKRSGLKNAN------------- 527
A GV E K I VV+++ IVA ++++P +L SG+ A
Sbjct: 227 AIGVEIEAH----KQIQVVKARREVIVAASSINSPKILMLSGIGPAEHLRENGIAVVADR 282
Query: 528 --IGKNLHLH-----------PVTM--AWGYFPKTSSSGEWPEEKKTSYEGGIMTAMSTT 572
+G+NL H P+T+ F K +W ++ G+
Sbjct: 283 PGVGRNLQDHMELYIQQESTKPITLNSVLNPFSKALIGAQW-----LFFKSGLGATNHFE 337
Query: 573 VGNFGKSGYGAVIQTPALHPGMFSSLMPWVSGADIKLRMCKFSRTAHIFVL-ARDQGSGT 631
F +S G +P + +P D K AH+ + ++ +GS T
Sbjct: 338 AAAFVRSRAGVD------YPDIQYHFIPAAVRYDGKAAAKSHGFQAHVGPMRSKSRGSVT 391
Query: 632 VNSP-------YSISYQMEAMDEENLKKGIEKILRILAAAGAEEI-GTHHCKGKIINVKK 683
+ SP +Y D + I I + + G G +
Sbjct: 392 LRSPDPKAKPVIRFNYMSHPDDWTEFRHCIRLTREIFGQSAFDAFRGQEISPGSHVQ--- 448
Query: 684 ASSEEFERFVKEESSRPLRDLSTPLSSAHQMGSCRMG-IDPKTSVVNQMGETWGVEGLYL 742
S ++ + F+++ + S+ H G+C+MG D TSVV+ GV+GL +
Sbjct: 449 -SDDDLDVFIRDHAE----------SAYHPCGTCKMGRADDVTSVVDPECRVIGVDGLRV 497
Query: 743 ADTSVFPTALGVN 755
AD+S+FP N
Sbjct: 498 ADSSIFPRVTNGN 510
>sp|Q53U15|NEOG_STRFR Paromamine 6'-oxidase OS=Streptomyces fradiae GN=neoG PE=1 SV=1
Length = 541
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 710 SAHQMGSCRMGIDPKTSVVNQMGETWGVEGLYLADTSVFPTALGVNPMVTVQAIAYCTAQ 769
S H G+CR G DP TSVV+ G +Y+ D P G+NP +T+QA A +A+
Sbjct: 468 SCHLHGTCRAGDDPATSVVDGWGRVHSAPNVYVVDGGFMPYPGGLNPTLTIQAHALRSAK 527
Query: 770 SVL-DVLRRKKSN 781
+V D++ R ++
Sbjct: 528 AVAGDLVSRHTAH 540
>sp|Q7X2H8|CHOX_ARTGO Choline oxidase OS=Arthrobacter globiformis GN=codA PE=1 SV=1
Length = 546
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 136/351 (38%), Gaps = 63/351 (17%)
Query: 440 DGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICV 499
DG++ +S +++ +V N +L G A +++ R TGV G
Sbjct: 204 DGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVFDADRR---CTGVDIVDSAFGHTHRLT 260
Query: 500 VESKVTIVACGALSTPNLLKRSGLKNA---------------NIGKNLHLHP--VTMAWG 542
++V +++ GA+ TP LL SG+ A +G++L HP V
Sbjct: 261 ARNEV-VLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVGEHLQDHPEGVVQFEA 319
Query: 543 YFPKTSSSGEW-------PEEKKTSYEGGIMTAMSTTVG-NFGKSGYGAVIQTPALHPGM 594
P + S +W P E +M S N + GY +L P +
Sbjct: 320 KQPMVAESTQWWEIGIFTPTEDGLDRPDLMMHYGSVPFDMNTLRHGYPTTENGFSLTPNV 379
Query: 595 FSSLMPWVSGADIKLRMCKFSRTAHIFVLARDQGSGTVNSPYSISYQMEAMDEENLKKGI 654
+ S ++LR F RD+ V+ Y E D + GI
Sbjct: 380 THAR----SRGTVRLRSRDF----------RDKP--MVDPRYFTD--PEGHDMRVMVAGI 421
Query: 655 EKILRILA-AAGAEEIGTHHCKGKIINVKKASSEEFERFVKEESSRPLRDLSTPLSSAHQ 713
K I A A AE G G V+ + EE + ++++ + + H
Sbjct: 422 RKAREIAAQPAMAEWTGRELSPG----VEAQTDEELQDYIRKTHN----------TVYHP 467
Query: 714 MGSCRMG-IDPKTSVVNQMGETWGVEGLYLADTSVFPTALGVNPMVTVQAI 763
+G+ RMG ++ + S ++ GV GL +AD SV P + VNP +TV I
Sbjct: 468 VGTVRMGAVEDEMSPLDPELRVKGVTGLRVADASVMPEHVTVNPNITVMMI 518
>sp|Q9WWW2|ALKJ_PSEPU Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida GN=alkJ PE=3
SV=1
Length = 552
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 113/554 (20%), Positives = 204/554 (36%), Gaps = 82/554 (14%)
Query: 273 DAVVVGSGSGGGLIAGVL-AKAGYKVLVLEKGSYCARSNLSLLEG-------KTMDQMYL 324
D ++VG+GS G ++A L A +V +LE G + + G K ++ +
Sbjct: 3 DYIIVGAGSAGCVLANRLSADPSKRVCLLEAGPRDTNPLIHMPLGIALLSNSKKLNWAFQ 62
Query: 325 AGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCD---EY-----ELKLFE 376
++ + G T+GG S+IN I+ + W EY LF+
Sbjct: 63 TAPQQHLNERSLFWPRGKTLGGSSSINAMVYIRGHEEDYQAWEQAGGEYWGWKRAFALFK 122
Query: 377 SDLYKEAMEVVCERMGVQSEVEEEGFNNA-VLRRGCKELGYPVN---NIPRNSPPDHYCG 432
+ + + G E+ + L + + G N N G
Sbjct: 123 KLEHNQRFDK-SNYHGTDGELAVSDLKDLNPLSKSFVQAGMEAKISFNGDFNGAHQEGVG 181
Query: 433 WCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYM 492
+ + K G + ++ +L D+++ N I+ A +VL + R+ A GV++ Q
Sbjct: 182 FYQVTQKHGQRWSSARAFLHDVIDRPNLDIITEAHATKVLFEDRK----AVGVSY-IQKN 236
Query: 493 GAKDICVVESKVTIVACGALSTPNLLKRSGLKNA---------------NIGKNLHLH-- 535
+ + +S I++ GA++TP LL SG+ A +GKNL H
Sbjct: 237 MHQQVKTTDSGEVILSLGAVNTPQLLMLSGVGAAAELKEHGIALVHDLPEVGKNLQDHLD 296
Query: 536 -----------PVTMAWGYFPKTSSSGEWPEEKKTSYEGGIMTAMSTTVGNFGKSGYGAV 584
P+ +A+ + P+ G G +T+ G F KS
Sbjct: 297 ITLMCAANSRTPIGVAFSFIPR----GLVGLFSYIFKRKGFLTSNVAESGGFVKS----- 347
Query: 585 IQTPAL-HPGMFSSLMPWVSGADIKLRMCKFSRTAHIF-VLARDQGSGTVNSPYSISYQM 642
+P P + +P + + T HI +L + +G + S + +
Sbjct: 348 --SPERDRPNLQFHFLPTYLKDHGRKIAVGYGYTLHICDLLPKSRGRIGLKSANPMDDPL 405
Query: 643 ----EAMDEENLKKGIEKILRILAAAGAEEIGTHHCKGKIINVKKASSEEFERFVKEESS 698
D E++K I I A A + H + + S +E ++ +
Sbjct: 406 IDPNYLSDPEDIKTMIAGIKIGRAIFDAPSMAKHFKREIVPGPAVTSDDEIVADIRSRAE 465
Query: 699 RPLRDLSTPLSSAHQMGSCRMGIDPKTSVVNQMGETWGVEGLYLADTSVFPTALGVNPMV 758
+ H +G+CRMG DP SVV+ + G+ + + D S+ P + N
Sbjct: 466 ----------TIYHPVGTCRMGKDP-ASVVDPCLQVRGLRNIRVVDASIMPNLVAGNTNA 514
Query: 759 TVQAIAYCTAQSVL 772
IA A+ ++
Sbjct: 515 PTIMIAENAAEIIV 528
>sp|Q1MJU4|BETA_RHIL3 Choline dehydrogenase OS=Rhizobium leguminosarum bv. viciae (strain
3841) GN=betA PE=3 SV=1
Length = 549
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 112/539 (20%), Positives = 196/539 (36%), Gaps = 95/539 (17%)
Query: 270 IKCDAVVVGSGSGGGLIAGVLAKAGYK-VLVLEKGSYCARSNLSL-------LEGKTMDQ 321
++ D V++GSGS G +A L++ G V+V+E G + + + K +
Sbjct: 1 MQADFVIIGSGSAGSALAYRLSEGGKNSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNW 60
Query: 322 MYLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCD------EYE--LK 373
YL+ ++ + G +GG S+IN ++ N W + Y L
Sbjct: 61 GYLSEPEANLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYADVLP 120
Query: 374 LFESDLYKEAMEVVCERMGVQSEVEEEGFNNAVLR---RGCKELGYPVNNIPRNSPPDHY 430
F+ + E V+ GF N + + K+ G+ S + +
Sbjct: 121 YFKRMEHSHGGEEGWRGTDGPLHVQRGGFTNPLFQAFVEAGKQAGFETTEDYNGSKQEGF 180
Query: 431 CGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQ 490
G G + + +L + N I+ G V+ R ATGV E
Sbjct: 181 -GLMEQTIFGGRRWSAANAYLKPALKRDNVKIVYGLAQRIVIEDGR-----ATGVEIE-- 232
Query: 491 YMGAKDICVVESKVTIVACGALSTPNLLKRSGL---------------KNANIGKNLHLH 535
+ V ++ IV+ + ++P LL SG+ +G NL H
Sbjct: 233 -RNGRIEVVKANREVIVSASSFNSPKLLMLSGIGPGQHLQDMGIAVKADRPGVGANLQDH 291
Query: 536 -----------PVTM-AW-GYFPKTSSSGEWPEEKKTSYEGGIMTAMSTTVGNFGKSGYG 582
PV++ +W +F + + +W + GG+ + F +S
Sbjct: 292 MEFYFQQVSTKPVSLYSWLPWFWQGVAGAQWLLSR-----GGLGASNQFEACAFLRS--- 343
Query: 583 AVIQTPAL-HPGMFSSLMPWVSGADIKLRMCKFSRTAHI-FVLARDQGSGTVNSP----- 635
P L P + +P D K H+ + L++ +GS ++ S
Sbjct: 344 ----APGLKQPDIQYHFLPVAISYDGKAAAKSHGFQVHVGYNLSKSRGSVSLRSADPKAD 399
Query: 636 --YSISYQMEAMDEENLKKGIEKILRILAAAGAEEIGTHHCKGKIINVKKA--SSEEFER 691
+Y A D E + + I + H +G I + S EE +
Sbjct: 400 PVLRFNYMSHAEDWEKFRHCVRLTREIFGQSA-----FHDYRGPEIQPGEGVQSDEEIDA 454
Query: 692 FVKEESSRPLRDLSTPLSSAHQMGSCRMGI-DPKTSVVNQMGETWGVEGLYLADTSVFP 749
F++E S+ H G+CRMG D +VV+ G++GL +AD+S+FP
Sbjct: 455 FLREHLE----------SAYHPCGTCRMGAKDDPMAVVDPQTRVIGIDGLRVADSSIFP 503
>sp|P18173|DHGL_DROME Glucose dehydrogenase [acceptor] OS=Drosophila melanogaster GN=Gld
PE=3 SV=3
Length = 625
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 117/536 (21%), Positives = 214/536 (39%), Gaps = 78/536 (14%)
Query: 273 DAVVVGSGSGGGLIAGVLAKA-GYKVLVLEKG------SYCARSNLSLLEGKTMDQMYLA 325
D +V+G GS G ++A L++ +KVL++E G + L+ + G +D Y
Sbjct: 66 DFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFI-GSDIDYRYNT 124
Query: 326 G----GMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDEYELKLFESDL-- 379
L++ + G +GG S +N ++ + ++W + +D+
Sbjct: 125 EPEPMACLSSMEQRCYWPRGKVLGGTSVLNGMMYVRGNREDYDDWAADGNPGWAYNDVLP 184
Query: 380 YKEAMEVVCERMGVQSEVEEEG-------------FNNAVLRRGCKELGYPVNNIPRNSP 426
+ + E + V +E +G + A+L+ G +ELG+ V+++ N
Sbjct: 185 FFKKSEDNLDLDEVGTEYHAKGGLLPVGKFPYNPPLSYAILKAG-EELGFSVHDL--NGQ 241
Query: 427 PDHYCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVL-HKKRRDRNVATGV 485
+ ++G + ++ +L N IL A ++L H ++ GV
Sbjct: 242 NSTGFMIAQMTARNGIRYSSARAFLRPARMRNNLHILLNTTATKILIHPHTKN---VLGV 298
Query: 486 AFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSG------LKNAN---------IGK 530
Q+ + I V K +++ GA+++P++L SG L+ N +GK
Sbjct: 299 EVSDQFGSTRKILV--KKEVVLSAGAVNSPHILLLSGVGPKDELQQVNVRTVHNLPGVGK 356
Query: 531 NLHLHPVTMAWGYFPKTSSSG--EWPEEKK-TSYEGGIM--TAMSTTVGNFGKSGYGAVI 585
NLH H VT +F + + W + + G+M T +S + Y
Sbjct: 357 NLHNH-VTYFTNFFIDDADTAPLNWATAMEYLLFRDGLMSGTGISDVTAKLA-TRYADSP 414
Query: 586 QTPALHPGMFSSLMPWVSGADIKLRMCKFSRTAHIF---VLARDQG------SGTVNSPY 636
+ P L L + + SR+ IF + R +G + + P
Sbjct: 415 ERPDLQLYFGGYLASCARTGQVGELLSNNSRSIQIFPAVLNPRSRGFIGLRSADPLEPPR 474
Query: 637 SIS-YQMEAMDEENLKKGIEKILRILAAAGAEEIGTHHCKGKIINVKKASSEEFERFVKE 695
++ Y D + L +GI+ ++R+ ++ G K VK + F
Sbjct: 475 IVANYLTHEQDVKTLVEGIKFVIRLSQTTPLKQYGMRLDK---TVVKGCEAHAFGSDAYW 531
Query: 696 ESSRPLRDLSTPLSSAHQMGSCRMGI--DPKTSVVNQMGETWGVEGLYLADTSVFP 749
E + +R + P HQ GSC+MG DP +VVN G+ GL + DTS+ P
Sbjct: 532 ECA--VRQNTGP--ENHQAGSCKMGPSHDP-MAVVNHELRVHGIRGLRVMDTSIMP 582
>sp|B9JBA2|BETA_AGRRK Choline dehydrogenase OS=Agrobacterium radiobacter (strain K84 /
ATCC BAA-868) GN=betA PE=3 SV=1
Length = 549
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 127/559 (22%), Positives = 207/559 (37%), Gaps = 133/559 (23%)
Query: 270 IKCDAVVVGSGSGGGLIAGVLAKAG-YKVLVLEKGSY----CARSNLSLLEGKTMDQM-- 322
++ D V++GSGS G +A L++ G + V+VLE G + +L +MD+
Sbjct: 1 MQADFVIIGSGSAGSAMASRLSEDGKHTVIVLEFGGSDVGPFIQMPAALAWPMSMDRYNW 60
Query: 323 -YLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDEYELKLFESDL-- 379
YL+ ++ + G +GG S+IN ++ N W + +D+
Sbjct: 61 GYLSEPEPQLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGAQGWAYADVLP 120
Query: 380 YKEAMEVVCERMGVQSEVEEEGFNNA----VLRRG-------------CKELGYPVNNIP 422
Y + ME S EEG+ +RRG K+ G+
Sbjct: 121 YFKRME--------HSHGGEEGWRGTDGPLHVRRGDARNPLFHAFIEAGKQAGFEAT--- 169
Query: 423 RNSPPDHYCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAI-----LPGCEAIEVLHKKRR 477
+ Y G G ++G TW+ ++ + + P E I +K
Sbjct: 170 -----EDYNG----GKQEGFGLMEQTTWMGRRWSAATAYLKPALKRPNVELIRCFARKVV 220
Query: 478 DRN-VATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGL------------- 523
N ATGV E + G +I S+V IV+ + ++P LL SG+
Sbjct: 221 IENGRATGV--EIERGGKIEIVKANSEV-IVSASSFNSPKLLMLSGIGPGQHLQEMGIEV 277
Query: 524 --KNANIGKNLHLHPVTMAWGYFPKTSSSGEWPEEKKTSYEGGIMTAMSTTVGN---FGK 578
+G NL H M + YF +TS K S + M VG F K
Sbjct: 278 KIDRPGVGANLQDH---MEF-YFQQTSL-------KPVSLYSWLPWYMQGIVGAQWMFFK 326
Query: 579 SGYGAVIQTPAL----------HPGMFSSLMPWVSGADIKLRMCKFSRTAHI-FVLARDQ 627
SG G Q A P + +P D K AH+ + L++ +
Sbjct: 327 SGLGTSNQFEACAFLRSAPGVKQPDIQYHFLPVAISYDGKAAAKSHGFQAHVGYNLSKSR 386
Query: 628 GSGTVNSP-------YSISYQMEAMDEENLKKGIEKILRILAAAGAEEI-GTHHCKGKII 679
G+ T+ S +Y D E + + I ++ G G +
Sbjct: 387 GAVTLRSSDPKADPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDDYRGPEIQPGPDV 446
Query: 680 NVKKASSEEFERFVKEESSRPLRDLSTPLSSAHQMGSCRMG--------IDPKTSVVNQM 731
+ ++ + F++E S+ H G+C+MG +DP T V+
Sbjct: 447 Q----TDDQIDAFLREHLE----------SAYHPCGTCKMGSKDDPMAVVDPDTRVI--- 489
Query: 732 GETWGVEGLYLADTSVFPT 750
GVEGL +AD+S+FP+
Sbjct: 490 ----GVEGLRVADSSIFPS 504
>sp|Q57307|CHOD_MYCTU Cholesterol oxidase OS=Mycobacterium tuberculosis GN=choD PE=1 SV=1
Length = 578
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 47/230 (20%)
Query: 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY-----CARSNLSLLEGKTMDQMYLAGG 327
D +++GSG GG + A L + GY+V VLE G A+++ L + ++ G
Sbjct: 6 DVLIIGSGFGGSVTALRLTEKGYRVGVLEAGRRFSDEEFAKTSWDLRKFLWAPRLGCYGI 65
Query: 328 MLATDDMGVILLAGSTVGGGSTINWSASIKTPKH---VANEWCDEYELKLFESDLYKEAM 384
V++LAG+ VGGGS +N++ ++ P +W + + Y++A
Sbjct: 66 QRIHPLRNVMILAGAGVGGGS-LNYANTLYVPPEPFFADQQWSHITDWRGELMPHYQQAQ 124
Query: 385 EVVCERMGVQSEVEEEGFNNA--VLRRGCKELGY-------PV--------NNIPRNSPP 427
+ +GV V+ F +A +++ E+G+ PV P + P
Sbjct: 125 RM----LGV---VQNPTFTDADRIVKEVADEMGFGDTWVPTPVGVFFGPDGTKTPGKTVP 177
Query: 428 DHY-------------CGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILP 464
D Y CG C GC+ G+K + +L L S + ++P
Sbjct: 178 DPYFGGAGPARTGCLECGCCMTGCRHGAKNTLVKNYL-GLAESAGAQVIP 226
Score = 38.9 bits (89), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 704 LSTPLSSAHQMGSCRMGIDPKTSVVNQMGETWGVEGLYLADTSVFPTALGVNPMVTVQAI 763
+ PL+ AH +G +G DP+ V++ +G LY+ D + LGVNP +++ A
Sbjct: 463 FNIPLT-AHFLGGAVIGDDPEHGVIDPYHRVYGYPTLYVVDGAAISANLGVNPSLSIAAQ 521
Query: 764 A 764
A
Sbjct: 522 A 522
>sp|Q9L4K0|BETA2_CHRSD Choline dehydrogenase OS=Chromohalobacter salexigens (strain DSM
3043 / ATCC BAA-138 / NCIMB 13768) GN=betA PE=1 SV=1
Length = 558
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 122/575 (21%), Positives = 212/575 (36%), Gaps = 101/575 (17%)
Query: 267 SLVIKCDAVVVGSGSGGGLIAGVLAK-AGYKVLVLEKGSYCARSNLSL---------LEG 316
S + D +++G+GS G ++A L + + VL+LE G R + L+G
Sbjct: 2 SQATEFDYIIIGAGSAGNVLATRLTEDSDVSVLLLEAGGPDYRFDFRTQMPAALAYPLQG 61
Query: 317 KTMDQMYLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDEYELKLFE 376
K + + D+ + G +GG S IN I+ + W + L+ ++
Sbjct: 62 KRYNWAFETDPEPHMDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDHWAKQPGLEEWD 121
Query: 377 S----DLYK--EAMEVVCERM----GVQSEVEEEGFNNAVLR---RGCKELGYP----VN 419
+K E ++ G S + NN + R K+ GYP VN
Sbjct: 122 YLSCLPYFKKSETRDIGPNDYHGGDGPVSVTTPKAGNNPLYRTFIEAGKQAGYPETEDVN 181
Query: 420 NIPRNS--PPDHYCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGC--EAIEVLHKK 475
+ P D + G + T+ +L N I + IE K+
Sbjct: 182 GYQQEGFGPMDRFV------TPKGRRASTARGYLDTAKQRSNLTIETRAVTDVIEFEGKR 235
Query: 476 RRDRNVATGVAFEFQYMGAKDICVVESKVTIVACG-ALSTPNLLKRSGLKNAN------- 527
A GV +E + + ++ ++ CG A+++P +L+RSG+ N
Sbjct: 236 ------AVGVRYEQKGQPKQ----ARARREVLLCGGAIASPQILQRSGVGNPEWLKELGI 285
Query: 528 --------IGKNLHLHPVTMAWGYFPKTSSSG----EWPEEKKTSYEGGIMTAMSTTVGN 575
+G+NL H + M Y K S +W + K E
Sbjct: 286 PVVHELPGVGENLQDH-LEMYIQYECKEPISLYPALKWYNQPKIGAEWLFKGTGVGASNQ 344
Query: 576 FGKSGYGAVIQTPALHPGMFSSLMPWVSGADIKLRMCKFSRTAHIFVLARDQGSG----T 631
F G+ + P + +P + K + AH+ + R + G T
Sbjct: 345 FESCGF-IRSRDDEEWPNLQYHFLPIAISYNGKSAVQAHGFQAHVGSM-RSESRGRIRLT 402
Query: 632 VNSPYS-----ISYQMEAMDEENLKKGIEKILRILAAAGAEEIGTHHCKGKIINVKK--A 684
P++ +Y + D E + I I+A + +G+ I+
Sbjct: 403 SKDPHAAPSILFNYMAKEKDWEEFRDAIRLTREIIAQPAFDRY-----RGREISPGPDVQ 457
Query: 685 SSEEFERFVKEESSRPLRDLSTPLSSAHQMGSCRMGIDPKTSVVNQMGETWGVEGLYLAD 744
S EE + FVK+ + ++ H GSCRMG + +V + G G+EGL + D
Sbjct: 458 SDEELDNFVKQHAE----------TAYHPCGSCRMG-EGDMAVTDAQGRVHGLEGLRVVD 506
Query: 745 TSVFPTALGVNPMVTVQAIAYCTAQSVLDVLRRKK 779
S+FP V P + A A+ + D +R ++
Sbjct: 507 ASLFP----VIPTGNLNAPTIMLAEKIADRIRGRE 537
>sp|Q6D6D9|BETA_ERWCT Choline dehydrogenase OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=betA PE=3 SV=1
Length = 559
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 118/579 (20%), Positives = 214/579 (36%), Gaps = 115/579 (19%)
Query: 270 IKCDAVVVGSGSGGGLIAGVLAK-AGYKVLVLEKGSYCARSNLSL---------LEGKTM 319
++ D +++G+GS G ++A L + + VL+LE G R + L+GK
Sbjct: 1 MEYDYIIIGAGSAGNVLAARLTEESDVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRY 60
Query: 320 DQMYLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEW------------- 366
+ Y +D + G +GG S IN I+ + W
Sbjct: 61 NWAYETDPEPHMNDRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWATMSGLEDWSYLD 120
Query: 367 CDEYELKLFESDL----YKEA---MEVVCERMGVQSEVEEEGFNNAVLRRGCKELGYPVN 419
C Y K D+ Y A + V +MG E F+ A++ G + GYP
Sbjct: 121 CLPYFRKAETRDVGANDYHGASGPVSVTTPKMG-----NNELFH-AMVEAGV-QAGYPRT 173
Query: 420 NIPRNSPPDHYCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDR 479
+ + + G + T+ +L + N I+ +L +R
Sbjct: 174 DDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKSRKNLTIVTHALTDRILFDGKR-- 231
Query: 480 NVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNAN------------ 527
A GVA+ + G + ++ GA+++P +L+RSG+ +
Sbjct: 232 --AVGVAY---FKGESAQTAKARREVLLCAGAIASPQILQRSGVGPKDLLQRLDISVVHD 286
Query: 528 ---IGKNLHLH-----------PVTM--AWGYFPKTSSSGEWPEEKKTSYEG-GIMTAMS 570
+G+NL H PV++ A +F + EW + G GI +
Sbjct: 287 LPGVGENLQDHLEMYLQYACKEPVSLYPALQWFNQPKIGAEW------LFNGTGIGASNQ 340
Query: 571 TTVGNFGKSGYGAVIQTPALHPGMFSSLMPWVSGADIKLRMCKFSRTAHIFVL-ARDQGS 629
G F +S + P + +P + + + AH+ + + +G
Sbjct: 341 FEAGGFIRS------RDEFTWPNIQYHFLPVAINYNGSNAVKEHGFQAHVGSMRSLSRGR 394
Query: 630 GTVNSPYS-------ISYQMEAMDEENLKKGIEKILRILAAAGAEEIGTHHCKGKIINVK 682
V S + +Y D + + I I+A ++ +G+ I+
Sbjct: 395 VQVRSKDAREHPSILFNYMSTEQDWQEFRDAIRITREIMAQPALDKY-----RGREISPG 449
Query: 683 KA--SSEEFERFVKEESSRPLRDLSTPLSSAHQMGSCRMGIDPKTSVVNQMGETWGVEGL 740
A + EE + F++ + ++ H SC+MG D SVV+ G G+EGL
Sbjct: 450 LAVQTDEELDEFIRTHAE----------TAFHPSCSCKMGED-DMSVVDGQGCVHGMEGL 498
Query: 741 YLADTSVFPTALGVNPMVTVQAIAYCTAQSVLDVLRRKK 779
+ D S+ P + N + A A+ + D +RR++
Sbjct: 499 RVVDASIMPQIITGN----LNATTIMIAEKIADRIRRRQ 533
>sp|A6X2G7|BETA_OCHA4 Choline dehydrogenase OS=Ochrobactrum anthropi (strain ATCC 49188 /
DSM 6882 / NCTC 12168) GN=betA PE=3 SV=1
Length = 549
Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 112/543 (20%), Positives = 191/543 (35%), Gaps = 103/543 (18%)
Query: 270 IKCDAVVVGSGSGGGLIAGVLAKAG-YKVLVLEKGSYCARSNLSL-------LEGKTMDQ 321
++ D V++GSGS G +A L++ G Y V+V+E G + + + +T D
Sbjct: 1 MEADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDW 60
Query: 322 MYLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDE------------ 369
+ ++ G +GG S+IN ++ + W +
Sbjct: 61 GFSTEPEPHIGGRSLVTPRGKVLGGSSSINGMVYVRGHARDYDHWSESGARGWAYADVLP 120
Query: 370 YELKLFESDLYKEAMEVVCERMGVQSEVEEEGFNNAVLRRGCKELGYPVNNIPRNSPPDH 429
Y ++ S +E + +Q + +A + G E G+ V N
Sbjct: 121 YFKRMENSSGGQEGWRGTNGPLYIQRGKRDNPLFHAFVEAG-HEAGFEVTE-DYNGEKQE 178
Query: 430 YCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEF 489
G +G + + +L + N ++ G VL KR A GV E
Sbjct: 179 GFGPMEQTIHNGRRWSAANAYLKPALKRPNVKLVKGLARKIVLEGKR-----AVGVEIE- 232
Query: 490 QYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNA---------------NIGKNLHL 534
G + + I+A ++++P LL SG+ A +G+NL
Sbjct: 233 --AGRSFSTIRARREVIIAASSINSPKLLMLSGIGPAAQLKEHGIEVVADRPGVGQNLQD 290
Query: 535 H-----------PVTM--AWGYFPKTSSSGEWPEEKKTSYEGGIMTAMSTTVGNFGKSGY 581
H P+T+ F K EW ++ G F +S
Sbjct: 291 HLEVYIQQECTQPITLYSKLNLFSKAKIGAEW-----LFFKTGDGATNHFESAAFLRSKA 345
Query: 582 GAVIQTPALHPGMFSSLMPWVSGADIKLRMCKFSRTAHIFVL-ARDQGSGTVNSP----- 635
G +P + +P D K AH+ + ++ +GS T+ S
Sbjct: 346 GVE------YPDIQYHFLPVAIRYDGKAAAQSHGFQAHVGPMRSKSRGSVTLRSANPREK 399
Query: 636 --YSISYQMEAMDEENLKKGIEKILRILAAA------GAEEIGTHHCKGKIINVKKASSE 687
+Y D + + + I A GAE H + S +
Sbjct: 400 PVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFNPYRGAEIQPGAHVQ---------SDD 450
Query: 688 EFERFVKEESSRPLRDLSTPLSSAHQMGSCRMG-IDPKTSVVNQMGETWGVEGLYLADTS 746
E + F+KE S+ H G+C+MG +D +VV+ GVEGL +AD+S
Sbjct: 451 EIDNFIKEHVE----------SAFHPCGTCKMGAVDDPMAVVDAECRVIGVEGLRVADSS 500
Query: 747 VFP 749
+FP
Sbjct: 501 IFP 503
>sp|P18172|DHGL_DROPS Glucose dehydrogenase [acceptor] OS=Drosophila pseudoobscura
pseudoobscura GN=Gld PE=3 SV=4
Length = 625
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 128/551 (23%), Positives = 215/551 (39%), Gaps = 78/551 (14%)
Query: 273 DAVVVGSGSGGGLIAGVLAKA-GYKVLVLEKG------SYCARSNLSLLEGKTMDQMYLA 325
D +V+G GS G ++A L++ +KVL++E G + L+ + G +D Y
Sbjct: 66 DFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFI-GSDIDYRYNT 124
Query: 326 G----GMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDE------YE--LK 373
L++ + G +GG S +N I+ + ++W + Y+ L
Sbjct: 125 EPERMACLSSMEQRCYWPRGKVLGGTSVMNGMMYIRGNREDYDDWAAQGNPGWSYQDVLP 184
Query: 374 LF---ESDLYKEAMEVVCERMGVQSEVEEEGFNN----AVLRRGCKELGYPVNNIPRNSP 426
F E +L +A+ G V + +N A+L+ G +E+G+ V ++ N
Sbjct: 185 FFKKSEDNLELDAVGTEYHAKGGLLPVGKFPYNPPLSYALLKAG-EEMGFSVQDL--NGQ 241
Query: 427 PDHYCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVL-HKKRRDRNVATGV 485
+ ++G + ++ +L N IL +VL H ++ GV
Sbjct: 242 NSTGFMIAQMTARNGIRYSSARAFLRPARMRNNLHILLNTTVTKVLIHPGTKN---VVGV 298
Query: 486 AFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSG------LKNAN---------IGK 530
Q+ + I V K IV+ GA+++P +L SG L+ N +GK
Sbjct: 299 EVSDQFGSMRKILV--KKEVIVSGGAVNSPQILLLSGVGPKEDLQKVNVRPVHHLPGVGK 356
Query: 531 NLHLHPVTMAWGYFPKTSSSG--EWPEEKK-TSYEGGIM--TAMSTTVGNFGKSGYGAVI 585
NLH H V +F + + W + + G+M T +S + +
Sbjct: 357 NLHNH-VAYFTNFFIDDADTAPLNWATAMEYLLFRDGLMSGTGISDVTAKMA-TRWADRP 414
Query: 586 QTPALHPGMFSSLMPWVSGADIKLRMCKFSRTAHIF---VLARDQGSGTVNS-----PYS 637
P L L + + SR IF + + +G T+ S P
Sbjct: 415 NLPDLQLYFGGYLASCARTGQVGELLSNNSRAIQIFPAVLNPKSRGYITLRSADPLDPPR 474
Query: 638 I--SYQMEAMDEENLKKGIEKILRILAAAGAEEIGTHHCKGKIINVKKASSEEFERFVKE 695
I +Y + D + L +GI+ +R+ + ++ G K VK S F
Sbjct: 475 IFANYLTDERDVKTLVEGIKFAIRLSQTSPLKQYGMRLDK---TVVKGCESHAFASDAYW 531
Query: 696 ESSRPLRDLSTPLSSAHQMGSCRMGI--DPKTSVVNQMGETWGVEGLYLADTSVFPTALG 753
E + +R + P HQ GSC+MG DP +VVN GV GL + DTS+ P
Sbjct: 532 ECA--VRQNTGP--ENHQAGSCKMGPSHDP-MAVVNHELRVHGVRGLRVMDTSIMPKVTA 586
Query: 754 VNPMVTVQAIA 764
N IA
Sbjct: 587 GNTHAPAVMIA 597
>sp|P46371|YTH2_RHOER Uncharacterized GMC-type oxidoreductase in thcA 5'region
OS=Rhodococcus erythropolis PE=3 SV=1
Length = 493
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 114/540 (21%), Positives = 193/540 (35%), Gaps = 111/540 (20%)
Query: 272 CDAVVVGSGSGGGLIAGVLAK-AGYKVLVLEKGSYCARSNLSLLEGKTMDQMYLAGGMLA 330
D +VVG G+ G ++A L++ V++LE GS RS L L + D L G +
Sbjct: 7 ADFLVVGGGTCGCVVAARLSEDPSATVMLLESGS-GYRSALELPD-VLGDPYRLPVGPAS 64
Query: 331 ----------TDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDEYEL-------- 372
T + G T+GG +N + ++ + W +
Sbjct: 65 EYTWTYPVELTPRRASTIARGRTLGGSGAVNGAYFMRATRADFENWPSAWRYDDVLPYFK 124
Query: 373 -----KLFESDLYKEAMEVVCERMGVQSEVEEEG-FNNAVLRRGCKELGYPVNNIPRNSP 426
+ FES+ + A + ER G F+ A L G+P +++ +N+P
Sbjct: 125 KSETDRDFESEFHGTAGPIPVERRAWDQLHPLSGEFHAAAL-----GAGFP-DDVDKNAP 178
Query: 427 PDHYCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVA 486
G L D + T+ +L+ ++ N + G I ++ R A GV
Sbjct: 179 DSFGVGRVPLNVADHRRISTAIGYLMPALHRPNLRVESGVNVIRIVFSGTR----AVGV- 233
Query: 487 FEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNAN---------------IGKN 531
+ ++ + + IV GA++TP++L SG+ A +G+N
Sbjct: 234 ---DVLDDGNVRRIHADHVIVCSGAVATPHILLNSGVGPAEQLAEQGVSVILDRHGVGQN 290
Query: 532 LHLHPVTMAWGYF--PKTSSSGEWPEEKKTSYEGGIMTAMSTTVGNFGKSGYGAVIQTPA 589
HP + +F P+ S T + T N + +
Sbjct: 291 FVDHPEVLLPYHFSTPRAIRS---------------QTPVLETALNLAELEIRPYTAS-- 333
Query: 590 LHPGMFSSLMPWVSGADIK---LRMCKFSRTAHIFVLARDQGSGTVNSPYSISYQMEAMD 646
F+ L+P V D + M SR + G+ + Y S A +
Sbjct: 334 -----FTDLVPGVPRMDHGVGVVLMAPRSRGSIELASGDPAGAPRIRYNYVASTHDRAAN 388
Query: 647 EENLKKGIEKILRILAAAGAEEIGTHHCKGKIINVKKASSEEFERFVKEESSRPLRDLST 706
E ++ E +L +A G + + E + +V+
Sbjct: 389 REGMQIA-ENLLESIAETGL--------------IDRPVVEYTDEWVESRLG-------- 425
Query: 707 PLSSAHQMGSCRMGI--DPKTSVVNQMGETWGVEGLYLADTSVFPTALGVNPMVTVQAIA 764
+S H GSC MG DP +VV+ G +GL + DTS+ PT P T +A
Sbjct: 426 --TSLHMSGSCVMGAESDP-FAVVDDRCRVIGAQGLSIVDTSILPTIPTRGPHATAVMVA 482
>sp|Q01738|CDH_PHACH Cellobiose dehydrogenase OS=Phanerochaete chrysosporium GN=CDH-1
PE=1 SV=1
Length = 773
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 117/301 (38%), Gaps = 54/301 (17%)
Query: 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCARSNLSLLEGKTMDQMYLAGGMLATD 332
D ++VG+G GG + A L++AG KVL+LE+G + G + + G+ D
Sbjct: 236 DYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPSTKQT----GGTYVAPWATSSGLTKFD 291
Query: 333 DMG-----------------VILLAGSTVGGGSTIN-----------WSASIKTPKHVAN 364
G + + AG VGGG+++N +S+S+ P N
Sbjct: 292 IPGLFESLFTDSNPFWWCKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGWPSSWTN 351
Query: 365 E--WCDEYELKLFESD-LYKEAMEVVCERMGVQSE-VEEEGFNNAVLRRGCKELGYPVNN 420
+ + +L +D + + + V S+ ++ +G+N A +N+
Sbjct: 352 HAPYTSKLSSRLPSTDHPSTDGQRYLEQSFNVVSQLLKGQGYNQAT-----------IND 400
Query: 421 IPRNSPPDHYCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRN 480
P DH G+ +G + G T+L + N V+ R+ +
Sbjct: 401 NPNYK--DHVFGYSAFDFLNGKRAGPVATYLQTALARPNFTFKTNVMVSNVV----RNGS 454
Query: 481 VATGVAFEFQYMGAKDICVVESK-VTIVACGALSTPNLLKRSGLKNANIGKNLHLHPVTM 539
GV +G V K I++ GA T +L +SG+ ++ + + +P
Sbjct: 455 QILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAA 514
Query: 540 A 540
A
Sbjct: 515 A 515
>sp|Q7MF12|BETA_VIBVY Choline dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=betA
PE=3 SV=1
Length = 560
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 119/572 (20%), Positives = 211/572 (36%), Gaps = 108/572 (18%)
Query: 273 DAVVVGSGSGGGLIAGVLAKAG-YKVLVLEKG--------------SYCARSNLSLLEGK 317
D ++VG+GS G ++A L+++G + VL+LE G SY S + +
Sbjct: 6 DYIIVGAGSAGCVLADRLSESGDHSVLLLEAGGSDKSIFIQMPTALSYPMNSEKYAWQFE 65
Query: 318 TMDQMYLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDE------YE 371
T + L G L G +GG S+IN ++ +EW ++ Y+
Sbjct: 66 TDAEADLDGRRLHCP-------RGKVLGGSSSINGMVYVRGHACDFDEWEEQGAKGWNYQ 118
Query: 372 LKLFESDLYKEAMEVVCERMGVQSEVEEEGFNNAVLR-------RGCKELGYPVNNIPRN 424
L + ++ E G + N L KE GYP + N
Sbjct: 119 ACLPYFRRAENWIDGEDEYRGGDGPLSTCAGNKMTLNPLYRAFIDAGKEAGYPETS-DYN 177
Query: 425 SPPDHYCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATG 484
G + K+G + TS +L N ++ G +L +++R
Sbjct: 178 GYQQEGFGPMHMTVKNGVRASTSNAYLSRAKKRSNFKLIKGVVVQRILLEEKR------A 231
Query: 485 VAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNANI---------------G 529
V EF+ G C +++V I + G++ + LL+ SG+ + G
Sbjct: 232 VGVEFELAGELRTCFAKNEV-ISSAGSIGSVQLLQLSGIGPKTVLEKAGVTPVYHLPGVG 290
Query: 530 KNLHLH-----------PVTM--AWGYFPKTSSSGEWPEEKKTSYEGGIMTAMSTTVGNF 576
+NL H P+T+ +F K EW +K G+ F
Sbjct: 291 QNLQDHLEVYFQYHCQKPITLNGKLDWFSKGLIGTEWILTRK-----GLGATNHFESCAF 345
Query: 577 GKSGYGAVIQTPALHPGMFSSLMPWVS-------GADIKLRMCKFSRTAHIFVLARDQGS 629
+S G ++ P + + M + G + + K + +++ +
Sbjct: 346 IRSRAG--LKWPNIQYHFLPAAMRYDGQAAFDGHGFQVHVGPNKPESRGRVEIVS----A 399
Query: 630 GTVNSP-YSISYQMEAMDEENLKKGIEKILRILAAAGAEEIGTHHCKGKIINVKKASSEE 688
++ P +Y D ++ + I ILA +E + I NV A+ E
Sbjct: 400 NPLDKPKIQFNYLSTERDRQDWRDCIRLTREILAQPAMDEFRGEEIQPGI-NV--ATDAE 456
Query: 689 FERFVKEESSRPLRDLSTPLSSAHQMGSCRMGIDPKT-SVVNQMGETWGVEGLYLADTSV 747
+++VKE S+ H SC+MG D +V+++ G+ L + D+SV
Sbjct: 457 IDQWVKENVE----------SAYHPSCSCKMGADDDPMAVLDEECRVRGITNLRVVDSSV 506
Query: 748 FPTALGVNPMVTVQAIAYCTAQSVLDVLRRKK 779
FPT P + A A+ D++ K+
Sbjct: 507 FPTI----PNGNLNAPTIMVAERAADLILHKQ 534
>sp|Q8D3K2|BETA_VIBVU Choline dehydrogenase OS=Vibrio vulnificus (strain CMCP6) GN=betA
PE=3 SV=1
Length = 560
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 117/573 (20%), Positives = 209/573 (36%), Gaps = 110/573 (19%)
Query: 273 DAVVVGSGSGGGLIAGVLAKAG-YKVLVLEKG--------------SYCARSNLSLLEGK 317
D ++VG+GS G ++A L+++G + VL+LE G SY S + +
Sbjct: 6 DYIIVGAGSAGCVLADRLSESGDHSVLLLEAGGSDKSIFIQMPTALSYPMNSEKYAWQFE 65
Query: 318 TMDQMYLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDE------YE 371
T + L G L G +GG S+IN ++ +EW ++ Y+
Sbjct: 66 TDAEADLDGRRLHCP-------RGKVLGGSSSINGMVYVRGHACDFDEWEEQGAKGWNYQ 118
Query: 372 LKLFESDLYKEAMEVVCERMGVQSEVEEEGFNNAVLR-------RGCKELGYPVNNIPRN 424
L + ++ E G + N L KE GYP + N
Sbjct: 119 ACLPYFRRAENWIDGEDEYRGGDGPLSTCAGNKMTLNPLYRAFIDAGKEAGYPETS-DYN 177
Query: 425 SPPDHYCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATG 484
G + K+G + TS +L N ++ G +L +++R
Sbjct: 178 GYQQEGFGPMHMTVKNGVRASTSNAYLSRAKKRSNFKLIKGVVVQRILLEEKR------A 231
Query: 485 VAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNANI---------------G 529
V EF+ G C +++V I + G++ + LL+ SG+ + G
Sbjct: 232 VGVEFELAGELRTCFAKNEV-ISSAGSIGSVQLLQLSGIGPKTVLEKAGVTPVHHLPGVG 290
Query: 530 KNLHLH-----------PVTM--AWGYFPKTSSSGEWPEEKKTSYEGGIMTAMSTTVGNF 576
+NL H P+T+ +F K EW +K G+ F
Sbjct: 291 QNLQDHLEVYFQYHCQKPITLNGKLDWFSKGLIGAEWILTRK-----GLGATNHFESCAF 345
Query: 577 GKSGYGAVIQTPALHPGMFSSLMPWVS-------GADIKLRMCKFSRTAHIFVLARDQGS 629
+S G ++ P + + M + G + + K + +++ +
Sbjct: 346 IRSRAG--LKWPNIQYHFLPAAMRYDGQAAFDGHGFQVHVGPNKPESRGRVEIVSANPSD 403
Query: 630 GTVNSPYSISYQMEAMDEENLKKGIEKILRILAAAGAEEIGTHHCKGKIIN--VKKASSE 687
+Y D ++ + I ILA +E +G+ I + A+
Sbjct: 404 ---KPKIQFNYLSTERDRQDWRDCIRLTREILAQPAMDEF-----RGEEIQPGINVATDA 455
Query: 688 EFERFVKEESSRPLRDLSTPLSSAHQMGSCRMGIDPKT-SVVNQMGETWGVEGLYLADTS 746
E +++VKE S+ H SC+MG D +V+++ G+ L + D+S
Sbjct: 456 EIDQWVKENVE----------SAYHPSCSCKMGADDDPMAVLDEECRVRGITNLRVVDSS 505
Query: 747 VFPTALGVNPMVTVQAIAYCTAQSVLDVLRRKK 779
VFPT P + A A+ D++ K+
Sbjct: 506 VFPTI----PNGNLNAPTIMVAERAADLILHKQ 534
>sp|P17444|BETA_ECOLI Choline dehydrogenase OS=Escherichia coli (strain K12) GN=betA PE=1
SV=1
Length = 556
Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 111/576 (19%), Positives = 209/576 (36%), Gaps = 105/576 (18%)
Query: 270 IKCDAVVVGSGSGGGLIAGVLAK-AGYKVLVLEKGSYCARSNLSL---------LEGKTM 319
++ D +++G+GS G ++A L + VL+LE G R + L+GK
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 320 DQMYLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDEYELK------ 373
+ Y ++ + G +GG S IN I+ + W E L+
Sbjct: 61 NWAYETEPEPFMNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSYLD 120
Query: 374 ------------LFESDLY--KEAMEVVCERMGVQSEVEEEGFNNAVLRRGCKELGYPVN 419
+ E+D + + V + GV E A++ G + GYP
Sbjct: 121 CLPYYRKAETRDMGENDYHGGDGPVSVTTSKPGVNPLFE------AMIEAGV-QAGYPRT 173
Query: 420 NIPRNSPPDHYCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDR 479
+ + + G + T+ +L + N I ++ +R
Sbjct: 174 DDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDGKR-- 231
Query: 480 NVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNAN------------ 527
A GV + + +K ++ GA+++P +L+RSG+ NA
Sbjct: 232 --AVGVEW-LEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHE 288
Query: 528 ---IGKNLHLHPVTMAWGYFPKTSSSG----EWPEEKKTSYE---GGIMTAMSTTVGNFG 577
+G+NL H + M Y K S +W + K E GG S +F
Sbjct: 289 LPGVGENLQDH-LEMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASN---HFE 344
Query: 578 KSGYGAVIQTPALHPGMFSSLMPWV-----------SGADIKLRMCKFSRTAHIFVLARD 626
G+ + A P + +P G + + H+ + +RD
Sbjct: 345 AGGFIRSREEFAW-PNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRD 403
Query: 627 QGSGTVNSPYSISYQMEAMDEENLKKGIEKILRILAAAGAEEIGTHHCKGKIIN--VKKA 684
+ +Y D + + I I+ ++ +G+ I+ V+
Sbjct: 404 PHQ---HPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQY-----RGREISPGVECQ 455
Query: 685 SSEEFERFVKEESSRPLRDLSTPLSSAHQMGSCRMGIDPKTSVVNQMGETWGVEGLYLAD 744
+ E+ + FV+ + ++ H G+C+MG D + SVV+ G G+EGL + D
Sbjct: 456 TDEQLDEFVRNHAE----------TAFHPCGTCKMGYD-EMSVVDGEGRVHGLEGLRVVD 504
Query: 745 TSVFPTALGVNPMVTVQAIAYCTAQSVLDVLRRKKS 780
S+ P + N + A + + D++R +++
Sbjct: 505 ASIMPQIITGN----LNATTIMIGEKIADMIRGQEA 536
>sp|B1J0W6|BETA_ECOLC Choline dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM
1576 / Crooks) GN=betA PE=3 SV=1
Length = 556
Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 111/576 (19%), Positives = 209/576 (36%), Gaps = 105/576 (18%)
Query: 270 IKCDAVVVGSGSGGGLIAGVLAK-AGYKVLVLEKGSYCARSNLSL---------LEGKTM 319
++ D +++G+GS G ++A L + VL+LE G R + L+GK
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 320 DQMYLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDEYELK------ 373
+ Y ++ + G +GG S IN I+ + W E L+
Sbjct: 61 NWAYETEPEPFMNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSYLD 120
Query: 374 ------------LFESDLY--KEAMEVVCERMGVQSEVEEEGFNNAVLRRGCKELGYPVN 419
+ E+D + + V + GV E A++ G + GYP
Sbjct: 121 CLPYYRKAETRDMGENDYHGGDGPVSVTTSKPGVNPLFE------AMIEAGV-QAGYPRT 173
Query: 420 NIPRNSPPDHYCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDR 479
+ + + G + T+ +L + N I ++ +R
Sbjct: 174 DDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDGKR-- 231
Query: 480 NVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNAN------------ 527
A GV + + +K ++ GA+++P +L+RSG+ NA
Sbjct: 232 --AVGVEW-LEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHE 288
Query: 528 ---IGKNLHLHPVTMAWGYFPKTSSSG----EWPEEKKTSYE---GGIMTAMSTTVGNFG 577
+G+NL H + M Y K S +W + K E GG S +F
Sbjct: 289 LPGVGENLQDH-LEMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASN---HFE 344
Query: 578 KSGYGAVIQTPALHPGMFSSLMPWV-----------SGADIKLRMCKFSRTAHIFVLARD 626
G+ + A P + +P G + + H+ + +RD
Sbjct: 345 AGGFIRSREEFAW-PNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRD 403
Query: 627 QGSGTVNSPYSISYQMEAMDEENLKKGIEKILRILAAAGAEEIGTHHCKGKIIN--VKKA 684
+ +Y D + + I I+ ++ +G+ I+ V+
Sbjct: 404 PHQ---HPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQY-----RGREISPGVECQ 455
Query: 685 SSEEFERFVKEESSRPLRDLSTPLSSAHQMGSCRMGIDPKTSVVNQMGETWGVEGLYLAD 744
+ E+ + FV+ + ++ H G+C+MG D + SVV+ G G+EGL + D
Sbjct: 456 TDEQLDEFVRNHAE----------TAFHPCGTCKMGYD-EMSVVDGEGRVHGLEGLRVVD 504
Query: 745 TSVFPTALGVNPMVTVQAIAYCTAQSVLDVLRRKKS 780
S+ P + N + A + + D++R +++
Sbjct: 505 ASIMPQIITGN----LNATTIMIGEKIADMIRGQEA 536
>sp|B1XE52|BETA_ECODH Choline dehydrogenase OS=Escherichia coli (strain K12 / DH10B)
GN=betA PE=3 SV=1
Length = 556
Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 111/576 (19%), Positives = 209/576 (36%), Gaps = 105/576 (18%)
Query: 270 IKCDAVVVGSGSGGGLIAGVLAK-AGYKVLVLEKGSYCARSNLSL---------LEGKTM 319
++ D +++G+GS G ++A L + VL+LE G R + L+GK
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 320 DQMYLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDEYELK------ 373
+ Y ++ + G +GG S IN I+ + W E L+
Sbjct: 61 NWAYETEPEPFMNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSYLD 120
Query: 374 ------------LFESDLY--KEAMEVVCERMGVQSEVEEEGFNNAVLRRGCKELGYPVN 419
+ E+D + + V + GV E A++ G + GYP
Sbjct: 121 CLPYYRKAETRDMGENDYHGGDGPVSVTTSKPGVNPLFE------AMIEAGV-QAGYPRT 173
Query: 420 NIPRNSPPDHYCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDR 479
+ + + G + T+ +L + N I ++ +R
Sbjct: 174 DDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDGKR-- 231
Query: 480 NVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNAN------------ 527
A GV + + +K ++ GA+++P +L+RSG+ NA
Sbjct: 232 --AVGVEW-LEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHE 288
Query: 528 ---IGKNLHLHPVTMAWGYFPKTSSSG----EWPEEKKTSYE---GGIMTAMSTTVGNFG 577
+G+NL H + M Y K S +W + K E GG S +F
Sbjct: 289 LPGVGENLQDH-LEMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASN---HFE 344
Query: 578 KSGYGAVIQTPALHPGMFSSLMPWV-----------SGADIKLRMCKFSRTAHIFVLARD 626
G+ + A P + +P G + + H+ + +RD
Sbjct: 345 AGGFIRSREEFAW-PNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRD 403
Query: 627 QGSGTVNSPYSISYQMEAMDEENLKKGIEKILRILAAAGAEEIGTHHCKGKIIN--VKKA 684
+ +Y D + + I I+ ++ +G+ I+ V+
Sbjct: 404 PHQ---HPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQY-----RGREISPGVECQ 455
Query: 685 SSEEFERFVKEESSRPLRDLSTPLSSAHQMGSCRMGIDPKTSVVNQMGETWGVEGLYLAD 744
+ E+ + FV+ + ++ H G+C+MG D + SVV+ G G+EGL + D
Sbjct: 456 TDEQLDEFVRNHAE----------TAFHPCGTCKMGYD-EMSVVDGEGRVHGLEGLRVVD 504
Query: 745 TSVFPTALGVNPMVTVQAIAYCTAQSVLDVLRRKKS 780
S+ P + N + A + + D++R +++
Sbjct: 505 ASIMPQIITGN----LNATTIMIGEKIADMIRGQEA 536
>sp|Q0T7N0|BETA_SHIF8 Choline dehydrogenase OS=Shigella flexneri serotype 5b (strain
8401) GN=betA PE=3 SV=1
Length = 556
Score = 42.7 bits (99), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 122/314 (38%), Gaps = 63/314 (20%)
Query: 502 SKVTIVACGALSTPNLLKRSGLKNAN---------------IGKNLHLHPVTMAWGYFPK 546
+K ++ GA+++P +L+RSG+ NA +G+NL H + M Y K
Sbjct: 251 NKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDH-LEMYLQYECK 309
Query: 547 TSSSG----EWPEEKKTSYE---GGIMTAMSTTVGNFGKSGYGAVIQTPALHPGMFSSLM 599
S +W + K E GG S +F G+ + A P + +
Sbjct: 310 EPVSLYPALQWWNQPKIGAEWLFGGTGVGASN---HFEAGGFIRSREEFAW-PNIQYHFL 365
Query: 600 PWV-----------SGADIKLRMCKFSRTAHIFVLARDQGSGTVNSPYSISYQMEAMDEE 648
P G + + H+ + +RD + +Y D +
Sbjct: 366 PVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQ---HPAILFNYMSHEQDWQ 422
Query: 649 NLKKGIEKILRILAAAGAEEIGTHHCKGKIIN--VKKASSEEFERFVKEESSRPLRDLST 706
+ I I+ ++ +G+ I+ V+ + E+ + FV+ +
Sbjct: 423 EFRDAIRITREIMHQPALDQY-----RGREISPGVECQTDEQLDEFVRNHAE-------- 469
Query: 707 PLSSAHQMGSCRMGIDPKTSVVNQMGETWGVEGLYLADTSVFPTALGVNPMVTVQAIAYC 766
++ H G+C+MG D + SVV+ G G+EGL + D S+ P + N + A
Sbjct: 470 --TAFHPCGTCKMGYD-EMSVVDGEGRVHGLEGLRVVDASIMPQIITGN----LNATTIM 522
Query: 767 TAQSVLDVLRRKKS 780
+ + D++R +++
Sbjct: 523 IGEKIADMIRGQEA 536
>sp|Q75ZP8|P2OX_LYOSH Pyranose 2-oxidase OS=Lyophyllum shimeji GN=p2ox PE=2 SV=1
Length = 618
Score = 42.4 bits (98), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 712 HQMGSCRMGIDPKTSVVNQMGETWGVEGLYLADTSVFPTALGVNPMVTVQAIAYCTAQSV 771
H G+ R+G D T+V + W LY+A T G NP +T A +A+S+
Sbjct: 540 HLAGTTRIGFDKATTVADNNSLVWDFANLYVAGNGTIRTGFGENPTLTSMCHAIKSARSI 599
Query: 772 LDVLR 776
++ L+
Sbjct: 600 INTLK 604
>sp|Q8VHE9|RETST_RAT All-trans-retinol 13,14-reductase OS=Rattus norvegicus GN=Retsat
PE=2 SV=1
Length = 609
Score = 42.4 bits (98), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 225 LYKGLINMQLPRNIVADSLRQVGFPVSVRNKRNAAPSSIASPSLVI-KCDAVVVGSGSGG 283
+Y GL P D R V+ + R S S V K DAVV+GSG GG
Sbjct: 19 VYVGLFTGSSPNPFAEDVKRPPEPLVTDKEARKKVLKQAFSVSRVPEKLDAVVIGSGIGG 78
Query: 284 GLIAGVLAKAGYKVLVLEK 302
A VLAKAG +VLVLE+
Sbjct: 79 LASAAVLAKAGKRVLVLEQ 97
>sp|P48537|CRTI_CERNC Phytoene desaturase OS=Cercospora nicotianae GN=PDH1 PE=3 SV=1
Length = 621
Score = 42.4 bits (98), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 266 PSLVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYC-ARSNLSLLEGKTMDQ 321
PS + A+V+GSG GG A LA+AG+ V VLEK ++ R +L EG DQ
Sbjct: 2 PSTSKRPTAIVIGSGVGGVSTAARLARAGFHVTVLEKNNFTGGRCSLIHHEGYRFDQ 58
>sp|B1LIJ7|BETA_ECOSM Choline dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC)
GN=betA PE=3 SV=1
Length = 562
Score = 42.4 bits (98), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 120/312 (38%), Gaps = 59/312 (18%)
Query: 502 SKVTIVACGALSTPNLLKRSGLKNAN---------------IGKNLHLHPVTMAWGYFPK 546
+K ++ GA+++P +L+RSG+ NA +G+NL H + M Y K
Sbjct: 251 NKEVLLCAGAIASPQILQRSGVGNAGLLAEFDIPLVHELPGVGENLQDH-LEMYLQYECK 309
Query: 547 TSSSG----EWPEEKKTSYE-----GGIMTAMSTTVGNFGKSGYGAVIQTPALHPGMFSS 597
S +W + K E GI + G F +S + P +
Sbjct: 310 EPVSLYPALQWWNQPKIGAEWLFGGTGIGASNHFEAGGFIRS------REEFAWPNIQYH 363
Query: 598 LMPWVSGADIKLRMCKFSRTAHIFVLARDQGSGTVN----SPYS-----ISYQMEAMDEE 648
+P + + + H+ + R G V +P+ +Y D +
Sbjct: 364 FLPVAINYNGSNAVKEHGFQCHVGSM-RSPSRGHVRIKSRAPHQHPAILFNYMSHEQDWQ 422
Query: 649 NLKKGIEKILRILAAAGAEEIGTHHCKGKIINVKKASSEEFERFVKEESSRPLRDLSTPL 708
+ I I+ ++ +H + V+ + E+ + FV+ +
Sbjct: 423 EFRDAIRITREIMHQPALDQ---YHGREISPGVECQTDEQLDEFVRNHAE---------- 469
Query: 709 SSAHQMGSCRMGIDPKTSVVNQMGETWGVEGLYLADTSVFPTALGVNPMVTVQAIAYCTA 768
++ H G+C+MG D + SVV+ G G+EGL + D S+ P + N + A
Sbjct: 470 TAFHPCGTCKMGYD-EMSVVDGEGRVHGLEGLRVVDASIMPQIITGN----LNATTIMIG 524
Query: 769 QSVLDVLRRKKS 780
+ + D++R K +
Sbjct: 525 EKMADMIRGKDA 536
>sp|B0CKN4|BETA_BRUSI Choline dehydrogenase OS=Brucella suis (strain ATCC 23445 / NCTC
10510) GN=betA PE=3 SV=1
Length = 549
Score = 42.4 bits (98), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 108/543 (19%), Positives = 191/543 (35%), Gaps = 103/543 (18%)
Query: 270 IKCDAVVVGSGSGGGLIAGVLAKAG-YKVLVLEKGSYCARSNLSL-------LEGKTMDQ 321
++ D V++GSGS G +A L++ G Y V+V+E G + + + +T D
Sbjct: 1 MEADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDW 60
Query: 322 MYLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDE------------ 369
+ + ++ G +GG S+IN ++ + W
Sbjct: 61 GFSSEPEPHIGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYADVLP 120
Query: 370 YELKLFESDLYKEAMEVVCERMGVQSEVEEEGFNNAVLRRGCKELGYPVNNIPRNSPPDH 429
Y ++ S +E + VQ + +A + G + G+ V + N
Sbjct: 121 YFKRMENSQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAG-HQAGFEVTD-DYNGEKQE 178
Query: 430 YCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEF 489
G +G + + +L + N ++ G VL KR A GV E
Sbjct: 179 GFGPMEQTIHNGRRWSAANAYLKPALKRPNVKLVKGFARKIVLEGKR-----AVGVEIE- 232
Query: 490 QYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNA---------------NIGKNLHL 534
G + + I+A ++++P LL SG+ A +G+NL
Sbjct: 233 --AGRTFSTIRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQD 290
Query: 535 H-----------PVTM--AWGYFPKTSSSGEWPEEKKTSYEGGIMTAMSTTVGNFGKSGY 581
H P+T+ F K EW ++ N +S
Sbjct: 291 HLEVYIQQECTQPITLYSKLNLFSKARIGVEW-----------LLFKTGDGATNHFESAA 339
Query: 582 GAVIQTPALHPGMFSSLMPWVSGADIKLRMCKFSRTAHIFVL-ARDQGSGTVNSP----- 635
+ +P + +P D K AH+ + ++ +GS T+ S
Sbjct: 340 FVRSKAGVEYPDIQYHFLPVAIRYDGKAAAQSHGFQAHVGPMRSKSRGSVTLRSANPREK 399
Query: 636 --YSISYQMEAMDEENLKKGIEKILRILAAA------GAEEIGTHHCKGKIINVKKASSE 687
+Y D + + + I A GAE H + + +
Sbjct: 400 PVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPYRGAEIQPGAHVQ---------TDD 450
Query: 688 EFERFVKEESSRPLRDLSTPLSSAHQMGSCRMG-IDPKTSVVNQMGETWGVEGLYLADTS 746
E + F++E S+ H G+C+MG +D +VV+ GVEGL +AD+S
Sbjct: 451 EIDNFIREHVE----------SAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGLRVADSS 500
Query: 747 VFP 749
+FP
Sbjct: 501 IFP 503
>sp|A5VPA6|BETA_BRUO2 Choline dehydrogenase OS=Brucella ovis (strain ATCC 25840 / 63/290
/ NCTC 10512) GN=betA PE=3 SV=1
Length = 549
Score = 42.4 bits (98), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 108/543 (19%), Positives = 191/543 (35%), Gaps = 103/543 (18%)
Query: 270 IKCDAVVVGSGSGGGLIAGVLAKAG-YKVLVLEKGSYCARSNLSL-------LEGKTMDQ 321
++ D V++GSGS G +A L++ G Y V+V+E G + + + +T D
Sbjct: 1 MEADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDW 60
Query: 322 MYLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDE------------ 369
+ + ++ G +GG S+IN ++ + W
Sbjct: 61 GFSSEPEPHIGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYADVLP 120
Query: 370 YELKLFESDLYKEAMEVVCERMGVQSEVEEEGFNNAVLRRGCKELGYPVNNIPRNSPPDH 429
Y ++ S +E + VQ + +A + G + G+ V + N
Sbjct: 121 YFKRMENSQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAG-HQAGFEVTD-DYNGEKQE 178
Query: 430 YCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEF 489
G +G + + +L + N ++ G VL KR A GV E
Sbjct: 179 GFGPMEQTIHNGRRWSAANAYLKPALKRPNVKLVKGFARKIVLEGKR-----AVGVEIE- 232
Query: 490 QYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNA---------------NIGKNLHL 534
G + + I+A ++++P LL SG+ A +G+NL
Sbjct: 233 --AGRTFSTIRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQD 290
Query: 535 H-----------PVTM--AWGYFPKTSSSGEWPEEKKTSYEGGIMTAMSTTVGNFGKSGY 581
H P+T+ F K EW ++ N +S
Sbjct: 291 HLEVYIQQECTQPITLYSKLNLFSKARIGVEW-----------LLFKTGDGATNHFESAA 339
Query: 582 GAVIQTPALHPGMFSSLMPWVSGADIKLRMCKFSRTAHIFVL-ARDQGSGTVNSP----- 635
+ +P + +P D K AH+ + ++ +GS T+ S
Sbjct: 340 FVRSKAGVEYPDIQYHFLPVAIRYDGKAAAQSHGFQAHVGPMRSKSRGSVTLRSANPREK 399
Query: 636 --YSISYQMEAMDEENLKKGIEKILRILAAA------GAEEIGTHHCKGKIINVKKASSE 687
+Y D + + + I A GAE H + + +
Sbjct: 400 PVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPYRGAEIQPGAHVQ---------TDD 450
Query: 688 EFERFVKEESSRPLRDLSTPLSSAHQMGSCRMG-IDPKTSVVNQMGETWGVEGLYLADTS 746
E + F++E S+ H G+C+MG +D +VV+ GVEGL +AD+S
Sbjct: 451 EIDNFIREHVE----------SAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGLRVADSS 500
Query: 747 VFP 749
+FP
Sbjct: 501 IFP 503
>sp|Q58845|Y1450_METJA Uncharacterized protein MJ1450 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1450 PE=4 SV=1
Length = 371
Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 104/508 (20%), Positives = 185/508 (36%), Gaps = 147/508 (28%)
Query: 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCARSNLSLLEGKTMDQMYLAGGMLATD 332
D ++GSG G +A L + YKV V+EKG + ++ EGK ++ Y+ G
Sbjct: 3 DFAIIGSGVAGATLAKEL-RYRYKVAVIEKGKKPSYAS----EGKNVEINYVYG------ 51
Query: 333 DMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDEYELKLF--ESDLYKEAMEVVCER 390
+GG + +IKT E+K + + D+YKE + E
Sbjct: 52 -----------LGGSGVYSLGNAIKT------------EIKGYKIDKDIYKE----IWEE 84
Query: 391 MGVQSEVEEEGFNNAVLRRGCKELGYPVNNIPRNSPPDHYCGWCCLG-CKDGSKKGTSET 449
+ +++ ++ F N + + ELG+ + + CG C CK K T
Sbjct: 85 LKIKAP--KDDFLNDI-DKAFIELGFEKMEKFIDFDRCNKCGECARKICK---AKWTPLN 138
Query: 450 WL----VDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVT 505
+L +++ N + E+L K R +++K
Sbjct: 139 YLKESNANIITEFNIKAINYSNYYEILDDKGRK---------------------IKAKNL 177
Query: 506 IVACGALSTPNLLKRSGLKNANIGKNLHLHPVTMAWGYFPKTSSSGEWPEEKKTSYEGGI 565
I++ G +++P +LK+ + + NIGKNL + G + + + Y+ +
Sbjct: 178 IISAGGINSPRILKKM-IDDENIGKNLFIDTFVTVGGILEDSYLNKDISMLVYKKYKNFM 236
Query: 566 M-TAMSTTVGNFGKSGYGAVIQTPALHPGMFSSLMPWVSGADIKLRMCKFSRTAHIFVLA 624
+ T S + N K Y V K I +
Sbjct: 237 LATHYSKLLINEIKKDYKDV----------------------------KEKDIVGIMIKI 268
Query: 625 RDQGSGTVNSPYSISYQMEAMDEENLKKGIEKILRILAAAGAEEIGTHHCKGKIINVKKA 684
+D+ +G V + ++ D + L +GI K + L G ++I T +G
Sbjct: 269 KDENNGVVLDN-DVKKEITKEDFKTLARGICKATKYLYKLGVDDIYTTIPRG-------- 319
Query: 685 SSEEFERFVKEESSRPLRDLSTPLSSAHQMGSCRMGIDPKTSVVNQMGETWGVEGLYLAD 744
+H GS + +D E EGLY+ D
Sbjct: 320 --------------------------SHPGGSLSLVVD----------EFEVREGLYVCD 343
Query: 745 TSVFPTALGVNPMVTVQAIAYCTAQSVL 772
S+F ALGV P+V++ A++ + +L
Sbjct: 344 ASLFKEALGVPPIVSIIALSKKFVREIL 371
>sp|Q9AJD6|PNO_MICLT Pyridoxine 4-oxidase OS=Microbacterium luteolum GN=pno PE=1 SV=3
Length = 507
Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 136/366 (37%), Gaps = 66/366 (18%)
Query: 427 PDHYCGWCC------LGCKDGSKKGTSETWLV-DLVNSGNSAILPGCEAIEVLHKKRRDR 479
PDH G L +DG + +E WL ++ N I+ G + + + ++
Sbjct: 172 PDHNTGQMIGVTPNSLMIRDGRRVTVAEAWLTPEVCARPNLTIMTGT----LTRRLKLEK 227
Query: 480 NVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNANI----------- 528
+ + + + G + + V + I++ G+L +P LL RSG+ N+
Sbjct: 228 SHVSAI----ELAGPEGLATVTASEIILSAGSLESPALLMRSGIGRENVLREAGVTCRVK 283
Query: 529 ----GKNLHLHPVTMAWGYFPKTSSSGEWPEEKKTSYEGGIMTAMSTTVGNFGKSGYGAV 584
G NL H + Y K P + S M A G+F G +
Sbjct: 284 APELGLNLMDHLLGAGNLYATKKHLP---PSRLQHSESMAYMRA-----GDFSAGGQPEI 335
Query: 585 IQTPALHPGMFSSLMPWVSGADIKLRMCKFSRTAHIFVLARDQGSGTVNSPYSISYQMEA 644
+ + P + S G + + +F + G +
Sbjct: 336 VVGCGVAPIVSESFTAPAPG----------NAYSFLFGVTHPTSRGEIRITGDAPDSPLI 385
Query: 645 MDEENLKKGIEKILRILAAAGAEEIGTHHCK------GKIINVKKASSEEFERFVKEESS 698
+D L+ ++ L A A EIG H + +I+ A+S++ + F+ +
Sbjct: 386 IDPRYLQTQNDRNLFRAALGAAREIG-HRPELAEWRDHEILPKSLAASQDIDTFIAKAV- 443
Query: 699 RPLRDLSTPLSSAHQMGSCRMGIDPKTSVVNQMGETWGVEGLYLADTSVFPTALGVNPMV 758
++ H G+CRMG D + SVV+ G++ LY+ D SV P+
Sbjct: 444 ---------ITHHHPSGTCRMGKD-EMSVVDADLRLRGLDNLYVVDGSVLPSLTAGPIHA 493
Query: 759 TVQAIA 764
VQAIA
Sbjct: 494 AVQAIA 499
>sp|Q8YFY2|BETA_BRUME Choline dehydrogenase OS=Brucella melitensis biotype 1 (strain 16M
/ ATCC 23456 / NCTC 10094) GN=betA PE=3 SV=2
Length = 549
Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 108/543 (19%), Positives = 191/543 (35%), Gaps = 103/543 (18%)
Query: 270 IKCDAVVVGSGSGGGLIAGVLAKAG-YKVLVLEKGSYCARSNLSL-------LEGKTMDQ 321
++ D V++GSGS G +A L++ G Y V+V+E G + + + +T D
Sbjct: 1 MEADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDW 60
Query: 322 MYLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDE------------ 369
+ + ++ G +GG S+IN ++ + W
Sbjct: 61 GFSSEPEPHIRGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYADVLP 120
Query: 370 YELKLFESDLYKEAMEVVCERMGVQSEVEEEGFNNAVLRRGCKELGYPVNNIPRNSPPDH 429
Y ++ S +E + VQ + +A + G + G+ V + N
Sbjct: 121 YFKRMENSQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAG-HQAGFEVTD-DYNGEKQE 178
Query: 430 YCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEF 489
G +G + + +L + N ++ G VL KR A GV E
Sbjct: 179 GFGPMEQTIHNGRRWSAANAYLKPALKRPNVKLVKGFARKIVLEGKR-----AVGVEIE- 232
Query: 490 QYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNA---------------NIGKNLHL 534
G + + I+A ++++P LL SG+ A +G+NL
Sbjct: 233 --AGRTFSTIRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQD 290
Query: 535 H-----------PVTM--AWGYFPKTSSSGEWPEEKKTSYEGGIMTAMSTTVGNFGKSGY 581
H P+T+ F K EW ++ N +S
Sbjct: 291 HLEVYIQQECTQPITLYSKLNLFSKARIGVEW-----------LLFKTGDGATNHFESAA 339
Query: 582 GAVIQTPALHPGMFSSLMPWVSGADIKLRMCKFSRTAHIFVL-ARDQGSGTVNSP----- 635
+ +P + +P D K AH+ + ++ +GS T+ S
Sbjct: 340 FVRSKAGVEYPDIQYHFLPVAIRYDGKAAAQSHGFQAHVGPMRSKSRGSVTLRSANPREK 399
Query: 636 --YSISYQMEAMDEENLKKGIEKILRILAAA------GAEEIGTHHCKGKIINVKKASSE 687
+Y D + + + I A GAE H + + +
Sbjct: 400 PVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPYRGAEIQPGAHVQ---------TDD 450
Query: 688 EFERFVKEESSRPLRDLSTPLSSAHQMGSCRMG-IDPKTSVVNQMGETWGVEGLYLADTS 746
E + F++E S+ H G+C+MG +D +VV+ GVEGL +AD+S
Sbjct: 451 EIDNFIREHVE----------SAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGLRVADSS 500
Query: 747 VFP 749
+FP
Sbjct: 501 IFP 503
>sp|P54223|BETA_RHIME Choline dehydrogenase OS=Rhizobium meliloti (strain 1021) GN=betA
PE=3 SV=2
Length = 549
Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 109/544 (20%), Positives = 201/544 (36%), Gaps = 105/544 (19%)
Query: 270 IKCDAVVVGSGSGGGLIAGVLAKAGYK-VLVLEKGSYCARSNLSL-------LEGKTMDQ 321
++ D V++GSGS G +A L++ G V+VLE G + + + +
Sbjct: 1 MQADFVIIGSGSAGSALAYRLSEDGRNSVIVLEFGGSDVGPFIQMPAALAWPMSMNRYNW 60
Query: 322 MYLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCD------------E 369
YL+ ++ + G +GG S+IN ++ N W +
Sbjct: 61 GYLSEPEPNLNNRRITAPRGKVIGGSSSINGMVYVRGHSEDFNRWEELGAQGWAYADVLP 120
Query: 370 YELKLFESDLYKEAMEVVCERMGVQSEVEEEGFNNAVLRRGCKELGYPVNNIPRNSPPDH 429
Y ++ S +E + VQ + +A + G KE G+ V S +
Sbjct: 121 YYKRMEHSHGGEEGWRGTDGPLHVQRGPVKNPLFHAFIEAG-KEAGFEVTEDYNGSKQEG 179
Query: 430 YCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEF 489
+ G G + + +L + N ++ C A +++ + R ATGV E
Sbjct: 180 F-GLMEQTTWRGRRWSAASAYLRPALKRPNVELI-RCFARKIVIENGR----ATGVEIE- 232
Query: 490 QYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNA---------------NIGKNLHL 534
G + V ++ IV+ + ++P LL SG+ A +G+NL
Sbjct: 233 --RGGRIEVVKANREVIVSASSFNSPKLLMLSGIGPAAHLKEMGIDVKVDRPGVGQNLQD 290
Query: 535 H-----------PVTM-AW-GYFPKTSSSGEWPEEKKTSYEGGIMTAMSTTVGNFGKSGY 581
H PV++ +W +F + + +W ++ G+ + F +S
Sbjct: 291 HMEFYFQQVSTKPVSLYSWLPWFWQGVAGAQW-----LFFKRGLGISNQFESCAFLRSAP 345
Query: 582 GAVIQTPALHPGMFSSLMPWVSGADIKLRMCKFSRTAHI-FVLARDQGSGTVNSP----- 635
G P + +P D K H+ + L++ +G+ ++ S
Sbjct: 346 GVK------QPDIQYHFLPVAISYDGKAAAKSHGFQVHVGYNLSKSRGNVSLRSSDPKAD 399
Query: 636 --YSISYQMEAMDEENLKKGIEKILRILAAAGAEEIGTHHCKGKIINVKKASSEEFERFV 693
+Y D E + + I G + + K + EE + F+
Sbjct: 400 PVIRFNYMSHPEDWEKFRHCVRLTREIF---GQKAFDLYRGPEIQPGEKVQTDEEIDGFL 456
Query: 694 KEESSRPLRDLSTPLSSAHQMGSCRMG--------IDPKTSVVNQMGETWGVEGLYLADT 745
+E S+ H G+C+MG +DP+T V+ GV+GL +AD+
Sbjct: 457 REHLE----------SAYHPCGTCKMGAKDDPMAVVDPETRVI-------GVDGLRVADS 499
Query: 746 SVFP 749
S+FP
Sbjct: 500 SIFP 503
>sp|Q64FW2|RETST_MOUSE All-trans-retinol 13,14-reductase OS=Mus musculus GN=Retsat PE=1
SV=3
Length = 609
Score = 42.0 bits (97), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 25/32 (78%)
Query: 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEK 302
K DAVV+GSG GG A VLAKAG +VLVLE+
Sbjct: 66 KLDAVVIGSGIGGLASAAVLAKAGKRVLVLEQ 97
>sp|Q8G1Z8|BETA_BRUSU Choline dehydrogenase OS=Brucella suis biovar 1 (strain 1330)
GN=betA PE=3 SV=1
Length = 549
Score = 42.0 bits (97), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 108/543 (19%), Positives = 191/543 (35%), Gaps = 103/543 (18%)
Query: 270 IKCDAVVVGSGSGGGLIAGVLAKAG-YKVLVLEKGSYCARSNLSL-------LEGKTMDQ 321
++ D V++GSGS G +A L++ G Y V+V+E G + + + +T D
Sbjct: 1 MEADFVIIGSGSAGSAMAYRLSENGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDW 60
Query: 322 MYLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDE------------ 369
+ + ++ G +GG S+IN ++ + W
Sbjct: 61 GFSSEPEPHIGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYADVLP 120
Query: 370 YELKLFESDLYKEAMEVVCERMGVQSEVEEEGFNNAVLRRGCKELGYPVNNIPRNSPPDH 429
Y ++ S +E + VQ + +A + G + G+ V + N
Sbjct: 121 YFKRMENSQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAG-HQAGFEVTD-DYNGEKQE 178
Query: 430 YCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEF 489
G +G + + +L + N ++ G VL KR A GV E
Sbjct: 179 GFGPMEQTIHNGRRWSAANAYLKPALKRPNVKLVKGFARKIVLEGKR-----AVGVEIE- 232
Query: 490 QYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNA---------------NIGKNLHL 534
G + + I+A ++++P LL SG+ A +G+NL
Sbjct: 233 --AGRTFSTIRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQNLQD 290
Query: 535 H-----------PVTM--AWGYFPKTSSSGEWPEEKKTSYEGGIMTAMSTTVGNFGKSGY 581
H P+T+ F K EW ++ N +S
Sbjct: 291 HLEVYIQQECTQPITLYSELNLFSKARIGVEW-----------LLFKTGDGATNHFESAA 339
Query: 582 GAVIQTPALHPGMFSSLMPWVSGADIKLRMCKFSRTAHIFVL-ARDQGSGTVNSP----- 635
+ +P + +P D K AH+ + ++ +GS T+ S
Sbjct: 340 FVRSKAGVEYPDIQYHFLPVAIRYDGKAAAQSHGFQAHVGPMRSKSRGSVTLRSANPREK 399
Query: 636 --YSISYQMEAMDEENLKKGIEKILRILAAA------GAEEIGTHHCKGKIINVKKASSE 687
+Y D + + + I A GAE H + + +
Sbjct: 400 PVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPYRGAEIQPGAHVQ---------TDD 450
Query: 688 EFERFVKEESSRPLRDLSTPLSSAHQMGSCRMG-IDPKTSVVNQMGETWGVEGLYLADTS 746
E + F++E S+ H G+C+MG +D +VV+ GVEGL +AD+S
Sbjct: 451 EIDNFIREHVE----------SAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGLRVADSS 500
Query: 747 VFP 749
+FP
Sbjct: 501 IFP 503
>sp|B5Z1R0|BETA_ECO5E Choline dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 /
EHEC) GN=betA PE=3 SV=1
Length = 562
Score = 41.6 bits (96), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 121/314 (38%), Gaps = 63/314 (20%)
Query: 502 SKVTIVACGALSTPNLLKRSGLKNAN---------------IGKNLHLHPVTMAWGYFPK 546
+K ++ GA+++P +L+RSG+ NA +G+NL H + M Y K
Sbjct: 251 NKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHDLPGVGENLQDH-LEMYLQYECK 309
Query: 547 TSSSG----EWPEEKKTSYE---GGIMTAMSTTVGNFGKSGYGAVIQTPALHPGMFSSLM 599
S +W + K E GG S +F G+ + A P + +
Sbjct: 310 EPVSLYPALQWWNQPKIGAEWLFGGTGVGASN---HFEAGGFIRSREEFAW-PNIQYHFL 365
Query: 600 PWV-----------SGADIKLRMCKFSRTAHIFVLARDQGSGTVNSPYSISYQMEAMDEE 648
P G + + H+ + +RD + +Y D +
Sbjct: 366 PVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQ---HPAILFNYMSHEQDWQ 422
Query: 649 NLKKGIEKILRILAAAGAEEIGTHHCKGKIIN--VKKASSEEFERFVKEESSRPLRDLST 706
+ I I+ ++ +G+ I+ + + E+ + FV+ +
Sbjct: 423 EFRDAIRITREIMHQPALDQY-----RGREISPGTECQTDEQLDEFVRNHAE-------- 469
Query: 707 PLSSAHQMGSCRMGIDPKTSVVNQMGETWGVEGLYLADTSVFPTALGVNPMVTVQAIAYC 766
++ H G+C+MG D + SVV+ G G+EGL + D S+ P + N + A
Sbjct: 470 --TAFHPCGTCKMGYD-EMSVVDGEGRVHGLEGLRVVDASIMPQIITGN----LNATTIM 522
Query: 767 TAQSVLDVLRRKKS 780
+ + D++R K++
Sbjct: 523 IGEKMADMIRGKEA 536
>sp|Q8X6C6|BETA_ECO57 Choline dehydrogenase OS=Escherichia coli O157:H7 GN=betA PE=3 SV=1
Length = 562
Score = 41.6 bits (96), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 121/314 (38%), Gaps = 63/314 (20%)
Query: 502 SKVTIVACGALSTPNLLKRSGLKNAN---------------IGKNLHLHPVTMAWGYFPK 546
+K ++ GA+++P +L+RSG+ NA +G+NL H + M Y K
Sbjct: 251 NKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHDLPGVGENLQDH-LEMYLQYECK 309
Query: 547 TSSSG----EWPEEKKTSYE---GGIMTAMSTTVGNFGKSGYGAVIQTPALHPGMFSSLM 599
S +W + K E GG S +F G+ + A P + +
Sbjct: 310 EPVSLYPALQWWNQPKIGAEWLFGGTGVGASN---HFEAGGFIRSREEFAW-PNIQYHFL 365
Query: 600 PWV-----------SGADIKLRMCKFSRTAHIFVLARDQGSGTVNSPYSISYQMEAMDEE 648
P G + + H+ + +RD + +Y D +
Sbjct: 366 PVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQ---HPAILFNYMSHEQDWQ 422
Query: 649 NLKKGIEKILRILAAAGAEEIGTHHCKGKIIN--VKKASSEEFERFVKEESSRPLRDLST 706
+ I I+ ++ +G+ I+ + + E+ + FV+ +
Sbjct: 423 EFRDAIRITREIMHQPALDQY-----RGREISPGTECQTDEQLDEFVRNHAE-------- 469
Query: 707 PLSSAHQMGSCRMGIDPKTSVVNQMGETWGVEGLYLADTSVFPTALGVNPMVTVQAIAYC 766
++ H G+C+MG D + SVV+ G G+EGL + D S+ P + N + A
Sbjct: 470 --TAFHPCGTCKMGYD-EMSVVDGEGRVHGLEGLRVVDASIMPQIITGN----LNATTIM 522
Query: 767 TAQSVLDVLRRKKS 780
+ + D++R K++
Sbjct: 523 IGEKMADMIRGKEA 536
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 294,242,272
Number of Sequences: 539616
Number of extensions: 12832727
Number of successful extensions: 46718
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 46378
Number of HSP's gapped (non-prelim): 327
length of query: 781
length of database: 191,569,459
effective HSP length: 126
effective length of query: 655
effective length of database: 123,577,843
effective search space: 80943487165
effective search space used: 80943487165
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)