Query 003990
Match_columns 781
No_of_seqs 479 out of 1977
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 10:38:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003990.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003990hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fim_B ARYL-alcohol oxidase; A 100.0 8E-65 2.8E-69 587.8 30.2 482 271-771 2-562 (566)
2 3t37_A Probable dehydrogenase; 100.0 2.9E-63 1E-67 575.0 37.9 459 269-772 15-521 (526)
3 3qvp_A Glucose oxidase; oxidor 100.0 6.8E-63 2.3E-67 572.4 32.1 476 269-776 17-580 (583)
4 1gpe_A Protein (glucose oxidas 100.0 7.8E-62 2.7E-66 567.9 31.7 475 270-776 23-584 (587)
5 2jbv_A Choline oxidase; alcoho 100.0 4.8E-61 1.6E-65 557.3 35.0 462 270-775 12-530 (546)
6 3q9t_A Choline dehydrogenase a 100.0 6.2E-61 2.1E-65 556.5 29.6 474 270-773 5-571 (577)
7 1coy_A Cholesterol oxidase; ox 100.0 2.1E-55 7.2E-60 506.0 36.6 434 268-773 8-503 (507)
8 1n4w_A CHOD, cholesterol oxida 100.0 6E-55 2E-59 502.0 35.8 436 270-776 4-501 (504)
9 1ju2_A HydroxynitrIle lyase; f 100.0 1.1E-53 3.8E-58 494.4 31.8 448 268-773 23-515 (536)
10 1kdg_A CDH, cellobiose dehydro 100.0 1.3E-53 4.3E-58 496.3 27.8 466 269-774 5-542 (546)
11 3pl8_A Pyranose 2-oxidase; sub 100.0 1.1E-41 3.6E-46 400.0 25.9 299 443-777 252-615 (623)
12 4at0_A 3-ketosteroid-delta4-5a 99.5 1E-13 3.4E-18 159.3 18.8 66 447-521 205-273 (510)
13 1qo8_A Flavocytochrome C3 fuma 99.4 1.9E-12 6.4E-17 150.6 14.9 63 449-519 255-319 (566)
14 1y0p_A Fumarate reductase flav 99.4 4.5E-12 1.5E-16 147.6 16.6 63 449-519 260-324 (571)
15 3dme_A Conserved exported prot 99.3 3.2E-12 1.1E-16 139.3 11.7 67 447-524 153-220 (369)
16 2bs2_A Quinol-fumarate reducta 99.3 7.6E-11 2.6E-15 138.7 18.4 59 448-513 162-220 (660)
17 2h88_A Succinate dehydrogenase 99.2 7.4E-11 2.5E-15 137.8 17.6 58 449-513 160-217 (621)
18 3da1_A Glycerol-3-phosphate de 99.2 2.6E-11 8.9E-16 140.6 13.7 71 446-524 172-242 (561)
19 1d4d_A Flavocytochrome C fumar 99.2 3.7E-11 1.3E-15 139.7 14.8 65 449-521 260-326 (572)
20 1y56_B Sarcosine oxidase; dehy 99.2 1E-10 3.6E-15 128.5 17.6 62 449-524 154-215 (382)
21 2gag_B Heterotetrameric sarcos 99.2 1.3E-10 4.3E-15 128.7 18.0 64 449-526 179-242 (405)
22 2wdq_A Succinate dehydrogenase 99.2 1.3E-10 4.3E-15 135.5 17.6 59 449-514 148-207 (588)
23 2oln_A NIKD protein; flavoprot 99.2 7.7E-11 2.6E-15 130.4 13.8 36 270-305 3-38 (397)
24 1chu_A Protein (L-aspartate ox 99.2 7E-11 2.4E-15 136.3 13.5 65 447-513 141-208 (540)
25 3gyx_A Adenylylsulfate reducta 99.2 1.9E-10 6.7E-15 135.2 15.7 61 450-513 172-233 (662)
26 3nyc_A D-arginine dehydrogenas 99.1 7.6E-11 2.6E-15 129.2 10.5 63 447-524 157-219 (381)
27 1kf6_A Fumarate reductase flav 99.1 2.5E-10 8.5E-15 133.3 15.2 61 448-514 138-198 (602)
28 3dje_A Fructosyl amine: oxygen 99.1 2.1E-11 7.1E-16 136.9 5.6 59 447-518 164-225 (438)
29 1ryi_A Glycine oxidase; flavop 99.1 3.8E-10 1.3E-14 123.9 15.0 39 266-304 12-50 (382)
30 2i0z_A NAD(FAD)-utilizing dehy 99.1 4.1E-10 1.4E-14 127.0 14.6 178 269-524 24-211 (447)
31 2rgh_A Alpha-glycerophosphate 99.1 7E-10 2.4E-14 128.9 16.7 71 446-524 190-260 (571)
32 1jnr_A Adenylylsulfate reducta 99.1 1.9E-09 6.6E-14 126.9 19.3 58 454-514 161-219 (643)
33 1pj5_A N,N-dimethylglycine oxi 99.1 3.3E-10 1.1E-14 137.6 12.3 66 447-526 154-219 (830)
34 2gf3_A MSOX, monomeric sarcosi 99.1 7.6E-10 2.6E-14 121.7 13.7 35 271-305 3-37 (389)
35 2qcu_A Aerobic glycerol-3-phos 99.0 1.7E-09 6E-14 123.6 15.7 66 446-520 151-216 (501)
36 3ps9_A TRNA 5-methylaminomethy 99.0 3.6E-10 1.2E-14 134.1 8.7 35 270-304 271-305 (676)
37 3v76_A Flavoprotein; structura 99.0 1.3E-09 4.5E-14 121.5 12.5 38 268-305 24-61 (417)
38 3pvc_A TRNA 5-methylaminomethy 99.0 1E-09 3.5E-14 130.5 11.6 36 269-304 262-297 (689)
39 3axb_A Putative oxidoreductase 99.0 1.3E-09 4.4E-14 122.7 11.0 34 270-303 22-56 (448)
40 3ka7_A Oxidoreductase; structu 98.9 7.5E-09 2.6E-13 115.3 16.0 61 446-519 198-258 (425)
41 1rp0_A ARA6, thiazole biosynth 98.9 3.8E-09 1.3E-13 111.6 12.3 36 270-305 38-74 (284)
42 2e5v_A L-aspartate oxidase; ar 98.9 3E-09 1E-13 120.6 11.9 31 273-303 1-31 (472)
43 4dgk_A Phytoene dehydrogenase; 98.9 1.9E-09 6.6E-14 122.9 9.2 63 446-520 223-285 (501)
44 2uzz_A N-methyl-L-tryptophan o 98.9 5.5E-09 1.9E-13 114.1 11.8 35 271-305 2-36 (372)
45 3cgv_A Geranylgeranyl reductas 98.9 7.3E-09 2.5E-13 114.0 12.8 68 447-525 104-172 (397)
46 2gqf_A Hypothetical protein HI 98.8 1.3E-08 4.5E-13 112.9 12.3 36 270-305 3-38 (401)
47 3jsk_A Cypbp37 protein; octame 98.8 1.2E-08 4.1E-13 109.8 11.3 35 270-304 78-114 (344)
48 3nlc_A Uncharacterized protein 98.8 1.7E-08 5.7E-13 116.1 11.6 38 268-305 104-141 (549)
49 3nrn_A Uncharacterized protein 98.8 7.7E-08 2.6E-12 107.1 16.0 34 273-306 2-35 (421)
50 2bcg_G Secretory pathway GDP d 98.7 2E-08 6.9E-13 113.3 10.7 41 268-308 8-48 (453)
51 3c4n_A Uncharacterized protein 98.7 6.5E-09 2.2E-13 115.5 6.3 35 270-304 35-71 (405)
52 3oz2_A Digeranylgeranylglycero 98.7 5.6E-09 1.9E-13 114.5 5.7 67 447-524 104-171 (397)
53 3p1w_A Rabgdi protein; GDI RAB 98.7 1.7E-08 5.8E-13 113.7 9.3 41 268-308 17-57 (475)
54 3e1t_A Halogenase; flavoprotei 98.7 6.2E-08 2.1E-12 111.0 14.2 58 447-512 113-171 (512)
55 2gjc_A Thiazole biosynthetic e 98.7 4.7E-08 1.6E-12 104.6 11.1 35 270-304 64-100 (326)
56 3ihg_A RDME; flavoenzyme, anth 98.6 5.8E-07 2E-11 103.5 17.6 36 270-305 4-39 (535)
57 1c0p_A D-amino acid oxidase; a 98.6 1.2E-08 4.2E-13 111.3 3.2 37 268-304 3-39 (363)
58 3nix_A Flavoprotein/dehydrogen 98.6 1.1E-07 3.6E-12 105.8 10.5 36 270-305 4-39 (421)
59 3atr_A Conserved archaeal prot 98.6 1.3E-07 4.4E-12 106.6 10.9 54 452-512 108-161 (453)
60 3ces_A MNMG, tRNA uridine 5-ca 98.6 9E-08 3.1E-12 111.0 9.5 35 270-304 27-61 (651)
61 2zxi_A TRNA uridine 5-carboxym 98.6 7.7E-08 2.6E-12 111.2 8.3 35 270-304 26-60 (637)
62 3f8d_A Thioredoxin reductase ( 98.5 9.4E-07 3.2E-11 93.8 15.8 68 450-524 195-262 (323)
63 3i3l_A Alkylhalidase CMLS; fla 98.5 2.5E-07 8.5E-12 107.6 12.1 36 270-305 22-57 (591)
64 3fmw_A Oxygenase; mithramycin, 98.5 1E-06 3.6E-11 102.0 16.7 36 270-305 48-83 (570)
65 3cp8_A TRNA uridine 5-carboxym 98.5 1.1E-07 3.6E-12 110.4 8.1 37 268-304 18-54 (641)
66 2qa1_A PGAE, polyketide oxygen 98.5 1.1E-06 3.9E-11 100.2 15.7 37 268-304 8-44 (500)
67 3cty_A Thioredoxin reductase; 98.5 9.1E-07 3.1E-11 94.4 13.9 66 452-524 198-263 (319)
68 1d5t_A Guanine nucleotide diss 98.5 4.3E-07 1.5E-11 101.7 11.6 41 268-308 3-43 (433)
69 2gmh_A Electron transfer flavo 98.5 1.8E-07 6.1E-12 108.9 8.2 37 269-305 33-75 (584)
70 3lxd_A FAD-dependent pyridine 98.4 8.7E-07 3E-11 98.6 12.8 65 450-526 199-264 (415)
71 4a9w_A Monooxygenase; baeyer-v 98.4 4.5E-07 1.5E-11 97.7 9.9 34 271-304 3-36 (357)
72 2qa2_A CABE, polyketide oxygen 98.4 1.5E-06 5.1E-11 99.1 14.6 37 268-304 9-45 (499)
73 1mo9_A ORF3; nucleotide bindin 98.4 2.9E-06 1E-10 97.3 16.9 38 268-305 40-77 (523)
74 3rp8_A Flavoprotein monooxygen 98.4 7.4E-07 2.5E-11 98.7 11.2 37 268-304 20-56 (407)
75 3itj_A Thioredoxin reductase 1 98.4 6.3E-07 2.1E-11 96.0 10.1 63 450-518 214-276 (338)
76 1yvv_A Amine oxidase, flavin-c 98.4 3.9E-07 1.3E-11 97.8 8.2 35 271-305 2-36 (336)
77 3ab1_A Ferredoxin--NADP reduct 98.4 9.9E-07 3.4E-11 95.8 11.2 68 450-524 207-274 (360)
78 2cul_A Glucose-inhibited divis 98.4 6.8E-07 2.3E-11 91.2 9.1 34 271-304 3-36 (232)
79 3kkj_A Amine oxidase, flavin-c 98.3 3E-07 1E-11 93.6 5.0 35 271-305 2-36 (336)
80 3qj4_A Renalase; FAD/NAD(P)-bi 98.3 9.9E-07 3.4E-11 95.2 8.8 33 272-304 2-37 (342)
81 3fg2_P Putative rubredoxin red 98.3 3.8E-06 1.3E-10 93.0 13.4 65 450-526 189-254 (404)
82 1k0i_A P-hydroxybenzoate hydro 98.3 1.2E-06 4E-11 96.5 9.1 34 271-304 2-35 (394)
83 2r0c_A REBC; flavin adenine di 98.2 1.2E-05 4E-10 92.9 16.6 35 270-304 25-59 (549)
84 2bry_A NEDD9 interacting prote 98.2 7.5E-07 2.6E-11 101.6 5.6 36 269-304 90-125 (497)
85 1q1r_A Putidaredoxin reductase 98.2 1.2E-05 4.2E-10 89.8 15.1 60 454-525 201-262 (431)
86 3r9u_A Thioredoxin reductase; 98.2 5.6E-06 1.9E-10 87.5 11.8 59 450-515 188-246 (315)
87 2q0l_A TRXR, thioredoxin reduc 98.2 7.6E-06 2.6E-10 86.6 12.5 32 272-303 2-34 (311)
88 4gut_A Lysine-specific histone 98.2 8E-06 2.7E-10 97.6 13.6 37 270-306 335-371 (776)
89 2q7v_A Thioredoxin reductase; 98.2 4.3E-06 1.5E-10 89.3 10.2 37 268-304 5-41 (325)
90 3lzw_A Ferredoxin--NADP reduct 98.2 4.7E-06 1.6E-10 88.8 10.0 35 270-304 6-40 (332)
91 3iwa_A FAD-dependent pyridine 98.1 5.5E-06 1.9E-10 93.7 10.4 63 450-525 207-270 (472)
92 3s5w_A L-ornithine 5-monooxyge 98.1 4.6E-06 1.6E-10 93.9 9.6 36 270-305 29-69 (463)
93 1fl2_A Alkyl hydroperoxide red 98.1 8E-06 2.7E-10 86.4 10.7 32 271-302 1-32 (310)
94 4fk1_A Putative thioredoxin re 98.1 2.1E-06 7.3E-11 91.0 5.0 35 270-304 5-39 (304)
95 2gv8_A Monooxygenase; FMO, FAD 98.1 1.8E-05 6E-10 88.9 12.4 36 270-305 5-42 (447)
96 1w4x_A Phenylacetone monooxyge 98.0 1.2E-05 4E-10 92.8 10.8 37 269-305 14-50 (542)
97 3uox_A Otemo; baeyer-villiger 98.0 9.4E-06 3.2E-10 93.5 9.8 36 269-304 7-42 (545)
98 4gcm_A TRXR, thioredoxin reduc 98.0 3.1E-06 1.1E-10 89.9 5.3 35 270-304 5-39 (312)
99 2pyx_A Tryptophan halogenase; 98.0 8.8E-06 3E-10 93.4 8.7 35 270-304 6-52 (526)
100 4a5l_A Thioredoxin reductase; 98.0 3.2E-06 1.1E-10 89.6 4.6 35 270-304 3-37 (314)
101 4ap3_A Steroid monooxygenase; 98.0 9.4E-06 3.2E-10 93.6 8.2 36 269-304 19-54 (549)
102 2xve_A Flavin-containing monoo 98.0 5.2E-05 1.8E-09 85.5 14.0 34 272-305 3-42 (464)
103 3fpz_A Thiazole biosynthetic e 98.0 4E-06 1.4E-10 89.9 4.5 36 270-305 64-101 (326)
104 3gwf_A Cyclohexanone monooxyge 97.9 7.3E-06 2.5E-10 94.3 5.7 35 270-304 7-42 (540)
105 4gde_A UDP-galactopyranose mut 97.9 5.5E-06 1.9E-10 94.3 4.5 39 270-308 9-48 (513)
106 4b1b_A TRXR, thioredoxin reduc 97.8 9.1E-06 3.1E-10 93.3 5.1 38 268-305 39-76 (542)
107 3k7m_X 6-hydroxy-L-nicotine ox 97.8 9E-06 3.1E-10 90.4 4.9 35 272-306 2-36 (431)
108 1hyu_A AHPF, alkyl hydroperoxi 97.8 6.1E-05 2.1E-09 86.3 10.9 34 269-302 210-243 (521)
109 3ics_A Coenzyme A-disulfide re 97.8 9.7E-05 3.3E-09 85.9 12.7 37 270-306 35-73 (588)
110 3cgb_A Pyridine nucleotide-dis 97.8 7.6E-05 2.6E-09 84.5 11.1 36 271-306 36-73 (480)
111 2gag_A Heterotetrameric sarcos 97.7 6.7E-05 2.3E-09 92.2 11.0 65 453-522 325-392 (965)
112 1gte_A Dihydropyrimidine dehyd 97.7 0.00015 5.1E-09 89.7 14.0 68 453-525 379-456 (1025)
113 3ef6_A Toluene 1,2-dioxygenase 97.7 7.8E-05 2.7E-09 82.6 10.1 64 450-526 190-254 (410)
114 1v0j_A UDP-galactopyranose mut 97.7 2E-05 6.8E-10 87.2 4.9 39 268-306 4-43 (399)
115 3ic9_A Dihydrolipoamide dehydr 97.7 1.8E-05 6.1E-10 90.1 4.0 35 270-304 7-41 (492)
116 3hdq_A UDP-galactopyranose mut 97.6 3.6E-05 1.2E-09 84.8 5.7 39 268-306 26-64 (397)
117 2vvm_A Monoamine oxidase N; FA 97.6 3.2E-05 1.1E-09 87.7 5.2 38 270-307 38-75 (495)
118 4b63_A L-ornithine N5 monooxyg 97.6 0.0001 3.5E-09 84.0 9.0 64 446-511 146-212 (501)
119 1s3e_A Amine oxidase [flavin-c 97.6 3.4E-05 1.2E-09 88.2 5.1 37 270-306 3-39 (520)
120 1i8t_A UDP-galactopyranose mut 97.6 3.3E-05 1.1E-09 84.4 4.7 36 271-306 1-36 (367)
121 2x3n_A Probable FAD-dependent 97.6 3.5E-05 1.2E-09 84.8 4.9 36 270-305 5-40 (399)
122 3c96_A Flavin-containing monoo 97.6 3.6E-05 1.2E-09 85.2 4.8 35 271-305 4-39 (410)
123 2e1m_A L-glutamate oxidase; L- 97.6 5.9E-05 2E-09 82.4 6.4 37 269-305 42-79 (376)
124 3dgh_A TRXR-1, thioredoxin red 97.6 3.9E-05 1.3E-09 86.9 5.2 36 269-304 7-42 (483)
125 3alj_A 2-methyl-3-hydroxypyrid 97.6 4E-05 1.4E-09 83.8 5.1 35 271-305 11-45 (379)
126 2ivd_A PPO, PPOX, protoporphyr 97.6 3.6E-05 1.2E-09 86.8 4.7 40 268-307 13-52 (478)
127 3o0h_A Glutathione reductase; 97.6 4.1E-05 1.4E-09 86.8 5.1 35 270-304 25-59 (484)
128 2jae_A L-amino acid oxidase; o 97.6 5.7E-05 1.9E-09 85.5 6.3 41 268-308 8-48 (489)
129 3lad_A Dihydrolipoamide dehydr 97.6 3.2E-05 1.1E-09 87.4 4.1 35 270-304 2-36 (476)
130 2xdo_A TETX2 protein; tetracyc 97.6 4.6E-05 1.6E-09 83.9 5.2 36 270-305 25-60 (398)
131 3ntd_A FAD-dependent pyridine 97.5 0.00042 1.4E-08 80.0 13.2 35 272-306 2-38 (565)
132 2b9w_A Putative aminooxidase; 97.5 5.9E-05 2E-09 83.6 5.8 37 270-306 5-42 (424)
133 3l8k_A Dihydrolipoyl dehydroge 97.5 4.7E-05 1.6E-09 85.9 4.9 36 270-305 3-38 (466)
134 2vou_A 2,6-dihydroxypyridine h 97.5 6.2E-05 2.1E-09 82.8 5.4 35 270-304 4-38 (397)
135 1rsg_A FMS1 protein; FAD bindi 97.5 5.1E-05 1.8E-09 86.7 4.7 38 270-307 7-45 (516)
136 2yg5_A Putrescine oxidase; oxi 97.5 6.1E-05 2.1E-09 84.3 5.2 38 270-307 4-41 (453)
137 3g3e_A D-amino-acid oxidase; F 97.5 4E-05 1.4E-09 82.8 3.5 32 273-304 2-39 (351)
138 3i6d_A Protoporphyrinogen oxid 97.5 4.1E-05 1.4E-09 85.9 3.6 37 271-307 5-47 (470)
139 1sez_A Protoporphyrinogen oxid 97.5 6.6E-05 2.3E-09 85.3 5.4 40 268-307 10-49 (504)
140 3nks_A Protoporphyrinogen oxid 97.5 5.7E-05 2E-09 85.1 4.8 35 272-306 3-39 (477)
141 4dna_A Probable glutathione re 97.5 5.8E-05 2E-09 85.1 4.8 35 270-304 4-38 (463)
142 3ihm_A Styrene monooxygenase A 97.5 5E-05 1.7E-09 84.8 4.2 35 270-304 21-55 (430)
143 3fbs_A Oxidoreductase; structu 97.5 6.8E-05 2.3E-09 78.4 4.9 34 271-304 2-35 (297)
144 3urh_A Dihydrolipoyl dehydroge 97.5 6.5E-05 2.2E-09 85.3 5.0 36 270-305 24-59 (491)
145 3qfa_A Thioredoxin reductase 1 97.5 7.6E-05 2.6E-09 85.4 5.5 37 268-304 29-65 (519)
146 2ywl_A Thioredoxin reductase r 97.5 8.2E-05 2.8E-09 72.1 4.8 33 272-304 2-34 (180)
147 2zbw_A Thioredoxin reductase; 97.4 8.2E-05 2.8E-09 79.5 5.1 35 270-304 4-38 (335)
148 3dk9_A Grase, GR, glutathione 97.4 6.6E-05 2.2E-09 84.9 4.3 36 269-304 18-53 (478)
149 3dgz_A Thioredoxin reductase 2 97.4 8E-05 2.7E-09 84.5 4.8 35 270-304 5-39 (488)
150 2r9z_A Glutathione amide reduc 97.4 0.0001 3.4E-09 83.1 5.0 35 270-304 3-37 (463)
151 1ojt_A Surface protein; redox- 97.4 9.7E-05 3.3E-09 83.7 4.7 38 268-305 3-40 (482)
152 1fec_A Trypanothione reductase 97.4 8.7E-05 3E-09 84.3 4.3 33 270-302 2-35 (490)
153 1vg0_A RAB proteins geranylger 97.4 0.0001 3.5E-09 85.5 4.9 44 268-311 5-48 (650)
154 2aqj_A Tryptophan halogenase, 97.4 0.00011 3.8E-09 84.4 5.1 35 270-304 4-41 (538)
155 1ges_A Glutathione reductase; 97.4 9.9E-05 3.4E-09 82.8 4.5 35 270-304 3-37 (450)
156 2dkh_A 3-hydroxybenzoate hydro 97.3 0.00011 3.6E-09 86.4 4.9 36 269-304 30-66 (639)
157 2a87_A TRXR, TR, thioredoxin r 97.3 9.7E-05 3.3E-09 79.2 4.1 36 268-303 11-46 (335)
158 1zk7_A HGII, reductase, mercur 97.3 0.00013 4.4E-09 82.3 5.3 35 270-304 3-37 (467)
159 2qae_A Lipoamide, dihydrolipoy 97.3 0.00013 4.5E-09 82.2 5.1 35 271-305 2-36 (468)
160 2hqm_A GR, grase, glutathione 97.3 0.00012 4.1E-09 82.9 4.8 35 270-304 10-44 (479)
161 1v59_A Dihydrolipoamide dehydr 97.3 9.9E-05 3.4E-09 83.4 4.1 36 270-305 4-39 (478)
162 3g5s_A Methylenetetrahydrofola 97.3 0.00015 5E-09 78.7 4.9 34 272-305 2-35 (443)
163 3lov_A Protoporphyrinogen oxid 97.3 0.00012 4E-09 82.6 4.4 36 271-306 4-41 (475)
164 2weu_A Tryptophan 5-halogenase 97.3 9.6E-05 3.3E-09 84.3 3.3 34 271-304 2-38 (511)
165 2yqu_A 2-oxoglutarate dehydrog 97.3 0.00015 5.2E-09 81.4 4.8 35 271-305 1-35 (455)
166 1onf_A GR, grase, glutathione 97.3 0.00016 5.4E-09 82.4 4.9 34 271-304 2-35 (500)
167 3d1c_A Flavin-containing putat 97.3 0.00016 5.4E-09 78.3 4.8 34 271-304 4-38 (369)
168 3c4a_A Probable tryptophan hyd 97.3 0.00014 4.8E-09 79.6 4.3 33 273-305 2-36 (381)
169 4hb9_A Similarities with proba 97.3 0.0002 6.9E-09 78.4 5.5 32 273-304 3-34 (412)
170 1trb_A Thioredoxin reductase; 97.3 0.00012 4.1E-09 77.6 3.5 34 270-303 4-37 (320)
171 2bi7_A UDP-galactopyranose mut 97.2 0.00019 6.5E-09 78.8 5.1 36 271-306 3-38 (384)
172 1zmd_A Dihydrolipoyl dehydroge 97.2 0.00016 5.6E-09 81.5 4.7 36 270-305 5-40 (474)
173 2iid_A L-amino-acid oxidase; f 97.2 0.00018 6.3E-09 81.5 5.1 39 269-307 31-69 (498)
174 1ebd_A E3BD, dihydrolipoamide 97.2 0.00018 6.1E-09 80.8 4.5 35 270-304 2-36 (455)
175 1vdc_A NTR, NADPH dependent th 97.2 0.00016 5.4E-09 77.1 3.9 33 270-302 7-39 (333)
176 2wpf_A Trypanothione reductase 97.2 0.00016 5.6E-09 82.1 4.2 35 268-302 4-39 (495)
177 2a8x_A Dihydrolipoyl dehydroge 97.2 0.00019 6.5E-09 80.8 4.7 34 271-304 3-36 (464)
178 1dxl_A Dihydrolipoamide dehydr 97.2 0.00018 6.1E-09 81.1 4.4 37 270-306 5-41 (470)
179 2e4g_A Tryptophan halogenase; 97.2 0.00022 7.4E-09 82.2 5.0 36 270-305 24-62 (550)
180 4dsg_A UDP-galactopyranose mut 97.2 0.00024 8.3E-09 80.5 5.3 37 270-306 8-45 (484)
181 1xdi_A RV3303C-LPDA; reductase 97.1 0.00018 6.3E-09 81.7 3.8 34 271-304 2-38 (499)
182 1lvl_A Dihydrolipoamide dehydr 97.1 0.00024 8.1E-09 79.9 4.4 35 270-304 4-38 (458)
183 2eq6_A Pyruvate dehydrogenase 97.1 0.00028 9.6E-09 79.4 4.7 34 271-304 6-39 (464)
184 3k30_A Histamine dehydrogenase 97.1 0.00035 1.2E-08 82.7 5.6 39 268-306 388-426 (690)
185 1pn0_A Phenol 2-monooxygenase; 97.1 0.0003 1E-08 82.8 4.8 35 270-304 7-46 (665)
186 1b37_A Protein (polyamine oxid 97.0 0.00036 1.2E-08 78.6 4.9 37 270-306 3-40 (472)
187 2vdc_G Glutamate synthase [NAD 97.0 0.00042 1.4E-08 77.9 4.7 37 270-306 121-157 (456)
188 2x8g_A Thioredoxin glutathione 97.0 0.00042 1.4E-08 80.6 4.9 34 270-303 106-139 (598)
189 2v3a_A Rubredoxin reductase; a 96.9 0.00062 2.1E-08 74.5 4.9 35 270-304 3-39 (384)
190 2cdu_A NADPH oxidase; flavoenz 96.8 0.00057 2E-08 76.6 4.3 34 272-305 1-36 (452)
191 2v3a_A Rubredoxin reductase; a 96.8 0.0065 2.2E-07 66.3 12.1 33 272-304 146-178 (384)
192 1o94_A Tmadh, trimethylamine d 96.7 0.0011 3.7E-08 79.0 5.9 38 269-306 387-424 (729)
193 3oc4_A Oxidoreductase, pyridin 96.7 0.00084 2.9E-08 75.2 4.6 35 272-306 3-39 (452)
194 1ps9_A 2,4-dienoyl-COA reducta 96.7 0.0013 4.3E-08 77.7 6.2 38 269-306 371-408 (671)
195 1xhc_A NADH oxidase /nitrite r 96.7 0.00087 3E-08 73.0 4.4 35 271-306 8-42 (367)
196 1m6i_A Programmed cell death p 96.7 0.00095 3.2E-08 75.7 4.9 39 268-306 8-48 (493)
197 2z3y_A Lysine-specific histone 96.7 0.0011 3.8E-08 78.1 5.5 38 269-306 105-142 (662)
198 2eq6_A Pyruvate dehydrogenase 96.7 0.0074 2.5E-07 67.7 11.6 33 272-304 170-202 (464)
199 1y56_A Hypothetical protein PH 96.6 0.00073 2.5E-08 76.7 3.2 59 453-524 266-324 (493)
200 3kd9_A Coenzyme A disulfide re 96.6 0.0012 4E-08 73.9 4.8 63 449-525 194-256 (449)
201 3h28_A Sulfide-quinone reducta 96.6 0.0013 4.4E-08 73.1 5.1 35 272-306 3-39 (430)
202 2bc0_A NADH oxidase; flavoprot 96.6 0.00087 3E-08 76.0 3.6 35 271-305 35-72 (490)
203 1trb_A Thioredoxin reductase; 96.6 0.0076 2.6E-07 63.4 10.7 57 456-518 196-252 (320)
204 2xag_A Lysine-specific histone 96.6 0.0017 5.9E-08 78.1 6.2 39 269-307 276-314 (852)
205 1nhp_A NADH peroxidase; oxidor 96.6 0.0011 3.8E-08 74.1 4.2 35 272-306 1-37 (447)
206 2gqw_A Ferredoxin reductase; f 96.6 0.0013 4.6E-08 72.5 4.7 37 270-306 6-44 (408)
207 3h8l_A NADH oxidase; membrane 96.5 0.0012 4.2E-08 72.7 4.1 34 272-305 2-38 (409)
208 1v59_A Dihydrolipoamide dehydr 96.5 0.0076 2.6E-07 67.8 10.7 33 272-304 184-216 (478)
209 3sx6_A Sulfide-quinone reducta 96.5 0.0016 5.4E-08 72.6 4.8 35 271-305 4-41 (437)
210 2q0l_A TRXR, thioredoxin reduc 96.4 0.013 4.6E-07 61.3 11.2 57 459-521 193-249 (311)
211 1fl2_A Alkyl hydroperoxide red 96.3 0.018 6.2E-07 60.3 11.3 54 459-518 194-247 (310)
212 1lqt_A FPRA; NADP+ derivative, 96.2 0.0023 7.7E-08 71.9 4.0 35 271-305 3-44 (456)
213 1cjc_A Protein (adrenodoxin re 96.2 0.0031 1.1E-07 70.8 4.6 37 270-306 5-43 (460)
214 1ges_A Glutathione reductase; 96.0 0.014 4.7E-07 65.2 9.0 32 273-304 169-200 (450)
215 1ebd_A E3BD, dihydrolipoamide 95.9 0.022 7.6E-07 63.6 10.4 33 272-304 171-203 (455)
216 2zbw_A Thioredoxin reductase; 95.9 0.033 1.1E-06 58.9 11.1 59 459-524 205-263 (335)
217 3ayj_A Pro-enzyme of L-phenyla 95.9 0.0032 1.1E-07 73.9 3.1 36 271-306 56-100 (721)
218 3ic9_A Dihydrolipoamide dehydr 95.8 0.038 1.3E-06 62.4 11.4 33 272-304 175-207 (492)
219 3lzw_A Ferredoxin--NADP reduct 95.7 0.043 1.5E-06 57.7 11.0 60 457-524 202-261 (332)
220 2q7v_A Thioredoxin reductase; 95.7 0.075 2.6E-06 55.9 12.8 33 272-304 153-185 (325)
221 4eqs_A Coenzyme A disulfide re 95.6 0.0065 2.2E-07 67.6 4.4 33 274-306 3-37 (437)
222 2qae_A Lipoamide, dihydrolipoy 95.6 0.046 1.6E-06 61.2 11.4 33 272-304 175-207 (468)
223 3s5w_A L-ornithine 5-monooxyge 95.6 0.18 6.1E-06 56.1 16.1 36 271-306 227-264 (463)
224 1zmd_A Dihydrolipoyl dehydroge 95.6 0.051 1.8E-06 60.9 11.6 33 272-304 179-211 (474)
225 3vrd_B FCCB subunit, flavocyto 95.5 0.0083 2.8E-07 65.7 4.4 33 273-305 4-38 (401)
226 3uox_A Otemo; baeyer-villiger 95.4 0.14 4.7E-06 58.6 14.5 34 272-305 186-219 (545)
227 3klj_A NAD(FAD)-dependent dehy 95.4 0.012 4E-07 64.5 5.0 37 270-306 8-44 (385)
228 4g6h_A Rotenone-insensitive NA 95.3 0.0085 2.9E-07 68.0 4.0 36 270-305 41-76 (502)
229 2hqm_A GR, grase, glutathione 95.3 0.034 1.2E-06 62.6 8.8 32 273-304 187-218 (479)
230 1vdc_A NTR, NADPH dependent th 95.3 0.086 2.9E-06 55.6 11.6 33 272-304 160-192 (333)
231 3urh_A Dihydrolipoyl dehydroge 95.3 0.069 2.3E-06 60.2 11.2 33 272-304 199-231 (491)
232 3dgh_A TRXR-1, thioredoxin red 95.2 0.072 2.4E-06 59.9 11.0 31 273-303 189-219 (483)
233 3hyw_A Sulfide-quinone reducta 95.0 0.012 4.1E-07 65.3 3.9 62 449-524 204-266 (430)
234 2a87_A TRXR, TR, thioredoxin r 95.0 0.11 3.6E-06 55.1 11.1 33 272-304 156-188 (335)
235 3dgz_A Thioredoxin reductase 2 94.9 0.098 3.3E-06 58.9 11.1 32 273-304 187-218 (488)
236 3o0h_A Glutathione reductase; 94.7 0.068 2.3E-06 60.1 9.0 33 272-304 192-224 (484)
237 3lad_A Dihydrolipoamide dehydr 94.6 0.2 6.7E-06 56.1 12.5 33 272-304 181-213 (476)
238 1hyu_A AHPF, alkyl hydroperoxi 94.5 0.13 4.3E-06 58.6 10.8 54 459-518 405-458 (521)
239 3oc4_A Oxidoreductase, pyridin 94.1 0.2 7E-06 55.6 11.2 33 272-304 148-180 (452)
240 4g6h_A Rotenone-insensitive NA 94.0 0.34 1.2E-05 54.7 12.9 78 456-542 284-371 (502)
241 4dna_A Probable glutathione re 93.7 0.15 5.1E-06 56.9 9.2 33 272-304 171-203 (463)
242 3fwz_A Inner membrane protein 93.2 0.098 3.3E-06 48.1 5.5 34 271-304 7-40 (140)
243 3llv_A Exopolyphosphatase-rela 92.4 0.11 3.6E-06 47.7 4.5 32 273-304 8-39 (141)
244 2g1u_A Hypothetical protein TM 92.3 0.11 3.8E-06 48.6 4.6 33 272-304 20-52 (155)
245 1lss_A TRK system potassium up 92.3 0.12 4.1E-06 46.8 4.6 32 273-304 6-37 (140)
246 1nhp_A NADH peroxidase; oxidor 92.2 0.11 3.9E-06 57.5 5.3 35 271-305 149-183 (447)
247 3klj_A NAD(FAD)-dependent dehy 91.8 0.11 3.8E-06 56.6 4.4 36 273-308 148-183 (385)
248 1id1_A Putative potassium chan 91.4 0.16 5.4E-06 47.3 4.5 31 273-303 5-35 (153)
249 4gcm_A TRXR, thioredoxin reduc 91.2 0.18 6.1E-06 52.7 5.2 33 273-305 147-179 (312)
250 3k30_A Histamine dehydrogenase 91.2 0.56 1.9E-05 55.2 9.9 32 273-304 525-558 (690)
251 2yqu_A 2-oxoglutarate dehydrog 90.3 0.24 8.3E-06 55.0 5.5 34 272-305 168-201 (455)
252 3ic5_A Putative saccharopine d 90.3 0.22 7.5E-06 43.5 4.1 32 273-304 7-39 (118)
253 1lvl_A Dihydrolipoamide dehydr 90.2 0.2 7E-06 55.7 4.7 34 272-305 172-205 (458)
254 1xhc_A NADH oxidase /nitrite r 90.0 0.25 8.5E-06 53.3 5.0 33 273-305 145-177 (367)
255 2hmt_A YUAA protein; RCK, KTN, 89.9 0.22 7.5E-06 45.2 3.9 32 273-304 8-39 (144)
256 3ado_A Lambda-crystallin; L-gu 89.7 0.24 8.2E-06 52.4 4.5 32 273-304 8-39 (319)
257 3i83_A 2-dehydropantoate 2-red 89.4 0.29 1E-05 51.7 5.0 32 273-304 4-35 (320)
258 4a5l_A Thioredoxin reductase; 89.4 0.31 1E-05 50.7 5.1 34 272-305 153-186 (314)
259 3hn2_A 2-dehydropantoate 2-red 89.3 0.3 1E-05 51.4 4.9 32 273-304 4-35 (312)
260 3c85_A Putative glutathione-re 88.6 0.28 9.4E-06 47.1 3.8 32 273-304 41-73 (183)
261 2gqw_A Ferredoxin reductase; f 88.4 0.4 1.4E-05 52.4 5.3 35 272-306 146-180 (408)
262 1f0y_A HCDH, L-3-hydroxyacyl-C 88.1 0.39 1.3E-05 50.2 4.8 32 273-304 17-48 (302)
263 3l4b_C TRKA K+ channel protien 87.8 0.33 1.1E-05 48.1 3.8 31 274-304 3-33 (218)
264 4e12_A Diketoreductase; oxidor 87.7 0.43 1.5E-05 49.4 4.8 32 273-304 6-37 (283)
265 3cgb_A Pyridine nucleotide-dis 87.4 0.32 1.1E-05 54.5 3.8 33 272-304 187-219 (480)
266 1ks9_A KPA reductase;, 2-dehyd 87.3 0.5 1.7E-05 48.6 5.0 31 274-304 3-33 (291)
267 3ghy_A Ketopantoate reductase 87.2 0.44 1.5E-05 50.7 4.6 31 273-303 5-35 (335)
268 3d1c_A Flavin-containing putat 87.1 0.46 1.6E-05 50.6 4.7 33 273-305 168-200 (369)
269 2bc0_A NADH oxidase; flavoprot 87.0 0.53 1.8E-05 52.8 5.3 33 273-305 196-228 (490)
270 2r9z_A Glutathione amide reduc 86.9 0.5 1.7E-05 52.7 5.0 32 273-304 168-199 (463)
271 3g17_A Similar to 2-dehydropan 86.7 0.34 1.2E-05 50.5 3.3 32 273-304 4-35 (294)
272 2raf_A Putative dinucleotide-b 86.5 0.63 2.2E-05 45.8 5.0 33 272-304 20-52 (209)
273 2a8x_A Dihydrolipoyl dehydroge 86.4 0.62 2.1E-05 51.8 5.4 34 272-305 172-205 (464)
274 1q1r_A Putidaredoxin reductase 85.9 0.6 2.1E-05 51.4 5.0 34 272-305 150-183 (431)
275 2ew2_A 2-dehydropantoate 2-red 85.8 0.61 2.1E-05 48.6 4.8 32 273-304 5-36 (316)
276 3kd9_A Coenzyme A disulfide re 85.8 0.7 2.4E-05 51.1 5.5 35 273-307 150-184 (449)
277 1ojt_A Surface protein; redox- 85.7 0.56 1.9E-05 52.5 4.7 34 272-305 186-219 (482)
278 1jw9_B Molybdopterin biosynthe 85.6 0.54 1.8E-05 47.8 4.0 33 272-304 32-65 (249)
279 3ef6_A Toluene 1,2-dioxygenase 85.5 0.69 2.4E-05 50.5 5.2 34 272-305 144-177 (410)
280 3fg2_P Putative rubredoxin red 85.5 0.96 3.3E-05 49.2 6.3 36 272-307 143-178 (404)
281 3ego_A Probable 2-dehydropanto 85.4 0.65 2.2E-05 48.7 4.7 31 273-304 4-34 (307)
282 2dpo_A L-gulonate 3-dehydrogen 85.2 0.66 2.3E-05 49.0 4.6 32 273-304 8-39 (319)
283 4eqs_A Coenzyme A disulfide re 85.2 0.63 2.2E-05 51.4 4.7 33 273-305 149-181 (437)
284 3hwr_A 2-dehydropantoate 2-red 85.1 0.66 2.3E-05 48.9 4.6 31 272-303 20-50 (318)
285 2y0c_A BCEC, UDP-glucose dehyd 85.0 0.66 2.2E-05 52.0 4.8 33 272-304 9-41 (478)
286 1onf_A GR, grase, glutathione 84.9 0.77 2.6E-05 51.7 5.3 33 273-305 178-210 (500)
287 2gv8_A Monooxygenase; FMO, FAD 84.8 0.64 2.2E-05 51.4 4.5 33 272-304 213-246 (447)
288 2xve_A Flavin-containing monoo 84.8 0.67 2.3E-05 51.6 4.7 33 272-304 198-230 (464)
289 3lxd_A FAD-dependent pyridine 84.7 0.95 3.2E-05 49.4 5.8 35 273-307 154-188 (415)
290 1lld_A L-lactate dehydrogenase 84.6 0.75 2.6E-05 48.3 4.8 32 273-304 9-42 (319)
291 1dxl_A Dihydrolipoamide dehydr 84.5 0.56 1.9E-05 52.2 3.9 34 272-305 178-211 (470)
292 2cdu_A NADPH oxidase; flavoenz 84.5 0.81 2.8E-05 50.6 5.2 33 273-305 151-183 (452)
293 1zk7_A HGII, reductase, mercur 84.3 0.92 3.1E-05 50.4 5.5 33 273-305 178-210 (467)
294 3k6j_A Protein F01G10.3, confi 84.1 0.78 2.7E-05 50.9 4.8 32 273-304 56-87 (460)
295 3gwf_A Cyclohexanone monooxyge 83.9 0.7 2.4E-05 52.6 4.4 34 272-305 179-212 (540)
296 3dfz_A SIRC, precorrin-2 dehyd 83.9 0.77 2.6E-05 45.8 4.2 31 273-303 33-63 (223)
297 1z82_A Glycerol-3-phosphate de 83.8 0.85 2.9E-05 48.4 4.8 34 270-303 13-46 (335)
298 1zcj_A Peroxisomal bifunctiona 83.4 0.81 2.8E-05 51.0 4.6 32 273-304 39-70 (463)
299 1pzg_A LDH, lactate dehydrogen 83.2 0.92 3.1E-05 48.2 4.7 32 273-304 11-43 (331)
300 3ntd_A FAD-dependent pyridine 83.1 1 3.4E-05 51.4 5.3 33 273-305 153-185 (565)
301 1zej_A HBD-9, 3-hydroxyacyl-CO 83.1 0.93 3.2E-05 47.3 4.6 33 271-304 12-44 (293)
302 1bg6_A N-(1-D-carboxylethyl)-L 83.1 0.93 3.2E-05 48.3 4.8 32 273-304 6-37 (359)
303 1txg_A Glycerol-3-phosphate de 83.1 0.76 2.6E-05 48.4 4.1 29 274-302 3-31 (335)
304 1mv8_A GMD, GDP-mannose 6-dehy 82.6 0.97 3.3E-05 49.9 4.8 31 274-304 3-33 (436)
305 3l8k_A Dihydrolipoyl dehydroge 82.6 1.2 3.9E-05 49.6 5.5 34 272-305 173-206 (466)
306 4ap3_A Steroid monooxygenase; 82.6 0.8 2.8E-05 52.2 4.2 34 272-305 192-225 (549)
307 3gg2_A Sugar dehydrogenase, UD 82.3 1 3.4E-05 50.1 4.8 32 273-304 4-35 (450)
308 1kyq_A Met8P, siroheme biosynt 82.3 0.65 2.2E-05 47.9 3.0 31 273-303 15-45 (274)
309 3itj_A Thioredoxin reductase 1 82.1 1.1 3.9E-05 46.6 4.9 35 272-306 174-208 (338)
310 3k96_A Glycerol-3-phosphate de 81.9 1 3.5E-05 48.4 4.5 32 273-304 31-62 (356)
311 3cty_A Thioredoxin reductase; 81.9 1 3.5E-05 46.8 4.5 35 272-306 156-190 (319)
312 2x8g_A Thioredoxin glutathione 81.8 0.99 3.4E-05 52.0 4.6 31 273-303 288-318 (598)
313 3dk9_A Grase, GR, glutathione 81.7 1.1 3.9E-05 49.8 5.0 33 273-305 189-221 (478)
314 3l9w_A Glutathione-regulated p 81.3 1.1 3.7E-05 49.2 4.5 32 273-304 6-37 (413)
315 3g79_A NDP-N-acetyl-D-galactos 81.2 1.3 4.3E-05 49.6 5.0 33 273-305 20-54 (478)
316 3ab1_A Ferredoxin--NADP reduct 81.0 1.2 4.1E-05 47.3 4.6 34 273-306 165-198 (360)
317 4g65_A TRK system potassium up 80.9 0.69 2.3E-05 51.6 2.8 31 274-304 6-36 (461)
318 1jay_A Coenzyme F420H2:NADP+ o 80.9 1.2 4.3E-05 43.4 4.4 31 274-304 3-34 (212)
319 1nyt_A Shikimate 5-dehydrogena 80.8 1.3 4.6E-05 45.4 4.8 31 273-303 121-151 (271)
320 3dtt_A NADP oxidoreductase; st 80.6 1.3 4.6E-05 44.6 4.6 33 272-304 20-52 (245)
321 3mog_A Probable 3-hydroxybutyr 80.5 1.2 4.2E-05 49.8 4.6 32 273-304 7-38 (483)
322 2vns_A Metalloreductase steap3 80.2 1.4 4.7E-05 43.5 4.5 32 273-304 30-61 (215)
323 1evy_A Glycerol-3-phosphate de 80.2 0.89 3E-05 48.8 3.3 32 273-304 17-48 (366)
324 3ics_A Coenzyme A-disulfide re 80.1 1.5 5.2E-05 50.2 5.5 34 273-306 189-222 (588)
325 3rui_A Ubiquitin-like modifier 80.1 1.5 5.1E-05 46.6 4.8 34 271-304 34-68 (340)
326 2v6b_A L-LDH, L-lactate dehydr 80.0 1.4 4.9E-05 46.0 4.8 31 274-304 3-35 (304)
327 2ewd_A Lactate dehydrogenase,; 80.0 1.5 5E-05 46.2 4.8 32 273-304 6-38 (317)
328 1mo9_A ORF3; nucleotide bindin 79.9 1.7 5.6E-05 49.2 5.5 62 456-525 267-329 (523)
329 1zud_1 Adenylyltransferase THI 79.5 1.7 5.7E-05 44.2 4.9 34 271-304 28-62 (251)
330 3g0o_A 3-hydroxyisobutyrate de 79.4 1.5 5.3E-05 45.6 4.8 32 273-304 9-40 (303)
331 3f8d_A Thioredoxin reductase ( 79.3 1.5 5.3E-05 45.2 4.8 36 272-307 155-190 (323)
332 2wpf_A Trypanothione reductase 79.3 1.4 4.6E-05 49.6 4.6 33 273-305 193-228 (495)
333 3oj0_A Glutr, glutamyl-tRNA re 79.3 0.72 2.5E-05 42.2 1.9 32 273-304 23-54 (144)
334 3pef_A 6-phosphogluconate dehy 79.3 1.6 5.4E-05 45.1 4.8 32 273-304 3-34 (287)
335 2hjr_A Malate dehydrogenase; m 79.2 1.6 5.3E-05 46.3 4.8 32 273-304 16-48 (328)
336 4a7p_A UDP-glucose dehydrogena 79.2 1.6 5.6E-05 48.2 5.1 34 271-304 8-41 (446)
337 4b1b_A TRXR, thioredoxin reduc 78.9 1.5 5E-05 49.9 4.7 32 273-304 225-256 (542)
338 3qfa_A Thioredoxin reductase 1 78.9 1.8 6.1E-05 48.9 5.4 31 273-303 212-242 (519)
339 2qyt_A 2-dehydropantoate 2-red 78.8 1.1 3.9E-05 46.6 3.5 30 273-302 10-45 (317)
340 1fec_A Trypanothione reductase 78.8 1.4 4.9E-05 49.3 4.5 34 272-305 188-224 (490)
341 3doj_A AT3G25530, dehydrogenas 78.7 1.9 6.7E-05 45.0 5.3 33 272-304 22-54 (310)
342 2pv7_A T-protein [includes: ch 78.6 1.6 5.6E-05 45.4 4.7 32 273-304 23-55 (298)
343 3c7a_A Octopine dehydrogenase; 78.4 1.2 4.2E-05 48.4 3.7 29 273-301 4-33 (404)
344 2h78_A Hibadh, 3-hydroxyisobut 78.4 1.7 5.9E-05 45.1 4.8 32 273-304 5-36 (302)
345 4dll_A 2-hydroxy-3-oxopropiona 78.2 1.8 6.1E-05 45.6 4.8 32 273-304 33-64 (320)
346 2a9f_A Putative malic enzyme ( 78.1 1.4 4.7E-05 47.6 3.9 35 270-304 187-222 (398)
347 3vtf_A UDP-glucose 6-dehydroge 78.0 1.5 5.2E-05 48.3 4.3 34 271-304 21-54 (444)
348 3qha_A Putative oxidoreductase 77.9 1.6 5.6E-05 45.3 4.4 33 272-304 16-48 (296)
349 3ojo_A CAP5O; rossmann fold, c 77.9 1.5 5.3E-05 48.2 4.3 33 272-304 12-44 (431)
350 1xdi_A RV3303C-LPDA; reductase 77.7 1.9 6.6E-05 48.3 5.2 34 272-305 183-216 (499)
351 4dio_A NAD(P) transhydrogenase 77.7 2 6.8E-05 46.8 5.0 33 272-304 191-223 (405)
352 3fbs_A Oxidoreductase; structu 77.6 1.6 5.6E-05 44.4 4.3 32 272-304 142-173 (297)
353 3lk7_A UDP-N-acetylmuramoylala 77.5 1.9 6.4E-05 47.8 5.0 32 273-304 11-42 (451)
354 3l6d_A Putative oxidoreductase 77.5 2.5 8.7E-05 44.1 5.7 33 272-304 10-42 (306)
355 2f1k_A Prephenate dehydrogenas 77.4 1.9 6.6E-05 44.0 4.8 31 274-304 3-33 (279)
356 3phh_A Shikimate dehydrogenase 77.4 2 6.9E-05 44.1 4.8 33 272-304 119-151 (269)
357 3ond_A Adenosylhomocysteinase; 77.2 1.9 6.4E-05 48.0 4.8 33 272-304 266-298 (488)
358 3iwa_A FAD-dependent pyridine 77.1 1.8 6.2E-05 48.0 4.7 35 272-306 160-195 (472)
359 3pdu_A 3-hydroxyisobutyrate de 77.0 1.6 5.4E-05 45.0 4.0 32 273-304 3-34 (287)
360 1vl6_A Malate oxidoreductase; 76.9 1.6 5.4E-05 47.1 3.9 35 270-304 191-226 (388)
361 1dlj_A UDP-glucose dehydrogena 76.7 1.6 5.6E-05 47.5 4.1 30 274-304 3-32 (402)
362 3h8v_A Ubiquitin-like modifier 76.6 1.7 5.8E-05 45.2 4.0 35 270-304 35-70 (292)
363 3r9u_A Thioredoxin reductase; 76.4 2.1 7.3E-05 44.0 4.8 35 272-306 148-182 (315)
364 2wtb_A MFP2, fatty acid multif 76.2 1.8 6E-05 51.1 4.5 32 273-304 314-345 (725)
365 1a5z_A L-lactate dehydrogenase 76.1 1.8 6E-05 45.7 4.1 31 274-304 3-35 (319)
366 1yqg_A Pyrroline-5-carboxylate 76.0 1.9 6.3E-05 43.7 4.1 31 274-304 3-34 (263)
367 1yj8_A Glycerol-3-phosphate de 75.7 1.5 5.1E-05 47.2 3.4 32 273-304 23-61 (375)
368 1t2d_A LDH-P, L-lactate dehydr 75.6 2.3 7.8E-05 44.9 4.8 32 273-304 6-38 (322)
369 2eez_A Alanine dehydrogenase; 75.6 2.1 7.3E-05 46.0 4.6 33 272-304 167-199 (369)
370 3gpi_A NAD-dependent epimerase 75.6 2.3 7.9E-05 43.4 4.7 32 273-304 5-36 (286)
371 1p77_A Shikimate 5-dehydrogena 75.6 1.7 5.7E-05 44.7 3.6 32 273-304 121-152 (272)
372 1vpd_A Tartronate semialdehyde 75.5 2.4 8E-05 43.9 4.8 32 273-304 7-38 (299)
373 2gf2_A Hibadh, 3-hydroxyisobut 75.4 2.5 8.5E-05 43.6 4.9 31 274-304 3-33 (296)
374 1guz_A Malate dehydrogenase; o 75.3 2.5 8.6E-05 44.3 5.0 31 274-304 3-35 (310)
375 3fbt_A Chorismate mutase and s 75.3 3.6 0.00012 42.5 6.0 33 272-304 123-156 (282)
376 3ew7_A LMO0794 protein; Q8Y8U8 75.2 2.6 8.8E-05 40.9 4.8 31 274-304 3-34 (221)
377 3ggo_A Prephenate dehydrogenas 75.1 2.4 8.1E-05 44.6 4.7 32 273-304 35-68 (314)
378 3tl2_A Malate dehydrogenase; c 75.1 2.4 8.3E-05 44.6 4.7 31 273-303 10-41 (315)
379 1hyh_A L-hicdh, L-2-hydroxyiso 75.1 1.9 6.6E-05 45.1 4.0 32 273-304 3-36 (309)
380 4huj_A Uncharacterized protein 75.0 1.4 4.8E-05 43.6 2.7 32 273-304 25-57 (220)
381 2uyy_A N-PAC protein; long-cha 75.0 3 0.0001 43.6 5.5 33 272-304 31-63 (316)
382 3c24_A Putative oxidoreductase 75.0 2.3 8E-05 43.7 4.6 32 273-304 13-45 (286)
383 3pid_A UDP-glucose 6-dehydroge 74.9 2.1 7.3E-05 47.0 4.4 31 273-304 38-68 (432)
384 3dfu_A Uncharacterized protein 74.9 1.1 3.9E-05 44.8 2.1 30 273-302 8-37 (232)
385 4ezb_A Uncharacterized conserv 74.9 2.2 7.4E-05 44.9 4.3 32 273-304 26-58 (317)
386 2egg_A AROE, shikimate 5-dehyd 74.9 2.4 8.1E-05 44.2 4.6 32 273-304 143-175 (297)
387 4a9w_A Monooxygenase; baeyer-v 74.8 2.2 7.4E-05 44.7 4.4 32 272-304 164-195 (357)
388 2aef_A Calcium-gated potassium 74.8 1.3 4.3E-05 44.2 2.4 32 272-304 10-41 (234)
389 2g5c_A Prephenate dehydrogenas 74.8 2.5 8.5E-05 43.3 4.7 31 274-304 4-36 (281)
390 1x0v_A GPD-C, GPDH-C, glycerol 74.7 1.5 5.1E-05 46.7 3.1 32 273-304 10-48 (354)
391 3p2y_A Alanine dehydrogenase/p 74.7 2 6.8E-05 46.3 4.0 33 272-304 185-217 (381)
392 1pjc_A Protein (L-alanine dehy 74.6 2.4 8.1E-05 45.5 4.6 33 272-304 168-200 (361)
393 3h2s_A Putative NADH-flavin re 74.3 2.6 9E-05 41.1 4.6 31 274-304 3-34 (224)
394 4gsl_A Ubiquitin-like modifier 74.0 2.6 8.8E-05 48.2 4.8 34 271-304 326-360 (615)
395 2vdc_G Glutamate synthase [NAD 74.0 2.5 8.6E-05 46.9 4.8 33 272-304 265-298 (456)
396 1x13_A NAD(P) transhydrogenase 74.0 2.6 8.7E-05 46.0 4.8 33 272-304 173-205 (401)
397 2o3j_A UDP-glucose 6-dehydroge 74.0 2.6 8.9E-05 47.1 4.9 32 273-304 11-44 (481)
398 1i36_A Conserved hypothetical 73.8 2.3 7.8E-05 43.1 4.1 29 274-302 3-31 (264)
399 1nvt_A Shikimate 5'-dehydrogen 73.8 2.2 7.4E-05 44.2 3.9 30 273-303 130-159 (287)
400 1cjc_A Protein (adrenodoxin re 73.7 2.6 9E-05 46.7 4.9 56 457-515 270-335 (460)
401 3cky_A 2-hydroxymethyl glutara 73.6 3 0.0001 43.1 5.0 32 273-304 6-37 (301)
402 2cvz_A Dehydrogenase, 3-hydrox 73.5 2.7 9.1E-05 43.1 4.6 30 274-304 4-33 (289)
403 3qsg_A NAD-binding phosphogluc 73.5 2.2 7.7E-05 44.6 4.0 31 273-303 26-57 (312)
404 1pgj_A 6PGDH, 6-PGDH, 6-phosph 73.5 2.5 8.6E-05 47.2 4.6 32 273-304 3-34 (478)
405 3vh1_A Ubiquitin-like modifier 73.4 2.6 8.9E-05 48.0 4.7 34 271-304 327-361 (598)
406 3e8x_A Putative NAD-dependent 73.4 2.8 9.6E-05 41.4 4.6 32 273-304 23-55 (236)
407 1hdo_A Biliverdin IX beta redu 73.4 2.8 9.7E-05 40.0 4.5 32 273-304 5-37 (206)
408 1leh_A Leucine dehydrogenase; 73.4 2.8 9.6E-05 45.0 4.8 30 273-302 175-204 (364)
409 2x5o_A UDP-N-acetylmuramoylala 73.3 1.8 6E-05 47.8 3.3 33 273-305 7-39 (439)
410 3zwc_A Peroxisomal bifunctiona 73.3 2.4 8.3E-05 49.9 4.6 32 273-304 318-349 (742)
411 1wdk_A Fatty oxidation complex 72.9 2.1 7.1E-05 50.4 3.9 32 273-304 316-347 (715)
412 3ius_A Uncharacterized conserv 72.7 2.5 8.7E-05 43.0 4.2 32 273-304 7-38 (286)
413 1lu9_A Methylene tetrahydromet 72.7 2.8 9.7E-05 43.2 4.5 31 273-303 121-152 (287)
414 3jyo_A Quinate/shikimate dehyd 72.6 3.1 0.00011 43.0 4.8 33 272-304 128-161 (283)
415 4e21_A 6-phosphogluconate dehy 72.4 3.1 0.00011 44.6 4.9 34 271-304 22-55 (358)
416 3ktd_A Prephenate dehydrogenas 72.4 2.9 0.0001 44.4 4.6 32 273-304 10-41 (341)
417 2vhw_A Alanine dehydrogenase; 72.3 2.9 9.8E-05 45.2 4.6 33 272-304 169-201 (377)
418 2zyd_A 6-phosphogluconate dehy 72.3 2.8 9.6E-05 46.8 4.7 34 271-304 15-48 (480)
419 3tnl_A Shikimate dehydrogenase 72.3 3 0.0001 43.8 4.6 32 272-303 155-187 (315)
420 3h5n_A MCCB protein; ubiquitin 72.1 2.5 8.4E-05 45.3 4.0 34 271-304 118-152 (353)
421 2pgd_A 6-phosphogluconate dehy 72.1 3 0.0001 46.6 4.9 32 273-304 4-35 (482)
422 2p4q_A 6-phosphogluconate dehy 72.0 3.2 0.00011 46.5 5.1 35 270-304 9-43 (497)
423 1ur5_A Malate dehydrogenase; o 71.9 3.2 0.00011 43.4 4.8 32 273-304 4-36 (309)
424 1o94_A Tmadh, trimethylamine d 71.8 2.6 8.9E-05 49.7 4.5 32 273-304 530-563 (729)
425 2hk9_A Shikimate dehydrogenase 71.5 2.8 9.4E-05 43.1 4.1 32 273-304 131-162 (275)
426 1l7d_A Nicotinamide nucleotide 71.4 3.2 0.00011 44.9 4.8 33 272-304 173-205 (384)
427 1y8q_A Ubiquitin-like 1 activa 71.3 2.6 8.9E-05 45.0 3.9 34 271-304 36-70 (346)
428 3u62_A Shikimate dehydrogenase 71.0 3.3 0.00011 42.0 4.5 32 273-304 110-142 (253)
429 3don_A Shikimate dehydrogenase 70.9 2.8 9.5E-05 43.2 3.9 33 272-304 118-151 (277)
430 1m6i_A Programmed cell death p 70.8 4.1 0.00014 45.5 5.6 33 273-305 182-218 (493)
431 3k31_A Enoyl-(acyl-carrier-pro 70.7 5.2 0.00018 41.3 6.0 31 273-303 32-65 (296)
432 3pwz_A Shikimate dehydrogenase 70.4 3.8 0.00013 42.1 4.8 32 272-303 121-153 (272)
433 2q3e_A UDP-glucose 6-dehydroge 70.2 3.2 0.00011 46.1 4.6 32 273-304 7-40 (467)
434 2dkn_A 3-alpha-hydroxysteroid 70.2 3.9 0.00013 40.6 4.8 31 274-304 4-35 (255)
435 3d4o_A Dipicolinate synthase s 70.2 3.6 0.00012 42.6 4.6 33 272-304 156-188 (293)
436 3o38_A Short chain dehydrogena 70.1 4.7 0.00016 40.6 5.5 32 273-304 24-57 (266)
437 2rcy_A Pyrroline carboxylate r 69.9 2.9 9.9E-05 42.2 3.8 32 273-304 6-41 (262)
438 1np3_A Ketol-acid reductoisome 69.4 4 0.00014 43.3 4.8 32 273-304 18-49 (338)
439 2rir_A Dipicolinate synthase, 69.4 3.8 0.00013 42.6 4.6 33 272-304 158-190 (300)
440 3r6d_A NAD-dependent epimerase 69.3 4 0.00014 39.8 4.6 31 274-304 8-40 (221)
441 1tt5_B Ubiquitin-activating en 68.9 3.5 0.00012 45.3 4.4 34 271-304 40-74 (434)
442 1vg0_A RAB proteins geranylger 68.9 5.8 0.0002 45.9 6.3 57 445-511 379-435 (650)
443 3dqp_A Oxidoreductase YLBE; al 68.9 3.5 0.00012 40.2 4.0 31 274-304 3-34 (219)
444 2d5c_A AROE, shikimate 5-dehyd 68.6 4.1 0.00014 41.3 4.6 32 273-304 118-149 (263)
445 1pjq_A CYSG, siroheme synthase 68.6 3.5 0.00012 45.7 4.4 31 273-303 14-44 (457)
446 3d1l_A Putative NADP oxidoredu 68.6 3.3 0.00011 41.9 3.9 32 273-304 12-44 (266)
447 3o8q_A Shikimate 5-dehydrogena 68.6 4 0.00014 42.1 4.5 33 272-304 127-160 (281)
448 2izz_A Pyrroline-5-carboxylate 68.5 3.9 0.00013 43.0 4.5 32 273-304 24-59 (322)
449 3gvi_A Malate dehydrogenase; N 68.5 4.2 0.00014 42.9 4.8 33 272-304 8-41 (324)
450 2iz1_A 6-phosphogluconate dehy 68.4 3.8 0.00013 45.7 4.6 33 272-304 6-38 (474)
451 3t4e_A Quinate/shikimate dehyd 67.9 4.3 0.00015 42.6 4.6 32 272-303 149-181 (312)
452 3eag_A UDP-N-acetylmuramate:L- 67.8 4.7 0.00016 42.4 5.0 32 273-304 6-38 (326)
453 1yb4_A Tartronic semialdehyde 67.8 3.1 0.0001 42.8 3.5 29 273-301 5-33 (295)
454 3vps_A TUNA, NAD-dependent epi 67.8 4.4 0.00015 41.7 4.8 33 273-305 9-42 (321)
455 4ffl_A PYLC; amino acid, biosy 67.7 5.7 0.00019 42.2 5.7 32 274-305 4-35 (363)
456 4gx0_A TRKA domain protein; me 67.5 4.1 0.00014 46.4 4.8 34 272-305 349-382 (565)
457 2i6t_A Ubiquitin-conjugating e 67.2 3.8 0.00013 42.8 4.0 33 272-304 15-49 (303)
458 2pd4_A Enoyl-[acyl-carrier-pro 67.2 4.9 0.00017 40.9 4.8 31 274-304 9-42 (275)
459 4gwg_A 6-phosphogluconate dehy 67.1 4.6 0.00016 45.1 4.9 33 272-304 5-37 (484)
460 3gt0_A Pyrroline-5-carboxylate 67.0 4.5 0.00015 40.5 4.5 32 273-304 4-39 (247)
461 1gte_A Dihydropyrimidine dehyd 66.7 4.3 0.00015 49.9 5.0 32 273-304 334-366 (1025)
462 3tum_A Shikimate dehydrogenase 66.5 8.1 0.00028 39.5 6.3 32 272-303 126-158 (269)
463 1oju_A MDH, malate dehydrogena 66.4 4 0.00014 42.4 4.0 31 274-304 3-35 (294)
464 1npy_A Hypothetical shikimate 66.4 4.9 0.00017 41.2 4.6 31 273-303 121-152 (271)
465 3pqe_A L-LDH, L-lactate dehydr 66.2 4.1 0.00014 43.0 4.1 31 273-303 7-39 (326)
466 4aj2_A L-lactate dehydrogenase 65.9 5.1 0.00018 42.3 4.8 32 272-303 20-53 (331)
467 3ce6_A Adenosylhomocysteinase; 65.8 4.8 0.00017 45.0 4.8 33 272-304 275-307 (494)
468 1edz_A 5,10-methylenetetrahydr 65.8 5.1 0.00017 42.1 4.7 33 271-303 177-210 (320)
469 1cyd_A Carbonyl reductase; sho 65.7 5.1 0.00017 39.6 4.5 30 274-303 10-40 (244)
470 3p7m_A Malate dehydrogenase; p 65.6 5.2 0.00018 42.1 4.8 32 273-304 7-39 (321)
471 3dhn_A NAD-dependent epimerase 65.4 4.3 0.00015 39.6 3.9 32 273-304 6-38 (227)
472 3ko8_A NAD-dependent epimerase 65.3 5.5 0.00019 40.9 4.9 31 274-304 3-34 (312)
473 2ahr_A Putative pyrroline carb 65.2 4.7 0.00016 40.6 4.2 32 273-304 5-36 (259)
474 2h7i_A Enoyl-[acyl-carrier-pro 65.2 4.9 0.00017 40.7 4.4 31 274-304 10-43 (269)
475 2z1m_A GDP-D-mannose dehydrata 65.2 5.6 0.00019 41.4 5.0 31 274-304 6-37 (345)
476 3ldh_A Lactate dehydrogenase; 65.1 4.4 0.00015 42.8 4.0 32 272-303 22-55 (330)
477 1ff9_A Saccharopine reductase; 65.1 4.7 0.00016 44.6 4.5 31 273-303 5-35 (450)
478 2dbq_A Glyoxylate reductase; D 65.1 5.8 0.0002 41.9 5.0 32 273-304 152-183 (334)
479 1w4x_A Phenylacetone monooxyge 65.0 4.2 0.00014 46.0 4.2 35 272-306 187-221 (542)
480 3gvp_A Adenosylhomocysteinase 65.0 5.3 0.00018 43.6 4.8 34 271-304 220-253 (435)
481 4id9_A Short-chain dehydrogena 64.9 5.3 0.00018 41.9 4.7 32 273-304 21-53 (347)
482 1c1d_A L-phenylalanine dehydro 64.8 5.3 0.00018 42.6 4.6 31 272-302 176-206 (355)
483 2ywl_A Thioredoxin reductase r 64.7 5.3 0.00018 37.5 4.2 59 449-524 60-119 (180)
484 2yjz_A Metalloreductase steap4 68.4 1.4 4.7E-05 43.2 0.0 32 273-304 21-52 (201)
485 3n74_A 3-ketoacyl-(acyl-carrie 64.5 5.7 0.00019 39.9 4.7 31 274-304 12-43 (261)
486 2dvm_A Malic enzyme, 439AA lon 64.5 4.4 0.00015 44.5 4.0 30 272-301 187-219 (439)
487 3d3w_A L-xylulose reductase; u 64.3 5.6 0.00019 39.4 4.5 30 274-303 10-40 (244)
488 1y6j_A L-lactate dehydrogenase 64.3 5.5 0.00019 41.8 4.6 33 272-304 8-42 (318)
489 3oig_A Enoyl-[acyl-carrier-pro 64.2 6.1 0.00021 39.8 4.9 30 274-303 10-42 (266)
490 2gag_A Heterotetrameric sarcos 63.9 3.2 0.00011 50.6 3.1 34 273-306 286-319 (965)
491 3nks_A Protoporphyrinogen oxid 63.8 2.1 7.3E-05 47.2 1.4 59 446-517 236-294 (477)
492 3tri_A Pyrroline-5-carboxylate 63.8 6 0.0002 40.6 4.7 32 273-304 5-39 (280)
493 1qsg_A Enoyl-[acyl-carrier-pro 63.7 5.5 0.00019 40.2 4.4 31 274-304 12-45 (265)
494 2r6j_A Eugenol synthase 1; phe 63.6 7 0.00024 40.4 5.3 31 274-304 14-45 (318)
495 4b4o_A Epimerase family protei 63.5 6.3 0.00021 40.4 4.9 31 274-304 3-34 (298)
496 4fs3_A Enoyl-[acyl-carrier-pro 63.3 6.3 0.00022 39.7 4.8 31 274-304 9-42 (256)
497 1y8q_B Anthracycline-, ubiquit 63.3 4.3 0.00015 46.8 3.8 34 271-304 17-51 (640)
498 2ydy_A Methionine adenosyltran 63.2 5.5 0.00019 41.1 4.4 31 274-304 5-36 (315)
499 1lqt_A FPRA; NADP+ derivative, 63.1 5.8 0.0002 43.8 4.8 52 459-515 266-328 (456)
500 2wyu_A Enoyl-[acyl carrier pro 62.8 5.1 0.00017 40.4 3.9 31 274-304 11-44 (261)
No 1
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=8e-65 Score=587.79 Aligned_cols=482 Identities=16% Similarity=0.155 Sum_probs=340.3
Q ss_pred cccEEEECCCchHHHHHHHHHh-CCCeEEEEcCCCCCCCCC---cc-----cccCCchhhhhhhCCccccCCCceeeeec
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAK-AGYKVLVLEKGSYCARSN---LS-----LLEGKTMDQMYLAGGMLATDDMGVILLAG 341 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~-~G~kVlVLEkG~~~~~~~---~~-----~~~~~~~~~~y~~~~~~~~~~~~~~~~~G 341 (781)
+|||||||||++||++|.+|++ .|++|||||+|+...... .| ....+.++|.|.+.+.....++.+.+.+|
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq~~~~~r~~~~~rG 81 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQAGYNGRSIAYPRG 81 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCCGGGTTCCCBCCCB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccCCCCCCceEeccCC
Confidence 5999999999999999999999 699999999998653221 11 11125577888888877788889999999
Q ss_pred ceecCcchhcccccccCChhhHHHHHHHhcCCCcChhhhhHHHHhhhhhcccc-----------------------CCCc
Q 003990 342 STVGGGSTINWSASIKTPKHVANEWCDEYELKLFESDLYKEAMEVVCERMGVQ-----------------------SEVE 398 (781)
Q Consensus 342 ~~lGGgs~in~~~~~r~~~~~~~~W~~~~gl~~~~~~~~~~~~~~v~~~l~v~-----------------------~~~~ 398 (781)
++|||+|++|+++|.|+.+.+|+.|++..|.+.|.++++.+++.+.+...... ....
T Consensus 82 k~lGGsS~iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~~~~~~~~~~~~~~~~~hG~~Gp~~v~~~~~ 161 (566)
T 3fim_B 82 RMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVSISLPGF 161 (566)
T ss_dssp CBTTGGGGTSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEECCCTTCCCCTTTSCGGGSCBSSSEEEBSCSS
T ss_pred cEEcCcccccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccCCccccccccccCCccccCCCCCeeeecCCC
Confidence 99999999999999999999999999877889999999999999877654211 0011
Q ss_pred cCCccHHHHHHHHHHc--CCCCCCCCCCCCCCCcceeccccCCCCcccchhhhchHHHhhCCCeEEecCcEEEEEEccCC
Q 003990 399 EEGFNNAVLRRGCKEL--GYPVNNIPRNSPPDHYCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKR 476 (781)
Q Consensus 399 ~~~~~~~~l~~~~~~l--G~~~~~~p~n~~~~~~~g~~~~gc~~g~k~s~~~~~L~~a~~~gn~~i~~~~~V~~I~~~~g 476 (781)
.......+.++++++ |++... ..|.....++++|...+..+.|.++..+||.++.+++|++|++++.|+||+++..
T Consensus 162 -~~~~~~~~~~a~~~~~~G~~~~~-d~n~~~~~G~~~~~~~~~~g~R~sa~~ayL~p~~~r~NL~Vlt~a~V~rIl~~~~ 239 (566)
T 3fim_B 162 -PTPLDDRVLATTQEQSEEFFFNP-DMGTGHPLGISWSIASVGNGQRSSSSTAYLRPAQSRPNLSVLINAQVTKLVNSGT 239 (566)
T ss_dssp -CCTHHHHHHHHHHHTHHHHCBCS-CGGGSCCCEEEECCBSEETTEECCHHHHTHHHHTTCTTEEEESSCEEEEEECCEE
T ss_pred -CCHHHHHHHHHHHHHhcCCCccC-CCCCCCcceEEeeeeecCCCEEcCHHHHHhhhhccCCCeEEECCCEEEEEEeecC
Confidence 112346788999999 988754 3465666788888888888999999999999999999999999999999999810
Q ss_pred -CCcceEEEEEEEEeeCCce-eEEEEec-cEEEEeccCCCCHHHHHHcCCCC---------------Ccccccccccccc
Q 003990 477 -RDRNVATGVAFEFQYMGAK-DICVVES-KVTIVACGALSTPNLLKRSGLKN---------------ANIGKNLHLHPVT 538 (781)
Q Consensus 477 -g~~~ra~GV~~~~~~~g~g-~~~~i~A-k~VVLAaGai~Tp~LLl~SGi~~---------------p~VG~nL~dHp~~ 538 (781)
++.++|+||++.. ..+ +..+|+| |+||||||+|+||+|||+|||++ |.||+||+||+.+
T Consensus 240 ~~g~~rA~GVe~~~---~~g~~~~~v~A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI~vv~dlPgVG~NLqDH~~~ 316 (566)
T 3fim_B 240 TNGLPAFRCVEYAE---QEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGRNLSDHLLL 316 (566)
T ss_dssp ETTEEECCEEEEES---STTSCCEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEEE
T ss_pred CCCCCEEEEEEEEE---CCCceEEEEEeeeEEEEecCCcCChHHHHhcCCCChHHHhhcCCCceecCcchhhhhhcCccc
Confidence 0124899999985 223 5678999 89999999999999999999974 7899999999987
Q ss_pred eeeccccCCCCCC---CCcc-c-----cccCCCCCceeeecccccCcCCCC-----CCceec--CCCCCccchhccCCCC
Q 003990 539 MAWGYFPKTSSSG---EWPE-E-----KKTSYEGGIMTAMSTTVGNFGKSG-----YGAVIQ--TPALHPGMFSSLMPWV 602 (781)
Q Consensus 539 ~~~~~~~~~~~~~---~~~~-~-----~~~~~~gg~~ts~~~~~~~~~~~~-----~~~~le--~~~~~p~~~~~~~p~~ 602 (781)
.+....+...... .... . .......|++++.......|-... +....+ .....|.....+.+..
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~pd~~~~~~~~~ 396 (566)
T 3fim_B 317 PAAFFVNSNQTFDNIFRDSSEFNVDLDQWTNTRTGPLTALIANHLAWLRLPSNSSIFQTFPDPAAGPNSAHWETIFSNQW 396 (566)
T ss_dssp CCEEEESCSCSSGGGGTCHHHHHHHHHHHHHHSCSGGGCCSCSEEEEECCCTTCGGGGTSCCCSSSTTSCSEEEEEESSC
T ss_pred eEEEEeCCCcccchhhcChHHHHHHHHHHHhcCCCCcccChhhheeeeccccchhhhhhhccccccCCCCCEEEEecccc
Confidence 5422222211100 0000 0 000012344332111000000000 000000 0001111111111100
Q ss_pred cchhHHHHHhhcCCceEEEEEeecCCCceEecC-------cc--ccCCCChhhHHHHHHHHHHHHHHHHHcCcccccc-c
Q 003990 603 SGADIKLRMCKFSRTAHIFVLARDQGSGTVNSP-------YS--ISYQMEAMDEENLKKGIEKILRILAAAGAEEIGT-H 672 (781)
Q Consensus 603 ~g~~~~~~~~~~~~~~~~~~l~~d~s~G~V~~~-------p~--i~y~~~~~D~~~l~~~~~~~~~i~~~~ga~~i~~-~ 672 (781)
....+. .............+++|.|+|+|+++ |. ++|+.++.|++.++++++.+++|+.+.+++.+.. +
T Consensus 397 ~~~~~~-~~~~~~~~~~~~~l~~P~SrG~V~L~s~dp~~~P~i~~~yl~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~ 475 (566)
T 3fim_B 397 FHPAIP-RPDTGSFMSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTMIQAVKSNLRFLSGQAWADFVIRP 475 (566)
T ss_dssp CCTTSC-CCSSCCEEEEEEEESSCSCCBEEECSSSCTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTSGGGTTTEEEE
T ss_pred hhhccc-CCCCCCEEEEEEeecCCccceEEEecCCCCCCCceeccccCCCccHHHHHHHHHHHHHHHHhCcccCCccccc
Confidence 000000 00000112344567899999999874 33 4888999999999999999999998777766432 2
Q ss_pred ccCCccccccCCCHHHHHHHHHhhccCCCCCCCCCccccccccCccCCCCCCC-ccccCCCceeccCCcEEecCCcCCCC
Q 003990 673 HCKGKIINVKKASSEEFERFVKEESSRPLRDLSTPLSSAHQMGSCRMGIDPKT-SVVNQMGETWGVEGLYLADTSVFPTA 751 (781)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~H~~GTcrMG~~~~~-gVVD~~~rv~g~~nL~V~DaSvfPt~ 751 (781)
..++. ....+|+++++|+++.. .+.+|++||||||++++. ||||+++||||++||||+||||||+.
T Consensus 476 ~~P~~---~~~~sd~~~~~~ir~~~----------~t~~H~~GTc~Mg~~~~~~~VVD~~lrV~Gv~~LrVvDaSv~P~~ 542 (566)
T 3fim_B 476 FDPRL---RDPTDDAAIESYIRDNA----------NTIFHPVGTASMSPRGASWGVVDPDLKVKGVDGLRIVDGSILPFA 542 (566)
T ss_dssp SSGGG---SCTTCHHHHHHHHHHHC----------EECSCCBCTTCBCCTTCSSCSBCTTCBBTTCBSEEECSGGGCCSC
T ss_pred cCCCc---ccccchHHHHHHHhhcc----------cccccccCccccCCcccCCccCCCCCeEccCCCcEEcccccCCCC
Confidence 22320 12358999999999853 688999999999999887 99999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHH
Q 003990 752 LGVNPMVTVQAIAYCTAQSV 771 (781)
Q Consensus 752 ~g~NP~lTi~AlA~~iA~~i 771 (781)
+++||++|+||+|+++|+.|
T Consensus 543 ~~~n~~~~~~~iaekaAd~I 562 (566)
T 3fim_B 543 PNAHTQGPIYLVGKQGADLI 562 (566)
T ss_dssp CSSCTHHHHHHHHHHHHHHH
T ss_pred CCcCcHHHHHHHHHHHHHHH
Confidence 99999998888765555544
No 2
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=2.9e-63 Score=575.02 Aligned_cols=459 Identities=21% Similarity=0.283 Sum_probs=334.0
Q ss_pred CCcccEEEECCCchHHHHHHHHHh-CCCeEEEEcCCCCCCCCC------cccccCCchhhhhhhCCccccCCCceeeeec
Q 003990 269 VIKCDAVVVGSGSGGGLIAGVLAK-AGYKVLVLEKGSYCARSN------LSLLEGKTMDQMYLAGGMLATDDMGVILLAG 341 (781)
Q Consensus 269 ~~~~DVIVVGsG~~G~vaA~~LA~-~G~kVlVLEkG~~~~~~~------~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~G 341 (781)
..+|||||||||++||++|.+||+ .|+||||||+|+...... ++....+.++|.|.+.+.....++.+.+.+|
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~~~~~~~~p~~~~~~~~~~~dw~~~t~p~~~~~~~~~~~~rG 94 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEPTDPDIWNPAAWPALQGRSYDWDYRTEAQAGTAGRAHHWARG 94 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCCCCGGGGSGGGGGGTTTSTTBCCEECCCBGGGTTBCCEECCB
T ss_pred CCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCCCCcchhChhhHhhccCCccccCccccccCCCCCCeEeccCc
Confidence 358999999999999999999998 589999999998643322 2334455677888887777778888999999
Q ss_pred ceecCcchhcccccccCChhhHHHHHHHhcCCCcChhhhhHHHHhhhhhccccCCC-------------ccCCccHHHHH
Q 003990 342 STVGGGSTINWSASIKTPKHVANEWCDEYELKLFESDLYKEAMEVVCERMGVQSEV-------------EEEGFNNAVLR 408 (781)
Q Consensus 342 ~~lGGgs~in~~~~~r~~~~~~~~W~~~~gl~~~~~~~~~~~~~~v~~~l~v~~~~-------------~~~~~~~~~l~ 408 (781)
++|||+|.+|+++++|+.+.+|+.|.+..+.+.|.++++.+++++.+......... .......+.+.
T Consensus 95 ~~lGGsS~in~~~~~R~~~~Dfd~w~~~~~~~~w~~~~~~pyf~~~E~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~~~ 174 (526)
T 3t37_A 95 RLIGGSSCLHAMGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAIEDHPLGGDGIHGKGGPLPIHLPADEVSPLARAFI 174 (526)
T ss_dssp CBTTGGGGTSCCBCCCCCHHHHHHHHHHHSCGGGSHHHHHHHHHHHEECTTTTSSSSCSSCSEECBCCSTTSCHHHHHHH
T ss_pred cEECcHHHHhhCEEecCCHHHHHHHHHhcCCCCCChhhhhhhhhhhhhccCCCccccCcCCCcCcccccccCCHHHHHHH
Confidence 99999999999999999999999998877888899999999999887655432211 11122346788
Q ss_pred HHHHHcCCCCCCCCCCCCCCCcceeccccCCCCcccchhhhchHHH-hhCCCeEEecCcEEEEEEccCCCCcceEEEEEE
Q 003990 409 RGCKELGYPVNNIPRNSPPDHYCGWCCLGCKDGSKKGTSETWLVDL-VNSGNSAILPGCEAIEVLHKKRRDRNVATGVAF 487 (781)
Q Consensus 409 ~~~~~lG~~~~~~p~n~~~~~~~g~~~~gc~~g~k~s~~~~~L~~a-~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~ 487 (781)
++++++|++....+ +...+..++.|...|..+.+.+...+++..+ ..++|++|++++.|++|+++++ +++||++
T Consensus 175 ~~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~g~r~s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~~~----~a~gv~~ 249 (526)
T 3t37_A 175 EAGASLGLPRLEGH-NSGEMIGVTPNSLNIRDGRRVTAADAWLTKAVRGRKNLTILTGSRVRRLKLEGN----QVRSLEV 249 (526)
T ss_dssp HHHHHTTCCBCSSS-CSSCCBSBCCCCBCEETTEECCHHHHHSCHHHHTCTTEEEECSCEEEEEEEETT----EEEEEEE
T ss_pred HHHHHcCCCcccCC-CCCcccccccccccccCCcccccccccccccccCCCCeEEEeCCEEEEEEecCC----eEEEEEE
Confidence 99999999876643 4455667778888888898988888877554 5678999999999999999876 9999999
Q ss_pred EEeeCCceeEEEEeccEEEEeccCCCCHHHHHHcCCCC---------------CcccccccccccceeeccccCCCCCCC
Q 003990 488 EFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKN---------------ANIGKNLHLHPVTMAWGYFPKTSSSGE 552 (781)
Q Consensus 488 ~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~SGi~~---------------p~VG~nL~dHp~~~~~~~~~~~~~~~~ 552 (781)
.. .+....+.||+||||||+|+||+|||+|||++ |.||+||+||+......+......
T Consensus 250 ~~----~~~~~~~~a~~VILsAGai~SP~LLl~SGig~~~~l~~~gi~vv~dlp~VG~nl~DH~~~~~~~~~~~~~~--- 322 (526)
T 3t37_A 250 VG----RQGSAEVFADQIVLCAGALESPALLMRSGIGPHDVLDAAGVGCLIDMPDIGRNLQDHLLGAGNLYAARKPV--- 322 (526)
T ss_dssp EE----TTEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHHHTCCCSEECTTTTCSBBCCEEEEEEEEEESSCC---
T ss_pred Ee----cCceEEEeecceEEcccccCCcchhhhccCCchhhhhccCCCeEecCCccccccccccccceeEEeccCCc---
Confidence 86 23567888999999999999999999999863 679999999997654322211110
Q ss_pred CccccccCCCCCceeeeccccc-CcCCCCC-CceecCCCCCccchhccCCCCcchhHHHHHhhcCCceEEEEEeecCCCc
Q 003990 553 WPEEKKTSYEGGIMTAMSTTVG-NFGKSGY-GAVIQTPALHPGMFSSLMPWVSGADIKLRMCKFSRTAHIFVLARDQGSG 630 (781)
Q Consensus 553 ~~~~~~~~~~gg~~ts~~~~~~-~~~~~~~-~~~le~~~~~p~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~l~~d~s~G 630 (781)
................ .+...+. ...+. ....|.... .+. ..........++.+.+|.|+|
T Consensus 323 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~-~~~-~~~~~~~~~~~~~l~~p~srG 385 (526)
T 3t37_A 323 ------PPSRLQHSESMAYMRADSFTAAGQPEIVVG---------CGVAPIVSE-SFP-APAAGSAYSLLFGITHPTSRG 385 (526)
T ss_dssp ------CCCSSCSEEEEEEECSSCSSCCSSCCEEEE---------EESSCCCCT-TSC-CCCTTSEEEEEEEESSCCCCB
T ss_pred ------chHhhcchhhhhhhhcccccccCCcceeee---------ccccccccc-ccc-cccCCcceeeeccccCccccC
Confidence 0000000000000000 0000000 00000 001111000 000 000011123445678999999
Q ss_pred eEecC-------ccc--cCCCChhhHHHHHHHHHHHHHHHHHcCccccc-ccccCCccccccCCCHHHHHHHHHhhccCC
Q 003990 631 TVNSP-------YSI--SYQMEAMDEENLKKGIEKILRILAAAGAEEIG-THHCKGKIINVKKASSEEFERFVKEESSRP 700 (781)
Q Consensus 631 ~V~~~-------p~i--~y~~~~~D~~~l~~~~~~~~~i~~~~ga~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (781)
+|++. |.| +|..++.|++.++++++.+++|+.+.....+. .+..++. ..+++++++|+++..
T Consensus 386 ~v~~~s~dp~~~p~i~~~~~~~~~d~~~~~~~~~~~r~i~~~~~~~~~~~~~~~pg~-----~~~~~~~~~~ir~~~--- 457 (526)
T 3t37_A 386 SVRISGPELGDRLIIDPAYLQTGRDRERFRRALEASRTIGHRDELAGWRERELLPGT-----PNSAAEMDDFIARSV--- 457 (526)
T ss_dssp EEECSSSSTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTCGGGTTTEEEECSSCC-----CCSHHHHHHHHHHHE---
T ss_pred cceeccCCCccCceeccccCCCHHHHHHHHHHHHHHHHHHcChhhhhccccccCCCC-----CCCHHHHHHHHHhcC---
Confidence 99754 334 78899999999999999999998766554432 2222322 247899999999853
Q ss_pred CCCCCCCccccccccCccCCCCCCCccccCCCceeccCCcEEecCCcCCCCCCCCChhHHHHHHHHHHHHHH
Q 003990 701 LRDLSTPLSSAHQMGSCRMGIDPKTSVVNQMGETWGVEGLYLADTSVFPTALGVNPMVTVQAIAYCTAQSVL 772 (781)
Q Consensus 701 ~~~~~~~~~s~H~~GTcrMG~~~~~gVVD~~~rv~g~~nL~V~DaSvfPt~~g~NP~lTi~AlA~~iA~~ia 772 (781)
.+.+|+|||||||+|| +||||++|||||++|||||||||||+++++||++||||||+++||+--
T Consensus 458 -------~t~~H~~GTcrMG~d~-~sVVD~~~rV~Gv~nL~VvDaSv~P~~~~~np~~ti~aiAEkaAd~~~ 521 (526)
T 3t37_A 458 -------ITHHHPCGTCRMGKDP-DAVVDANLRLKALDNLFVVDASIMPNLTAGPIHAAVLAIAETFARQYH 521 (526)
T ss_dssp -------EECSCCBCTTCBCSST-TCSBCTTCBBTTCSSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHH
T ss_pred -------ccCcccCccccCCCCC-CccCCCCCEEcCCCCeEEEEcCcccCCcChHHHHHHHHHHHHHHHHhh
Confidence 6788999999999988 799999999999999999999999999999999999998887777653
No 3
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=6.8e-63 Score=572.43 Aligned_cols=476 Identities=17% Similarity=0.189 Sum_probs=329.3
Q ss_pred CCcccEEEECCCchHHHHHHHHHhC-CCeEEEEcCCCCCCC-C-------CcccccCCchhhhhhhCCccccCCCceeee
Q 003990 269 VIKCDAVVVGSGSGGGLIAGVLAKA-GYKVLVLEKGSYCAR-S-------NLSLLEGKTMDQMYLAGGMLATDDMGVILL 339 (781)
Q Consensus 269 ~~~~DVIVVGsG~~G~vaA~~LA~~-G~kVlVLEkG~~~~~-~-------~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 339 (781)
..+|||||||||.+||++|.+|++. |++|||||+|++... . .+.....+.++|.|.+.+. ...++.+.+.
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~~q-~~~~r~~~~~ 95 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYETVEL-ATNNQTALIR 95 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSCCCTTSCHHHHBGGGTTTTTTSTTBCCEECCCC-TTTSCCCEEC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCcceechhhHHhhcCCcccCCcccccc-CCCCCeeecc
Confidence 3579999999999999999999985 899999999984322 1 1122224457788877654 3567788999
Q ss_pred ecceecCcchhcccccccCChhhHHHHHHHhcCC-CcChhhhhHHHHhhhhhcc------------------------cc
Q 003990 340 AGSTVGGGSTINWSASIKTPKHVANEWCDEYELK-LFESDLYKEAMEVVCERMG------------------------VQ 394 (781)
Q Consensus 340 ~G~~lGGgs~in~~~~~r~~~~~~~~W~~~~gl~-~~~~~~~~~~~~~v~~~l~------------------------v~ 394 (781)
+|++|||+|++|+|+|.|+.+.+|+.|++. +.+ .|.++++.+++++.+.... ++
T Consensus 96 rGk~LGGsS~iN~m~y~Rg~~~Dyd~W~~~-g~~~gW~~~~~lpyf~k~E~~~~~~~~~~~~~~~~~~~~hG~~Gpl~v~ 174 (583)
T 3qvp_A 96 SGNGLGGSTLVNGGTWTRPHKAQVDSWETV-FGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTVHAG 174 (583)
T ss_dssp CBCSTTGGGGTSCCBCCCCCHHHHHHHHHT-SCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCGGGSCSSSSEEEB
T ss_pred CceecCCcCcccceEEEeCCHHHHHHHHHh-CCCCCCChhHHHHHHHHHHhccCCcchhhcccccCCccccCCCCCEEec
Confidence 999999999999999999999999999865 555 8999999999988765421 11
Q ss_pred CC--CccCCccHHHHHHHHHHcCCCCCCCCCCCCCCCcceeccccC-CCCcccchhhhchHHHhhCCCeEEecCcEEEEE
Q 003990 395 SE--VEEEGFNNAVLRRGCKELGYPVNNIPRNSPPDHYCGWCCLGC-KDGSKKGTSETWLVDLVNSGNSAILPGCEAIEV 471 (781)
Q Consensus 395 ~~--~~~~~~~~~~l~~~~~~lG~~~~~~p~n~~~~~~~g~~~~gc-~~g~k~s~~~~~L~~a~~~gn~~i~~~~~V~~I 471 (781)
.. ........+.+.++++++|++... ..|.....+++++.... +.+.|.++..+||.++++++|++|++++.|+||
T Consensus 175 ~~~~~~~~~~~~~~~~~a~~~~G~~~~~-D~n~~~~~G~~~~~~t~~~~g~R~saa~ayL~p~~~r~NL~V~t~a~V~rI 253 (583)
T 3qvp_A 175 PRDTGDDYSPIVKALMSAVEDRGVPTKK-DFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQYVGKV 253 (583)
T ss_dssp CCCCSSCBCTHHHHHHHHHHTTTCCBCC-CTTSSCCCEEECCCBSBCTTCBBCCHHHHHTTTTTTCTTEEEECSCEEEEE
T ss_pred CCCCcccCCHHHHHHHHHHHHcCCCcCC-CCCCCCCceecccceeEcCCCcEecHHHHHHHHhhcCCCcEEEcCCEEEEE
Confidence 11 001122346788899999998754 34655566666665443 467888888899998888999999999999999
Q ss_pred EccCCCCcceEEEEEEEEeeCCceeEEEEec-cEEEEeccCCCCHHHHHHcCCCC---------------Cccccccccc
Q 003990 472 LHKKRRDRNVATGVAFEFQYMGAKDICVVES-KVTIVACGALSTPNLLKRSGLKN---------------ANIGKNLHLH 535 (781)
Q Consensus 472 ~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~A-k~VVLAaGai~Tp~LLl~SGi~~---------------p~VG~nL~dH 535 (781)
++++.+.+++|+||++.. ..++..+|+| |+||||||+|+||+|||+|||++ | ||+||+||
T Consensus 254 l~d~~~~~~ra~GV~~~~---~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGIGp~~~L~~~GI~vv~dLP-VG~NLqDH 329 (583)
T 3qvp_A 254 LLSQNGTTPRAVGVEFGT---HKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLP-VGLNLQDQ 329 (583)
T ss_dssp EEECSSSSCEEEEEEEES---STTCEEEEEEEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCC-TTCCBBCC
T ss_pred EeccCCCCCEEEEEEEEe---cCCcEEEEEECCEEEEeCCccCCHHHHHHcCCCCHHHHHhCCCCceeeCc-cccchhhC
Confidence 998422234999999973 1346788999 68999999999999999999974 7 99999999
Q ss_pred ccceeeccccCCCCCCCCccccccCCCCCceeeecccccCcCCC---CCCceecCCCCCccc--hhccCCCCcchhH---
Q 003990 536 PVTMAWGYFPKTSSSGEWPEEKKTSYEGGIMTAMSTTVGNFGKS---GYGAVIQTPALHPGM--FSSLMPWVSGADI--- 607 (781)
Q Consensus 536 p~~~~~~~~~~~~~~~~~~~~~~~~~~gg~~ts~~~~~~~~~~~---~~~~~le~~~~~p~~--~~~~~p~~~g~~~--- 607 (781)
+.+.+......... .. .....+......+... ...+.... ..+.. ......+....++
T Consensus 330 ~~~~~~~~~~~~~~----------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 395 (583)
T 3qvp_A 330 TTATVRSRITSAGA----------GQ--GQAAWFATFNETFGDYSEKAHELLNTK--LEQWAEEAVARGGFHNTTALLIQ 395 (583)
T ss_dssp EEEEEEEEECGGGC----------SB--CEEEEEEEHHHHHGGGHHHHHHHHHHC--HHHHHHHHHHTTSCSCHHHHHHH
T ss_pred ccceEEEEecCCcc----------cc--ccccccccHHHhhccchHHHHHHHHhh--cchhhcccccccCccccHHHHhh
Confidence 98765322221100 00 0000000000000000 00000000 00000 0000000000000
Q ss_pred ----HHHHhh-----------cC-CceEEEEEeecCCCceEecC-------ccc---cCCCChhhHHHHHHHHHHHHHHH
Q 003990 608 ----KLRMCK-----------FS-RTAHIFVLARDQGSGTVNSP-------YSI---SYQMEAMDEENLKKGIEKILRIL 661 (781)
Q Consensus 608 ----~~~~~~-----------~~-~~~~~~~l~~d~s~G~V~~~-------p~i---~y~~~~~D~~~l~~~~~~~~~i~ 661 (781)
.+.+.. +. .....+.+++|.|+|+|+++ |.| +|+.++.|++.++++++.+++|+
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~SrG~v~l~s~dp~~~P~i~~~~yl~~~~D~~~~~~~~~~~~~i~ 475 (583)
T 3qvp_A 396 YENYRDWIVNHNVAYSELFLDTAGVASFDVWDLLPFTRGYVHILDKDPYLHHFAYDPQYFLNELDLLGQAAATQLARNIS 475 (583)
T ss_dssp HHHHHHHHHHSCCEEEEEEEECTTSEEEEEEESSCCCCBEEEESSSCGGGCCEEEECCTTCSHHHHHHHHHHHHHHHHHH
T ss_pred hccchhhhccCCCCcceeeeccCCCceeeeeecccCCceEEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 000000 01 11122345799999999864 444 89999999999999999999999
Q ss_pred HHcCccccc-ccccCCccccccCCCHHHHHHHHHhhccCCCCCCCCCccccccccCccCCCCCCCccccCCCceeccCCc
Q 003990 662 AAAGAEEIG-THHCKGKIINVKKASSEEFERFVKEESSRPLRDLSTPLSSAHQMGSCRMGIDPKTSVVNQMGETWGVEGL 740 (781)
Q Consensus 662 ~~~ga~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~H~~GTcrMG~~~~~gVVD~~~rv~g~~nL 740 (781)
.+.+.+.+. .+..++... ....+|+++++|+++. ..+.+|++||||||+++++||||+++||||++||
T Consensus 476 ~~~~~~~~~~~~~~pg~~~-~~~~sd~~~~~~~r~~----------~~t~~H~~GTc~Mg~~~~~~VVD~~lrV~Gv~~L 544 (583)
T 3qvp_A 476 NSGAMQTYFAGETIPGDNL-AYDADLSAWTEYIPYH----------FRPNYHGVGTCSMMPKEMGGVVDNAARVYGVQGL 544 (583)
T ss_dssp TSTTHHHHEEEEEESGGGS-CTTCCHHHHHHHGGGS----------CEECSCCBCTTCBSCGGGTCSBCTTCBBTTCBSE
T ss_pred hCcchhhccccccCCCccc-ccCCCHHHHHHHHHhc----------cCCCcCCCCceeCCCCCCCceECCCCeEecCCCe
Confidence 776665442 222233211 1125899999999974 3688999999999998889999999999999999
Q ss_pred EEecCCcCCCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 003990 741 YLADTSVFPTALGVNPMVTVQAIAYCTAQSVLDVLR 776 (781)
Q Consensus 741 ~V~DaSvfPt~~g~NP~lTi~AlA~~iA~~ia~~l~ 776 (781)
||+||||||+.+++||++|++|+|+++|+.|.+...
T Consensus 545 rVvDaSv~P~~~~~n~~~t~~aiaeraAd~I~~~~~ 580 (583)
T 3qvp_A 545 RVIDGSIPPTQMSSHVMTVFYAMALKISDAILEDYA 580 (583)
T ss_dssp EECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeecccCCCCCCcCcHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999988777777765543
No 4
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=7.8e-62 Score=567.89 Aligned_cols=475 Identities=19% Similarity=0.195 Sum_probs=340.4
Q ss_pred CcccEEEECCCchHHHHHHHHHh-CCCeEEEEcCCCCCCCCC----cc----cccCCchhhhhhhCCccccCCCceeeee
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAK-AGYKVLVLEKGSYCARSN----LS----LLEGKTMDQMYLAGGMLATDDMGVILLA 340 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~-~G~kVlVLEkG~~~~~~~----~~----~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 340 (781)
.+|||||||+|.+|+++|.+|++ .|++|+|||+|....... .+ ....+.+.|.|.+.+ ...++.+.+.+
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~p--~~~~~~~~~~r 100 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQNYLTVP--LINNRTNNIKA 100 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTSTTBCCEECCC--CTTSCCCEECC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCccCCCcccccChhhHhhccCCcccccccccc--CCCCceeeeec
Confidence 57999999999999999999999 799999999998654221 11 111233455555443 34567788999
Q ss_pred cceecCcchhcccccccCChhhHHHHHHHhcCCCcChhhhhHHHHhhhhhccccC---------CC--------------
Q 003990 341 GSTVGGGSTINWSASIKTPKHVANEWCDEYELKLFESDLYKEAMEVVCERMGVQS---------EV-------------- 397 (781)
Q Consensus 341 G~~lGGgs~in~~~~~r~~~~~~~~W~~~~gl~~~~~~~~~~~~~~v~~~l~v~~---------~~-------------- 397 (781)
|++|||+|.+|+++++|+.+.+|+.|...+|.+.|.++++.++|++.+..+++.. ..
T Consensus 101 Gk~lGGsS~in~~~~~R~~~~D~d~W~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~G~~~~~~~~g~~Gpl~v~~~ 180 (587)
T 1gpe_A 101 GKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQSGAR 180 (587)
T ss_dssp BCSTTGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHHTCCCCGGGCCBSSSEEEBCC
T ss_pred cccccccccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcccCCcccccccccccCccccCCCCCEEEccC
Confidence 9999999999999999999999999986558888999999999999987776410 00
Q ss_pred ---ccCCccHHHHHHHHHHcCCCCCCCCCCCCCCCcceecccc-CCCCcccchhhhchHHHhhCCCeEEecCcEEEEEEc
Q 003990 398 ---EEEGFNNAVLRRGCKELGYPVNNIPRNSPPDHYCGWCCLG-CKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLH 473 (781)
Q Consensus 398 ---~~~~~~~~~l~~~~~~lG~~~~~~p~n~~~~~~~g~~~~g-c~~g~k~s~~~~~L~~a~~~gn~~i~~~~~V~~I~~ 473 (781)
.......+.+.++++++|++.... .|...+.+|++|... |..+.|.++..+||.++.+++|++|++++.|++|++
T Consensus 181 ~~~~~~~~~~~~~~~a~~~~G~~~~~d-~n~~~~~G~~~~~~~~~~~g~R~sa~~~~l~~~~~~~nl~i~~~~~v~~l~~ 259 (587)
T 1gpe_A 181 DNGQPWSPIMKALMNTVSALGVPVQQD-FLCGHPRGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQMVGKVLF 259 (587)
T ss_dssp CCSSCBCTHHHHHHHHHHHTTCCBSCC-TTSSCCCEEECCEESBCTTCCBCCHHHHHTTTTTTCTTEEEEESCEEEEEEE
T ss_pred CCcCCCCHHHHHHHHHHHHcCCCcCCC-CCCCCCCEEEecceEECCCCcccCHHHHHHHHhhcCCCcEEEcCCEEEEEEE
Confidence 011233578899999999987653 455566677777653 457899999999998777788899999999999998
Q ss_pred cCCCCcceEEEEEEEEeeCCceeEEEEec-cEEEEeccCCCCHHHHHHcCCCC---------------Cccccccccccc
Q 003990 474 KKRRDRNVATGVAFEFQYMGAKDICVVES-KVTIVACGALSTPNLLKRSGLKN---------------ANIGKNLHLHPV 537 (781)
Q Consensus 474 ~~gg~~~ra~GV~~~~~~~g~g~~~~i~A-k~VVLAaGai~Tp~LLl~SGi~~---------------p~VG~nL~dHp~ 537 (781)
++++++.+|+||++.+. .++..+|+| |+||||||+|+||+||++|||++ | ||+||+||+.
T Consensus 260 ~~~~~~~~~~GV~~~~~---~g~~~~v~A~k~VILaaG~~~sp~lL~~SGIGp~~~L~~~gI~vv~dlP-VG~nL~DH~~ 335 (587)
T 1gpe_A 260 KQTASGPQAVGVNFGTN---KAVNFDVFAKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLP-VGINMQDQTT 335 (587)
T ss_dssp EEETTEEEEEEEEEEEE---TTEEEEEEEEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCCSEECC-TTCSBBCCEE
T ss_pred CCCCCCCEEEEEEEEeC---CCcEEEEEecccEEEccCCCCCHHHHHhCCCCCHHHHHhCCCCeEEeCC-CCcchhcCcc
Confidence 75322248999999852 346778999 99999999999999999999986 6 9999999999
Q ss_pred ceeeccccCCCCCCCCccccccCCCCCc-eeeecccccCcCCCCCCceecCCCCCccchhcc------CCCCc--chhHH
Q 003990 538 TMAWGYFPKTSSSGEWPEEKKTSYEGGI-MTAMSTTVGNFGKSGYGAVIQTPALHPGMFSSL------MPWVS--GADIK 608 (781)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~~~~gg~-~ts~~~~~~~~~~~~~~~~le~~~~~p~~~~~~------~p~~~--g~~~~ 608 (781)
..+...+++... .+.... +......+.. ... +. +.........+... .+... ..+++
T Consensus 336 ~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~-~~~--G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (587)
T 1gpe_A 336 TTVSSRASSAGA----------GQGQAVFFANFTETFGD-YAP--QA-RDLLNTKLDQWAEETVARGGFHNVTALKVQYE 401 (587)
T ss_dssp EEEEEEECGGGC----------SBCEEEEEEEHHHHHGG-GHH--HH-HHHHHHSHHHHHHHHHHTTSCSCHHHHHHHHH
T ss_pred cceEEEeCCCcc----------cccchHHHHHHHHHHHh-CCC--CC-ccccccceeeEeecccccccccccccccccHH
Confidence 877555443210 000000 0000000000 000 00 00000000000000 00000 01111
Q ss_pred HHHhh-----c----------CCceEEEEEeecCCCceEecC-------c-cc--cCCCChhhHHHHHHHHHHHHHHHHH
Q 003990 609 LRMCK-----F----------SRTAHIFVLARDQGSGTVNSP-------Y-SI--SYQMEAMDEENLKKGIEKILRILAA 663 (781)
Q Consensus 609 ~~~~~-----~----------~~~~~~~~l~~d~s~G~V~~~-------p-~i--~y~~~~~D~~~l~~~~~~~~~i~~~ 663 (781)
..+.. + ......+.+++|.++|+|+++ | .| +|..++.|++.++++++.+++|+.+
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~~i~~~y~~~~~D~~~~~~~~~~~~~i~~~ 481 (587)
T 1gpe_A 402 NYRNWLLDEDVAFAELFMDTEGKINFDLWDLIPFTRGSVHILSSDPYLWQFANDPKFFLNEFDLLGQAAASKLARDLTSQ 481 (587)
T ss_dssp HHHHHHHHSCCEEEEEEEECTTEEEEEEEESSCCCCBEEEESSSCGGGTCEEEECCTTSSHHHHHHHHHHHHHHHHHHTS
T ss_pred HHhhhccCCCCcceeeeecCCCcEEEEEEecCCccceeEEeCCCCcccCccEeecccCCChHHHHHHHHHHHHHHHHHcC
Confidence 11100 1 112334567799999999863 5 54 7899999999999999999999988
Q ss_pred cCcccccc-cccCCccccccCCCHHHHHHHHHhhccCCCCCCCCCccccccccCccCCCCCCCccccCCCceeccCCcEE
Q 003990 664 AGAEEIGT-HHCKGKIINVKKASSEEFERFVKEESSRPLRDLSTPLSSAHQMGSCRMGIDPKTSVVNQMGETWGVEGLYL 742 (781)
Q Consensus 664 ~ga~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~H~~GTcrMG~~~~~gVVD~~~rv~g~~nL~V 742 (781)
.+++.+.. +..+++.. ....+|+++++|++.. ..+++|++||||||+++++||||++|||||++||||
T Consensus 482 ~~~~~~~~~~~~pg~~~-~~~~sd~~~~~~ir~~----------~~t~~H~~GTcrMG~~~~~sVVD~~lrV~Gv~nLrV 550 (587)
T 1gpe_A 482 GAMKEYFAGETLPGYNL-VQNATLSQWSDYVLQN----------FRPNWHAVSSCSMMSRELGGVVDATAKVYGTQGLRV 550 (587)
T ss_dssp TTHHHHEEEEEESGGGS-CTTCCHHHHHHHHHHS----------CEECSCCBCTTCBSCGGGTCSBCTTCBBTTCBSEEE
T ss_pred cchhhhcccccCCCccc-cCCCCHHHHHHHHHHh----------cCcccCccCccccCCCCCCceECCCCEEECCCCcEE
Confidence 88766532 22222211 1125899999999974 367899999999999999999999999999999999
Q ss_pred ecCCcCCCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 003990 743 ADTSVFPTALGVNPMVTVQAIAYCTAQSVLDVLR 776 (781)
Q Consensus 743 ~DaSvfPt~~g~NP~lTi~AlA~~iA~~ia~~l~ 776 (781)
+||||||+.+++||++||||+|+++|+.|.+..+
T Consensus 551 vDaSv~P~~~~~Np~~ti~aiAeraAd~I~~~~~ 584 (587)
T 1gpe_A 551 IDGSIPPTQVSSHVMTIFYGMALKVADAILDDYA 584 (587)
T ss_dssp CSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeccCCCCCCcchHHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999998887654
No 5
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=4.8e-61 Score=557.29 Aligned_cols=462 Identities=20% Similarity=0.242 Sum_probs=337.5
Q ss_pred CcccEEEECCCchHHHHHHHHHhC-CCeEEEEcCCCCCCCCCc---cc----ccCCchhhhhhhCCccccCCCceeeeec
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKA-GYKVLVLEKGSYCARSNL---SL----LEGKTMDQMYLAGGMLATDDMGVILLAG 341 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~-G~kVlVLEkG~~~~~~~~---~~----~~~~~~~~~y~~~~~~~~~~~~~~~~~G 341 (781)
.+|||||||+|.+|+++|.+|+++ |++|+|||+|.......+ +. ...+...|.|...+... .++.+.+.+|
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~p~~~~~~~~~~~~w~~~~~p~~~-~~~~~~~~rG 90 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWDYPIEPQEN-GNSFMRHARA 90 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTTCHHHHBGGGGGGGTTSTTBCCEEBCCCSS-SCTTCEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCCCccccChhhHHhhcCCcccccccccccCC-CCceEEeecc
Confidence 579999999999999999999998 899999999986543111 11 11233455565544433 5667889999
Q ss_pred ceecCcchhcccccccCChhhHHHHHHHhcCCCcChhhhhHHHHhhhhhccccC--------C------CccCCccHHHH
Q 003990 342 STVGGGSTINWSASIKTPKHVANEWCDEYELKLFESDLYKEAMEVVCERMGVQS--------E------VEEEGFNNAVL 407 (781)
Q Consensus 342 ~~lGGgs~in~~~~~r~~~~~~~~W~~~~gl~~~~~~~~~~~~~~v~~~l~v~~--------~------~~~~~~~~~~l 407 (781)
++|||+|.+|++.++|..+.+|+.|.++.|.+.|.++++.++|++++..++... . ........+.+
T Consensus 91 k~lGGsS~in~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~~~~~~~~~~~g~~Gpl~v~~~~~~~~~~~~~ 170 (546)
T 2jbv_A 91 KVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDAGPDAPHHGDSGPVHLMNVPPKDPTGVAL 170 (546)
T ss_dssp CSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEETTCBTTBTTSCBSCSEEEEECCSCCHHHHHH
T ss_pred cccccCccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhccCCCCccccCCCCCCEEEecCCCCCHHHHHH
Confidence 999999999999999999999999997578888999999999999887655100 0 01112335778
Q ss_pred HHHHHHcCCCCCCCCCCCCC--CCcceeccccCC-CCcccchhhhchHHHhhCCCeEEecCcEEEEEEccCCCCcceEEE
Q 003990 408 RRGCKELGYPVNNIPRNSPP--DHYCGWCCLGCK-DGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATG 484 (781)
Q Consensus 408 ~~~~~~lG~~~~~~p~n~~~--~~~~g~~~~gc~-~g~k~s~~~~~L~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~G 484 (781)
.++++++|++.. +.|... +.+|++|..+|. .+.|.++..+||.++.++.|++|++++.|++|+++++ .+++|
T Consensus 171 ~~a~~~~G~~~~--d~n~~~~~~~g~~~~~~~~~~~g~R~s~~~a~l~~a~~~~~~~i~~~~~V~~i~~~~~---~~~~G 245 (546)
T 2jbv_A 171 LDACEQAGIPRA--KFNTGTTVVNGANFFQINRRADGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVFDAD---RRCTG 245 (546)
T ss_dssp HHHHHHTTCCBC--CSSSSSCCSSEEEECEECBCTTSBBCCHHHHHTGGGTTCTTEEEECSCEEEEEEECTT---SBEEE
T ss_pred HHHHHHCCCCcc--CCCCCCcCcceEEeeeeecCCCCeEcCHHHHHHHHHhcCCCcEEEeCCEEEEEEECCC---CeEEE
Confidence 899999999887 456666 888999999998 9999999999999988777899999999999999762 28999
Q ss_pred EEEEEeeCCceeEEEEecc-EEEEeccCCCCHHHHHHcCCCC---------------CcccccccccccceeeccccCCC
Q 003990 485 VAFEFQYMGAKDICVVESK-VTIVACGALSTPNLLKRSGLKN---------------ANIGKNLHLHPVTMAWGYFPKTS 548 (781)
Q Consensus 485 V~~~~~~~g~g~~~~i~Ak-~VVLAaGai~Tp~LLl~SGi~~---------------p~VG~nL~dHp~~~~~~~~~~~~ 548 (781)
|++.+ ..+++..+|+|+ +||||||+++||+||++|||++ |+||+||+||+...+...+++..
T Consensus 246 V~~~~--~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~SGiG~~~~L~~~gi~~~~dlP~VG~nL~dH~~~~~~~~~~~~~ 323 (546)
T 2jbv_A 246 VDIVD--SAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVGEHLQDHPEGVVQFEAKQPM 323 (546)
T ss_dssp EEEES--STTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEECCEEEEESSCC
T ss_pred EEEEE--CCCCcEEEEEeCccEEEecCccCCchhhhhcCCCchHHHHhcCCceEeeCcchhhhhhhCccceEEEEecCCC
Confidence 99874 211466789996 9999999999999999999975 66999999999987655444321
Q ss_pred CCCCCccccccCCCCCceeeecccccCcCCCCCCceecCCCCCccchhccCCCCcc---hhHHHHHhhcCCceEEEEEee
Q 003990 549 SSGEWPEEKKTSYEGGIMTAMSTTVGNFGKSGYGAVIQTPALHPGMFSSLMPWVSG---ADIKLRMCKFSRTAHIFVLAR 625 (781)
Q Consensus 549 ~~~~~~~~~~~~~~gg~~ts~~~~~~~~~~~~~~~~le~~~~~p~~~~~~~p~~~g---~~~~~~~~~~~~~~~~~~l~~ 625 (781)
......... ...+....... . .|.....+.|+... ...... ........++.+++
T Consensus 324 -----~~~~~~~~~---~~~f~~~~~~~---------~----~p~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~ 381 (546)
T 2jbv_A 324 -----VAESTQWWE---IGIFTPTEDGL---------D----RPDLMMHYGSVPFDMNTLRHGYP-TTENGFSLTPNVTH 381 (546)
T ss_dssp -----CSCCSSSCC---EEEEECSSTTC---------S----SCSEEEEEESSCCCTTTGGGTCC-CCSSEEEEEEEETT
T ss_pred -----cccccchhh---eEEEEecCCCC---------C----CCceEEEeccccccccccccCcc-CCCCeEEEEEEEcc
Confidence 000000000 00110100000 0 01111111111100 000000 01111223456789
Q ss_pred cCCCceEecC-------cc--ccCCCChh--hHHHHHHHHHHHHHHHHHcCcccccc-cccCCccccccCCCHHHHHHHH
Q 003990 626 DQGSGTVNSP-------YS--ISYQMEAM--DEENLKKGIEKILRILAAAGAEEIGT-HHCKGKIINVKKASSEEFERFV 693 (781)
Q Consensus 626 d~s~G~V~~~-------p~--i~y~~~~~--D~~~l~~~~~~~~~i~~~~ga~~i~~-~~~~~~~~~~~~~~~~~~~~~~ 693 (781)
|.++|+|+++ |. ++|..++. |++.++++++.+++|+.+.++..+.. +..+++ ...+|+++++|+
T Consensus 382 P~srG~V~L~s~dp~~~P~I~~~y~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~p~~----~~~sd~~~~~~i 457 (546)
T 2jbv_A 382 ARSRGTVRLRSRDFRDKPMVDPRYFTDPEGHDMRVMVAGIRKAREIAAQPAMAEWTGRELSPGV----EAQTDEELQDYI 457 (546)
T ss_dssp CCCCBEEECSSSCTTSCCEEECCTTCCTTCHHHHHHHHHHHHHHHHHTSGGGTTTEEEEEESCT----TCCSHHHHHHHH
T ss_pred cCcccEEEecCCCCCCCceecccccCCCchhHHHHHHHHHHHHHHHHcCcchhhcccccccCCC----CCCCHHHHHHHH
Confidence 9999999874 34 47888999 99999999999999999888776532 222332 235899999999
Q ss_pred HhhccCCCCCCCCCccccccccCccCCC-CCCCccccCCCceeccCCcEEecCCcCCCCCCCCChhHHHHHHHHHHHHHH
Q 003990 694 KEESSRPLRDLSTPLSSAHQMGSCRMGI-DPKTSVVNQMGETWGVEGLYLADTSVFPTALGVNPMVTVQAIAYCTAQSVL 772 (781)
Q Consensus 694 ~~~~~~~~~~~~~~~~s~H~~GTcrMG~-~~~~gVVD~~~rv~g~~nL~V~DaSvfPt~~g~NP~lTi~AlA~~iA~~ia 772 (781)
+... .+++|++||||||+ ++++||||++|||||++||||+||||||+++++||++||||+|+++|+.|.
T Consensus 458 r~~~----------~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~ 527 (546)
T 2jbv_A 458 RKTH----------NTVYHPVGTVRMGAVEDEMSPLDPELRVKGVTGLRVADASVMPEHVTVNPNITVMMIGERCADLIR 527 (546)
T ss_dssp HHHC----------EECSCCBCTTCBCCTTCTTCSBCTTCBBTTSBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHC-
T ss_pred HhcC----------CcccccccccccCCCCCCCceECCCCEEECCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHH
Confidence 9753 67899999999995 568899999999999999999999999999999999999999988888887
Q ss_pred HHH
Q 003990 773 DVL 775 (781)
Q Consensus 773 ~~l 775 (781)
+..
T Consensus 528 ~~~ 530 (546)
T 2jbv_A 528 SAR 530 (546)
T ss_dssp ---
T ss_pred hhc
Confidence 654
No 6
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=6.2e-61 Score=556.47 Aligned_cols=474 Identities=19% Similarity=0.202 Sum_probs=317.5
Q ss_pred CcccEEEECCCchHHHHHHHHHhCC-CeEEEEcCCCCCCCC--------CcccccCCchhhhhhhCCccccCCCcee---
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAG-YKVLVLEKGSYCARS--------NLSLLEGKTMDQMYLAGGMLATDDMGVI--- 337 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G-~kVlVLEkG~~~~~~--------~~~~~~~~~~~~~y~~~~~~~~~~~~~~--- 337 (781)
.+|||||||||.+||++|.+|++.| .+|||||||+..... .+.....+.++|.|.+. ..++.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~~~~~~~~i~~P~~~~~~~~~~~dW~y~t~----~~~r~~~~~~ 80 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIGNPEDIPEITTPSSAMDLRNSKYDWAYKTT----MVRRDDYERI 80 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCSCGGGCHHHHCGGGGGGGTTSTTBCCEEEE----EEEETTEEEE
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCceEECchhhhhccCCCcccceEEE----ECCccccccc
Confidence 5799999999999999999999998 799999999862111 11122233456666543 2233333
Q ss_pred ---eeecceecCcchhcccccccCChhhHHHHHHHhcCCCcChhhhhHHHHhhhhhcccc-------------------C
Q 003990 338 ---LLAGSTVGGGSTINWSASIKTPKHVANEWCDEYELKLFESDLYKEAMEVVCERMGVQ-------------------S 395 (781)
Q Consensus 338 ---~~~G~~lGGgs~in~~~~~r~~~~~~~~W~~~~gl~~~~~~~~~~~~~~v~~~l~v~-------------------~ 395 (781)
+.+|+++||+|++|+++|.|+.+.+|+.|.+. |.+.|.+++..+++.+.+...... .
T Consensus 81 ~~~~~rGkvLGGsS~iN~m~~~rg~~~dyd~W~~~-G~~gW~~~~~lpyf~k~e~~~~~~~~~~~~~~~hG~~Gpl~v~~ 159 (577)
T 3q9t_A 81 EKPNTRGKTLGGSSSLNYFTWVPGHKATFDQWEEF-GGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGGGPIPISH 159 (577)
T ss_dssp EEEECCBCSTTGGGGTSCCEECCCCHHHHHTTHHH-HCGGGSHHHHHHHHHHTEEEECTTCCSCGGGGGGCCSCSEEEEE
T ss_pred cccccccccccCccccCceEeccCCHHHHHHHHHh-CCCCCCHHHHHHHHHHHhccCCCccccCCccccCCCCCCEEeeC
Confidence 88999999999999999999999999999865 888899999999998876433211 0
Q ss_pred CCccCC--ccHHHHHHHHHHcCCCCCCCCCCCCCCCcceeccccCCCCcccchhhhchHHHhhCCCeEEecCcEEEEEEc
Q 003990 396 EVEEEG--FNNAVLRRGCKELGYPVNNIPRNSPPDHYCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLH 473 (781)
Q Consensus 396 ~~~~~~--~~~~~l~~~~~~lG~~~~~~p~n~~~~~~~g~~~~gc~~g~k~s~~~~~L~~a~~~gn~~i~~~~~V~~I~~ 473 (781)
...... ...+.+.++++++|++.... .|.....+.+++...+..|.|.++. .+ +.++.|++|++++.|+||++
T Consensus 160 ~~~~~~~~~~~~~~~~a~~~~G~~~~~d-~n~~~~~G~~~~~~~~~~g~R~s~~-~~---l~~r~Nl~v~~~a~v~ri~~ 234 (577)
T 3q9t_A 160 AELIDEMAPFRENLTKAWKSMGQPLIEN-IYDGEMDGLTHCCDTIYRGQRSGSF-LF---VKNKPNITIVPEVHSKRLII 234 (577)
T ss_dssp CCCCGGGHHHHHHHHHHHHHTTCCBCSC-CSSSCCCEEEECEESEETTEECCGG-GG---SSSCTTEEEECSEEEEEEEE
T ss_pred CCCCcccchHHHHHHHHHHHcCCCcCCC-CCCCCcCeEEeecceecCCeEeeHH-HH---HhcCCCeEEEcCcEEEEEEE
Confidence 000000 12355778889999987642 3555556666665555566666433 34 24677899999999999999
Q ss_pred cCCCCcceEEEEEEEEeeCCceeEEEEec-cEEEEeccCCCCHHHHHHcCCCC---------------Cccccccccccc
Q 003990 474 KKRRDRNVATGVAFEFQYMGAKDICVVES-KVTIVACGALSTPNLLKRSGLKN---------------ANIGKNLHLHPV 537 (781)
Q Consensus 474 ~~gg~~~ra~GV~~~~~~~g~g~~~~i~A-k~VVLAaGai~Tp~LLl~SGi~~---------------p~VG~nL~dHp~ 537 (781)
++. +++|+||++... .++..+|+| |+||||||+|+||+|||+|||++ |.||+||+||+.
T Consensus 235 ~~~--~~~a~GV~~~~~---~g~~~~v~A~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~vv~dlP~VG~nl~DH~~ 309 (577)
T 3q9t_A 235 NEA--DRTCKGVTVVTA---AGNELNFFADREVILSQGVFETPKLLMLSGIGPTRELSRHGINTIVDSRHVGQNLMDHPG 309 (577)
T ss_dssp ETT--TTEEEEEEEEET---TSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCCCSEECTTTTEEEBCCEE
T ss_pred eCC--CCEEEEEEEEeC---CCcEEEEEeeeEEEEcccccCChHHHHHcCCCCHHHHHHcCCCeeccCchhhhhhhcCcc
Confidence 842 239999999862 246778999 79999999999999999999874 689999999998
Q ss_pred ceeeccccCCCCC----CCCccc------cccCCCCCceeeecccccCcCCCC--------C--------CceecCCCCC
Q 003990 538 TMAWGYFPKTSSS----GEWPEE------KKTSYEGGIMTAMSTTVGNFGKSG--------Y--------GAVIQTPALH 591 (781)
Q Consensus 538 ~~~~~~~~~~~~~----~~~~~~------~~~~~~gg~~ts~~~~~~~~~~~~--------~--------~~~le~~~~~ 591 (781)
+.+....+..... ...... .......|++++.......|.... + ....-.+...
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~Gpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (577)
T 3q9t_A 310 VPFVLRVKDGFGMDDVLLRHGPKRDAVVSAYNKNRSGPVGSGLLELVGFPRIDKYLEKDAEYRKAKAANGGKDPFSPLGQ 389 (577)
T ss_dssp EEEEEEECTTSSSHHHHTSCSHHHHHHHHHHHHHSCSGGGCCSEEEEEECCCHHHHTTCHHHHHHHHHTTTSCSSCTTSC
T ss_pred eeEEEEeCCCCccchhhhcchhHHHHHHHHHHhcCCCCcccchhheeEEeecChhhhcchhhhhhhhccccccccCCCCC
Confidence 7653222222110 000000 000012233321100000000000 0 0000001112
Q ss_pred ccchhccCCCCcchhHHHHH--hhcC-CceEEEEEeecCCCc-eEecC-------cc--ccCCCChhhHHHHHHHHHHHH
Q 003990 592 PGMFSSLMPWVSGADIKLRM--CKFS-RTAHIFVLARDQGSG-TVNSP-------YS--ISYQMEAMDEENLKKGIEKIL 658 (781)
Q Consensus 592 p~~~~~~~p~~~g~~~~~~~--~~~~-~~~~~~~l~~d~s~G-~V~~~-------p~--i~y~~~~~D~~~l~~~~~~~~ 658 (781)
|.....+.|.... .+.... ..-. .......+++|.|+| +|+++ |. ++|+.++.|++.++++++.++
T Consensus 390 p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~P~SrGG~V~L~S~dp~~~P~i~p~yl~~~~D~~~~~~~~~~~~ 468 (577)
T 3q9t_A 390 PHFELDFVCMFGT-AFQWHFPTPKTGDHLTVVVDLVRPISDPGEVTLNSADPFQQPNINLNFFANDLDIIAMREGIRFSY 468 (577)
T ss_dssp CSEEEEEESSCCG-GGCSSSCCCSSSEEEEEEEEESSCCSCCEEEECSCSCTTSCCEEECCTTCSHHHHHHHHHHHHHHH
T ss_pred ceEEEEecccccc-cccccccCCCCCCEEEEEEEeeeccccCCEEEeCCCCCCCCceEecCcCCCccHHHHHHHHHHHHH
Confidence 2221111111000 000000 0001 123345678999999 99864 33 489999999999999999999
Q ss_pred HHH-HHcCcccccc-cccCCccccccCCCHHHHHHHHHhhccCCCCCCCCCccccccccCccCCCCCCCccccCCCceec
Q 003990 659 RIL-AAAGAEEIGT-HHCKGKIINVKKASSEEFERFVKEESSRPLRDLSTPLSSAHQMGSCRMGIDPKTSVVNQMGETWG 736 (781)
Q Consensus 659 ~i~-~~~ga~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~H~~GTcrMG~~~~~gVVD~~~rv~g 736 (781)
+|+ .+.+++++.. +..+++ ...+|+++++|+++.. .+++|++||||||+++++||||+++||||
T Consensus 469 ~i~~~~~~~~~~~~~e~~p~~----~~~sd~~~~~~ir~~~----------~t~~H~~GTc~Mg~~~~~~VVD~~lrV~G 534 (577)
T 3q9t_A 469 DLLFKGEGFKDLVESEYPWEM----PLDSDKEMHRAVLDRC----------QTAFHPTGTARLSKNIDQGVVDPKLKVHG 534 (577)
T ss_dssp HHHHHSTTGGGTEEEEESSCC----CTTCHHHHHHHHHHHC----------EECSCCBCTTCBCSSTTTCSBCTTCBBTT
T ss_pred HHHHhChhhhhccccccCCCC----CcCCHHHHHHHHHhcc----------ccccccccceecCCCCCCceECCCCeEeC
Confidence 999 7777776532 233332 2358999999999853 68999999999999988999999999999
Q ss_pred cCCcEEecCCcCCCCCCCCChhHHHHHHHHHHHHHHH
Q 003990 737 VEGLYLADTSVFPTALGVNPMVTVQAIAYCTAQSVLD 773 (781)
Q Consensus 737 ~~nL~V~DaSvfPt~~g~NP~lTi~AlA~~iA~~ia~ 773 (781)
++||||+||||||+.+++||++|+||+|+++|+.|.+
T Consensus 535 v~~LrVvDaSv~P~~~~~n~~a~~~~iaekaAd~I~~ 571 (577)
T 3q9t_A 535 IKKLRVADASVIPIIPDCRIQNSVYAVGEKCADMIKA 571 (577)
T ss_dssp CBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEeecccccCCCCCccHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999888877555555443
No 7
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=100.00 E-value=2.1e-55 Score=506.00 Aligned_cols=434 Identities=18% Similarity=0.186 Sum_probs=309.7
Q ss_pred CCCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCCCC-----CCccccc--CCchhhhhhhCCc------------
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCAR-----SNLSLLE--GKTMDQMYLAGGM------------ 328 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~~~-----~~~~~~~--~~~~~~~y~~~~~------------ 328 (781)
...+||+||||+|.+|+++|.+|++.|++|+|||+|..... ..|.... .+.+.|.|.+.++
T Consensus 8 ~~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~~~~p~~~~~~~~~~~~~~~~w~~~~~pq~~~~~~~~~~~~ 87 (507)
T 1coy_A 8 DGDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSWDTPGSDGKIFCGMLNPDKRSMWLADKTDQPVSNFMGFGINK 87 (507)
T ss_dssp TTCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCSCSCCTTSCSSCCSSSCCTTSBBSCSBCCCSSCSBTTBSCCC
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCCCCcccccccccccccccccccccccccccccccccccc
Confidence 44679999999999999999999999999999999986432 1122111 2235666655332
Q ss_pred ---ccc------CCCceeeeecceecCcchhcccccccCChhhHHHHHHHhcCCCcChhhhh-HHHHhhhhhccccCCCc
Q 003990 329 ---LAT------DDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDEYELKLFESDLYK-EAMEVVCERMGVQSEVE 398 (781)
Q Consensus 329 ---~~~------~~~~~~~~~G~~lGGgs~in~~~~~r~~~~~~~~W~~~~gl~~~~~~~~~-~~~~~v~~~l~v~~~~~ 398 (781)
... .++.+.+.+|++|||+|.+|+++++|+.+.+|+.|.. .|.++++. ++|++++..++++....
T Consensus 88 ~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~dfd~w~~-----~w~~~~l~~pyy~~~E~~~~~~~~~~ 162 (507)
T 1coy_A 88 SIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEILP-----SVDSNEMYNKYFPRANTGLGVNNIDQ 162 (507)
T ss_dssp BCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCT-----TSCHHHHHHTHHHHHHHHHTCBCCCH
T ss_pred ccccccceeeEecCCCeEEEEecccchHHHhhCeEEeeCCHHHHHhhCC-----ccchhcchhHHHHHHHHHhCCCCCCC
Confidence 111 4567888999999999999999999999999999962 45668888 99999999888765332
Q ss_pred cC------CccHHHHHHHHHHcCCCCCCCCCC-------------CCCCCcceeccccCCCCcccchhhhchHHHhhCCC
Q 003990 399 EE------GFNNAVLRRGCKELGYPVNNIPRN-------------SPPDHYCGWCCLGCKDGSKKGTSETWLVDLVNSGN 459 (781)
Q Consensus 399 ~~------~~~~~~l~~~~~~lG~~~~~~p~n-------------~~~~~~~g~~~~gc~~g~k~s~~~~~L~~a~~~gn 459 (781)
.. ....+.+.++++++|++....|.+ ...|..||.|..+|..| |.++..+||..+.+++|
T Consensus 163 ~~~~~~~~~~~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~~~~~~~~~~g~C~~gc~~g-R~s~~~~~l~~a~~~~n 241 (507)
T 1coy_A 163 AWFESTEWYKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYGNNAG-KKSLDKTYLAQAAATGK 241 (507)
T ss_dssp HHHHHCGGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTCSCCSTTTTCSTTCCSSS-BCCTTTTHHHHHHHTTC
T ss_pred ccccccccchHHHHHHHHHHHcCCCCccCCcccccCcccccCCCcccCccccccccccCCCC-CcChHHHHHHHHHhcCC
Confidence 11 123467889999999954333322 12467899999999999 99999999999999999
Q ss_pred eEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCc-eeEEEEeccEEEEeccCCCCHHHHHHcC-CC---C--Ccccccc
Q 003990 460 SAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGA-KDICVVESKVTIVACGALSTPNLLKRSG-LK---N--ANIGKNL 532 (781)
Q Consensus 460 ~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~-g~~~~i~Ak~VVLAaGai~Tp~LLl~SG-i~---~--p~VG~nL 532 (781)
++|++++.|++|+++++ +++++||++.+. .+. ++..+|+|++||||||+|+||+||++|| ++ | ++||+||
T Consensus 242 ~~i~~~~~v~~i~~~~~--g~~~~gV~~~~~-~g~~~~~~~~~A~~VIlaaGa~~sp~lL~~Sg~iG~lpnl~d~VG~~l 318 (507)
T 1coy_A 242 LTITTLHRVTKVAPATG--SGYSVTMEQIDE-QGNVVATKVVTADRVFFAAGSVGTSKLLVSMKAQGHLPNLSSQVGEGW 318 (507)
T ss_dssp EEEECSEEEEEEEECSS--SSEEEEEEEECT-TSCEEEEEEEEEEEEEECSHHHHHHHHHHHHHHTTSSTTSCTTTTCCB
T ss_pred cEEEeCCEEEEEEECCC--CCEEEEEEEeCC-CCcccccEEEEeCEEEEccCccCCHHHHHhcccCCCCCccChhhCCcc
Confidence 99999999999999763 137999998741 121 2467899999999999999999999999 54 2 4799999
Q ss_pred ccccccee-eccccCCCCCCCCccccccCCCCCceeeecccccCcCCCCCCceecCCCCCccchhccCCCCcchhHHHHH
Q 003990 533 HLHPVTMA-WGYFPKTSSSGEWPEEKKTSYEGGIMTAMSTTVGNFGKSGYGAVIQTPALHPGMFSSLMPWVSGADIKLRM 611 (781)
Q Consensus 533 ~dHp~~~~-~~~~~~~~~~~~~~~~~~~~~~gg~~ts~~~~~~~~~~~~~~~~le~~~~~p~~~~~~~p~~~g~~~~~~~ 611 (781)
++|+.... +..+.... ..++.+++.+.....+ ..... |..+... +|..+ +
T Consensus 319 ~~h~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~---~~~~~----------~~~~~~~-~~~~~--~---- 369 (507)
T 1coy_A 319 GNNGNIMVGRANHMWDA---------TGSKQATIPTMGIDNW---ADPTA----------PIFAEIA-PLPAG--L---- 369 (507)
T ss_dssp BCTTEEEEEEECCTTSC---------CCSCCCSSCCEEEECT---TCTTS----------CEEEEEE-CCCCS--S----
T ss_pred ccCCccccccccccccc---------ccccCCCcceEEEecc---CCCCC----------CcEEEec-cCCHH--H----
Confidence 99997543 12221110 0122333222111111 10000 1111000 11111 0
Q ss_pred hhcCCceEEEEEeecCCCceEecCc-----cccCCCChhhHHHHHHHHH-HHHHHHHHcCcccccccccCCccccccCCC
Q 003990 612 CKFSRTAHIFVLARDQGSGTVNSPY-----SISYQMEAMDEENLKKGIE-KILRILAAAGAEEIGTHHCKGKIINVKKAS 685 (781)
Q Consensus 612 ~~~~~~~~~~~l~~d~s~G~V~~~p-----~i~y~~~~~D~~~l~~~~~-~~~~i~~~~ga~~i~~~~~~~~~~~~~~~~ 685 (781)
. .+...+..+.+|.++|+|++++ .++|..++ | ..+.++++ .+++|+.+.++ +.. .+.+ .+
T Consensus 370 ~--~~~~~~~~~~~p~s~G~V~L~s~~~~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~~~----~~~~----~~ 435 (507)
T 1coy_A 370 E--TYVSLYLAITKNPERARFQFNSGTGKVDLTWAQSQ-N-QKGIDMAKKVFDKINQKEGT--IYR----TDLF----GV 435 (507)
T ss_dssp C--CCEEEEEEEECCCCCBCEEEETTTTEEEECCCGGG-G-HHHHHHHHHHHHHHHHHHTC--CBC----SSCC------
T ss_pred h--hheeeeEEEeeeCCCcEEEEccCCCceeeccCCCC-c-HHHHHHHHHHHHHHHhhcCC--ccc----Cccc----cc
Confidence 0 2334556778999999998753 47899998 8 56777887 88999988874 211 1111 01
Q ss_pred HHHHHHHHHhhccCCCCCCCCCccccccccCccCCCCCCCccccCCCceeccCCcEEecCCcCCCCCCCCChhHHHHHHH
Q 003990 686 SEEFERFVKEESSRPLRDLSTPLSSAHQMGSCRMGIDPKTSVVNQMGETWGVEGLYLADTSVFPTALGVNPMVTVQAIAY 765 (781)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~s~H~~GTcrMG~~~~~gVVD~~~rv~g~~nL~V~DaSvfPt~~g~NP~lTi~AlA~ 765 (781)
++ ++| ...+++|++||||||. |||++|||||++||||+||||||+++++||++||||+|+
T Consensus 436 d~--~~~-------------~~~~~~H~~GTcrMG~-----VVD~~~rV~Gv~nLrVvDaSv~P~~~~~Np~~ti~alAe 495 (507)
T 1coy_A 436 YY--KTW-------------GDDFTYHPLGGVLLNK-----ATDNFGRLPEYPGLYVVDGSLVPGNVGVNPFVTITALAE 495 (507)
T ss_dssp CC--CSS-------------BCSEESCCBCSSCTTT-----TSCTTSBCTTSTTEEECSGGGSCSCCSSCSHHHHHHHHH
T ss_pred ch--hhh-------------cccccccccCCcchhh-----eECCCCeEeccCCeEEeechhccCCCCcChHHHHHHHHH
Confidence 11 111 2468899999999994 999999999999999999999999999999999999998
Q ss_pred HHHHHHHH
Q 003990 766 CTAQSVLD 773 (781)
Q Consensus 766 ~iA~~ia~ 773 (781)
++|++|.+
T Consensus 496 raAd~I~~ 503 (507)
T 1coy_A 496 RNMDKIIS 503 (507)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88888764
No 8
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=100.00 E-value=6e-55 Score=502.04 Aligned_cols=436 Identities=18% Similarity=0.204 Sum_probs=308.7
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCCCC-C----Cccccc--CCchhhhhhhCCc--------------
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCAR-S----NLSLLE--GKTMDQMYLAGGM-------------- 328 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~~~-~----~~~~~~--~~~~~~~y~~~~~-------------- 328 (781)
.+|||||||+|.+|+++|.+|++.|++|+|||+|..... . .+.... .+.+.|.|.+.++
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~t~p~~~~~~l~~~~~~~~ 83 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSWFKNRTEAPLGSFLWLDVVNRN 83 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCCCCCTTSSSSCCTTSCCGGGSBSCSBCCCCTTCHHHHGGGCCB
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCCCCCcccccccccccCcccccccccccccccccccccccccc
Confidence 469999999999999999999999999999999986442 1 121111 1123455543222
Q ss_pred --cc------cCCCceeeeecceecCcchhcccccccCChhhHHHHHHHhcCCCcChhhhh-HHHHhhhhhccccCCCcc
Q 003990 329 --LA------TDDMGVILLAGSTVGGGSTINWSASIKTPKHVANEWCDEYELKLFESDLYK-EAMEVVCERMGVQSEVEE 399 (781)
Q Consensus 329 --~~------~~~~~~~~~~G~~lGGgs~in~~~~~r~~~~~~~~W~~~~gl~~~~~~~~~-~~~~~v~~~l~v~~~~~~ 399 (781)
.. ..++.+.+.+|++|||+|.+|+++++|+.+.+|+.|. +.|.++++. ++|++++..++++.....
T Consensus 84 ~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~-----~~w~~~~l~~pyy~~~E~~~~~~~~~~~ 158 (504)
T 1n4w_A 84 IDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEIL-----PRVDSSEMYDRYFPRANSMLRVNHIDTK 158 (504)
T ss_dssp CCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC-----TTSCHHHHHHTHHHHHHHHHTCBCCCHH
T ss_pred ccccccccceecCCceEEEEeeecchHHHhhCeEEEeCCHHHHHHhc-----cccchhhhhhHHHHHHHHHhCCCCCCcc
Confidence 11 1456788999999999999999999999999999996 346678888 999999988877653211
Q ss_pred ---C---CccHHHHHHHHHHcCCCCCCCCCC-------------CCCCCcceeccccCCCCcccchhhhchHHHhhCCCe
Q 003990 400 ---E---GFNNAVLRRGCKELGYPVNNIPRN-------------SPPDHYCGWCCLGCKDGSKKGTSETWLVDLVNSGNS 460 (781)
Q Consensus 400 ---~---~~~~~~l~~~~~~lG~~~~~~p~n-------------~~~~~~~g~~~~gc~~g~k~s~~~~~L~~a~~~gn~ 460 (781)
. ....+.+.++++++|++....|.+ ...|..||.|..+|..| |.++..+||..+.+++|+
T Consensus 159 ~~~~~~~~p~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~g~~~~~~~~G~c~~g~~~g-r~s~~~~~l~~a~~~~n~ 237 (504)
T 1n4w_A 159 WFEDTEWYKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHG-KQSLDKTYLAAALGTGKV 237 (504)
T ss_dssp HHHHCGGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSGGGTCSTTCCSSS-BCCTTTTHHHHHHHTTSE
T ss_pred cccCCCcchHHHHHHHHHHHcCCCCccCCcccccCccccccCccccCCcccccccccCCCC-ccCHHHHHHHHHHhcCCc
Confidence 0 123467889999999954333322 12577899999999999 999999999999999999
Q ss_pred EEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHHcC-CC-----CCcccccccc
Q 003990 461 AILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSG-LK-----NANIGKNLHL 534 (781)
Q Consensus 461 ~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~SG-i~-----~p~VG~nL~d 534 (781)
+|++++.|++|+++++ +++++||++.+.++..++..+|+||+||||||+|+||+||++|| ++ +++||+||+|
T Consensus 238 ~i~~~~~V~~i~~~~~--g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~lL~~Sg~ig~i~~~~~~VG~nl~d 315 (504)
T 1n4w_A 238 TIQTLHQVKTIRQTKD--GGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLVRARDTGTLPNLNSEVGAGWGP 315 (504)
T ss_dssp EEEESEEEEEEEECTT--SSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHHHHHHHTTSSTTCCTTTTCCBBC
T ss_pred EEEeCCEEEEEEECCC--CCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHHHHhccccCCCCCCChhhcccccc
Confidence 9999999999999753 13899999874111011467899999999999999999999999 43 3589999999
Q ss_pred cccceee-ccccCCCCCCCCccccccCCCCCceeeecccccCcCCCCCCceecCCCCCccchhccCCCCcchhHHHHHhh
Q 003990 535 HPVTMAW-GYFPKTSSSGEWPEEKKTSYEGGIMTAMSTTVGNFGKSGYGAVIQTPALHPGMFSSLMPWVSGADIKLRMCK 613 (781)
Q Consensus 535 Hp~~~~~-~~~~~~~~~~~~~~~~~~~~~gg~~ts~~~~~~~~~~~~~~~~le~~~~~p~~~~~~~p~~~g~~~~~~~~~ 613 (781)
|+...+. ...+.+. . .++.+++.+..... +..... |.....+ ++..+ +.
T Consensus 316 h~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~---~~~~~~----------~~~~~~~-~~~~~------~~- 365 (504)
T 1n4w_A 316 NGNIMTARANHMWNP--------T-GAHQSSIPALGIDA---WDNSDS----------SVFAEIA-PMPAG------LE- 365 (504)
T ss_dssp TTCEEEEEECCTTCC--------C-CSCCCSSCCEEEEE---CCSSTT----------CEEEEEE-CCCCS------SC-
T ss_pred CCcceeeeccCCCCc--------c-cCcCCCccEEEEec---cCCCCC----------ceEEEec-cCChH------HH-
Confidence 9976542 2111110 0 12223322111111 110000 1110000 01000 00
Q ss_pred cCCceEEEEEeecCCCceEecCc-----cccCCCChhhHHHHHHHHH-HHHHHHHHcCcccccccccCCccccccCCCHH
Q 003990 614 FSRTAHIFVLARDQGSGTVNSPY-----SISYQMEAMDEENLKKGIE-KILRILAAAGAEEIGTHHCKGKIINVKKASSE 687 (781)
Q Consensus 614 ~~~~~~~~~l~~d~s~G~V~~~p-----~i~y~~~~~D~~~l~~~~~-~~~~i~~~~ga~~i~~~~~~~~~~~~~~~~~~ 687 (781)
.....+..+.+|.++|+|++++ .++|..++ | +.+.++++ .+++|+.+.++ + ++. +.
T Consensus 366 -~~~~~~~~~~~p~srG~V~L~s~~~~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~-----~~~--------~~ 427 (504)
T 1n4w_A 366 -TWVSLYLAITKNPQRGTFVYDAATDRAKLNWTRDQ-N-APAVNAAKALFDRINKANGT--I-----YRY--------DL 427 (504)
T ss_dssp -CCEEEEEEEECCCCCBCEEEETTTTEEEECCCGGG-G-HHHHHHHHHHHHHHHHHHTC--C-----BCC--------SS
T ss_pred -hhhhhheeeeccCCCcEEEecCCCCceEeccCCCc-C-HHHHHHHHHHHHHHHhccCC--C-----cCC--------ch
Confidence 1234556778999999998753 46898888 9 77889999 88889888775 1 110 00
Q ss_pred HHHHHHHhhccCCCCCCCCCccccccccCccCCCCCCCccccCCCceeccCCcEEecCCcCCCCCCCCChhHHHHHHHHH
Q 003990 688 EFERFVKEESSRPLRDLSTPLSSAHQMGSCRMGIDPKTSVVNQMGETWGVEGLYLADTSVFPTALGVNPMVTVQAIAYCT 767 (781)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~s~H~~GTcrMG~~~~~gVVD~~~rv~g~~nL~V~DaSvfPt~~g~NP~lTi~AlA~~i 767 (781)
|++.. . .+...+++|++|||||| +|||++|||||++||||+||||||+++++||++||||+|+++
T Consensus 428 ----~~~~~-----~-~~~~~~~~H~~GTcrMG-----~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAera 492 (504)
T 1n4w_A 428 ----FGTQL-----K-AFADDFCYHPLGGCVLG-----KATDDYGRVAGYKNLYVTDGSLIPGSVGVNPFVTITALAERN 492 (504)
T ss_dssp ----SSSSC-----C-SEECSEESSCBCSSCTT-----TTBCTTSBBTTCSSEEECSGGGSCSCCSSCSHHHHHHHHHHH
T ss_pred ----hhhhh-----h-hhccCccccccCCceee-----eEECCCCeEeccCCeEEeeccccCCCCCcChHHHHHHHHHHH
Confidence 11100 0 01246889999999999 699999999999999999999999999999999999999888
Q ss_pred HHHHHHHHH
Q 003990 768 AQSVLDVLR 776 (781)
Q Consensus 768 A~~ia~~l~ 776 (781)
|+.|.+...
T Consensus 493 Ad~I~~~~~ 501 (504)
T 1n4w_A 493 VERIIKQDV 501 (504)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhhc
Confidence 888876543
No 9
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=100.00 E-value=1.1e-53 Score=494.44 Aligned_cols=448 Identities=20% Similarity=0.227 Sum_probs=294.7
Q ss_pred CCCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCCCCCCcccccCC-chhhh------hhhCCccccCCCceeeee
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCARSNLSLLEGK-TMDQM------YLAGGMLATDDMGVILLA 340 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~~~~~~~~~~~~-~~~~~------y~~~~~~~~~~~~~~~~~ 340 (781)
...+|||||||||++|+++|.+|++ |.+|||||+|+...... ....+ .+... |.+.+.....++.+.+.+
T Consensus 23 ~~~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~~~~~--~~~~~~~~~~~~~~~~~~~t~~q~~~~~~~~~~~r 99 (536)
T 1ju2_A 23 LEGSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLPTAYP--NVLTADGFVYNLQQEDDGKTPVERFVSEDGIDNVR 99 (536)
T ss_dssp SEEEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCGGGSG--GGGBGGGHHHHHHSCCCSSSSEEEEECTTSCEEEE
T ss_pred ccCcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCcCCCc--ceecchhHhhhccCCCcCcCCCccccCCCcceeec
Confidence 3467999999999999999999999 99999999998532111 11111 11111 121111223445677899
Q ss_pred cceecCcchhcccccccCChhhHHHHHHHhcCCCcChhhhhHHHHhhhhhccccCCCccCCccHHHHHHHHHHcCCCCCC
Q 003990 341 GSTVGGGSTINWSASIKTPKHVANEWCDEYELKLFESDLYKEAMEVVCERMGVQSEVEEEGFNNAVLRRGCKELGYPVNN 420 (781)
Q Consensus 341 G~~lGGgs~in~~~~~r~~~~~~~~W~~~~gl~~~~~~~~~~~~~~v~~~l~v~~~~~~~~~~~~~l~~~~~~lG~~~~~ 420 (781)
|+++||+|.+|+++++|+.+.+++. .|+ .|.++++.+++++++..+...+. .....+.+.++++++|++...
T Consensus 100 g~~lGGsS~in~~~~~R~~~~d~~~----~G~-~W~~~~~~p~~~~~e~~~~~~~~---~~~~~~~~~~a~~~~G~~~~~ 171 (536)
T 1ju2_A 100 GRVLGGTSIINAGVYARANTSIYSA----SGV-DWDMDLVNQTYEWVEDTIVYKPN---SQSWQSVTKTAFLEAGVHPNH 171 (536)
T ss_dssp ECBTTGGGGTSCCEECBCCTTSSTT----SSS-CCCHHHHHHHHHHHHHHHCBCCC---CCHHHHHHHHHHHHTTCCCEE
T ss_pred ceeccccccccCeEEEeCCHHHHhh----ccC-CCChHHHHHHHHhhhcccCCCCC---CCcHHHHHHHHHHHcCCCCCC
Confidence 9999999999999999999888864 232 24567788888888876654321 122246778889999985421
Q ss_pred CCCCCCCCC--cceeccccCCCCcccchhhhchHHHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEE
Q 003990 421 IPRNSPPDH--YCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDIC 498 (781)
Q Consensus 421 ~p~n~~~~~--~~g~~~~gc~~g~k~s~~~~~L~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~ 498 (781)
. .+..... .+|.|.. +..|.|.++.. ++..+ ++.|++|++++.|++|+++++ ++++++||++.+. .++..
T Consensus 172 ~-~~~~~~~g~~~g~~~~-~~~g~r~s~~~-~~~~~-~~~~~~v~~~~~v~~i~~~~~-~~~~~~GV~~~~~---~g~~~ 243 (536)
T 1ju2_A 172 G-FSLDHEEGTRITGSTF-DNKGTRHAADE-LLNKG-NSNNLRVGVHASVEKIIFSNA-PGLTATGVIYRDS---NGTPH 243 (536)
T ss_dssp E-ECCBCCSEEEECEESB-CTTSBBCCGGG-GGGGS-CTTTEEEEESCEEEEEEECCS-SSCBEEEEEEECT---TSCEE
T ss_pred C-cccCCCCCceeeeEEE-CCCCeEecHHH-hhhhh-cCCCcEEEeCCEEEEEEECCC-CCCEEEEEEEEeC---CCceE
Confidence 0 0000011 1222221 35666665544 66654 566799999999999999753 1248999999751 23444
Q ss_pred EE---eccEEEEeccCCCCHHHHHHcCCCC---------------CcccccccccccceeeccccCCCCCCCCccccccC
Q 003990 499 VV---ESKVTIVACGALSTPNLLKRSGLKN---------------ANIGKNLHLHPVTMAWGYFPKTSSSGEWPEEKKTS 560 (781)
Q Consensus 499 ~i---~Ak~VVLAaGai~Tp~LLl~SGi~~---------------p~VG~nL~dHp~~~~~~~~~~~~~~~~~~~~~~~~ 560 (781)
++ .+|+||||||+|+||+||++|||++ |+||+||+|||...+...++..... .
T Consensus 244 ~~~v~a~k~VILaaGa~~sp~lL~~SGig~~~~l~~~gi~~~~dlP~VG~NL~DH~~~~~~~~~~~~~~~---------~ 314 (536)
T 1ju2_A 244 QAFVRSKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDNPRNFINILPPNPIEP---------T 314 (536)
T ss_dssp EEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTEEEECCEEEEEEECCSSCCCC---------C
T ss_pred EEEeccCCEEEEcCcccCCHHHHHHcCCCCHHHHHhcCCceEecCcccccchhcCcceeEEEEeCCCccc---------c
Confidence 55 4599999999999999999999965 6799999999987765444432100 0
Q ss_pred CCCCceeeecccccCcCCCCCCceecCCCCCccchhccCCCCcchhHHHHHhhcCCceEEEEEeecCCCceEec-C----
Q 003990 561 YEGGIMTAMSTTVGNFGKSGYGAVIQTPALHPGMFSSLMPWVSGADIKLRMCKFSRTAHIFVLARDQGSGTVNS-P---- 635 (781)
Q Consensus 561 ~~gg~~ts~~~~~~~~~~~~~~~~le~~~~~p~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~l~~d~s~G~V~~-~---- 635 (781)
.. ... .....+ .....+. +... . + ...++|... .. +...........+.+|.|+|+|++ +
T Consensus 315 ~~-~~~-~~~~~~---~~~~~g~-~~~~-~-~--~~~~~~~~~-~~----~~~~~~~~~~~~l~~P~SrG~V~L~~s~Dp 379 (536)
T 1ju2_A 315 IV-TVL-GISNDF---YQCSFSS-LPFT-T-P--PFGFFPSSS-YP----LPNSTFAHFASKVAGPLSYGSLTLKSSSNV 379 (536)
T ss_dssp CC-CEE-EECSSE---EEEEEEE-CCCS-S-C--CBTTBSSSC-CC----CCSSCEEEEEEEESSCSCCEEEECSCSSCT
T ss_pred cc-hhh-hHHHHH---HHcCCCC-CCCC-h-h--hheeecCcc-cC----CCCcceEEEeeecCCCCcceEEEeCCCCCc
Confidence 00 000 000000 0000000 0000 0 0 001111100 00 000000122334678999999988 2
Q ss_pred ---cc--ccCCCChhhHHHHHHHHHHHHHHHHHcCccccccccc---CC-cc----ccccCCCHHHHHHHHHhhccCCCC
Q 003990 636 ---YS--ISYQMEAMDEENLKKGIEKILRILAAAGAEEIGTHHC---KG-KI----INVKKASSEEFERFVKEESSRPLR 702 (781)
Q Consensus 636 ---p~--i~y~~~~~D~~~l~~~~~~~~~i~~~~ga~~i~~~~~---~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~ 702 (781)
|. ++|+.++.|++.++++++.+++++.+.++..+..... ++ .. ......+|+++++|++..
T Consensus 380 ~~~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~d~~~~~~ir~~------ 453 (536)
T 1ju2_A 380 RVSPNVKFNYYSNLTDLSHCVSGMKKIGELLSTDALKPYKVEDLPGVEGFNILGIPLPKDQTDDAAFETFCRES------ 453 (536)
T ss_dssp TSCCEECCCTTCSHHHHHHHHHHHHHHHHHHTSGGGGGGCSSCCSTTCSCCBSSSCCCSCTTCHHHHHHHHHHH------
T ss_pred ccCceecccccCCccHHHHHHHHHHHHHHHHcCccchhhhccccccCCCccccccCCCcccCCHHHHHHHHHhc------
Confidence 33 5788999999999999999999999888776543210 11 00 001124789999999975
Q ss_pred CCCCCccccccccCccCCCCCCCccccCCCceeccCCcEEecCCcCCCCCCCCChhHHHHHHHHHHHHHHH
Q 003990 703 DLSTPLSSAHQMGSCRMGIDPKTSVVNQMGETWGVEGLYLADTSVFPTALGVNPMVTVQAIAYCTAQSVLD 773 (781)
Q Consensus 703 ~~~~~~~s~H~~GTcrMG~~~~~gVVD~~~rv~g~~nL~V~DaSvfPt~~g~NP~lTi~AlA~~iA~~ia~ 773 (781)
..+.+|++|||||| +|||++|||||++||||+||||||+.+++||++|+||+|+++|+.|.+
T Consensus 454 ----~~t~~H~~GTcrMG-----~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~t~~aiAer~A~~ii~ 515 (536)
T 1ju2_A 454 ----VASYWHYHGGCLVG-----KVLDGDFRVTGINALRVVDGSTFPYTPASHPQGFYLMLGRYVGIKILQ 515 (536)
T ss_dssp ----CEECSCCEESSCBT-----TTBCTTSBBTTCBTEEECSGGGCSSCSSSSCHHHHHHHHHHHHHHHHH
T ss_pred ----cCccccCcCccCCc-----cEECCCCeEcCCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHH
Confidence 36789999999999 499999999999999999999999999999999999999888877754
No 10
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=100.00 E-value=1.3e-53 Score=496.34 Aligned_cols=466 Identities=19% Similarity=0.278 Sum_probs=300.2
Q ss_pred CCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCCCCCC---cc----------cccCCchh-hhhhhCCccccCCC
Q 003990 269 VIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCARSN---LS----------LLEGKTMD-QMYLAGGMLATDDM 334 (781)
Q Consensus 269 ~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~~~~~---~~----------~~~~~~~~-~~y~~~~~~~~~~~ 334 (781)
..+|||||||||++|+++|.+|+++|++|+|||+|....... .. ....|.+. .++...... ....
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~ 83 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESLFTDSNPF-WWCK 83 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGGGGTCSCCT-TBCT
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccccccccccceeeccchhHHHhhcCCCcc-cccc
Confidence 357999999999999999999999999999999997542110 00 01112211 111110000 0011
Q ss_pred ceeeeecceecCcchhcccccccCChhhHHH---HHHHhcCCCcChhhhhHHHHhhhhhccccCCCc-----cCCccHHH
Q 003990 335 GVILLAGSTVGGGSTINWSASIKTPKHVANE---WCDEYELKLFESDLYKEAMEVVCERMGVQSEVE-----EEGFNNAV 406 (781)
Q Consensus 335 ~~~~~~G~~lGGgs~in~~~~~r~~~~~~~~---W~~~~gl~~~~~~~~~~~~~~v~~~l~v~~~~~-----~~~~~~~~ 406 (781)
...+.+|+++||+|.+|+++++|+.+.+|+. |+. + |.+.+ +++++.++.+....... ......+.
T Consensus 84 ~~~~~~g~~lGGsS~in~~~~~r~~~~d~d~~~~W~~--~---w~~~~--p~~~k~e~~~~~~~~~~~~g~~~~~~~~~~ 156 (546)
T 1kdg_A 84 DITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGWPS--S---WTNHA--PYTSKLSSRLPSTDHPSTDGQRYLEQSFNV 156 (546)
T ss_dssp TBSSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTCCG--G---GSCCH--HHHHHHHHHSCCBSCCSTTSCCCSCHHHHH
T ss_pred ccccccceeecccccccceEEecCChHHhcCcccCcc--c---cCccc--HHHHHHHhcCCCCccCCCCCCccCCHHHHH
Confidence 2456789999999999999999999988877 842 2 33333 66666665443211110 11223467
Q ss_pred HHHHHHHcCCCCCCCCCCC-CCCCcceeccccCCCCcccchhhhchHHHhhCCCeEEecCcEEEEEEccCCCCcceEEEE
Q 003990 407 LRRGCKELGYPVNNIPRNS-PPDHYCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGV 485 (781)
Q Consensus 407 l~~~~~~lG~~~~~~p~n~-~~~~~~g~~~~gc~~g~k~s~~~~~L~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV 485 (781)
+.++++++|++....+.+. ..+.+++.|...|..+.|.++..+|+..+.+++|++|++++.|++|+++++ +++||
T Consensus 157 ~~~a~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~~g~R~s~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~----~~~gV 232 (546)
T 1kdg_A 157 VSQLLKGQGYNQATINDNPNYKDHVFGYSAFDFLNGKRAGPVATYLQTALARPNFTFKTNVMVSNVVRNGS----QILGV 232 (546)
T ss_dssp HHHHHHTTTCEECCGGGSTTCCTTEEEECCBCEETTEECHHHHTHHHHHHTCTTEEEECSCCEEEEEEETT----EEEEE
T ss_pred HHHHHHHCCCCcCCccCCcCCCCcEEeeeeeccCCCcccCHHHHHHHHHhhCCCcEEEeCCEEEEEEEeCC----EEEEE
Confidence 7888999998765432111 234567788888888989888889999998888899999999999999764 89999
Q ss_pred EEEEeeCCceeEEEE-eccEEEEeccCCCCHHHHHHcCCCC--------------------------Ccccccccccccc
Q 003990 486 AFEFQYMGAKDICVV-ESKVTIVACGALSTPNLLKRSGLKN--------------------------ANIGKNLHLHPVT 538 (781)
Q Consensus 486 ~~~~~~~g~g~~~~i-~Ak~VVLAaGai~Tp~LLl~SGi~~--------------------------p~VG~nL~dHp~~ 538 (781)
++.+..++.....++ .+|+||||||+++||+||++|||++ | ||+||+||+.+
T Consensus 233 ~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGig~~~~L~~~gn~s~~GI~v~~~~~~~dlp-VG~nL~DH~~~ 311 (546)
T 1kdg_A 233 QTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWINLP-VGMNAQDNPSI 311 (546)
T ss_dssp EESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCCGGGCBCCC-TTTTBBCCCCE
T ss_pred EEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCCCcHHHHHHhhccccCCcccccccccccCC-cccCcccCcce
Confidence 986421122123345 5699999999999999999999873 4 99999999988
Q ss_pred eeeccccCCCCCCCCcc-ccc------cCC---CCCceeeecccccCcCCCCCCceecCCCCCccchhccCCC---Ccch
Q 003990 539 MAWGYFPKTSSSGEWPE-EKK------TSY---EGGIMTAMSTTVGNFGKSGYGAVIQTPALHPGMFSSLMPW---VSGA 605 (781)
Q Consensus 539 ~~~~~~~~~~~~~~~~~-~~~------~~~---~gg~~ts~~~~~~~~~~~~~~~~le~~~~~p~~~~~~~p~---~~g~ 605 (781)
.+....+.......... +.. ..| ..|+++........+. .........+.....+.|. ..+.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (546)
T 1kdg_A 312 NLVFTHPSIDAYENWADVWSNPRPADAAQYLANQSGVFAGASPKLNFWR-----AYSGSDGFTRYAQGTVRPGAASVNSS 386 (546)
T ss_dssp EEEEECTTCCCGGGGTTTTTSCCHHHHHHHHHHSCSGGGSCSCCEEEEE-----EEECTTSCEEEEEEEEEESCSCCCCS
T ss_pred eEEEecCCcccccchhhhhcchhHHHHHHHHHcCCcccccCCcceEEEE-----ccCCCCcchhhhhheecccccccccc
Confidence 65432211100000000 000 000 1122211000000000 0000000000000000000 0000
Q ss_pred hHHHHHhhcCC-ceEEEEEeec-CCCceEecCc-----cc--cCCCChhhHHHHHHHHHHHHHHHHHcCcccccccccCC
Q 003990 606 DIKLRMCKFSR-TAHIFVLARD-QGSGTVNSPY-----SI--SYQMEAMDEENLKKGIEKILRILAAAGAEEIGTHHCKG 676 (781)
Q Consensus 606 ~~~~~~~~~~~-~~~~~~l~~d-~s~G~V~~~p-----~i--~y~~~~~D~~~l~~~~~~~~~i~~~~ga~~i~~~~~~~ 676 (781)
.. . ...+ ......+.++ .|+|+|++++ .| +|..++.|++.++++++.+++++.+.+..+. ..++
T Consensus 387 --~~-~-~~~~~~~~~~~~~~p~~srG~v~L~s~~~~~~i~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~~~~---~~p~ 459 (546)
T 1kdg_A 387 --LP-Y-NASQIFTITVYLSTGIQSRGRIGIDAALRGTVLTPPWLVNPVDKTVLLQALHDVVSNIGSIPGLTM---ITPD 459 (546)
T ss_dssp --SC-C-CGGGEEEEEEEECTTCCCCBEEEECTTCCEEEEECCTTCSHHHHHHHHHHHHHHTTTGGGSTTCEE---EESC
T ss_pred --cc-c-CCCCeEEEEeeecCCCCCCceEecCCCCCCCcccccccCCchHHHHHHHHHHHHHHHhcCCCcccc---cCCC
Confidence 00 0 0011 1223346677 9999998753 23 6999999999999999999999887754331 1122
Q ss_pred ccccccCCCHHHHHHHHHhhccCCCCCCCCCccccccccCccCCCCCCCccccCCCceeccCCcEEecCCcCCCCCCCCC
Q 003990 677 KIINVKKASSEEFERFVKEESSRPLRDLSTPLSSAHQMGSCRMGIDPKTSVVNQMGETWGVEGLYLADTSVFPTALGVNP 756 (781)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~H~~GTcrMG~~~~~gVVD~~~rv~g~~nL~V~DaSvfPt~~g~NP 756 (781)
+ ..+++++.+|++.. ..+++|++||||||+++++||||++|||||++||||+||||||+.+++||
T Consensus 460 ~-----~~~~~~~~~~~~~~----------~~t~~H~~GTcrMG~~~~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np 524 (546)
T 1kdg_A 460 V-----TQTLEEYVDAYDPA----------TMNSNHWVSSTTIGSSPQSAVVDSNVKVFGTNNLFIVDAGIIPHLPTGNP 524 (546)
T ss_dssp T-----TSCHHHHHHHSCGG----------GGCCSCCBCTTCBCSCTTTCSBCTTCBBTTCSSEEECSGGGCSSCCSSCS
T ss_pred C-----CCCHHHHHHHHHHh----------cCcccccccceecCCCCCCeeECCCCeEccCCCcEEeEecccCCCCCccH
Confidence 1 24788888888653 35789999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 003990 757 MVTVQAIAYCTAQSVLDV 774 (781)
Q Consensus 757 ~lTi~AlA~~iA~~ia~~ 774 (781)
++||||+|+++|+.|.+.
T Consensus 525 ~~ti~aiAeraAd~I~~~ 542 (546)
T 1kdg_A 525 QGTLMSAAEQAAAKILAL 542 (546)
T ss_dssp HHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999988877777653
No 11
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=100.00 E-value=1.1e-41 Score=399.96 Aligned_cols=299 Identities=15% Similarity=0.217 Sum_probs=194.0
Q ss_pred ccchhhhchHHH------hhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHH
Q 003990 443 KKGTSETWLVDL------VNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPN 516 (781)
Q Consensus 443 k~s~~~~~L~~a------~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~ 516 (781)
+.++..+++... .++.|++|++++.|++|+.+++ +++++||++.+. .+++..++.|+.||||+|++.+|+
T Consensus 252 r~s~~~~~l~~~~~l~~~~~~~nv~v~~~~~V~~i~~~~~--~~~v~GV~~~~~--~~g~~~~i~A~~VIlaaG~~~s~~ 327 (623)
T 3pl8_A 252 EWSSANTVFDLQNRPNTDAPEERFNLFPAVACERVVRNAL--NSEIESLHIHDL--ISGDRFEIKADVYVLTAGAVHNTQ 327 (623)
T ss_dssp EECCHHHHCCCCCEEETTEEEEEEEEECSEEEEEEEECTT--SSCEEEEEEEET--TTCCEEEECEEEEEECSCTTHHHH
T ss_pred ccchHHhhhhhhhcchhhccCCCEEEEeCCEEEEEEEECC--CCEEEEEEEEEc--CCCcEEEEECCEEEEcCCCcCCHH
Confidence 455566676655 5566799999999999998753 238999999862 234667899999999999999999
Q ss_pred HHHHcCCCC-------------CcccccccccccceeeccccCCCCCCCCccccccCCCCC-ceeee--cccccC-----
Q 003990 517 LLKRSGLKN-------------ANIGKNLHLHPVTMAWGYFPKTSSSGEWPEEKKTSYEGG-IMTAM--STTVGN----- 575 (781)
Q Consensus 517 LLl~SGi~~-------------p~VG~nL~dHp~~~~~~~~~~~~~~~~~~~~~~~~~~gg-~~ts~--~~~~~~----- 575 (781)
||+.|||+. |.||+||+||+...+...+.+.....-..++...-+.|+ .+... .....+
T Consensus 328 lL~~sgiG~~~~l~~~~i~~~l~~vG~nl~dh~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~p~~~~~p~ 407 (623)
T 3pl8_A 328 LLVNSGFGQLGRPNPANPPELLPSLGSYITEQSLVFCQTVMSTELIDSVKSDMTIRGTPGELTYSVTYTPGASTNKHPDW 407 (623)
T ss_dssp HHHTTTSSCCSSCCTTSCCSSCTTTTBSCBCCCEEEEEEEECHHHHHHHTTTCEEESCTTSTTCEEECCTTCTTCSSCHH
T ss_pred HHHhcCCCccccccccCCCCCCcccccchhhCcCceEEEEECCcccccccccccccccCCCcceecccccCcccccCCch
Confidence 999999975 579999999998876444432210000000000001111 11000 000000
Q ss_pred cCC-------CCCCceecCC--CCCccc---hhccCCC------------CcchhHHHHHhhcCCceEEEEEeecCCCce
Q 003990 576 FGK-------SGYGAVIQTP--ALHPGM---FSSLMPW------------VSGADIKLRMCKFSRTAHIFVLARDQGSGT 631 (781)
Q Consensus 576 ~~~-------~~~~~~le~~--~~~p~~---~~~~~p~------------~~g~~~~~~~~~~~~~~~~~~l~~d~s~G~ 631 (781)
|.. ......+..| +..|.. +..-.|| ..|..+...+ .-...++.-..|.+.++
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~e~~p~~~n~ 484 (623)
T 3pl8_A 408 WNEKVKNHMMQHQEDPLPIPFEDPEPQVTTLFQPSHPWHTQIHRDAFSYGAVQQSIDSRL---IVDWRFFGRTEPKEENK 484 (623)
T ss_dssp HHHHHHHHHHHCTTCCCSSCTTCCCCEEECCCBTTBCEEEEEECCSCCCSCCCCSSCGGG---EEEEEEEECCCCCTTCE
T ss_pred hhhhhhhhhhcccccccccccccccccccccccccCcchhhhhhhhccccccccccccce---EEEEEEEEeeccCCCCE
Confidence 000 0000000000 000000 0000121 0111111110 00012233345777888
Q ss_pred EecCc-----------cccCCCChh-hHHHHHHHHHHHHHHHHHcCcccccccccCCccccccCCCHHHHHHHHHhhccC
Q 003990 632 VNSPY-----------SISYQMEAM-DEENLKKGIEKILRILAAAGAEEIGTHHCKGKIINVKKASSEEFERFVKEESSR 699 (781)
Q Consensus 632 V~~~p-----------~i~y~~~~~-D~~~l~~~~~~~~~i~~~~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 699 (781)
|++++ +++|..+++ |++.+.++++.+.+|+.++|++.+.... .+
T Consensus 485 v~L~~~~~D~~g~P~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~-------------------- 540 (623)
T 3pl8_A 485 LWFSDKITDAYNMPQPTFDFRFPAGRTSKEAEDMMTDMCVMSAKIGGFLPGSLP----QF-------------------- 540 (623)
T ss_dssp EEEEEEEECTTSSEEEEEECCCCTTHHHHHHHHHHHHHHHHHTTTEEECTTSCS----EE--------------------
T ss_pred EEECCCCcCCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHhcCCcccCchh----hc--------------------
Confidence 87643 479999999 9999999999999999998876542110 00
Q ss_pred CCCCCCCCccccccccCccCCCC-CCCccc-cCCCceeccCCcEEecCCcCCCCCCCCChhHHHHHHHHHHHHHHHHHHh
Q 003990 700 PLRDLSTPLSSAHQMGSCRMGID-PKTSVV-NQMGETWGVEGLYLADTSVFPTALGVNPMVTVQAIAYCTAQSVLDVLRR 777 (781)
Q Consensus 700 ~~~~~~~~~~s~H~~GTcrMG~~-~~~gVV-D~~~rv~g~~nL~V~DaSvfPt~~g~NP~lTi~AlA~~iA~~ia~~l~~ 777 (781)
.....++|+|||||||.+ +++||| |++|||||++||||+|+||||+++++||++||||+|+|+|++|++.+++
T Consensus 541 -----~~~~~~~H~~gt~~mg~~~~~~~vvvd~~~~~~~~~~l~v~d~s~~p~~~~~np~~t~~a~a~r~a~~i~~~~~~ 615 (623)
T 3pl8_A 541 -----MEPGLVLHLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNFTP 615 (623)
T ss_dssp -----CCTTTTCCCBCTTCBCSSTTTTTCSBCTTCBBTTCSSEEECSGGGCCSCCCSCCHHHHHHHHHHHHHHHHHHCCC
T ss_pred -----cCCCCcccCCCceeCCCCCCCCeeEECCCCCEecCCCeEEecCCccCCCCCcChHHHHHHHHHHHHHHHHHHhhc
Confidence 013578999999999998 999998 9999999999999999999999999999999999999999999998865
No 12
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.54 E-value=1e-13 Score=159.30 Aligned_cols=66 Identities=8% Similarity=0.108 Sum_probs=50.8
Q ss_pred hhhchHHHhhCCCeEEecCcEEEEEEcc-CCCCcceEEEEEEEEeeCCceeEEEEec-cEEEEeccCCC-CHHHHHHc
Q 003990 447 SETWLVDLVNSGNSAILPGCEAIEVLHK-KRRDRNVATGVAFEFQYMGAKDICVVES-KVTIVACGALS-TPNLLKRS 521 (781)
Q Consensus 447 ~~~~L~~a~~~gn~~i~~~~~V~~I~~~-~gg~~~ra~GV~~~~~~~g~g~~~~i~A-k~VVLAaGai~-Tp~LLl~S 521 (781)
...++..+.+.| ++|+++++|++|+.+ ++ +|+||++.. .++..+|+| |.||||+|++. ++.++.+-
T Consensus 205 ~~~L~~~~~~~G-v~i~~~t~v~~L~~~~~g----~v~GV~~~~----~g~~~~i~A~k~VVlAtGG~~~n~~m~~~~ 273 (510)
T 4at0_A 205 MKPLVETAEKLG-VRAEYDMRVQTLVTDDTG----RVVGIVAKQ----YGKEVAVRARRGVVLATGSFAYNDKMIEAH 273 (510)
T ss_dssp HHHHHHHHHHTT-CEEECSEEEEEEEECTTC----CEEEEEEEE----TTEEEEEEEEEEEEECCCCCTTCHHHHHHH
T ss_pred HHHHHHHHHHcC-CEEEecCEeEEEEECCCC----cEEEEEEEE----CCcEEEEEeCCeEEEeCCChhhCHHHHHHh
Confidence 334455556666 999999999999987 44 899999875 235678999 59999999998 56666543
No 13
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.38 E-value=1.9e-12 Score=150.58 Aligned_cols=63 Identities=10% Similarity=0.152 Sum_probs=48.1
Q ss_pred hchHHHhhCCCeEEecCcEEEEEEccC-CCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCH-HHHH
Q 003990 449 TWLVDLVNSGNSAILPGCEAIEVLHKK-RRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTP-NLLK 519 (781)
Q Consensus 449 ~~L~~a~~~gn~~i~~~~~V~~I~~~~-gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp-~LLl 519 (781)
.++..+.+.| ++|+++++|++|+.++ + +|+||++.+ ..++..+|+||.||+|+|++... .++.
T Consensus 255 ~L~~~~~~~g-v~i~~~~~v~~l~~~~~g----~v~Gv~~~~---~~g~~~~i~A~~VVlAtGg~s~~~~~~~ 319 (566)
T 1qo8_A 255 TLRKAAKEQG-IDTRLNSRVVKLVVNDDH----SVVGAVVHG---KHTGYYMIGAKSVVLATGGYGMNKEMIA 319 (566)
T ss_dssp HHHHHHHHTT-CCEECSEEEEEEEECTTS----BEEEEEEEE---TTTEEEEEEEEEEEECCCCCTTCHHHHH
T ss_pred HHHHHHHhcC-CEEEeCCEEEEEEECCCC----cEEEEEEEe---CCCcEEEEEcCEEEEecCCcccCHHHHH
Confidence 3444455566 9999999999999876 5 899999875 23356689999999999998854 4443
No 14
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.37 E-value=4.5e-12 Score=147.55 Aligned_cols=63 Identities=17% Similarity=0.194 Sum_probs=47.7
Q ss_pred hchHHHhhCCCeEEecCcEEEEEEccC-CCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCC-HHHHH
Q 003990 449 TWLVDLVNSGNSAILPGCEAIEVLHKK-RRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALST-PNLLK 519 (781)
Q Consensus 449 ~~L~~a~~~gn~~i~~~~~V~~I~~~~-gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~T-p~LLl 519 (781)
.++..+.+.| ++|+++++|++|+.++ + +|+||++.+ ..++..+|+||.||+|+|++.. +.++.
T Consensus 260 ~L~~~~~~~g-v~i~~~~~v~~l~~~~~g----~v~Gv~~~~---~~g~~~~i~a~~VVlAtGg~~~n~~~~~ 324 (571)
T 1y0p_A 260 VLYDNAVKRN-IDLRMNTRGIEVLKDDKG----TVKGILVKG---MYKGYYWVKADAVILATGGFAKNNERVA 324 (571)
T ss_dssp HHHHHHHHTT-CEEESSEEEEEEEECTTS----CEEEEEEEE---TTTEEEEEECSEEEECCCCCTTCHHHHH
T ss_pred HHHHHHHhcC-CEEEeCCEeeEeEEcCCC----eEEEEEEEe---CCCcEEEEECCeEEEeCCCcccCHHHHH
Confidence 3444455565 9999999999999875 4 899999875 1335668999999999999875 44443
No 15
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.33 E-value=3.2e-12 Score=139.34 Aligned_cols=67 Identities=18% Similarity=0.231 Sum_probs=48.9
Q ss_pred hhhchHHHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHHc-CCC
Q 003990 447 SETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRS-GLK 524 (781)
Q Consensus 447 ~~~~L~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~S-Gi~ 524 (781)
...++..+.+.| ++|+++++|++|..+++ .+..|.+. +++..+++||.||+|+|+ +|+.|+... |+.
T Consensus 153 ~~~l~~~~~~~G-v~i~~~~~v~~i~~~~~----~~~~v~~~-----~g~~~~~~a~~VV~A~G~-~s~~l~~~~~g~~ 220 (369)
T 3dme_A 153 MLAYQGDAESDG-AQLVFHTPLIAGRVRPE----GGFELDFG-----GAEPMTLSCRVLINAAGL-HAPGLARRIEGIP 220 (369)
T ss_dssp HHHHHHHHHHTT-CEEECSCCEEEEEECTT----SSEEEEEC-----TTSCEEEEEEEEEECCGG-GHHHHHHTEETSC
T ss_pred HHHHHHHHHHCC-CEEECCCEEEEEEEcCC----ceEEEEEC-----CCceeEEEeCEEEECCCc-chHHHHHHhcCCC
Confidence 334555566677 99999999999998764 22334332 223457999999999997 488999888 875
No 16
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.26 E-value=7.6e-11 Score=138.72 Aligned_cols=59 Identities=22% Similarity=0.220 Sum_probs=45.8
Q ss_pred hhchHHHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCC
Q 003990 448 ETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALS 513 (781)
Q Consensus 448 ~~~L~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~ 513 (781)
.+++..+.+.| ++|++++.|++|+.+++ +|+||.+.+.. +++...|+||.||||+|++.
T Consensus 162 ~~L~~~a~~~g-v~i~~~~~v~~L~~~~g----~v~Gv~~~~~~--~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 162 FAVANECLKLG-VSIQDRKEAIALIHQDG----KCYGAVVRDLV--TGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHT-CEEECSEEEEEEEEETT----EEEEEEEEETT--TCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHhCC-CEEEECcEEEEEEecCC----EEEEEEEEECC--CCcEEEEEcCEEEEccCcch
Confidence 34444455566 99999999999998765 89999987532 33566899999999999985
No 17
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.25 E-value=7.4e-11 Score=137.84 Aligned_cols=58 Identities=17% Similarity=0.139 Sum_probs=44.9
Q ss_pred hchHHHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCC
Q 003990 449 TWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALS 513 (781)
Q Consensus 449 ~~L~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~ 513 (781)
+++..+.+.+ ++|++++.|++|+.+++ +|.||.+.+.. +++...|+||.||||+|++.
T Consensus 160 ~L~~~~~~~g-v~i~~~~~v~~Li~~~g----~v~Gv~~~~~~--~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 160 TLYGRSLRYD-TSYFVEYFALDLLMENG----ECRGVIALCIE--DGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHTTSC-CEEEETEEEEEEEEETT----EEEEEEEEETT--TCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHhCC-CEEEEceEEEEEEEECC----EEEEEEEEEcC--CCcEEEEEcCeEEECCCccc
Confidence 3444444544 99999999999998765 89999987522 34567899999999999985
No 18
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.25 E-value=2.6e-11 Score=140.62 Aligned_cols=71 Identities=14% Similarity=0.107 Sum_probs=57.0
Q ss_pred hhhhchHHHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHHcCCC
Q 003990 446 TSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLK 524 (781)
Q Consensus 446 ~~~~~L~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~SGi~ 524 (781)
....++..+.+.| ++|+++++|++|..+++ ++.||.+.+. .+++...|+||.||+|+|+ ++..|+...|+.
T Consensus 172 l~~~L~~~a~~~G-~~i~~~~~V~~l~~~~g----~v~gV~~~d~--~tg~~~~i~A~~VV~AaG~-~s~~l~~~~g~~ 242 (561)
T 3da1_A 172 LTLEIMKEAVARG-AVALNYMKVESFIYDQG----KVVGVVAKDR--LTDTTHTIYAKKVVNAAGP-WVDTLREKDRSK 242 (561)
T ss_dssp HHHHHHHHHHHTT-CEEEESEEEEEEEEETT----EEEEEEEEET--TTCCEEEEEEEEEEECCGG-GHHHHHHTTTCC
T ss_pred HHHHHHHHHHHcC-CEEEcCCEEEEEEEcCC----eEEEEEEEEc--CCCceEEEECCEEEECCCc-chHHHHHhcCCC
Confidence 3445556677787 99999999999998765 8999998862 2335678999999999997 588999888876
No 19
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.24 E-value=3.7e-11 Score=139.74 Aligned_cols=65 Identities=15% Similarity=0.261 Sum_probs=48.9
Q ss_pred hchHHHhhCCCeEEecCcEEEEEEccC-CCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCC-CHHHHHHc
Q 003990 449 TWLVDLVNSGNSAILPGCEAIEVLHKK-RRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALS-TPNLLKRS 521 (781)
Q Consensus 449 ~~L~~a~~~gn~~i~~~~~V~~I~~~~-gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~-Tp~LLl~S 521 (781)
.++..+.+.| ++|+++++|++|+.++ + +|+||++.+ ..++..+|+||.||||+|++. .+.++..-
T Consensus 260 ~L~~~~~~~g-v~i~~~t~v~~l~~~~~g----~v~GV~~~~---~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~ 326 (572)
T 1d4d_A 260 VLWDNAVKRG-TDIRLNSRVVRILEDASG----KVTGVLVKG---EYTGYYVIKADAVVIAAGGFAKNNERVSKY 326 (572)
T ss_dssp HHHHHHHHTT-CEEESSEEEEEEEEC--C----CEEEEEEEE---TTTEEEEEECSEEEECCCCCTTCHHHHHHH
T ss_pred HHHHHHHHcC-CeEEecCEEEEEEECCCC----eEEEEEEEe---CCCcEEEEEcCEEEEeCCCCccCHHHHHHh
Confidence 3444455666 9999999999998876 5 899999875 133567899999999999987 45666544
No 20
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.24 E-value=1e-10 Score=128.51 Aligned_cols=62 Identities=18% Similarity=0.245 Sum_probs=47.1
Q ss_pred hchHHHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHHcCCC
Q 003990 449 TWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLK 524 (781)
Q Consensus 449 ~~L~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~SGi~ 524 (781)
.++..+.+.| ++|+++++|++|..+++ +++||.+. .+ +++|+.||+|+|++ ++.|+...|+.
T Consensus 154 ~l~~~~~~~G-v~i~~~~~v~~i~~~~~----~v~gv~~~-----~g---~i~a~~VV~A~G~~-s~~l~~~~g~~ 215 (382)
T 1y56_B 154 AFAVKAKEYG-AKLLEYTEVKGFLIENN----EIKGVKTN-----KG---IIKTGIVVNATNAW-ANLINAMAGIK 215 (382)
T ss_dssp HHHHHHHHTT-CEEECSCCEEEEEESSS----BEEEEEET-----TE---EEECSEEEECCGGG-HHHHHHHHTCC
T ss_pred HHHHHHHHCC-CEEECCceEEEEEEECC----EEEEEEEC-----Cc---EEECCEEEECcchh-HHHHHHHcCCC
Confidence 3445555666 99999999999988765 67777542 12 68999999999974 77888777764
No 21
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.24 E-value=1.3e-10 Score=128.72 Aligned_cols=64 Identities=16% Similarity=0.245 Sum_probs=47.6
Q ss_pred hchHHHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHHcCCCCC
Q 003990 449 TWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNA 526 (781)
Q Consensus 449 ~~L~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~SGi~~p 526 (781)
.++..+.+.| ++|+++++|++|..+++ ++.+|.+. + + +++||.||+|+|+ +++.|+...|+..|
T Consensus 179 ~l~~~~~~~g-~~i~~~~~v~~i~~~~~----~~~~v~~~---~--g---~~~a~~vV~a~G~-~s~~l~~~~g~~~~ 242 (405)
T 2gag_B 179 AFARKANEMG-VDIIQNCEVTGFIKDGE----KVTGVKTT---R--G---TIHAGKVALAGAG-HSSVLAEMAGFELP 242 (405)
T ss_dssp HHHHHHHHTT-CEEECSCCEEEEEESSS----BEEEEEET---T--C---CEEEEEEEECCGG-GHHHHHHHHTCCCC
T ss_pred HHHHHHHHCC-CEEEcCCeEEEEEEeCC----EEEEEEeC---C--c---eEECCEEEECCch-hHHHHHHHcCCCCC
Confidence 3444455666 99999999999988754 67777543 1 2 6899999999997 47788887777543
No 22
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.22 E-value=1.3e-10 Score=135.52 Aligned_cols=59 Identities=12% Similarity=0.219 Sum_probs=45.3
Q ss_pred hchHHHhhCCCeEEecCcEEEEEEcc-CCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCC
Q 003990 449 TWLVDLVNSGNSAILPGCEAIEVLHK-KRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALST 514 (781)
Q Consensus 449 ~~L~~a~~~gn~~i~~~~~V~~I~~~-~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~T 514 (781)
.++..+.+.+ ++|++++.|++|+.+ ++ +|+||.+.+.. +++...|+||.||+|+|++..
T Consensus 148 ~L~~~~~~~g-v~i~~~~~v~~L~~~~~g----~v~Gv~~~~~~--~g~~~~i~A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 148 TLYQQNLKNH-TTIFSEWYALDLVKNQDG----AVVGCTALCIE--TGEVVYFKARATVLATGGAGR 207 (588)
T ss_dssp HHHHHHHHTT-CEEEETEEEEEEEECTTS----CEEEEEEEETT--TCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHHhCC-CEEEeCcEEEEEEECCCC----EEEEEEEEEcC--CCeEEEEEcCEEEECCCCCcc
Confidence 4444555665 999999999999986 44 89999987522 235668999999999999753
No 23
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.20 E-value=7.7e-11 Score=130.44 Aligned_cols=36 Identities=42% Similarity=0.539 Sum_probs=33.7
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
.++||||||+|++|+++|+.|+++|++|+||||+..
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTF 38 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 368999999999999999999999999999999863
No 24
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.19 E-value=7e-11 Score=136.32 Aligned_cols=65 Identities=15% Similarity=0.206 Sum_probs=45.5
Q ss_pred hhhchHHHhhCCCeEEecCcEEEEEEccCCCC---cceEEEEEEEEeeCCceeEEEEeccEEEEeccCCC
Q 003990 447 SETWLVDLVNSGNSAILPGCEAIEVLHKKRRD---RNVATGVAFEFQYMGAKDICVVESKVTIVACGALS 513 (781)
Q Consensus 447 ~~~~L~~a~~~gn~~i~~~~~V~~I~~~~gg~---~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~ 513 (781)
...++..+.++.|++|++++.|++|+.++++. ..+|.||.+.+.. +++..+|+||.||+|+|++.
T Consensus 141 ~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~--~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 141 ETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRN--KETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp -CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETT--TTEEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcC--CCcEEEEEcCeEEECCCCcc
Confidence 34455555554569999999999999743210 0178999987521 23566899999999999874
No 25
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.16 E-value=1.9e-10 Score=135.17 Aligned_cols=61 Identities=20% Similarity=0.251 Sum_probs=44.9
Q ss_pred chHHHhhC-CCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCC
Q 003990 450 WLVDLVNS-GNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALS 513 (781)
Q Consensus 450 ~L~~a~~~-gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~ 513 (781)
+...+.+. +|++|+.++.|++|+.+++ ...+|+||.+.+.. +++...|+||.||||+|++.
T Consensus 172 L~~~a~~~~~gV~i~~~~~v~dLi~~~~-~~g~v~Gv~~~~~~--~g~~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 172 VAEAAKNALGQDRIIERIFIVKLLLDKN-TPNRIAGAVGFNLR--ANEVHIFKANAMVVACGGAV 233 (662)
T ss_dssp HHHHHHHHHCTTTEECSEEECCCEECSS-STTBEEEEEEEESS--SSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHhcCCCcEEEEceEEEEEEEeCC-ccceEEEEEEEEcC--CCcEEEEEeCEEEECCCccc
Confidence 33444454 2599999999999988753 11289999887532 34567899999999999875
No 26
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.15 E-value=7.6e-11 Score=129.17 Aligned_cols=63 Identities=19% Similarity=0.230 Sum_probs=46.8
Q ss_pred hhhchHHHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHHcCCC
Q 003990 447 SETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLK 524 (781)
Q Consensus 447 ~~~~L~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~SGi~ 524 (781)
...++..+.+.| ++|+++++|++|..+++ + .+|.+. . .+|+|+.||+|+|+ +++.|+...|+.
T Consensus 157 ~~~l~~~a~~~G-v~i~~~~~V~~i~~~~~----~-~~V~t~-----~---g~i~a~~VV~A~G~-~s~~l~~~~g~~ 219 (381)
T 3nyc_A 157 HQGYLRGIRRNQ-GQVLCNHEALEIRRVDG----A-WEVRCD-----A---GSYRAAVLVNAAGA-WCDAIAGLAGVR 219 (381)
T ss_dssp HHHHHHHHHHTT-CEEESSCCCCEEEEETT----E-EEEECS-----S---EEEEESEEEECCGG-GHHHHHHHHTCC
T ss_pred HHHHHHHHHHCC-CEEEcCCEEEEEEEeCC----e-EEEEeC-----C---CEEEcCEEEECCCh-hHHHHHHHhCCC
Confidence 344555566777 99999999999998764 3 334322 1 27899999999997 588888887764
No 27
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.14 E-value=2.5e-10 Score=133.33 Aligned_cols=61 Identities=8% Similarity=0.096 Sum_probs=47.2
Q ss_pred hhchHHHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCC
Q 003990 448 ETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALST 514 (781)
Q Consensus 448 ~~~L~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~T 514 (781)
..++..+.+.+|++|++++.|++|+.+++ +|+||.+.+.. +++...|+||.||+|+|++..
T Consensus 138 ~~L~~~~~~~gnv~i~~~~~v~~l~~~~g----~v~Gv~~~~~~--~G~~~~i~A~~VVlAtGg~s~ 198 (602)
T 1kf6_A 138 HTLFQTSLQFPQIQRFDEHFVLDILVDDG----HVRGLVAMNMM--EGTLVQIRANAVVMATGGAGR 198 (602)
T ss_dssp HHHHHHHTTCTTEEEEETEEEEEEEEETT----EEEEEEEEETT--TTEEEEEECSCEEECCCCCGG
T ss_pred HHHHHHHHhCCCcEEEeCCEEEEEEEeCC----EEEEEEEEEcC--CCcEEEEEcCeEEECCCCCcc
Confidence 34445555677799999999999998765 89999887522 235668999999999999754
No 28
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.14 E-value=2.1e-11 Score=136.94 Aligned_cols=59 Identities=14% Similarity=0.197 Sum_probs=45.0
Q ss_pred hhhchHHHhhCCCeEEecCc---EEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHH
Q 003990 447 SETWLVDLVNSGNSAILPGC---EAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLL 518 (781)
Q Consensus 447 ~~~~L~~a~~~gn~~i~~~~---~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LL 518 (781)
...+...+.+.| ++|++++ +|++|..+++ +++||.+.+ + .+|+||.||+|+|++ |+.|+
T Consensus 164 ~~~L~~~a~~~G-v~i~~~t~~~~V~~i~~~~~----~v~gV~t~~---G----~~i~Ad~VV~AtG~~-s~~l~ 225 (438)
T 3dje_A 164 LVAAAREAQRMG-VKFVTGTPQGRVVTLIFENN----DVKGAVTAD---G----KIWRAERTFLCAGAS-AGQFL 225 (438)
T ss_dssp HHHHHHHHHHTT-CEEEESTTTTCEEEEEEETT----EEEEEEETT---T----EEEECSEEEECCGGG-GGGTS
T ss_pred HHHHHHHHHhcC-CEEEeCCcCceEEEEEecCC----eEEEEEECC---C----CEEECCEEEECCCCC-hhhhc
Confidence 344555566677 9999999 9999998765 788887642 2 268999999999985 66664
No 29
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.13 E-value=3.8e-10 Score=123.94 Aligned_cols=39 Identities=33% Similarity=0.441 Sum_probs=34.9
Q ss_pred CCCCCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 266 PSLVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 266 ~~~~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
++.+.+|||||||+|++|+++|+.|+++|++|+|||++.
T Consensus 12 ~~~~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 12 RAMKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp --CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred hccCCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 335578999999999999999999999999999999985
No 30
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.11 E-value=4.1e-10 Score=127.00 Aligned_cols=178 Identities=21% Similarity=0.302 Sum_probs=99.8
Q ss_pred CCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCCCCCCcccccCCchhhhhhhCCccccCCCceeeeecceecCcc
Q 003990 269 VIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCARSNLSLLEGKTMDQMYLAGGMLATDDMGVILLAGSTVGGGS 348 (781)
Q Consensus 269 ~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~G~~lGGgs 348 (781)
..+|||||||+|++|+++|..|+++|++|+||||.+.... ... ..|++
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~-----------~~~---------------------~sg~g 71 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGR-----------KLA---------------------ISGGG 71 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCH-----------HHH---------------------HTGGG
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCc-----------eeE---------------------EeCCC
Confidence 3469999999999999999999999999999999863100 000 00111
Q ss_pred hhcccccccCChhhHHHHHHHhcCCCcChhhhh-HHHHhhhhhccccCCCccCCccHHHHHHHHHHcCCCCCCCCCCCCC
Q 003990 349 TINWSASIKTPKHVANEWCDEYELKLFESDLYK-EAMEVVCERMGVQSEVEEEGFNNAVLRRGCKELGYPVNNIPRNSPP 427 (781)
Q Consensus 349 ~in~~~~~r~~~~~~~~W~~~~gl~~~~~~~~~-~~~~~v~~~l~v~~~~~~~~~~~~~l~~~~~~lG~~~~~~p~n~~~ 427 (781)
..|.... ...+.+..... ....+. ..+. .+....+.+++++.|+++....
T Consensus 72 ~~~~~~~-----~~~~~~~~~~~----~~~~~~~~~~~---------------~~~~~~~~~~~~~~G~~~~~~~----- 122 (447)
T 2i0z_A 72 RCNVTNR-----LPLDEIVKHIP----GNGRFLYSAFS---------------IFNNEDIITFFENLGVKLKEED----- 122 (447)
T ss_dssp TCCCEEC-----SCHHHHHHTCT----BTGGGGHHHHH---------------HSCHHHHHHHHHHTTCCEEECG-----
T ss_pred ceeccCc-----ccHHHHHHHhc----cChHHHHHHHH---------------hcCHHHHHHHHHhcCCceEEee-----
Confidence 1121110 01111111110 001111 0000 0112345566777887654211
Q ss_pred CCcceeccccCCCCcccchhhhchHHHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEE
Q 003990 428 DHYCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIV 507 (781)
Q Consensus 428 ~~~~g~~~~gc~~g~k~s~~~~~L~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVL 507 (781)
.+.-++ ...........++..+.+.| ++|+++++|++|..+++ ++.+|.+.+ + + +|+||.||+
T Consensus 123 -~g~~~p----~~~~~~~l~~~L~~~~~~~G-V~i~~~~~V~~i~~~~~----~v~~V~~~~---G--~--~i~Ad~VVl 185 (447)
T 2i0z_A 123 -HGRMFP----VSNKAQSVVDALLTRLKDLG-VKIRTNTPVETIEYENG----QTKAVILQT---G--E--VLETNHVVI 185 (447)
T ss_dssp -GGEEEE----TTCCHHHHHHHHHHHHHHTT-CEEECSCCEEEEEEETT----EEEEEEETT---C--C--EEECSCEEE
T ss_pred -CCEEEC----CCCCHHHHHHHHHHHHHHCC-CEEEeCcEEEEEEecCC----cEEEEEECC---C--C--EEECCEEEE
Confidence 011111 11111223334455555666 99999999999987654 777776542 2 2 589999999
Q ss_pred eccCCCCH---------HHHHHcCCC
Q 003990 508 ACGALSTP---------NLLKRSGLK 524 (781)
Q Consensus 508 AaGai~Tp---------~LLl~SGi~ 524 (781)
|+|++..| .++.+.|+.
T Consensus 186 AtGg~s~~~~g~tG~g~~la~~~G~~ 211 (447)
T 2i0z_A 186 AVGGKSVPQTGSTGDGYAWAEKAGHT 211 (447)
T ss_dssp CCCCSSSGGGSCSSHHHHHHHHTTCC
T ss_pred CCCCCcCCCCCCCcHHHHHHHHCCCC
Confidence 99997654 566666664
No 31
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.11 E-value=7e-10 Score=128.89 Aligned_cols=71 Identities=11% Similarity=0.129 Sum_probs=54.6
Q ss_pred hhhhchHHHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHHcCCC
Q 003990 446 TSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLK 524 (781)
Q Consensus 446 ~~~~~L~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~SGi~ 524 (781)
....++..+.+.| ++|+++++|++|..+++ ++.||.+.+.. +++...|+||.||+|+|++ +..|+...|+.
T Consensus 190 l~~~l~~~a~~~G-a~i~~~t~V~~l~~~~~----~v~gV~~~d~~--tg~~~~i~A~~VV~AaG~w-s~~l~~~~g~~ 260 (571)
T 2rgh_A 190 LVIDNIKKAAEDG-AYLVSKMKAVGFLYEGD----QIVGVKARDLL--TDEVIEIKAKLVINTSGPW-VDKVRNLNFTR 260 (571)
T ss_dssp HHHHHHHHHHHTT-CEEESSEEEEEEEEETT----EEEEEEEEETT--TCCEEEEEBSCEEECCGGG-HHHHHTTCCSS
T ss_pred HHHHHHHHHHHcC-CeEEeccEEEEEEEeCC----EEEEEEEEEcC--CCCEEEEEcCEEEECCChh-HHHHHHhhccC
Confidence 3345566677787 99999999999998765 88999887521 2344579999999999975 88888766653
No 32
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.08 E-value=1.9e-09 Score=126.87 Aligned_cols=58 Identities=17% Similarity=0.127 Sum_probs=42.4
Q ss_pred HhhCCCe-EEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCC
Q 003990 454 LVNSGNS-AILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALST 514 (781)
Q Consensus 454 a~~~gn~-~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~T 514 (781)
+.+..|+ +|++++.|++|+.++++ ..+|+||.+.+.. +++...|+||.||+|+|++..
T Consensus 161 ~~~~~gv~~i~~~~~v~~L~~~~~~-~g~v~Gv~~~~~~--~g~~~~i~A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 161 AKMAVGEENIYERVFIFELLKDNND-PNAVAGAVGFSVR--EPKFYVFKAKAVILATGGATL 219 (643)
T ss_dssp HHHHHCGGGEECSEEEEEEEECTTC-TTBEEEEEEEESS--SSCEEEEECSEEEECCCCBCS
T ss_pred HHhcCCCcEEEecCEEEEEEEcCCc-cceeEEEEEEEec--CCcEEEEEcCEEEECCCcccc
Confidence 3344149 99999999999986431 1279999886532 235568999999999999853
No 33
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.07 E-value=3.3e-10 Score=137.57 Aligned_cols=66 Identities=11% Similarity=0.122 Sum_probs=49.8
Q ss_pred hhhchHHHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHHcCCCCC
Q 003990 447 SETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNA 526 (781)
Q Consensus 447 ~~~~L~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~SGi~~p 526 (781)
...++..+.+.| ++|+++++|++|..+++ ++.+|.+. .+ +|+|+.||+|+|++ ++.|+...|+..|
T Consensus 154 ~~~L~~~a~~~G-v~i~~~t~V~~i~~~~~----~v~~V~t~-----~G---~i~Ad~VV~AaG~~-s~~l~~~~g~~~p 219 (830)
T 1pj5_A 154 VQLLIKRTESAG-VTYRGSTTVTGIEQSGG----RVTGVQTA-----DG---VIPADIVVSCAGFW-GAKIGAMIGMAVP 219 (830)
T ss_dssp HHHHHHHHHHTT-CEEECSCCEEEEEEETT----EEEEEEET-----TE---EEECSEEEECCGGG-HHHHHHTTTCCCC
T ss_pred HHHHHHHHHHcC-CEEECCceEEEEEEeCC----EEEEEEEC-----Cc---EEECCEEEECCccc-hHHHHHHhCCCcc
Confidence 344555566777 99999999999998765 67777542 12 68999999999974 7888887787543
No 34
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.06 E-value=7.6e-10 Score=121.72 Aligned_cols=35 Identities=37% Similarity=0.418 Sum_probs=33.3
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
+|||||||+|++|+++|+.|+++|++|+|||++..
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~ 37 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDP 37 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 58999999999999999999999999999999864
No 35
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.03 E-value=1.7e-09 Score=123.63 Aligned_cols=66 Identities=12% Similarity=-0.005 Sum_probs=49.4
Q ss_pred hhhhchHHHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHH
Q 003990 446 TSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKR 520 (781)
Q Consensus 446 ~~~~~L~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~ 520 (781)
....++..+.+.| ++|+++++|++|..++ ++.+|.+.+.. +++...|+||.||+|+|++ +..|+..
T Consensus 151 l~~~l~~~a~~~G-v~i~~~~~V~~l~~~~-----~~~~V~~~d~~--~G~~~~i~A~~VV~AtG~~-s~~l~~~ 216 (501)
T 2qcu_A 151 LVLANAQMVVRKG-GEVLTRTRATSARREN-----GLWIVEAEDID--TGKKYSWQARGLVNATGPW-VKQFFDD 216 (501)
T ss_dssp HHHHHHHHHHHTT-CEEECSEEEEEEEEET-----TEEEEEEEETT--TCCEEEEEESCEEECCGGG-HHHHHHH
T ss_pred HHHHHHHHHHHcC-CEEEcCcEEEEEEEeC-----CEEEEEEEECC--CCCEEEEECCEEEECCChh-HHHHHHH
Confidence 3445566667777 9999999999998764 46788776421 2345689999999999975 7777764
No 36
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.00 E-value=3.6e-10 Score=134.13 Aligned_cols=35 Identities=23% Similarity=0.433 Sum_probs=33.1
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
..+||||||||++|+++|+.|+++|++|+||||..
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 305 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADE 305 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 45999999999999999999999999999999975
No 37
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.00 E-value=1.3e-09 Score=121.51 Aligned_cols=38 Identities=32% Similarity=0.488 Sum_probs=32.8
Q ss_pred CCCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
+..+|||||||+|++|+++|+.|+++|++|+||||++.
T Consensus 24 ~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~ 61 (417)
T 3v76_A 24 VAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARA 61 (417)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 34579999999999999999999999999999999873
No 38
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.98 E-value=1e-09 Score=130.47 Aligned_cols=36 Identities=22% Similarity=0.215 Sum_probs=33.7
Q ss_pred CCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 269 VIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 269 ~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
..++||||||||++|+++|+.|+++|++|+||||+.
T Consensus 262 ~~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 297 (689)
T 3pvc_A 262 TRCDDIAIIGGGIVSALTALALQRRGAVVTLYCADA 297 (689)
T ss_dssp SCCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 346999999999999999999999999999999975
No 39
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.97 E-value=1.3e-09 Score=122.67 Aligned_cols=34 Identities=38% Similarity=0.352 Sum_probs=32.3
Q ss_pred CcccEEEECCCchHHHHHHHHHhCC-CeEEEEcCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAG-YKVLVLEKG 303 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G-~kVlVLEkG 303 (781)
.++||||||+|++|+++|++|+++| ++|+||||.
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~ 56 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAG 56 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccC
Confidence 5799999999999999999999999 999999993
No 40
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.94 E-value=7.5e-09 Score=115.29 Aligned_cols=61 Identities=18% Similarity=0.246 Sum_probs=46.0
Q ss_pred hhhhchHHHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHH
Q 003990 446 TSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLK 519 (781)
Q Consensus 446 ~~~~~L~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl 519 (781)
....+...+.++| ++|+++++|++|..+++ +++||.+. + .++.||.||+|+|+..+.+||.
T Consensus 198 l~~~l~~~~~~~G-~~i~~~~~V~~i~~~~~----~~~gv~~~----g----~~~~ad~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 198 IIDALETVISANG-GKIHTGQEVSKILIENG----KAAGIIAD----D----RIHDADLVISNLGHAATAVLCS 258 (425)
T ss_dssp HHHHHHHHHHHTT-CEEECSCCEEEEEEETT----EEEEEEET----T----EEEECSEEEECSCHHHHHHHTT
T ss_pred HHHHHHHHHHHcC-CEEEECCceeEEEEECC----EEEEEEEC----C----EEEECCEEEECCCHHHHHHhcC
Confidence 3444444555677 99999999999998765 78888642 2 2689999999999877776554
No 41
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.93 E-value=3.8e-09 Score=111.61 Aligned_cols=36 Identities=33% Similarity=0.427 Sum_probs=33.5
Q ss_pred CcccEEEECCCchHHHHHHHHHhC-CCeEEEEcCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKA-GYKVLVLEKGSY 305 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~-G~kVlVLEkG~~ 305 (781)
.+|||||||+|++|+.+|+.|++. |++|+||||.+.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~ 74 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVS 74 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCC
Confidence 468999999999999999999997 999999999863
No 42
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.92 E-value=3e-09 Score=120.65 Aligned_cols=31 Identities=32% Similarity=0.402 Sum_probs=30.5
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKG 303 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG 303 (781)
||||||||++|+++|..|++.|++|+||||+
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 8999999999999999999999999999998
No 43
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.90 E-value=1.9e-09 Score=122.94 Aligned_cols=63 Identities=10% Similarity=0.026 Sum_probs=42.3
Q ss_pred hhhhchHHHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHH
Q 003990 446 TSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKR 520 (781)
Q Consensus 446 ~~~~~L~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~ 520 (781)
...++...+.+.| ++|+++++|++|+.+++ +++||++.+ + .++.||.||++++...+-..|+.
T Consensus 223 l~~aL~~~~~~~G-g~I~~~~~V~~I~~~~~----~~~gV~~~~---g----~~~~ad~VV~~a~~~~~~~~Ll~ 285 (501)
T 4dgk_A 223 LVQGMIKLFQDLG-GEVVLNARVSHMETTGN----KIEAVHLED---G----RRFLTQAVASNADVVHTYRDLLS 285 (501)
T ss_dssp HHHHHHHHHHHTT-CEEECSCCEEEEEEETT----EEEEEEETT---S----CEEECSCEEECCC----------
T ss_pred hHHHHHHHHHHhC-CceeeecceeEEEeeCC----eEEEEEecC---C----cEEEcCEEEECCCHHHHHHHhcc
Confidence 3444445556777 99999999999999876 899998763 2 26899999999998777665553
No 44
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.88 E-value=5.5e-09 Score=114.14 Aligned_cols=35 Identities=31% Similarity=0.442 Sum_probs=33.2
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
+|||||||+|++|+++|+.|+++|++|+||||+..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 58999999999999999999999999999999864
No 45
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.88 E-value=7.3e-09 Score=114.05 Aligned_cols=68 Identities=21% Similarity=0.325 Sum_probs=48.7
Q ss_pred hhhchHH-HhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHHcCCCC
Q 003990 447 SETWLVD-LVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKN 525 (781)
Q Consensus 447 ~~~~L~~-a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~SGi~~ 525 (781)
...+|.. +.+.| ++|+.+++|++|..+++ +++||.+.+ . +...+++||.||.|+|. +| .+....|+..
T Consensus 104 l~~~L~~~~~~~g-v~i~~~~~v~~i~~~~~----~v~gv~~~~--~--~~~~~~~a~~vV~A~G~-~s-~~~~~~g~~~ 172 (397)
T 3cgv_A 104 FDKHLAALAAKAG-ADVWVKSPALGVIKENG----KVAGAKIRH--N--NEIVDVRAKMVIAADGF-ES-EFGRWAGLKS 172 (397)
T ss_dssp HHHHHHHHHHHHT-CEEESSCCEEEEEEETT----EEEEEEEEE--T--TEEEEEEEEEEEECCCT-TC-HHHHHHTCCT
T ss_pred HHHHHHHHHHhCC-CEEEECCEEEEEEEeCC----EEEEEEEEE--C--CeEEEEEcCEEEECCCc-ch-HhHHhcCCCc
Confidence 3344443 44556 99999999999998765 888898864 1 23468999999999996 45 5555556644
No 46
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.82 E-value=1.3e-08 Score=112.94 Aligned_cols=36 Identities=31% Similarity=0.527 Sum_probs=33.6
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
.+|||||||+|++|+++|+.|++.|.+|+||||++.
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~ 38 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKK 38 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 369999999999999999999999999999999863
No 47
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.82 E-value=1.2e-08 Score=109.78 Aligned_cols=35 Identities=34% Similarity=0.492 Sum_probs=33.1
Q ss_pred CcccEEEECCCchHHHHHHHHHhC--CCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKA--GYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~--G~kVlVLEkG~ 304 (781)
.+|||||||+|++|+++|+.|+++ |++|+|||++.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~ 114 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGV 114 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 469999999999999999999997 99999999986
No 48
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.78 E-value=1.7e-08 Score=116.05 Aligned_cols=38 Identities=26% Similarity=0.458 Sum_probs=34.7
Q ss_pred CCCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
...++||||||+|++|+++|+.|++.|++|+|||+++.
T Consensus 104 ~~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~ 141 (549)
T 3nlc_A 104 ENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE 141 (549)
T ss_dssp TTCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCC
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCc
Confidence 34569999999999999999999999999999999863
No 49
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.76 E-value=7.7e-08 Score=107.15 Aligned_cols=34 Identities=47% Similarity=0.709 Sum_probs=32.5
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYC 306 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~ 306 (781)
||||||||++|+++|++|+++|++|+||||.+..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMI 35 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 8999999999999999999999999999998764
No 50
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.75 E-value=2e-08 Score=113.30 Aligned_cols=41 Identities=27% Similarity=0.470 Sum_probs=37.5
Q ss_pred CCCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCCCC
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCAR 308 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~~~ 308 (781)
+..++||||||||.+|+++|+.|+++|++|+||||.+++..
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG 48 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGG 48 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCc
Confidence 55679999999999999999999999999999999987654
No 51
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.74 E-value=6.5e-09 Score=115.50 Aligned_cols=35 Identities=34% Similarity=0.488 Sum_probs=33.2
Q ss_pred CcccEEEECCCchHHHHHHHHHhC--CCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKA--GYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~--G~kVlVLEkG~ 304 (781)
.++||||||+|++|+++|+.|+++ |++|+|||++.
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGG 71 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 459999999999999999999999 99999999985
No 52
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.74 E-value=5.6e-09 Score=114.45 Aligned_cols=67 Identities=21% Similarity=0.309 Sum_probs=47.7
Q ss_pred hhhch-HHHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHHcCCC
Q 003990 447 SETWL-VDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLK 524 (781)
Q Consensus 447 ~~~~L-~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~SGi~ 524 (781)
...+| ..+.+.| ++++.+++|+.+..+++ ++++|.... .+...+++|+.||.|.|+ +|. +-...|+.
T Consensus 104 ~~~~L~~~a~~~G-~~~~~~~~v~~~~~~~~----~~~~v~~~~----~~~~~~~~a~~vIgAdG~-~S~-vr~~~g~~ 171 (397)
T 3oz2_A 104 FDKHLAALAAKAG-ADVWVKSPALGVIKENG----KVAGAKIRH----NNEIVDVRAKMVIAADGF-ESE-FGRWAGLK 171 (397)
T ss_dssp HHHHHHHHHHHHT-CEEESSCCEEEEEEETT----EEEEEEEEE----TTEEEEEEEEEEEECCCT-TCH-HHHHHTCG
T ss_pred HHHHHHHHHHhcC-cEEeeeeeeeeeeeccc----eeeeeeecc----cccceEEEEeEEEeCCcc-ccH-HHHHcCCC
Confidence 33444 3455666 99999999999988876 788887764 235678999999999996 443 33444553
No 53
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.73 E-value=1.7e-08 Score=113.66 Aligned_cols=41 Identities=27% Similarity=0.552 Sum_probs=37.8
Q ss_pred CCCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCCCC
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCAR 308 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~~~ 308 (781)
+..+|||||||+|.+|+++|+.|+++|++|+||||++++..
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg 57 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGG 57 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCC
Confidence 56789999999999999999999999999999999987654
No 54
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.73 E-value=6.2e-08 Score=111.04 Aligned_cols=58 Identities=19% Similarity=0.217 Sum_probs=44.0
Q ss_pred hhhchHH-HhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCC
Q 003990 447 SETWLVD-LVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGAL 512 (781)
Q Consensus 447 ~~~~L~~-a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai 512 (781)
...+|.. +.+.| ++|+.+++|++|..+++ ++.||.+.. .+++..+++||.||.|+|..
T Consensus 113 l~~~L~~~a~~~G-v~i~~~~~V~~v~~~~~----~v~gv~~~~---~dG~~~~i~ad~VI~AdG~~ 171 (512)
T 3e1t_A 113 FDDMLLRNSERKG-VDVRERHEVIDVLFEGE----RAVGVRYRN---TEGVELMAHARFIVDASGNR 171 (512)
T ss_dssp HHHHHHHHHHHTT-CEEESSCEEEEEEEETT----EEEEEEEEC---SSSCEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHhCC-CEEEcCCEEEEEEEECC----EEEEEEEEe---CCCCEEEEEcCEEEECCCcc
Confidence 3344444 44555 99999999999998765 888998875 23345689999999999974
No 55
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.70 E-value=4.7e-08 Score=104.59 Aligned_cols=35 Identities=37% Similarity=0.499 Sum_probs=33.3
Q ss_pred CcccEEEECCCchHHHHHHHHHhC--CCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKA--GYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~--G~kVlVLEkG~ 304 (781)
.+|||+|||+|++|+++|+.|++. |++|+|+|+.+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~ 100 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 100 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCc
Confidence 579999999999999999999998 99999999986
No 56
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.61 E-value=5.8e-07 Score=103.47 Aligned_cols=36 Identities=42% Similarity=0.566 Sum_probs=33.9
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
.++||||||+|++|+++|+.|++.|.+|+||||.+.
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~ 39 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPG 39 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 469999999999999999999999999999999863
No 57
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.60 E-value=1.2e-08 Score=111.27 Aligned_cols=37 Identities=35% Similarity=0.433 Sum_probs=34.3
Q ss_pred CCCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
|..++||||||+|++|+++|++|+++|++|+||||..
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 3457999999999999999999999999999999976
No 58
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.59 E-value=1.1e-07 Score=105.78 Aligned_cols=36 Identities=36% Similarity=0.720 Sum_probs=33.6
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
.+|||||||||++|+++|+.|+++|++|+||||...
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~ 39 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKF 39 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 459999999999999999999999999999999863
No 59
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.58 E-value=1.3e-07 Score=106.61 Aligned_cols=54 Identities=19% Similarity=0.171 Sum_probs=41.4
Q ss_pred HHHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCC
Q 003990 452 VDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGAL 512 (781)
Q Consensus 452 ~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai 512 (781)
..+.+.| ++|+.+++|++|..+++ +++||.+.+. ++|+..+++|+.||.|.|+.
T Consensus 108 ~~a~~~g-v~i~~~~~v~~i~~~~~----~v~gv~~~~~--~~G~~~~~~ad~VV~AdG~~ 161 (453)
T 3atr_A 108 KEAQDRG-VEIWDLTTAMKPIFEDG----YVKGAVLFNR--RTNEELTVYSKVVVEATGYS 161 (453)
T ss_dssp HHHHHTT-CEEESSEEEEEEEEETT----EEEEEEEEET--TTTEEEEEECSEEEECCGGG
T ss_pred HHHHHcC-CEEEeCcEEEEEEEECC----EEEEEEEEEc--CCCceEEEEcCEEEECcCCc
Confidence 3344555 99999999999988765 8888888741 12345689999999999974
No 60
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.57 E-value=9e-08 Score=111.03 Aligned_cols=35 Identities=26% Similarity=0.403 Sum_probs=33.1
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.+|||||||||.+|+.+|..||+.|.+|+|||++.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 61 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNI 61 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecc
Confidence 46999999999999999999999999999999974
No 61
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.56 E-value=7.7e-08 Score=111.18 Aligned_cols=35 Identities=29% Similarity=0.311 Sum_probs=33.1
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.+|||||||||.+|+.+|..||+.|.+|+|||++.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~ 60 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNA 60 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecc
Confidence 46999999999999999999999999999999974
No 62
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.54 E-value=9.4e-07 Score=93.83 Aligned_cols=68 Identities=15% Similarity=0.175 Sum_probs=50.9
Q ss_pred chHHHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHHcCCC
Q 003990 450 WLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLK 524 (781)
Q Consensus 450 ~L~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~SGi~ 524 (781)
++..+.+..+++|++++.|++|..++ ++.+|.+.+.. .++...+.++.||+|+|..-+..+|..+|+.
T Consensus 195 ~~~~~~~~~gv~~~~~~~v~~i~~~~-----~~~~v~~~~~~--~g~~~~~~~D~vv~a~G~~p~~~~~~~~g~~ 262 (323)
T 3f8d_A 195 YVETVKKKPNVEFVLNSVVKEIKGDK-----VVKQVVVENLK--TGEIKELNVNGVFIEIGFDPPTDFAKSNGIE 262 (323)
T ss_dssp HHHHHHTCTTEEEECSEEEEEEEESS-----SEEEEEEEETT--TCCEEEEECSEEEECCCEECCHHHHHHTTCC
T ss_pred HHHHHHhCCCcEEEeCCEEEEEeccC-----ceeEEEEEECC--CCceEEEEcCEEEEEECCCCChhHHhhcCee
Confidence 34445555359999999999998653 67778877521 2355678999999999987776888888875
No 63
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.54 E-value=2.5e-07 Score=107.60 Aligned_cols=36 Identities=22% Similarity=0.518 Sum_probs=33.7
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
.++||||||||++|+++|+.|++.|++|+|||+...
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~ 57 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAF 57 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCC
Confidence 469999999999999999999999999999999853
No 64
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.52 E-value=1e-06 Score=102.04 Aligned_cols=36 Identities=44% Similarity=0.566 Sum_probs=31.8
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
.+|||||||+|++|+++|+.|+++|++|+||||.+.
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~ 83 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVE 83 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence 569999999999999999999999999999999864
No 65
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.52 E-value=1.1e-07 Score=110.38 Aligned_cols=37 Identities=27% Similarity=0.363 Sum_probs=33.2
Q ss_pred CCCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
...+|||||||||.+|+.+|..||+.|.+|+|||+..
T Consensus 18 ~~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 54 (641)
T 3cp8_A 18 GSHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDL 54 (641)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred ccCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecc
Confidence 3456999999999999999999999999999999974
No 66
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.49 E-value=1.1e-06 Score=100.18 Aligned_cols=37 Identities=38% Similarity=0.540 Sum_probs=35.2
Q ss_pred CCCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.+.++||||||+|++|+++|..|+++|.+|+||||.+
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~ 44 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLV 44 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 6678999999999999999999999999999999976
No 67
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.49 E-value=9.1e-07 Score=94.37 Aligned_cols=66 Identities=17% Similarity=0.319 Sum_probs=47.3
Q ss_pred HHHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHHcCCC
Q 003990 452 VDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLK 524 (781)
Q Consensus 452 ~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~SGi~ 524 (781)
..+.+.| ++|+++++|++|..+++ ++.+|.+.+.. +++...+.+|.||+|+|...++.+|..+|+.
T Consensus 198 ~~l~~~g-v~i~~~~~v~~i~~~~~----~v~~v~~~~~~--~g~~~~i~~D~vi~a~G~~p~~~~l~~~gl~ 263 (319)
T 3cty_A 198 QEIKKRN-IPYIMNAQVTEIVGDGK----KVTGVKYKDRT--TGEEKLIETDGVFIYVGLIPQTSFLKDSGVK 263 (319)
T ss_dssp HHHHHTT-CCEECSEEEEEEEESSS----SEEEEEEEETT--TCCEEEECCSEEEECCCEEECCGGGTTSCCC
T ss_pred HHHhcCC-cEEEcCCeEEEEecCCc----eEEEEEEEEcC--CCceEEEecCEEEEeeCCccChHHHhhcccc
Confidence 3344556 99999999999987643 67888887421 2345678999999999976555666655553
No 68
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.48 E-value=4.3e-07 Score=101.73 Aligned_cols=41 Identities=24% Similarity=0.545 Sum_probs=36.8
Q ss_pred CCCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCCCC
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCAR 308 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~~~ 308 (781)
+..++||||||+|.+|+++|..|+++|++|+|+|+.+....
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 43 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGG 43 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccc
Confidence 45679999999999999999999999999999999876543
No 69
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.46 E-value=1.8e-07 Score=108.88 Aligned_cols=37 Identities=30% Similarity=0.416 Sum_probs=34.1
Q ss_pred CCcccEEEECCCchHHHHHHHHHhC------CCeEEEEcCCCC
Q 003990 269 VIKCDAVVVGSGSGGGLIAGVLAKA------GYKVLVLEKGSY 305 (781)
Q Consensus 269 ~~~~DVIVVGsG~~G~vaA~~LA~~------G~kVlVLEkG~~ 305 (781)
..+|||||||||++|+++|..|++. |++|+||||+..
T Consensus 33 ~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~ 75 (584)
T 2gmh_A 33 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAH 75 (584)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSS
T ss_pred ccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCC
Confidence 3569999999999999999999998 999999999864
No 70
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.44 E-value=8.7e-07 Score=98.56 Aligned_cols=65 Identities=18% Similarity=0.246 Sum_probs=49.9
Q ss_pred chHHH-hhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHHcCCCCC
Q 003990 450 WLVDL-VNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNA 526 (781)
Q Consensus 450 ~L~~a-~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~SGi~~p 526 (781)
++... .++| ++|++++.|++|..+++ ++.+|.+.+ + .++.|+.||+|+|..-+..++..+|+...
T Consensus 199 ~l~~~l~~~G-V~i~~~~~v~~i~~~~~----~v~~v~l~d---G----~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~ 264 (415)
T 3lxd_A 199 FYQAEHRAHG-VDLRTGAAMDCIEGDGT----KVTGVRMQD---G----SVIPADIVIVGIGIVPCVGALISAGASGG 264 (415)
T ss_dssp HHHHHHHHTT-CEEEETCCEEEEEESSS----BEEEEEESS---S----CEEECSEEEECSCCEESCHHHHHTTCCCS
T ss_pred HHHHHHHhCC-CEEEECCEEEEEEecCC----cEEEEEeCC---C----CEEEcCEEEECCCCccChHHHHhCCCCcC
Confidence 34443 4556 99999999999987654 788887652 2 26889999999998777788999998653
No 71
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.43 E-value=4.5e-07 Score=97.72 Aligned_cols=34 Identities=26% Similarity=0.483 Sum_probs=32.7
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
+|||||||+|++|+.+|..|++.|++|+|||+.+
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 5899999999999999999999999999999986
No 72
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.43 E-value=1.5e-06 Score=99.14 Aligned_cols=37 Identities=35% Similarity=0.527 Sum_probs=33.7
Q ss_pred CCCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.+.++||||||+|++|+++|..|+++|.+|+||||.+
T Consensus 9 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~ 45 (499)
T 2qa2_A 9 HRSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLP 45 (499)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4578999999999999999999999999999999976
No 73
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.42 E-value=2.9e-06 Score=97.33 Aligned_cols=38 Identities=21% Similarity=0.410 Sum_probs=35.2
Q ss_pred CCCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
+..++||||||+|++|+++|.+|++.|++|+|||++..
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~ 77 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPF 77 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 45679999999999999999999999999999999873
No 74
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.41 E-value=7.4e-07 Score=98.67 Aligned_cols=37 Identities=30% Similarity=0.342 Sum_probs=33.0
Q ss_pred CCCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
....|||||||+|++|+++|+.|+++|++|+||||.+
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~ 56 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVK 56 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 4467999999999999999999999999999999986
No 75
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.40 E-value=6.3e-07 Score=95.97 Aligned_cols=63 Identities=10% Similarity=0.042 Sum_probs=45.0
Q ss_pred chHHHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHH
Q 003990 450 WLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLL 518 (781)
Q Consensus 450 ~L~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LL 518 (781)
++....+..+++|++++.|++|..+++ ++.+|.+.+.. .++..++.++.||+|+|...++.++
T Consensus 214 ~~~~l~~~~gv~i~~~~~v~~i~~~~~----~~~~v~~~~~~--~g~~~~i~~D~vi~a~G~~p~~~~~ 276 (338)
T 3itj_A 214 MQKRAEKNEKIEILYNTVALEAKGDGK----LLNALRIKNTK--KNEETDLPVSGLFYAIGHTPATKIV 276 (338)
T ss_dssp HHHHHHHCTTEEEECSEEEEEEEESSS----SEEEEEEEETT--TTEEEEEECSEEEECSCEEECCGGG
T ss_pred HHHHHHhcCCeEEeecceeEEEEcccC----cEEEEEEEECC--CCceEEEEeCEEEEEeCCCCChhHh
Confidence 344444553499999999999987654 68888887532 2345678999999999975444443
No 76
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.39 E-value=3.9e-07 Score=97.78 Aligned_cols=35 Identities=26% Similarity=0.373 Sum_probs=32.8
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
++||||||+|++|+++|+.|+++|++|+||||...
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~ 36 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 47999999999999999999999999999999863
No 77
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.38 E-value=9.9e-07 Score=95.84 Aligned_cols=68 Identities=18% Similarity=0.115 Sum_probs=46.8
Q ss_pred chHHHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHHcCCC
Q 003990 450 WLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLK 524 (781)
Q Consensus 450 ~L~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~SGi~ 524 (781)
.+....+..+++|+++++|++|..+++ ++.+|.+.. .+++...+.++.||+|+|.-..+.+|..+|+.
T Consensus 207 ~l~~~~~~~gv~i~~~~~v~~i~~~~~----~v~~v~~~~---~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~ 274 (360)
T 3ab1_A 207 EVERARANGTIDVYLETEVASIEESNG----VLTRVHLRS---SDGSKWTVEADRLLILIGFKSNLGPLARWDLE 274 (360)
T ss_dssp SSHHHHHHTSEEEESSEEEEEEEEETT----EEEEEEEEE---TTCCEEEEECSEEEECCCBCCSCGGGGGSSCC
T ss_pred HHHHHhhcCceEEEcCcCHHHhccCCC----ceEEEEEEe---cCCCeEEEeCCEEEECCCCCCCHHHHHhhccc
Confidence 344433334499999999999987654 777888762 12345678999999999965444466555553
No 78
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.38 E-value=6.8e-07 Score=91.22 Aligned_cols=34 Identities=29% Similarity=0.382 Sum_probs=32.4
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
+|||||||+|.+|+.+|..|++.|.+|+|||++.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~ 36 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 36 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 5899999999999999999999999999999973
No 79
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.32 E-value=3e-07 Score=93.59 Aligned_cols=35 Identities=26% Similarity=0.373 Sum_probs=33.0
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
++||+|||||++|+++|+.|+++|++|+||||.+.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 48999999999999999999999999999999863
No 80
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.31 E-value=9.9e-07 Score=95.23 Aligned_cols=33 Identities=27% Similarity=0.499 Sum_probs=31.7
Q ss_pred ccEEEECCCchHHHHHHHHHh---CCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAK---AGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~---~G~kVlVLEkG~ 304 (781)
+||||||+|++|+++|+.|++ +|++|+|+||+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCC
Confidence 699999999999999999999 999999999986
No 81
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.30 E-value=3.8e-06 Score=93.03 Aligned_cols=65 Identities=22% Similarity=0.381 Sum_probs=49.6
Q ss_pred chHHH-hhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHHcCCCCC
Q 003990 450 WLVDL-VNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNA 526 (781)
Q Consensus 450 ~L~~a-~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~SGi~~p 526 (781)
++... .++| ++|++++.|++|..+++ ++.+|.+.+ + + ++.|+.||+|+|..-+..++..+|+...
T Consensus 189 ~l~~~l~~~G-V~i~~~~~v~~i~~~~~----~v~~V~~~d---G--~--~i~aD~Vv~a~G~~p~~~l~~~~gl~~~ 254 (404)
T 3fg2_P 189 YFHDRHSGAG-IRMHYGVRATEIAAEGD----RVTGVVLSD---G--N--TLPCDLVVVGVGVIPNVEIAAAAGLPTA 254 (404)
T ss_dssp HHHHHHHHTT-CEEECSCCEEEEEEETT----EEEEEEETT---S--C--EEECSEEEECCCEEECCHHHHHTTCCBS
T ss_pred HHHHHHHhCC-cEEEECCEEEEEEecCC----cEEEEEeCC---C--C--EEEcCEEEECcCCccCHHHHHhCCCCCC
Confidence 34443 3455 99999999999987654 788887652 2 2 6889999999998777788999998643
No 82
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.29 E-value=1.2e-06 Score=96.54 Aligned_cols=34 Identities=32% Similarity=0.629 Sum_probs=32.5
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
++||||||+|++|+++|..|++.|++|+||||.+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 35 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQT 35 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 5899999999999999999999999999999976
No 83
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.25 E-value=1.2e-05 Score=92.86 Aligned_cols=35 Identities=31% Similarity=0.397 Sum_probs=33.4
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.++||||||+|++|+++|..|++.|.+|+||||.+
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~ 59 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTD 59 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 46999999999999999999999999999999986
No 84
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.22 E-value=7.5e-07 Score=101.56 Aligned_cols=36 Identities=33% Similarity=0.385 Sum_probs=33.8
Q ss_pred CCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 269 VIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 269 ~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
...+||||||||++|+++|..|++.|++|+|||+.+
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~ 125 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRI 125 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEecc
Confidence 356899999999999999999999999999999986
No 85
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.21 E-value=1.2e-05 Score=89.77 Aligned_cols=60 Identities=20% Similarity=0.253 Sum_probs=44.9
Q ss_pred HhhCCCeEEecCcEEEEEEc--cCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHHcCCCC
Q 003990 454 LVNSGNSAILPGCEAIEVLH--KKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKN 525 (781)
Q Consensus 454 a~~~gn~~i~~~~~V~~I~~--~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~SGi~~ 525 (781)
..+.| ++|++++.|++|.. +++ ++.+|.+.+ + ..+.++.||+|+|..-...++..+|+..
T Consensus 201 l~~~G-V~i~~~~~v~~i~~~~~~~----~v~~v~~~~---G----~~i~~D~Vv~a~G~~p~~~l~~~~gl~~ 262 (431)
T 1q1r_A 201 HREAG-VDIRTGTQVCGFEMSTDQQ----KVTAVLCED---G----TRLPADLVIAGIGLIPNCELASAAGLQV 262 (431)
T ss_dssp HHHHT-CEEECSCCEEEEEECTTTC----CEEEEEETT---S----CEEECSEEEECCCEEECCHHHHHTTCCB
T ss_pred HHhCC-eEEEeCCEEEEEEeccCCC----cEEEEEeCC---C----CEEEcCEEEECCCCCcCcchhhccCCCC
Confidence 34556 99999999999986 433 666676532 2 2688999999999765667888888864
No 86
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.21 E-value=5.6e-06 Score=87.50 Aligned_cols=59 Identities=12% Similarity=0.065 Sum_probs=42.8
Q ss_pred chHHHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCH
Q 003990 450 WLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTP 515 (781)
Q Consensus 450 ~L~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp 515 (781)
++....+..+++|++++.|++|..+++ ++.+|.+.. .+++..++.++.||+|+|..-++
T Consensus 188 ~~~~~~~~~gv~~~~~~~v~~i~~~~~----~~~~v~~~~---~~g~~~~~~~D~vv~a~G~~p~~ 246 (315)
T 3r9u_A 188 TVEKVKKNEKIELITSASVDEVYGDKM----GVAGVKVKL---KDGSIRDLNVPGIFTFVGLNVRN 246 (315)
T ss_dssp HHHHHHHCTTEEEECSCEEEEEEEETT----EEEEEEEEC---TTSCEEEECCSCEEECSCEEECC
T ss_pred HHHHHHhcCCeEEEeCcEEEEEEcCCC----cEEEEEEEc---CCCCeEEeecCeEEEEEcCCCCc
Confidence 334444444599999999999987664 788888872 22355688999999999964333
No 87
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.19 E-value=7.6e-06 Score=86.63 Aligned_cols=32 Identities=25% Similarity=0.493 Sum_probs=31.1
Q ss_pred ccEEEECCCchHHHHHHHHHhCCC-eEEEEcCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKG 303 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG 303 (781)
|||||||+|++|+.+|..|++.|+ +|+|||+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC
Confidence 799999999999999999999999 99999995
No 88
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.18 E-value=8e-06 Score=97.64 Aligned_cols=37 Identities=30% Similarity=0.371 Sum_probs=34.3
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYC 306 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~ 306 (781)
..+||||||+|++|+++|+.|+++|++|+|||+.+..
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 371 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRI 371 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccce
Confidence 4689999999999999999999999999999998754
No 89
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.18 E-value=4.3e-06 Score=89.29 Aligned_cols=37 Identities=32% Similarity=0.442 Sum_probs=34.1
Q ss_pred CCCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
+...+||||||+|++|+.+|..|++.|++|+|||+..
T Consensus 5 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 41 (325)
T 2q7v_A 5 TAHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM 41 (325)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 4457999999999999999999999999999999973
No 90
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.16 E-value=4.7e-06 Score=88.81 Aligned_cols=35 Identities=20% Similarity=0.136 Sum_probs=33.1
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
..+||||||+|++|+.+|..|++.|++|+|||+.+
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 40 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLP 40 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 35899999999999999999999999999999986
No 91
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.13 E-value=5.5e-06 Score=93.70 Aligned_cols=63 Identities=13% Similarity=0.206 Sum_probs=44.8
Q ss_pred chHHHh-hCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHHcCCCC
Q 003990 450 WLVDLV-NSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKN 525 (781)
Q Consensus 450 ~L~~a~-~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~SGi~~ 525 (781)
.+...+ +.| ++|+++++|++|..+++ ++. |.+.+ + + ++.+|.||+|+|..-...|+..+|+..
T Consensus 207 ~l~~~l~~~G-V~i~~~~~v~~i~~~~~----~v~-v~~~~---g--~--~i~aD~Vv~a~G~~p~~~l~~~~gl~~ 270 (472)
T 3iwa_A 207 MLRHDLEKND-VVVHTGEKVVRLEGENG----KVA-RVITD---K--R--TLDADLVILAAGVSPNTQLARDAGLEL 270 (472)
T ss_dssp HHHHHHHHTT-CEEECSCCEEEEEESSS----BEE-EEEES---S--C--EEECSEEEECSCEEECCHHHHHHTCCB
T ss_pred HHHHHHHhcC-CEEEeCCEEEEEEccCC----eEE-EEEeC---C--C--EEEcCEEEECCCCCcCHHHHHhCCccC
Confidence 344443 455 99999999999987554 444 44431 2 2 688999999999876666888888863
No 92
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.13 E-value=4.6e-06 Score=93.92 Aligned_cols=36 Identities=28% Similarity=0.313 Sum_probs=33.9
Q ss_pred CcccEEEECCCchHHHHHHHHHhCC-----CeEEEEcCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAG-----YKVLVLEKGSY 305 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G-----~kVlVLEkG~~ 305 (781)
..|||||||+|++|+++|..|++.| .+|+|||+.+.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~ 69 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGD 69 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCC
Confidence 5699999999999999999999999 99999999874
No 93
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.12 E-value=8e-06 Score=86.43 Aligned_cols=32 Identities=28% Similarity=0.441 Sum_probs=30.5
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCeEEEEcC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEK 302 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEk 302 (781)
+|||||||+|++|+.+|..|++.|++|+|||+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~ 32 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE 32 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC
Confidence 48999999999999999999999999999985
No 94
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.07 E-value=2.1e-06 Score=91.03 Aligned_cols=35 Identities=23% Similarity=0.376 Sum_probs=32.8
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.+|||||||||++|++||.+|+++|++|+|+|++.
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 57999999999999999999999999999999975
No 95
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.05 E-value=1.8e-05 Score=88.87 Aligned_cols=36 Identities=19% Similarity=0.291 Sum_probs=33.3
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCC--eEEEEcCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGY--KVLVLEKGSY 305 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~--kVlVLEkG~~ 305 (781)
..+||+|||||++|+++|..|++.|. +|+|+|+.+.
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~ 42 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGS 42 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCC
Confidence 46899999999999999999999999 9999999763
No 96
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.04 E-value=1.2e-05 Score=92.75 Aligned_cols=37 Identities=30% Similarity=0.308 Sum_probs=34.3
Q ss_pred CCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 269 VIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 269 ~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
..++||||||+|++|+.+|.+|++.|++|+||||++.
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~ 50 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGD 50 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 3579999999999999999999999999999999863
No 97
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.03 E-value=9.4e-06 Score=93.48 Aligned_cols=36 Identities=42% Similarity=0.517 Sum_probs=33.8
Q ss_pred CCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 269 VIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 269 ~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
..++||||||+|.+|+.+|.+|++.|++|+|||+++
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~ 42 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGE 42 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 356999999999999999999999999999999986
No 98
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.03 E-value=3.1e-06 Score=89.94 Aligned_cols=35 Identities=29% Similarity=0.515 Sum_probs=33.3
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.+|||||||||++|+++|.+|++.|++|+|+||+.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 47999999999999999999999999999999975
No 99
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.00 E-value=8.8e-06 Score=93.38 Aligned_cols=35 Identities=26% Similarity=0.501 Sum_probs=32.6
Q ss_pred CcccEEEECCCchHHHHHHHHHh------------CCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAK------------AGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~------------~G~kVlVLEkG~ 304 (781)
..+||||||||++|+++|..|++ .|++|+|||+..
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 35899999999999999999999 999999999965
No 100
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.99 E-value=3.2e-06 Score=89.62 Aligned_cols=35 Identities=26% Similarity=0.265 Sum_probs=33.1
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
..|||||||||++|++||.+|++.|++|+|+|++.
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~ 37 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM 37 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 45999999999999999999999999999999975
No 101
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.97 E-value=9.4e-06 Score=93.55 Aligned_cols=36 Identities=31% Similarity=0.385 Sum_probs=33.4
Q ss_pred CCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 269 VIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 269 ~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
..++||||||+|.+|+.+|.+|++.|++|+|||+++
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~ 54 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAAS 54 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 356999999999999999999999999999999976
No 102
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.96 E-value=5.2e-05 Score=85.50 Aligned_cols=34 Identities=18% Similarity=0.327 Sum_probs=32.0
Q ss_pred ccEEEECCCchHHHHHHHHHh---CCCe---EEEEcCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAK---AGYK---VLVLEKGSY 305 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~---~G~k---VlVLEkG~~ 305 (781)
+||+|||||++|+++|..|++ .|++ |+|+|+.+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~ 42 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQAD 42 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCC
Confidence 699999999999999999999 9999 999999863
No 103
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=97.95 E-value=4e-06 Score=89.94 Aligned_cols=36 Identities=36% Similarity=0.470 Sum_probs=32.9
Q ss_pred CcccEEEECCCchHHHHHHHHHh--CCCeEEEEcCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAK--AGYKVLVLEKGSY 305 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~--~G~kVlVLEkG~~ 305 (781)
.++||+|||||++|++||++|++ .|++|+|+||+++
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~ 101 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 57999999999999999999985 4999999999864
No 104
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.90 E-value=7.3e-06 Score=94.31 Aligned_cols=35 Identities=31% Similarity=0.464 Sum_probs=33.1
Q ss_pred CcccEEEECCCchHHHHHHHHH-hCCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLA-KAGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA-~~G~kVlVLEkG~ 304 (781)
.++||||||||++|+.+|.+|+ +.|++|+|||+.+
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~ 42 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKAD 42 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCC
Confidence 5699999999999999999999 8999999999976
No 105
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.89 E-value=5.5e-06 Score=94.32 Aligned_cols=39 Identities=23% Similarity=0.327 Sum_probs=35.1
Q ss_pred CcccEEEECCCchHHHHHHHHHhC-CCeEEEEcCCCCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKA-GYKVLVLEKGSYCAR 308 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~-G~kVlVLEkG~~~~~ 308 (781)
.++||||||||++|++||++|+++ |++|+||||.+....
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG 48 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGG 48 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCG
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcC
Confidence 469999999999999999999985 999999999886543
No 106
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.84 E-value=9.1e-06 Score=93.30 Aligned_cols=38 Identities=32% Similarity=0.374 Sum_probs=34.8
Q ss_pred CCCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
.+.+||+||||+|+||.++|.++|+.|+||+|||+...
T Consensus 39 ~~ydYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~ 76 (542)
T 4b1b_A 39 HTYDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKP 76 (542)
T ss_dssp CCSSEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCeEEEEecccc
Confidence 45679999999999999999999999999999998763
No 107
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.84 E-value=9e-06 Score=90.43 Aligned_cols=35 Identities=49% Similarity=0.574 Sum_probs=32.9
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYC 306 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~ 306 (781)
|||||||||++|+++|++|+++|++|+|||+.+..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCc
Confidence 79999999999999999999999999999997643
No 108
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.79 E-value=6.1e-05 Score=86.27 Aligned_cols=34 Identities=26% Similarity=0.370 Sum_probs=31.9
Q ss_pred CCcccEEEECCCchHHHHHHHHHhCCCeEEEEcC
Q 003990 269 VIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEK 302 (781)
Q Consensus 269 ~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEk 302 (781)
...|||||||||++|+++|..|++.|++|+|+|+
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~ 243 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE 243 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC
Confidence 3579999999999999999999999999999986
No 109
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.79 E-value=9.7e-05 Score=85.86 Aligned_cols=37 Identities=30% Similarity=0.499 Sum_probs=33.9
Q ss_pred CcccEEEECCCchHHHHHHHHHhC--CCeEEEEcCCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKA--GYKVLVLEKGSYC 306 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~--G~kVlVLEkG~~~ 306 (781)
...||||||||++|+++|.+|++. |++|+|+|+.+..
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 73 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYI 73 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 357999999999999999999998 8999999999864
No 110
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.77 E-value=7.6e-05 Score=84.50 Aligned_cols=36 Identities=25% Similarity=0.381 Sum_probs=32.5
Q ss_pred cccEEEECCCchHHHHHHHHHhC--CCeEEEEcCCCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKA--GYKVLVLEKGSYC 306 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~--G~kVlVLEkG~~~ 306 (781)
.+||||||+|++|+.+|.+|++. |.+|+|||+.+..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 36999999999999999999996 8999999998754
No 111
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.75 E-value=6.7e-05 Score=92.17 Aligned_cols=65 Identities=14% Similarity=0.113 Sum_probs=46.5
Q ss_pred HHhhCCCeEEecCcEEEEEEcc-CCCCcceEEEEEEEEeeCC--ceeEEEEeccEEEEeccCCCCHHHHHHcC
Q 003990 453 DLVNSGNSAILPGCEAIEVLHK-KRRDRNVATGVAFEFQYMG--AKDICVVESKVTIVACGALSTPNLLKRSG 522 (781)
Q Consensus 453 ~a~~~gn~~i~~~~~V~~I~~~-~gg~~~ra~GV~~~~~~~g--~g~~~~i~Ak~VVLAaGai~Tp~LLl~SG 522 (781)
.+.+.| ++|++++.|++|..+ ++ ++.+|.+.+.+.. .++..++.++.||+|+|-.-+..++...|
T Consensus 325 ~l~~~G-V~v~~~~~v~~i~~~~~~----~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~~~ 392 (965)
T 2gag_A 325 QAVADG-VQVISGSVVVDTEADENG----ELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQRQ 392 (965)
T ss_dssp HHHHTT-CCEEETEEEEEEEECTTS----CEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHHTT
T ss_pred HHHhCC-eEEEeCCEeEEEeccCCC----CEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHhCC
Confidence 344566 999999999999864 33 6788887641010 13446789999999999766667777665
No 112
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.74 E-value=0.00015 Score=89.70 Aligned_cols=68 Identities=22% Similarity=0.234 Sum_probs=47.7
Q ss_pred HHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEee---CC-----ceeEEEEeccEEEEeccCC-CCHHHHHH-cC
Q 003990 453 DLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQY---MG-----AKDICVVESKVTIVACGAL-STPNLLKR-SG 522 (781)
Q Consensus 453 ~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~---~g-----~g~~~~i~Ak~VVLAaGai-~Tp~LLl~-SG 522 (781)
.+.+.| ++|++++.+++|..+++ ++++|++.... ++ .+...++.||.||+|.|.. .++.|+.. +|
T Consensus 379 ~~~~~G-v~~~~~~~~~~i~~~~g----~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~g 453 (1025)
T 1gte_A 379 LAKEEK-CEFLPFLSPRKVIVKGG----RIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSP 453 (1025)
T ss_dssp HHHHTT-CEEECSEEEEEEEEETT----EEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTT
T ss_pred HHHHcC-CEEEeCCCceEEEccCC----eEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccC
Confidence 445667 99999999999986544 78888775311 11 1234578999999999974 45667665 57
Q ss_pred CCC
Q 003990 523 LKN 525 (781)
Q Consensus 523 i~~ 525 (781)
+..
T Consensus 454 l~~ 456 (1025)
T 1gte_A 454 IKF 456 (1025)
T ss_dssp SCB
T ss_pred ceE
Confidence 753
No 113
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.73 E-value=7.8e-05 Score=82.61 Aligned_cols=64 Identities=19% Similarity=0.281 Sum_probs=47.0
Q ss_pred chHHHh-hCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHHcCCCCC
Q 003990 450 WLVDLV-NSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNA 526 (781)
Q Consensus 450 ~L~~a~-~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~SGi~~p 526 (781)
++.... ++| ++|++++.|++|..++ ++.+|.+.+ + .++.|+.||+|+|..-...++..+|+...
T Consensus 190 ~l~~~l~~~G-V~i~~~~~v~~i~~~~-----~~~~v~~~d---g----~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~ 254 (410)
T 3ef6_A 190 WLRGLLTELG-VQVELGTGVVGFSGEG-----QLEQVMASD---G----RSFVADSALICVGAEPADQLARQAGLACD 254 (410)
T ss_dssp HHHHHHHHHT-CEEECSCCEEEEECSS-----SCCEEEETT---S----CEEECSEEEECSCEEECCHHHHHTTCCBS
T ss_pred HHHHHHHHCC-CEEEeCCEEEEEeccC-----cEEEEEECC---C----CEEEcCEEEEeeCCeecHHHHHhCCCccC
Confidence 343433 455 9999999999997643 455666542 2 26889999999998777788999998643
No 114
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.71 E-value=2e-05 Score=87.16 Aligned_cols=39 Identities=38% Similarity=0.413 Sum_probs=35.5
Q ss_pred CCCcccEEEECCCchHHHHHHHHHhC-CCeEEEEcCCCCC
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAKA-GYKVLVLEKGSYC 306 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~~-G~kVlVLEkG~~~ 306 (781)
+..++||||||||++|+++|++|+++ |++|+|||+.+..
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 44579999999999999999999999 9999999998754
No 115
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.68 E-value=1.8e-05 Score=90.07 Aligned_cols=35 Identities=29% Similarity=0.453 Sum_probs=33.0
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.+|||||||||++|+++|.+|++.|++|+|||++.
T Consensus 7 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 7 INVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 35999999999999999999999999999999975
No 116
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.64 E-value=3.6e-05 Score=84.81 Aligned_cols=39 Identities=28% Similarity=0.473 Sum_probs=35.6
Q ss_pred CCCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCC
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYC 306 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~ 306 (781)
....+||+|||+|++|+++|++|+++|++|+|||+.+..
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 346799999999999999999999999999999998754
No 117
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.63 E-value=3.2e-05 Score=87.74 Aligned_cols=38 Identities=32% Similarity=0.397 Sum_probs=34.7
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCA 307 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~~ 307 (781)
.++||||||+|++|+++|+.|+++|++|+|||+.+...
T Consensus 38 ~~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~G 75 (495)
T 2vvm_A 38 GPWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIG 75 (495)
T ss_dssp CCEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSB
T ss_pred cCCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 45899999999999999999999999999999987543
No 118
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.61 E-value=0.0001 Score=83.98 Aligned_cols=64 Identities=16% Similarity=0.144 Sum_probs=41.6
Q ss_pred hhhhchHHHhhCCCeEEecCcEEEEEEccCCCC-cc--eEEEEEEEEeeCCceeEEEEeccEEEEeccC
Q 003990 446 TSETWLVDLVNSGNSAILPGCEAIEVLHKKRRD-RN--VATGVAFEFQYMGAKDICVVESKVTIVACGA 511 (781)
Q Consensus 446 ~~~~~L~~a~~~gn~~i~~~~~V~~I~~~~gg~-~~--ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGa 511 (781)
-...||..++++=+..|.++++|++|...+.+. .. ...-|.+.+ ..+++..++.|+.||+|+|.
T Consensus 146 E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~--~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 146 EFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRN--VETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEE--TTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEec--CCCceEEEEEeCEEEECcCC
Confidence 345677776655336789999999998654211 11 123344443 33456778999999999994
No 119
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.61 E-value=3.4e-05 Score=88.24 Aligned_cols=37 Identities=43% Similarity=0.622 Sum_probs=34.3
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYC 306 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~ 306 (781)
.++||||||||++|+++|++|+++|++|+|||+.+..
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 39 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRV 39 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 3579999999999999999999999999999998754
No 120
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.61 E-value=3.3e-05 Score=84.40 Aligned_cols=36 Identities=42% Similarity=0.474 Sum_probs=33.5
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYC 306 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~ 306 (781)
++||+|||+|++|+++|++|+++|++|+|+|+++..
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 379999999999999999999999999999998754
No 121
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.60 E-value=3.5e-05 Score=84.83 Aligned_cols=36 Identities=31% Similarity=0.587 Sum_probs=33.6
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
.++||||||+|++|+++|..|+++|++|+||||.+.
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~ 40 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARR 40 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 368999999999999999999999999999999863
No 122
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.59 E-value=3.6e-05 Score=85.21 Aligned_cols=35 Identities=37% Similarity=0.447 Sum_probs=33.0
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCe-EEEEcCCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYK-VLVLEKGSY 305 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~k-VlVLEkG~~ 305 (781)
++||||||+|++|+++|..|+++|.+ |+||||.+.
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~ 39 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSE 39 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 58999999999999999999999999 999999763
No 123
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.59 E-value=5.9e-05 Score=82.40 Aligned_cols=37 Identities=27% Similarity=0.389 Sum_probs=34.1
Q ss_pred CCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCC-CC
Q 003990 269 VIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKG-SY 305 (781)
Q Consensus 269 ~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG-~~ 305 (781)
...+||+|||+|++|+++|+.|+++|++|+|+|+. +.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~ 79 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANR 79 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccc
Confidence 35689999999999999999999999999999998 54
No 124
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.59 E-value=3.9e-05 Score=86.92 Aligned_cols=36 Identities=28% Similarity=0.307 Sum_probs=33.1
Q ss_pred CCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 269 VIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 269 ~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
..+|||||||+|++|+++|.+|++.|++|+||||+.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 42 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVK 42 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 357999999999999999999999999999999643
No 125
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.59 E-value=4e-05 Score=83.80 Aligned_cols=35 Identities=34% Similarity=0.333 Sum_probs=33.2
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
.+||||||+|++|+++|..|++.|++|+||||.+.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~ 45 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSE 45 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 58999999999999999999999999999999863
No 126
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.58 E-value=3.6e-05 Score=86.82 Aligned_cols=40 Identities=25% Similarity=0.317 Sum_probs=33.8
Q ss_pred CCCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCCC
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCA 307 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~~ 307 (781)
....+||||||||++|+++|+.|+++|++|+|||+.+...
T Consensus 13 ~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~G 52 (478)
T 2ivd_A 13 RTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLG 52 (478)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSB
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCC
Confidence 4467899999999999999999999999999999987543
No 127
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.58 E-value=4.1e-05 Score=86.85 Aligned_cols=35 Identities=34% Similarity=0.459 Sum_probs=32.9
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.+|||||||||++|+++|.+|++.|++|+||||+.
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 59 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEYR 59 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCCC
Confidence 46999999999999999999999999999999953
No 128
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.57 E-value=5.7e-05 Score=85.54 Aligned_cols=41 Identities=39% Similarity=0.384 Sum_probs=36.4
Q ss_pred CCCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCCCC
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCAR 308 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~~~ 308 (781)
+...+||||||||++|+++|+.|+++|++|+|||+.+....
T Consensus 8 ~~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG 48 (489)
T 2jae_A 8 VKGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGG 48 (489)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCC
Confidence 34578999999999999999999999999999999876543
No 129
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.57 E-value=3.2e-05 Score=87.41 Aligned_cols=35 Identities=37% Similarity=0.503 Sum_probs=33.3
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.+|||||||||++|+++|.+|++.|++|+||||++
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 36 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYK 36 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 46999999999999999999999999999999986
No 130
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.56 E-value=4.6e-05 Score=83.95 Aligned_cols=36 Identities=25% Similarity=0.393 Sum_probs=33.6
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
.++||||||+|++|+++|..|++.|++|+||||.+.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDND 60 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 468999999999999999999999999999999863
No 131
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.55 E-value=0.00042 Score=79.97 Aligned_cols=35 Identities=20% Similarity=0.471 Sum_probs=32.4
Q ss_pred ccEEEECCCchHHHHHHHHHhC--CCeEEEEcCCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKA--GYKVLVLEKGSYC 306 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~--G~kVlVLEkG~~~ 306 (781)
.||||||+|++|+.+|.+|++. |++|+|+|+.++.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 3899999999999999999998 8999999999864
No 132
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.55 E-value=5.9e-05 Score=83.63 Aligned_cols=37 Identities=22% Similarity=0.326 Sum_probs=34.3
Q ss_pred CcccEEEECCCchHHHHHHHHHhCC-CeEEEEcCCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAG-YKVLVLEKGSYC 306 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G-~kVlVLEkG~~~ 306 (781)
..+||||||||++|+++|++|+++| ++|+|+|+.+..
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHV 42 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCC
Confidence 4689999999999999999999999 999999998764
No 133
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.54 E-value=4.7e-05 Score=85.91 Aligned_cols=36 Identities=42% Similarity=0.490 Sum_probs=33.2
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
.+|||||||||++|+++|.+|++.|++|+||||.+.
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~ 38 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGE 38 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSS
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCC
Confidence 469999999999999999999999999999997654
No 134
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.51 E-value=6.2e-05 Score=82.85 Aligned_cols=35 Identities=31% Similarity=0.287 Sum_probs=33.1
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
..+||||||+|++|+++|..|+++|++|+|+||.+
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 38 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSP 38 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 35899999999999999999999999999999976
No 135
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.50 E-value=5.1e-05 Score=86.70 Aligned_cols=38 Identities=29% Similarity=0.415 Sum_probs=34.8
Q ss_pred CcccEEEECCCchHHHHHHHHHhCC-CeEEEEcCCCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAG-YKVLVLEKGSYCA 307 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G-~kVlVLEkG~~~~ 307 (781)
..+||||||||++|+++|++|+++| ++|+|||+.+...
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riG 45 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVG 45 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSB
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCC
Confidence 4689999999999999999999999 9999999987543
No 136
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.50 E-value=6.1e-05 Score=84.28 Aligned_cols=38 Identities=34% Similarity=0.490 Sum_probs=34.8
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCA 307 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~~ 307 (781)
.++||||||+|++|+++|++|+++|++|+|||+.+...
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~G 41 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVG 41 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCC
Confidence 46899999999999999999999999999999987543
No 137
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.50 E-value=4e-05 Score=82.78 Aligned_cols=32 Identities=22% Similarity=0.171 Sum_probs=30.8
Q ss_pred cEEEECCCchHHHHHHHHHhCC------CeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAG------YKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G------~kVlVLEkG~ 304 (781)
||||||||++|+++|+.|+++| ++|+||||+.
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 8999999999999999999998 9999999986
No 138
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.49 E-value=4.1e-05 Score=85.87 Aligned_cols=37 Identities=22% Similarity=0.245 Sum_probs=34.0
Q ss_pred cccEEEECCCchHHHHHHHHHhCC------CeEEEEcCCCCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAG------YKVLVLEKGSYCA 307 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G------~kVlVLEkG~~~~ 307 (781)
.+||||||||++|+++|++|+++| ++|+|||+.+...
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~G 47 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVG 47 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCC
Confidence 589999999999999999999999 9999999986543
No 139
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.49 E-value=6.6e-05 Score=85.31 Aligned_cols=40 Identities=25% Similarity=0.222 Sum_probs=34.7
Q ss_pred CCCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCCC
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCA 307 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~~ 307 (781)
+...+||||||||++|+++|+.|+++|++|+|||+.+...
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~G 49 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAG 49 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSC
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCC
Confidence 3456899999999999999999999999999999987653
No 140
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.49 E-value=5.7e-05 Score=85.08 Aligned_cols=35 Identities=29% Similarity=0.336 Sum_probs=32.8
Q ss_pred ccEEEECCCchHHHHHHHHHhCCC--eEEEEcCCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGY--KVLVLEKGSYC 306 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~--kVlVLEkG~~~ 306 (781)
+||||||||++|+++|++|+++|+ +|+|||+.+..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 699999999999999999999999 99999997654
No 141
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.49 E-value=5.8e-05 Score=85.06 Aligned_cols=35 Identities=34% Similarity=0.429 Sum_probs=32.7
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.+|||||||||++|+++|.+|++.|++|+||||+.
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~~ 38 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEFR 38 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 36999999999999999999999999999999953
No 142
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.49 E-value=5e-05 Score=84.76 Aligned_cols=35 Identities=23% Similarity=0.280 Sum_probs=32.0
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
..+||||||+|++|+++|..|+++|++|+||||..
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 45899999999999999999999999999999975
No 143
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.48 E-value=6.8e-05 Score=78.36 Aligned_cols=34 Identities=26% Similarity=0.446 Sum_probs=32.3
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.+||+|||+|++|+.+|..|++.|++|+|+|++.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 4899999999999999999999999999999975
No 144
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.47 E-value=6.5e-05 Score=85.27 Aligned_cols=36 Identities=44% Similarity=0.567 Sum_probs=32.5
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
.+|||||||||++|+++|.+|++.|++|+||||.+.
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~ 59 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRST 59 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 469999999999999999999999999999998754
No 145
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.47 E-value=7.6e-05 Score=85.41 Aligned_cols=37 Identities=35% Similarity=0.455 Sum_probs=34.0
Q ss_pred CCCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
+..+|||||||+|++|+++|.+|++.|++|+||||.+
T Consensus 29 ~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 29 KSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 3457999999999999999999999999999999964
No 146
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.46 E-value=8.2e-05 Score=72.08 Aligned_cols=33 Identities=52% Similarity=0.703 Sum_probs=32.0
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
|||+|||+|++|+.+|..|++.|.+|+|||+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 799999999999999999999999999999986
No 147
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.45 E-value=8.2e-05 Score=79.50 Aligned_cols=35 Identities=17% Similarity=0.245 Sum_probs=33.2
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
..+||||||+|++|+.+|..|++.|++|+|+|+.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 38 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLP 38 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 46999999999999999999999999999999976
No 148
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.43 E-value=6.6e-05 Score=84.93 Aligned_cols=36 Identities=36% Similarity=0.453 Sum_probs=33.7
Q ss_pred CCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 269 VIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 269 ~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
..+|||||||+|++|+++|.+|++.|++|+|||++.
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~ 53 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESHK 53 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 357999999999999999999999999999999875
No 149
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.42 E-value=8e-05 Score=84.50 Aligned_cols=35 Identities=37% Similarity=0.401 Sum_probs=32.8
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.+|||||||||++|+++|.+|++.|++|+||||.+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 57999999999999999999999999999999843
No 150
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.38 E-value=0.0001 Score=83.12 Aligned_cols=35 Identities=31% Similarity=0.480 Sum_probs=33.1
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.+|||||||+|++|+++|.+|++.|++|+|+|++.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA 37 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 46999999999999999999999999999999984
No 151
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.37 E-value=9.7e-05 Score=83.67 Aligned_cols=38 Identities=34% Similarity=0.404 Sum_probs=34.6
Q ss_pred CCCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
|..+|||||||+|++|+++|.+|++.|++|+|||+.+.
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~ 40 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKT 40 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSC
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 44579999999999999999999999999999999654
No 152
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.37 E-value=8.7e-05 Score=84.29 Aligned_cols=33 Identities=33% Similarity=0.356 Sum_probs=31.2
Q ss_pred CcccEEEECCCchHHHHHHHHHh-CCCeEEEEcC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAK-AGYKVLVLEK 302 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~-~G~kVlVLEk 302 (781)
.+|||||||||++|+++|++|++ .|++|+|||+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 36999999999999999999999 9999999994
No 153
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.36 E-value=0.0001 Score=85.52 Aligned_cols=44 Identities=27% Similarity=0.456 Sum_probs=39.8
Q ss_pred CCCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCCCCCCc
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCARSNL 311 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~~~~~~ 311 (781)
+..+|||||||+|..|+++|..|++.|+|||+|||.+++....+
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~ 48 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWA 48 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccc
Confidence 45689999999999999999999999999999999999876543
No 154
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.36 E-value=0.00011 Score=84.37 Aligned_cols=35 Identities=23% Similarity=0.397 Sum_probs=32.8
Q ss_pred CcccEEEECCCchHHHHHHHHHh---CCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAK---AGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~---~G~kVlVLEkG~ 304 (781)
..+||||||||++|+++|+.|++ .|++|+|||+..
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 45899999999999999999999 999999999965
No 155
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.35 E-value=9.9e-05 Score=82.84 Aligned_cols=35 Identities=29% Similarity=0.357 Sum_probs=33.1
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.+|||||||+|++|+++|.+|++.|++|+|+|++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE 37 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 46999999999999999999999999999999985
No 156
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.35 E-value=0.00011 Score=86.43 Aligned_cols=36 Identities=25% Similarity=0.430 Sum_probs=33.8
Q ss_pred CCcccEEEECCCchHHHHHHHHHh-CCCeEEEEcCCC
Q 003990 269 VIKCDAVVVGSGSGGGLIAGVLAK-AGYKVLVLEKGS 304 (781)
Q Consensus 269 ~~~~DVIVVGsG~~G~vaA~~LA~-~G~kVlVLEkG~ 304 (781)
..++||||||+|++|+++|..|++ .|.+|+||||.+
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~ 66 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKE 66 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSS
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 357999999999999999999999 999999999976
No 157
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.34 E-value=9.7e-05 Score=79.16 Aligned_cols=36 Identities=33% Similarity=0.294 Sum_probs=33.2
Q ss_pred CCCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCC
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKG 303 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG 303 (781)
+...+||||||+|++|+++|..|++.|++|+|+|+.
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 46 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT 46 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 345799999999999999999999999999999975
No 158
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.34 E-value=0.00013 Score=82.26 Aligned_cols=35 Identities=26% Similarity=0.372 Sum_probs=33.0
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.++||||||+|++|+++|.+|++.|++|+|||++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 37 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT 37 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 46899999999999999999999999999999984
No 159
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.33 E-value=0.00013 Score=82.23 Aligned_cols=35 Identities=34% Similarity=0.462 Sum_probs=33.1
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
+|||||||+|++|+++|.+|++.|++|+|+|+.+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~ 36 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGA 36 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 58999999999999999999999999999999864
No 160
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.32 E-value=0.00012 Score=82.86 Aligned_cols=35 Identities=37% Similarity=0.462 Sum_probs=33.3
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.+|||||||+|++|+++|.+|++.|++|+|||++.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 47999999999999999999999999999999975
No 161
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.32 E-value=9.9e-05 Score=83.41 Aligned_cols=36 Identities=28% Similarity=0.410 Sum_probs=33.4
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
.+|||||||+|++|+++|.+|++.|++|+|||+.+.
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~ 39 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGK 39 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 469999999999999999999999999999999653
No 162
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.30 E-value=0.00015 Score=78.71 Aligned_cols=34 Identities=29% Similarity=0.292 Sum_probs=32.3
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
+||||||+|.+|+.+|..||++|++|+|+|+.+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 6999999999999999999999999999999863
No 163
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.30 E-value=0.00012 Score=82.58 Aligned_cols=36 Identities=28% Similarity=0.258 Sum_probs=33.3
Q ss_pred cccEEEECCCchHHHHHHHHHhCC--CeEEEEcCCCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAG--YKVLVLEKGSYC 306 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G--~kVlVLEkG~~~ 306 (781)
.+||||||+|++|+++|++|+++| ++|+|||+.+..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~ 41 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERL 41 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCC
Confidence 589999999999999999999999 999999997653
No 164
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.27 E-value=9.6e-05 Score=84.28 Aligned_cols=34 Identities=29% Similarity=0.461 Sum_probs=30.8
Q ss_pred cccEEEECCCchHHHHHHHHHh---CCCeEEEEcCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAK---AGYKVLVLEKGS 304 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~---~G~kVlVLEkG~ 304 (781)
.+||||||||++|+++|+.|++ +|++|+|||+..
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 3799999999999999999999 999999999975
No 165
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.27 E-value=0.00015 Score=81.36 Aligned_cols=35 Identities=40% Similarity=0.476 Sum_probs=32.9
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
+|||||||+|++|+++|.+|++.|++|+|||+.+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~ 35 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKA 35 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 48999999999999999999999999999999854
No 166
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.27 E-value=0.00016 Score=82.36 Aligned_cols=34 Identities=38% Similarity=0.502 Sum_probs=32.6
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
+|||||||+|++|+.+|.+|++.|++|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4899999999999999999999999999999985
No 167
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.27 E-value=0.00016 Score=78.28 Aligned_cols=34 Identities=32% Similarity=0.556 Sum_probs=32.5
Q ss_pred cccEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
++||||||+|++|+.+|..|++.|+ +|+|||+.+
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC
Confidence 5899999999999999999999999 999999975
No 168
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.26 E-value=0.00014 Score=79.55 Aligned_cols=33 Identities=27% Similarity=0.459 Sum_probs=31.4
Q ss_pred cEEEECCCchHHHHHHHHHhC--CCeEEEEcCCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKA--GYKVLVLEKGSY 305 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~--G~kVlVLEkG~~ 305 (781)
||||||+|++|+++|..|+++ |++|+||||.+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~ 36 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDE 36 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 899999999999999999999 999999999864
No 169
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.26 E-value=0.0002 Score=78.43 Aligned_cols=32 Identities=38% Similarity=0.584 Sum_probs=30.7
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.|+|||+|++|+++|..|+++|++|+|+||.+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~ 34 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNS 34 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 59999999999999999999999999999975
No 170
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.25 E-value=0.00012 Score=77.60 Aligned_cols=34 Identities=21% Similarity=0.271 Sum_probs=32.0
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKG 303 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG 303 (781)
..+||||||+|++|+++|..|++.|++|+|+|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC
Confidence 4689999999999999999999999999999975
No 171
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.24 E-value=0.00019 Score=78.79 Aligned_cols=36 Identities=25% Similarity=0.455 Sum_probs=33.6
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYC 306 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~ 306 (781)
++||+|||+|++|+++|++|+++|++|+|+|+.+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHI 38 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCc
Confidence 479999999999999999999999999999998754
No 172
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.24 E-value=0.00016 Score=81.53 Aligned_cols=36 Identities=39% Similarity=0.602 Sum_probs=33.9
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
.+|||||||+|++|+++|.+|++.|++|+|||+.+.
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~ 40 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNET 40 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 569999999999999999999999999999999864
No 173
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.24 E-value=0.00018 Score=81.49 Aligned_cols=39 Identities=38% Similarity=0.345 Sum_probs=35.1
Q ss_pred CCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCCC
Q 003990 269 VIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCA 307 (781)
Q Consensus 269 ~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~~ 307 (781)
...+||||||+|++|+.+|+.|++.|++|+|||+.+...
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~g 69 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPG 69 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSB
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCC
Confidence 346899999999999999999999999999999987543
No 174
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.21 E-value=0.00018 Score=80.81 Aligned_cols=35 Identities=43% Similarity=0.651 Sum_probs=32.8
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.+|||||||+|++|+++|.+|++.|++|+|+|+..
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 36 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGN 36 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 35899999999999999999999999999999973
No 175
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.21 E-value=0.00016 Score=77.14 Aligned_cols=33 Identities=30% Similarity=0.309 Sum_probs=31.6
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEK 302 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEk 302 (781)
..+||||||+|++|+++|..|++.|++|+|||+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEec
Confidence 468999999999999999999999999999998
No 176
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.20 E-value=0.00016 Score=82.10 Aligned_cols=35 Identities=34% Similarity=0.407 Sum_probs=32.5
Q ss_pred CCCcccEEEECCCchHHHHHHHHHh-CCCeEEEEcC
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAK-AGYKVLVLEK 302 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~-~G~kVlVLEk 302 (781)
|..+|||||||||++|+++|.+|++ .|++|+|||+
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 4557999999999999999999999 9999999993
No 177
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.20 E-value=0.00019 Score=80.75 Aligned_cols=34 Identities=32% Similarity=0.454 Sum_probs=32.4
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
+|||||||+|++|+++|.+|++.|++|+|+|+..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~ 36 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY 36 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 5899999999999999999999999999999973
No 178
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.20 E-value=0.00018 Score=81.12 Aligned_cols=37 Identities=32% Similarity=0.459 Sum_probs=34.1
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYC 306 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~ 306 (781)
.+|||||||+|++|+++|.+|++.|++|+|+|+.+..
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGAL 41 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 4699999999999999999999999999999998643
No 179
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.19 E-value=0.00022 Score=82.21 Aligned_cols=36 Identities=22% Similarity=0.325 Sum_probs=33.3
Q ss_pred CcccEEEECCCchHHHHHHHHHh---CCCeEEEEcCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAK---AGYKVLVLEKGSY 305 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~---~G~kVlVLEkG~~ 305 (781)
..+||||||||++|+++|..|++ .|.+|+|||+...
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 46899999999999999999999 9999999999753
No 180
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.18 E-value=0.00024 Score=80.47 Aligned_cols=37 Identities=22% Similarity=0.188 Sum_probs=34.1
Q ss_pred CcccEEEECCCchHHHHHHHHHhCC-CeEEEEcCCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAG-YKVLVLEKGSYC 306 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G-~kVlVLEkG~~~ 306 (781)
..+||+|||||++|+++|++|+++| .+|+|+|+.+..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 4689999999999999999999998 899999998754
No 181
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.14 E-value=0.00018 Score=81.73 Aligned_cols=34 Identities=26% Similarity=0.291 Sum_probs=32.5
Q ss_pred cccEEEECCCchHHHHHHHHHhC---CCeEEEEcCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKA---GYKVLVLEKGS 304 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~---G~kVlVLEkG~ 304 (781)
+|||||||||++|+++|.+|++. |++|+|||++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 48999999999999999999998 99999999986
No 182
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.12 E-value=0.00024 Score=79.89 Aligned_cols=35 Identities=23% Similarity=0.428 Sum_probs=32.8
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.+|||||||+|++|+.+|.+|++.|++|+|+|++.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 38 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQA 38 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccCC
Confidence 56999999999999999999999999999999954
No 183
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.10 E-value=0.00028 Score=79.44 Aligned_cols=34 Identities=41% Similarity=0.597 Sum_probs=32.9
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
+|||||||+|++|+.+|.+|++.|++|+|+|++.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 6999999999999999999999999999999986
No 184
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.08 E-value=0.00035 Score=82.73 Aligned_cols=39 Identities=31% Similarity=0.403 Sum_probs=35.3
Q ss_pred CCCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCC
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYC 306 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~ 306 (781)
....+||||||+|++|+.+|+.|++.|++|+|+|+++..
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~ 426 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDL 426 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 345689999999999999999999999999999998743
No 185
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.07 E-value=0.0003 Score=82.83 Aligned_cols=35 Identities=37% Similarity=0.657 Sum_probs=33.0
Q ss_pred CcccEEEECCCchHHHHHHHHHh-----CCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAK-----AGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~-----~G~kVlVLEkG~ 304 (781)
.++||||||+|++|+++|..|++ .|++|+||||.+
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~ 46 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRS 46 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCC
Confidence 36899999999999999999999 999999999975
No 186
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.04 E-value=0.00036 Score=78.64 Aligned_cols=37 Identities=32% Similarity=0.431 Sum_probs=33.0
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCC-eEEEEcCCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGSYC 306 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~~~ 306 (781)
..+||+|||+|++|+++|+.|++.|+ +|+|+|+++..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~ 40 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHI 40 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCC
Confidence 35899999999999999999999998 89999998754
No 187
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.99 E-value=0.00042 Score=77.88 Aligned_cols=37 Identities=27% Similarity=0.374 Sum_probs=34.2
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYC 306 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~ 306 (781)
..+||+|||||++|+.+|..|++.|++|+|+|+.+..
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRM 157 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCC
Confidence 4689999999999999999999999999999998753
No 188
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.99 E-value=0.00042 Score=80.62 Aligned_cols=34 Identities=38% Similarity=0.450 Sum_probs=32.3
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKG 303 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG 303 (781)
..|||||||||++|+++|.+|++.|++|+|+|+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 5699999999999999999999999999999984
No 189
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.88 E-value=0.00062 Score=74.51 Aligned_cols=35 Identities=20% Similarity=0.304 Sum_probs=31.2
Q ss_pred CcccEEEECCCchHHHHHHHHHhCC--CeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAG--YKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G--~kVlVLEkG~ 304 (781)
.++||||||+|++|+++|.+|++.| .+|+|+|+..
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 3589999999999999999999998 5699999875
No 190
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.85 E-value=0.00057 Score=76.56 Aligned_cols=34 Identities=18% Similarity=0.190 Sum_probs=32.1
Q ss_pred ccEEEECCCchHHHHHHHHHhC--CCeEEEEcCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKA--GYKVLVLEKGSY 305 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~--G~kVlVLEkG~~ 305 (781)
+||||||+|++|+.+|.+|++. |++|+|||+.+.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDN 36 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 5999999999999999999998 999999999875
No 191
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.78 E-value=0.0065 Score=66.29 Aligned_cols=33 Identities=24% Similarity=0.361 Sum_probs=31.0
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-+++|||+|..|+-+|..|++.|.+|.|+|+++
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 178 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCE 178 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCc
Confidence 469999999999999999999999999999976
No 192
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.75 E-value=0.0011 Score=79.02 Aligned_cols=38 Identities=29% Similarity=0.441 Sum_probs=34.7
Q ss_pred CCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCC
Q 003990 269 VIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYC 306 (781)
Q Consensus 269 ~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~ 306 (781)
...+||+|||||++|+.+|..|++.|++|+|+|+.+..
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~ 424 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKI 424 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 34689999999999999999999999999999998754
No 193
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.74 E-value=0.00084 Score=75.22 Aligned_cols=35 Identities=17% Similarity=0.179 Sum_probs=32.7
Q ss_pred ccEEEECCCchHHHHHHHHHhC--CCeEEEEcCCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKA--GYKVLVLEKGSYC 306 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~--G~kVlVLEkG~~~ 306 (781)
.||||||+|++|+++|.+|++. |++|+|||+++..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 39 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATV 39 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 5999999999999999999998 8999999999864
No 194
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.72 E-value=0.0013 Score=77.70 Aligned_cols=38 Identities=32% Similarity=0.300 Sum_probs=34.7
Q ss_pred CCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCC
Q 003990 269 VIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYC 306 (781)
Q Consensus 269 ~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~ 306 (781)
...+||||||+|++|+.+|..|++.|++|+|+|+.++.
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~ 408 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEI 408 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 34689999999999999999999999999999998754
No 195
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.72 E-value=0.00087 Score=72.98 Aligned_cols=35 Identities=31% Similarity=0.437 Sum_probs=32.0
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYC 306 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~ 306 (781)
-.||||||+|++|+.+|.+|++.| +|+|+|++++.
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCC
Confidence 469999999999999999999999 99999998753
No 196
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.72 E-value=0.00095 Score=75.75 Aligned_cols=39 Identities=15% Similarity=0.233 Sum_probs=34.5
Q ss_pred CCCcccEEEECCCchHHHHHHHHHhC--CCeEEEEcCCCCC
Q 003990 268 LVIKCDAVVVGSGSGGGLIAGVLAKA--GYKVLVLEKGSYC 306 (781)
Q Consensus 268 ~~~~~DVIVVGsG~~G~vaA~~LA~~--G~kVlVLEkG~~~ 306 (781)
+...+||||||+|++|+.+|..|.+. |.+|+|||+.++.
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPEL 48 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSC
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 44679999999999999999999876 8999999998754
No 197
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.71 E-value=0.0011 Score=78.08 Aligned_cols=38 Identities=26% Similarity=0.321 Sum_probs=34.8
Q ss_pred CCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCC
Q 003990 269 VIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYC 306 (781)
Q Consensus 269 ~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~ 306 (781)
...+||+|||+|++|+++|+.|+++|++|+|+|+.+..
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 142 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 45689999999999999999999999999999998754
No 198
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=96.66 E-value=0.0074 Score=67.72 Aligned_cols=33 Identities=24% Similarity=0.326 Sum_probs=31.1
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-.++|||+|..|+-+|..|++.|.+|.|+|+++
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 202 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMP 202 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCC
Confidence 379999999999999999999999999999976
No 199
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.63 E-value=0.00073 Score=76.67 Aligned_cols=59 Identities=17% Similarity=0.021 Sum_probs=43.7
Q ss_pred HHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHHcCCC
Q 003990 453 DLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLK 524 (781)
Q Consensus 453 ~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~SGi~ 524 (781)
.+.+.| ++|++++.|++|..++ ++.+|... ++ .++.||.||+|+|..-+..|+..+|+.
T Consensus 266 ~l~~~G-V~v~~~~~v~~i~~~~-----~v~~v~~~---~g----~~i~aD~Vv~a~G~~p~~~l~~~~g~~ 324 (493)
T 1y56_A 266 ELERWG-IDYVHIPNVKRVEGNE-----KVERVIDM---NN----HEYKVDALIFADGRRPDINPITQAGGK 324 (493)
T ss_dssp HHHHHT-CEEEECSSEEEEECSS-----SCCEEEET---TC----CEEECSEEEECCCEEECCHHHHHTTCC
T ss_pred HHHhCC-cEEEeCCeeEEEecCC-----ceEEEEeC---CC----eEEEeCEEEECCCcCcCchHHHhcCCC
Confidence 344566 9999999999997543 34455432 12 368999999999987677789888875
No 200
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.63 E-value=0.0012 Score=73.92 Aligned_cols=63 Identities=13% Similarity=0.111 Sum_probs=45.0
Q ss_pred hchHHHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHHcCCCC
Q 003990 449 TWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKN 525 (781)
Q Consensus 449 ~~L~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~SGi~~ 525 (781)
..+...++.. +++++++.|++|..++ ++..|. . ++ .++.++.||+|+|..-+..+|...|+..
T Consensus 194 ~~l~~~l~~~-v~i~~~~~v~~i~~~~-----~v~~v~-~---~g----~~i~~D~Vv~a~G~~p~~~l~~~~gl~~ 256 (449)
T 3kd9_A 194 DILEEKLKKH-VNLRLQEITMKIEGEE-----RVEKVV-T---DA----GEYKAELVILATGIKPNIELAKQLGVRI 256 (449)
T ss_dssp HHHHHHHTTT-SEEEESCCEEEEECSS-----SCCEEE-E---TT----EEEECSEEEECSCEEECCHHHHHTTCCB
T ss_pred HHHHHHHHhC-cEEEeCCeEEEEeccC-----cEEEEE-e---CC----CEEECCEEEEeeCCccCHHHHHhCCccC
Confidence 4455566667 9999999999997543 333332 1 12 3688999999999876667888888863
No 201
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.63 E-value=0.0013 Score=73.15 Aligned_cols=35 Identities=29% Similarity=0.426 Sum_probs=32.5
Q ss_pred ccEEEECCCchHHHHHHHHHh--CCCeEEEEcCCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAK--AGYKVLVLEKGSYC 306 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~--~G~kVlVLEkG~~~ 306 (781)
.||||||+|.+|+.+|..|++ .|++|+|||+.++.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCC
Confidence 599999999999999999999 89999999998753
No 202
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=96.62 E-value=0.00087 Score=75.97 Aligned_cols=35 Identities=20% Similarity=0.302 Sum_probs=33.0
Q ss_pred cccEEEECCCchHHHHHHHHHhCC---CeEEEEcCCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAG---YKVLVLEKGSY 305 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G---~kVlVLEkG~~ 305 (781)
++||||||+|++|+.+|.+|++.| ++|+|||+.+.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~ 72 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSN 72 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCC
Confidence 589999999999999999999988 99999999874
No 203
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.61 E-value=0.0076 Score=63.45 Aligned_cols=57 Identities=18% Similarity=0.129 Sum_probs=40.4
Q ss_pred hCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHH
Q 003990 456 NSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLL 518 (781)
Q Consensus 456 ~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LL 518 (781)
+.| ++|+++++|++|..+++ ++.+|.+.+... .++..++.++.||+|+|.-..+.++
T Consensus 196 ~~g-v~i~~~~~v~~i~~~~~----~v~~v~~~~~~~-~g~~~~i~~D~vv~a~G~~p~~~~~ 252 (320)
T 1trb_A 196 NGN-IILHTNRTLEEVTGDQM----GVTGVRLRDTQN-SDNIESLDVAGLFVAIGHSPNTAIF 252 (320)
T ss_dssp TSS-EEEECSCEEEEEEECSS----SEEEEEEECCTT-CCCCEEEECSEEEECSCEEESCGGG
T ss_pred cCC-eEEEcCceeEEEEcCCC----ceEEEEEEeccC-CCceEEEEcCEEEEEeCCCCChHHh
Confidence 345 99999999999987654 688888764111 0234578999999999965444443
No 204
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.60 E-value=0.0017 Score=78.12 Aligned_cols=39 Identities=26% Similarity=0.317 Sum_probs=35.2
Q ss_pred CCcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCCC
Q 003990 269 VIKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCA 307 (781)
Q Consensus 269 ~~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~~ 307 (781)
...+||+|||+|++|+++|+.|++.|++|+|+|+.+...
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~G 314 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVG 314 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCC
Confidence 356899999999999999999999999999999987543
No 205
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.59 E-value=0.0011 Score=74.10 Aligned_cols=35 Identities=26% Similarity=0.366 Sum_probs=32.2
Q ss_pred ccEEEECCCchHHHHHHHHHhC--CCeEEEEcCCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKA--GYKVLVLEKGSYC 306 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~--G~kVlVLEkG~~~ 306 (781)
.||||||+|++|+.+|.+|++. |++|+|||+.+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI 37 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCcc
Confidence 3899999999999999999997 9999999998753
No 206
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=96.57 E-value=0.0013 Score=72.54 Aligned_cols=37 Identities=27% Similarity=0.394 Sum_probs=33.4
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCC--eEEEEcCCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGY--KVLVLEKGSYC 306 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~--kVlVLEkG~~~ 306 (781)
..+||||||+|++|+.+|..|++.|+ +|+|+|+.+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~ 44 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAER 44 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCC
Confidence 46899999999999999999999997 59999998753
No 207
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.54 E-value=0.0012 Score=72.71 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=31.9
Q ss_pred ccEEEECCCchHHHHHHHHHh---CCCeEEEEcCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAK---AGYKVLVLEKGSY 305 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~---~G~kVlVLEkG~~ 305 (781)
.||||||||.+|+.+|..|++ .|++|+|||+.++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~ 38 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRF 38 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCC
Confidence 379999999999999999999 8999999999874
No 208
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=96.53 E-value=0.0076 Score=67.82 Aligned_cols=33 Identities=27% Similarity=0.334 Sum_probs=31.2
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-.++|||+|..|+-+|..|++.|.+|.|+|+++
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 216 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQP 216 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC
Confidence 479999999999999999999999999999986
No 209
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.51 E-value=0.0016 Score=72.59 Aligned_cols=35 Identities=26% Similarity=0.513 Sum_probs=32.6
Q ss_pred cccEEEECCCchHHHHHHHHHh---CCCeEEEEcCCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAK---AGYKVLVLEKGSY 305 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~---~G~kVlVLEkG~~ 305 (781)
..||||||||.+|+.+|..|++ .|++|+|||+.++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~ 41 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDY 41 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCC
Confidence 3699999999999999999999 8999999999875
No 210
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.43 E-value=0.013 Score=61.31 Aligned_cols=57 Identities=9% Similarity=0.008 Sum_probs=40.5
Q ss_pred CeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHHc
Q 003990 459 NSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRS 521 (781)
Q Consensus 459 n~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~S 521 (781)
+++|++++.|++|..+++ ++.+|.+.... +++..++.++.||+|+|..-+..+|..+
T Consensus 193 gv~v~~~~~v~~i~~~~~----~v~~v~~~~~~--~g~~~~i~~D~vi~a~G~~p~~~~l~~~ 249 (311)
T 2q0l_A 193 KIEFLTPYVVEEIKGDAS----GVSSLSIKNTA--TNEKRELVVPGFFIFVGYDVNNAVLKQE 249 (311)
T ss_dssp TEEEETTEEEEEEEEETT----EEEEEEEEETT--TCCEEEEECSEEEECSCEEECCGGGBCT
T ss_pred CeEEEeCCEEEEEECCCC----cEeEEEEEecC--CCceEEEecCEEEEEecCccChhhhhcc
Confidence 399999999999987643 67778776421 2345678999999999965444444433
No 211
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.31 E-value=0.018 Score=60.26 Aligned_cols=54 Identities=24% Similarity=0.276 Sum_probs=39.8
Q ss_pred CeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHH
Q 003990 459 NSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLL 518 (781)
Q Consensus 459 n~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LL 518 (781)
+++|+++++|++|..+++ ++.+|.+.+. ..++...+.++.||+|+|...++.+|
T Consensus 194 gv~v~~~~~v~~i~~~~~----~v~~v~~~~~--~~g~~~~i~~D~vi~a~G~~p~~~~l 247 (310)
T 1fl2_A 194 NVDIILNAQTTEVKGDGS----KVVGLEYRDR--VSGDIHNIELAGIFVQIGLLPNTNWL 247 (310)
T ss_dssp TEEEESSEEEEEEEESSS----SEEEEEEEET--TTCCEEEEECSEEEECSCEEESCGGG
T ss_pred CeEEecCCceEEEEcCCC----cEEEEEEEEC--CCCcEEEEEcCEEEEeeCCccCchHH
Confidence 499999999999986544 7888888752 12355688999999999965333343
No 212
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.23 E-value=0.0023 Score=71.86 Aligned_cols=35 Identities=31% Similarity=0.246 Sum_probs=32.6
Q ss_pred cccEEEECCCchHHHHHHHHHh-C------CCeEEEEcCCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAK-A------GYKVLVLEKGSY 305 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~-~------G~kVlVLEkG~~ 305 (781)
.+||+|||||++|+.+|..|++ . |++|+|+|+.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~ 44 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 44 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCC
Confidence 4799999999999999999999 7 999999999864
No 213
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.16 E-value=0.0031 Score=70.82 Aligned_cols=37 Identities=32% Similarity=0.206 Sum_probs=33.2
Q ss_pred CcccEEEECCCchHHHHHHHHHhCC--CeEEEEcCCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAG--YKVLVLEKGSYC 306 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G--~kVlVLEkG~~~ 306 (781)
..+||||||+|++|+.+|..|++.| ++|+|+|+.+..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 43 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC
Confidence 3579999999999999999999988 999999998753
No 214
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=96.00 E-value=0.014 Score=65.20 Aligned_cols=32 Identities=31% Similarity=0.372 Sum_probs=30.6
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.++|||+|..|+-+|..|++.|.+|.|+|+++
T Consensus 169 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 200 (450)
T 1ges_A 169 RVAVVGAGYIGVELGGVINGLGAKTHLFEMFD 200 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 69999999999999999999999999999975
No 215
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.95 E-value=0.022 Score=63.55 Aligned_cols=33 Identities=33% Similarity=0.371 Sum_probs=31.2
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-.|+|||+|..|+-+|..|++.|.+|.|+|+++
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 203 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAG 203 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Confidence 479999999999999999999999999999976
No 216
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=95.91 E-value=0.033 Score=58.93 Aligned_cols=59 Identities=14% Similarity=0.111 Sum_probs=41.0
Q ss_pred CeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHHcCCC
Q 003990 459 NSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLK 524 (781)
Q Consensus 459 n~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~SGi~ 524 (781)
+++|++++.|++|..+ + ++.+|.+.... +++..++.++.||+|+|.-....+|..+|+.
T Consensus 205 gv~v~~~~~v~~i~~~-~----~~~~v~~~~~~--~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~ 263 (335)
T 2zbw_A 205 RLEVLTPYELRRVEGD-E----RVRWAVVFHNQ--TQEELALEVDAVLILAGYITKLGPLANWGLA 263 (335)
T ss_dssp SSEEETTEEEEEEEES-S----SEEEEEEEETT--TCCEEEEECSEEEECCCEEEECGGGGGSCCC
T ss_pred CeEEecCCcceeEccC-C----CeeEEEEEECC--CCceEEEecCEEEEeecCCCCchHhhhccee
Confidence 3999999999999864 3 56778776421 2344678999999999965443455555543
No 217
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=95.86 E-value=0.0032 Score=73.94 Aligned_cols=36 Identities=22% Similarity=0.301 Sum_probs=33.3
Q ss_pred cccEEEECCCchHHHHHHHHHhCC--------CeEEEEcCCC-CC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAG--------YKVLVLEKGS-YC 306 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G--------~kVlVLEkG~-~~ 306 (781)
..+|+|||+|++|+++|++|+++| ++|+|+|+.+ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 479999999999999999999998 9999999987 55
No 218
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=95.76 E-value=0.038 Score=62.40 Aligned_cols=33 Identities=24% Similarity=0.312 Sum_probs=31.1
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-.|+|||+|..|+-+|..|++.|.+|.|+|+++
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 207 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSG 207 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC
Confidence 369999999999999999999999999999986
No 219
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=95.71 E-value=0.043 Score=57.66 Aligned_cols=60 Identities=20% Similarity=0.180 Sum_probs=43.3
Q ss_pred CCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHHcCCC
Q 003990 457 SGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLK 524 (781)
Q Consensus 457 ~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~SGi~ 524 (781)
.| +++++++.|++|..++ .+.+|.+.+.. .++..++.++.||+|+|....+.+|..+|+.
T Consensus 202 ~g-v~~~~~~~v~~i~~~~-----~~~~v~~~~~~--~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~ 261 (332)
T 3lzw_A 202 SK-VNVLTPFVPAELIGED-----KIEQLVLEEVK--GDRKEILEIDDLIVNYGFVSSLGPIKNWGLD 261 (332)
T ss_dssp SS-CEEETTEEEEEEECSS-----SCCEEEEEETT--SCCEEEEECSEEEECCCEECCCGGGGGSSCC
T ss_pred CC-eEEEeCceeeEEecCC-----ceEEEEEEecC--CCceEEEECCEEEEeeccCCCchHHhhcCcc
Confidence 44 9999999999998654 35567776522 2345678899999999976655666666654
No 220
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=95.69 E-value=0.075 Score=55.94 Aligned_cols=33 Identities=24% Similarity=0.268 Sum_probs=30.5
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-.|+|||+|..|+-+|..|++.|.+|.++++.+
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 185 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRD 185 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCC
Confidence 369999999999999999999999999999875
No 221
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=95.65 E-value=0.0065 Score=67.64 Aligned_cols=33 Identities=27% Similarity=0.444 Sum_probs=29.9
Q ss_pred EEEECCCchHHHHHHHHHhCC--CeEEEEcCCCCC
Q 003990 274 AVVVGSGSGGGLIAGVLAKAG--YKVLVLEKGSYC 306 (781)
Q Consensus 274 VIVVGsG~~G~vaA~~LA~~G--~kVlVLEkG~~~ 306 (781)
|||||||++|+++|.+|++.| .+|+|+|++++.
T Consensus 3 VvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 3 IVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDM 37 (437)
T ss_dssp EEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 899999999999999999987 579999998753
No 222
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=95.65 E-value=0.046 Score=61.16 Aligned_cols=33 Identities=33% Similarity=0.388 Sum_probs=30.9
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-.++|||+|..|+-+|..|++.|.+|.|+|+++
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 207 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAP 207 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCC
Confidence 368999999999999999999999999999976
No 223
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=95.61 E-value=0.18 Score=56.06 Aligned_cols=36 Identities=11% Similarity=0.112 Sum_probs=32.5
Q ss_pred cccEEEECCCchHHHHHHHHHhC--CCeEEEEcCCCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKA--GYKVLVLEKGSYC 306 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~--G~kVlVLEkG~~~ 306 (781)
.-.|+|||+|..|+=+|..|++. |.+|.++++.+.+
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 35799999999999999999998 8999999998743
No 224
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=95.59 E-value=0.051 Score=60.89 Aligned_cols=33 Identities=27% Similarity=0.294 Sum_probs=31.0
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-.++|||+|..|+-+|..|++.|.+|.|+|+++
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 211 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLG 211 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccC
Confidence 369999999999999999999999999999976
No 225
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=95.47 E-value=0.0083 Score=65.67 Aligned_cols=33 Identities=33% Similarity=0.500 Sum_probs=29.6
Q ss_pred cEEEECCCchHHHHHHHHHhCC--CeEEEEcCCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAG--YKVLVLEKGSY 305 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G--~kVlVLEkG~~ 305 (781)
-|||||||.+|+++|.+|++.| .+|+|||+.++
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 3899999999999999998865 68999999875
No 226
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=95.42 E-value=0.14 Score=58.58 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=32.0
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
-.|+|||+|+.|+-+|..|++.+.+|.|+++.+.
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 4699999999999999999999999999999985
No 227
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.35 E-value=0.012 Score=64.46 Aligned_cols=37 Identities=14% Similarity=0.214 Sum_probs=33.3
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYC 306 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~ 306 (781)
.+.-|||||+|++|+.+|..|+..+.+|+|+|+.++.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~ 44 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYL 44 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSC
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCC
Confidence 4567999999999999999997789999999998764
No 228
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=95.35 E-value=0.0085 Score=68.00 Aligned_cols=36 Identities=25% Similarity=0.372 Sum_probs=33.0
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
.+..|||||||.+|+.+|.+|++.+++|+|||+.++
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 345799999999999999999999999999999875
No 229
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=95.31 E-value=0.034 Score=62.56 Aligned_cols=32 Identities=34% Similarity=0.485 Sum_probs=30.6
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.++|||+|..|+-+|..|++.|.+|.|+|+++
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 218 (479)
T 2hqm_A 187 KVVVVGAGYIGIELAGVFHGLGSETHLVIRGE 218 (479)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHHcCCceEEEEeCC
Confidence 69999999999999999999999999999976
No 230
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=95.31 E-value=0.086 Score=55.59 Aligned_cols=33 Identities=27% Similarity=0.367 Sum_probs=30.7
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-.|+|||+|..|+-+|..|++.|.+|.++++.+
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 192 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 192 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCC
Confidence 369999999999999999999999999999875
No 231
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=95.28 E-value=0.069 Score=60.17 Aligned_cols=33 Identities=36% Similarity=0.398 Sum_probs=30.9
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-.|+|||+|..|+-+|..|++.|.+|.|+|+++
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 231 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLD 231 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEeccc
Confidence 369999999999999999999999999999876
No 232
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=95.19 E-value=0.072 Score=59.88 Aligned_cols=31 Identities=35% Similarity=0.498 Sum_probs=29.3
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKG 303 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG 303 (781)
.++|||+|..|+-+|..|++.|.+|.++++.
T Consensus 189 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 219 (483)
T 3dgh_A 189 KTLVVGAGYIGLECAGFLKGLGYEPTVMVRS 219 (483)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 6899999999999999999999999999874
No 233
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=95.02 E-value=0.012 Score=65.26 Aligned_cols=62 Identities=16% Similarity=0.143 Sum_probs=42.5
Q ss_pred hchHHHh-hCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHHcCCC
Q 003990 449 TWLVDLV-NSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLK 524 (781)
Q Consensus 449 ~~L~~a~-~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~SGi~ 524 (781)
.++.... ++| +++++++.|++|..+ + +.+.+ .++...+|.++.||+++|.- .+.++..+|..
T Consensus 204 ~~l~~~l~~~G-V~~~~~~~v~~v~~~------~---~~~~~---~~g~~~~i~~d~vi~~~G~~-~~~~~~~~~~~ 266 (430)
T 3hyw_A 204 RLVEDLFAERN-IDWIANVAVKAIEPD------K---VIYED---LNGNTHEVPAKFTMFMPSFQ-GPEVVASAGDK 266 (430)
T ss_dssp HHHHHHHHHTT-CEEECSCEEEEECSS------E---EEEEC---TTSCEEEEECSEEEEECEEE-CCHHHHTTCTT
T ss_pred HHHHHHHHhCC-eEEEeCceEEEEeCC------c---eEEEe---eCCCceEeecceEEEeccCC-CchHHHhcccc
Confidence 3444443 456 999999999998532 2 33433 23356689999999999954 45778888754
No 234
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=94.99 E-value=0.11 Score=55.14 Aligned_cols=33 Identities=21% Similarity=0.280 Sum_probs=30.5
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-.|+|||+|..|+-+|..|++.|.+|.++++.+
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~ 188 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRD 188 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCC
Confidence 469999999999999999999999999999865
No 235
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=94.92 E-value=0.098 Score=58.87 Aligned_cols=32 Identities=25% Similarity=0.292 Sum_probs=29.7
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.++|||+|..|+-+|..|++.|.+|.++++..
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 218 (488)
T 3dgz_A 187 KTLVVGASYVALECAGFLTGIGLDTTVMMRSI 218 (488)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred eEEEECCCHHHHHHHHHHHHcCCceEEEEcCc
Confidence 59999999999999999999999999999853
No 236
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=94.68 E-value=0.068 Score=60.09 Aligned_cols=33 Identities=30% Similarity=0.442 Sum_probs=31.0
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-.++|||+|..|+-+|..|++.|.+|.++|+++
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~ 224 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGD 224 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCeEEEEECCC
Confidence 479999999999999999999999999999976
No 237
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=94.57 E-value=0.2 Score=56.07 Aligned_cols=33 Identities=33% Similarity=0.348 Sum_probs=30.9
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-.++|||+|..|+-+|..|++.|.+|.++|+++
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 213 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD 213 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Confidence 369999999999999999999999999999976
No 238
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=94.53 E-value=0.13 Score=58.57 Aligned_cols=54 Identities=22% Similarity=0.247 Sum_probs=40.1
Q ss_pred CeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHH
Q 003990 459 NSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLL 518 (781)
Q Consensus 459 n~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LL 518 (781)
|++|++++.|++|..+++ ++++|.+.+. .+++...+.++.||+|+|...+..+|
T Consensus 405 gV~v~~~~~v~~i~~~~~----~v~~v~~~~~--~~g~~~~i~~D~vi~a~G~~pn~~~l 458 (521)
T 1hyu_A 405 NVDIILNAQTTEVKGDGS----KVVGLEYRDR--VSGDIHSVALAGIFVQIGLLPNTHWL 458 (521)
T ss_dssp TEEEECSEEEEEEEECSS----SEEEEEEEET--TTCCEEEEECSEEEECCCEEESCGGG
T ss_pred CcEEEeCCEEEEEEcCCC----cEEEEEEEeC--CCCceEEEEcCEEEECcCCCCCchHH
Confidence 499999999999986544 7888888752 23456688999999999965333333
No 239
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=94.13 E-value=0.2 Score=55.59 Aligned_cols=33 Identities=27% Similarity=0.237 Sum_probs=30.9
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-.++|||+|..|+-+|..|++.|.+|.++|+++
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 180 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLE 180 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccC
Confidence 369999999999999999999999999999976
No 240
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=94.02 E-value=0.34 Score=54.73 Aligned_cols=78 Identities=18% Similarity=0.156 Sum_probs=44.3
Q ss_pred hCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHH---HHHHcCCCCC-----c
Q 003990 456 NSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPN---LLKRSGLKNA-----N 527 (781)
Q Consensus 456 ~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~---LLl~SGi~~p-----~ 527 (781)
++| ++|+++++|++|..+. ....+.. .++.....+|.|+.||.|+|.-.+|. |....++... .
T Consensus 284 ~~G-V~v~~~~~v~~v~~~~-----~~~~~~~---~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~ 354 (502)
T 4g6h_A 284 NTS-IKVHLRTAVAKVEEKQ-----LLAKTKH---EDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLA 354 (502)
T ss_dssp HTT-CEEETTEEEEEECSSE-----EEEEEEC---TTSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEE
T ss_pred hcc-eeeecCceEEEEeCCc-----eEEEEEe---cCcccceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCcee
Confidence 455 9999999999985431 2221111 12222345799999999999765653 3344444221 1
Q ss_pred ccccccc--cccceeec
Q 003990 528 IGKNLHL--HPVTMAWG 542 (781)
Q Consensus 528 VG~nL~d--Hp~~~~~~ 542 (781)
|-.+|+. ||.+++.|
T Consensus 355 Vd~~lq~~~~~~IfAiG 371 (502)
T 4g6h_A 355 VNDFLQVKGSNNIFAIG 371 (502)
T ss_dssp BCTTSBBTTCSSEEECG
T ss_pred ECCccccCCCCCEEEEE
Confidence 4455543 55554444
No 241
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=93.75 E-value=0.15 Score=56.88 Aligned_cols=33 Identities=18% Similarity=0.282 Sum_probs=30.9
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-.++|||+|..|+-+|..|++.|.+|.++|+++
T Consensus 171 ~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~ 203 (463)
T 4dna_A 171 ESILIAGGGYIAVEFANIFHGLGVKTTLIYRGK 203 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC
Confidence 479999999999999999999999999999875
No 242
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.21 E-value=0.098 Score=48.10 Aligned_cols=34 Identities=26% Similarity=0.401 Sum_probs=31.2
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
+=.|+|||.|..|..+|..|.+.|++|+++|+.+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3469999999999999999999999999999864
No 243
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.42 E-value=0.11 Score=47.70 Aligned_cols=32 Identities=34% Similarity=0.507 Sum_probs=29.9
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.|+|+|+|..|..+|..|++.|++|+++|+.+
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 59999999999999999999999999999853
No 244
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.35 E-value=0.11 Score=48.56 Aligned_cols=33 Identities=33% Similarity=0.516 Sum_probs=30.4
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-.|+|||+|..|..+|..|.+.|.+|+++++..
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999854
No 245
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.27 E-value=0.12 Score=46.84 Aligned_cols=32 Identities=19% Similarity=0.377 Sum_probs=29.7
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.|+|||+|..|..+|..|++.|++|+++|+..
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 58999999999999999999999999999843
No 246
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=92.23 E-value=0.11 Score=57.52 Aligned_cols=35 Identities=40% Similarity=0.371 Sum_probs=32.5
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
..+++|||+|..|+-+|..|++.|.+|+|+|+++.
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 183 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDR 183 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcc
Confidence 36899999999999999999999999999999863
No 247
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=91.81 E-value=0.11 Score=56.61 Aligned_cols=36 Identities=19% Similarity=0.182 Sum_probs=32.9
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCAR 308 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~~~ 308 (781)
.|+|||+|..|+-+|..|++.|.+|.|+|+.+...+
T Consensus 148 ~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~ 183 (385)
T 3klj_A 148 KAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLE 183 (385)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCT
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch
Confidence 699999999999999999999999999999986543
No 248
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=91.37 E-value=0.16 Score=47.32 Aligned_cols=31 Identities=19% Similarity=0.068 Sum_probs=29.4
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKG 303 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG 303 (781)
.|+|||+|..|..+|..|.+.|++|+++|+.
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 4899999999999999999999999999985
No 249
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=91.21 E-value=0.18 Score=52.71 Aligned_cols=33 Identities=21% Similarity=0.245 Sum_probs=31.2
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
.|+|||+|..|+=+|..|++.|.+|.|+|+++.
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 689999999999999999999999999999874
No 250
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=91.19 E-value=0.56 Score=55.17 Aligned_cols=32 Identities=34% Similarity=0.560 Sum_probs=29.9
Q ss_pred cEEEEC--CCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVG--SGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVG--sG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.|+||| +|..|+-+|..|++.|.+|.++++.+
T Consensus 525 ~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~ 558 (690)
T 3k30_A 525 KVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGA 558 (690)
T ss_dssp EEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccc
Confidence 499999 99999999999999999999999875
No 251
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=90.28 E-value=0.24 Score=54.97 Aligned_cols=34 Identities=32% Similarity=0.319 Sum_probs=31.6
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
-.++|||+|..|+-+|..|++.|.+|.|+|+++.
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~ 201 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDR 201 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCc
Confidence 3699999999999999999999999999999874
No 252
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=90.27 E-value=0.22 Score=43.50 Aligned_cols=32 Identities=34% Similarity=0.562 Sum_probs=29.6
Q ss_pred cEEEECCCchHHHHHHHHHhCC-CeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAG-YKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G-~kVlVLEkG~ 304 (781)
.|+|+|+|..|..+|..|.+.| ++|.++++..
T Consensus 7 ~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 7 NICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 5899999999999999999999 9999999853
No 253
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.17 E-value=0.2 Score=55.73 Aligned_cols=34 Identities=32% Similarity=0.265 Sum_probs=31.7
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
-.++|||+|..|+-+|..|++.|.+|.|+|+++.
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 205 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARER 205 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 3699999999999999999999999999999874
No 254
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=89.96 E-value=0.25 Score=53.34 Aligned_cols=33 Identities=39% Similarity=0.719 Sum_probs=31.2
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
.++|||+|..|+-+|..|++.|.+|.|+|+++.
T Consensus 145 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 177 (367)
T 1xhc_A 145 EAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAM 177 (367)
T ss_dssp EEEEEECSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred cEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCe
Confidence 689999999999999999999999999999874
No 255
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=89.88 E-value=0.22 Score=45.18 Aligned_cols=32 Identities=31% Similarity=0.463 Sum_probs=29.5
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.|+|+|+|..|..+|..|.+.|++|+++++..
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 48999999999999999999999999999753
No 256
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=89.70 E-value=0.24 Score=52.38 Aligned_cols=32 Identities=31% Similarity=0.503 Sum_probs=29.7
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-|.|||+|..|.-.|..+|.+|++|+|+|..+
T Consensus 8 ~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred eEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 58999999999999999999999999999753
No 257
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=89.45 E-value=0.29 Score=51.69 Aligned_cols=32 Identities=31% Similarity=0.565 Sum_probs=30.0
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.|.|||+|..|+..|..|+++|++|.++.+..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 48999999999999999999999999999864
No 258
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=89.39 E-value=0.31 Score=50.71 Aligned_cols=34 Identities=32% Similarity=0.303 Sum_probs=31.3
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
-.++|||+|..|+-+|..|++.|.+|.|+|+...
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 4699999999999999999999999999998753
No 259
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=89.27 E-value=0.3 Score=51.44 Aligned_cols=32 Identities=25% Similarity=0.395 Sum_probs=29.8
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.|.|||+|..|+..|..|+++|++|.++.+..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 48999999999999999999999999999864
No 260
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.63 E-value=0.28 Score=47.08 Aligned_cols=32 Identities=22% Similarity=0.201 Sum_probs=29.8
Q ss_pred cEEEECCCchHHHHHHHHHhC-CCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKA-GYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~-G~kVlVLEkG~ 304 (781)
.|+|||.|..|..+|..|.+. |++|+++|+.+
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 599999999999999999999 99999999854
No 261
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=88.39 E-value=0.4 Score=52.42 Aligned_cols=35 Identities=26% Similarity=0.302 Sum_probs=32.4
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYC 306 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~ 306 (781)
-.|+|||+|..|+-+|..|++.|.+|.|+|+++..
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 180 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPRL 180 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcc
Confidence 47999999999999999999999999999998754
No 262
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=88.10 E-value=0.39 Score=50.24 Aligned_cols=32 Identities=31% Similarity=0.465 Sum_probs=29.8
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-|.|||+|..|..+|..|+++|++|+++++..
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 49999999999999999999999999999864
No 263
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=87.80 E-value=0.33 Score=48.05 Aligned_cols=31 Identities=16% Similarity=0.404 Sum_probs=29.3
Q ss_pred EEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 274 AVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 274 VIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
|+|||+|..|..+|..|.+.|++|+++|+.+
T Consensus 3 iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 8999999999999999999999999999854
No 264
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=87.68 E-value=0.43 Score=49.44 Aligned_cols=32 Identities=28% Similarity=0.365 Sum_probs=29.7
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-|.|||+|..|..+|..|+++|++|++.++..
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 48999999999999999999999999999864
No 265
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=87.43 E-value=0.32 Score=54.52 Aligned_cols=33 Identities=27% Similarity=0.449 Sum_probs=31.2
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-+|+|||+|..|+-+|..|++.|.+|.|+|+++
T Consensus 187 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 219 (480)
T 3cgb_A 187 EDVTIIGGGAIGLEMAETFVELGKKVRMIERND 219 (480)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEECCGG
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 479999999999999999999999999999976
No 266
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=87.32 E-value=0.5 Score=48.62 Aligned_cols=31 Identities=29% Similarity=0.302 Sum_probs=29.3
Q ss_pred EEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 274 AVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 274 VIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
|.|||+|..|...|..|+++|++|.++++..
T Consensus 3 i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 3 ITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 7899999999999999999999999999865
No 267
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=87.23 E-value=0.44 Score=50.68 Aligned_cols=31 Identities=39% Similarity=0.640 Sum_probs=29.2
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKG 303 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG 303 (781)
-|.|||+|..|+..|..|+++|++|.++++.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 4899999999999999999999999999984
No 268
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=87.06 E-value=0.46 Score=50.58 Aligned_cols=33 Identities=27% Similarity=0.251 Sum_probs=29.2
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
.|+|||+|..|+-+|..|++.|.+|.++|+++.
T Consensus 168 ~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 200 (369)
T 3d1c_A 168 QYVVIGGNESGFDAAYQLAKNGSDIALYTSTTG 200 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECC---
T ss_pred EEEEECCCcCHHHHHHHHHhcCCeEEEEecCCC
Confidence 699999999999999999999999999999863
No 269
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=87.00 E-value=0.53 Score=52.85 Aligned_cols=33 Identities=24% Similarity=0.360 Sum_probs=31.1
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
.|+|||+|..|+-+|..|++.|.+|.|+|+++.
T Consensus 196 ~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 228 (490)
T 2bc0_A 196 RVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDT 228 (490)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred eEEEECCCHHHHHHHHHHHHCCCeEEEEEcccc
Confidence 699999999999999999999999999999864
No 270
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=86.88 E-value=0.5 Score=52.66 Aligned_cols=32 Identities=28% Similarity=0.406 Sum_probs=30.7
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.++|||+|..|+-+|..|++.|.+|.|+|+.+
T Consensus 168 ~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~ 199 (463)
T 2r9z_A 168 RVAIIGAGYIGIELAGLLRSFGSEVTVVALED 199 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 69999999999999999999999999999986
No 271
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=86.73 E-value=0.34 Score=50.48 Aligned_cols=32 Identities=19% Similarity=0.287 Sum_probs=29.8
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.|.|||+|..|+..|..|+++|++|.++.+..
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 48999999999999999999999999999874
No 272
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=86.54 E-value=0.63 Score=45.84 Aligned_cols=33 Identities=21% Similarity=0.282 Sum_probs=30.3
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
..|.|||+|..|...|..|+++|++|.++++..
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 358999999999999999999999999998865
No 273
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=86.35 E-value=0.62 Score=51.79 Aligned_cols=34 Identities=24% Similarity=0.247 Sum_probs=31.6
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
-.++|||+|..|+-+|..|++.|.+|.|+|+++.
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 205 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPR 205 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 3699999999999999999999999999999874
No 274
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=85.93 E-value=0.6 Score=51.43 Aligned_cols=34 Identities=29% Similarity=0.336 Sum_probs=31.6
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
-.|+|||+|..|+-+|..|++.|.+|.|+|+.+.
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~ 183 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAAR 183 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCc
Confidence 3699999999999999999999999999999874
No 275
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=85.85 E-value=0.61 Score=48.59 Aligned_cols=32 Identities=19% Similarity=0.400 Sum_probs=29.5
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.|.|||+|..|...|..|+++|++|.++++..
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 48999999999999999999999999998753
No 276
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=85.79 E-value=0.7 Score=51.10 Aligned_cols=35 Identities=26% Similarity=0.409 Sum_probs=32.5
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCA 307 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~~ 307 (781)
.++|||+|..|+-+|..|++.|.+|.++|+++...
T Consensus 150 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 184 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVL 184 (449)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc
Confidence 79999999999999999999999999999987543
No 277
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=85.67 E-value=0.56 Score=52.45 Aligned_cols=34 Identities=21% Similarity=0.226 Sum_probs=31.6
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
-.++|||+|..|+-+|..|++.|.+|.|+|+.+.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~ 219 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDG 219 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCc
Confidence 3699999999999999999999999999999874
No 278
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=85.58 E-value=0.54 Score=47.81 Aligned_cols=33 Identities=27% Similarity=0.399 Sum_probs=30.1
Q ss_pred ccEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
..|+|||+|..|+.+|..|++.|. +|.|++...
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 569999999999999999999996 899999864
No 279
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=85.55 E-value=0.69 Score=50.53 Aligned_cols=34 Identities=32% Similarity=0.425 Sum_probs=31.7
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
-.|+|||+|..|+-+|..|++.|.+|.|+|+.+.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~ 177 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDE 177 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCc
Confidence 4699999999999999999999999999999874
No 280
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=85.50 E-value=0.96 Score=49.22 Aligned_cols=36 Identities=28% Similarity=0.257 Sum_probs=32.7
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCA 307 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~~ 307 (781)
-.++|||+|..|+-+|..|++.|.+|.++|+.+...
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~ 178 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVM 178 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcch
Confidence 369999999999999999999999999999987643
No 281
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=85.41 E-value=0.65 Score=48.72 Aligned_cols=31 Identities=29% Similarity=0.268 Sum_probs=29.0
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.|.|||+|..|+..|..|+ +|.+|.++.+..
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 4899999999999999999 999999999864
No 282
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=85.16 E-value=0.66 Score=49.02 Aligned_cols=32 Identities=31% Similarity=0.503 Sum_probs=29.8
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-|.|||+|..|...|..|+++|++|.+.++.+
T Consensus 8 kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 48999999999999999999999999999864
No 283
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=85.16 E-value=0.63 Score=51.40 Aligned_cols=33 Identities=18% Similarity=0.238 Sum_probs=31.3
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
.++|||+|..|+-+|..|++.|.+|.|+|+++.
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 181 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYERGLHPTLIHRSDK 181 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEEESSSC
T ss_pred EEEEECCccchhhhHHHHHhcCCcceeeeeecc
Confidence 699999999999999999999999999999874
No 284
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=85.11 E-value=0.66 Score=48.91 Aligned_cols=31 Identities=29% Similarity=0.599 Sum_probs=28.3
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKG 303 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG 303 (781)
-.|.|||+|..|+..|..|+++|++|.++ +-
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 35899999999999999999999999999 53
No 285
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=85.05 E-value=0.66 Score=51.99 Aligned_cols=33 Identities=30% Similarity=0.473 Sum_probs=30.3
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.-|.|||.|..|+..|..|+++|++|+++++..
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 468999999999999999999999999999753
No 286
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=84.90 E-value=0.77 Score=51.65 Aligned_cols=33 Identities=21% Similarity=0.354 Sum_probs=31.2
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
.++|||+|..|+-+|..|++.|.+|.|+|+++.
T Consensus 178 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 210 (500)
T 1onf_A 178 KIGIVGSGYIAVELINVIKRLGIDSYIFARGNR 210 (500)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred eEEEECChHHHHHHHHHHHHcCCeEEEEecCCc
Confidence 699999999999999999999999999999874
No 287
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=84.81 E-value=0.64 Score=51.39 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=30.9
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCe-EEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYK-VLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~k-VlVLEkG~ 304 (781)
-.|+|||+|..|+=+|..|++.|.+ |.|+++++
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 3699999999999999999999999 99999976
No 288
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=84.77 E-value=0.67 Score=51.63 Aligned_cols=33 Identities=24% Similarity=0.151 Sum_probs=30.8
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-.|+|||+|..|+=+|..|++.|.+|.|+++.+
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~ 230 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT 230 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC
Confidence 369999999999999999999999999999875
No 289
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=84.70 E-value=0.95 Score=49.40 Aligned_cols=35 Identities=40% Similarity=0.406 Sum_probs=32.4
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCA 307 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~~ 307 (781)
.++|||+|..|+-+|..|++.|.+|.++|+.+...
T Consensus 154 ~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l 188 (415)
T 3lxd_A 154 NAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVL 188 (415)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchh
Confidence 68999999999999999999999999999988653
No 290
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=84.60 E-value=0.75 Score=48.32 Aligned_cols=32 Identities=22% Similarity=0.398 Sum_probs=29.7
Q ss_pred cEEEECCCchHHHHHHHHHhCCC--eEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGY--KVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~--kVlVLEkG~ 304 (781)
-|.|||+|..|...|..|++.|+ +|.++++..
T Consensus 9 kI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 9 KLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 59999999999999999999998 999999863
No 291
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=84.51 E-value=0.56 Score=52.19 Aligned_cols=34 Identities=32% Similarity=0.351 Sum_probs=31.5
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
-.++|||+|..|+-+|..|++.|.+|.|+|+++.
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 211 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASE 211 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 3699999999999999999999999999999864
No 292
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=84.48 E-value=0.81 Score=50.64 Aligned_cols=33 Identities=21% Similarity=0.380 Sum_probs=31.0
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
.++|||+|..|+-+|..|++.|.+|.|+|+++.
T Consensus 151 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 183 (452)
T 2cdu_A 151 TITIIGSGYIGAELAEAYSNQNYNVNLIDGHER 183 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred eEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 589999999999999999999999999999864
No 293
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=84.29 E-value=0.92 Score=50.42 Aligned_cols=33 Identities=30% Similarity=0.360 Sum_probs=31.2
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
.++|||+|..|+-+|..|++.|.+|.|+|+++.
T Consensus 178 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 210 (467)
T 1zk7_A 178 RLAVIGSSVVALELAQAFARLGSKVTVLARNTL 210 (467)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEEECCc
Confidence 699999999999999999999999999999874
No 294
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=84.13 E-value=0.78 Score=50.92 Aligned_cols=32 Identities=19% Similarity=0.419 Sum_probs=30.1
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-|.|||+|..|..+|..|+++|++|++.|+..
T Consensus 56 kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 56 SVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 59999999999999999999999999999864
No 295
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=83.93 E-value=0.7 Score=52.64 Aligned_cols=34 Identities=24% Similarity=0.252 Sum_probs=32.1
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
-.|+|||+|..|+-+|..|++.|.+|.|+++.+.
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 4799999999999999999999999999999875
No 296
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=83.86 E-value=0.77 Score=45.81 Aligned_cols=31 Identities=19% Similarity=0.228 Sum_probs=28.9
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKG 303 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG 303 (781)
-|+|||+|-.|...|..|.++|.+|+|++..
T Consensus 33 ~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 33 SVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 5899999999999999999999999999863
No 297
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=83.78 E-value=0.85 Score=48.36 Aligned_cols=34 Identities=26% Similarity=0.467 Sum_probs=30.6
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKG 303 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG 303 (781)
.+.-+.|||+|..|+..|..|+++|++|.++++.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3456999999999999999999999999999885
No 298
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=83.44 E-value=0.81 Score=51.02 Aligned_cols=32 Identities=31% Similarity=0.399 Sum_probs=29.8
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-|.|||+|..|..+|..|+++|++|+++|+..
T Consensus 39 kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 48999999999999999999999999999854
No 299
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=83.22 E-value=0.92 Score=48.19 Aligned_cols=32 Identities=22% Similarity=0.317 Sum_probs=29.7
Q ss_pred cEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
-|.|||+|..|..+|..|+..|+ +|.++|...
T Consensus 11 kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 11 KVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 59999999999999999999998 999999854
No 300
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=83.11 E-value=1 Score=51.39 Aligned_cols=33 Identities=33% Similarity=0.328 Sum_probs=31.2
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
.|+|||+|..|+-+|..|++.|.+|.++|+.+.
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 185 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELADQ 185 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCc
Confidence 699999999999999999999999999999874
No 301
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=83.09 E-value=0.93 Score=47.26 Aligned_cols=33 Identities=24% Similarity=0.305 Sum_probs=29.8
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.--|.|||+|..|...|..|+ +|++|++.++.+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 346899999999999999999 999999999864
No 302
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=83.09 E-value=0.93 Score=48.26 Aligned_cols=32 Identities=34% Similarity=0.480 Sum_probs=29.6
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.|.|||+|..|...|..|+++|++|.++++.+
T Consensus 6 ki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 6 TYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 58999999999999999999999999998753
No 303
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=83.08 E-value=0.76 Score=48.44 Aligned_cols=29 Identities=21% Similarity=0.393 Sum_probs=28.0
Q ss_pred EEEECCCchHHHHHHHHHhCCCeEEEEcC
Q 003990 274 AVVVGSGSGGGLIAGVLAKAGYKVLVLEK 302 (781)
Q Consensus 274 VIVVGsG~~G~vaA~~LA~~G~kVlVLEk 302 (781)
|.|||+|..|...|..|+++|++|.++++
T Consensus 3 I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 3 VSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 78999999999999999999999999988
No 304
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=82.62 E-value=0.97 Score=49.92 Aligned_cols=31 Identities=29% Similarity=0.454 Sum_probs=29.0
Q ss_pred EEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 274 AVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 274 VIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
|.|||.|..|+..|..|+++|++|+++++..
T Consensus 3 I~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 3 ISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 7899999999999999999999999998753
No 305
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=82.60 E-value=1.2 Score=49.63 Aligned_cols=34 Identities=26% Similarity=0.340 Sum_probs=31.6
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
-.++|||+|..|+-+|..|++.|.+|.++|+++.
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 206 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDR 206 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 3699999999999999999999999999999874
No 306
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=82.59 E-value=0.8 Score=52.23 Aligned_cols=34 Identities=21% Similarity=0.355 Sum_probs=32.0
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
-.|+|||+|..|+-+|..|++.|.+|.|+++.+.
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 4699999999999999999999999999999985
No 307
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=82.33 E-value=1 Score=50.06 Aligned_cols=32 Identities=31% Similarity=0.385 Sum_probs=29.9
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.|.|||.|..|+..|..|+++|++|+++++..
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 48999999999999999999999999999864
No 308
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=82.31 E-value=0.65 Score=47.88 Aligned_cols=31 Identities=19% Similarity=0.261 Sum_probs=29.1
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKG 303 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG 303 (781)
-|+|||+|-.|...|..|.+.|.+|+|++..
T Consensus 15 ~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 15 RILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp EEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred EEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 5999999999999999999999999999864
No 309
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=82.07 E-value=1.1 Score=46.63 Aligned_cols=35 Identities=29% Similarity=0.305 Sum_probs=32.3
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYC 306 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~ 306 (781)
-.++|||+|..|+-+|..|++.|.+|.++++++..
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~ 208 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHL 208 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 46999999999999999999999999999998754
No 310
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=81.87 E-value=1 Score=48.36 Aligned_cols=32 Identities=38% Similarity=0.450 Sum_probs=29.9
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.|.|||+|..|...|..|+++|++|.+.++.+
T Consensus 31 kI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 31 PIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred eEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 59999999999999999999999999999853
No 311
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=81.87 E-value=1 Score=46.84 Aligned_cols=35 Identities=20% Similarity=0.254 Sum_probs=31.8
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYC 306 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~ 306 (781)
-.|+|||+|..|+-+|..|++.|.+|.++++.+..
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~ 190 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKY 190 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCcc
Confidence 36999999999999999999999999999998753
No 312
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=81.77 E-value=0.99 Score=51.97 Aligned_cols=31 Identities=29% Similarity=0.340 Sum_probs=29.7
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKG 303 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG 303 (781)
.|+|||+|..|+-+|..|++.|.+|.|+|++
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 5999999999999999999999999999987
No 313
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=81.74 E-value=1.1 Score=49.82 Aligned_cols=33 Identities=27% Similarity=0.390 Sum_probs=31.0
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
.++|||+|..|+-+|..|++.|.+|.++++++.
T Consensus 189 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 221 (478)
T 3dk9_A 189 RSVIVGAGYIAVEMAGILSALGSKTSLMIRHDK 221 (478)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCc
Confidence 689999999999999999999999999999863
No 314
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=81.27 E-value=1.1 Score=49.20 Aligned_cols=32 Identities=25% Similarity=0.496 Sum_probs=30.2
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.|||||.|-.|..+|..|.+.|++|+|||+.+
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred eEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 49999999999999999999999999999864
No 315
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=81.20 E-value=1.3 Score=49.58 Aligned_cols=33 Identities=33% Similarity=0.332 Sum_probs=30.8
Q ss_pred cEEEECCCchHHHHHHHHHhC-CC-eEEEEcCCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKA-GY-KVLVLEKGSY 305 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~-G~-kVlVLEkG~~ 305 (781)
.|.|||.|..|+.+|..|+++ |+ +|+++++...
T Consensus 20 kIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 20 KIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp EEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred EEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 589999999999999999999 99 9999998763
No 316
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=81.04 E-value=1.2 Score=47.34 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=31.6
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYC 306 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~ 306 (781)
.|+|||+|..|+-+|..|++.|.+|.++++++..
T Consensus 165 ~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 198 (360)
T 3ab1_A 165 RVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEF 198 (360)
T ss_dssp EEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSC
T ss_pred cEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCC
Confidence 6999999999999999999999999999998754
No 317
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=80.90 E-value=0.69 Score=51.57 Aligned_cols=31 Identities=23% Similarity=0.518 Sum_probs=29.7
Q ss_pred EEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 274 AVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 274 VIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
|||+|+|-.|..+|..|++.|++|+|||+.+
T Consensus 6 iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 6 IIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 9999999999999999999999999999864
No 318
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=80.89 E-value=1.2 Score=43.38 Aligned_cols=31 Identities=26% Similarity=0.343 Sum_probs=28.7
Q ss_pred EEEEC-CCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 274 AVVVG-SGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 274 VIVVG-sG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
+.||| +|..|..+|..|++.|++|.++++..
T Consensus 3 i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 3 VALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 78999 99999999999999999999998753
No 319
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=80.77 E-value=1.3 Score=45.37 Aligned_cols=31 Identities=13% Similarity=0.204 Sum_probs=29.0
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKG 303 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG 303 (781)
-++|+|+|..|..+|..|++.|.+|.|+.|.
T Consensus 121 ~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 121 RILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 5999999999999999999999999999875
No 320
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=80.59 E-value=1.3 Score=44.56 Aligned_cols=33 Identities=30% Similarity=0.487 Sum_probs=30.2
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.-+.|||.|..|...|..|+++|++|++.++..
T Consensus 20 ~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 20 MKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 458999999999999999999999999998864
No 321
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=80.46 E-value=1.2 Score=49.82 Aligned_cols=32 Identities=38% Similarity=0.516 Sum_probs=29.7
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-|.|||+|..|..+|..|+++|++|++.|+..
T Consensus 7 kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 48999999999999999999999999999864
No 322
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=80.24 E-value=1.4 Score=43.51 Aligned_cols=32 Identities=28% Similarity=0.411 Sum_probs=29.5
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-+.|||+|..|...|..|++.|++|.++++..
T Consensus 30 ~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 30 KVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 59999999999999999999999999998753
No 323
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=80.16 E-value=0.89 Score=48.81 Aligned_cols=32 Identities=41% Similarity=0.418 Sum_probs=29.7
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.|.|||+|..|...|..|+++|++|.++++..
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 59999999999999999999999999998753
No 324
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=80.14 E-value=1.5 Score=50.22 Aligned_cols=34 Identities=26% Similarity=0.339 Sum_probs=31.7
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYC 306 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~ 306 (781)
.++|||+|..|+-+|..|++.|.+|.++|+++..
T Consensus 189 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 222 (588)
T 3ics_A 189 HATVIGGGFIGVEMVENLRERGIEVTLVEMANQV 222 (588)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcc
Confidence 6899999999999999999999999999998753
No 325
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=80.09 E-value=1.5 Score=46.59 Aligned_cols=34 Identities=21% Similarity=0.479 Sum_probs=30.3
Q ss_pred cccEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
..-|+|||+|..|+.+|..|+..|. ++.|+|...
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 4579999999999999999999995 788898765
No 326
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=80.03 E-value=1.4 Score=46.02 Aligned_cols=31 Identities=26% Similarity=0.373 Sum_probs=28.8
Q ss_pred EEEECCCchHHHHHHHHHhCCC--eEEEEcCCC
Q 003990 274 AVVVGSGSGGGLIAGVLAKAGY--KVLVLEKGS 304 (781)
Q Consensus 274 VIVVGsG~~G~vaA~~LA~~G~--kVlVLEkG~ 304 (781)
|.|||+|..|..+|..|+..|+ .|.++|...
T Consensus 3 I~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 3 VGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 7899999999999999999998 999999853
No 327
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=79.96 E-value=1.5 Score=46.21 Aligned_cols=32 Identities=31% Similarity=0.516 Sum_probs=29.7
Q ss_pred cEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
-|.|||+|..|..+|..|+++|+ +|.++|+..
T Consensus 6 kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 6 KIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 58999999999999999999998 999999864
No 328
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=79.85 E-value=1.7 Score=49.21 Aligned_cols=62 Identities=16% Similarity=0.219 Sum_probs=44.4
Q ss_pred hCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHH-HHHHcCCCC
Q 003990 456 NSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPN-LLKRSGLKN 525 (781)
Q Consensus 456 ~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~-LLl~SGi~~ 525 (781)
+.| ++|+++++|++|..+++ .++.++.+.. .+++ .++.|+.||+|+|..-+.. +|..+|+..
T Consensus 267 ~~G-V~i~~~~~V~~i~~~~~---~~v~~~~v~~---~~G~-~~i~aD~Vv~A~G~~p~~~~~l~~~gl~~ 329 (523)
T 1mo9_A 267 EQG-MEIISGSNVTRIEEDAN---GRVQAVVAMT---PNGE-MRIETDFVFLGLGEQPRSAELAKILGLDL 329 (523)
T ss_dssp HTT-CEEESSCEEEEEEECTT---SBEEEEEEEE---TTEE-EEEECSCEEECCCCEECCHHHHHHHTCCB
T ss_pred hCC-cEEEECCEEEEEEEcCC---CceEEEEEEE---CCCc-EEEEcCEEEECcCCccCCccCHHHcCCcc
Confidence 355 99999999999986533 1565555553 1222 3789999999999876666 788888853
No 329
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=79.48 E-value=1.7 Score=44.18 Aligned_cols=34 Identities=24% Similarity=0.367 Sum_probs=30.0
Q ss_pred cccEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
..-|+|||+|..|+.+|..|+..|. ++.|+|...
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 3579999999999999999999996 788888764
No 330
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=79.37 E-value=1.5 Score=45.59 Aligned_cols=32 Identities=25% Similarity=0.180 Sum_probs=29.8
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.|.|||.|..|...|..|+++|++|.+.++..
T Consensus 9 ~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 9 HVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 58999999999999999999999999998754
No 331
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=79.35 E-value=1.5 Score=45.20 Aligned_cols=36 Identities=19% Similarity=0.204 Sum_probs=32.7
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYCA 307 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~~ 307 (781)
-.|+|||+|..|+-+|..|++.|.+|.++++++...
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~ 190 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK 190 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCC
Confidence 479999999999999999999999999999987543
No 332
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=79.31 E-value=1.4 Score=49.56 Aligned_cols=33 Identities=24% Similarity=0.277 Sum_probs=31.0
Q ss_pred cEEEECCCchHHHHHHHHHhC---CCeEEEEcCCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKA---GYKVLVLEKGSY 305 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~---G~kVlVLEkG~~ 305 (781)
.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 193 ~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~ 228 (495)
T 2wpf_A 193 RVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNL 228 (495)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCc
Confidence 699999999999999999999 999999999874
No 333
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=79.28 E-value=0.72 Score=42.24 Aligned_cols=32 Identities=28% Similarity=0.344 Sum_probs=29.1
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-|+|||+|..|..+|..|++.|.+|.+.++..
T Consensus 23 ~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 23 KILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp EEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 58999999999999999999999999998853
No 334
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=79.25 E-value=1.6 Score=45.06 Aligned_cols=32 Identities=28% Similarity=0.377 Sum_probs=29.6
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-|.|||.|..|...|..|+++|++|.+.++..
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 37899999999999999999999999998864
No 335
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=79.25 E-value=1.6 Score=46.32 Aligned_cols=32 Identities=22% Similarity=0.354 Sum_probs=29.8
Q ss_pred cEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
-|.|||+|..|..+|..|+..|+ +|.++|...
T Consensus 16 kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 16 KISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 69999999999999999999998 999999854
No 336
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=79.17 E-value=1.6 Score=48.20 Aligned_cols=34 Identities=18% Similarity=0.369 Sum_probs=31.5
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
...+.|||.|..|+..|..|+++|++|+++++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~ 41 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDA 41 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4578999999999999999999999999999875
No 337
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=78.94 E-value=1.5 Score=49.93 Aligned_cols=32 Identities=28% Similarity=0.353 Sum_probs=29.9
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.++|||+|..|+=.|..+++.|.+|+|+++..
T Consensus 225 ~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~ 256 (542)
T 4b1b_A 225 KTLVVGASYVALECSGFLNSLGYDVTVAVRSI 256 (542)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEEESSC
T ss_pred eEEEECCCHHHHHHHHHHHhcCCeEEEecccc
Confidence 58999999999999999999999999999854
No 338
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=78.93 E-value=1.8 Score=48.90 Aligned_cols=31 Identities=32% Similarity=0.378 Sum_probs=29.4
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKG 303 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG 303 (781)
.++|||+|..|+-+|..|++.|.+|.|+++.
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred eEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 4999999999999999999999999999985
No 339
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=78.79 E-value=1.1 Score=46.65 Aligned_cols=30 Identities=30% Similarity=0.471 Sum_probs=28.6
Q ss_pred cEEEECCCchHHHHHHHHHhC-----C-CeEEEEcC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKA-----G-YKVLVLEK 302 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~-----G-~kVlVLEk 302 (781)
.|.|||+|..|+..|..|+++ | ++|.++++
T Consensus 10 ~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 599999999999999999999 9 99999987
No 340
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=78.77 E-value=1.4 Score=49.30 Aligned_cols=34 Identities=26% Similarity=0.276 Sum_probs=31.4
Q ss_pred ccEEEECCCchHHHHHHHHHhC---CCeEEEEcCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKA---GYKVLVLEKGSY 305 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~---G~kVlVLEkG~~ 305 (781)
-.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~ 224 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDM 224 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCC
Confidence 3799999999999999999998 999999999874
No 341
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=78.68 E-value=1.9 Score=45.03 Aligned_cols=33 Identities=27% Similarity=0.348 Sum_probs=30.4
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-.|.|||.|..|...|..|+++|++|.+.++..
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 369999999999999999999999999998864
No 342
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=78.65 E-value=1.6 Score=45.35 Aligned_cols=32 Identities=38% Similarity=0.690 Sum_probs=29.5
Q ss_pred cEEEEC-CCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVG-SGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVG-sG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-|.||| .|..|...|..|++.|++|.++++..
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 489999 99999999999999999999998754
No 343
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=78.45 E-value=1.2 Score=48.45 Aligned_cols=29 Identities=34% Similarity=0.591 Sum_probs=27.2
Q ss_pred cEEEECCCchHHHHHHHHHh-CCCeEEEEc
Q 003990 273 DAVVVGSGSGGGLIAGVLAK-AGYKVLVLE 301 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~-~G~kVlVLE 301 (781)
.|.|||+|..|+..|..|++ +|++|.+++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 48999999999999999998 599999998
No 344
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=78.44 E-value=1.7 Score=45.06 Aligned_cols=32 Identities=31% Similarity=0.414 Sum_probs=29.6
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-|.|||.|..|...|..|+++|++|.+.++..
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 48999999999999999999999999998854
No 345
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=78.20 E-value=1.8 Score=45.58 Aligned_cols=32 Identities=31% Similarity=0.467 Sum_probs=29.9
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.|.|||.|..|...|..|+++|++|.+.++..
T Consensus 33 ~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 33 KITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp EEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 69999999999999999999999999998754
No 346
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=78.12 E-value=1.4 Score=47.59 Aligned_cols=35 Identities=40% Similarity=0.390 Sum_probs=31.5
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
.+.-|||+|+|.+|..+|..|...|. +|.++|+-.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 45679999999999999999999998 999999864
No 347
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=78.04 E-value=1.5 Score=48.34 Aligned_cols=34 Identities=24% Similarity=0.189 Sum_probs=31.0
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
...+.|||.|..|+.+|..||+.|++|+.+|-..
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 4579999999999999999999999999998753
No 348
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=77.93 E-value=1.6 Score=45.28 Aligned_cols=33 Identities=18% Similarity=0.095 Sum_probs=30.6
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-.|.|||.|..|...|..|+++|++|.+.++.+
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 469999999999999999999999999999865
No 349
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=77.89 E-value=1.5 Score=48.18 Aligned_cols=33 Identities=30% Similarity=0.287 Sum_probs=30.2
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
...-|||.|..|+..|..|+++|++|+++++..
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 356799999999999999999999999999864
No 350
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=77.74 E-value=1.9 Score=48.27 Aligned_cols=34 Identities=26% Similarity=0.345 Sum_probs=31.5
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
-.++|||+|..|+-+|..|++.|.+|.|+|+++.
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 216 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDH 216 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 3689999999999999999999999999999874
No 351
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=77.68 E-value=2 Score=46.76 Aligned_cols=33 Identities=18% Similarity=0.219 Sum_probs=30.5
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.-|+|||+|..|..+|..|...|.+|+++|+.+
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 469999999999999999999999999999865
No 352
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=77.60 E-value=1.6 Score=44.43 Aligned_cols=32 Identities=16% Similarity=0.071 Sum_probs=29.7
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-.|+|||+|..|+-+|..|++.| +|.+++++.
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~ 173 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGI 173 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTT
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCC
Confidence 47999999999999999999999 999999875
No 353
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=77.52 E-value=1.9 Score=47.80 Aligned_cols=32 Identities=31% Similarity=0.355 Sum_probs=30.2
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-|.|||.|.+|..+|..|.+.|++|.+.|+..
T Consensus 11 ~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 11 KVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp EEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 58999999999999999999999999999875
No 354
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=77.48 E-value=2.5 Score=44.07 Aligned_cols=33 Identities=33% Similarity=0.564 Sum_probs=30.3
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-.|.|||.|..|...|..|+++|++|++.++..
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999998754
No 355
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=77.44 E-value=1.9 Score=44.03 Aligned_cols=31 Identities=29% Similarity=0.368 Sum_probs=28.7
Q ss_pred EEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 274 AVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 274 VIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
|.|||+|..|...|..|++.|++|.++++..
T Consensus 3 i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 3 IGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 7899999999999999999999999998753
No 356
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=77.37 E-value=2 Score=44.06 Aligned_cols=33 Identities=33% Similarity=0.537 Sum_probs=30.1
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
--++|||+|.+|..+|+.|++.|.+|.|+.|..
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 358999999999999999999999999998864
No 357
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=77.19 E-value=1.9 Score=48.02 Aligned_cols=33 Identities=39% Similarity=0.405 Sum_probs=29.8
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
--|+|+|+|..|..+|..|+..|.+|++.|+.+
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 358999999999999999999999999998753
No 358
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=77.08 E-value=1.8 Score=48.04 Aligned_cols=35 Identities=34% Similarity=0.339 Sum_probs=32.2
Q ss_pred ccEEEECCCchHHHHHHHHHhC-CCeEEEEcCCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKA-GYKVLVLEKGSYC 306 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~-G~kVlVLEkG~~~ 306 (781)
-.++|||+|..|+-+|..|++. |.+|.++|+++..
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~ 195 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQI 195 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcc
Confidence 4799999999999999999999 9999999998754
No 359
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=76.99 E-value=1.6 Score=45.04 Aligned_cols=32 Identities=31% Similarity=0.489 Sum_probs=29.5
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.|.|||.|..|...|..|+++|++|.+.++.+
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 37899999999999999999999999998864
No 360
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=76.93 E-value=1.6 Score=47.09 Aligned_cols=35 Identities=26% Similarity=0.378 Sum_probs=31.3
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
.+.-|||+|+|.+|..+|..|...|. +|.|+++-+
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~G 226 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKG 226 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 35679999999999999999999997 899999864
No 361
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=76.68 E-value=1.6 Score=47.55 Aligned_cols=30 Identities=23% Similarity=0.227 Sum_probs=27.9
Q ss_pred EEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 274 AVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 274 VIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
|.|||.|..|+..|..|++ |++|+++++..
T Consensus 3 I~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 3 IAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 7899999999999999999 99999998853
No 362
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=76.61 E-value=1.7 Score=45.19 Aligned_cols=35 Identities=26% Similarity=0.489 Sum_probs=30.8
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
...-|+|||+|..|+.+|..|+.+|. ++.|+|...
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 45689999999999999999999995 799998754
No 363
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=76.43 E-value=2.1 Score=43.96 Aligned_cols=35 Identities=20% Similarity=0.176 Sum_probs=32.1
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYC 306 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~ 306 (781)
-.++|||+|..|+-+|..|++.|.+|.++++.+..
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 46999999999999999999999999999998754
No 364
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=76.20 E-value=1.8 Score=51.12 Aligned_cols=32 Identities=28% Similarity=0.429 Sum_probs=30.0
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-|.|||+|..|..+|..|+++|++|++.|+..
T Consensus 314 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 49999999999999999999999999999864
No 365
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=76.12 E-value=1.8 Score=45.65 Aligned_cols=31 Identities=23% Similarity=0.374 Sum_probs=28.7
Q ss_pred EEEECCCchHHHHHHHHHhCCC--eEEEEcCCC
Q 003990 274 AVVVGSGSGGGLIAGVLAKAGY--KVLVLEKGS 304 (781)
Q Consensus 274 VIVVGsG~~G~vaA~~LA~~G~--kVlVLEkG~ 304 (781)
|.|||+|..|..+|..|++.|+ +|.++++..
T Consensus 3 I~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 3 IGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 7899999999999999999998 999999853
No 366
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=75.99 E-value=1.9 Score=43.71 Aligned_cols=31 Identities=29% Similarity=0.656 Sum_probs=28.6
Q ss_pred EEEECCCchHHHHHHHHHhCC-CeEEEEcCCC
Q 003990 274 AVVVGSGSGGGLIAGVLAKAG-YKVLVLEKGS 304 (781)
Q Consensus 274 VIVVGsG~~G~vaA~~LA~~G-~kVlVLEkG~ 304 (781)
|.|||+|..|...|..|+++| ++|.+.++..
T Consensus 3 i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 3 VYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 789999999999999999999 9999998753
No 367
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=75.69 E-value=1.5 Score=47.24 Aligned_cols=32 Identities=19% Similarity=0.291 Sum_probs=29.7
Q ss_pred cEEEECCCchHHHHHHHHHhCC-------CeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAG-------YKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G-------~kVlVLEkG~ 304 (781)
-|.|||+|..|+..|..|+++| ++|.++++..
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~ 61 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDE 61 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSC
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECCh
Confidence 4899999999999999999999 9999999865
No 368
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=75.65 E-value=2.3 Score=44.90 Aligned_cols=32 Identities=28% Similarity=0.519 Sum_probs=29.3
Q ss_pred cEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
-|.|||+|..|..+|..|+..|+ +|.++|...
T Consensus 6 kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 6 KIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 58999999999999999999998 999999753
No 369
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=75.64 E-value=2.1 Score=46.01 Aligned_cols=33 Identities=24% Similarity=0.399 Sum_probs=29.9
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
--|+|+|+|..|..+|..|...|.+|+++++..
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 358999999999999999999999999998753
No 370
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=75.58 E-value=2.3 Score=43.44 Aligned_cols=32 Identities=25% Similarity=0.342 Sum_probs=29.7
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-|+|.|+|..|..++..|.++|++|+++.+..
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 38999999999999999999999999998864
No 371
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=75.58 E-value=1.7 Score=44.70 Aligned_cols=32 Identities=13% Similarity=0.226 Sum_probs=29.5
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-++|+|+|.+|..+|..|++.|.+|.|..|..
T Consensus 121 ~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 121 HVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp EEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred EEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 59999999999999999999999999998853
No 372
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=75.50 E-value=2.4 Score=43.85 Aligned_cols=32 Identities=28% Similarity=0.457 Sum_probs=29.5
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.|.|||.|..|...|..|++.|++|.++++..
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 58999999999999999999999999998753
No 373
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=75.38 E-value=2.5 Score=43.60 Aligned_cols=31 Identities=26% Similarity=0.412 Sum_probs=28.8
Q ss_pred EEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 274 AVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 274 VIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
|.|||.|..|...|..|++.|++|.+.++..
T Consensus 3 i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 3 VGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp EEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred EEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 7899999999999999999999999998754
No 374
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=75.35 E-value=2.5 Score=44.26 Aligned_cols=31 Identities=26% Similarity=0.350 Sum_probs=28.5
Q ss_pred EEEECCCchHHHHHHHHHhC--CCeEEEEcCCC
Q 003990 274 AVVVGSGSGGGLIAGVLAKA--GYKVLVLEKGS 304 (781)
Q Consensus 274 VIVVGsG~~G~vaA~~LA~~--G~kVlVLEkG~ 304 (781)
|.|||+|..|..+|..|++. |.+|.++|+..
T Consensus 3 I~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 3 ITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 78999999999999999985 79999999864
No 375
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=75.33 E-value=3.6 Score=42.52 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=29.5
Q ss_pred ccEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
-.++|||+|.+|..+|+.|++.|. +|.|+.|-.
T Consensus 123 k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 469999999999999999999997 899998753
No 376
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=75.25 E-value=2.6 Score=40.91 Aligned_cols=31 Identities=19% Similarity=0.357 Sum_probs=28.5
Q ss_pred EEEECC-CchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 274 AVVVGS-GSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 274 VIVVGs-G~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
|+|+|+ |..|..++.+|+++|++|.++.|..
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred EEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 799995 9999999999999999999998864
No 377
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=75.14 E-value=2.4 Score=44.58 Aligned_cols=32 Identities=28% Similarity=0.544 Sum_probs=29.6
Q ss_pred cEEEECCCchHHHHHHHHHhCCC--eEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGY--KVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~--kVlVLEkG~ 304 (781)
-|.|||.|..|...|..|+++|+ +|++.++..
T Consensus 35 kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 35 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 58999999999999999999999 999998854
No 378
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=75.10 E-value=2.4 Score=44.57 Aligned_cols=31 Identities=26% Similarity=0.385 Sum_probs=29.3
Q ss_pred cEEEECCCchHHHHHHHHHhCCC-eEEEEcCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKG 303 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG 303 (781)
-|.|||+|..|..+|..|+..|+ .|.++|..
T Consensus 10 kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 10 KVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 59999999999999999999999 99999985
No 379
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=75.08 E-value=1.9 Score=45.06 Aligned_cols=32 Identities=19% Similarity=0.329 Sum_probs=29.0
Q ss_pred cEEEECCCchHHHHHHHHHhCC--CeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAG--YKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G--~kVlVLEkG~ 304 (781)
-|.|||+|..|..+|..|+++| .+|.++++..
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 3889999999999999999999 7999999853
No 380
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=75.02 E-value=1.4 Score=43.62 Aligned_cols=32 Identities=19% Similarity=0.401 Sum_probs=29.0
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEE-EcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLV-LEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlV-LEkG~ 304 (781)
-|.|||+|..|...|..|+++|++|++ .++..
T Consensus 25 kI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 25 TYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 589999999999999999999999998 77653
No 381
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=75.01 E-value=3 Score=43.57 Aligned_cols=33 Identities=27% Similarity=0.245 Sum_probs=30.1
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-.|.|||.|..|...|..|++.|++|.++++..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 359999999999999999999999999998754
No 382
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=75.00 E-value=2.3 Score=43.73 Aligned_cols=32 Identities=16% Similarity=0.326 Sum_probs=29.5
Q ss_pred cEEEECC-CchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGS-GSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGs-G~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-|.|||+ |..|...|..|+++|++|.++++..
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 5999999 9999999999999999999998753
No 383
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=74.91 E-value=2.1 Score=47.00 Aligned_cols=31 Identities=19% Similarity=0.222 Sum_probs=28.9
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.|.|||.|..|+..|..|++ |++|+++++..
T Consensus 38 kIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 38 KITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp EEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 59999999999999999998 99999999864
No 384
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=74.91 E-value=1.1 Score=44.83 Aligned_cols=30 Identities=27% Similarity=0.226 Sum_probs=28.2
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEK 302 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEk 302 (781)
.|.|||.|..|...|..|+++|++|.++++
T Consensus 8 kI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 8 RVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp EEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred EEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 589999999999999999999999999876
No 385
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=74.90 E-value=2.2 Score=44.91 Aligned_cols=32 Identities=19% Similarity=0.230 Sum_probs=29.8
Q ss_pred cEEEECCCchHHHHHHHHHhCC-CeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAG-YKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G-~kVlVLEkG~ 304 (781)
.|.|||.|..|...|..|+++| ++|++.++..
T Consensus 26 ~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 26 TIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred eEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4899999999999999999999 9999999864
No 386
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=74.87 E-value=2.4 Score=44.19 Aligned_cols=32 Identities=19% Similarity=0.259 Sum_probs=29.2
Q ss_pred cEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
.++|||+|.+|..+|..|++.|. +|.|..|..
T Consensus 143 ~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 143 RILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred EEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 59999999999999999999997 999998753
No 387
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=74.81 E-value=2.2 Score=44.69 Aligned_cols=32 Identities=13% Similarity=0.323 Sum_probs=29.2
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-.|+|||+|..|+-+|..|++.| +|.++++..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 47999999999999999999998 699999874
No 388
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=74.81 E-value=1.3 Score=44.23 Aligned_cols=32 Identities=13% Similarity=0.042 Sum_probs=29.3
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-.++|||+|-.|..+|..|.+.|+ |+++|+.+
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 459999999999999999999999 99999864
No 389
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=74.80 E-value=2.5 Score=43.30 Aligned_cols=31 Identities=29% Similarity=0.538 Sum_probs=28.5
Q ss_pred EEEECCCchHHHHHHHHHhCCC--eEEEEcCCC
Q 003990 274 AVVVGSGSGGGLIAGVLAKAGY--KVLVLEKGS 304 (781)
Q Consensus 274 VIVVGsG~~G~vaA~~LA~~G~--kVlVLEkG~ 304 (781)
|.|||.|..|...|..|++.|+ +|++.++..
T Consensus 4 I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 4 VLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 7899999999999999999998 999998753
No 390
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=74.74 E-value=1.5 Score=46.67 Aligned_cols=32 Identities=25% Similarity=0.333 Sum_probs=29.8
Q ss_pred cEEEECCCchHHHHHHHHHhCC-------CeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAG-------YKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G-------~kVlVLEkG~ 304 (781)
-|.|||+|..|...|..|+++| ++|.++++..
T Consensus 10 kI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~ 48 (354)
T 1x0v_A 10 KVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEE 48 (354)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCC
T ss_pred eEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcCh
Confidence 5999999999999999999999 8999999865
No 391
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=74.72 E-value=2 Score=46.35 Aligned_cols=33 Identities=21% Similarity=0.249 Sum_probs=30.3
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.-|+|||+|..|..+|..|...|.+|+++++..
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999864
No 392
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=74.56 E-value=2.4 Score=45.50 Aligned_cols=33 Identities=21% Similarity=0.309 Sum_probs=30.0
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
--|+|+|+|.+|..+|..|...|.+|+++++..
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999999999999998853
No 393
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=74.33 E-value=2.6 Score=41.08 Aligned_cols=31 Identities=26% Similarity=0.475 Sum_probs=28.7
Q ss_pred EEEECC-CchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 274 AVVVGS-GSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 274 VIVVGs-G~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
|+|+|+ |..|..++.+|+++|++|.++.|..
T Consensus 3 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 799997 9999999999999999999998854
No 394
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=74.04 E-value=2.6 Score=48.16 Aligned_cols=34 Identities=21% Similarity=0.479 Sum_probs=30.5
Q ss_pred cccEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
..-|+|||+|..|+.+|..|+.+|. ++.|+|...
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 4679999999999999999999995 789998765
No 395
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=74.04 E-value=2.5 Score=46.85 Aligned_cols=33 Identities=21% Similarity=0.205 Sum_probs=30.1
Q ss_pred ccEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
-.|+|||+|..|+=+|..|.+.|. +|.++++.+
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 479999999999999999999997 599999876
No 396
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=74.03 E-value=2.6 Score=45.99 Aligned_cols=33 Identities=21% Similarity=0.348 Sum_probs=29.8
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
--|+|||+|.+|..+|..|...|.+|+++++..
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 358999999999999999999999999999854
No 397
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=73.97 E-value=2.6 Score=47.13 Aligned_cols=32 Identities=28% Similarity=0.452 Sum_probs=29.3
Q ss_pred cEEEECCCchHHHHHHHHHhC--CCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKA--GYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~--G~kVlVLEkG~ 304 (781)
.|.|||.|..|+..|..|+++ |++|+++++..
T Consensus 11 kI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 11 KVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 599999999999999999998 79999998753
No 398
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=73.83 E-value=2.3 Score=43.08 Aligned_cols=29 Identities=21% Similarity=0.234 Sum_probs=26.9
Q ss_pred EEEECCCchHHHHHHHHHhCCCeEEEEcC
Q 003990 274 AVVVGSGSGGGLIAGVLAKAGYKVLVLEK 302 (781)
Q Consensus 274 VIVVGsG~~G~vaA~~LA~~G~kVlVLEk 302 (781)
|.|||.|..|...|..|++.|++|.+.++
T Consensus 3 I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 3 VGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred EEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 78999999999999999999999999765
No 399
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=73.76 E-value=2.2 Score=44.18 Aligned_cols=30 Identities=23% Similarity=0.440 Sum_probs=27.8
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKG 303 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG 303 (781)
-++|+|+|..|..+|..|++.| +|+|+.+.
T Consensus 130 ~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 130 NIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp EEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 4899999999999999999999 99999874
No 400
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=73.73 E-value=2.6 Score=46.73 Aligned_cols=56 Identities=14% Similarity=0.089 Sum_probs=37.7
Q ss_pred CCCeEEecCcEEEEEEccCCCCcceEEEEEEEEee--C--------CceeEEEEeccEEEEeccCCCCH
Q 003990 457 SGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQY--M--------GAKDICVVESKVTIVACGALSTP 515 (781)
Q Consensus 457 ~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~--~--------g~g~~~~i~Ak~VVLAaGai~Tp 515 (781)
++ ++|++++.+.+|..++++ .++.+|.+.... . .+++..++.++.||+|+|--.++
T Consensus 270 ~g-v~~~~~~~~~~i~~~~~~--~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~ 335 (460)
T 1cjc_A 270 RA-WGLRFFRSPQQVLPSPDG--RRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP 335 (460)
T ss_dssp EE-EEEECSEEEEEEEECTTS--SSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCC
T ss_pred ce-EEEECCCChheEEcCCCC--ceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCC
Confidence 44 999999999998765311 057777765311 0 02344678999999999965444
No 401
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=73.56 E-value=3 Score=43.13 Aligned_cols=32 Identities=25% Similarity=0.253 Sum_probs=29.4
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.|.|||.|..|...|..|++.|++|.++++..
T Consensus 6 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 6 KIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp EEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 58999999999999999999999999998753
No 402
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=73.54 E-value=2.7 Score=43.10 Aligned_cols=30 Identities=30% Similarity=0.455 Sum_probs=27.9
Q ss_pred EEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 274 AVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 274 VIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
|.|||.|..|...|..|++ |++|.++++..
T Consensus 4 i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 4 VAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp EEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred EEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 7899999999999999999 99999998754
No 403
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=73.47 E-value=2.2 Score=44.62 Aligned_cols=31 Identities=23% Similarity=0.313 Sum_probs=29.3
Q ss_pred cEEEECCCchHHHHHHHHHhCCC-eEEEEcCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKG 303 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG 303 (781)
.|.|||.|..|...|..|+++|+ +|.+.++.
T Consensus 26 ~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 26 KLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred EEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 58999999999999999999999 99999985
No 404
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=73.45 E-value=2.5 Score=47.20 Aligned_cols=32 Identities=38% Similarity=0.487 Sum_probs=29.5
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.|.|||.|..|...|..|+++|++|.+.++..
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 58999999999999999999999999998753
No 405
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=73.44 E-value=2.6 Score=48.03 Aligned_cols=34 Identities=21% Similarity=0.479 Sum_probs=30.4
Q ss_pred cccEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
..-|+|||+|..|+.+|..|+.+|. ++.|+|...
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~ 361 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 361 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 4679999999999999999999996 799998764
No 406
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=73.40 E-value=2.8 Score=41.43 Aligned_cols=32 Identities=19% Similarity=0.345 Sum_probs=29.2
Q ss_pred cEEEECC-CchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGS-GSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGs-G~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-|+|.|+ |..|..+|.+|+++|++|+++.|..
T Consensus 23 ~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 23 RVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred eEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 3899997 9999999999999999999998864
No 407
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=73.38 E-value=2.8 Score=40.04 Aligned_cols=32 Identities=31% Similarity=0.475 Sum_probs=29.2
Q ss_pred cEEEECC-CchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGS-GSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGs-G~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-|+|+|+ |..|..++..|.++|++|.++.+..
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 3899998 9999999999999999999998864
No 408
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=73.36 E-value=2.8 Score=45.01 Aligned_cols=30 Identities=23% Similarity=0.293 Sum_probs=28.3
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEK 302 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEk 302 (781)
-|+|+|.|..|..+|..|.+.|.+|++.+.
T Consensus 175 tV~V~G~G~VG~~~A~~L~~~GakVvv~D~ 204 (364)
T 1leh_A 175 AVSVQGLGNVAKALCKKLNTEGAKLVVTDV 204 (364)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred EEEEECchHHHHHHHHHHHHCCCEEEEEcC
Confidence 489999999999999999999999999885
No 409
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=73.34 E-value=1.8 Score=47.84 Aligned_cols=33 Identities=18% Similarity=0.256 Sum_probs=30.1
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
-|.|||.|.+|..+|..|++.|++|.+.|....
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred EEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 389999999999999999999999999998653
No 410
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=73.31 E-value=2.4 Score=49.94 Aligned_cols=32 Identities=31% Similarity=0.399 Sum_probs=30.0
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-|-|||+|..|.-+|..+|.+|++|+++|...
T Consensus 318 ~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 318 SVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred EEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 68999999999999999999999999999754
No 411
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=72.94 E-value=2.1 Score=50.44 Aligned_cols=32 Identities=34% Similarity=0.410 Sum_probs=29.9
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-|.|||+|..|..+|..|+++|++|++.|+..
T Consensus 316 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 316 QAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 49999999999999999999999999999864
No 412
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=72.72 E-value=2.5 Score=43.00 Aligned_cols=32 Identities=16% Similarity=0.397 Sum_probs=29.6
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-|+|+|+|..|..++.+|.++|++|.++.|..
T Consensus 7 ~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 7 TLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp EEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 49999999999999999999999999998854
No 413
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=72.71 E-value=2.8 Score=43.18 Aligned_cols=31 Identities=32% Similarity=0.412 Sum_probs=28.6
Q ss_pred cEEEEC-CCchHHHHHHHHHhCCCeEEEEcCC
Q 003990 273 DAVVVG-SGSGGGLIAGVLAKAGYKVLVLEKG 303 (781)
Q Consensus 273 DVIVVG-sG~~G~vaA~~LA~~G~kVlVLEkG 303 (781)
-++|+| +|..|..+|..|++.|.+|+++.+.
T Consensus 121 ~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 121 KAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 489999 9999999999999999999999874
No 414
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=72.62 E-value=3.1 Score=43.01 Aligned_cols=33 Identities=30% Similarity=0.387 Sum_probs=29.2
Q ss_pred ccEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
--++|+|+|.+|..+|..|++.|. +|.|+.|..
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 358999999999999999999998 699998753
No 415
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=72.39 E-value=3.1 Score=44.56 Aligned_cols=34 Identities=21% Similarity=0.283 Sum_probs=30.9
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.-.|.|||.|..|...|..|+++|++|.+.++..
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3479999999999999999999999999998854
No 416
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=72.39 E-value=2.9 Score=44.44 Aligned_cols=32 Identities=22% Similarity=0.283 Sum_probs=29.5
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-|.|||.|..|...|..|.++|++|++.++..
T Consensus 10 kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 10 PVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred EEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 48999999999999999999999999998754
No 417
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=72.34 E-value=2.9 Score=45.15 Aligned_cols=33 Identities=33% Similarity=0.453 Sum_probs=29.8
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
--|+|||+|..|..+|..|...|.+|+++++..
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 359999999999999999999999999998753
No 418
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=72.32 E-value=2.8 Score=46.82 Aligned_cols=34 Identities=26% Similarity=0.333 Sum_probs=30.9
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
+-+|.|||.|..|...|..|+++|++|.+.++..
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4579999999999999999999999999998753
No 419
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=72.26 E-value=3 Score=43.82 Aligned_cols=32 Identities=16% Similarity=0.274 Sum_probs=29.1
Q ss_pred ccEEEECCCchHHHHHHHHHhCCC-eEEEEcCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKG 303 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG 303 (781)
--++|+|+|.+|..+|..|++.|. +|.|+.|.
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 358999999999999999999998 89999875
No 420
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=72.12 E-value=2.5 Score=45.28 Aligned_cols=34 Identities=21% Similarity=0.564 Sum_probs=30.1
Q ss_pred cccEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
..-|+|||+|..|+.+|..|+.+|. ++.|+|...
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 3569999999999999999999995 799998754
No 421
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=72.11 E-value=3 Score=46.57 Aligned_cols=32 Identities=16% Similarity=0.263 Sum_probs=29.8
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.|.|||.|..|...|..|+++|++|.+.++..
T Consensus 4 ~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 4 DIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 58999999999999999999999999998854
No 422
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=72.04 E-value=3.2 Score=46.54 Aligned_cols=35 Identities=17% Similarity=0.221 Sum_probs=31.8
Q ss_pred CcccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 270 IKCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 270 ~~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
....|.|||.|..|...|..|+++|++|.+.++..
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45679999999999999999999999999998864
No 423
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=71.91 E-value=3.2 Score=43.43 Aligned_cols=32 Identities=22% Similarity=0.315 Sum_probs=28.9
Q ss_pred cEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
-|.|||+|..|..+|..|+..|+ +|.++|...
T Consensus 4 kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 48999999999999999999997 999999753
No 424
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=71.80 E-value=2.6 Score=49.74 Aligned_cols=32 Identities=22% Similarity=0.172 Sum_probs=30.3
Q ss_pred cEEEEC--CCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVG--SGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVG--sG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.|+||| +|..|+-+|..|++.|.+|.|+|+++
T Consensus 530 ~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 530 RVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp EEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred eEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 699998 99999999999999999999999976
No 425
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=71.46 E-value=2.8 Score=43.08 Aligned_cols=32 Identities=25% Similarity=0.444 Sum_probs=29.4
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.++|||+|..|..+|..|++.|.+|.+.++..
T Consensus 131 ~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 131 SILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 58999999999999999999999999998753
No 426
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=71.44 E-value=3.2 Score=44.88 Aligned_cols=33 Identities=18% Similarity=0.259 Sum_probs=29.9
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-.|+|||+|..|..+|..|...|.+|++.++..
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 369999999999999999999999999999864
No 427
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=71.32 E-value=2.6 Score=44.96 Aligned_cols=34 Identities=26% Similarity=0.296 Sum_probs=30.4
Q ss_pred cccEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
...|+|||.|..|+.+|..|+.+|. ++.|+|-..
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~ 70 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQ 70 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 4689999999999999999999996 799998654
No 428
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=71.02 E-value=3.3 Score=42.00 Aligned_cols=32 Identities=25% Similarity=0.412 Sum_probs=29.4
Q ss_pred cEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
-++|||+|.+|..+|+.|++.|. +|.|..|-.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 69999999999999999999997 899998853
No 429
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=70.93 E-value=2.8 Score=43.23 Aligned_cols=33 Identities=21% Similarity=0.220 Sum_probs=29.6
Q ss_pred ccEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
--++|||+|.+|..+|..|++.|. +|.|+.|..
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 358999999999999999999998 899998764
No 430
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=70.76 E-value=4.1 Score=45.52 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=29.2
Q ss_pred cEEEECCCchHHHHHHHHHh----CCCeEEEEcCCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAK----AGYKVLVLEKGSY 305 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~----~G~kVlVLEkG~~ 305 (781)
.|+|||+|..|+-+|..|++ .|.+|.++++.+.
T Consensus 182 ~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~ 218 (493)
T 1m6i_A 182 SITIIGGGFLGSELACALGRKARALGTEVIQLFPEKG 218 (493)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred eEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcc
Confidence 59999999999999999987 4789999998753
No 431
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=70.72 E-value=5.2 Score=41.33 Aligned_cols=31 Identities=23% Similarity=0.191 Sum_probs=27.4
Q ss_pred cEEEECCC---chHHHHHHHHHhCCCeEEEEcCC
Q 003990 273 DAVVVGSG---SGGGLIAGVLAKAGYKVLVLEKG 303 (781)
Q Consensus 273 DVIVVGsG---~~G~vaA~~LA~~G~kVlVLEkG 303 (781)
=+||.|++ ..|..+|.+|++.|.+|+++.+.
T Consensus 32 ~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 32 KGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCC
Confidence 37888985 78999999999999999999875
No 432
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=70.36 E-value=3.8 Score=42.07 Aligned_cols=32 Identities=13% Similarity=0.209 Sum_probs=28.7
Q ss_pred ccEEEECCCchHHHHHHHHHhCCC-eEEEEcCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKG 303 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG 303 (781)
--++|+|+|.+|..+|..|++.|. +|.|+.|-
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 358999999999999999999995 99999875
No 433
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=70.23 E-value=3.2 Score=46.13 Aligned_cols=32 Identities=25% Similarity=0.435 Sum_probs=29.4
Q ss_pred cEEEECCCchHHHHHHHHHhC--CCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKA--GYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~--G~kVlVLEkG~ 304 (781)
.|.|||.|..|+..|..|+++ |++|+++++..
T Consensus 7 kI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 7 KICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 599999999999999999998 89999998753
No 434
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=70.18 E-value=3.9 Score=40.59 Aligned_cols=31 Identities=29% Similarity=0.546 Sum_probs=27.9
Q ss_pred EEEECC-CchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 274 AVVVGS-GSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 274 VIVVGs-G~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
|+|.|+ |..|..+|.+|+++|++|+++.+..
T Consensus 4 vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~ 35 (255)
T 2dkn_A 4 IAITGSASGIGAALKELLARAGHTVIGIDRGQ 35 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 788886 8899999999999999999998864
No 435
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=70.16 E-value=3.6 Score=42.61 Aligned_cols=33 Identities=33% Similarity=0.348 Sum_probs=30.0
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
--|.|||.|..|..+|..|...|.+|++.++..
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 359999999999999999999999999998753
No 436
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=70.05 E-value=4.7 Score=40.64 Aligned_cols=32 Identities=19% Similarity=0.179 Sum_probs=28.2
Q ss_pred cEEEECC-C-chHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGS-G-SGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGs-G-~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
=|+|.|+ | ..|..+|.+|+++|.+|+++.+..
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 3889998 7 599999999999999999998753
No 437
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=69.91 E-value=2.9 Score=42.20 Aligned_cols=32 Identities=19% Similarity=0.215 Sum_probs=29.1
Q ss_pred cEEEECCCchHHHHHHHHHhCC----CeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAG----YKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G----~kVlVLEkG~ 304 (781)
-|.|||.|..|...|..|+++| ++|.+.++..
T Consensus 6 ~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 6 KLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSK 41 (262)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence 4899999999999999999999 7999998864
No 438
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=69.42 E-value=4 Score=43.30 Aligned_cols=32 Identities=28% Similarity=0.339 Sum_probs=29.1
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-|.|||.|..|...|..|++.|++|++.++..
T Consensus 18 ~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 18 KVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred EEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 38999999999999999999999999988753
No 439
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=69.37 E-value=3.8 Score=42.56 Aligned_cols=33 Identities=33% Similarity=0.375 Sum_probs=29.9
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
--+.|||.|..|..+|..|...|.+|++.++..
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 358999999999999999999999999998753
No 440
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=69.32 E-value=4 Score=39.79 Aligned_cols=31 Identities=10% Similarity=0.231 Sum_probs=28.1
Q ss_pred EEEEC-CCchHHHHHHHHH-hCCCeEEEEcCCC
Q 003990 274 AVVVG-SGSGGGLIAGVLA-KAGYKVLVLEKGS 304 (781)
Q Consensus 274 VIVVG-sG~~G~vaA~~LA-~~G~kVlVLEkG~ 304 (781)
|+|+| +|..|..+|.+|+ +.|++|+++.+..
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 89999 5999999999999 8999999998853
No 441
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=68.95 E-value=3.5 Score=45.34 Aligned_cols=34 Identities=26% Similarity=0.587 Sum_probs=29.8
Q ss_pred cccEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
..-|+|||+|..|+.+|..|+.+|. ++.|+|...
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~ 74 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDT 74 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCB
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 3569999999999999999999996 799998653
No 442
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=68.91 E-value=5.8 Score=45.90 Aligned_cols=57 Identities=12% Similarity=0.007 Sum_probs=40.5
Q ss_pred chhhhchHHHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccC
Q 003990 445 GTSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGA 511 (781)
Q Consensus 445 s~~~~~L~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGa 511 (781)
....++.+.+...| ++|++++.|++|+.+++ .++++||... +| + +|+||.||..+..
T Consensus 379 ~L~qaL~r~~~~~G-g~i~l~~~V~~I~~~~~--~g~v~gV~~~---~G--e--~i~A~~VVs~~~~ 435 (650)
T 1vg0_A 379 ELPQCFCRMCAVFG-GIYCLRHSVQCLVVDKE--SRKCKAVIDQ---FG--Q--RIISKHFIIEDSY 435 (650)
T ss_dssp HHHHHHHHHHHHTT-CEEESSCCEEEEEEETT--TCCEEEEEET---TS--C--EEECSEEEEEGGG
T ss_pred HHHHHHHHHHHHcC-CEEEeCCEeeEEEEeCC--CCeEEEEEeC---CC--C--EEEcCEEEEChhh
Confidence 34455556666777 99999999999998762 0189998732 12 2 6789999986664
No 443
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=68.89 E-value=3.5 Score=40.20 Aligned_cols=31 Identities=19% Similarity=0.372 Sum_probs=28.7
Q ss_pred EEEEC-CCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 274 AVVVG-SGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 274 VIVVG-sG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
|+|+| +|..|..++.+|+++|++|+++.|..
T Consensus 3 ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTSSCEEEEEESSG
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 78999 79999999999999999999999864
No 444
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=68.64 E-value=4.1 Score=41.34 Aligned_cols=32 Identities=34% Similarity=0.540 Sum_probs=29.5
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.++|||+|..|..+|..|.+.|.+|.+.++..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999998753
No 445
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=68.63 E-value=3.5 Score=45.74 Aligned_cols=31 Identities=29% Similarity=0.368 Sum_probs=29.1
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKG 303 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG 303 (781)
-|+|||+|-.|...|..|.+.|.+|.|++..
T Consensus 14 ~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 14 DCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 4899999999999999999999999999874
No 446
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=68.59 E-value=3.3 Score=41.93 Aligned_cols=32 Identities=25% Similarity=0.458 Sum_probs=28.9
Q ss_pred cEEEECCCchHHHHHHHHHhCCCe-EEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYK-VLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~k-VlVLEkG~ 304 (781)
-|.|||+|..|...|..|++.|++ |.+.++..
T Consensus 12 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 12 PIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred eEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 589999999999999999999998 88988753
No 447
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=68.58 E-value=4 Score=42.14 Aligned_cols=33 Identities=12% Similarity=0.188 Sum_probs=29.1
Q ss_pred ccEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
--++|+|+|.+|..+|..|++.|. +|.|+.|..
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred CEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 358999999999999999999995 999998753
No 448
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=68.55 E-value=3.9 Score=42.96 Aligned_cols=32 Identities=19% Similarity=0.209 Sum_probs=29.4
Q ss_pred cEEEECCCchHHHHHHHHHhCC----CeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAG----YKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G----~kVlVLEkG~ 304 (781)
.|.|||+|..|...|..|+++| ++|.+.++..
T Consensus 24 kI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 24 SVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 5999999999999999999999 8999998764
No 449
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=68.52 E-value=4.2 Score=42.87 Aligned_cols=33 Identities=21% Similarity=0.372 Sum_probs=30.0
Q ss_pred ccEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
--|.|||+|..|..+|..|+..|+ .|.++|.-.
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 359999999999999999999998 999999854
No 450
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=68.39 E-value=3.8 Score=45.66 Aligned_cols=33 Identities=24% Similarity=0.318 Sum_probs=30.3
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
..|.|||.|..|...|..|+++|++|.+.++..
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 469999999999999999999999999998753
No 451
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=67.89 E-value=4.3 Score=42.58 Aligned_cols=32 Identities=19% Similarity=0.355 Sum_probs=29.0
Q ss_pred ccEEEECCCchHHHHHHHHHhCCC-eEEEEcCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKG 303 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG 303 (781)
--++|+|+|.+|..+|+.|++.|. +|.|+.|-
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 358999999999999999999997 89999886
No 452
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=67.84 E-value=4.7 Score=42.44 Aligned_cols=32 Identities=19% Similarity=0.225 Sum_probs=28.7
Q ss_pred cEEEECCCchHHH-HHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGL-IAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~v-aA~~LA~~G~kVlVLEkG~ 304 (781)
-|.|||.|..|+. +|..|.+.|++|.+.|+..
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4899999999996 7888899999999999875
No 453
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=67.81 E-value=3.1 Score=42.82 Aligned_cols=29 Identities=31% Similarity=0.314 Sum_probs=27.3
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEc
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLE 301 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLE 301 (781)
-|.|||.|..|...|..|++.|++|.+.+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARAGHQLHVTT 33 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHTTCEEEECC
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEEc
Confidence 48999999999999999999999999987
No 454
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=67.77 E-value=4.4 Score=41.74 Aligned_cols=33 Identities=30% Similarity=0.431 Sum_probs=30.1
Q ss_pred cEEEECC-CchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 273 DAVVVGS-GSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 273 DVIVVGs-G~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
-|+|.|+ |..|..++.+|.+.|++|+++.+...
T Consensus 9 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 9 RILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred eEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 4899998 99999999999999999999998753
No 455
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=67.74 E-value=5.7 Score=42.23 Aligned_cols=32 Identities=31% Similarity=0.332 Sum_probs=28.9
Q ss_pred EEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 274 AVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 274 VIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
|+|||||.-|..+|+.+.+.|++|++++..+.
T Consensus 4 I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 4 ICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 79999999999999998899999999987653
No 456
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=67.48 E-value=4.1 Score=46.38 Aligned_cols=34 Identities=15% Similarity=0.250 Sum_probs=31.7
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSY 305 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~ 305 (781)
-.|||||.|-.|..+|..|.+.|++|+++|+.+.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChH
Confidence 4699999999999999999999999999999764
No 457
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=67.25 E-value=3.8 Score=42.81 Aligned_cols=33 Identities=21% Similarity=0.330 Sum_probs=29.4
Q ss_pred ccEEEECCCchHHHHHHHHHhCCC--eEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGY--KVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~--kVlVLEkG~ 304 (781)
.-|.|||+|..|..+|+.|+..|+ .|.++|...
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 459999999999999999999998 999999864
No 458
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=67.18 E-value=4.9 Score=40.90 Aligned_cols=31 Identities=19% Similarity=0.045 Sum_probs=27.8
Q ss_pred EEEECC---CchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 274 AVVVGS---GSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 274 VIVVGs---G~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
|+|.|+ |..|..+|.+|++.|.+|+++.+..
T Consensus 9 vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~ 42 (275)
T 2pd4_A 9 GLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE 42 (275)
T ss_dssp EEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred EEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 789997 6889999999999999999998754
No 459
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=67.09 E-value=4.6 Score=45.08 Aligned_cols=33 Identities=15% Similarity=0.260 Sum_probs=30.6
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-+|-|||.|..|...|..|+++|++|.+.++..
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 368999999999999999999999999998864
No 460
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=67.02 E-value=4.5 Score=40.53 Aligned_cols=32 Identities=13% Similarity=0.288 Sum_probs=29.2
Q ss_pred cEEEECCCchHHHHHHHHHhCCC----eEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGY----KVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~----kVlVLEkG~ 304 (781)
-|.|||.|..|...|..|+++|+ +|.+.++..
T Consensus 4 ~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 4 QIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred eEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 38899999999999999999998 999998854
No 461
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=66.70 E-value=4.3 Score=49.90 Aligned_cols=32 Identities=19% Similarity=0.286 Sum_probs=30.2
Q ss_pred cEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
.|||||+|..|+=+|..|++.|. +|.|+++.+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 79999999999999999999996 899999986
No 462
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=66.49 E-value=8.1 Score=39.51 Aligned_cols=32 Identities=34% Similarity=0.489 Sum_probs=28.0
Q ss_pred ccEEEECCCchHHHHHHHHHhCCC-eEEEEcCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKG 303 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG 303 (781)
-.++|+|+|.++-.+++.|++.|. +|.|+.|-
T Consensus 126 ~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt 158 (269)
T 3tum_A 126 KRALVIGCGGVGSAIAYALAEAGIASITLCDPS 158 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred CeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCC
Confidence 358999999999999999999984 78888764
No 463
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=66.41 E-value=4 Score=42.39 Aligned_cols=31 Identities=16% Similarity=0.073 Sum_probs=28.5
Q ss_pred EEEECCCchHHHHHHHHHhCCC--eEEEEcCCC
Q 003990 274 AVVVGSGSGGGLIAGVLAKAGY--KVLVLEKGS 304 (781)
Q Consensus 274 VIVVGsG~~G~vaA~~LA~~G~--kVlVLEkG~ 304 (781)
|.|||+|..|..+|..|+..|+ +|.++|.-.
T Consensus 3 I~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 3 LGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 7899999999999999999998 899999854
No 464
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=66.37 E-value=4.9 Score=41.22 Aligned_cols=31 Identities=19% Similarity=0.471 Sum_probs=28.5
Q ss_pred cEEEECCCchHHHHHHHHHhCCC-eEEEEcCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKG 303 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG 303 (781)
.++|||+|.+|..+|+.|++.|. +|.|+.|-
T Consensus 121 ~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 121 KVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp CEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred EEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 58999999999999999999996 79999875
No 465
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=66.20 E-value=4.1 Score=43.04 Aligned_cols=31 Identities=23% Similarity=0.403 Sum_probs=28.4
Q ss_pred cEEEECCCchHHHHHHHHHhCCC--eEEEEcCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGY--KVLVLEKG 303 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~--kVlVLEkG 303 (781)
-|.|||+|..|..+|..|+..|+ .|.++|.-
T Consensus 7 kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 7 KVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 48999999999999999999987 89999974
No 466
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=65.86 E-value=5.1 Score=42.34 Aligned_cols=32 Identities=19% Similarity=0.150 Sum_probs=28.9
Q ss_pred ccEEEECCCchHHHHHHHHHhCCC--eEEEEcCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGY--KVLVLEKG 303 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~--kVlVLEkG 303 (781)
--|.|||+|..|..+|+.|+..|+ .|.++|.-
T Consensus 20 ~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 20 NKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 469999999999999999999987 89999974
No 467
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=65.82 E-value=4.8 Score=44.97 Aligned_cols=33 Identities=24% Similarity=0.269 Sum_probs=30.0
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
--|+|||.|..|..+|..|...|.+|++.|+.+
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 359999999999999999999999999999854
No 468
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=65.81 E-value=5.1 Score=42.07 Aligned_cols=33 Identities=21% Similarity=0.305 Sum_probs=29.4
Q ss_pred cccEEEECCC-chHHHHHHHHHhCCCeEEEEcCC
Q 003990 271 KCDAVVVGSG-SGGGLIAGVLAKAGYKVLVLEKG 303 (781)
Q Consensus 271 ~~DVIVVGsG-~~G~vaA~~LA~~G~kVlVLEkG 303 (781)
.-.++|||+| ..|-.+|..|...|.+|.|+++.
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 3579999999 57999999999999999999775
No 469
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=65.75 E-value=5.1 Score=39.64 Aligned_cols=30 Identities=27% Similarity=0.338 Sum_probs=27.1
Q ss_pred EEEECC-CchHHHHHHHHHhCCCeEEEEcCC
Q 003990 274 AVVVGS-GSGGGLIAGVLAKAGYKVLVLEKG 303 (781)
Q Consensus 274 VIVVGs-G~~G~vaA~~LA~~G~kVlVLEkG 303 (781)
|+|.|+ |..|..+|.+|++.|++|+++.+.
T Consensus 10 vlVTGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 10 ALVTGAGKGIGRDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 788887 788999999999999999999875
No 470
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=65.56 E-value=5.2 Score=42.08 Aligned_cols=32 Identities=22% Similarity=0.397 Sum_probs=29.3
Q ss_pred cEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
-|.|||+|..|..+|..|+..|+ +|.++|.-.
T Consensus 7 kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 7 KITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 58999999999999999999988 999999864
No 471
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=65.44 E-value=4.3 Score=39.62 Aligned_cols=32 Identities=22% Similarity=0.394 Sum_probs=29.2
Q ss_pred cEEEEC-CCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVG-SGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVG-sG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-|+|+| +|..|..++.+|.++|++|.++.|..
T Consensus 6 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 6 KIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp EEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 489999 59999999999999999999999864
No 472
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=65.29 E-value=5.5 Score=40.94 Aligned_cols=31 Identities=35% Similarity=0.539 Sum_probs=28.6
Q ss_pred EEEECC-CchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 274 AVVVGS-GSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 274 VIVVGs-G~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
|+|.|+ |..|..++.+|+++|++|.++.+..
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 34 (312)
T 3ko8_A 3 IVVTGGAGFIGSHLVDKLVELGYEVVVVDNLS 34 (312)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEECCCS
T ss_pred EEEECCCChHHHHHHHHHHhCCCEEEEEeCCC
Confidence 789998 9999999999999999999998764
No 473
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=65.20 E-value=4.7 Score=40.60 Aligned_cols=32 Identities=13% Similarity=0.171 Sum_probs=29.2
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.|.|||.|..|...|..|++.|++|.+.++..
T Consensus 5 ~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 5 KIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp EEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 58999999999999999999999999998753
No 474
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=65.17 E-value=4.9 Score=40.70 Aligned_cols=31 Identities=23% Similarity=0.176 Sum_probs=27.6
Q ss_pred EEEEC---CCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 274 AVVVG---SGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 274 VIVVG---sG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
++|.| +|..|..+|.+|++.|.+|+++.+..
T Consensus 10 vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~ 43 (269)
T 2h7i_A 10 ILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR 43 (269)
T ss_dssp EEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC
T ss_pred EEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh
Confidence 78999 48889999999999999999998753
No 475
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=65.15 E-value=5.6 Score=41.43 Aligned_cols=31 Identities=32% Similarity=0.610 Sum_probs=28.7
Q ss_pred EEEECC-CchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 274 AVVVGS-GSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 274 VIVVGs-G~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
|+|.|+ |..|..+|.+|+++|++|+++.+..
T Consensus 6 vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~ 37 (345)
T 2z1m_A 6 ALITGIRGQDGAYLAKLLLEKGYEVYGADRRS 37 (345)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEECSCC
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEECCC
Confidence 899997 9999999999999999999998864
No 476
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=65.14 E-value=4.4 Score=42.83 Aligned_cols=32 Identities=19% Similarity=0.083 Sum_probs=29.0
Q ss_pred ccEEEECCCchHHHHHHHHHhCCC--eEEEEcCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGY--KVLVLEKG 303 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~--kVlVLEkG 303 (781)
--|.|||+|..|..+|+.|+..|+ .|.++|..
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 359999999999999999999997 89999974
No 477
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=65.10 E-value=4.7 Score=44.58 Aligned_cols=31 Identities=29% Similarity=0.330 Sum_probs=28.6
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKG 303 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG 303 (781)
-|+|+|+|..|..+|..|++.|.+|.++++.
T Consensus 5 ~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~ 35 (450)
T 1ff9_A 5 SVLMLGSGFVTRPTLDVLTDSGIKVTVACRT 35 (450)
T ss_dssp EEEEECCSTTHHHHHHHHHTTTCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhCcCEEEEEECC
Confidence 3899999999999999999999999999875
No 478
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=65.07 E-value=5.8 Score=41.94 Aligned_cols=32 Identities=19% Similarity=0.228 Sum_probs=29.6
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-+.|||.|..|..+|..|+..|.+|++.++..
T Consensus 152 ~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 152 TIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 48999999999999999999999999998754
No 479
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=65.05 E-value=4.2 Score=46.03 Aligned_cols=35 Identities=23% Similarity=0.355 Sum_probs=31.8
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYC 306 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~ 306 (781)
-.|+|||+|..|+-+|..|++.|.+|.|+++.+.+
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHF 221 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcc
Confidence 46999999999999999999999999999998743
No 480
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=65.02 E-value=5.3 Score=43.62 Aligned_cols=34 Identities=29% Similarity=0.255 Sum_probs=30.5
Q ss_pred cccEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
.--|+|||.|..|..+|..|...|.+|++.|+.+
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3468999999999999999999999999999753
No 481
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=64.90 E-value=5.3 Score=41.86 Aligned_cols=32 Identities=25% Similarity=0.310 Sum_probs=29.5
Q ss_pred cEEEECC-CchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGS-GSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGs-G~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-|+|.|+ |..|..++..|.+.|++|+++.+..
T Consensus 21 ~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~ 53 (347)
T 4id9_A 21 MILVTGSAGRVGRAVVAALRTQGRTVRGFDLRP 53 (347)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred EEEEECCCChHHHHHHHHHHhCCCEEEEEeCCC
Confidence 3899998 9999999999999999999998865
No 482
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=64.77 E-value=5.3 Score=42.63 Aligned_cols=31 Identities=35% Similarity=0.551 Sum_probs=28.6
Q ss_pred ccEEEECCCchHHHHHHHHHhCCCeEEEEcC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGYKVLVLEK 302 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~kVlVLEk 302 (781)
--|+|+|.|..|..+|..|.+.|.+|++.|.
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~GakVvvsD~ 206 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAGAQLLVADT 206 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeC
Confidence 4589999999999999999999999999875
No 483
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=64.74 E-value=5.3 Score=37.48 Aligned_cols=59 Identities=20% Similarity=0.175 Sum_probs=39.7
Q ss_pred hchHHH-hhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHHHHHcCCC
Q 003990 449 TWLVDL-VNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLK 524 (781)
Q Consensus 449 ~~L~~a-~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~LLl~SGi~ 524 (781)
.++... .+.| ++++++ +|++|..+++ . +.+.. .++ ++.++.||+|+|.. |.++...|+.
T Consensus 60 ~~l~~~~~~~g-v~v~~~-~v~~i~~~~~----~---~~v~~---~~g---~i~ad~vI~A~G~~--~~~~~~~g~~ 119 (180)
T 2ywl_A 60 RRLEAHARRYG-AEVRPG-VVKGVRDMGG----V---FEVET---EEG---VEKAERLLLCTHKD--PTLPSLLGLT 119 (180)
T ss_dssp HHHHHHHHHTT-CEEEEC-CCCEEEECSS----S---EEEEC---SSC---EEEEEEEEECCTTC--CHHHHHHTCC
T ss_pred HHHHHHHHHcC-CEEEeC-EEEEEEEcCC----E---EEEEE---CCC---EEEECEEEECCCCC--CCccccCCCC
Confidence 344443 4455 999999 9999987653 2 22222 112 68999999999974 5677777774
No 484
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=68.35 E-value=1.4 Score=43.17 Aligned_cols=32 Identities=19% Similarity=0.352 Sum_probs=29.1
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
-+.|||.|..|...|..|++.|++|.++++..
T Consensus 21 ~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 52 (201)
T 2yjz_A 21 VVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNP 52 (201)
Confidence 48899999999999999999999999988754
No 485
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=64.52 E-value=5.7 Score=39.87 Aligned_cols=31 Identities=32% Similarity=0.553 Sum_probs=26.6
Q ss_pred EEEECCC-chHHHHHHHHHhCCCeEEEEcCCC
Q 003990 274 AVVVGSG-SGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 274 VIVVGsG-~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
++|.|++ ..|..+|.+|+++|.+|+++.+..
T Consensus 12 vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~ 43 (261)
T 3n74_A 12 ALITGAGSGFGEGMAKRFAKGGAKVVIVDRDK 43 (261)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEcCCH
Confidence 7888875 459999999999999999998753
No 486
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=64.49 E-value=4.4 Score=44.53 Aligned_cols=30 Identities=30% Similarity=0.452 Sum_probs=27.9
Q ss_pred ccEEEECCCchHHHHHHHHHhCCC---eEEEEc
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGY---KVLVLE 301 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~---kVlVLE 301 (781)
--|+|+|+|.+|..+|..|.+.|. +|.|++
T Consensus 187 ~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 187 ITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 459999999999999999999997 799998
No 487
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=64.34 E-value=5.6 Score=39.37 Aligned_cols=30 Identities=20% Similarity=0.302 Sum_probs=27.0
Q ss_pred EEEECC-CchHHHHHHHHHhCCCeEEEEcCC
Q 003990 274 AVVVGS-GSGGGLIAGVLAKAGYKVLVLEKG 303 (781)
Q Consensus 274 VIVVGs-G~~G~vaA~~LA~~G~kVlVLEkG 303 (781)
|+|.|+ |..|..+|.+|++.|++|+++.+.
T Consensus 10 vlITGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 3d3w_A 10 VLVTGAGKGIGRGTVQALHATGARVVAVSRT 40 (244)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 788886 789999999999999999999875
No 488
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=64.29 E-value=5.5 Score=41.84 Aligned_cols=33 Identities=15% Similarity=0.219 Sum_probs=29.5
Q ss_pred ccEEEECCCchHHHHHHHHHhCCC--eEEEEcCCC
Q 003990 272 CDAVVVGSGSGGGLIAGVLAKAGY--KVLVLEKGS 304 (781)
Q Consensus 272 ~DVIVVGsG~~G~vaA~~LA~~G~--kVlVLEkG~ 304 (781)
.-|.|||+|..|..+|..|+..|+ .|.++|.-.
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 469999999999999999999987 899999753
No 489
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=64.17 E-value=6.1 Score=39.79 Aligned_cols=30 Identities=30% Similarity=0.297 Sum_probs=26.2
Q ss_pred EEEECCC-c--hHHHHHHHHHhCCCeEEEEcCC
Q 003990 274 AVVVGSG-S--GGGLIAGVLAKAGYKVLVLEKG 303 (781)
Q Consensus 274 VIVVGsG-~--~G~vaA~~LA~~G~kVlVLEkG 303 (781)
++|.|++ . .|..+|.+|++.|.+|+++.+.
T Consensus 10 vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~ 42 (266)
T 3oig_A 10 IVVMGVANKRSIAWGIARSLHEAGARLIFTYAG 42 (266)
T ss_dssp EEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCc
Confidence 7888874 4 7999999999999999999775
No 490
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=63.93 E-value=3.2 Score=50.63 Aligned_cols=34 Identities=21% Similarity=0.142 Sum_probs=31.5
Q ss_pred cEEEECCCchHHHHHHHHHhCCCeEEEEcCCCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGYKVLVLEKGSYC 306 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~kVlVLEkG~~~ 306 (781)
.|+|||+|..|+-+|..|++.|.+|.|||+.+..
T Consensus 286 ~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~ 319 (965)
T 2gag_A 286 RIAVATTNDSAYELVRELAATGGVVAVIDARSSI 319 (965)
T ss_dssp SEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSC
T ss_pred eEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCcc
Confidence 5899999999999999999999999999998754
No 491
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=63.85 E-value=2.1 Score=47.24 Aligned_cols=59 Identities=17% Similarity=0.137 Sum_probs=38.2
Q ss_pred hhhhchHHHhhCCCeEEecCcEEEEEEccCCCCcceEEEEEEEEeeCCceeEEEEeccEEEEeccCCCCHHH
Q 003990 446 TSETWLVDLVNSGNSAILPGCEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNL 517 (781)
Q Consensus 446 ~~~~~L~~a~~~gn~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~~g~g~~~~i~Ak~VVLAaGai~Tp~L 517 (781)
....+...+.++| ++|+++++|++|..+++ ++..|.+ + + . ++.|+.||+|+++....+|
T Consensus 236 l~~~l~~~l~~~g-~~i~~~~~V~~i~~~~~----~~~~v~~---~-~--~--~~~ad~vv~a~p~~~~~~l 294 (477)
T 3nks_A 236 LPQALETHLTSRG-VSVLRGQPVCGLSLQAE----GRWKVSL---R-D--S--SLEADHVISAIPASVLSEL 294 (477)
T ss_dssp HHHHHHHHHHHTT-CEEECSCCCCEEEECGG----GCEEEEC---S-S--C--EEEESEEEECSCHHHHHHH
T ss_pred HHHHHHHHHHhcC-CEEEeCCEEEEEEEcCC----ceEEEEE---C-C--e--EEEcCEEEECCCHHHHHHh
Confidence 3334444444566 99999999999987654 3233422 1 1 1 5889999999986444333
No 492
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=63.81 E-value=6 Score=40.64 Aligned_cols=32 Identities=22% Similarity=0.364 Sum_probs=29.4
Q ss_pred cEEEECCCchHHHHHHHHHhCCC---eEEEEcCCC
Q 003990 273 DAVVVGSGSGGGLIAGVLAKAGY---KVLVLEKGS 304 (781)
Q Consensus 273 DVIVVGsG~~G~vaA~~LA~~G~---kVlVLEkG~ 304 (781)
-+.|||+|..|...|..|+++|+ +|.+.++..
T Consensus 5 ~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 5 NITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred EEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 48999999999999999999998 899999864
No 493
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=63.74 E-value=5.5 Score=40.20 Aligned_cols=31 Identities=19% Similarity=0.113 Sum_probs=27.4
Q ss_pred EEEECC---CchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 274 AVVVGS---GSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 274 VIVVGs---G~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
++|.|+ |..|..+|.+|++.|++|+++.+..
T Consensus 12 vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 45 (265)
T 1qsg_A 12 ILVTGVASKLSIAYGIAQAMHREGAELAFTYQND 45 (265)
T ss_dssp EEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST
T ss_pred EEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH
Confidence 788887 5889999999999999999998753
No 494
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=63.62 E-value=7 Score=40.39 Aligned_cols=31 Identities=19% Similarity=0.265 Sum_probs=28.6
Q ss_pred EEEECC-CchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 274 AVVVGS-GSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 274 VIVVGs-G~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
|+|+|+ |..|..++..|.++|++|.++.|..
T Consensus 14 ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 14 ILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp EEEETTTSTTHHHHHHHHHHTTCCEEEEECTT
T ss_pred EEEECCCchHHHHHHHHHHHCCCcEEEEECCC
Confidence 899995 9999999999999999999998864
No 495
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=63.47 E-value=6.3 Score=40.40 Aligned_cols=31 Identities=23% Similarity=0.356 Sum_probs=28.5
Q ss_pred EEEECC-CchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 274 AVVVGS-GSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 274 VIVVGs-G~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
|+|.|| |..|..++.+|.++|++|.+|-|.+
T Consensus 3 ILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 3 VLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 789997 9999999999999999999998754
No 496
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=63.35 E-value=6.3 Score=39.74 Aligned_cols=31 Identities=26% Similarity=0.224 Sum_probs=26.4
Q ss_pred EEEECCC---chHHHHHHHHHhCCCeEEEEcCCC
Q 003990 274 AVVVGSG---SGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 274 VIVVGsG---~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
+||-|++ ..|..+|..|+++|.+|++..+..
T Consensus 9 alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~ 42 (256)
T 4fs3_A 9 YVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKE 42 (256)
T ss_dssp EEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSG
T ss_pred EEEECCCCCchHHHHHHHHHHHCCCEEEEEECCH
Confidence 6788853 578999999999999999998753
No 497
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=63.33 E-value=4.3 Score=46.76 Aligned_cols=34 Identities=21% Similarity=0.358 Sum_probs=30.1
Q ss_pred cccEEEECCCchHHHHHHHHHhCCC-eEEEEcCCC
Q 003990 271 KCDAVVVGSGSGGGLIAGVLAKAGY-KVLVLEKGS 304 (781)
Q Consensus 271 ~~DVIVVGsG~~G~vaA~~LA~~G~-kVlVLEkG~ 304 (781)
..-|+|||+|..|+.+|..|+..|. ++.|+|...
T Consensus 17 ~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~ 51 (640)
T 1y8q_B 17 GGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDT 51 (640)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCB
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCE
Confidence 3569999999999999999999996 899999764
No 498
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=63.20 E-value=5.5 Score=41.07 Aligned_cols=31 Identities=13% Similarity=0.182 Sum_probs=26.7
Q ss_pred EEEECC-CchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 274 AVVVGS-GSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 274 VIVVGs-G~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
|+|.|+ |..|..++.+|+++|++|+++.+..
T Consensus 5 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (315)
T 2ydy_A 5 VLVTGATGLLGRAVHKEFQQNNWHAVGCGFRR 36 (315)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCEEEEEC---
T ss_pred EEEECCCcHHHHHHHHHHHhCCCeEEEEccCC
Confidence 899997 9999999999999999999998743
No 499
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=63.06 E-value=5.8 Score=43.84 Aligned_cols=52 Identities=12% Similarity=0.075 Sum_probs=36.4
Q ss_pred CeEEecCcEEEEEEccCCCCcceEEEEEEEEee---C--------CceeEEEEeccEEEEeccCCCCH
Q 003990 459 NSAILPGCEAIEVLHKKRRDRNVATGVAFEFQY---M--------GAKDICVVESKVTIVACGALSTP 515 (781)
Q Consensus 459 n~~i~~~~~V~~I~~~~gg~~~ra~GV~~~~~~---~--------g~g~~~~i~Ak~VVLAaGai~Tp 515 (781)
+++|++++.+.+|..+ + ++.+|.+.... . .+++..++.++.||+|.|--.++
T Consensus 266 gv~i~~~~~~~~i~~~-~----~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~ 328 (456)
T 1lqt_A 266 RMVFRFLTSPIEIKGK-R----KVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP 328 (456)
T ss_dssp EEEEECSEEEEEEECS-S----SCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCC
T ss_pred eEEEEeCCCCeEEecC-C----cEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCC
Confidence 3999999999999754 2 56667665310 0 12344678999999999975554
No 500
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=62.82 E-value=5.1 Score=40.39 Aligned_cols=31 Identities=35% Similarity=0.337 Sum_probs=27.5
Q ss_pred EEEECC---CchHHHHHHHHHhCCCeEEEEcCCC
Q 003990 274 AVVVGS---GSGGGLIAGVLAKAGYKVLVLEKGS 304 (781)
Q Consensus 274 VIVVGs---G~~G~vaA~~LA~~G~kVlVLEkG~ 304 (781)
++|.|+ |..|..+|.+|+++|.+|+++.+..
T Consensus 11 vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 44 (261)
T 2wyu_A 11 ALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE 44 (261)
T ss_dssp EEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCG
T ss_pred EEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCH
Confidence 899997 5889999999999999999998753
Done!