Query 003992
Match_columns 781
No_of_seqs 418 out of 3707
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 10:42:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003992.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003992hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fro_A GLGA glycogen synthase; 100.0 1.9E-37 6.5E-42 340.3 30.5 375 308-702 1-434 (439)
2 3okp_A GDP-mannose-dependent a 100.0 3.1E-37 1.1E-41 334.4 24.2 352 308-702 3-383 (394)
3 3c48_A Predicted glycosyltrans 100.0 2.3E-36 8E-41 334.1 27.2 374 298-702 9-429 (438)
4 2jjm_A Glycosyl transferase, g 100.0 7.1E-35 2.4E-39 318.7 26.5 355 309-701 13-388 (394)
5 2r60_A Glycosyl transferase, g 100.0 4.5E-35 1.5E-39 331.3 24.3 370 309-702 7-463 (499)
6 2x6q_A Trehalose-synthase TRET 100.0 1.4E-34 4.7E-39 318.7 24.2 350 307-699 38-415 (416)
7 2qzs_A Glycogen synthase; glyc 100.0 1.8E-34 6.2E-39 324.4 24.4 373 310-700 1-478 (485)
8 2gek_A Phosphatidylinositol ma 100.0 9.5E-35 3.2E-39 316.6 20.0 353 306-703 17-388 (406)
9 1rzu_A Glycogen synthase 1; gl 100.0 2E-34 6.9E-39 324.0 23.0 376 310-702 1-479 (485)
10 3oy2_A Glycosyltransferase B73 100.0 3.2E-34 1.1E-38 315.1 16.7 335 310-702 1-394 (413)
11 2iw1_A Lipopolysaccharide core 100.0 2.1E-34 7.3E-39 310.4 13.6 342 310-694 1-369 (374)
12 2iuy_A Avigt4, glycosyltransfe 100.0 1.1E-32 3.6E-37 295.8 20.1 303 309-702 3-339 (342)
13 3vue_A GBSS-I, granule-bound s 100.0 6.9E-32 2.4E-36 311.4 24.0 212 484-699 241-512 (536)
14 3s28_A Sucrose synthase 1; gly 100.0 2.8E-31 9.5E-36 318.5 27.5 271 419-694 406-767 (816)
15 2x0d_A WSAF; GT4 family, trans 100.0 5.2E-30 1.8E-34 286.4 11.6 334 306-694 43-407 (413)
16 2hy7_A Glucuronosyltransferase 100.0 3.7E-28 1.3E-32 270.1 18.9 236 420-699 124-380 (406)
17 2vsy_A XCC0866; transferase, g 99.9 1.2E-27 4.2E-32 274.4 18.9 330 306-701 202-562 (568)
18 1f0k_A MURG, UDP-N-acetylgluco 99.9 5.8E-27 2E-31 252.6 18.8 249 410-694 86-355 (364)
19 3beo_A UDP-N-acetylglucosamine 99.9 3.1E-26 1.1E-30 247.5 14.6 266 410-694 85-374 (375)
20 1vgv_A UDP-N-acetylglucosamine 99.9 9.1E-26 3.1E-30 245.0 7.3 273 410-700 76-378 (384)
21 2bfw_A GLGA glycogen synthase; 99.9 1.9E-24 6.6E-29 214.0 12.4 168 505-674 2-188 (200)
22 3qhp_A Type 1 capsular polysac 99.9 2.2E-24 7.4E-29 207.7 11.3 155 532-688 2-166 (166)
23 1uqt_A Alpha, alpha-trehalose- 99.9 1.8E-24 6.3E-29 246.5 12.6 191 501-694 220-452 (482)
24 1v4v_A UDP-N-acetylglucosamine 99.9 3.5E-24 1.2E-28 232.5 9.4 270 410-700 81-366 (376)
25 3nb0_A Glycogen [starch] synth 99.9 1.2E-22 4.1E-27 236.1 18.1 274 417-699 178-634 (725)
26 2xci_A KDO-transferase, 3-deox 99.9 1.1E-20 3.8E-25 207.9 21.7 229 410-674 101-352 (374)
27 3t5t_A Putative glycosyltransf 99.9 2.2E-20 7.5E-25 212.6 22.2 263 420-694 149-471 (496)
28 2f9f_A First mannosyl transfer 99.8 3.3E-21 1.1E-25 189.1 10.1 141 526-670 17-165 (177)
29 3otg_A CALG1; calicheamicin, T 99.7 2.1E-17 7.3E-22 181.0 18.8 258 410-694 120-408 (412)
30 3dzc_A UDP-N-acetylglucosamine 99.7 9.3E-18 3.2E-22 186.2 12.1 269 409-693 100-394 (396)
31 3s2u_A UDP-N-acetylglucosamine 99.6 1.1E-14 3.6E-19 159.7 23.5 255 410-694 82-352 (365)
32 3tsa_A SPNG, NDP-rhamnosyltran 99.6 5.8E-15 2E-19 161.0 20.4 259 410-694 104-388 (391)
33 3ot5_A UDP-N-acetylglucosamine 99.6 4.4E-16 1.5E-20 173.3 9.5 268 409-694 103-389 (403)
34 2iyf_A OLED, oleandomycin glyc 99.6 3.4E-14 1.2E-18 157.0 24.3 261 410-694 94-399 (430)
35 3rhz_A GTF3, nucleotide sugar 99.6 6.6E-16 2.3E-20 168.5 8.9 233 419-689 73-329 (339)
36 4fzr_A SSFS6; structural genom 99.6 1.6E-14 5.4E-19 158.3 17.9 249 411-690 114-396 (398)
37 3oti_A CALG3; calicheamicin, T 99.5 5.8E-14 2E-18 154.0 13.5 148 532-694 233-397 (398)
38 3ia7_A CALG4; glycosysltransfe 99.5 2.7E-12 9.1E-17 139.6 23.3 149 532-694 232-398 (402)
39 3rsc_A CALG2; TDP, enediyne, s 99.4 8.8E-12 3E-16 136.9 24.1 149 532-694 248-413 (415)
40 2p6p_A Glycosyl transferase; X 99.4 1E-11 3.4E-16 135.2 21.8 231 410-674 97-354 (384)
41 4hwg_A UDP-N-acetylglucosamine 99.3 5.8E-12 2E-16 139.5 14.5 243 409-674 83-349 (385)
42 2yjn_A ERYCIII, glycosyltransf 99.3 1.6E-10 5.5E-15 128.7 22.0 148 533-694 269-435 (441)
43 2iya_A OLEI, oleandomycin glyc 99.1 1.2E-08 4.2E-13 112.5 25.3 149 532-692 256-419 (424)
44 3h4t_A Glycosyltransferase GTF 99.0 4.3E-09 1.5E-13 116.2 18.5 147 532-694 222-382 (404)
45 4amg_A Snogd; transferase, pol 99.0 2.4E-10 8.3E-15 124.4 6.7 130 534-674 240-375 (400)
46 3q3e_A HMW1C-like glycosyltran 98.9 1.9E-09 6.6E-14 125.1 8.8 252 410-694 339-621 (631)
47 1iir_A Glycosyltransferase GTF 98.9 9.1E-08 3.1E-12 105.6 20.2 150 532-700 239-400 (415)
48 2o6l_A UDP-glucuronosyltransfe 98.8 7.3E-09 2.5E-13 100.2 6.9 121 532-669 22-156 (170)
49 1rrv_A Glycosyltransferase GTF 98.7 4.5E-07 1.5E-11 100.0 21.3 126 532-674 238-376 (416)
50 2c4m_A Glycogen phosphorylase; 98.0 6E-05 2.1E-09 89.5 15.9 168 529-700 513-721 (796)
51 4gyw_A UDP-N-acetylglucosamine 97.9 3.9E-05 1.3E-09 91.5 12.6 175 520-699 511-706 (723)
52 3hbm_A UDP-sugar hydrolase; PS 97.9 0.00018 6.2E-09 76.3 15.6 245 310-635 1-251 (282)
53 1l5w_A Maltodextrin phosphoryl 97.7 5.7E-05 2E-09 89.7 9.0 171 525-699 517-731 (796)
54 2gj4_A Glycogen phosphorylase, 97.7 6E-05 2E-09 89.9 8.8 167 529-699 547-755 (824)
55 2vch_A Hydroquinone glucosyltr 96.7 0.81 2.8E-05 51.5 29.0 75 589-668 341-430 (480)
56 1psw_A ADP-heptose LPS heptosy 95.9 0.02 6.8E-07 60.9 9.3 108 522-636 170-288 (348)
57 2jzc_A UDP-N-acetylglucosamine 95.4 0.026 9E-07 57.7 7.5 48 586-637 113-161 (224)
58 2c1x_A UDP-glucose flavonoid 3 95.0 0.055 1.9E-06 60.7 9.3 76 588-668 326-413 (456)
59 2gt1_A Lipopolysaccharide hept 94.7 0.21 7E-06 52.7 12.2 128 532-667 179-322 (326)
60 3tov_A Glycosyl transferase fa 94.5 0.13 4.3E-06 55.6 10.3 108 525-639 178-291 (349)
61 2pq6_A UDP-glucuronosyl/UDP-gl 94.3 0.28 9.5E-06 55.2 12.9 77 588-669 354-441 (482)
62 3hbf_A Flavonoid 3-O-glucosylt 93.0 0.58 2E-05 52.6 12.3 76 588-668 328-415 (454)
63 2acv_A Triterpene UDP-glucosyl 92.3 0.47 1.6E-05 53.1 10.5 73 589-666 334-424 (463)
64 1ygp_A Yeast glycogen phosphor 68.1 18 0.00061 43.6 10.3 122 530-651 598-759 (879)
65 3lrt_A Ribose-phosphate pyroph 52.7 33 0.0011 36.0 8.1 51 309-361 45-96 (286)
66 4fb5_A Probable oxidoreductase 50.4 36 0.0012 36.0 8.2 96 534-634 27-124 (393)
67 3uuw_A Putative oxidoreductase 48.6 43 0.0015 34.6 8.3 68 561-634 29-96 (308)
68 4h3v_A Oxidoreductase domain p 47.0 51 0.0018 34.7 8.8 96 534-634 8-105 (390)
69 3gt7_A Sensor protein; structu 45.3 1.6E+02 0.0055 26.1 10.9 108 563-670 7-130 (154)
70 4had_A Probable oxidoreductase 43.0 91 0.0031 32.6 9.9 76 550-634 39-116 (350)
71 3l7i_A Teichoic acid biosynthe 40.7 70 0.0024 37.5 9.3 169 484-667 478-683 (729)
72 2l2q_A PTS system, cellobiose- 39.8 58 0.002 28.7 6.5 90 566-667 8-105 (109)
73 1p9l_A Dihydrodipicolinate red 39.0 79 0.0027 32.2 8.2 73 565-637 2-78 (245)
74 3s5j_B Ribose-phosphate pyroph 37.7 1.8E+02 0.0061 31.0 11.0 86 272-361 10-101 (326)
75 2pln_A HP1043, response regula 37.5 1.5E+02 0.0052 25.4 9.1 102 563-667 18-133 (137)
76 3mz0_A Inositol 2-dehydrogenas 37.5 1.1E+02 0.0036 32.1 9.3 71 560-634 24-96 (344)
77 3lkv_A Uncharacterized conserv 35.8 2.5E+02 0.0086 28.5 11.8 88 546-636 125-228 (302)
78 4f3y_A DHPR, dihydrodipicolina 35.1 52 0.0018 34.1 6.2 42 596-637 65-106 (272)
79 1fy2_A Aspartyl dipeptidase; s 34.6 81 0.0028 31.5 7.4 89 547-638 17-123 (229)
80 3rot_A ABC sugar transporter, 34.6 1.9E+02 0.0065 28.9 10.4 65 603-667 60-126 (297)
81 2zay_A Response regulator rece 34.2 1.6E+02 0.0053 25.7 8.7 106 563-668 8-129 (147)
82 3dah_A Ribose-phosphate pyroph 33.7 1.1E+02 0.0039 32.4 8.7 85 273-361 15-105 (319)
83 3ezy_A Dehydrogenase; structur 33.1 1.4E+02 0.0047 31.2 9.3 70 561-635 24-95 (344)
84 3db2_A Putative NADPH-dependen 32.5 1.3E+02 0.0044 31.6 9.0 69 561-635 27-97 (354)
85 2f62_A Nucleoside 2-deoxyribos 32.4 1.1E+02 0.0037 29.2 7.5 36 600-635 63-105 (161)
86 3rc1_A Sugar 3-ketoreductase; 31.8 1.3E+02 0.0044 31.7 8.8 90 533-634 28-119 (350)
87 3u3x_A Oxidoreductase; structu 31.7 2.3E+02 0.008 29.9 10.9 90 533-634 27-118 (361)
88 4hkt_A Inositol 2-dehydrogenas 31.5 1.2E+02 0.0041 31.4 8.5 67 562-635 26-94 (331)
89 3euw_A MYO-inositol dehydrogen 30.8 1.2E+02 0.0042 31.5 8.5 69 561-635 26-96 (344)
90 3e9m_A Oxidoreductase, GFO/IDH 30.8 2.5E+02 0.0086 29.0 10.9 77 550-635 20-98 (330)
91 3l6u_A ABC-type sugar transpor 30.0 4E+02 0.014 26.1 12.5 61 604-666 64-125 (293)
92 3nva_A CTP synthase; rossman f 29.7 2.7E+02 0.0093 31.7 11.3 205 418-634 133-385 (535)
93 2ji4_A Phosphoribosyl pyrophos 29.6 1.7E+02 0.0059 31.7 9.5 87 271-361 35-130 (379)
94 3moi_A Probable dehydrogenase; 29.3 1.8E+02 0.006 31.1 9.5 68 562-635 26-95 (387)
95 2o4c_A Erythronate-4-phosphate 29.0 2.1E+02 0.0072 31.1 10.0 74 562-635 115-207 (380)
96 3q2i_A Dehydrogenase; rossmann 28.5 1.8E+02 0.0063 30.4 9.4 91 533-635 14-106 (354)
97 4ekn_B Aspartate carbamoyltran 28.3 1E+02 0.0035 32.5 7.2 130 479-617 92-232 (306)
98 3uug_A Multiple sugar-binding 27.7 2E+02 0.007 29.0 9.3 63 603-666 58-121 (330)
99 3jte_A Response regulator rece 27.5 2.9E+02 0.01 23.7 10.4 103 564-666 4-122 (143)
100 3itj_A Thioredoxin reductase 1 26.5 32 0.0011 35.1 2.8 52 289-350 2-53 (338)
101 3ec7_A Putative dehydrogenase; 25.9 1.5E+02 0.0051 31.3 8.1 92 533-634 24-117 (357)
102 3cea_A MYO-inositol 2-dehydrog 25.4 2.8E+02 0.0096 28.6 10.1 91 533-634 9-101 (346)
103 3kb6_A D-lactate dehydrogenase 24.8 1.6E+02 0.0055 31.2 8.0 38 597-634 187-229 (334)
104 3kht_A Response regulator; PSI 24.6 3.4E+02 0.012 23.4 9.3 104 563-666 5-127 (144)
105 3g1w_A Sugar ABC transporter; 24.5 3.6E+02 0.012 26.7 10.4 63 603-667 60-123 (305)
106 3m9w_A D-xylose-binding peripl 24.1 3.1E+02 0.011 27.4 9.9 60 604-665 58-118 (313)
107 3l49_A ABC sugar (ribose) tran 24.1 1.9E+02 0.0063 28.6 8.0 60 603-666 60-120 (291)
108 1zh8_A Oxidoreductase; TM0312, 24.0 2.6E+02 0.0089 29.1 9.5 92 532-634 18-112 (340)
109 1ydw_A AX110P-like protein; st 24.0 2.2E+02 0.0074 29.9 8.9 91 533-634 7-101 (362)
110 2ho3_A Oxidoreductase, GFO/IDH 23.7 2.1E+02 0.0073 29.4 8.7 69 562-635 24-93 (325)
111 3h75_A Periplasmic sugar-bindi 23.5 1.5E+02 0.005 30.6 7.4 34 604-637 62-95 (350)
112 1e2b_A Enzyme IIB-cellobiose; 22.8 44 0.0015 29.6 2.6 91 565-666 6-101 (106)
113 3hzh_A Chemotaxis response reg 22.6 3.5E+02 0.012 23.9 9.0 18 649-666 139-156 (157)
114 2glx_A 1,5-anhydro-D-fructose 22.3 2.6E+02 0.0088 28.7 8.9 68 562-634 23-92 (332)
115 1u9y_A RPPK;, ribose-phosphate 22.3 64 0.0022 33.6 4.2 66 291-361 31-97 (284)
116 1tlt_A Putative oxidoreductase 22.0 1.5E+02 0.005 30.6 7.0 68 561-634 28-95 (319)
117 4fyk_A Deoxyribonucleoside 5'- 22.0 89 0.003 29.7 4.7 67 600-667 64-142 (152)
118 3dty_A Oxidoreductase, GFO/IDH 21.8 2.3E+02 0.0077 30.4 8.6 70 562-634 38-115 (398)
119 1qkk_A DCTD, C4-dicarboxylate 21.4 4E+02 0.014 23.2 9.1 98 564-667 4-121 (155)
120 2i6u_A Otcase, ornithine carba 21.3 3.2E+02 0.011 28.7 9.4 123 479-613 90-226 (307)
121 3o1i_D Periplasmic protein TOR 21.3 2.6E+02 0.009 27.6 8.6 33 604-637 63-96 (304)
122 2czc_A Glyceraldehyde-3-phosph 21.3 1.2E+02 0.004 32.1 6.1 81 549-634 16-109 (334)
123 3ohs_X Trans-1,2-dihydrobenzen 21.2 2.8E+02 0.0095 28.7 9.0 68 563-635 28-97 (334)
124 2dc1_A L-aspartate dehydrogena 21.2 1.3E+02 0.0044 29.8 6.0 39 597-635 42-81 (236)
125 3ijp_A DHPR, dihydrodipicolina 21.2 1.1E+02 0.0039 31.9 5.8 42 596-637 80-121 (288)
126 4hb9_A Similarities with proba 21.2 70 0.0024 33.5 4.3 30 309-348 1-30 (412)
127 2m1z_A LMO0427 protein; homolo 21.2 2.5E+02 0.0086 25.0 7.2 76 576-666 23-104 (106)
128 3cg4_A Response regulator rece 21.1 3.9E+02 0.013 22.8 10.1 104 563-666 7-126 (142)
129 3v5n_A Oxidoreductase; structu 21.0 2.5E+02 0.0087 30.3 8.9 70 562-635 63-141 (417)
130 3o74_A Fructose transport syst 20.9 3.4E+02 0.011 26.2 9.1 61 604-667 58-118 (272)
131 3sho_A Transcriptional regulat 20.7 3.9E+02 0.013 24.7 9.2 71 565-635 41-121 (187)
132 2ixa_A Alpha-N-acetylgalactosa 20.6 2.8E+02 0.0094 30.2 9.1 94 533-634 21-121 (444)
133 3grc_A Sensor protein, kinase; 20.6 4E+02 0.014 22.7 10.5 106 563-668 6-128 (140)
134 3cnb_A DNA-binding response re 20.5 3.9E+02 0.013 22.6 10.5 107 563-669 8-132 (143)
135 3ksm_A ABC-type sugar transpor 20.3 5.8E+02 0.02 24.5 10.8 61 605-667 60-121 (276)
136 1xea_A Oxidoreductase, GFO/IDH 20.2 1.5E+02 0.0052 30.6 6.6 67 562-634 26-93 (323)
137 3oet_A Erythronate-4-phosphate 20.1 2.8E+02 0.0095 30.1 8.8 76 562-637 118-212 (381)
No 1
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=100.00 E-value=1.9e-37 Score=340.30 Aligned_cols=375 Identities=13% Similarity=0.114 Sum_probs=260.3
Q ss_pred CCCEEEEEeCccCC-CcCcccccHHHHHHHHHHcCCCEEEEEeccCCCCCCcccccccc-ccCCchhhHHHHHHHHHhhC
Q 003992 308 KKRNVAIVTTASLP-WMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVT-FCSPEEQENYMRNWLEERVG 385 (781)
Q Consensus 308 ~~~rIaI~TtaflP-~~~G~av~~l~rA~~Lak~G~~~VtlVvP~l~~~dq~~v~p~i~-f~~p~~qe~yir~~l~~rig 385 (781)
++|||+++|..|+| ..+|++......|.+|++.|| +|++++|.......... ..+. +........ . ..
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~-~V~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~---~~ 70 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGH-EVLVFTPSHGRFQGEEI-GKIRVFGEEVQVKV-----S---YE 70 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTC-EEEEEEECTTCSCCEEE-EEEEETTEEEEEEE-----E---EE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCC-eEEEEecCCCCchhhhh-ccccccCcccceee-----e---ec
Confidence 47999999999998 778888777888999999996 99999986443221100 0000 000000000 0 00
Q ss_pred CcccceeeccCCc-------cc---cc-cccc----CchHhHHhhc--ccCCCcEEEECCCchhHHHHHHHHHHhhcC-C
Q 003992 386 FKADFKISFYPGK-------FS---KE-RRSI----IPAGDTSQFI--PSKDADIAILEEPEHLNWYHHGKRWTDKFN-H 447 (781)
Q Consensus 386 ~~~~~~i~~yP~~-------~~---~~-~~si----l~v~~L~k~I--~~~kPDVIhl~~P~~l~~~~~g~~~akk~~-p 447 (781)
...++.+..++.. +. .. ...+ ..+..+.+.+ +..+|||||++.+.. +... ..+++..+ |
T Consensus 71 ~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~-~~~~--~~~~~~~~~~ 147 (439)
T 3fro_A 71 ERGNLRIYRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHT-VFAG--ALIKKYFKIP 147 (439)
T ss_dssp EETTEEEEEEESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGG-HHHH--HHHHHHHCCC
T ss_pred cCCCceEEEecchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhh-hhhH--HHHhhccCCC
Confidence 0011111111110 00 00 0000 0011122222 256999999997543 2222 33445556 9
Q ss_pred EEEEEECCcHH----HHHHhhcchhH---HHHHHHHHHHHHHhcCCEEEEcChhhhh--------cCCCcEEeeCCCCCC
Q 003992 448 VVGVVHTNYLE----YIKREKNGALQ---AFFVKHINNWVTRAYCDKVLRLSAATQD--------LPKSVICNVHGVNPK 512 (781)
Q Consensus 448 vV~ivHt~y~~----y~~~~~~~~~~---~~l~k~l~r~l~r~~aD~VI~vS~~~k~--------l~~kivvi~nGVD~~ 512 (781)
+|.++|+.+.. ....... .. ......+.+...+ .+|.|+++|+..++ ...++.+++||||.+
T Consensus 148 ~v~~~h~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ngvd~~ 224 (439)
T 3fro_A 148 AVFTIHRLNKSKLPAFYFHEAG--LSELAPYPDIDPEHTGGY-IADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCS 224 (439)
T ss_dssp EEEEESCCCCCCEEHHHHHHTT--CGGGCCSSEECHHHHHHH-HCSEEEESCHHHHHHTHHHHGGGTTSEEECCCCCCTT
T ss_pred EEEEecccccccCchHHhCccc--cccccccceeeHhhhhhh-hccEEEecCHHHHHHHhhhhhhcCCceeecCCCCCch
Confidence 99999987532 1100000 00 0000123344444 69999999997654 235789999999998
Q ss_pred CCCCC--------cchhhHhhhCcCCCCcEEEEEeecc-CccCHHHHHHHHHHhhccC--CCcEEEEEeCCCCH--HHHH
Q 003992 513 FLQIG--------EKVATDREQGQQAFSKGAYFLGKMV-WAKGYRELIDLLAKHKNDL--DGFKLDVFGNGEDA--YEVQ 579 (781)
Q Consensus 513 ~f~p~--------~~~~~r~~~Gi~~~~~~ILfVGRL~-~~KGid~LLeA~~~L~~~~--p~i~LvIVG~Gp~~--~~L~ 579 (781)
.|.+. .+...+++++++++ ++++|+|++. +.||++.+++|+..+.++. ++++|+|+|+|+.. +.++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~ 303 (439)
T 3fro_A 225 FWNESYLTGSRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWAR 303 (439)
T ss_dssp TSCGGGSCSCHHHHHHHHHHHHTCCSC-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHH
T ss_pred hcCcccccchhhhhHHHHHHHcCCCCC-cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHH
Confidence 88765 23445677888776 9999999999 9999999999999998876 89999999999987 8999
Q ss_pred HHHHhcCCc-EEEcCCCCCHH--HHHhcccEEEEccCCCCChHHHHHHHHhCCcEEEeCCCCcceeecCCcccc--CCCH
Q 003992 580 SAAKRLDLN-LNFQKGRDHAD--DSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSNEFFRSFPNCLT--YKTS 654 (781)
Q Consensus 580 ~~a~~lgL~-V~FlG~v~~~e--~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~g~L~~~~ngv~--~~D~ 654 (781)
+++++++ + +.|+|++++.+ .+|+.||++|+||.+|+||++++||||||+|||+|+.|+...++...+|+. .+|+
T Consensus 304 ~~~~~~~-~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~~g~~~~~~d~ 382 (439)
T 3fro_A 304 SLEEKHG-NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNETGILVKAGDP 382 (439)
T ss_dssp HHHHHCT-TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTTTCEEECTTCH
T ss_pred HHHhhcC-CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEcCceEEeCCCCH
Confidence 9999988 6 88999888766 899999999999999999999999999999999999998876654336643 3799
Q ss_pred HHHHHHHHHHHh-CCCCCCCh-----HHHHcCCHHHHHHHHHHHhhhccccccC
Q 003992 655 EDFVARVKEALA-NDPQPLTP-----EQRYNLSWEAATQRFIEYSELNRILNNN 702 (781)
Q Consensus 655 eeLa~aI~~LL~-d~~~r~~m-----~~~~~fSWe~iaerll~~Ye~~~vl~~~ 702 (781)
++++++|.++++ +++.+.+| +..++|||+.++++++++|+ +++++.
T Consensus 383 ~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~--~~~~~~ 434 (439)
T 3fro_A 383 GELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYT--GSIDRA 434 (439)
T ss_dssp HHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHH--TCSCCB
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHH--HHHHhh
Confidence 999999999999 88888877 23367999999999999999 777543
No 2
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=100.00 E-value=3.1e-37 Score=334.37 Aligned_cols=352 Identities=15% Similarity=0.120 Sum_probs=259.9
Q ss_pred CCCEEEEEeCccCCCcCcccccHHHHHHHHHHcCCCEEEEEeccCCCCCCccccccccccCCchhhHHHHHHHHHhhCCc
Q 003992 308 KKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFK 387 (781)
Q Consensus 308 ~~~rIaI~TtaflP~~~G~av~~l~rA~~Lak~G~~~VtlVvP~l~~~dq~~v~p~i~f~~p~~qe~yir~~l~~rig~~ 387 (781)
++|||+|+|..|+|..+|++......+.+| .| ++|+++++..... .... .....+
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g-~~v~v~~~~~~~~---------------~~~~-----~~~~~~-- 57 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DP-ESIVVFASTQNAE---------------EAHA-----YDKTLD-- 57 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CG-GGEEEEEECSSHH---------------HHHH-----HHTTCS--
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cC-CeEEEEECCCCcc---------------chhh-----hccccc--
Confidence 479999999999999999887777777777 46 5999998642100 0000 001111
Q ss_pred ccceeeccCCcccccccccCchHhHHhhcccCCCcEEEECCCchhHHHHHHHHHHhhcC-C-EEEEEECCcHHHHHHhhc
Q 003992 388 ADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-H-VVGVVHTNYLEYIKREKN 465 (781)
Q Consensus 388 ~~~~i~~yP~~~~~~~~sil~v~~L~k~I~~~kPDVIhl~~P~~l~~~~~g~~~akk~~-p-vV~ivHt~y~~y~~~~~~ 465 (781)
+.+..++... ..........+.+++++.+||+||++.+....++. .++++.+ | +|.++|+....+. .
T Consensus 58 --~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~---~~~~~~~~~~~i~~~h~~~~~~~----~ 126 (394)
T 3okp_A 58 --YEVIRWPRSV--MLPTPTTAHAMAEIIREREIDNVWFGAAAPLALMA---GTAKQAGASKVIASTHGHEVGWS----M 126 (394)
T ss_dssp --SEEEEESSSS--CCSCHHHHHHHHHHHHHTTCSEEEESSCTTGGGGH---HHHHHTTCSEEEEECCSTHHHHT----T
T ss_pred --eEEEEccccc--cccchhhHHHHHHHHHhcCCCEEEECCcchHHHHH---HHHHhcCCCcEEEEeccchhhhh----h
Confidence 2222222111 01111223568888999999999999876665544 3345555 5 7888887643221 1
Q ss_pred chhHHHHHHHHHHHHHHhcCCEEEEcChhhhhc-------CCCcEEeeCCCCCCCCCCC---cchhhHhhhCcCCCCcEE
Q 003992 466 GALQAFFVKHINNWVTRAYCDKVLRLSAATQDL-------PKSVICNVHGVNPKFLQIG---EKVATDREQGQQAFSKGA 535 (781)
Q Consensus 466 ~~~~~~l~k~l~r~l~r~~aD~VI~vS~~~k~l-------~~kivvi~nGVD~~~f~p~---~~~~~r~~~Gi~~~~~~I 535 (781)
....+.+.+++.+ ++|.|+++|+..++. ..++.+++||+|...+.+. .+...+..++++++.+.+
T Consensus 127 ----~~~~~~~~~~~~~-~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 201 (394)
T 3okp_A 127 ----LPGSRQSLRKIGT-EVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTTPVI 201 (394)
T ss_dssp ----SHHHHHHHHHHHH-HCSEEEESCHHHHHHHHHHHCSSSEEEECCCCBCTTTSCCCCHHHHHHHHHHTTCCTTCCEE
T ss_pred ----cchhhHHHHHHHH-hCCEEEEcCHHHHHHHHHhcCCCCCeEEecCCcCHHHcCCCCchhhHHHHHhcCCCcCceEE
Confidence 1122333344444 699999999977652 2367889999998877652 234456778888778999
Q ss_pred EEEeeccCccCHHHHHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHH--HHHhcccEEEEccC
Q 003992 536 YFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHAD--DSLHGYKVFINPSI 613 (781)
Q Consensus 536 LfVGRL~~~KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e--~ly~~ADVfVlPS~ 613 (781)
+|+|++.+.||++.+++|+..+.++.++++|+|+|+|+..+.+++++..+.-.|.|+|++++.+ .+|+.||++|+||.
T Consensus 202 ~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~ 281 (394)
T 3okp_A 202 ACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPAR 281 (394)
T ss_dssp EEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCTTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSEEEECCC
T ss_pred EEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCchHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCEEEecCc
Confidence 9999999999999999999999988899999999999999999988843333499999997665 99999999999999
Q ss_pred C-------CCChHHHHHHHHhCCcEEEeCCCCcceeecCCccccC--CCHHHHHHHHHHHHhCCCCCCCh-----H-HHH
Q 003992 614 S-------DVLCTATAEALAMGKFVICADHPSNEFFRSFPNCLTY--KTSEDFVARVKEALANDPQPLTP-----E-QRY 678 (781)
Q Consensus 614 ~-------EgfGlviLEAMA~G~PVVaSd~gg~g~L~~~~ngv~~--~D~eeLa~aI~~LL~d~~~r~~m-----~-~~~ 678 (781)
+ |+||++++||||||+|||+++.++...++...+|+.. +|+++++++|.++++|++.+.+| + ..+
T Consensus 282 ~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~ 361 (394)
T 3okp_A 282 TRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPATGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEA 361 (394)
T ss_dssp CBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCTTTEEECCTTCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhcCCceEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 9 9999999999999999999999988765543366554 69999999999999998877766 2 335
Q ss_pred cCCHHHHHHHHHHHhhhccccccC
Q 003992 679 NLSWEAATQRFIEYSELNRILNNN 702 (781)
Q Consensus 679 ~fSWe~iaerll~~Ye~~~vl~~~ 702 (781)
.|+|+.++++++++|+ +++...
T Consensus 362 ~~s~~~~~~~~~~~~~--~~~r~~ 383 (394)
T 3okp_A 362 EWSWEIMGERLTNILQ--SEPRKL 383 (394)
T ss_dssp HTBHHHHHHHHHHHHH--SCCC--
T ss_pred hCCHHHHHHHHHHHHH--HhccCc
Confidence 6999999999999999 665433
No 3
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=100.00 E-value=2.3e-36 Score=334.13 Aligned_cols=374 Identities=16% Similarity=0.134 Sum_probs=250.3
Q ss_pred ccCCCCCCCCCCCEEEEEeCccCC-------CcCcccccHHHHHHHHHHcCCCEEEEEeccCCCCCCccccccccccCCc
Q 003992 298 TDFGKDDLSDKKRNVAIVTTASLP-------WMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPE 370 (781)
Q Consensus 298 ~~~~~~~~~~~~~rIaI~TtaflP-------~~~G~av~~l~rA~~Lak~G~~~VtlVvP~l~~~dq~~v~p~i~f~~p~ 370 (781)
|+.++.....++|||+|+|..|+| ..+|.+......|.+|.+.|+ +|+++++........ . ...
T Consensus 9 ~~~~~~~~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~-~V~v~~~~~~~~~~~-~---~~~---- 79 (438)
T 3c48_A 9 HHSSGLVPRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGI-EVDIYTRATRPSQGE-I---VRV---- 79 (438)
T ss_dssp ----------CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTC-EEEEEEECCCGGGCS-E---EEE----
T ss_pred ccccCcccCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCC-EEEEEecCCCCCCcc-c---ccc----
Confidence 344556667788999999999999 457777777788999999985 999998742210000 0 000
Q ss_pred hhhHHHHHHHHHhhCCcccceeeccCCcc-----cccccccC-c-hHhHHhh-cccC-CCcEEEECCCchhHHHHHHHHH
Q 003992 371 EQENYMRNWLEERVGFKADFKISFYPGKF-----SKERRSII-P-AGDTSQF-IPSK-DADIAILEEPEHLNWYHHGKRW 441 (781)
Q Consensus 371 ~qe~yir~~l~~rig~~~~~~i~~yP~~~-----~~~~~sil-~-v~~L~k~-I~~~-kPDVIhl~~P~~l~~~~~g~~~ 441 (781)
..++.+..++... .......+ . ...+.+. ++.. +|||||++.+. .+++. ..+
T Consensus 80 ----------------~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~-~~~~~--~~~ 140 (438)
T 3c48_A 80 ----------------AENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWL-SGQVG--WLL 140 (438)
T ss_dssp ----------------ETTEEEEEECCSCSSSCCGGGGGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHH-HHHHH--HHH
T ss_pred ----------------cCCeEEEEecCCCccccchhHHHHHHHHHHHHHHHHHHhccCCCCEEEeCCcc-HHHHH--HHH
Confidence 0001111111000 00000000 0 0122333 4433 49999998632 22222 344
Q ss_pred HhhcC-CEEEEEECCcHHHHHHhhcc-hhHHHHHHHHHHHHHHhcCCEEEEcChhhhh-----c--C-CCcEEeeCCCCC
Q 003992 442 TDKFN-HVVGVVHTNYLEYIKREKNG-ALQAFFVKHINNWVTRAYCDKVLRLSAATQD-----L--P-KSVICNVHGVNP 511 (781)
Q Consensus 442 akk~~-pvV~ivHt~y~~y~~~~~~~-~~~~~l~k~l~r~l~r~~aD~VI~vS~~~k~-----l--~-~kivvi~nGVD~ 511 (781)
++..+ |+|.++|+.+.......... .........+.+++.+ .+|.|+++|+..++ + + .++.+++||+|.
T Consensus 141 ~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ngvd~ 219 (438)
T 3c48_A 141 RDLWRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVD-NADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADV 219 (438)
T ss_dssp HHHHTCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHH-HCSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCT
T ss_pred HHHcCCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHh-cCCEEEEcCHHHHHHHHHHhCCChhheEEecCCccc
Confidence 55556 99999998753211000000 0111222334455555 69999999997655 2 1 357889999998
Q ss_pred CCCCCCcchh---hHhhhCcCCCCcEEEEEeeccCccCHHHHHHHHHHhhccCC--CcEEEEEeC----CCCHHHHHHHH
Q 003992 512 KFLQIGEKVA---TDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLD--GFKLDVFGN----GEDAYEVQSAA 582 (781)
Q Consensus 512 ~~f~p~~~~~---~r~~~Gi~~~~~~ILfVGRL~~~KGid~LLeA~~~L~~~~p--~i~LvIVG~----Gp~~~~L~~~a 582 (781)
..+.+..... .+.+++++++.++++|+|++.+.||++.+++|+..+.++.| +++|+|+|+ |+..+.+++++
T Consensus 220 ~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~~~~~l~~~~ 299 (438)
T 3c48_A 220 ELYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMA 299 (438)
T ss_dssp TTSCCC----CHHHHHHTTCCSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC------CHHHHHH
T ss_pred cccCCcccchhhhhHHhcCCCCCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCcHHHHHHHHH
Confidence 8776643322 56778887788999999999999999999999999988876 899999999 88889999999
Q ss_pred HhcCCc--EEEcCCCCCHH--HHHhcccEEEEccCCCCChHHHHHHHHhCCcEEEeCCCCcceee-cCCcccc--CCCHH
Q 003992 583 KRLDLN--LNFQKGRDHAD--DSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSNEFFR-SFPNCLT--YKTSE 655 (781)
Q Consensus 583 ~~lgL~--V~FlG~v~~~e--~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~g~L~-~~~ngv~--~~D~e 655 (781)
+++++. |.|+|++++.+ .+|+.||++|+||..|+||++++||||||+|||+++.++...++ .+.+|+. .+|++
T Consensus 300 ~~~~l~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~ 379 (438)
T 3c48_A 300 EELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPH 379 (438)
T ss_dssp HHTTCTTTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSCCHH
T ss_pred HHcCCCCcEEEcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCCCChhHHhhCCCcEEECCCCCHH
Confidence 998875 99999997665 99999999999999999999999999999999999999876544 3445543 37999
Q ss_pred HHHHHHHHHHhCCCCCCCh-----HHHHcCCHHHHHHHHHHHhhhccccccC
Q 003992 656 DFVARVKEALANDPQPLTP-----EQRYNLSWEAATQRFIEYSELNRILNNN 702 (781)
Q Consensus 656 eLa~aI~~LL~d~~~r~~m-----~~~~~fSWe~iaerll~~Ye~~~vl~~~ 702 (781)
+++++|.++++|++.+.+| +....|+|+.++++++++|+ +++++.
T Consensus 380 ~la~~i~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~--~~~~~~ 429 (438)
T 3c48_A 380 AWADALATLLDDDETRIRMGEDAVEHARTFSWAATAAQLSSLYN--DAIANE 429 (438)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHTC
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--HHhhhc
Confidence 9999999999998877666 23344999999999999999 888654
No 4
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=100.00 E-value=7.1e-35 Score=318.71 Aligned_cols=355 Identities=14% Similarity=0.106 Sum_probs=248.7
Q ss_pred CCEEEEEeCccCCCcCcccccHHHHHHHHHHcCCCEEEEEeccCCCCCCccccccccccCCchhhHHHHHHHHHhhCCcc
Q 003992 309 KRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKA 388 (781)
Q Consensus 309 ~~rIaI~TtaflP~~~G~av~~l~rA~~Lak~G~~~VtlVvP~l~~~dq~~v~p~i~f~~p~~qe~yir~~l~~rig~~~ 388 (781)
.|+.-|.+..| |..+|++......|.+|++.|+ +|+++++..... .....+++.+. .++
T Consensus 13 ~~~~~~~~~~~-p~~GG~~~~~~~la~~L~~~G~-~V~v~~~~~~~~-~~~~~~~i~~~-----------------~~~- 71 (394)
T 2jjm_A 13 HMKLKIGITCY-PSVGGSGVVGTELGKQLAERGH-EIHFITSGLPFR-LNKVYPNIYFH-----------------EVT- 71 (394)
T ss_dssp --CCEEEEECC-C--CHHHHHHHHHHHHHHHTTC-EEEEECSSCC-----CCCTTEEEE-----------------CCC-
T ss_pred hheeeeehhcC-CCCCCHHHHHHHHHHHHHhCCC-EEEEEeCCCCCc-ccccCCceEEE-----------------ecc-
Confidence 35555665655 5688988888888999999996 999998632110 00000111000 000
Q ss_pred cceeeccCCcccccccccCchHhHHhhcccCCCcEEEECCCchhHHHHHHHHHHhh--cC-CEEEEEECCcHHHHHHhhc
Q 003992 389 DFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDK--FN-HVVGVVHTNYLEYIKREKN 465 (781)
Q Consensus 389 ~~~i~~yP~~~~~~~~sil~v~~L~k~I~~~kPDVIhl~~P~~l~~~~~g~~~akk--~~-pvV~ivHt~y~~y~~~~~~ 465 (781)
...++. +......+.....+.+++++.+|||||++.+....+.. ....+. .+ |+|.++|+..... ...
T Consensus 72 ---~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~--~~~~~~~~~~~p~v~~~h~~~~~~---~~~ 142 (394)
T 2jjm_A 72 ---VNQYSV-FQYPPYDLALASKMAEVAQRENLDILHVHYAIPHAICA--YLAKQMIGERIKIVTTLHGTDITV---LGS 142 (394)
T ss_dssp ---CC-----CCSCCHHHHHHHHHHHHHHHHTCSEEEECSSTTHHHHH--HHHHHHTTTCSEEEEECCHHHHHT---TTT
T ss_pred ---cccccc-cccccccHHHHHHHHHHHHHcCCCEEEEcchhHHHHHH--HHHHHhhcCCCCEEEEEecCcccc---cCC
Confidence 000000 00000001112457778888999999999765433222 212222 14 8888888643211 111
Q ss_pred chhHHHHHHHHHHHHHHhcCCEEEEcChhhhhc-------CCCcEEeeCCCCCCCCCCCcchhhHhhhCcCCCCcEEEEE
Q 003992 466 GALQAFFVKHINNWVTRAYCDKVLRLSAATQDL-------PKSVICNVHGVNPKFLQIGEKVATDREQGQQAFSKGAYFL 538 (781)
Q Consensus 466 ~~~~~~l~k~l~r~l~r~~aD~VI~vS~~~k~l-------~~kivvi~nGVD~~~f~p~~~~~~r~~~Gi~~~~~~ILfV 538 (781)
.. .+..+.+++.+ .+|.|+++|+.+++. ..++.+++||+|+..+.+......+..++++++.+.++|+
T Consensus 143 ~~----~~~~~~~~~~~-~ad~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 217 (394)
T 2jjm_A 143 DP----SLNNLIRFGIE-QSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKRDMTQLKKEYGISESEKILIHI 217 (394)
T ss_dssp CT----TTHHHHHHHHH-HSSEEEESCHHHHHHHHHHTCCSSCEEECCCCCCTTTCCCCCCHHHHHHTTCC---CEEEEE
T ss_pred CH----HHHHHHHHHHh-hCCEEEECCHHHHHHHHHhhCCcccEEEecCCccHHhcCCcchHHHHHHcCCCCCCeEEEEe
Confidence 11 11223344444 699999999977652 2478899999998888765555567778876778899999
Q ss_pred eeccCccCHHHHHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCc--EEEcCCCCCHHHHHhcccEEEEccCCCC
Q 003992 539 GKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLN--LNFQKGRDHADDSLHGYKVFINPSISDV 616 (781)
Q Consensus 539 GRL~~~KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~--V~FlG~v~~~e~ly~~ADVfVlPS~~Eg 616 (781)
|++.+.||++.+++|+..+.++ ++++|+|+|+|+..++++++++++++. |.|+|+.++...+|+.||++|+||..|+
T Consensus 218 G~~~~~Kg~~~li~a~~~l~~~-~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~e~ 296 (394)
T 2jjm_A 218 SNFRKVKRVQDVVQAFAKIVTE-VDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSEKES 296 (394)
T ss_dssp CCCCGGGTHHHHHHHHHHHHHS-SCCEEEEECCCTTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSEEEECCSCCS
T ss_pred eccccccCHHHHHHHHHHHHhh-CCCEEEEECCchHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCEEEeccccCC
Confidence 9999999999999999999876 679999999999999999999999875 9999998777799999999999999999
Q ss_pred ChHHHHHHHHhCCcEEEeCCCCcceeec-CCccccC--CCHHHHHHHHHHHHhCCCCCCCh-----HHH-HcCCHHHHHH
Q 003992 617 LCTATAEALAMGKFVICADHPSNEFFRS-FPNCLTY--KTSEDFVARVKEALANDPQPLTP-----EQR-YNLSWEAATQ 687 (781)
Q Consensus 617 fGlviLEAMA~G~PVVaSd~gg~g~L~~-~~ngv~~--~D~eeLa~aI~~LL~d~~~r~~m-----~~~-~~fSWe~iae 687 (781)
||++++||||||+|||+++.|+...++. +.+|+.. +|+++++++|.++++|++.+.+| +.. +.|+|+.+++
T Consensus 297 ~~~~~~EAma~G~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 376 (394)
T 2jjm_A 297 FGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVS 376 (394)
T ss_dssp CCHHHHHHHHTTCCEEEECCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred CchHHHHHHhcCCCEEEecCCChHHHhhcCCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 9999999999999999999998866543 4566444 69999999999999998777666 223 7899999999
Q ss_pred HHHHHhhhcccccc
Q 003992 688 RFIEYSELNRILNN 701 (781)
Q Consensus 688 rll~~Ye~~~vl~~ 701 (781)
+++++|+ +++++
T Consensus 377 ~~~~~~~--~~~~~ 388 (394)
T 2jjm_A 377 QYETIYY--DVLRD 388 (394)
T ss_dssp HHHHHHH--HTC--
T ss_pred HHHHHHH--HHHhh
Confidence 9999999 87754
No 5
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=100.00 E-value=4.5e-35 Score=331.31 Aligned_cols=370 Identities=10% Similarity=0.029 Sum_probs=256.1
Q ss_pred CCEEEEEeCccCCC-----------cCcccccHHHHHHHHHHcCCCEEEEEeccCCCCCCccccccccccCCchhhHHHH
Q 003992 309 KRNVAIVTTASLPW-----------MTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMR 377 (781)
Q Consensus 309 ~~rIaI~TtaflP~-----------~~G~av~~l~rA~~Lak~G~~~VtlVvP~l~~~dq~~v~p~i~f~~p~~qe~yir 377 (781)
+|||+|+|..|+|. .+|++......+.+|++.|+ +|+++++....... ..|.. .+.
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~-~V~v~~~~~~~~~~-~~~~~-~~~---------- 73 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGV-QVDIITRRIKDENW-PEFSG-EID---------- 73 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTC-EEEEEEECCCBTTB-GGGCC-SEE----------
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCC-eEEEEeCCCCcccc-cchhh-hHH----------
Confidence 59999999988884 57777777778999999996 99999864221100 00000 000
Q ss_pred HHHHHhhCCcccceeeccCCccc--ccccccCc-----hHhHHhhccc--CCCcEEEECCCchhHHHHHHHHHHhhcC-C
Q 003992 378 NWLEERVGFKADFKISFYPGKFS--KERRSIIP-----AGDTSQFIPS--KDADIAILEEPEHLNWYHHGKRWTDKFN-H 447 (781)
Q Consensus 378 ~~l~~rig~~~~~~i~~yP~~~~--~~~~sil~-----v~~L~k~I~~--~kPDVIhl~~P~~l~~~~~g~~~akk~~-p 447 (781)
. ..-..++.+..+|.... .....++. ...+.+++++ .+|||||++.+. .++++ ..+++..+ |
T Consensus 74 ----~-~~~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~-~~~~~--~~~~~~~~~p 145 (499)
T 2r60_A 74 ----Y-YQETNKVRIVRIPFGGDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGD-GGLAG--VLLKNIKGLP 145 (499)
T ss_dssp ----E-CTTCSSEEEEEECCSCSSCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHH-HHHHH--HHHHHHHCCC
T ss_pred ----h-ccCCCCeEEEEecCCCcCCcCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEcCCc-chHHH--HHHHHhcCCc
Confidence 0 00001111111111000 00001111 1346667776 689999998643 23333 44555566 9
Q ss_pred EEEEEECCcHHHHHHhhcc-----hhHHH----HHHHHHHHHHHhcCCEEEEcChhhhhc-------C--------CCcE
Q 003992 448 VVGVVHTNYLEYIKREKNG-----ALQAF----FVKHINNWVTRAYCDKVLRLSAATQDL-------P--------KSVI 503 (781)
Q Consensus 448 vV~ivHt~y~~y~~~~~~~-----~~~~~----l~k~l~r~l~r~~aD~VI~vS~~~k~l-------~--------~kiv 503 (781)
+|.++|+.+.......... ..... ....+++++.+ .||.||++|+.+++. . .++.
T Consensus 146 ~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~ 224 (499)
T 2r60_A 146 FTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMS-YADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFS 224 (499)
T ss_dssp EEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHH-HCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEE
T ss_pred EEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHh-cCCEEEECCHHHHHHHHhhhcccccccccCCCCeE
Confidence 9999998754332211100 01110 12233445555 699999999976552 1 2568
Q ss_pred EeeCCCCCCCCCCCcc----hhhHhhhC-----cCCCCcEEEEEeeccCccCHHHHHHHHHHhhccCCC-cEEEEEeC--
Q 003992 504 CNVHGVNPKFLQIGEK----VATDREQG-----QQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDG-FKLDVFGN-- 571 (781)
Q Consensus 504 vi~nGVD~~~f~p~~~----~~~r~~~G-----i~~~~~~ILfVGRL~~~KGid~LLeA~~~L~~~~p~-i~LvIVG~-- 571 (781)
+++||||...+.+... ...+.++| ++++.++++|+||+.+.||++.|++|+..+.++.++ ++|+|+|+
T Consensus 225 vi~ngvd~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~ 304 (499)
T 2r60_A 225 VIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIE 304 (499)
T ss_dssp ECCCCBCTTTSSSCCCHHHHHHHHHHHHHHSCGGGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCS
T ss_pred EECCCcChhhcCccchhhhHHHHHHHhcccccccCCCCcEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCCC
Confidence 8999999887766533 44566677 667788999999999999999999999999776554 58999998
Q ss_pred CC------C-------HHHHHHHHHhcCCc--EEEcCCCCCHH--HHHhcc----cEEEEccCCCCChHHHHHHHHhCCc
Q 003992 572 GE------D-------AYEVQSAAKRLDLN--LNFQKGRDHAD--DSLHGY----KVFINPSISDVLCTATAEALAMGKF 630 (781)
Q Consensus 572 Gp------~-------~~~L~~~a~~lgL~--V~FlG~v~~~e--~ly~~A----DVfVlPS~~EgfGlviLEAMA~G~P 630 (781)
|+ . .++++++++++++. |.|+|++++.+ .+|+.| |+||+||.+|+||++++||||||+|
T Consensus 305 ~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~P 384 (499)
T 2r60_A 305 NPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLP 384 (499)
T ss_dssp BTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCC
T ss_pred CcccccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCC
Confidence 44 1 78899999999886 99999997665 999999 9999999999999999999999999
Q ss_pred EEEeCCCCcceeec-CCccc--cCCCHHHHHHHHHHHHhCCCCCCCh-----H-HHHcCCHHHHHHHHHHHhhhcccccc
Q 003992 631 VICADHPSNEFFRS-FPNCL--TYKTSEDFVARVKEALANDPQPLTP-----E-QRYNLSWEAATQRFIEYSELNRILNN 701 (781)
Q Consensus 631 VVaSd~gg~g~L~~-~~ngv--~~~D~eeLa~aI~~LL~d~~~r~~m-----~-~~~~fSWe~iaerll~~Ye~~~vl~~ 701 (781)
||+|+.|+...++. +.+|+ ..+|+++++++|.++++|++.+.+| + ..+.|||+.++++++++|+ +++++
T Consensus 385 vI~s~~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~--~~~~~ 462 (499)
T 2r60_A 385 AVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQ--EIADR 462 (499)
T ss_dssp EEEESSBHHHHHTGGGTSSEEECTTCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHH--HHHHC
T ss_pred EEEecCCCHHHHhcCCceEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--HHHhh
Confidence 99999988765443 44554 3479999999999999998777766 2 2345999999999999999 88865
Q ss_pred C
Q 003992 702 N 702 (781)
Q Consensus 702 ~ 702 (781)
.
T Consensus 463 ~ 463 (499)
T 2r60_A 463 K 463 (499)
T ss_dssp -
T ss_pred h
Confidence 4
No 6
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=100.00 E-value=1.4e-34 Score=318.68 Aligned_cols=350 Identities=15% Similarity=0.105 Sum_probs=245.5
Q ss_pred CCCCEEEEEeCccCCCcCcccccHHHHHHHHHHcCCCEEEEEeccCCCCCCccccccccccCCchhhHHHHHHHHHhhCC
Q 003992 307 DKKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGF 386 (781)
Q Consensus 307 ~~~~rIaI~TtaflP~~~G~av~~l~rA~~Lak~G~~~VtlVvP~l~~~dq~~v~p~i~f~~p~~qe~yir~~l~~rig~ 386 (781)
-++|||+++++. +..+|++......+.+|.+.|+ +|++++..-. ...+. .... +...+ .+.
T Consensus 38 ~~~mkIl~v~~~--~~~GG~~~~~~~l~~~L~~~G~-~v~v~~~~~~----~~~~~--------~~~~-~~~~~---~~~ 98 (416)
T 2x6q_A 38 LKGRSFVHVNST--SFGGGVAEILHSLVPLLRSIGI-EARWFVIEGP----TEFFN--------VTKT-FHNAL---QGN 98 (416)
T ss_dssp TTTCEEEEEESC--SSSSTHHHHHHHHHHHHHHTTC-EEEEEECCCC----HHHHH--------HHHH-HHHHH---TTC
T ss_pred hhccEEEEEeCC--CCCCCHHHHHHHHHHHHHhCCC-eEEEEEccCC----cchhh--------hhcc-cceee---ccc
Confidence 357999999987 3567877666678999999985 9998875210 00000 0000 01111 111
Q ss_pred cccceeeccCCcccccccccCc-hHhHHhhcccCCCcEEEECCCchhHHHHHHHHHHhhcCCEEEEEECCcHHHHHHhhc
Q 003992 387 KADFKISFYPGKFSKERRSIIP-AGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKN 465 (781)
Q Consensus 387 ~~~~~i~~yP~~~~~~~~sil~-v~~L~k~I~~~kPDVIhl~~P~~l~~~~~g~~~akk~~pvV~ivHt~y~~y~~~~~~ 465 (781)
. .+. ++.. ....+.. ...+.+.+++.+|||||++.+....+.. +.++..|++.++|+.+....
T Consensus 99 ~-~~~---~~~~---~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~----~~~~~~p~v~~~h~~~~~~~----- 162 (416)
T 2x6q_A 99 E-SLK---LTEE---MKELYLNVNRENSKFIDLSSFDYVLVHDPQPAALIE----FYEKKSPWLWRCHIDLSSPN----- 162 (416)
T ss_dssp C-SCC---CCHH---HHHHHHHHHHHHHHSSCGGGSSEEEEESSTTGGGGG----GSCCCSCEEEECCSCCSSCC-----
T ss_pred c-ccc---ccHH---HHHHHHHHHHHHHHHHhhcCCCEEEEeccchhhHHH----HHHhcCCEEEEEccccCCcc-----
Confidence 0 000 1100 0000001 1235667788899999999876543322 22222489999998653210
Q ss_pred chhHHHHHHHHHHHHHHhcCCEEE-EcChhhhh-cC-CCcEEeeCCCCCCCCCCC-----cchhhHhhhCcCCCCcEEEE
Q 003992 466 GALQAFFVKHINNWVTRAYCDKVL-RLSAATQD-LP-KSVICNVHGVNPKFLQIG-----EKVATDREQGQQAFSKGAYF 537 (781)
Q Consensus 466 ~~~~~~l~k~l~r~l~r~~aD~VI-~vS~~~k~-l~-~kivvi~nGVD~~~f~p~-----~~~~~r~~~Gi~~~~~~ILf 537 (781)
..+.+.+.+++. .+|.++ ++|+..++ +. .++.+++||||+..+.+. .....+..++++++.++++|
T Consensus 163 ----~~~~~~~~~~~~--~~~~~i~~~s~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~ 236 (416)
T 2x6q_A 163 ----REFWEFLRRFVE--KYDRYIFHLPEYVQPELDRNKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEKPIITQ 236 (416)
T ss_dssp ----HHHHHHHHHHHT--TSSEEEESSGGGSCTTSCTTTEEECCCCBCTTSTTTSCCCHHHHHHHHHHTTCCTTSCEEEE
T ss_pred ----HHHHHHHHHHHH--hCCEEEEechHHHHhhCCccceEEeCCCCChhhhcccccChhhHHHHHHHhCCCCCCcEEEE
Confidence 122233333333 366665 66776665 44 478899999997655321 22345667788778899999
Q ss_pred EeeccCccCHHHHHHHHHHhhccCCCcEEEEEeCCCC-----HHHHHHHHHhcCCc--EEEcCCCC---C--HHHHHhcc
Q 003992 538 LGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGED-----AYEVQSAAKRLDLN--LNFQKGRD---H--ADDSLHGY 605 (781)
Q Consensus 538 VGRL~~~KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~-----~~~L~~~a~~lgL~--V~FlG~v~---~--~e~ly~~A 605 (781)
+||+.+.||++.|++|+..+.++.|+++|+|+|+|+. .+.++++++++++. |.|+|+++ + ...+|+.|
T Consensus 237 vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~a 316 (416)
T 2x6q_A 237 VSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRAS 316 (416)
T ss_dssp ECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHC
T ss_pred EeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhC
Confidence 9999999999999999999998889999999999986 46788888888874 99999665 2 33899999
Q ss_pred cEEEEccCCCCChHHHHHHHHhCCcEEEeCCCCcceee-cCCccccCCCHHHHHHHHHHHHhCCCCCCCh-----H-HHH
Q 003992 606 KVFINPSISDVLCTATAEALAMGKFVICADHPSNEFFR-SFPNCLTYKTSEDFVARVKEALANDPQPLTP-----E-QRY 678 (781)
Q Consensus 606 DVfVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~g~L~-~~~ngv~~~D~eeLa~aI~~LL~d~~~r~~m-----~-~~~ 678 (781)
|+||+||.+|+||++++||||||+|||+++.|+...++ .+.+|+...|+++++++|.++++|++.+.+| + ..+
T Consensus 317 d~~v~ps~~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~~~g~l~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~ 396 (416)
T 2x6q_A 317 DVILQMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLVRDANEAVEVVLYLLKHPEVSKEMGAKAKERVRK 396 (416)
T ss_dssp SEEEECCSSCSSCHHHHHHHHTTCCEEEESCHHHHHHCCBTTTEEEESSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCcCCCccHHHHHHHcCCCEEEccCCCChhheecCCCeEEECCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998876544 4566766669999999999999998877766 1 235
Q ss_pred cCCHHHHHHHHHHHhhhcccc
Q 003992 679 NLSWEAATQRFIEYSELNRIL 699 (781)
Q Consensus 679 ~fSWe~iaerll~~Ye~~~vl 699 (781)
.|||+.++++++++|+ +++
T Consensus 397 ~fs~~~~~~~~~~~~~--~l~ 415 (416)
T 2x6q_A 397 NFIITKHMERYLDILN--SLG 415 (416)
T ss_dssp HTBHHHHHHHHHHHHH--TC-
T ss_pred HcCHHHHHHHHHHHHH--Hhh
Confidence 8999999999999998 654
No 7
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=100.00 E-value=1.8e-34 Score=324.43 Aligned_cols=373 Identities=12% Similarity=0.029 Sum_probs=246.0
Q ss_pred CEEEEEeCccCCC--cCcccccHHHHHHHHHHcCCCEEEEEeccCCCCCCccccccc----cccCCchhhHHHHHHHHHh
Q 003992 310 RNVAIVTTASLPW--MTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNV----TFCSPEEQENYMRNWLEER 383 (781)
Q Consensus 310 ~rIaI~TtaflP~--~~G~av~~l~rA~~Lak~G~~~VtlVvP~l~~~dq~~v~p~i----~f~~p~~qe~yir~~l~~r 383 (781)
|||+++|+.|+|+ .+|++......+.+|++.|| +|+++++...... ..+... .+........+ ...
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~-~V~vi~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~- 72 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGV-DARVLLPAFPDIR--RGVTDAQVVSRRDTFAGHITL----LFG- 72 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTC-EEEEEEECCHHHH--HHCTTCEEEEEECCTTCCEEE----EEE-
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCC-EEEEEecCccccc--cccccceeEEEecccCCcEEE----EEE-
Confidence 8999999999996 67888777788999999996 9999997521100 000000 00000000000 000
Q ss_pred hCCcccceeeccCC---------cccc--------c-ccccCchHhHHhhcc----cCCCcEEEECCCchhHHHHHHHHH
Q 003992 384 VGFKADFKISFYPG---------KFSK--------E-RRSIIPAGDTSQFIP----SKDADIAILEEPEHLNWYHHGKRW 441 (781)
Q Consensus 384 ig~~~~~~i~~yP~---------~~~~--------~-~~sil~v~~L~k~I~----~~kPDVIhl~~P~~l~~~~~g~~~ 441 (781)
...++.+..++. .+.. . ....+....+.++++ +.+|||||++.+.. +++. ..+
T Consensus 73 --~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~-~~~~--~~~ 147 (485)
T 2qzs_A 73 --HYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHA-GLAP--AYL 147 (485)
T ss_dssp --EETTEEEEEEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGG-TTHH--HHH
T ss_pred --EECCcEEEEEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhccCCCCCEEEeeccch-hHHH--HHH
Confidence 000111111110 0000 0 000001123444444 37999999998542 2222 223
Q ss_pred H-hhcC-CEEEEEECCcHHH-HHH--h-hcchhHH--------HH-HHHHHHHHHHhcCCEEEEcChhhhhcC-------
Q 003992 442 T-DKFN-HVVGVVHTNYLEY-IKR--E-KNGALQA--------FF-VKHINNWVTRAYCDKVLRLSAATQDLP------- 499 (781)
Q Consensus 442 a-kk~~-pvV~ivHt~y~~y-~~~--~-~~~~~~~--------~l-~k~l~r~l~r~~aD~VI~vS~~~k~l~------- 499 (781)
+ +..+ |+|.++|+.+... ... . ..+.... +. ...+.+...+ .+|.|+++|+.+++..
T Consensus 148 ~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ad~vi~~S~~~~~~~~~~~~~~ 226 (485)
T 2qzs_A 148 AARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLY-YADHITAVSPTYAREITEPQFAY 226 (485)
T ss_dssp HHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHH-HCSEEEESSHHHHHHTTSHHHHT
T ss_pred hhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHH-hcCeEEecCHHHHHHHhccccCc
Confidence 3 4456 9999999853210 000 0 0000000 00 0122333444 6999999999765521
Q ss_pred ------------CCcEEeeCCCCCCCCCCCc-------------------chhhHhhhCcCC--CCcEEEEEeeccCccC
Q 003992 500 ------------KSVICNVHGVNPKFLQIGE-------------------KVATDREQGQQA--FSKGAYFLGKMVWAKG 546 (781)
Q Consensus 500 ------------~kivvi~nGVD~~~f~p~~-------------------~~~~r~~~Gi~~--~~~~ILfVGRL~~~KG 546 (781)
.++.+++||||.+.+.+.. +...++++|+++ +.++++|+||+.++||
T Consensus 227 ~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~Kg 306 (485)
T 2qzs_A 227 GMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKG 306 (485)
T ss_dssp TCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEEEEEEEESGGGC
T ss_pred chHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCCCeEEEEeccCccccC
Confidence 5678999999988776542 234566778765 6789999999999999
Q ss_pred HHHHHHHHHHhhccCCCcEEEEEeCCC--CHHHHHHHHHhcCCcEE-EcCCCCCH-HHHHhcccEEEEccCCCCChHHHH
Q 003992 547 YRELIDLLAKHKNDLDGFKLDVFGNGE--DAYEVQSAAKRLDLNLN-FQKGRDHA-DDSLHGYKVFINPSISDVLCTATA 622 (781)
Q Consensus 547 id~LLeA~~~L~~~~p~i~LvIVG~Gp--~~~~L~~~a~~lgL~V~-FlG~v~~~-e~ly~~ADVfVlPS~~EgfGlviL 622 (781)
++.|++|+..+.+ ++++|+|+|+|+ ..+.+++++++++-+|. |+|+.++. ..+|+.||+||+||.+|+||++++
T Consensus 307 ~~~li~a~~~l~~--~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv~v~pS~~E~~g~~~l 384 (485)
T 2qzs_A 307 LDLVLEALPGLLE--QGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQL 384 (485)
T ss_dssp HHHHHHHHHHHHH--TTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHH
T ss_pred HHHHHHHHHHHhh--CCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHhCCEEEECCccCCCcHHHH
Confidence 9999999999976 489999999997 46888999988875575 88884443 389999999999999999999999
Q ss_pred HHHHhCCcEEEeCCCCcceeec-C---------Ccccc--CCCHHHHHHHHHHHH---hCCCCCCCh---HHHHcCCHHH
Q 003992 623 EALAMGKFVICADHPSNEFFRS-F---------PNCLT--YKTSEDFVARVKEAL---ANDPQPLTP---EQRYNLSWEA 684 (781)
Q Consensus 623 EAMA~G~PVVaSd~gg~g~L~~-~---------~ngv~--~~D~eeLa~aI~~LL---~d~~~r~~m---~~~~~fSWe~ 684 (781)
||||||+|||+|++|+...++. + .+|+. .+|+++|+++|.+++ +|++.+.+| ...+.|||+.
T Consensus 385 EAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~ 464 (485)
T 2qzs_A 385 YGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQV 464 (485)
T ss_dssp HHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHCCCCHHH
T ss_pred HHHHCCCCEEECCCCCccceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCHHH
Confidence 9999999999999988765544 3 46644 379999999999999 677776666 2347899999
Q ss_pred HHHHHHHHhhhccccc
Q 003992 685 ATQRFIEYSELNRILN 700 (781)
Q Consensus 685 iaerll~~Ye~~~vl~ 700 (781)
++++++++|+ +++.
T Consensus 465 ~~~~~~~ly~--~~~~ 478 (485)
T 2qzs_A 465 AAKSYRELYY--RLKL 478 (485)
T ss_dssp HHHHHHHHHH--HHC-
T ss_pred HHHHHHHHHH--Hhhh
Confidence 9999999999 6654
No 8
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=100.00 E-value=9.5e-35 Score=316.62 Aligned_cols=353 Identities=17% Similarity=0.204 Sum_probs=249.5
Q ss_pred CCCCCEEEEEeCccCCCcCcccccHHHHHHHHHHcCCCEEEEEeccCCCCCCccccccccccCCchhhHHHHHHHHHhhC
Q 003992 306 SDKKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVG 385 (781)
Q Consensus 306 ~~~~~rIaI~TtaflP~~~G~av~~l~rA~~Lak~G~~~VtlVvP~l~~~dq~~v~p~i~f~~p~~qe~yir~~l~~rig 385 (781)
.+++|||+|++..++|..+|++......+.+|.+.|+ +|+++++...... ++. +..... .+ +.
T Consensus 17 ~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~-~V~v~~~~~~~~~----~~~--~~~~~~--~~--------~~ 79 (406)
T 2gek_A 17 RGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGH-EVSVLAPASPHVK----LPD--YVVSGG--KA--------VP 79 (406)
T ss_dssp ----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTC-EEEEEESCCTTSC----CCT--TEEECC--CC--------C-
T ss_pred CCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCC-eEEEEecCCcccc----CCc--ccccCC--cE--------Ee
Confidence 4568999999988878878888777888999999986 9999987432110 011 000000 00 00
Q ss_pred CcccceeeccCCcccccccccCchHhHHhhcccCCCcEEEECCCchhHHHHHHHHHHhhcC-CEEEEEECCcHHHHHHhh
Q 003992 386 FKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREK 464 (781)
Q Consensus 386 ~~~~~~i~~yP~~~~~~~~sil~v~~L~k~I~~~kPDVIhl~~P~~l~~~~~g~~~akk~~-pvV~ivHt~y~~y~~~~~ 464 (781)
++ + ................+.+++++.+||+||++.+....+ . ..+++..+ |+|.++|+.+.....
T Consensus 80 ~~------~-~~~~~~~~~~~~~~~~l~~~l~~~~~Dii~~~~~~~~~~-~--~~~~~~~~~~~i~~~h~~~~~~~~--- 146 (406)
T 2gek_A 80 IP------Y-NGSVARLRFGPATHRKVKKWIAEGDFDVLHIHEPNAPSL-S--MLALQAAEGPIVATFHTSTTKSLT--- 146 (406)
T ss_dssp ------------------CCHHHHHHHHHHHHHHCCSEEEEECCCSSSH-H--HHHHHHEESSEEEEECCCCCSHHH---
T ss_pred cc------c-cCCcccccccHHHHHHHHHHHHhcCCCEEEECCccchHH-H--HHHHHhcCCCEEEEEcCcchhhhh---
Confidence 00 0 000000000000124577888888999999998765433 2 33445545 999999987643211
Q ss_pred cchhHHHHHHHHHHHHHHhcCCEEEEcChhhhh-----cC-CCcEEeeCCCCCCCCCCCcchhhHhhhCcCCCCcEEEEE
Q 003992 465 NGALQAFFVKHINNWVTRAYCDKVLRLSAATQD-----LP-KSVICNVHGVNPKFLQIGEKVATDREQGQQAFSKGAYFL 538 (781)
Q Consensus 465 ~~~~~~~l~k~l~r~l~r~~aD~VI~vS~~~k~-----l~-~kivvi~nGVD~~~f~p~~~~~~r~~~Gi~~~~~~ILfV 538 (781)
...+.+.+. .+.+ .+|.++++|+..++ +. .++ +++||+|...+.+.... .+...+.+.++|+
T Consensus 147 ----~~~~~~~~~-~~~~-~~d~ii~~s~~~~~~~~~~~~~~~~-vi~~~v~~~~~~~~~~~-----~~~~~~~~~i~~~ 214 (406)
T 2gek_A 147 ----LSVFQGILR-PYHE-KIIGRIAVSDLARRWQMEALGSDAV-EIPNGVDVASFADAPLL-----DGYPREGRTVLFL 214 (406)
T ss_dssp ----HHHHHSTTH-HHHT-TCSEEEESSHHHHHHHHHHHSSCEE-ECCCCBCHHHHHTCCCC-----TTCSCSSCEEEEE
T ss_pred ----HHHHHHHHH-HHHh-hCCEEEECCHHHHHHHHHhcCCCcE-EecCCCChhhcCCCchh-----hhccCCCeEEEEE
Confidence 122222233 3333 69999999997755 22 346 89999997655432211 1222245789999
Q ss_pred eec-cCccCHHHHHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHH--HHHhcccEEEEccC-C
Q 003992 539 GKM-VWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHAD--DSLHGYKVFINPSI-S 614 (781)
Q Consensus 539 GRL-~~~KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e--~ly~~ADVfVlPS~-~ 614 (781)
|++ .+.||++.+++++..+.++.|+++|+|+|+|+. +.+++.++++.-.|.|+|++++.+ .+|+.||++|+||. .
T Consensus 215 G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~ 293 (406)
T 2gek_A 215 GRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE-DELREQAGDLAGHLRFLGQVDDATKASAMRSADVYCAPHLGG 293 (406)
T ss_dssp SCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSEEEECCCSC
T ss_pred eeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCEEEecCCCC
Confidence 999 999999999999999998889999999999998 889888887633399999999884 99999999999996 9
Q ss_pred CCChHHHHHHHHhCCcEEEeCCCCcceeec-CCccccC--CCHHHHHHHHHHHHhCCCCCCCh-----HHHHcCCHHHHH
Q 003992 615 DVLCTATAEALAMGKFVICADHPSNEFFRS-FPNCLTY--KTSEDFVARVKEALANDPQPLTP-----EQRYNLSWEAAT 686 (781)
Q Consensus 615 EgfGlviLEAMA~G~PVVaSd~gg~g~L~~-~~ngv~~--~D~eeLa~aI~~LL~d~~~r~~m-----~~~~~fSWe~ia 686 (781)
|+||++++||||||+|||+++.|+...+.. +.+|+.+ +|+++++++|.++++|++.+.+| +....|+|+.++
T Consensus 294 e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~ 373 (406)
T 2gek_A 294 ESFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGILEDDQLRAGYVARASERVHRYDWSVVS 373 (406)
T ss_dssp CSSCHHHHHHHHHTCEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGGBHHHHH
T ss_pred CCCchHHHHHHHcCCCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 999999999999999999999987765444 4555444 89999999999999998776666 233489999999
Q ss_pred HHHHHHhhhccccccCC
Q 003992 687 QRFIEYSELNRILNNNK 703 (781)
Q Consensus 687 erll~~Ye~~~vl~~~~ 703 (781)
++++++|+ +++++..
T Consensus 374 ~~~~~~~~--~~~~~~~ 388 (406)
T 2gek_A 374 AQIMRVYE--TVSGAGI 388 (406)
T ss_dssp HHHHHHHH--HHCCTTC
T ss_pred HHHHHHHH--HHHhhcc
Confidence 99999999 8886553
No 9
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=100.00 E-value=2e-34 Score=324.02 Aligned_cols=376 Identities=13% Similarity=0.065 Sum_probs=245.9
Q ss_pred CEEEEEeCccCCC--cCcccccHHHHHHHHHHcCCCEEEEEeccCCCCCCccccccc----cccCCchhhHHHHHHHHHh
Q 003992 310 RNVAIVTTASLPW--MTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNV----TFCSPEEQENYMRNWLEER 383 (781)
Q Consensus 310 ~rIaI~TtaflP~--~~G~av~~l~rA~~Lak~G~~~VtlVvP~l~~~dq~~v~p~i----~f~~p~~qe~yir~~l~~r 383 (781)
|||+++|+.|+|+ .+|++......+.+|+++|| +|+|+++...... ..+... .+..+..... .....
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~-~V~vi~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~- 73 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGV-RTRTLIPGYPAVK--AAVTDPVKCFEFTDLLGEKA---DLLEV- 73 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTC-EEEEEEECCHHHH--HHCCSCEEEEEESCSSSCCE---EEEEE-
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCC-eEEEEeccccccc--ccccccceeEEEEEecCCeE---EEEEE-
Confidence 8999999999995 67877777788999999995 9999997521100 000000 0000000000 00000
Q ss_pred hCCcccceeeccCC---------cccc--------c-ccc---cCchHhHHhhc-ccCCCcEEEECCCchhHHHHHHHHH
Q 003992 384 VGFKADFKISFYPG---------KFSK--------E-RRS---IIPAGDTSQFI-PSKDADIAILEEPEHLNWYHHGKRW 441 (781)
Q Consensus 384 ig~~~~~~i~~yP~---------~~~~--------~-~~s---il~v~~L~k~I-~~~kPDVIhl~~P~~l~~~~~g~~~ 441 (781)
...++.+..++. .+.. . ... ...+..+.+.+ ++.+|||||++.+. .+++. ..+
T Consensus 74 --~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~-~~~~~--~~~ 148 (485)
T 1rzu_A 74 --QHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQ-AAMTP--VYM 148 (485)
T ss_dssp --EETTEEEEEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHH-HTTHH--HHH
T ss_pred --EecCceEEEEeChHHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHhccCCCCCEEEecccc-hhHHH--HHH
Confidence 000111111110 0000 0 000 00112233334 67899999998732 22222 223
Q ss_pred Hhh--cC-CEEEEEECCcHHH-HHH--h-hcchhHHHH---------HHHHHHHHHHhcCCEEEEcChhhhhcC------
Q 003992 442 TDK--FN-HVVGVVHTNYLEY-IKR--E-KNGALQAFF---------VKHINNWVTRAYCDKVLRLSAATQDLP------ 499 (781)
Q Consensus 442 akk--~~-pvV~ivHt~y~~y-~~~--~-~~~~~~~~l---------~k~l~r~l~r~~aD~VI~vS~~~k~l~------ 499 (781)
++. .+ |+|.++|+.+... ... . ..+.....+ ...+.+.+.+ ++|.|+++|+.+++..
T Consensus 149 ~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ad~vi~~S~~~~~~~~~~~~g 227 (485)
T 1rzu_A 149 RYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQ-TATALSTVSPSYAEEILTAEFG 227 (485)
T ss_dssp HHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHH-HCSEEEESCHHHHHHTTSHHHH
T ss_pred hhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHh-hcCEEEecCHhHHHHHhccccC
Confidence 332 55 9999999853210 000 0 000000000 0112334444 6999999999776521
Q ss_pred -----------CCcEEeeCCCCCCCCCCCc-------------------chhhHhhhCcCCC-CcEEEEEeeccCccCHH
Q 003992 500 -----------KSVICNVHGVNPKFLQIGE-------------------KVATDREQGQQAF-SKGAYFLGKMVWAKGYR 548 (781)
Q Consensus 500 -----------~kivvi~nGVD~~~f~p~~-------------------~~~~r~~~Gi~~~-~~~ILfVGRL~~~KGid 548 (781)
.++.+++||||.+.|.+.. +...+.++|++.+ .++++|+||+.++||++
T Consensus 228 ~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~ 307 (485)
T 1rzu_A 228 MGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGID 307 (485)
T ss_dssp TTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHH
T ss_pred cchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcCCCCCCCeEEEEEccCccccCHH
Confidence 3578899999988776542 2345667787764 67999999999999999
Q ss_pred HHHHHHHHhhccCCCcEEEEEeCCCC--HHHHHHHHHhcCCcEE-EcCCCCCH-HHHHhcccEEEEccCCCCChHHHHHH
Q 003992 549 ELIDLLAKHKNDLDGFKLDVFGNGED--AYEVQSAAKRLDLNLN-FQKGRDHA-DDSLHGYKVFINPSISDVLCTATAEA 624 (781)
Q Consensus 549 ~LLeA~~~L~~~~p~i~LvIVG~Gp~--~~~L~~~a~~lgL~V~-FlG~v~~~-e~ly~~ADVfVlPS~~EgfGlviLEA 624 (781)
.|++|+..+.+ ++++|+|+|+|+. .+.+++++++++-+|. |+|+.++. ..+|+.||+||+||.+|+||++++||
T Consensus 308 ~li~a~~~l~~--~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEA 385 (485)
T 1rzu_A 308 LMAEAVDEIVS--LGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYA 385 (485)
T ss_dssp HHHTTHHHHHH--TTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHH
T ss_pred HHHHHHHHHHh--cCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHhcCCEEEECcccCCCCHHHHHH
Confidence 99999999976 4899999999974 6888999988875576 78884443 38999999999999999999999999
Q ss_pred HHhCCcEEEeCCCCcceeec-C---------Ccccc--CCCHHHHHHHHHHHH---hCCCCCCCh---HHHHcCCHHHHH
Q 003992 625 LAMGKFVICADHPSNEFFRS-F---------PNCLT--YKTSEDFVARVKEAL---ANDPQPLTP---EQRYNLSWEAAT 686 (781)
Q Consensus 625 MA~G~PVVaSd~gg~g~L~~-~---------~ngv~--~~D~eeLa~aI~~LL---~d~~~r~~m---~~~~~fSWe~ia 686 (781)
||||+|||+|+.|+..+++. + .+|+. .+|+++|+++|.+++ +|++.+.+| ...+.|||+.++
T Consensus 386 ma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~ 465 (485)
T 1rzu_A 386 LRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMKSDVSWEKSA 465 (485)
T ss_dssp HHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTCCCBHHHHH
T ss_pred HHCCCCEEEeCCCChhheecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhCChHHHH
Confidence 99999999999988765544 3 56644 479999999999999 687776666 233689999999
Q ss_pred HHHHHHhhhccccccC
Q 003992 687 QRFIEYSELNRILNNN 702 (781)
Q Consensus 687 erll~~Ye~~~vl~~~ 702 (781)
++++++|+ ++++.+
T Consensus 466 ~~~~~~y~--~~~~~~ 479 (485)
T 1rzu_A 466 GLYAALYS--QLISKG 479 (485)
T ss_dssp HHHHHHHH--HHTC--
T ss_pred HHHHHHHH--HhhCCC
Confidence 99999999 877544
No 10
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=100.00 E-value=3.2e-34 Score=315.08 Aligned_cols=335 Identities=13% Similarity=0.068 Sum_probs=239.6
Q ss_pred CEEEEEeCccCCCcCcccccHHHHHHHHHHcCCCEEEEEeccCCCCCCccccccccccCCch-hhHHHHHHHHHhhCCcc
Q 003992 310 RNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEE-QENYMRNWLEERVGFKA 388 (781)
Q Consensus 310 ~rIaI~TtaflP~~~G~av~~l~rA~~Lak~G~~~VtlVvP~l~~~dq~~v~p~i~f~~p~~-qe~yir~~l~~rig~~~ 388 (781)
|||+|+++.+ |..+|.+......+.+|++. | +|++++..-. + . ..+.. ... ..... ..+ ..+
T Consensus 1 MkI~~v~~~~-p~~gG~~~~~~~l~~~L~~~-~-~V~v~~~~~~-g-~-~~~~~-----~~~~~~~~~-~~~---~~~-- 63 (413)
T 3oy2_A 1 MKLIIVGAHS-SVPSGYGRVMRAIVPRISKA-H-EVIVFGIHAF-G-R-SVHAN-----IEEFDAQTA-EHV---RGL-- 63 (413)
T ss_dssp CEEEEEEECT-TCCSHHHHHHHHHHHHHTTT-S-EEEEEEESCC-S-C-CSCSS-----SEEEEHHHH-HHH---TTC--
T ss_pred CeEEEecCCC-CCCCCHHHHHHHHHHHHHhc-C-CeEEEeecCC-C-c-ccccc-----cccCCcccc-ccc---ccc--
Confidence 8999998754 77788887777889999998 5 9999875322 1 1 11111 110 00000 000 000
Q ss_pred cceeeccCCcccccccccCchHhHHhhcccCCCcEEEECCCchhHHHHHHHHHHhhcC-----CEEEEEECCcHHHHHHh
Q 003992 389 DFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-----HVVGVVHTNYLEYIKRE 463 (781)
Q Consensus 389 ~~~i~~yP~~~~~~~~sil~v~~L~k~I~~~kPDVIhl~~P~~l~~~~~g~~~akk~~-----pvV~ivHt~y~~y~~~~ 463 (781)
.|. .+....+.+.+++.+|||||++.+..+ +. .......+ +++..+|..+....
T Consensus 64 ------~~~--------~~~~~~l~~~l~~~~~Div~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 122 (413)
T 3oy2_A 64 ------NEQ--------GFYYSGLSEFIDVHKPDIVMIYNDPIV--IG--NYLLAMGKCSHRTKIVLYVDLVSKNIR--- 122 (413)
T ss_dssp ------CST--------TCCHHHHHHHHHHHCCSEEEEEECHHH--HH--HHHHHGGGCCSCCEEEEEECCCSBSCC---
T ss_pred ------ccc--------cchHHHHHHHHHhcCCCEEEEcchHHH--HH--HHHHHhccCCCCCceeeeccccchhhH---
Confidence 000 112234667788889999999944322 22 12222222 34555554432111
Q ss_pred hcchhHHHHHHHHHHHHHHhcCC--EEEEcChhhhh------cCCCcEEeeCCCCCCCCCCCcchhhHhhhCcCC--CCc
Q 003992 464 KNGALQAFFVKHINNWVTRAYCD--KVLRLSAATQD------LPKSVICNVHGVNPKFLQIGEKVATDREQGQQA--FSK 533 (781)
Q Consensus 464 ~~~~~~~~l~k~l~r~l~r~~aD--~VI~vS~~~k~------l~~kivvi~nGVD~~~f~p~~~~~~r~~~Gi~~--~~~ 533 (781)
. .+ +++.+ .+| .++++|+.+++ ...++.+++||||+..+ ...+..+++++ +.+
T Consensus 123 -~---------~~-~~~~~-~~~~~~ii~~S~~~~~~~~~~~~~~~~~vi~ngvd~~~~-----~~~~~~~~~~~~~~~~ 185 (413)
T 3oy2_A 123 -E---------NL-WWIFS-HPKVVGVMAMSKCWISDICNYGCKVPINIVSHFVDTKTI-----YDARKLVGLSEYNDDV 185 (413)
T ss_dssp -G---------GG-GGGGG-CTTEEEEEESSTHHHHHHHHTTCCSCEEECCCCCCCCCC-----TTHHHHTTCGGGTTSE
T ss_pred -H---------HH-HHHHh-ccCCceEEEcCHHHHHHHHHcCCCCceEEeCCCCCHHHH-----HHHHHhcCCCcccCce
Confidence 0 01 22233 577 99999997755 23578899999998776 23455667666 788
Q ss_pred EEEEEeeccCccCHHHHHHHHHHhhccCCCcEEEEEeCCCCH------HHHHHHHHhcCCc---------EEEcCCCCCH
Q 003992 534 GAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDA------YEVQSAAKRLDLN---------LNFQKGRDHA 598 (781)
Q Consensus 534 ~ILfVGRL~~~KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~~------~~L~~~a~~lgL~---------V~FlG~v~~~ 598 (781)
.++|+||+.+.||++.|++|+.++.++.|+++|+|+|+|+.. +.++++++++++. |.|.|++++.
T Consensus 186 ~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~ 265 (413)
T 3oy2_A 186 LFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDE 265 (413)
T ss_dssp EEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHH
T ss_pred EEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCCHH
Confidence 999999999999999999999999988999999999999875 8889999888876 7888999966
Q ss_pred H--HHHhcccEEEEccCCCCChHHHHHHHHhCCcEEEeCCCCcceeec-CCc---------------c----ccCCCHHH
Q 003992 599 D--DSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSNEFFRS-FPN---------------C----LTYKTSED 656 (781)
Q Consensus 599 e--~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~g~L~~-~~n---------------g----v~~~D~ee 656 (781)
+ .+|+.||+||+||.+|+||++++||||||+|||+|+.|+..+++. +.+ | +..+|+++
T Consensus 266 ~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~ 345 (413)
T 3oy2_A 266 RVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDD 345 (413)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHH
T ss_pred HHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCHHH
Confidence 6 899999999999999999999999999999999999998755443 333 3 33489999
Q ss_pred HHHHHHHHHhCCCCCCCh-----HH-HHcCCHHHHHHHHHHHhhhccccccC
Q 003992 657 FVARVKEALANDPQPLTP-----EQ-RYNLSWEAATQRFIEYSELNRILNNN 702 (781)
Q Consensus 657 La~aI~~LL~d~~~r~~m-----~~-~~~fSWe~iaerll~~Ye~~~vl~~~ 702 (781)
|+++| ++++|++.+.+| +. .+.|||+.++++++++|+ +++++.
T Consensus 346 la~~i-~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~--~~~~~~ 394 (413)
T 3oy2_A 346 LVEAF-TFFKDEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFN--SLLRVE 394 (413)
T ss_dssp HHHHH-HHTTSHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHH--HHTC--
T ss_pred HHHHH-HHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--HHHhhc
Confidence 99999 999998887776 22 268999999999999999 888654
No 11
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=100.00 E-value=2.1e-34 Score=310.40 Aligned_cols=342 Identities=13% Similarity=0.074 Sum_probs=237.8
Q ss_pred CEEEEEeCccCCCcCcccccHHHHHHHHHHcCCCEEEEEeccCCCCCCccccccccccCCchhhHHHHHHHHHhhCCccc
Q 003992 310 RNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKAD 389 (781)
Q Consensus 310 ~rIaI~TtaflP~~~G~av~~l~rA~~Lak~G~~~VtlVvP~l~~~dq~~v~p~i~f~~p~~qe~yir~~l~~rig~~~~ 389 (781)
|||++++..|+| .+|++......+.+|++.|+ +|+++++..... .+. +
T Consensus 1 MkIl~i~~~~~~-~gG~~~~~~~l~~~L~~~G~-~V~v~~~~~~~~-----~~~-------------------------~ 48 (374)
T 2iw1_A 1 MIVAFCLYKYFP-FGGLQRDFMRIASTVAARGH-HVRVYTQSWEGD-----CPK-------------------------A 48 (374)
T ss_dssp -CEEEECSEECT-TCHHHHHHHHHHHHHHHTTC-CEEEEESEECSC-----CCT-------------------------T
T ss_pred CeEEEEEeecCC-CcchhhHHHHHHHHHHhCCC-eEEEEecCCCCC-----CCC-------------------------C
Confidence 799999999888 58888777888999999996 999998642110 000 0
Q ss_pred ceeeccCCcccccc-cccCchHhHHhhcccCCCcEEEECCCchhHHHHHHHHHHhhcC-CEEEEEECCcHHHHHHhhcch
Q 003992 390 FKISFYPGKFSKER-RSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGA 467 (781)
Q Consensus 390 ~~i~~yP~~~~~~~-~sil~v~~L~k~I~~~kPDVIhl~~P~~l~~~~~g~~~akk~~-pvV~ivHt~y~~y~~~~~~~~ 467 (781)
+.+..+|....... ........+.+.+++.+||+||++.+... +.. ....+... +.+.+.|... ... .
T Consensus 49 ~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~Dvv~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~----~~~---~ 118 (374)
T 2iw1_A 49 FELIQVPVKSHTNHGRNAEYYAWVQNHLKEHPADRVVGFNKMPG-LDV--YFAADVCYAEKVAQEKGFL----YRL---T 118 (374)
T ss_dssp CEEEECCCCCSSHHHHHHHHHHHHHHHHHHSCCSEEEESSCCTT-CSE--EECCSCCHHHHHHHHCCHH----HHT---S
T ss_pred cEEEEEccCcccchhhHHHHHHHHHHHHhccCCCEEEEecCCCC-cee--eeccccccceeeeecccch----hhh---c
Confidence 01111111000000 00011234677888899999999864321 100 00000000 1111112111 000 0
Q ss_pred hHHHHHHHHHHHHHH-hcCCEEEEcChhhhhc-------C-CCcEEeeCCCCCCCCCCCc----chhhHhhhCcCCCCcE
Q 003992 468 LQAFFVKHINNWVTR-AYCDKVLRLSAATQDL-------P-KSVICNVHGVNPKFLQIGE----KVATDREQGQQAFSKG 534 (781)
Q Consensus 468 ~~~~l~k~l~r~l~r-~~aD~VI~vS~~~k~l-------~-~kivvi~nGVD~~~f~p~~----~~~~r~~~Gi~~~~~~ 534 (781)
.....+..+.+.... ..+|.|+++|+..++. + .++.+++||+|...+.+.. +...+.+++++++.++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (374)
T 2iw1_A 119 SRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNL 198 (374)
T ss_dssp HHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTCEE
T ss_pred HHHHHHHHHHHHHhhccCCcEEEEcCHHHHHHHHHHhCCChhheEEecCCcCHHhcCcccchhHHHHHHHHhCCCCCCeE
Confidence 011122333443332 2599999999976551 1 3578899999987765432 2245677888778899
Q ss_pred EEEEeeccCccCHHHHHHHHHHhhcc-CCCcEEEEEeCCCCHHHHHHHHHhcCCc--EEEcCCCCCHHHHHhcccEEEEc
Q 003992 535 AYFLGKMVWAKGYRELIDLLAKHKND-LDGFKLDVFGNGEDAYEVQSAAKRLDLN--LNFQKGRDHADDSLHGYKVFINP 611 (781)
Q Consensus 535 ILfVGRL~~~KGid~LLeA~~~L~~~-~p~i~LvIVG~Gp~~~~L~~~a~~lgL~--V~FlG~v~~~e~ly~~ADVfVlP 611 (781)
++|+|++.+.||++.+++|+..+.+. .++++|+|+|+|+. +.++++++++++. |.|+|+.++...+|+.||++|+|
T Consensus 199 i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~-~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~p 277 (374)
T 2iw1_A 199 LLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKP-RKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHP 277 (374)
T ss_dssp EEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC-HHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEEEC
T ss_pred EEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEcCCCH-HHHHHHHHHcCCCCcEEECCCcccHHHHHHhcCEEEec
Confidence 99999999999999999999998776 57899999999985 7888898888875 99999988888999999999999
Q ss_pred cCCCCChHHHHHHHHhCCcEEEeCCCCcceee-cCCcccc---CCCHHHHHHHHHHHHhCCCCCCCh-----HHHHcCCH
Q 003992 612 SISDVLCTATAEALAMGKFVICADHPSNEFFR-SFPNCLT---YKTSEDFVARVKEALANDPQPLTP-----EQRYNLSW 682 (781)
Q Consensus 612 S~~EgfGlviLEAMA~G~PVVaSd~gg~g~L~-~~~ngv~---~~D~eeLa~aI~~LL~d~~~r~~m-----~~~~~fSW 682 (781)
|.+|+||++++||||||+|||+++.++...+. .+.+|+. .+|+++++++|.++++|++.+.+| +...+++|
T Consensus 278 s~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~ 357 (374)
T 2iw1_A 278 AYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDL 357 (374)
T ss_dssp CSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSCC
T ss_pred cccCCcccHHHHHHHCCCCEEEecCCCchhhhccCCceEEeCCCCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhhH
Confidence 99999999999999999999999998875433 3455543 359999999999999998877776 34567899
Q ss_pred HHHHHHHHHHhh
Q 003992 683 EAATQRFIEYSE 694 (781)
Q Consensus 683 e~iaerll~~Ye 694 (781)
+..++++.++++
T Consensus 358 ~~~~~~~~~~l~ 369 (374)
T 2iw1_A 358 YSLPEKAADIIT 369 (374)
T ss_dssp SCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999988
No 12
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=100.00 E-value=1.1e-32 Score=295.80 Aligned_cols=303 Identities=13% Similarity=0.013 Sum_probs=232.6
Q ss_pred CCEEEEEeCc-----------cCCC-cCcccccHHHHHHHHHHcCCCEEEEEeccCCCCCCccccccccccCCchhhHHH
Q 003992 309 KRNVAIVTTA-----------SLPW-MTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYM 376 (781)
Q Consensus 309 ~~rIaI~Tta-----------flP~-~~G~av~~l~rA~~Lak~G~~~VtlVvP~l~~~dq~~v~p~i~f~~p~~qe~yi 376 (781)
+|||++++.. |+|. .+|++......+.+|.+.|+ +|+++++....... .
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~-~v~v~~~~~~~~~~-----~------------- 63 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGH-EVFLLGAPGSPAGR-----P------------- 63 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTC-EEEEESCTTSCCCS-----T-------------
T ss_pred ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCC-eEEEEecCCCCCCC-----C-------------
Confidence 5999999998 4664 47777777778999999986 99999764211000 0
Q ss_pred HHHHHHhhCCcccceeeccCCcccccccccCchHhHHhhcccCCCcEEEECCCchhHHHHHHHHHHhhcC-CEEEEEECC
Q 003992 377 RNWLEERVGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTN 455 (781)
Q Consensus 377 r~~l~~rig~~~~~~i~~yP~~~~~~~~sil~v~~L~k~I~~~kPDVIhl~~P~~l~~~~~g~~~akk~~-pvV~ivHt~ 455 (781)
.+.+ ++.. ....+.+++++.+|||||++.+....+ .++..+ | |.++|+.
T Consensus 64 ------------~~~~--~~~~---------~~~~l~~~l~~~~~Dvi~~~~~~~~~~------~~~~~~~p-v~~~h~~ 113 (342)
T 2iuy_A 64 ------------GLTV--VPAG---------EPEEIERWLRTADVDVVHDHSGGVIGP------AGLPPGTA-FISSHHF 113 (342)
T ss_dssp ------------TEEE--CSCC---------SHHHHHHHHHHCCCSEEEECSSSSSCS------TTCCTTCE-EEEEECS
T ss_pred ------------ccee--ccCC---------cHHHHHHHHHhcCCCEEEECCchhhHH------HHhhcCCC-EEEecCC
Confidence 0001 1100 012567788889999999998654321 133445 8 9999987
Q ss_pred cHHHHHHhhcchhHHHHHHHHHHHHHHhcCCEEEEcChhhhhcC---CCcEEeeCCCCCCCCCCCcchhhHhhhCcCCCC
Q 003992 456 YLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLP---KSVICNVHGVNPKFLQIGEKVATDREQGQQAFS 532 (781)
Q Consensus 456 y~~y~~~~~~~~~~~~l~k~l~r~l~r~~aD~VI~vS~~~k~l~---~kivvi~nGVD~~~f~p~~~~~~r~~~Gi~~~~ 532 (781)
+..+ ..+|.++++|+.+++.. .++.+++||+|+..+.+... . .++.
T Consensus 114 ~~~~-----------------------~~~d~ii~~S~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~-------~-~~~~ 162 (342)
T 2iuy_A 114 TTRP-----------------------VNPVGCTYSSRAQRAHCGGGDDAPVIPIPVDPARYRSAAD-------Q-VAKE 162 (342)
T ss_dssp SSBC-----------------------SCCTTEEESCHHHHHHTTCCTTSCBCCCCBCGGGSCCSTT-------C-CCCC
T ss_pred CCCc-----------------------ccceEEEEcCHHHHHHHhcCCceEEEcCCCChhhcCcccc-------c-CCCC
Confidence 5321 02899999999887643 46789999999877765332 1 1245
Q ss_pred cEEEEEeeccCccCHHHHHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHH--HHHhcccEEEE
Q 003992 533 KGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHAD--DSLHGYKVFIN 610 (781)
Q Consensus 533 ~~ILfVGRL~~~KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e--~ly~~ADVfVl 610 (781)
+.++|+||+.+.||++.+++|+..+ +++|+|+|+|+..+.+++++++++-+|.|+|++++.+ ++|+.||++|+
T Consensus 163 ~~i~~vG~~~~~Kg~~~li~a~~~~-----~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv~v~ 237 (342)
T 2iuy_A 163 DFLLFMGRVSPHKGALEAAAFAHAC-----GRRLVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHAVLA 237 (342)
T ss_dssp SCEEEESCCCGGGTHHHHHHHHHHH-----TCCEEEESCCCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSEEEE
T ss_pred CEEEEEeccccccCHHHHHHHHHhc-----CcEEEEEeCcccHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCEEEE
Confidence 6899999999999999999999987 6899999999999999999988874599999999884 99999999999
Q ss_pred ccC----------CCCChHHHHHHHHhCCcEEEeCCCCcceeec---CCccccCC-CHHHHHHHHHHHHhCCCCCCCh--
Q 003992 611 PSI----------SDVLCTATAEALAMGKFVICADHPSNEFFRS---FPNCLTYK-TSEDFVARVKEALANDPQPLTP-- 674 (781)
Q Consensus 611 PS~----------~EgfGlviLEAMA~G~PVVaSd~gg~g~L~~---~~ngv~~~-D~eeLa~aI~~LL~d~~~r~~m-- 674 (781)
||. .|+||++++||||||+|||+++.|+..++.. +.+|+... |+++++++|.++++ ....
T Consensus 238 ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~g~~~~~d~~~l~~~i~~l~~----~~~~~~ 313 (342)
T 2iuy_A 238 MSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGTDFAPDEARRTLAGLPA----SDEVRR 313 (342)
T ss_dssp CCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEECCSSSCCCHHHHHHHHHTSCC----HHHHHH
T ss_pred CCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCceEEcCCCHHHHHHHHHHHHH----HHHHHH
Confidence 999 8999999999999999999999998876543 35665554 99999999999987 1112
Q ss_pred HHHHcCCHHHHHHHHHHHhhhccccccC
Q 003992 675 EQRYNLSWEAATQRFIEYSELNRILNNN 702 (781)
Q Consensus 675 ~~~~~fSWe~iaerll~~Ye~~~vl~~~ 702 (781)
...++|||+.++++++++|+ +++++.
T Consensus 314 ~~~~~~s~~~~~~~~~~~~~--~~~~~~ 339 (342)
T 2iuy_A 314 AAVRLWGHVTIAERYVEQYR--RLLAGA 339 (342)
T ss_dssp HHHHHHBHHHHHHHHHHHHH--HHHTTC
T ss_pred HHHHhcCHHHHHHHHHHHHH--HHHccC
Confidence 33478999999999999999 877543
No 13
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=100.00 E-value=6.9e-32 Score=311.42 Aligned_cols=212 Identities=15% Similarity=0.132 Sum_probs=165.5
Q ss_pred cCCEEEEcChhhhh-c---------------CCCcEEeeCCCCCCCCCCCc--------------------chhhHhhhC
Q 003992 484 YCDKVLRLSAATQD-L---------------PKSVICNVHGVNPKFLQIGE--------------------KVATDREQG 527 (781)
Q Consensus 484 ~aD~VI~vS~~~k~-l---------------~~kivvi~nGVD~~~f~p~~--------------------~~~~r~~~G 527 (781)
+||.|+++|+..++ + ..++.+|+||||.+.++|.. +...+..+|
T Consensus 241 ~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~g 320 (536)
T 3vue_A 241 EADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAG 320 (536)
T ss_dssp HCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTT
T ss_pred hccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcC
Confidence 69999999995433 1 13578999999988776631 112234556
Q ss_pred cC--CCCcEEEEEeeccCccCHHHHHHHHHHhhccCCCcEEEEEeCCCCH--HHHHHHHHhcCCcEEEcCCCCCHH--HH
Q 003992 528 QQ--AFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDA--YEVQSAAKRLDLNLNFQKGRDHAD--DS 601 (781)
Q Consensus 528 i~--~~~~~ILfVGRL~~~KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~~--~~L~~~a~~lgL~V~FlG~v~~~e--~l 601 (781)
++ ++.++|+||||+.++||++.|++|+.++.++ +.+|+|+|.|+.. ..++.....++..|.|++..++.+ .+
T Consensus 321 l~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~--~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 398 (536)
T 3vue_A 321 LPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQE--DVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLI 398 (536)
T ss_dssp SCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTS--SCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHH
T ss_pred CCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhh--CCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHH
Confidence 54 5678999999999999999999999999764 6788999988754 556666666776799998887765 89
Q ss_pred HhcccEEEEccCCCCChHHHHHHHHhCCcEEEeCCCCcceee-cCCcc------------ccCCCHHHHHHHHHHHHh--
Q 003992 602 LHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSNEFFR-SFPNC------------LTYKTSEDFVARVKEALA-- 666 (781)
Q Consensus 602 y~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~g~L~-~~~ng------------v~~~D~eeLa~aI~~LL~-- 666 (781)
|+.||+||+||++|+||++++||||||+|||+|++||..+++ ++.+| +.+.|+++|+++|.+++.
T Consensus 399 ~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~ 478 (536)
T 3vue_A 399 MAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVV 478 (536)
T ss_dssp HHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHT
T ss_pred HHhhheeecccccCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999764332 23333 233789999999999886
Q ss_pred CCCCCCCh---HHHHcCCHHHHHHHHHHHhhhcccc
Q 003992 667 NDPQPLTP---EQRYNLSWEAATQRFIEYSELNRIL 699 (781)
Q Consensus 667 d~~~r~~m---~~~~~fSWe~iaerll~~Ye~~~vl 699 (781)
+.+.+.+| ...++|||++++++|+++|+ ++.
T Consensus 479 ~~~~~~~~~~~am~~~fSW~~~A~~y~~ly~--~L~ 512 (536)
T 3vue_A 479 GTPAYEEMVRNCMNQDLSWKGPAKNWENVLL--GLG 512 (536)
T ss_dssp TSHHHHHHHHHHHHSCCSSHHHHHHHHHHHH--TTC
T ss_pred CcHHHHHHHHHHHHhcCCHHHHHHHHHHHHH--Hhh
Confidence 33333344 23467999999999999999 654
No 14
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=99.98 E-value=2.8e-31 Score=318.49 Aligned_cols=271 Identities=9% Similarity=0.061 Sum_probs=203.5
Q ss_pred CCCcEEEECCCchhHHHHHHHHHHhhcC-CEEEEEECCcHHHHHHhhcchhHH--HHHH-----HHHHHHHHhcCCEEEE
Q 003992 419 KDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGALQA--FFVK-----HINNWVTRAYCDKVLR 490 (781)
Q Consensus 419 ~kPDVIhl~~P~~l~~~~~g~~~akk~~-pvV~ivHt~y~~y~~~~~~~~~~~--~l~k-----~l~r~l~r~~aD~VI~ 490 (781)
.+|||||+|.. ..++.+ ..++++++ |+|.++|+........ ....+.. ..+. ..+++..+ .||.||+
T Consensus 406 ~~PDVIHsH~~-~sglva--~llar~~gvP~V~T~Hsl~~~k~~~-~~~~~~~~~~~y~~~~r~~aE~~~l~-~AD~VIa 480 (816)
T 3s28_A 406 GKPDLIIGNYS-DGNLVA--SLLAHKLGVTQCTIAHALEKTKYPD-SDIYWKKLDDKYHFSCQFTADIFAMN-HTDFIIT 480 (816)
T ss_dssp SCCSEEEEEHH-HHHHHH--HHHHHHHTCCEEEECSCCHHHHSTT-TTTTHHHHHHHHCHHHHHHHHHHHHH-HSSEEEE
T ss_pred CCCeEEEeCCc-hHHHHH--HHHHHHcCCCEEEEEeccccccccc-ccchhhhHHHHHHHHHHHHHHHHHHH-hCCEEEE
Confidence 47999999842 223333 56677778 9999999864321100 0000001 1111 12333444 6999999
Q ss_pred cChhhhh--------c--------CC-------------CcEEeeCCCCCCCCCCCcchh-------------------h
Q 003992 491 LSAATQD--------L--------PK-------------SVICNVHGVNPKFLQIGEKVA-------------------T 522 (781)
Q Consensus 491 vS~~~k~--------l--------~~-------------kivvi~nGVD~~~f~p~~~~~-------------------~ 522 (781)
+|...++ + +. ++.+|+||||.+.|.+..... .
T Consensus 481 ~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~ 560 (816)
T 3s28_A 481 STFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVEN 560 (816)
T ss_dssp SCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCB
T ss_pred CCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhH
Confidence 9986554 1 11 788999999988776643221 1
Q ss_pred HhhhCc--CCCCcEEEEEeeccCccCHHHHHHHHHHhhccCCCcEEEEEeCCC-----------CHHHHHHHHHhcCCc-
Q 003992 523 DREQGQ--QAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGE-----------DAYEVQSAAKRLDLN- 588 (781)
Q Consensus 523 r~~~Gi--~~~~~~ILfVGRL~~~KGid~LLeA~~~L~~~~p~i~LvIVG~Gp-----------~~~~L~~~a~~lgL~- 588 (781)
++.+|+ .++.++|+|+||+.+.||++.|++|+.++.+..++++|+|+|+|+ ..+.++++++++++.
T Consensus 561 r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~ 640 (816)
T 3s28_A 561 KEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNG 640 (816)
T ss_dssp TTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBB
T ss_pred HHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCC
Confidence 233454 567889999999999999999999999998877899999999999 457888999999986
Q ss_pred -EEEcCCCCC----HH--HHHh-cccEEEEccCCCCChHHHHHHHHhCCcEEEeCCCCcceee-cCCcccc--CCCHHHH
Q 003992 589 -LNFQKGRDH----AD--DSLH-GYKVFINPSISDVLCTATAEALAMGKFVICADHPSNEFFR-SFPNCLT--YKTSEDF 657 (781)
Q Consensus 589 -V~FlG~v~~----~e--~ly~-~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~g~L~-~~~ngv~--~~D~eeL 657 (781)
|.|+|++++ .+ .+|+ .+|+||+||.+|+||++++||||||+|||+|+.|+...++ ++.+|+. .+|++++
T Consensus 641 ~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~L 720 (816)
T 3s28_A 641 QFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQA 720 (816)
T ss_dssp BEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHHH
T ss_pred cEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCCChHHHHccCCcEEEeCCCCHHHH
Confidence 999998875 22 5566 6899999999999999999999999999999999886654 4556644 4799999
Q ss_pred HHHHHHHH----hCCCCCCCh-----H-HHHcCCHHHHHHHHHHHhh
Q 003992 658 VARVKEAL----ANDPQPLTP-----E-QRYNLSWEAATQRFIEYSE 694 (781)
Q Consensus 658 a~aI~~LL----~d~~~r~~m-----~-~~~~fSWe~iaerll~~Ye 694 (781)
+++|.+++ .|++.+.+| + ..+.|||+.++++++++|+
T Consensus 721 A~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~ 767 (816)
T 3s28_A 721 ADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTG 767 (816)
T ss_dssp HHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99997776 888877777 2 2378999999999999998
No 15
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.96 E-value=5.2e-30 Score=286.39 Aligned_cols=334 Identities=13% Similarity=0.088 Sum_probs=207.0
Q ss_pred CCCCCEEEEEeCccCCC-cCcccccHHHHHHHHHHcCCCEEEEEeccCCCCCCccccccccccCCchhhHHHHHHHHHhh
Q 003992 306 SDKKRNVAIVTTASLPW-MTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERV 384 (781)
Q Consensus 306 ~~~~~rIaI~TtaflP~-~~G~av~~l~rA~~Lak~G~~~VtlVvP~l~~~dq~~v~p~i~f~~p~~qe~yir~~l~~ri 384 (781)
..++|||++||.+|+|. ..|+.......|.+|+++|| +|+++++.... +. .. + .++
T Consensus 43 ~~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~Gh-eV~Vvt~~~~~-~~---------------~~-~-----~~~ 99 (413)
T 2x0d_A 43 SIKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKF-KKRIILTDATP-NP---------------KD-L-----QSF 99 (413)
T ss_dssp CCCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTC-EEEEEESSCCC-CH---------------HH-H-----GGG
T ss_pred CCCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCC-ceEEEEecCCC-Ch---------------HH-H-----Hhh
Confidence 35679999999999997 35554445667889999996 99999874210 00 00 0 000
Q ss_pred CCcccceeeccCCcccccccccCchH-hHHhhcccCCCcEEEECCCchhHHHHHHHHHH----hh---cC-CEEEEEECC
Q 003992 385 GFKADFKISFYPGKFSKERRSIIPAG-DTSQFIPSKDADIAILEEPEHLNWYHHGKRWT----DK---FN-HVVGVVHTN 455 (781)
Q Consensus 385 g~~~~~~i~~yP~~~~~~~~sil~v~-~L~k~I~~~kPDVIhl~~P~~l~~~~~g~~~a----kk---~~-pvV~ivHt~ 455 (781)
. .....+++.. ......+.... .+...+...+||+||++... ..... .... .. .. +.+..+|+.
T Consensus 100 --~-~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~Dvv~a~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~ 172 (413)
T 2x0d_A 100 --K-SFKYVMPEED-KDFALQIVPFNDRYNRTIPVAKHDIFIATAWW-TAYAA--QRIVSWQSDTYGIPPNKILYIIQDF 172 (413)
T ss_dssp --T-TSEECCTTCC-CCCSEEEEECSCCTTCCEEECTTEEEEECSHH-HHHHH--HHHHHHHHHHHTCCCCCEEEEECSC
T ss_pred --h-ccceeeccCC-ccccceeeeccccccccccCCCCCEEEEehHH-HHHHH--HHhhhhhhhhcccccCcEEEEEeec
Confidence 0 0000000000 00000000000 01122333579999987521 11111 1111 11 13 677777775
Q ss_pred cHHHHHHhhcchhHHHHHHHHHHHHHHhcCC--EEEEcChhhhhc------C-CCcEEeeCCCCCCCCCCCcchhhHhhh
Q 003992 456 YLEYIKREKNGALQAFFVKHINNWVTRAYCD--KVLRLSAATQDL------P-KSVICNVHGVNPKFLQIGEKVATDREQ 526 (781)
Q Consensus 456 y~~y~~~~~~~~~~~~l~k~l~r~l~r~~aD--~VI~vS~~~k~l------~-~kivvi~nGVD~~~f~p~~~~~~r~~~ 526 (781)
...+. .... ...+.+...+ .++ .+|++|+.+++. . .+..+++||+|.+.+.+. ..
T Consensus 173 ~~~~~---~~~~-----~~~~~~~~~~-~~~~~~vi~~S~~~~~~l~~~g~~~~~~~~i~~g~d~~~~~~~-------~~ 236 (413)
T 2x0d_A 173 EPGFY---QWSS-----QYVLAESTYK-YRGPQIAVFNSELLKQYFNNKGYNFTDEYFFQPKINTTLKNYI-------ND 236 (413)
T ss_dssp GGGGS---CSSH-----HHHHHHHTTS-CCSCEEEEEESHHHHHHHHHHTCCCSEEEEECCCCCHHHHTTT-------TS
T ss_pred hhhcC---ccCh-----HHHHHHHHhc-cCCceEEEEcCHHHHHHHHHcCCCCCceEEeCCCcCchhhccc-------cc
Confidence 43211 1100 1112222222 233 689999977652 2 245778899986544321 01
Q ss_pred CcCCCCcEEEEEeec-cCccCHHHHHHHHHHhhccCCC---cEEEEEeCCCCHHHHHHHHHhcCCc--EEEcCCCCCHH-
Q 003992 527 GQQAFSKGAYFLGKM-VWAKGYRELIDLLAKHKNDLDG---FKLDVFGNGEDAYEVQSAAKRLDLN--LNFQKGRDHAD- 599 (781)
Q Consensus 527 Gi~~~~~~ILfVGRL-~~~KGid~LLeA~~~L~~~~p~---i~LvIVG~Gp~~~~L~~~a~~lgL~--V~FlG~v~~~e- 599 (781)
..+..+.++|+||+ .+.||++.|++|+..+.+..|+ ++|+|+|+|+.. .++++. |.|+|+++..+
T Consensus 237 -~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~-------~~l~~~~~v~f~G~~~~~~l 308 (413)
T 2x0d_A 237 -KRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKD-------IALGKGIHLNSLGKLTLEDY 308 (413)
T ss_dssp -CCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCC-------EEEETTEEEEEEESCCHHHH
T ss_pred -ccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchh-------hhcCCcCcEEEcCCCCHHHH
Confidence 12245678999997 6889999999999999887775 899999999875 234443 99999998776
Q ss_pred -HHHhcccEEEEccCCCCChHHHHHHHHhCCcEEEeCCCCcceeecCCcc--ccCCCHHHHHHHHHHHHhCCCCCCCh--
Q 003992 600 -DSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSNEFFRSFPNC--LTYKTSEDFVARVKEALANDPQPLTP-- 674 (781)
Q Consensus 600 -~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~g~L~~~~ng--v~~~D~eeLa~aI~~LL~d~~~r~~m-- 674 (781)
++|+.||+||+||.+|+||++++||||||+|||+++.|..+.+.++.+| +..+|+++|+++|.++++|++.+.+.
T Consensus 309 ~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~~~~~~~~~ 388 (413)
T 2x0d_A 309 ADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVITNKYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFNNRDVDKK 388 (413)
T ss_dssp HHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEEECBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHTC-------
T ss_pred HHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEEeCCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCHHHHHHhHH
Confidence 9999999999999999999999999999999999765543444345566 34599999999999999998877652
Q ss_pred HHHHcCCHHHHHHHHHHHhh
Q 003992 675 EQRYNLSWEAATQRFIEYSE 694 (781)
Q Consensus 675 ~~~~~fSWe~iaerll~~Ye 694 (781)
+.+..|+|+.++++ ++.|.
T Consensus 389 ~~~~~~~W~~~~~~-~~~~~ 407 (413)
T 2x0d_A 389 ESSNMMFYINEFNE-FSFIK 407 (413)
T ss_dssp CCBSCGGGCCCC----TTHH
T ss_pred HHHHhCCHHHHHHH-HHHHH
Confidence 22357999999887 55665
No 16
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.95 E-value=3.7e-28 Score=270.06 Aligned_cols=236 Identities=17% Similarity=0.197 Sum_probs=171.8
Q ss_pred CCcEEEECCCchhHHHHHHHHHHhhcC-CEEEEEECCcH-HHHHHhhcchhHHHHHHHHHHHHHHhcCCEEEEcChhhhh
Q 003992 420 DADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYL-EYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQD 497 (781)
Q Consensus 420 kPDVIhl~~P~~l~~~~~g~~~akk~~-pvV~ivHt~y~-~y~~~~~~~~~~~~l~k~l~r~l~r~~aD~VI~vS~~~k~ 497 (781)
++||||...... ..+ ..+++..+ |++.++|.... ... .. ....+.+.++..+ .+|.||++|+.+++
T Consensus 124 ~~DvIh~~~~~~-~~~---~~~~~~~~~p~v~~~h~~~~~~~~---~~----~~~~~~~~~~~~~-~ad~vi~~S~~~~~ 191 (406)
T 2hy7_A 124 ESDVIVFESGIA-VAF---IELAKRVNPAAKLVYRASDGLSTI---NV----ASYIEREFDRVAP-TLDVIALVSPAMAA 191 (406)
T ss_dssp HCSEEEEESSGG-GGG---HHHHHHHCTTSEEEEEESSCHHHH---TC----CHHHHHHHHHHGG-GCSEEEESCGGGGG
T ss_pred CCCEEEECCchH-HHH---HHHHHHhCCCEEEEEeccchhhcc---cc----cHHHHHHHHHHHH-hCCEEEEcCHHHHH
Confidence 689999443221 111 13445556 88999996432 111 11 1122233344444 69999999998877
Q ss_pred cCC---CcEEeeCCCCCCCCCCCcchhhHhhhCcCCCCcEEEEEeeccCccCHHHHHHHHHHhhccCCCcEEEEEeCCCC
Q 003992 498 LPK---SVICNVHGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGED 574 (781)
Q Consensus 498 l~~---kivvi~nGVD~~~f~p~~~~~~r~~~Gi~~~~~~ILfVGRL~~~KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~ 574 (781)
... ++.+++||||.+.|.+.... . ....+.++|+||+.+.||+ + ..+.+..|+++|+|+|+|+
T Consensus 192 ~~~~~~~i~vipngvd~~~f~~~~~~------~-~~~~~~i~~vGrl~~~Kg~---~---~~l~~~~~~~~l~ivG~g~- 257 (406)
T 2hy7_A 192 EVVSRDNVFHVGHGVDHNLDQLGDPS------P-YAEGIHAVAVGSMLFDPEF---F---VVASKAFPQVTFHVIGSGM- 257 (406)
T ss_dssp GCSCSTTEEECCCCBCTTHHHHHCSC------S-CCSSEEEEEECCTTBCHHH---H---HHHHHHCTTEEEEEESCSS-
T ss_pred HHHhcCCEEEEcCCcChHhcCccccc------c-cCCCcEEEEEeccccccCH---H---HHHHHhCCCeEEEEEeCch-
Confidence 432 67899999998776432211 0 1123789999999999999 3 3334456899999999998
Q ss_pred HHHHHHHHHhcCCc--EEEcCCCCCHH--HHHhcccEEEEccCCCCChHHHHHHH-------HhCCcEEEeCCCCcceee
Q 003992 575 AYEVQSAAKRLDLN--LNFQKGRDHAD--DSLHGYKVFINPSISDVLCTATAEAL-------AMGKFVICADHPSNEFFR 643 (781)
Q Consensus 575 ~~~L~~~a~~lgL~--V~FlG~v~~~e--~ly~~ADVfVlPS~~EgfGlviLEAM-------A~G~PVVaSd~gg~g~L~ 643 (781)
++++++. |.|+|++++.+ .+|+.||+||+||..|+||++++||| |||+|||+|+. +.
T Consensus 258 -------~~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~-----v~ 325 (406)
T 2hy7_A 258 -------GRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA-----VV 325 (406)
T ss_dssp -------CCCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG-----GT
T ss_pred -------HHhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh-----cc
Confidence 4555654 99999998765 99999999999999999999999999 99999999987 33
Q ss_pred cCCcc---ccCCCHHHHHHHHHHHHhCCCCCCChHHHHcCCHHHHHHHHHHH--hhhcccc
Q 003992 644 SFPNC---LTYKTSEDFVARVKEALANDPQPLTPEQRYNLSWEAATQRFIEY--SELNRIL 699 (781)
Q Consensus 644 ~~~ng---v~~~D~eeLa~aI~~LL~d~~~r~~m~~~~~fSWe~iaerll~~--Ye~~~vl 699 (781)
.+.+| +..+|+++|+++|.++++|++. ...+.|+|+.++++++++ |+ ++.
T Consensus 326 ~~~~G~l~v~~~d~~~la~ai~~ll~~~~~----~~~~~~sw~~~a~~~~~~~~y~--~~~ 380 (406)
T 2hy7_A 326 GPYKSRFGYTPGNADSVIAAITQALEAPRV----RYRQCLNWSDTTDRVLDPRAYP--ETR 380 (406)
T ss_dssp CSCSSEEEECTTCHHHHHHHHHHHHHCCCC----CCSCCCBHHHHHHHHHCGGGSG--GGB
T ss_pred cCcceEEEeCCCCHHHHHHHHHHHHhCcch----hhhhcCCHHHHHHHHHHhhccc--ccC
Confidence 33334 3458999999999999999872 335789999999999999 98 544
No 17
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.95 E-value=1.2e-27 Score=274.37 Aligned_cols=330 Identities=11% Similarity=0.013 Sum_probs=233.6
Q ss_pred CCCCCEEEEEeCccCCCcCcccccHHHHHHH--HHHcCCCEEEEEeccCCCCCCccccccccccCCchhhHHHHHHHHHh
Q 003992 306 SDKKRNVAIVTTASLPWMTGTAVNPLFRAAY--LAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEER 383 (781)
Q Consensus 306 ~~~~~rIaI~TtaflP~~~G~av~~l~rA~~--Lak~G~~~VtlVvP~l~~~dq~~v~p~i~f~~p~~qe~yir~~l~~r 383 (781)
..++|||+++++.+.+ +|++......+.+ +.+.| ++|+++++.-.. . .. + ...+..
T Consensus 202 ~~~~~rI~~~~~~~~~--~g~~~~~~~l~~~L~~~~~~-~~v~~~~~~~~~--~------------~~---~-~~~~~~- 259 (568)
T 2vsy_A 202 SKGPLRVGFVSNGFGA--HPTGLLTVALFEALQRRQPD-LQMHLFATSGDD--G------------ST---L-RTRLAQ- 259 (568)
T ss_dssp SSSCEEEEEEESCSSS--SHHHHHHHHHHHHHHHHCTT-EEEEEEESSCCC--S------------CH---H-HHHHHH-
T ss_pred CCCCeEEEEECccccc--ChHHHHHHHHHhhccCCccc-EEEEEEECCCCC--c------------cH---H-HHHHHh-
Confidence 3567999999998865 3655444556777 56666 499988753100 0 00 0 111111
Q ss_pred hCCcccceeeccCCcccccccccCchHhHHhhcccCCCcEEEECCCchhHHHHHHHHHHhhcCCEEEEEECCcHHHHHHh
Q 003992 384 VGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKRE 463 (781)
Q Consensus 384 ig~~~~~~i~~yP~~~~~~~~sil~v~~L~k~I~~~kPDVIhl~~P~~l~~~~~g~~~akk~~pvV~ivHt~y~~y~~~~ 463 (781)
.+ .+...+. .....+.+.|++.+|||||.+.....+... ..++.+..|++.++|......
T Consensus 260 ~~-----~~~~~~~---------~~~~~l~~~i~~~~~Div~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---- 319 (568)
T 2vsy_A 260 AS-----TLHDVTA---------LGHLATAKHIRHHGIDLLFDLRGWGGGGRP--EVFALRPAPVQVNWLAYPGTS---- 319 (568)
T ss_dssp TS-----EEEECTT---------CCHHHHHHHHHHTTCSEEEECSSCTTCSSC--HHHHTCCSSEEEEESSSSSCC----
T ss_pred cC-----eEEECCC---------CCHHHHHHHHHhCCCCEEEECCCCCCcchH--HHHhcCCCceeEeeecCCccc----
Confidence 11 1111110 123567888999999999986543211111 122333338877777532100
Q ss_pred hcchhHHHHHHHHHHHHHHhcCCEEEEcChhhhhcCCCcEEeeCCCCCCCCC-CCcchhhHhhhCcCCCCcEEEEEeecc
Q 003992 464 KNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPKSVICNVHGVNPKFLQ-IGEKVATDREQGQQAFSKGAYFLGKMV 542 (781)
Q Consensus 464 ~~~~~~~~l~k~l~r~l~r~~aD~VI~vS~~~k~l~~kivvi~nGVD~~~f~-p~~~~~~r~~~Gi~~~~~~ILfVGRL~ 542 (781)
+. .++....+|.++++|+..+++..++.+++|.+.+.... .......+.++|++++ ..++++|++.
T Consensus 320 ~~------------~~~~~~~~d~~i~~s~~~~~~~~~i~~ipn~~~~~~~~~~~~~~~~r~~~~~~~~-~~v~~~g~~~ 386 (568)
T 2vsy_A 320 GA------------PWMDYVLGDAFALPPALEPFYSEHVLRLQGAFQPSDTSRVVAEPPSRTQCGLPEQ-GVVLCCFNNS 386 (568)
T ss_dssp CC------------TTCCEEEECTTTSCTTTGGGCSSEEEECSSCSCCCCTTCCCCCCCCTGGGTCCTT-SCEEEECCCG
T ss_pred CC------------CCceEEEECCCcCCcccccCCcceeEcCCCcCCCCCCCCCCCCCCCccccCCCCC-CEEEEeCCcc
Confidence 00 00111147889999998887777788888866543211 1122334667777654 4567999999
Q ss_pred CccCHHHHHHHHHHhhccCCCcEEEEEe-CCCCHHHHHHHHHhcCCc---EEEcCCCCCHH--HHHhcccEEEEccCCCC
Q 003992 543 WAKGYRELIDLLAKHKNDLDGFKLDVFG-NGEDAYEVQSAAKRLDLN---LNFQKGRDHAD--DSLHGYKVFINPSISDV 616 (781)
Q Consensus 543 ~~KGid~LLeA~~~L~~~~p~i~LvIVG-~Gp~~~~L~~~a~~lgL~---V~FlG~v~~~e--~ly~~ADVfVlPS~~Eg 616 (781)
+ ||++.+++++.++.++.|+++|+|+| +|+..+.+++.++++|+. |.|+|++++.+ .+|+.+|+||+||.+ |
T Consensus 387 ~-K~~~~li~a~~~l~~~~~~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~-~ 464 (568)
T 2vsy_A 387 Y-KLNPQSMARMLAVLREVPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDTHPY-N 464 (568)
T ss_dssp G-GCCHHHHHHHHHHHHHCTTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECCSSS-C
T ss_pred c-cCCHHHHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeCCCC-C
Confidence 9 99999999999998888999999999 999999999999999874 99999998554 899999999999999 9
Q ss_pred ChHHHHHHHHhCCcEEE-------eCCC-------CcceeecCCccccCCCHHHHHHHHHHHHhCCCCCCCh-----HHH
Q 003992 617 LCTATAEALAMGKFVIC-------ADHP-------SNEFFRSFPNCLTYKTSEDFVARVKEALANDPQPLTP-----EQR 677 (781)
Q Consensus 617 fGlviLEAMA~G~PVVa-------Sd~g-------g~g~L~~~~ngv~~~D~eeLa~aI~~LL~d~~~r~~m-----~~~ 677 (781)
||++++||||||+|||+ |++| |.+.+ ..+|+++++++|.++++|++.+.+| +..
T Consensus 465 ~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~-------v~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 537 (568)
T 2vsy_A 465 AHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEM-------NVADDAAFVAKAVALASDPAALTALHARVDVLR 537 (568)
T ss_dssp CSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGG-------BCSSHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhh-------hcCCHHHHHHHHHHHhcCHHHHHHHHHHHHHhh
Confidence 99999999999999999 9888 77664 2249999999999999999877776 223
Q ss_pred ---HcCCHHHHHHHHHHHhhhcccccc
Q 003992 678 ---YNLSWEAATQRFIEYSELNRILNN 701 (781)
Q Consensus 678 ---~~fSWe~iaerll~~Ye~~~vl~~ 701 (781)
..|+|+.++++++++|+ +++++
T Consensus 538 ~~~~~f~~~~~~~~~~~~y~--~~~~~ 562 (568)
T 2vsy_A 538 RASGVFHMDGFADDFGALLQ--ALARR 562 (568)
T ss_dssp HHSSTTCHHHHHHHHHHHHH--HHHHT
T ss_pred hcCCCCCHHHHHHHHHHHHH--HHHHH
Confidence 67999999999999999 77654
No 18
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.95 E-value=5.8e-27 Score=252.60 Aligned_cols=249 Identities=10% Similarity=0.008 Sum_probs=187.8
Q ss_pred HhHHhhcccCCCcEEEECCCchhHHHHHHHHHHhhcC-CEEEEEECCcHHHHHHhhcchhHHHHHHHHHHHHHHhcCCEE
Q 003992 410 GDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKV 488 (781)
Q Consensus 410 ~~L~k~I~~~kPDVIhl~~P~~l~~~~~g~~~akk~~-pvV~ivHt~y~~y~~~~~~~~~~~~l~k~l~r~l~r~~aD~V 488 (781)
..+.+.+++.+||+||++.+... +.. ...++..+ |++.+.|+.+... ..+++.+ ++|.+
T Consensus 86 ~~l~~~l~~~~pDvv~~~~~~~~-~~~--~~~~~~~~~p~v~~~~~~~~~~----------------~~~~~~~-~~d~v 145 (364)
T 1f0k_A 86 RQARAIMKAYKPDVVLGMGGYVS-GPG--GLAAWSLGIPVVLHEQNGIAGL----------------TNKWLAK-IATKV 145 (364)
T ss_dssp HHHHHHHHHHCCSEEEECSSTTH-HHH--HHHHHHTTCCEEEEECSSSCCH----------------HHHHHTT-TCSEE
T ss_pred HHHHHHHHhcCCCEEEEeCCcCc-hHH--HHHHHHcCCCEEEEecCCCCcH----------------HHHHHHH-hCCEE
Confidence 45677888899999999976532 222 34455566 9998888754221 1234444 69999
Q ss_pred EEcChhhhhcCCCcEEeeCCCCCCCCCCCcchhhHhhhCcCCCCcEEE-EEeeccCccCHHHHHHHHHHhhccCCCcE-E
Q 003992 489 LRLSAATQDLPKSVICNVHGVNPKFLQIGEKVATDREQGQQAFSKGAY-FLGKMVWAKGYRELIDLLAKHKNDLDGFK-L 566 (781)
Q Consensus 489 I~vS~~~k~l~~kivvi~nGVD~~~f~p~~~~~~r~~~Gi~~~~~~IL-fVGRL~~~KGid~LLeA~~~L~~~~p~i~-L 566 (781)
++.++.. ++ ++.+++||+++.++.+.. .+..+++.++.+.++ +.|++.+.||++.+++|+..+.+ +++ +
T Consensus 146 ~~~~~~~--~~-~~~~i~n~v~~~~~~~~~---~~~~~~~~~~~~~il~~~g~~~~~k~~~~li~a~~~l~~---~~~~l 216 (364)
T 1f0k_A 146 MQAFPGA--FP-NAEVVGNPVRTDVLALPL---PQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGD---SVTIW 216 (364)
T ss_dssp EESSTTS--SS-SCEECCCCCCHHHHTSCC---HHHHHTTCCSSEEEEEECTTTCCHHHHHHHHHHHHHHGG---GEEEE
T ss_pred EecChhh--cC-CceEeCCccchhhcccch---hhhhcccCCCCcEEEEEcCchHhHHHHHHHHHHHHHhcC---CcEEE
Confidence 9988765 33 677899999976664421 234566655666555 55689999999999999999865 677 5
Q ss_pred EEEeCCCCHHHHHHHHHhcCCc-EEEcCCCCCHHHHHhcccEEEEccCCCCChHHHHHHHHhCCcEEEeCCCCcc-----
Q 003992 567 DVFGNGEDAYEVQSAAKRLDLN-LNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSNE----- 640 (781)
Q Consensus 567 vIVG~Gp~~~~L~~~a~~lgL~-V~FlG~v~~~e~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~g----- 640 (781)
+++|+|+ .+.+++.++++++. |.|+|++++...+|+.||+||+||. |++++||||||+|||+++.++..
T Consensus 217 ~i~G~~~-~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~sg----~~~~~EAma~G~Pvi~~~~~g~~~~q~~ 291 (364)
T 1f0k_A 217 HQSGKGS-QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSG----ALTVSEIAAAGLPALFVPFQHKDRQQYW 291 (364)
T ss_dssp EECCTTC-HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSEEEECCC----HHHHHHHHHHTCCEEECCCCCTTCHHHH
T ss_pred EEcCCch-HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCEEEECCc----hHHHHHHHHhCCCEEEeeCCCCchhHHH
Confidence 7789888 57888888888865 9999999888899999999999993 99999999999999999998642
Q ss_pred ---eeecCCcccc--CCC--HHHHHHHHHHHHhCCCCCCCh-----HHHHcCCHHHHHHHHHHHhh
Q 003992 641 ---FFRSFPNCLT--YKT--SEDFVARVKEALANDPQPLTP-----EQRYNLSWEAATQRFIEYSE 694 (781)
Q Consensus 641 ---~L~~~~ngv~--~~D--~eeLa~aI~~LL~d~~~r~~m-----~~~~~fSWe~iaerll~~Ye 694 (781)
++.....|+. .+| +++++++|.++ |++.+.+| +....|+|+.++++++++|+
T Consensus 292 ~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 355 (364)
T 1f0k_A 292 NALPLEKAGAAKIIEQPQLSVDAVANTLAGW--SRETLLTMAERARAASIPDATERVANEVSRVAR 355 (364)
T ss_dssp HHHHHHHTTSEEECCGGGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCcEEEeccccCCHHHHHHHHHhc--CHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHH
Confidence 3444333533 356 99999999998 77666666 22357999999999999998
No 19
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.93 E-value=3.1e-26 Score=247.53 Aligned_cols=266 Identities=8% Similarity=-0.022 Sum_probs=180.9
Q ss_pred HhHHhhcccCCCcEEEECCCchhHHHHHHHHHHhhcC-CEEEEEECCcHHHHHHhhcchhHHHHHHHHHHHHHHhcCCEE
Q 003992 410 GDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKV 488 (781)
Q Consensus 410 ~~L~k~I~~~kPDVIhl~~P~~l~~~~~g~~~akk~~-pvV~ivHt~y~~y~~~~~~~~~~~~l~k~l~r~l~r~~aD~V 488 (781)
..+.+++++++||+||++.+...++.. ...++..+ |++.+.|... .+. .+ ..+.. ....+++.+ .+|.+
T Consensus 85 ~~l~~~l~~~~pDvv~~~~~~~~~~~~--~~~~~~~~ip~v~~~~~~~-~~~-~~--~~~~~---~~~~~~~~~-~~d~i 154 (375)
T 3beo_A 85 EGLDKVMKEAKPDIVLVHGDTTTTFIA--SLAAFYNQIPVGHVEAGLR-TWD-KY--SPYPE---EMNRQLTGV-MADLH 154 (375)
T ss_dssp HHHHHHHHHHCCSEEEEETTSHHHHHH--HHHHHHTTCCEEEESCCCC-CSC-TT--SSTTH---HHHHHHHHH-HCSEE
T ss_pred HHHHHHHHHhCCCEEEEeCCchHHHHH--HHHHHHHCCCEEEEecccc-ccc-cc--CCChh---HhhhhHHhh-hhhee
Confidence 357788889999999998764444332 34455666 8886555431 110 00 00111 112222333 59999
Q ss_pred EEcChhhhhc------C-CCcEEeeCC-CCCCCCCCC--cchhhHhhhCcCCCCcEEEEEeeccCc-cCHHHHHHHHHHh
Q 003992 489 LRLSAATQDL------P-KSVICNVHG-VNPKFLQIG--EKVATDREQGQQAFSKGAYFLGKMVWA-KGYRELIDLLAKH 557 (781)
Q Consensus 489 I~vS~~~k~l------~-~kivvi~nG-VD~~~f~p~--~~~~~r~~~Gi~~~~~~ILfVGRL~~~-KGid~LLeA~~~L 557 (781)
+++|+..++. + .++.+++|| +|...+.+. .....+.++ .+...+++++||+.+. ||++.|++|+.++
T Consensus 155 i~~s~~~~~~~~~~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~--~~~~~vl~~~gr~~~~~K~~~~li~a~~~l 232 (375)
T 3beo_A 155 FSPTAKSATNLQKENKDESRIFITGNTAIDALKTTVKETYSHPVLEKL--GNNRLVLMTAHRRENLGEPMRNMFRAIKRL 232 (375)
T ss_dssp EESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHCCSSCCCHHHHTT--TTSEEEEEECCCGGGTTHHHHHHHHHHHHH
T ss_pred eCCCHHHHHHHHHcCCCcccEEEECChhHhhhhhhhhhhhhHHHHHhc--cCCCeEEEEecccccchhHHHHHHHHHHHH
Confidence 9999977652 1 257788999 775433221 112223333 2234466799999875 9999999999999
Q ss_pred hccCCCcEEEEEeCCCCHHHHHHHHHhc-C--CcEEEcCCCCCHH--HHHhcccEEEEccCCCCChHHHHHHHHhCCcEE
Q 003992 558 KNDLDGFKLDVFGNGEDAYEVQSAAKRL-D--LNLNFQKGRDHAD--DSLHGYKVFINPSISDVLCTATAEALAMGKFVI 632 (781)
Q Consensus 558 ~~~~p~i~LvIVG~Gp~~~~L~~~a~~l-g--L~V~FlG~v~~~e--~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PVV 632 (781)
.++.|+++++ +|.|+.. .+++.++++ + -+|.|+|+....+ .+|+.||+||+|| |.+++||||||+|||
T Consensus 233 ~~~~~~~~~i-~~~g~~~-~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~s-----g~~~lEA~a~G~Pvi 305 (375)
T 3beo_A 233 VDKHEDVQVV-YPVHMNP-VVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYLMLTDS-----GGVQEEAPSLGVPVL 305 (375)
T ss_dssp HHHCTTEEEE-EECCSCH-HHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSEEEECC-----HHHHHHHHHHTCCEE
T ss_pred HhhCCCeEEE-EeCCCCH-HHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcEEEECC-----CChHHHHHhcCCCEE
Confidence 8878899854 5777753 333333332 2 2499988877555 8999999999999 778999999999999
Q ss_pred EeCC-CCcceeecCCccccC-CCHHHHHHHHHHHHhCCCCCCCh-----HHHHcCCHHHHHHHHHHHhh
Q 003992 633 CADH-PSNEFFRSFPNCLTY-KTSEDFVARVKEALANDPQPLTP-----EQRYNLSWEAATQRFIEYSE 694 (781)
Q Consensus 633 aSd~-gg~g~L~~~~ngv~~-~D~eeLa~aI~~LL~d~~~r~~m-----~~~~~fSWe~iaerll~~Ye 694 (781)
+++. ++..++....+|+.. .|+++++++|.++++|++.+.+| +....|+|+.+++.+.+.++
T Consensus 306 ~~~~~~~~~e~v~~g~g~~v~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 306 VLRDTTERPEGIEAGTLKLAGTDEETIFSLADELLSDKEAHDKMSKASNPYGDGRASERIVEAILKHFN 374 (375)
T ss_dssp ECSSCCSCHHHHHTTSEEECCSCHHHHHHHHHHHHHCHHHHHHHCCCCCTTCCSCHHHHHHHHHHHHTT
T ss_pred EecCCCCCceeecCCceEEcCCCHHHHHHHHHHHHhChHhHhhhhhcCCCCCCCcHHHHHHHHHHHHhh
Confidence 9964 777655544466543 69999999999999998766555 23357999999999988775
No 20
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.92 E-value=9.1e-26 Score=244.99 Aligned_cols=273 Identities=8% Similarity=-0.057 Sum_probs=183.9
Q ss_pred HhHHhhcccCCCcEEEECCCchhHHHHHHHHHHhhcC-CEEEEEECCcHHHHHHhhcchhHHHHHHHHHHHHHHhcCCEE
Q 003992 410 GDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKV 488 (781)
Q Consensus 410 ~~L~k~I~~~kPDVIhl~~P~~l~~~~~g~~~akk~~-pvV~ivHt~y~~y~~~~~~~~~~~~l~k~l~r~l~r~~aD~V 488 (781)
..+.+++++.+||+||++.+....+.. ...++..+ |++.+.|.... +.. + . .. .....+.+....+|.+
T Consensus 76 ~~l~~~l~~~~pDvv~~~~~~~~~~~~--~~~a~~~~ip~v~~~~~~~~-~~~-~-~-~~----~~~~~~~~~~~~~d~i 145 (384)
T 1vgv_A 76 EGLKPILAEFKPDVVLVHGDTTTTLAT--SLAAFYQRIPVGHVEAGLRT-GDL-Y-S-PW----PEEANRTLTGHLAMYH 145 (384)
T ss_dssp HHHHHHHHHHCCSEEEEETTCHHHHHH--HHHHHTTTCCEEEESCCCCC-SCT-T-S-ST----THHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHhCCCEEEEeCCchHHHHH--HHHHHHHCCCEEEEeccccc-ccc-c-C-CC----chHhhHHHHHhhccEE
Confidence 457888899999999998763334433 34455556 88877665421 100 0 0 00 0112222222269999
Q ss_pred EEcChhhhhc-------CCCcEEeeCCC-CCCCCCCCc-------chhhHhhhC-cCCCC-cEEEEEeeccCc-cCHHHH
Q 003992 489 LRLSAATQDL-------PKSVICNVHGV-NPKFLQIGE-------KVATDREQG-QQAFS-KGAYFLGKMVWA-KGYREL 550 (781)
Q Consensus 489 I~vS~~~k~l-------~~kivvi~nGV-D~~~f~p~~-------~~~~r~~~G-i~~~~-~~ILfVGRL~~~-KGid~L 550 (781)
+++|+..++. ..++.+++||+ |...+.+.. ....+.++| ++++. .+++++||+... ||++.|
T Consensus 146 i~~s~~~~~~l~~~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~kg~~~l 225 (384)
T 1vgv_A 146 FSPTETSRQNLLRENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEI 225 (384)
T ss_dssp EESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCHHHHHH
T ss_pred EcCcHHHHHHHHHcCCChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccCCCCCEEEEEeCCccccchHHHHH
Confidence 9999977652 12467788885 432221110 012344555 54434 467899999876 999999
Q ss_pred HHHHHHhhccCCCcEEEEE-eCCC-CHHHHHHHHHhcCCcEEEcCCCCCHH--HHHhcccEEEEccCCCCChHHHHHHHH
Q 003992 551 IDLLAKHKNDLDGFKLDVF-GNGE-DAYEVQSAAKRLDLNLNFQKGRDHAD--DSLHGYKVFINPSISDVLCTATAEALA 626 (781)
Q Consensus 551 LeA~~~L~~~~p~i~LvIV-G~Gp-~~~~L~~~a~~lgL~V~FlG~v~~~e--~ly~~ADVfVlPS~~EgfGlviLEAMA 626 (781)
++|+.++.++.|+++++++ |.|+ ..+.+++.+... -+|.|+|+....+ .+|+.||+||+|| |.+++||||
T Consensus 226 i~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~~~-~~v~~~g~~~~~~~~~~~~~ad~~v~~S-----g~~~lEA~a 299 (384)
T 1vgv_A 226 CHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHV-KNVILIDPQEYLPFVWLMNHAWLILTDS-----GGIQEEAPS 299 (384)
T ss_dssp HHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTC-TTEEEECCCCHHHHHHHHHHCSEEEESS-----STGGGTGGG
T ss_pred HHHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhhcC-CCEEEeCCCCHHHHHHHHHhCcEEEECC-----cchHHHHHH
Confidence 9999999888889999886 4443 345555554321 2499987766544 8999999999999 344899999
Q ss_pred hCCcEEEeCC-CCcceeecCCccccC-CCHHHHHHHHHHHHhCCCCCCCh-----HHHHcCCHHHHHHHHHHHhhhcccc
Q 003992 627 MGKFVICADH-PSNEFFRSFPNCLTY-KTSEDFVARVKEALANDPQPLTP-----EQRYNLSWEAATQRFIEYSELNRIL 699 (781)
Q Consensus 627 ~G~PVVaSd~-gg~g~L~~~~ngv~~-~D~eeLa~aI~~LL~d~~~r~~m-----~~~~~fSWe~iaerll~~Ye~~~vl 699 (781)
||+|||+++. ++...++...+|+.. .|+++++++|.++++|++.+.+| .....|+|+.+++.+.+.|+ +..
T Consensus 300 ~G~PvI~~~~~~~~~e~v~~g~g~lv~~d~~~la~~i~~ll~d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~ 377 (384)
T 1vgv_A 300 LGKPVLVMRDTTERPEAVTAGTVRLVGTDKQRIVEEVTRLLKDENEYQAMSRAHNPYGDGQACSRILEALKNNRI--SLG 377 (384)
T ss_dssp GTCCEEEESSCCSCHHHHHHTSEEEECSSHHHHHHHHHHHHHCHHHHHHHHSSCCTTCCSCHHHHHHHHHHHTCC--CC-
T ss_pred cCCCEEEccCCCCcchhhhCCceEEeCCCHHHHHHHHHHHHhChHHHhhhhhccCCCcCCCHHHHHHHHHHHHHH--hhc
Confidence 9999999986 766554443355443 59999999999999998766665 23357999999999999998 554
Q ss_pred c
Q 003992 700 N 700 (781)
Q Consensus 700 ~ 700 (781)
+
T Consensus 378 ~ 378 (384)
T 1vgv_A 378 S 378 (384)
T ss_dssp -
T ss_pred c
Confidence 3
No 21
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.91 E-value=1.9e-24 Score=214.00 Aligned_cols=168 Identities=13% Similarity=0.144 Sum_probs=143.0
Q ss_pred eeCCCCCCCCC--CCc------chhhHhhhCcCCCCcEEEEEeecc-CccCHHHHHHHHHHhh--ccCCCcEEEEEeCCC
Q 003992 505 NVHGVNPKFLQ--IGE------KVATDREQGQQAFSKGAYFLGKMV-WAKGYRELIDLLAKHK--NDLDGFKLDVFGNGE 573 (781)
Q Consensus 505 i~nGVD~~~f~--p~~------~~~~r~~~Gi~~~~~~ILfVGRL~-~~KGid~LLeA~~~L~--~~~p~i~LvIVG~Gp 573 (781)
++||||++.|. +.. +...++++++++ .++++|+|++. +.||++.+++++..+. ++.++++|+|+|+|+
T Consensus 2 ipngvd~~~f~~~~~~~~~~~~~~~~r~~~~~~~-~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~G~~~ 80 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTGSRDERKKSLLSKFGMDE-GVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGD 80 (200)
T ss_dssp ---CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCS-CEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBC
T ss_pred CCCccChhhccccccccchhhHHHHHHHHcCCCC-CCEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEECCCC
Confidence 68999999888 765 455677888764 46899999999 9999999999999997 777899999999999
Q ss_pred --CHHHHHHHHHhcCCcEEE-cCCCCCHH--HHHhcccEEEEccCCCCChHHHHHHHHhCCcEEEeCCCCcceeecCCcc
Q 003992 574 --DAYEVQSAAKRLDLNLNF-QKGRDHAD--DSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSNEFFRSFPNC 648 (781)
Q Consensus 574 --~~~~L~~~a~~lgL~V~F-lG~v~~~e--~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~g~L~~~~ng 648 (781)
..+.+++.+++++ .|.| +|++++.+ .+|+.||++|+||..|+||++++||||||+|||+++.++...+..+.++
T Consensus 81 ~~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~~~~~~g 159 (200)
T 2bfw_A 81 PELEGWARSLEEKHG-NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNETG 159 (200)
T ss_dssp HHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHHHHHHCCTTTC
T ss_pred hHHHHHHHHHHHhcC-CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCCCChHHHcCCCce
Confidence 7889999999887 8999 99999655 9999999999999999999999999999999999999877554444555
Q ss_pred ccC--CCHHHHHHHHHHHHh-CCCCCCCh
Q 003992 649 LTY--KTSEDFVARVKEALA-NDPQPLTP 674 (781)
Q Consensus 649 v~~--~D~eeLa~aI~~LL~-d~~~r~~m 674 (781)
+.. +|+++++++|.++++ |++.+.+|
T Consensus 160 ~~~~~~~~~~l~~~i~~l~~~~~~~~~~~ 188 (200)
T 2bfw_A 160 ILVKAGDPGELANAILKALELSRSDLSKF 188 (200)
T ss_dssp EEECTTCHHHHHHHHHHHHHCCHHHHHHH
T ss_pred EEecCCCHHHHHHHHHHHHhcCHHHHHHH
Confidence 443 699999999999999 88766655
No 22
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.91 E-value=2.2e-24 Score=207.69 Aligned_cols=155 Identities=17% Similarity=0.198 Sum_probs=129.3
Q ss_pred CcEEEEEeeccCccCHHHHHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHH--HHHhcccEEE
Q 003992 532 SKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHAD--DSLHGYKVFI 609 (781)
Q Consensus 532 ~~~ILfVGRL~~~KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e--~ly~~ADVfV 609 (781)
++.++|+|++.+.||++.+++|+..+++ .++++|+|+|+|+..+.++++++++++.|.| |++++.+ .+|+.||++|
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~-~~~~~l~i~G~g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~adv~v 79 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKY-KQDIVLLLKGKGPDEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTCTLYV 79 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTT-GGGEEEEEECCSTTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTCSEEE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhcc-CCCeEEEEEeCCccHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhCCEEE
Confidence 4678999999999999999999999854 4899999999999999999999999988999 9998665 9999999999
Q ss_pred EccCCCCChHHHHHHHHhCC-cEEEe-CCCCcceeec-CCccccCCCHHHHHHHHHHHHhCCCCCCCh-----HHHHcCC
Q 003992 610 NPSISDVLCTATAEALAMGK-FVICA-DHPSNEFFRS-FPNCLTYKTSEDFVARVKEALANDPQPLTP-----EQRYNLS 681 (781)
Q Consensus 610 lPS~~EgfGlviLEAMA~G~-PVVaS-d~gg~g~L~~-~~ngv~~~D~eeLa~aI~~LL~d~~~r~~m-----~~~~~fS 681 (781)
+||.+|+||++++||||||+ |||++ +.|+...+.. +.+.+..+|+++++++|.++++|++.+.+| +..++|+
T Consensus 80 ~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~s 159 (166)
T 3qhp_A 80 HAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERSLFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSALNYT 159 (166)
T ss_dssp ECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGGEECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC
T ss_pred ECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCceEEcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999998 99995 5676655444 444566699999999999999998877766 3457899
Q ss_pred HHHHHHH
Q 003992 682 WEAATQR 688 (781)
Q Consensus 682 We~iaer 688 (781)
|+.++++
T Consensus 160 ~~~~~~~ 166 (166)
T 3qhp_A 160 LENSVIQ 166 (166)
T ss_dssp -------
T ss_pred hhhhhcC
Confidence 9988764
No 23
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.91 E-value=1.8e-24 Score=246.49 Aligned_cols=191 Identities=10% Similarity=0.073 Sum_probs=144.8
Q ss_pred CcEEeeCCCCCCCCCCCc-------chhhHhhhCcCCCCcEEEEEeeccCccCHHHHHHHHHHhhccCCC----cEEEEE
Q 003992 501 SVICNVHGVNPKFLQIGE-------KVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDG----FKLDVF 569 (781)
Q Consensus 501 kivvi~nGVD~~~f~p~~-------~~~~r~~~Gi~~~~~~ILfVGRL~~~KGid~LLeA~~~L~~~~p~----i~LvIV 569 (781)
++.+++||||++.|.+.. ....+++++ ++++|++|||+.+.||++.+|+|++++.+++|+ ++|+++
T Consensus 220 ~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~~~---~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~v 296 (482)
T 1uqt_A 220 RTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELK---NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQI 296 (482)
T ss_dssp EEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTT---TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEE
T ss_pred EEEEEeccCCHHHHHHHhcCcchHHHHHHHHHhC---CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEE
Confidence 467889999977664321 223455565 578999999999999999999999999887765 789999
Q ss_pred eC-----CCCH----HHHHHHHHhcC-------C-cEEE-cCCCCCHH--HHHhcccEEEEccCCCCChHHHHHHHHhCC
Q 003992 570 GN-----GEDA----YEVQSAAKRLD-------L-NLNF-QKGRDHAD--DSLHGYKVFINPSISDVLCTATAEALAMGK 629 (781)
Q Consensus 570 G~-----Gp~~----~~L~~~a~~lg-------L-~V~F-lG~v~~~e--~ly~~ADVfVlPS~~EgfGlviLEAMA~G~ 629 (781)
|+ |++. +++++++.+.+ . .|.| .|.++..+ ++|+.|||||+||.+||||++++||||||+
T Consensus 297 G~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~ 376 (482)
T 1uqt_A 297 APTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQD 376 (482)
T ss_dssp CCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSC
T ss_pred ECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCC
Confidence 95 3322 34445544322 1 2664 68887776 999999999999999999999999999997
Q ss_pred -----cEEEeCCCCcceeecCCccccCCCHHHHHHHHHHHHhCCC-CCCCh-----HHHHcCCHHHHHHHHHHHhh
Q 003992 630 -----FVICADHPSNEFFRSFPNCLTYKTSEDFVARVKEALANDP-QPLTP-----EQRYNLSWEAATQRFIEYSE 694 (781)
Q Consensus 630 -----PVVaSd~gg~g~L~~~~ngv~~~D~eeLa~aI~~LL~d~~-~r~~m-----~~~~~fSWe~iaerll~~Ye 694 (781)
|||+|+.+|....+...-.+.+.|+++++++|.+++++++ ++.++ +....|||+..++++++.|+
T Consensus 377 ~~~~gpvV~S~~~G~~~~l~~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~ 452 (482)
T 1uqt_A 377 PANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLK 452 (482)
T ss_dssp TTSCCEEEEETTBGGGGTCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEECCCCCHHHhCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999987665322221111455899999999999998653 34444 34567999999999999998
No 24
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.90 E-value=3.5e-24 Score=232.47 Aligned_cols=270 Identities=9% Similarity=-0.083 Sum_probs=180.1
Q ss_pred HhHHhhcccCCCcEEEECCCchhHHHHHHHHHHhhcC-CEEEEEECCcHHHHHHhhcchhHHHHHHHHHHHHHHhcCCEE
Q 003992 410 GDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKV 488 (781)
Q Consensus 410 ~~L~k~I~~~kPDVIhl~~P~~l~~~~~g~~~akk~~-pvV~ivHt~y~~y~~~~~~~~~~~~l~k~l~r~l~r~~aD~V 488 (781)
..+.+++++++||+||++.+....+.. ...++..+ |++ ++|+.+..+.. +. .. ......+++.+ .+|.+
T Consensus 81 ~~l~~~l~~~~pDvv~~~~~~~~~~~~--~~~a~~~~ip~v-~~~~~~~~~~~-~~--~~---~~~~~~~~~~~-~~~~~ 150 (376)
T 1v4v_A 81 PQAARALKEMGADYVLVHGDTLTTFAV--AWAAFLEGIPVG-HVEAGLRSGNL-KE--PF---PEEANRRLTDV-LTDLD 150 (376)
T ss_dssp HHHHHHHHHTTCSEEEEESSCHHHHHH--HHHHHHTTCCEE-EETCCCCCSCT-TS--ST---THHHHHHHHHH-HCSEE
T ss_pred HHHHHHHHHcCCCEEEEeCChHHHHHH--HHHHHHhCCCEE-EEeCCCccccc-cC--CC---chHHHHHHHHH-Hhcee
Confidence 457788889999999998765444433 44566667 875 44443311110 00 00 01122333444 69999
Q ss_pred EEcChhhhhc------C-CCcEEeeCCC-CCCCCCCCcchhhHhhhCcCCCCcEEEEEeeccCccCHHHHHHHHHHhhcc
Q 003992 489 LRLSAATQDL------P-KSVICNVHGV-NPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKND 560 (781)
Q Consensus 489 I~vS~~~k~l------~-~kivvi~nGV-D~~~f~p~~~~~~r~~~Gi~~~~~~ILfVGRL~~~KGid~LLeA~~~L~~~ 560 (781)
+++|+..++. + .++.+++|++ |...+.+ .+...+..++ +...+++++||+...||++.+++|+.++.++
T Consensus 151 ~~~s~~~~~~l~~~g~~~~ki~vi~n~~~d~~~~~~-~~~~~~~~~~--~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~ 227 (376)
T 1v4v_A 151 FAPTPLAKANLLKEGKREEGILVTGQTGVDAVLLAA-KLGRLPEGLP--EGPYVTVTMHRRENWPLLSDLAQALKRVAEA 227 (376)
T ss_dssp EESSHHHHHHHHTTTCCGGGEEECCCHHHHHHHHHH-HHCCCCTTCC--SSCEEEECCCCGGGGGGHHHHHHHHHHHHHH
T ss_pred eCCCHHHHHHHHHcCCCcceEEEECCchHHHHhhhh-hhhHHHHhcC--CCCEEEEEeCcccchHHHHHHHHHHHHHHhh
Confidence 9999976652 1 2456677754 4321111 0011112222 2345667899998889999999999999887
Q ss_pred CCCcEEEEE-eCCC-CHHHHHHHHHhcCCcEEEcCCCCCHH--HHHhcccEEEEccCCCCChHHHHHHHHhCCcEEEe-C
Q 003992 561 LDGFKLDVF-GNGE-DAYEVQSAAKRLDLNLNFQKGRDHAD--DSLHGYKVFINPSISDVLCTATAEALAMGKFVICA-D 635 (781)
Q Consensus 561 ~p~i~LvIV-G~Gp-~~~~L~~~a~~lgL~V~FlG~v~~~e--~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaS-d 635 (781)
.|+++++++ |+|+ ..+.+++.+.. .-+|.|+|++...+ .+|+.||+||+|| + |+ ++||||||+|||++ +
T Consensus 228 ~~~~~lv~~~g~~~~~~~~l~~~~~~-~~~v~~~g~~g~~~~~~~~~~ad~~v~~S--~--g~-~lEA~a~G~PvI~~~~ 301 (376)
T 1v4v_A 228 FPHLTFVYPVHLNPVVREAVFPVLKG-VRNFVLLDPLEYGSMAALMRASLLLVTDS--G--GL-QEEGAALGVPVVVLRN 301 (376)
T ss_dssp CTTSEEEEECCSCHHHHHHHHHHHTT-CTTEEEECCCCHHHHHHHHHTEEEEEESC--H--HH-HHHHHHTTCCEEECSS
T ss_pred CCCeEEEEECCCCHHHHHHHHHHhcc-CCCEEEECCCCHHHHHHHHHhCcEEEECC--c--CH-HHHHHHcCCCEEeccC
Confidence 889999886 7665 45667666542 12499997665443 8999999999999 2 44 88999999999998 4
Q ss_pred CCCcceeecCCccccC-CCHHHHHHHHHHHHhCCCCCCCh-HHHHcCCHHHHHHHHHHHhhhccccc
Q 003992 636 HPSNEFFRSFPNCLTY-KTSEDFVARVKEALANDPQPLTP-EQRYNLSWEAATQRFIEYSELNRILN 700 (781)
Q Consensus 636 ~gg~g~L~~~~ngv~~-~D~eeLa~aI~~LL~d~~~r~~m-~~~~~fSWe~iaerll~~Ye~~~vl~ 700 (781)
.++...+....+++.. .|+++|+++|.++++|++.+.+| +....|.|...++++.+.+. +.++
T Consensus 302 ~~~~~~~~~~g~g~lv~~d~~~la~~i~~ll~d~~~~~~~~~~~~~~~~~~~~~~i~~~i~--~~~~ 366 (376)
T 1v4v_A 302 VTERPEGLKAGILKLAGTDPEGVYRVVKGLLENPEELSRMRKAKNPYGDGKAGLMVARGVA--WRLG 366 (376)
T ss_dssp SCSCHHHHHHTSEEECCSCHHHHHHHHHHHHTCHHHHHHHHHSCCSSCCSCHHHHHHHHHH--HHTT
T ss_pred CCcchhhhcCCceEECCCCHHHHHHHHHHHHhChHhhhhhcccCCCCCCChHHHHHHHHHH--HHhc
Confidence 5666554444455444 79999999999999998777777 33456788788888888887 6653
No 25
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.89 E-value=1.2e-22 Score=236.06 Aligned_cols=274 Identities=14% Similarity=0.082 Sum_probs=171.0
Q ss_pred ccCCCcEEEECCCchhHHHHHHHHHHh-hc-C-CEEEEEECCcHHHHHH--h-hcch----------hHHH------HHH
Q 003992 417 PSKDADIAILEEPEHLNWYHHGKRWTD-KF-N-HVVGVVHTNYLEYIKR--E-KNGA----------LQAF------FVK 474 (781)
Q Consensus 417 ~~~kPDVIhl~~P~~l~~~~~g~~~ak-k~-~-pvV~ivHt~y~~y~~~--~-~~~~----------~~~~------l~k 474 (781)
..++|||+|+|+-.. +.. ..+.+ .. + +.|.++|..- +.+. . ++.. .... -..
T Consensus 178 ~~~~pdIiH~HDW~t-g~~---~~~Lk~~~~~i~tVfTiH~te--lGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~ 251 (725)
T 3nb0_A 178 DSQHAIVAHFHEWLA-GVA---LPLCRKRRIDVVTIFTTHATL--LGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRY 251 (725)
T ss_dssp CCSEEEEEEEESGGG-CTH---HHHHHHTTCSCEEEEEESSCH--HHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHH
T ss_pred CCCCCcEEEeCchhh-hHH---HHHHHHhCCCCCEEEEEecch--hhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHH
Confidence 346799999997322 111 22333 23 3 7889998652 1111 0 1100 0000 012
Q ss_pred HHHHHHHHhcCCEEEEcChhhhh----cCC--CcEEeeCCCCCCCCCCCc-----chhhHhh------------hCcCCC
Q 003992 475 HINNWVTRAYCDKVLRLSAATQD----LPK--SVICNVHGVNPKFLQIGE-----KVATDRE------------QGQQAF 531 (781)
Q Consensus 475 ~l~r~l~r~~aD~VI~vS~~~k~----l~~--kivvi~nGVD~~~f~p~~-----~~~~r~~------------~Gi~~~ 531 (781)
.+++.... +||.|+|||+.+++ +.. .-.+|+||||...|.+.. +...+.+ ++++.+
T Consensus 252 ~~EKaga~-~AD~ITTVS~~yA~Ei~~Ll~r~~d~iIpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~d 330 (725)
T 3nb0_A 252 CIERAAAH-SADVFTTVSQITAFEAEHLLKRKPDGILPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLD 330 (725)
T ss_dssp HHHHHHHH-HSSEEEESSHHHHHHHHHHTSSCCSEECCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGG
T ss_pred HHHHHHHH-hCCEEEECCHHHHHHHHHHhcCCCCEEEcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCC
Confidence 23444444 79999999996654 221 224499999999987741 1111111 133333
Q ss_pred CcEE-EEEeecc-CccCHHHHHHHHHHhhcc-------CCCcEEEEEeCCCCH---------------------------
Q 003992 532 SKGA-YFLGKMV-WAKGYRELIDLLAKHKND-------LDGFKLDVFGNGEDA--------------------------- 575 (781)
Q Consensus 532 ~~~I-LfVGRL~-~~KGid~LLeA~~~L~~~-------~p~i~LvIVG~Gp~~--------------------------- 575 (781)
+..+ ..+||+. .+||++.+++|+.+|... ..-+.|+|+..|...
T Consensus 331 k~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~ 410 (725)
T 3nb0_A 331 NTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIG 410 (725)
T ss_dssp GEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHh
Confidence 4444 4579999 689999999999988743 233777887765211
Q ss_pred --------------------------------------------------------------HHHHHHHHhcCCc-----
Q 003992 576 --------------------------------------------------------------YEVQSAAKRLDLN----- 588 (781)
Q Consensus 576 --------------------------------------------------------------~~L~~~a~~lgL~----- 588 (781)
+.+...++++++.
T Consensus 411 ~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~d 490 (725)
T 3nb0_A 411 KRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSD 490 (725)
T ss_dssp HHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTC
T ss_pred HHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCC
Confidence 1111122333322
Q ss_pred ---EEEc-CCCC--------CHHHHHhcccEEEEccCCCCChHHHHHHHHhCCcEEEeCCCCcceeec-C-------Ccc
Q 003992 589 ---LNFQ-KGRD--------HADDSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSNEFFRS-F-------PNC 648 (781)
Q Consensus 589 ---V~Fl-G~v~--------~~e~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~g~L~~-~-------~ng 648 (781)
|.|+ ++.+ +..++|+.||+||+||.+|+||++++||||||+|||+|+.||.+..+. + .+|
T Consensus 491 rVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG~~d~V~dg~~~~~~~~tG 570 (725)
T 3nb0_A 491 RVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDYG 570 (725)
T ss_dssp SEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBHHHHHHHTTSCHHHHHHTT
T ss_pred ceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCChhhhhhccccccCCCCce
Confidence 6676 3443 245899999999999999999999999999999999999998754332 2 234
Q ss_pred cc-----CCCHHHHHHHHHHHHh-----CCCCCCCh-----HHHHcCCHHHHHHHHHHHhhhcccc
Q 003992 649 LT-----YKTSEDFVARVKEALA-----NDPQPLTP-----EQRYNLSWEAATQRFIEYSELNRIL 699 (781)
Q Consensus 649 v~-----~~D~eeLa~aI~~LL~-----d~~~r~~m-----~~~~~fSWe~iaerll~~Ye~~~vl 699 (781)
+. ..|+++++++|.+++. ++..+..| +.+..|+|+.++++++++|+ +++
T Consensus 571 ~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye--~aL 634 (725)
T 3nb0_A 571 IYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKARQ--LAL 634 (725)
T ss_dssp EEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHHHHHH--HHH
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--HHH
Confidence 32 2466666666666553 33334444 23468999999999999998 776
No 26
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.86 E-value=1.1e-20 Score=207.92 Aligned_cols=229 Identities=10% Similarity=-0.018 Sum_probs=164.0
Q ss_pred HhHHhhcccCCCcEEEECCCchhHHHHHHHHHHhhcCCEEEEEECCcHHHHHHhhcchhHHHHHHHHHHHHHHhcCCEEE
Q 003992 410 GDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVL 489 (781)
Q Consensus 410 ~~L~k~I~~~kPDVIhl~~P~~l~~~~~g~~~akk~~pvV~ivHt~y~~y~~~~~~~~~~~~l~k~l~r~l~r~~aD~VI 489 (781)
..+.+++++.+||+||+........+. ..+++ |++.+.+... . . . +.+++.+ .+|.|+
T Consensus 101 ~~l~~~l~~~~pDiv~~~~~~~~~~~~---~~~~~--p~~~~~~~~~-~------~----~-----~~~~~~~-~~d~ii 158 (374)
T 2xci_A 101 FSVKRFEELSKPKALIVVEREFWPSLI---IFTKV--PKILVNAYAK-G------S----L-----IEKILSK-KFDLII 158 (374)
T ss_dssp HHHHHHHHHHCCSEEEEESCCCCHHHH---HHCCS--CEEEEEECCC-C------C----H-----HHHHHHT-TCSEEE
T ss_pred HHHHHHHHHhCCCEEEEECccCcHHHH---HHHhC--CEEEEEeecC-c------h----H-----HHHHHHH-hCCEEE
Confidence 457788899999999986544322211 11222 7655444321 1 0 0 2333444 699999
Q ss_pred EcChhhhhcC-----CCcEEeeCCC-CCCCCCCCcchhhHhhhCcCCCCcEEEEEeeccCccCHHHHHHHHHHhhccCCC
Q 003992 490 RLSAATQDLP-----KSVICNVHGV-NPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDG 563 (781)
Q Consensus 490 ~vS~~~k~l~-----~kivvi~nGV-D~~~f~p~~~~~~r~~~Gi~~~~~~ILfVGRL~~~KGid~LLeA~~~L~~~~p~ 563 (781)
++|+..++.. .++.+++|+. ++... + ...+ ..+++++.|+ +.||++.|++|+.++.++.|+
T Consensus 159 ~~S~~~~~~l~~~g~~ki~vi~n~~f~~~~~-~------~~~l----~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~ 225 (374)
T 2xci_A 159 MRTQEDVEKFKTFGAKRVFSCGNLKFICQKG-K------GIKL----KGEFIVAGSI--HTGEVEIILKAFKEIKKTYSS 225 (374)
T ss_dssp ESCHHHHHHHHTTTCCSEEECCCGGGCCCCC-S------CCCC----SSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTT
T ss_pred ECCHHHHHHHHHcCCCeEEEcCCCccCCCcC-h------hhhh----cCCEEEEEeC--CCchHHHHHHHHHHHHhhCCC
Confidence 9999776521 1567777763 22110 1 0011 1255666664 579999999999999988899
Q ss_pred cEEEEEeCCCCH-HHHHHHHHhcCCc----------EEEcCCCCCHHHHHhcccEEEEccCC-CCChHHHHHHHHhCCcE
Q 003992 564 FKLDVFGNGEDA-YEVQSAAKRLDLN----------LNFQKGRDHADDSLHGYKVFINPSIS-DVLCTATAEALAMGKFV 631 (781)
Q Consensus 564 i~LvIVG~Gp~~-~~L~~~a~~lgL~----------V~FlG~v~~~e~ly~~ADVfVlPS~~-EgfGlviLEAMA~G~PV 631 (781)
++|+|+|+|+++ ++++++++++++. |.|.|..++...+|+.||+|++||.+ |++|++++||||||+||
T Consensus 226 ~~lvivG~g~~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PV 305 (374)
T 2xci_A 226 LKLILVPRHIENAKIFEKKARDFGFKTSFFENLEGDVILVDRFGILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPV 305 (374)
T ss_dssp CEEEEEESSGGGHHHHHHHHHHTTCCEEETTCCCSSEEECCSSSCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCE
T ss_pred cEEEEECCCHHHHHHHHHHHHHCCCceEEecCCCCcEEEECCHHHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCCE
Confidence 999999999987 6899999988864 67778888888999999998888654 77899999999999999
Q ss_pred EEe-CCCCcceeec----CCccccCCCHHHHHHHHHHHHhCCCCCCCh
Q 003992 632 ICA-DHPSNEFFRS----FPNCLTYKTSEDFVARVKEALANDPQPLTP 674 (781)
Q Consensus 632 VaS-d~gg~g~L~~----~~ngv~~~D~eeLa~aI~~LL~d~~~r~~m 674 (781)
|++ +.++++.+.. .+.++..+|+++|+++|.++++| +.+.+|
T Consensus 306 I~~~~~~~~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll~d-~~r~~m 352 (374)
T 2xci_A 306 IYGPYTHKVNDLKEFLEKEGAGFEVKNETELVTKLTELLSV-KKEIKV 352 (374)
T ss_dssp EECSCCTTSHHHHHHHHHTTCEEECCSHHHHHHHHHHHHHS-CCCCCH
T ss_pred EECCCccChHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHhH-HHHHHH
Confidence 986 6677655332 23335669999999999999999 999998
No 27
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.85 E-value=2.2e-20 Score=212.60 Aligned_cols=263 Identities=11% Similarity=0.005 Sum_probs=180.6
Q ss_pred CCcEEEECCCchhHHHHHHHHHHhhc-C-CEEEEEECCcHHHHHHhhcchhHHHHHHHHHHHHHHhcCCEEEEcChh-hh
Q 003992 420 DADIAILEEPEHLNWYHHGKRWTDKF-N-HVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAA-TQ 496 (781)
Q Consensus 420 kPDVIhl~~P~~l~~~~~g~~~akk~-~-pvV~ivHt~y~~y~~~~~~~~~~~~l~k~l~r~l~r~~aD~VI~vS~~-~k 496 (781)
.-|+|++|++..+.. . ..+.++. + ++...+|+.++.......... ...+.+.+.+. .||.|...+.. ++
T Consensus 149 ~~D~VwVhDYhL~ll-p--~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~---~~r~ell~gll--~~DligF~t~~y~~ 220 (496)
T 3t5t_A 149 ADPVYLVHDYQLVGV-P--ALLREQRPDAPILLFVHIPWPSADYWRILPK---EIRTGILHGML--PATTIGFFADRWCR 220 (496)
T ss_dssp SSCEEEEESGGGTTH-H--HHHHHHCTTSCEEEECCSCCCCHHHHTTSCH---HHHHHHHHHHT--TSSEEEESSHHHHH
T ss_pred CCCEEEEeCccHhHH-H--HHHHhhCCCCeEEEEEcCCCCCHHHHhhCcH---hHHHHHHHHHH--hCCEEEEecHHHHH
Confidence 578999999765432 2 1222332 3 888889998875532221110 00111222222 37888888872 22
Q ss_pred h-------cC-C-----------------CcEEeeCCCCCCCCCCCcc---hhhHhhhCcCCCCcEEEEEeeccCccCHH
Q 003992 497 D-------LP-K-----------------SVICNVHGVNPKFLQIGEK---VATDREQGQQAFSKGAYFLGKMVWAKGYR 548 (781)
Q Consensus 497 ~-------l~-~-----------------kivvi~nGVD~~~f~p~~~---~~~r~~~Gi~~~~~~ILfVGRL~~~KGid 548 (781)
. +. . ++.++++|||+..|.+... ...+++++ ++++|++|||+++.||+.
T Consensus 221 ~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~~---~~~lIl~VgRLd~~KGi~ 297 (496)
T 3t5t_A 221 NFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWAD---GHRLVVHSGRTDPIKNAE 297 (496)
T ss_dssp HHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHHT---TSEEEEEEEESSGGGCHH
T ss_pred HHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHhC---CceEEEEcccCccccCHH
Confidence 2 11 1 2357789999888765432 34566666 678999999999999999
Q ss_pred HHHHHHHHhhccCCC---cEEEEEe-----CCCCHHH----HHHHHHhcC----C-cEEEcCCCCCHH--HHHhcccEEE
Q 003992 549 ELIDLLAKHKNDLDG---FKLDVFG-----NGEDAYE----VQSAAKRLD----L-NLNFQKGRDHAD--DSLHGYKVFI 609 (781)
Q Consensus 549 ~LLeA~~~L~~~~p~---i~LvIVG-----~Gp~~~~----L~~~a~~lg----L-~V~FlG~v~~~e--~ly~~ADVfV 609 (781)
.+|+|+ ++.+++|+ +.|+++| +|++..+ +++++.+.+ . .|.|+|.++..+ ++|+.|||||
T Consensus 298 ~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~v~~~el~aly~~ADv~v 376 (496)
T 3t5t_A 298 RAVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDNDNDVNHTIACFRRADLLI 376 (496)
T ss_dssp HHHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCHHHHHHHHHHCSEEE
T ss_pred HHHHHH-HHHHhCcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCCCCHHHHHHHHHhccEEE
Confidence 999999 88887776 5688886 3443333 444444332 2 499999987766 9999999999
Q ss_pred EccCCCCChHHHHHHHHhC---CcEEEeCCCCcceeec-CCccccCCCHHHHHHHHHHHHhCCCC-CCCh-----HHHHc
Q 003992 610 NPSISDVLCTATAEALAMG---KFVICADHPSNEFFRS-FPNCLTYKTSEDFVARVKEALANDPQ-PLTP-----EQRYN 679 (781)
Q Consensus 610 lPS~~EgfGlviLEAMA~G---~PVVaSd~gg~g~L~~-~~ngv~~~D~eeLa~aI~~LL~d~~~-r~~m-----~~~~~ 679 (781)
+||..||||++++|||||| .|+|+|+.+|.....+ ..-.+.+.|+++++++|.++|+++.. ++.+ +....
T Consensus 377 v~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~ 456 (496)
T 3t5t_A 377 FNSTVDGQNLSTFEAPLVNERDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAARP 456 (496)
T ss_dssp ECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHHGGGSEEECTTBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT
T ss_pred ECcccccCChhHHHHHHhCCCCCCEEEeCCCCCHHHhCCCEEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999997 8999998877532221 11115669999999999999998743 3322 56678
Q ss_pred CCHHHHHHHHHHHhh
Q 003992 680 LSWEAATQRFIEYSE 694 (781)
Q Consensus 680 fSWe~iaerll~~Ye 694 (781)
+++..-++.|++...
T Consensus 457 ~d~~~W~~~fl~~L~ 471 (496)
T 3t5t_A 457 WTLEAWVQAQLDGLA 471 (496)
T ss_dssp CBHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh
Confidence 999999999998887
No 28
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.84 E-value=3.3e-21 Score=189.14 Aligned_cols=141 Identities=13% Similarity=0.058 Sum_probs=122.7
Q ss_pred hCcCCCCcEEEEEeeccCccCHHHHHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHH--hcCCc--EEEcCCCCCHH--
Q 003992 526 QGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAK--RLDLN--LNFQKGRDHAD-- 599 (781)
Q Consensus 526 ~Gi~~~~~~ILfVGRL~~~KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~--~lgL~--V~FlG~v~~~e-- 599 (781)
+.++.++++++|+|++.+.||++.+++++..+ ++++|+|+|+|+..+.+++.++ ++++. |.|+|++++.+
T Consensus 17 ~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~ 92 (177)
T 2f9f_A 17 FKFKCYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELI 92 (177)
T ss_dssp CCCCCCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHH
T ss_pred cccCCCCCEEEEEeccccccCHHHHHHHHHhC----CCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHH
Confidence 34456678999999999999999999999987 6899999999999888888888 65664 99999999855
Q ss_pred HHHhcccEEEEccCCCCChHHHHHHHHhCCcEEEeCCCCcceeec-CCcccc-CCCHHHHHHHHHHHHhCCCC
Q 003992 600 DSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSNEFFRS-FPNCLT-YKTSEDFVARVKEALANDPQ 670 (781)
Q Consensus 600 ~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~g~L~~-~~ngv~-~~D~eeLa~aI~~LL~d~~~ 670 (781)
.+|+.||++|+||..|+||++++||||||+|||+++.++...+.. +.+|+. ..|+++++++|.++++|++.
T Consensus 93 ~~~~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~d~~~l~~~i~~l~~~~~~ 165 (177)
T 2f9f_A 93 DLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNADVNEIIDAMKKVSKNPDK 165 (177)
T ss_dssp HHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEECSCHHHHHHHHHHHHHCTTT
T ss_pred HHHHhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEEeCCCHHHHHHHHHHHHhCHHH
Confidence 999999999999999999999999999999999999987654433 445544 59999999999999999874
No 29
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.75 E-value=2.1e-17 Score=181.04 Aligned_cols=258 Identities=9% Similarity=-0.009 Sum_probs=159.8
Q ss_pred HhHHhhcccCCCcEEEECCCchhHHHHHHHHHHhhcC-CEEEEEECCcHHHHHHhhcchhHHHHHHHHHHHHHH------
Q 003992 410 GDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTR------ 482 (781)
Q Consensus 410 ~~L~k~I~~~kPDVIhl~~P~~l~~~~~g~~~akk~~-pvV~ivHt~y~~y~~~~~~~~~~~~l~k~l~r~l~r------ 482 (781)
..+.+.+++++||+||++..... +...+++.+ |+|.+.|+...... ....+.+.+.+++.+
T Consensus 120 ~~l~~~l~~~~pDvVv~~~~~~~-----~~~aa~~~giP~v~~~~~~~~~~~-------~~~~~~~~~~~~~~~~g~~~~ 187 (412)
T 3otg_A 120 DELQPVIERLRPDLVVQEISNYG-----AGLAALKAGIPTICHGVGRDTPDD-------LTRSIEEEVRGLAQRLGLDLP 187 (412)
T ss_dssp HHHHHHHHHHCCSEEEEETTCHH-----HHHHHHHHTCCEEEECCSCCCCSH-------HHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHhcCCCEEEECchhhH-----HHHHHHHcCCCEEEecccccCchh-------hhHHHHHHHHHHHHHcCCCCC
Confidence 45778888999999998754332 234556667 99888776542110 012222233333333
Q ss_pred -----hcCCEEEEcChhhhhcCC-CcEEeeCCCCCCCCCCCcchhhHhhh--CcCCCC-cEEEEEeeccCccCHHHHHHH
Q 003992 483 -----AYCDKVLRLSAATQDLPK-SVICNVHGVNPKFLQIGEKVATDREQ--GQQAFS-KGAYFLGKMVWAKGYRELIDL 553 (781)
Q Consensus 483 -----~~aD~VI~vS~~~k~l~~-kivvi~nGVD~~~f~p~~~~~~r~~~--Gi~~~~-~~ILfVGRL~~~KGid~LLeA 553 (781)
..+|.+++++....+... ++....+.+........ .....+ ...++. .+++++|++. .|+.+.+.++
T Consensus 188 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~vlv~~G~~~-~~~~~~~~~~ 263 (412)
T 3otg_A 188 PGRIDGFGNPFIDIFPPSLQEPEFRARPRRHELRPVPFAEQ---GDLPAWLSSRDTARPLVYLTLGTSS-GGTVEVLRAA 263 (412)
T ss_dssp SSCCGGGGCCEEECSCGGGSCHHHHTCTTEEECCCCCCCCC---CCCCGGGGGSCTTSCEEEEECTTTT-CSCHHHHHHH
T ss_pred cccccCCCCeEEeeCCHHhcCCcccCCCCcceeeccCCCCC---CCCCCccccccCCCCEEEEEcCCCC-cCcHHHHHHH
Confidence 246778888875544321 11000111111111100 001112 112233 4556788886 7888888888
Q ss_pred HHHhhccCCCcEEEEEeCCCC-HHHHHHHHHhcCCcEEEcCCCCCHHHHHhcccEEEEccCCCCChHHHHHHHHhCCcEE
Q 003992 554 LAKHKNDLDGFKLDVFGNGED-AYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVI 632 (781)
Q Consensus 554 ~~~L~~~~p~i~LvIVG~Gp~-~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PVV 632 (781)
+..+.+. ++++++++++.. .+.++ ...-+|.|+|++ +..++|+.||+||.+| .+.+++|||+||+|+|
T Consensus 264 ~~~l~~~--~~~~~~~~g~~~~~~~l~----~~~~~v~~~~~~-~~~~~l~~ad~~v~~~----g~~t~~Ea~a~G~P~v 332 (412)
T 3otg_A 264 IDGLAGL--DADVLVASGPSLDVSGLG----EVPANVRLESWV-PQAALLPHVDLVVHHG----GSGTTLGALGAGVPQL 332 (412)
T ss_dssp HHHHHTS--SSEEEEECCSSCCCTTCC----CCCTTEEEESCC-CHHHHGGGCSEEEESC----CHHHHHHHHHHTCCEE
T ss_pred HHHHHcC--CCEEEEEECCCCChhhhc----cCCCcEEEeCCC-CHHHHHhcCcEEEECC----chHHHHHHHHhCCCEE
Confidence 7777653 567777665544 33332 122249999999 5668999999999775 3589999999999999
Q ss_pred EeCCCCc-----ceeecCCcc--ccCC--CHHHHHHHHHHHHhCCCCCCCh-----HHHHcCCHHHHHHHHHHHhh
Q 003992 633 CADHPSN-----EFFRSFPNC--LTYK--TSEDFVARVKEALANDPQPLTP-----EQRYNLSWEAATQRFIEYSE 694 (781)
Q Consensus 633 aSd~gg~-----g~L~~~~ng--v~~~--D~eeLa~aI~~LL~d~~~r~~m-----~~~~~fSWe~iaerll~~Ye 694 (781)
+...++. ..+.....| +..+ |+++|+++|.++++|+..+.+| +....++|+.+++.+.++|.
T Consensus 333 ~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 408 (412)
T 3otg_A 333 SFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLAEESYRAGARAVAAEIAAMPGPDEVVRLLPGFAS 408 (412)
T ss_dssp ECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHSCCHHHHHTTHHHHHC
T ss_pred ecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhc
Confidence 9877642 122222333 2333 8999999999999998877777 34567899999999998886
No 30
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.72 E-value=9.3e-18 Score=186.24 Aligned_cols=269 Identities=10% Similarity=-0.002 Sum_probs=169.1
Q ss_pred hHhHHhhcccCCCcEEEECCCchhHHHHHHHHHHhhcC-CEEEEEECCcHHHHHHhhcchhHHHHHHHHHHHHHHhcCCE
Q 003992 409 AGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDK 487 (781)
Q Consensus 409 v~~L~k~I~~~kPDVIhl~~P~~l~~~~~g~~~akk~~-pvV~ivHt~y~~y~~~~~~~~~~~~l~k~l~r~l~r~~aD~ 487 (781)
+..+.+++++++||+||++......+.. ...+++.+ |++. ++.....+..+ . .+. ..+++.+....+|.
T Consensus 100 ~~~l~~~l~~~kPDvVi~~g~~~~~~~~--~~aa~~~~IPv~h-~~ag~rs~~~~--~-~~~----~~~~r~~~~~~a~~ 169 (396)
T 3dzc_A 100 LLGMQQVLSSEQPDVVLVHGDTATTFAA--SLAAYYQQIPVGH-VEAGLRTGNIY--S-PWP----EEGNRKLTAALTQY 169 (396)
T ss_dssp HHHHHHHHHHHCCSEEEEETTSHHHHHH--HHHHHTTTCCEEE-ETCCCCCSCTT--S-STT----HHHHHHHHHHTCSE
T ss_pred HHHHHHHHHhcCCCEEEEECCchhHHHH--HHHHHHhCCCEEE-EECCccccccc--c-CCc----HHHHHHHHHHhcCE
Confidence 3468888999999999998866554443 45566667 8653 32211011100 0 000 12233332227999
Q ss_pred EEEcChhhhhc------C-CCcEEeeCC-CCCCCCCCCc-------chhhHhhhC-cCCCCcEEE-EEeec-cCccCHHH
Q 003992 488 VLRLSAATQDL------P-KSVICNVHG-VNPKFLQIGE-------KVATDREQG-QQAFSKGAY-FLGKM-VWAKGYRE 549 (781)
Q Consensus 488 VI~vS~~~k~l------~-~kivvi~nG-VD~~~f~p~~-------~~~~r~~~G-i~~~~~~IL-fVGRL-~~~KGid~ 549 (781)
++++|+..++. + .++.++.|. +|...+.+.. ....++++| ++++.++++ +.+|. ...|+++.
T Consensus 170 ~~~~se~~~~~l~~~G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~~~~~ 249 (396)
T 3dzc_A 170 HFAPTDTSRANLLQENYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGGGFER 249 (396)
T ss_dssp EEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTTHHHH
T ss_pred EECCCHHHHHHHHHcCCCcCcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchhHHHH
Confidence 99999976542 1 245666663 3532221111 133455677 445555555 44454 34588999
Q ss_pred HHHHHHHhhccCCCcEEEEE-eCCCC-HHHHHHHHHhcCCcEEEcCCCCCHH--HHHhcccEEEEccCCCCChHHHHHHH
Q 003992 550 LIDLLAKHKNDLDGFKLDVF-GNGED-AYEVQSAAKRLDLNLNFQKGRDHAD--DSLHGYKVFINPSISDVLCTATAEAL 625 (781)
Q Consensus 550 LLeA~~~L~~~~p~i~LvIV-G~Gp~-~~~L~~~a~~lgL~V~FlG~v~~~e--~ly~~ADVfVlPS~~EgfGlviLEAM 625 (781)
+++|+.++.+++|++++++. |.++. ++.+++... ..-+|.|+++....+ .+|+.||++|.+| | |+ ++|||
T Consensus 250 ll~A~~~l~~~~~~~~~v~~~g~~~~~~~~l~~~~~-~~~~v~~~~~lg~~~~~~l~~~ad~vv~~S---G-g~-~~EA~ 323 (396)
T 3dzc_A 250 ICQALITTAEQHPECQILYPVHLNPNVREPVNKLLK-GVSNIVLIEPQQYLPFVYLMDRAHIILTDS---G-GI-QEEAP 323 (396)
T ss_dssp HHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHTT-TCTTEEEECCCCHHHHHHHHHHCSEEEESC---S-GG-GTTGG
T ss_pred HHHHHHHHHHhCCCceEEEEeCCChHHHHHHHHHHc-CCCCEEEeCCCCHHHHHHHHHhcCEEEECC---c-cH-HHHHH
Confidence 99999999888899999885 54532 233333221 112399988876444 8999999999999 3 44 38999
Q ss_pred HhCCcEEEe-CCCCcceeec-CCccccCCCHHHHHHHHHHHHhCCCCCCChH-HHHcCCHHHHHHHHHHHh
Q 003992 626 AMGKFVICA-DHPSNEFFRS-FPNCLTYKTSEDFVARVKEALANDPQPLTPE-QRYNLSWEAATQRFIEYS 693 (781)
Q Consensus 626 A~G~PVVaS-d~gg~g~L~~-~~ngv~~~D~eeLa~aI~~LL~d~~~r~~m~-~~~~fSWe~iaerll~~Y 693 (781)
+||+|||++ ++++..+++. +.+.+...|+++++++|.++++|++.+.+|. ....|....++++.++..
T Consensus 324 a~G~PvV~~~~~~~~~e~v~~G~~~lv~~d~~~l~~ai~~ll~d~~~~~~m~~~~~~~~~~~aa~ri~~~l 394 (396)
T 3dzc_A 324 SLGKPVLVMRETTERPEAVAAGTVKLVGTNQQQICDALSLLLTDPQAYQAMSQAHNPYGDGKACQRIADIL 394 (396)
T ss_dssp GGTCCEEECCSSCSCHHHHHHTSEEECTTCHHHHHHHHHHHHHCHHHHHHHHTSCCTTCCSCHHHHHHHHH
T ss_pred HcCCCEEEccCCCcchHHHHcCceEEcCCCHHHHHHHHHHHHcCHHHHHHHhhccCCCcCChHHHHHHHHH
Confidence 999999999 6776544333 3332333589999999999999988777772 334566666667766654
No 31
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.64 E-value=1.1e-14 Score=159.73 Aligned_cols=255 Identities=11% Similarity=-0.026 Sum_probs=164.6
Q ss_pred HhHHhhcccCCCcEEEECCCchhHHHHHHHHHHhhcC-CEEEEEECCcHHHHHHhhcchhHHHHHHHHHHHHHHhcCCEE
Q 003992 410 GDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKV 488 (781)
Q Consensus 410 ~~L~k~I~~~kPDVIhl~~P~~l~~~~~g~~~akk~~-pvV~ivHt~y~~y~~~~~~~~~~~~l~k~l~r~l~r~~aD~V 488 (781)
....+++++++||+|+....+... . +...++..+ |++..-.+.++. ..++++.+ +++.|
T Consensus 82 ~~~~~~l~~~~PDvVi~~g~~~s~-p--~~laA~~~~iP~vihe~n~~~G----------------~~nr~l~~-~a~~v 141 (365)
T 3s2u_A 82 FQALRVIRQLRPVCVLGLGGYVTG-P--GGLAARLNGVPLVIHEQNAVAG----------------TANRSLAP-IARRV 141 (365)
T ss_dssp HHHHHHHHHHCCSEEEECSSSTHH-H--HHHHHHHTTCCEEEEECSSSCC----------------HHHHHHGG-GCSEE
T ss_pred HHHHHHHHhcCCCEEEEcCCcchH-H--HHHHHHHcCCCEEEEecchhhh----------------hHHHhhcc-cccee
Confidence 346678899999999988655422 1 234556666 876433222211 12445555 78988
Q ss_pred EEcChhhhhcCCCcEEeeCCCCCCCCCCCcchhhHhhhCcCCCCcEEE-EEeeccCccCHHHHHHHHHHhhccCCCcEEE
Q 003992 489 LRLSAATQDLPKSVICNVHGVNPKFLQIGEKVATDREQGQQAFSKGAY-FLGKMVWAKGYRELIDLLAKHKNDLDGFKLD 567 (781)
Q Consensus 489 I~vS~~~k~l~~kivvi~nGVD~~~f~p~~~~~~r~~~Gi~~~~~~IL-fVGRL~~~KGid~LLeA~~~L~~~~p~i~Lv 567 (781)
++..+.......+..++.|.+.+.++.... .+.++.++++.++ +.|++...+..+.+++++..+... .++.++
T Consensus 142 ~~~~~~~~~~~~k~~~~g~pvr~~~~~~~~-----~~~~~~~~~~~ilv~gGs~g~~~~~~~~~~al~~l~~~-~~~~vi 215 (365)
T 3s2u_A 142 CEAFPDTFPASDKRLTTGNPVRGELFLDAH-----ARAPLTGRRVNLLVLGGSLGAEPLNKLLPEALAQVPLE-IRPAIR 215 (365)
T ss_dssp EESSTTSSCC---CEECCCCCCGGGCCCTT-----SSCCCTTSCCEEEECCTTTTCSHHHHHHHHHHHTSCTT-TCCEEE
T ss_pred eecccccccCcCcEEEECCCCchhhccchh-----hhcccCCCCcEEEEECCcCCccccchhhHHHHHhcccc-cceEEE
Confidence 876665433334566666777766553321 1234444556555 556777777778888999888654 345555
Q ss_pred EEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHhcccEEEEccCCCCChHHHHHHHHhCCcEEEeCCCCc--------
Q 003992 568 VFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSN-------- 639 (781)
Q Consensus 568 IVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~-------- 639 (781)
++++..+.+.+.+..++.+.++.+.+++++..++|+.||++|.-+ .++++.|+|++|+|+|..+.+..
T Consensus 216 ~~~G~~~~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDlvI~ra----G~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~N 291 (365)
T 3s2u_A 216 HQAGRQHAEITAERYRTVAVEADVAPFISDMAAAYAWADLVICRA----GALTVSELTAAGLPAFLVPLPHAIDDHQTRN 291 (365)
T ss_dssp EECCTTTHHHHHHHHHHTTCCCEEESCCSCHHHHHHHCSEEEECC----CHHHHHHHHHHTCCEEECC-----CCHHHHH
T ss_pred EecCccccccccceecccccccccccchhhhhhhhccceEEEecC----CcchHHHHHHhCCCeEEeccCCCCCcHHHHH
Confidence 444334556777777888888899999999999999999999543 47999999999999998766421
Q ss_pred -ceeecCCcc--ccC--CCHHHHHHHHHHHHhCCCCCCCh-HHHHcCCHHHHHHHHHHHhh
Q 003992 640 -EFFRSFPNC--LTY--KTSEDFVARVKEALANDPQPLTP-EQRYNLSWEAATQRFIEYSE 694 (781)
Q Consensus 640 -g~L~~~~ng--v~~--~D~eeLa~aI~~LL~d~~~r~~m-~~~~~fSWe~iaerll~~Ye 694 (781)
.++.....+ +.. -|++.|+++|.++++|++.+.+| +.+..+.-...+++..+..+
T Consensus 292 A~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~~~~~aa~~ia~~i~ 352 (365)
T 3s2u_A 292 AEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQARSLAKPEATRTVVDACL 352 (365)
T ss_dssp HHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCTHHHHHHHHHHHHTCCTTHHHHHHHHHH
T ss_pred HHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHhcCCccHHHHHHHHHH
Confidence 122222222 222 36899999999999999988888 44444544445566655555
No 32
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.64 E-value=5.8e-15 Score=161.01 Aligned_cols=259 Identities=10% Similarity=-0.012 Sum_probs=153.5
Q ss_pred HhHHhhcccCCCcEEEECCCchhHHHHHHHHHHhhcC-CEEEEEECCcHHHHHHhhcchhHHHHHHHHHHHHHHhc----
Q 003992 410 GDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAY---- 484 (781)
Q Consensus 410 ~~L~k~I~~~kPDVIhl~~P~~l~~~~~g~~~akk~~-pvV~ivHt~y~~y~~~~~~~~~~~~l~k~l~r~l~r~~---- 484 (781)
..+.+++++++||+||++.+.. .+ ...+++.+ |++.+.|+.+.... .........+..++.++.
T Consensus 104 ~~l~~~l~~~~PD~Vv~~~~~~---~~--~~aa~~~giP~v~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 172 (391)
T 3tsa_A 104 PEYLRLAEAWRPSVLLVDVCAL---IG--RVLGGLLDLPVVLHRWGVDPTAG------PFSDRAHELLDPVCRHHGLTGL 172 (391)
T ss_dssp HHHHHHHHHHCCSEEEEETTCH---HH--HHHHHHTTCCEEEECCSCCCTTT------HHHHHHHHHHHHHHHHTTSSSS
T ss_pred HHHHHHHHhcCCCEEEeCcchh---HH--HHHHHHhCCCEEEEecCCccccc------cccchHHHHHHHHHHHcCCCCC
Confidence 4567888899999999875332 22 44566677 98887776432110 011112223333333321
Q ss_pred --CCEEEEcChhhhhcCCCcEEeeCCCCCCCCCCC-cchhhHhhhCcCCCCc-EEEEEeeccCccCH-HHHHHHHHHhhc
Q 003992 485 --CDKVLRLSAATQDLPKSVICNVHGVNPKFLQIG-EKVATDREQGQQAFSK-GAYFLGKMVWAKGY-RELIDLLAKHKN 559 (781)
Q Consensus 485 --aD~VI~vS~~~k~l~~kivvi~nGVD~~~f~p~-~~~~~r~~~Gi~~~~~-~ILfVGRL~~~KGi-d~LLeA~~~L~~ 559 (781)
.+.++.+.....+..... .+....+. +. ............++.+ +++++|++...|+. ..+++++.+. .
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-p~~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~ 246 (391)
T 3tsa_A 173 PTPELILDPCPPSLQASDAP----QGAPVQYV-PYNGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-T 246 (391)
T ss_dssp CCCSEEEECSCGGGSCTTSC----CCEECCCC-CCCCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-H
T ss_pred CCCceEEEecChhhcCCCCC----ccCCeeee-cCCCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-c
Confidence 266666655333322210 00001111 10 0000011111122334 45567988775554 7777777777 7
Q ss_pred cCCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHhcccEEEEccCCCCChHHHHHHHHhCCcEEEeCCCCc
Q 003992 560 DLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSN 639 (781)
Q Consensus 560 ~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~ 639 (781)
+.|+++++++|+|+..+.+. ...-+|.+.|+++..+ ++..||+||. ++.+.+++|||++|+|+|+....+.
T Consensus 247 ~~p~~~~v~~~~~~~~~~l~----~~~~~v~~~~~~~~~~-ll~~ad~~v~----~~G~~t~~Ea~~~G~P~v~~p~~~~ 317 (391)
T 3tsa_A 247 ELPGVEAVIAVPPEHRALLT----DLPDNARIAESVPLNL-FLRTCELVIC----AGGSGTAFTATRLGIPQLVLPQYFD 317 (391)
T ss_dssp TSTTEEEEEECCGGGGGGCT----TCCTTEEECCSCCGGG-TGGGCSEEEE----CCCHHHHHHHHHTTCCEEECCCSTT
T ss_pred cCCCeEEEEEECCcchhhcc----cCCCCEEEeccCCHHH-HHhhCCEEEe----CCCHHHHHHHHHhCCCEEecCCccc
Confidence 77899999999887544332 2233499999987654 8899999994 4567899999999999999755322
Q ss_pred ----c-eeecCCcc--ccC----CCHHHHHHHHHHHHhCCCCCCCh-----HHHHcCCHHHHHHHHHHHhh
Q 003992 640 ----E-FFRSFPNC--LTY----KTSEDFVARVKEALANDPQPLTP-----EQRYNLSWEAATQRFIEYSE 694 (781)
Q Consensus 640 ----g-~L~~~~ng--v~~----~D~eeLa~aI~~LL~d~~~r~~m-----~~~~~fSWe~iaerll~~Ye 694 (781)
. .+.....| +.. .|+++++++|.++++|+..+.+| ......+|+.+++.+.+...
T Consensus 318 q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 318 QFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGDTGFAAAAIKLSDEITAMPHPAALVRTLENTAA 388 (391)
T ss_dssp HHHHHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHTCTHHHHHHHHHHHHHHTSCCHHHHHHHHHHC--
T ss_pred HHHHHHHHHHcCCEEecCcccccCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 1 12222233 333 47999999999999998877766 23456788888887766543
No 33
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.62 E-value=4.4e-16 Score=173.31 Aligned_cols=268 Identities=9% Similarity=0.006 Sum_probs=163.7
Q ss_pred hHhHHhhcccCCCcEEEECCCchhHHHHHHHHHHhhcC-CEEEEEECCcHHHHHHhhcchhHHHHHHHHHHHHHHhcCCE
Q 003992 409 AGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDK 487 (781)
Q Consensus 409 v~~L~k~I~~~kPDVIhl~~P~~l~~~~~g~~~akk~~-pvV~ivHt~y~~y~~~~~~~~~~~~l~k~l~r~l~r~~aD~ 487 (781)
+..+.+++++++||+||++......+.. ...+++.+ |++ .++.....+.. +. .+.. .....++.+ .+|.
T Consensus 103 ~~~l~~~l~~~kPD~Vi~~gd~~~~l~~--~laA~~~~IPv~-h~~aglrs~~~-~~--~~p~---~~~r~~~~~-~a~~ 172 (403)
T 3ot5_A 103 MNGINEVIAAENPDIVLVHGDTTTSFAA--GLATFYQQKMLG-HVEAGLRTWNK-YS--PFPE---EMNRQLTGV-MADI 172 (403)
T ss_dssp HHHHHHHHHHHCCSEEEEETTCHHHHHH--HHHHHHTTCEEE-EESCCCCCSCT-TS--STTH---HHHHHHHHH-HCSE
T ss_pred HHHHHHHHHHcCCCEEEEECCchhHHHH--HHHHHHhCCCEE-EEECCcccccc-cc--CCcH---HHHHHHHHH-hcCE
Confidence 3468888999999999998765444433 45566667 754 33321101100 00 0001 111223333 6899
Q ss_pred EEEcChhhhh-c------CCCcEEeeC-CCCCCCCCCC--cchhhHhhhCcCCCCcEEEEEeeccC-ccCHHHHHHHHHH
Q 003992 488 VLRLSAATQD-L------PKSVICNVH-GVNPKFLQIG--EKVATDREQGQQAFSKGAYFLGKMVW-AKGYRELIDLLAK 556 (781)
Q Consensus 488 VI~vS~~~k~-l------~~kivvi~n-GVD~~~f~p~--~~~~~r~~~Gi~~~~~~ILfVGRL~~-~KGid~LLeA~~~ 556 (781)
++++|+..++ + +.++.++.| ++|...+.+. .....++++ .+.+.+++++||... .|+++.+++|+.+
T Consensus 173 ~~~~se~~~~~l~~~Gi~~~~i~vvGn~~~D~~~~~~~~~~~~~~~~~l--~~~~~vlv~~~r~~~~~~~l~~ll~a~~~ 250 (403)
T 3ot5_A 173 HFSPTKQAKENLLAEGKDPATIFVTGNTAIDALKTTVQKDYHHPILENL--GDNRLILMTAHRRENLGEPMQGMFEAVRE 250 (403)
T ss_dssp EEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHSCTTCCCHHHHSC--TTCEEEEECCCCHHHHTTHHHHHHHHHHH
T ss_pred EECCCHHHHHHHHHcCCCcccEEEeCCchHHHHHhhhhhhcchHHHHhc--cCCCEEEEEeCcccccCcHHHHHHHHHHH
Confidence 9999997654 2 124556655 4453222111 112223333 222334456777543 4789999999999
Q ss_pred hhccCCCcEEEEE-eCCCC-HHHHHHHHHhcCCcEEEcCCCCCHH--HHHhcccEEEEccCCCCChHHHHHHHHhCCcEE
Q 003992 557 HKNDLDGFKLDVF-GNGED-AYEVQSAAKRLDLNLNFQKGRDHAD--DSLHGYKVFINPSISDVLCTATAEALAMGKFVI 632 (781)
Q Consensus 557 L~~~~p~i~LvIV-G~Gp~-~~~L~~~a~~lgL~V~FlG~v~~~e--~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PVV 632 (781)
+.+++|++++++. |.++. ++.+++... ..-+|.++|+....+ .+|+.||++|.+| |...+|||+||+|||
T Consensus 251 l~~~~~~~~~v~~~~~~~~~~~~l~~~~~-~~~~v~l~~~l~~~~~~~l~~~ad~vv~~S-----Gg~~~EA~a~g~PvV 324 (403)
T 3ot5_A 251 IVESREDTELVYPMHLNPAVREKAMAILG-GHERIHLIEPLDAIDFHNFLRKSYLVFTDS-----GGVQEEAPGMGVPVL 324 (403)
T ss_dssp HHHHCTTEEEEEECCSCHHHHHHHHHHHT-TCTTEEEECCCCHHHHHHHHHHEEEEEECC-----HHHHHHGGGTTCCEE
T ss_pred HHHhCCCceEEEecCCCHHHHHHHHHHhC-CCCCEEEeCCCCHHHHHHHHHhcCEEEECC-----ccHHHHHHHhCCCEE
Confidence 9888899999887 44432 233333222 112399999987444 8999999999998 444599999999999
Q ss_pred Ee-CCCCcceeecCCccccC-CCHHHHHHHHHHHHhCCCCCCChH-HHHcCCHHHHHHHHHHHhh
Q 003992 633 CA-DHPSNEFFRSFPNCLTY-KTSEDFVARVKEALANDPQPLTPE-QRYNLSWEAATQRFIEYSE 694 (781)
Q Consensus 633 aS-d~gg~g~L~~~~ngv~~-~D~eeLa~aI~~LL~d~~~r~~m~-~~~~fSWe~iaerll~~Ye 694 (781)
++ +.++..+++..++++.. .|+++++++|.++++|++.+.+|. ....|....++++.++...
T Consensus 325 ~~~~~~~~~e~v~~g~~~lv~~d~~~l~~ai~~ll~~~~~~~~m~~~~~~~g~~~aa~rI~~~l~ 389 (403)
T 3ot5_A 325 VLRDTTERPEGIEAGTLKLIGTNKENLIKEALDLLDNKESHDKMAQAANPYGDGFAANRILAAIK 389 (403)
T ss_dssp ECCSSCSCHHHHHHTSEEECCSCHHHHHHHHHHHHHCHHHHHHHHHSCCTTCCSCHHHHHHHHHH
T ss_pred EecCCCcchhheeCCcEEEcCCCHHHHHHHHHHHHcCHHHHHHHHhhcCcccCCcHHHHHHHHHH
Confidence 99 66665444443344444 499999999999999987776673 2334544455555555544
No 34
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.62 E-value=3.4e-14 Score=157.05 Aligned_cols=261 Identities=10% Similarity=0.039 Sum_probs=152.4
Q ss_pred HhHHhhcccCCCcEEEECCCchhHHHHHHHHHHhhcC-CEEEEEECCc--HHHHHHhhcc--------hhHHHHHHHHHH
Q 003992 410 GDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNY--LEYIKREKNG--------ALQAFFVKHINN 478 (781)
Q Consensus 410 ~~L~k~I~~~kPDVIhl~~P~~l~~~~~g~~~akk~~-pvV~ivHt~y--~~y~~~~~~~--------~~~~~l~k~l~r 478 (781)
..+.+++++++||+||++.+.. . +...+++++ |++.+.++.. ..+....... .....+...+++
T Consensus 94 ~~l~~~l~~~~pD~Vi~d~~~~---~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (430)
T 2iyf_A 94 PQLADAYADDIPDLVLHDITSY---P--ARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMWREPRQTERGRAYYARFEA 168 (430)
T ss_dssp HHHHHHHTTSCCSEEEEETTCH---H--HHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCCEEEECCccH---H--HHHHHHHcCCCEEEEecccccccccccccccchhhhhccchHHHHHHHHHHH
Confidence 3477788889999999875432 1 244566777 9887775432 1111000000 001111223333
Q ss_pred HHHHh-----------cCCEEEEcChhhhh-----cCCC-cEEeeCCCCCCCCCCCcchhhHhhhC--cCCCCcEEEEEe
Q 003992 479 WVTRA-----------YCDKVLRLSAATQD-----LPKS-VICNVHGVNPKFLQIGEKVATDREQG--QQAFSKGAYFLG 539 (781)
Q Consensus 479 ~l~r~-----------~aD~VI~vS~~~k~-----l~~k-ivvi~nGVD~~~f~p~~~~~~r~~~G--i~~~~~~ILfVG 539 (781)
++.+. .+|.+++.+....+ ++.+ +..+.++++...... .+. .++...+++++|
T Consensus 169 ~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~vG~~~~~~~~~~--------~~~~~~~~~~~v~v~~G 240 (430)
T 2iyf_A 169 WLKENGITEHPDTFASHPPRSLVLIPKALQPHADRVDEDVYTFVGACQGDRAEEG--------GWQRPAGAEKVVLVSLG 240 (430)
T ss_dssp HHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTGGGSCTTTEEECCCCC-----CC--------CCCCCTTCSEEEEEECT
T ss_pred HHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCcccCCCccEEEeCCcCCCCCCCC--------CCccccCCCCeEEEEcC
Confidence 33321 37888888764432 2223 333333343211000 011 112234667899
Q ss_pred eccCccCHHHHHHHHHHhhccCCCcEE-EEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHhcccEEEEccCCCCCh
Q 003992 540 KMVWAKGYRELIDLLAKHKNDLDGFKL-DVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVFINPSISDVLC 618 (781)
Q Consensus 540 RL~~~KGid~LLeA~~~L~~~~p~i~L-vIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~ADVfVlPS~~EgfG 618 (781)
++. .++.+.+..++..+.+ .+++++ +++|+|++.+.++ .+.-+|.|+|++++. ++|+.||+||..+ .+
T Consensus 241 s~~-~~~~~~~~~~~~~l~~-~~~~~~~~~~G~~~~~~~l~----~~~~~v~~~~~~~~~-~~l~~ad~~v~~~----G~ 309 (430)
T 2iyf_A 241 SAF-TKQPAFYRECVRAFGN-LPGWHLVLQIGRKVTPAELG----ELPDNVEVHDWVPQL-AILRQADLFVTHA----GA 309 (430)
T ss_dssp TTC-C-CHHHHHHHHHHHTT-CTTEEEEEECC---CGGGGC----SCCTTEEEESSCCHH-HHHTTCSEEEECC----CH
T ss_pred CCC-CCcHHHHHHHHHHHhc-CCCeEEEEEeCCCCChHHhc----cCCCCeEEEecCCHH-HHhhccCEEEECC----Cc
Confidence 998 5555555544444433 256777 5789887665442 233349999999988 6999999999865 34
Q ss_pred HHHHHHHHhCCcEEEeCCCCc----c-eeecCCccccC--C--CHHHHHHHHHHHHhCCCCCCCh-----HHHHcCCHHH
Q 003992 619 TATAEALAMGKFVICADHPSN----E-FFRSFPNCLTY--K--TSEDFVARVKEALANDPQPLTP-----EQRYNLSWEA 684 (781)
Q Consensus 619 lviLEAMA~G~PVVaSd~gg~----g-~L~~~~ngv~~--~--D~eeLa~aI~~LL~d~~~r~~m-----~~~~~fSWe~ 684 (781)
++++|||++|+|+|+++.++. . .+.....|+.. + |+++++++|.++++|+..+.++ .....++++.
T Consensus 310 ~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 389 (430)
T 2iyf_A 310 GGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLRETALALVDDPEVARRLRRIQAEMAQEGGTRR 389 (430)
T ss_dssp HHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCHHHH
T ss_pred cHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcCcHHH
Confidence 899999999999999987542 1 22223333333 3 8999999999999998766666 2334678888
Q ss_pred HHHHHHHHhh
Q 003992 685 ATQRFIEYSE 694 (781)
Q Consensus 685 iaerll~~Ye 694 (781)
+++.+++.|+
T Consensus 390 ~~~~i~~~~~ 399 (430)
T 2iyf_A 390 AADLIEAELP 399 (430)
T ss_dssp HHHHHHTTSC
T ss_pred HHHHHHHHhh
Confidence 8888877776
No 35
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=99.61 E-value=6.6e-16 Score=168.51 Aligned_cols=233 Identities=14% Similarity=0.030 Sum_probs=149.1
Q ss_pred CCCcEEEECCCchhH--HHHHHHHHHhhcC-CEEEEEECCcHHHHHHhhcchhHHHHHHHHHHHHHHhcCCEEEEcChhh
Q 003992 419 KDADIAILEEPEHLN--WYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAAT 495 (781)
Q Consensus 419 ~kPDVIhl~~P~~l~--~~~~g~~~akk~~-pvV~ivHt~y~~y~~~~~~~~~~~~l~k~l~r~l~r~~aD~VI~vS~~~ 495 (781)
.++|+|+++.|...+ +......+.++++ +++..+|+.++.... .+ ......++++.+ .||.||++|+.+
T Consensus 73 ~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~~--~~-----~~~~~~E~~~y~-~aD~Ii~~S~~~ 144 (339)
T 3rhz_A 73 RHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMFS--GN-----FYLMDRTIAYYN-KADVVVAPSQKM 144 (339)
T ss_dssp CTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHCG--GG-----GGGHHHHHHHHT-TCSEEEESCHHH
T ss_pred CCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhCc--cc-----hhhHHHHHHHHH-HCCEEEECCHHH
Confidence 459999999987532 2121234444556 999999987543211 11 111225677776 799999999988
Q ss_pred hhcC-----CCcEEeeCCC-CCCCCCCCcchhhHhhhCcCCCCcEEEEEeeccCccCHHHHHHHHHHhhccCCCcEEEEE
Q 003992 496 QDLP-----KSVICNVHGV-NPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVF 569 (781)
Q Consensus 496 k~l~-----~kivvi~nGV-D~~~f~p~~~~~~r~~~Gi~~~~~~ILfVGRL~~~KGid~LLeA~~~L~~~~p~i~LvIV 569 (781)
++.. ....+++.++ |.. .+.. ...+...+.++|+|++.....+ ..+ .++++|+|+
T Consensus 145 ~~~l~~~G~~~~ki~~~~~~~~~--~~~~-------~~~~~~~~~i~yaG~l~k~~~L-------~~l---~~~~~f~iv 205 (339)
T 3rhz_A 145 IDKLRDFGMNVSKTVVQGMWDHP--TQAP-------MFPAGLKREIHFPGNPERFSFV-------KEW---KYDIPLKVY 205 (339)
T ss_dssp HHHHHHTTCCCSEEEECCSCCCC--CCCC-------CCCCEEEEEEEECSCTTTCGGG-------GGC---CCSSCEEEE
T ss_pred HHHHHHcCCCcCceeecCCCCcc--Cccc-------ccccCCCcEEEEeCCcchhhHH-------HhC---CCCCeEEEE
Confidence 7632 1112223332 211 0100 0112235789999999953222 122 378999999
Q ss_pred eCCCCHHHHHHHHHhcCCcEEEcCCCCCHH--HHHhcccEEEEcc-C------CCCChHHHHHHHHhCCcEEEeCCCCcc
Q 003992 570 GNGEDAYEVQSAAKRLDLNLNFQKGRDHAD--DSLHGYKVFINPS-I------SDVLCTATAEALAMGKFVICADHPSNE 640 (781)
Q Consensus 570 G~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e--~ly~~ADVfVlPS-~------~EgfGlviLEAMA~G~PVVaSd~gg~g 640 (781)
|+|++. +++ +|.|+|+++..+ .+|+.+|+.++.. . ....|.+++||||||+|||+++.++..
T Consensus 206 G~G~~~--------~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~ 276 (339)
T 3rhz_A 206 TWQNVE--------LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQ 276 (339)
T ss_dssp ESCCCC--------CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTT
T ss_pred eCCccc--------CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHH
Confidence 999985 244 699999999887 7887888777651 1 124689999999999999999998875
Q ss_pred ee-ecCCccccCCCHHHHHHHHHHHHhCCCCCCCh-----HHHHcCCHHHHHHHH
Q 003992 641 FF-RSFPNCLTYKTSEDFVARVKEALANDPQPLTP-----EQRYNLSWEAATQRF 689 (781)
Q Consensus 641 ~L-~~~~ngv~~~D~eeLa~aI~~LL~d~~~r~~m-----~~~~~fSWe~iaerl 689 (781)
.+ ....+|+..++.++++++|..+.. +.+.+| +.++.++|...+++.
T Consensus 277 ~~v~~~~~G~~~~~~~e~~~~i~~l~~--~~~~~m~~na~~~a~~~~~~~f~k~~ 329 (339)
T 3rhz_A 277 ELIENNGLGWIVKDVEEAIMKVKNVNE--DEYIELVKNVRSFNPILRKGFFTRRL 329 (339)
T ss_dssp HHHHHHTCEEEESSHHHHHHHHHHCCH--HHHHHHHHHHHHHTHHHHTTHHHHHH
T ss_pred HHHHhCCeEEEeCCHHHHHHHHHHhCH--HHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 44 446667777889999999998643 345555 223345555554443
No 36
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.59 E-value=1.6e-14 Score=158.35 Aligned_cols=249 Identities=9% Similarity=-0.026 Sum_probs=130.8
Q ss_pred hHHhhcccCCCcEEEECCCchhHHHHHHHHHHhhcC-CEEEEEECCcHHHHHHhhcchhHHHHHHHHHHHHHHhc-----
Q 003992 411 DTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAY----- 484 (781)
Q Consensus 411 ~L~k~I~~~kPDVIhl~~P~~l~~~~~g~~~akk~~-pvV~ivHt~y~~y~~~~~~~~~~~~l~k~l~r~l~r~~----- 484 (781)
.+.+++++++||+||.+.....+ ...++..+ |++.+.|+....... .......+..++.+..
T Consensus 114 ~l~~~~~~~~pDlVv~d~~~~~~-----~~~a~~~giP~v~~~~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~ 181 (398)
T 4fzr_A 114 EALALAERWKPDLVLTETYSLTG-----PLVAATLGIPWIEQSIRLASPELI-------KSAGVGELAPELAELGLTDFP 181 (398)
T ss_dssp HHHHHHHHHCCSEEEEETTCTHH-----HHHHHHHTCCEEEECCSSCCCHHH-------HHHHHHHTHHHHHTTTCSSCC
T ss_pred HHHHHHHhCCCCEEEECccccHH-----HHHHHhhCCCEEEeccCCCCchhh-------hHHHHHHHHHHHHHcCCCCCC
Confidence 57778888999999976533222 34556667 988887764211100 0111222233333311
Q ss_pred -CCEEEEcChhhhhcCCCcEEeeCCCC-CCCCCCC-cchhhHhhhCc-CCCCcEEEEEeeccCcc----------CHHHH
Q 003992 485 -CDKVLRLSAATQDLPKSVICNVHGVN-PKFLQIG-EKVATDREQGQ-QAFSKGAYFLGKMVWAK----------GYREL 550 (781)
Q Consensus 485 -aD~VI~vS~~~k~l~~kivvi~nGVD-~~~f~p~-~~~~~r~~~Gi-~~~~~~ILfVGRL~~~K----------Gid~L 550 (781)
.+..+............ .+.+ ..+.... ........... .....+++++|++...| .+..+
T Consensus 182 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~ 256 (398)
T 4fzr_A 182 DPLLSIDVCPPSMEAQPK-----PGTTKMRYVPYNGRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQAL 256 (398)
T ss_dssp CCSEEEECSCGGGC---------CCCEECCCCCCCCSSCCCCHHHHSCCSSCEEECC----------------CCSHHHH
T ss_pred CCCeEEEeCChhhCCCCC-----CCCCCeeeeCCCCCCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHH
Confidence 24445444322221110 0111 1111100 00001111111 12345566889997554 46666
Q ss_pred HHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHhcccEEEEccCCCCChHHHHHHHHhCCc
Q 003992 551 IDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKF 630 (781)
Q Consensus 551 LeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~ADVfVlPS~~EgfGlviLEAMA~G~P 630 (781)
++++.++ +++++++|+|+..+.+. ...-+|.++|+++ ..++|..||+||. .+.+.+++|||+||+|
T Consensus 257 ~~al~~~-----~~~~v~~~~~~~~~~l~----~~~~~v~~~~~~~-~~~ll~~ad~~v~----~gG~~t~~Ea~~~G~P 322 (398)
T 4fzr_A 257 SQELPKL-----GFEVVVAVSDKLAQTLQ----PLPEGVLAAGQFP-LSAIMPACDVVVH----HGGHGTTLTCLSEGVP 322 (398)
T ss_dssp HHHGGGG-----TCEEEECCCC------------CCTTEEEESCCC-HHHHGGGCSEEEE----CCCHHHHHHHHHTTCC
T ss_pred HHHHHhC-----CCEEEEEeCCcchhhhc----cCCCcEEEeCcCC-HHHHHhhCCEEEe----cCCHHHHHHHHHhCCC
Confidence 6666543 57899998887654443 2333499999985 4579999999994 5568999999999999
Q ss_pred EEEeCCCC----cc-eeecCCcccc--CC--CHHHHHHHHHHHHhCCCCCCCh-----HHHHcCCHHHHHHHHH
Q 003992 631 VICADHPS----NE-FFRSFPNCLT--YK--TSEDFVARVKEALANDPQPLTP-----EQRYNLSWEAATQRFI 690 (781)
Q Consensus 631 VVaSd~gg----~g-~L~~~~ngv~--~~--D~eeLa~aI~~LL~d~~~r~~m-----~~~~~fSWe~iaerll 690 (781)
+|+...++ +. .+.....|+. .+ |+++++++|.++++|+..+.+| +.....+|+.+++.+.
T Consensus 323 ~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 396 (398)
T 4fzr_A 323 QVSVPVIAEVWDSARLLHAAGAGVEVPWEQAGVESVLAACARIRDDSSYVGNARRLAAEMATLPTPADIVRLIE 396 (398)
T ss_dssp EEECCCSGGGHHHHHHHHHTTSEEECC-------CHHHHHHHHHHCTHHHHHHHHHHHHHTTSCCHHHHHHHHT
T ss_pred EEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHcCCCHHHHHHHHh
Confidence 99975542 22 1222333332 33 7899999999999999877777 2345678888777654
No 37
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.51 E-value=5.8e-14 Score=154.03 Aligned_cols=148 Identities=11% Similarity=-0.010 Sum_probs=99.5
Q ss_pred CcEEEEEeeccCc-cCHHHHHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHhcccEEEE
Q 003992 532 SKGAYFLGKMVWA-KGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVFIN 610 (781)
Q Consensus 532 ~~~ILfVGRL~~~-KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~ADVfVl 610 (781)
..+++++|++... ++.+.+.+++..+.+. +++++++|+|++.+.++ ...-+|.+.|++ +..++|..||+||.
T Consensus 233 ~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~--~~~~v~~~g~~~~~~l~----~~~~~v~~~~~~-~~~~ll~~ad~~v~ 305 (398)
T 3oti_A 233 PEVAITMGTIELQAFGIGAVEPIIAAAGEV--DADFVLALGDLDISPLG----TLPRNVRAVGWT-PLHTLLRTCTAVVH 305 (398)
T ss_dssp CEEEECCTTTHHHHHCGGGHHHHHHHHHTS--SSEEEEECTTSCCGGGC----SCCTTEEEESSC-CHHHHHTTCSEEEE
T ss_pred CEEEEEcCCCccccCcHHHHHHHHHHHHcC--CCEEEEEECCcChhhhc----cCCCcEEEEccC-CHHHHHhhCCEEEE
Confidence 3456678998554 3444444444444332 68999999887654332 223349999999 55579999999994
Q ss_pred ccCCCCChHHHHHHHHhCCcEEEe----CCCCcc--eee-cCCccccC--C--CHHHHHHHHHHHHhCCCCCCCh-----
Q 003992 611 PSISDVLCTATAEALAMGKFVICA----DHPSNE--FFR-SFPNCLTY--K--TSEDFVARVKEALANDPQPLTP----- 674 (781)
Q Consensus 611 PS~~EgfGlviLEAMA~G~PVVaS----d~gg~g--~L~-~~~ngv~~--~--D~eeLa~aI~~LL~d~~~r~~m----- 674 (781)
.+.+.+++|||++|+|+|+. +.+.+. ..+ ....|+.. . ++++++ ++++|+..+.+|
T Consensus 306 ----~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~----~ll~~~~~~~~~~~~~~ 377 (398)
T 3oti_A 306 ----HGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLR----RLIGDESLRTAAREVRE 377 (398)
T ss_dssp ----CCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHH----HHHHCHHHHHHHHHHHH
T ss_pred ----CCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHH----HHHcCHHHHHHHHHHHH
Confidence 45678999999999999995 334444 322 23334333 2 455555 888898777776
Q ss_pred HHHHcCCHHHHHHHHHHHhh
Q 003992 675 EQRYNLSWEAATQRFIEYSE 694 (781)
Q Consensus 675 ~~~~~fSWe~iaerll~~Ye 694 (781)
+.....+|+.+++.+.+.+.
T Consensus 378 ~~~~~~~~~~~~~~l~~l~~ 397 (398)
T 3oti_A 378 EMVALPTPAETVRRIVERIS 397 (398)
T ss_dssp HHHTSCCHHHHHHHHHHHHC
T ss_pred HHHhCCCHHHHHHHHHHHhc
Confidence 34567899999988877653
No 38
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.48 E-value=2.7e-12 Score=139.60 Aligned_cols=149 Identities=13% Similarity=0.038 Sum_probs=100.7
Q ss_pred CcEEEEEeeccCcc--CHHHHHHHHHHhhccCCCcEEEE-EeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHhcccEE
Q 003992 532 SKGAYFLGKMVWAK--GYRELIDLLAKHKNDLDGFKLDV-FGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVF 608 (781)
Q Consensus 532 ~~~ILfVGRL~~~K--Gid~LLeA~~~L~~~~p~i~LvI-VG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~ADVf 608 (781)
..++++.|++...+ .+..+++++.. .+ +++++ +|++++.+.++. ..-+|.++|++++. ++|..||++
T Consensus 232 ~~v~v~~G~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~g~~~~~~~~~~----~~~~v~~~~~~~~~-~ll~~ad~~ 301 (402)
T 3ia7_A 232 PVLLVSLGNQFNEHPEFFRACAQAFAD----TP-WHVVMAIGGFLDPAVLGP----LPPNVEAHQWIPFH-SVLAHARAC 301 (402)
T ss_dssp CEEEEECCSCSSCCHHHHHHHHHHHTT----SS-CEEEEECCTTSCGGGGCS----CCTTEEEESCCCHH-HHHTTEEEE
T ss_pred CEEEEECCCCCcchHHHHHHHHHHHhc----CC-cEEEEEeCCcCChhhhCC----CCCcEEEecCCCHH-HHHhhCCEE
Confidence 44567888887665 34444444432 23 55555 676655543322 23349999999988 799999999
Q ss_pred EEccCCCCChHHHHHHHHhCCcEEEeCC-CC----cc-eeecCCccccC--C--CHHHHHHHHHHHHhCCCCCCCh----
Q 003992 609 INPSISDVLCTATAEALAMGKFVICADH-PS----NE-FFRSFPNCLTY--K--TSEDFVARVKEALANDPQPLTP---- 674 (781)
Q Consensus 609 VlPS~~EgfGlviLEAMA~G~PVVaSd~-gg----~g-~L~~~~ngv~~--~--D~eeLa~aI~~LL~d~~~r~~m---- 674 (781)
|..+ ...+++|||++|+|+|+... .+ +. .+.....++.. + |+++++++|.++++|+..+.++
T Consensus 302 v~~~----G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~~~~~~~~~~~ 377 (402)
T 3ia7_A 302 LTHG----TTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPASIREAVERLAADSAVRERVRRMQ 377 (402)
T ss_dssp EECC----CHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGCSHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred EECC----CHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCCCHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 9765 34788999999999997755 32 21 12222333222 2 8999999999999998766666
Q ss_pred -HHHHcCCHHHHHHHHHHHhh
Q 003992 675 -EQRYNLSWEAATQRFIEYSE 694 (781)
Q Consensus 675 -~~~~~fSWe~iaerll~~Ye 694 (781)
......+++.+++.+.+.+.
T Consensus 378 ~~~~~~~~~~~~~~~i~~~~~ 398 (402)
T 3ia7_A 378 RDILSSGGPARAADEVEAYLG 398 (402)
T ss_dssp HHHHTSCHHHHHHHHHHHHHH
T ss_pred HHHhhCChHHHHHHHHHHHHh
Confidence 23456788888888887775
No 39
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.44 E-value=8.8e-12 Score=136.87 Aligned_cols=149 Identities=14% Similarity=0.094 Sum_probs=97.9
Q ss_pred CcEEEEEeeccCccC--HHHHHHHHHHhhccCCCcEEEE-EeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHhcccEE
Q 003992 532 SKGAYFLGKMVWAKG--YRELIDLLAKHKNDLDGFKLDV-FGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVF 608 (781)
Q Consensus 532 ~~~ILfVGRL~~~KG--id~LLeA~~~L~~~~p~i~LvI-VG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~ADVf 608 (781)
..++++.|++....+ +..+++++. ..+ +++++ +|.+++.+.++ ...-+|.+.|++++. ++|..||++
T Consensus 248 ~~v~v~~Gs~~~~~~~~~~~~~~al~----~~~-~~~v~~~g~~~~~~~l~----~~~~~v~~~~~~~~~-~ll~~ad~~ 317 (415)
T 3rsc_A 248 PVVLVSLGTTFNDRPGFFRDCARAFD----GQP-WHVVMTLGGQVDPAALG----DLPPNVEAHRWVPHV-KVLEQATVC 317 (415)
T ss_dssp CEEEEECTTTSCCCHHHHHHHHHHHT----TSS-CEEEEECTTTSCGGGGC----CCCTTEEEESCCCHH-HHHHHEEEE
T ss_pred CEEEEECCCCCCChHHHHHHHHHHHh----cCC-cEEEEEeCCCCChHHhc----CCCCcEEEEecCCHH-HHHhhCCEE
Confidence 345567788754432 334444433 223 67766 67666554432 223349999999988 699999999
Q ss_pred EEccCCCCChHHHHHHHHhCCcEEEeCCCC----c-ceeecCCcc--ccCC--CHHHHHHHHHHHHhCCCCCCCh-----
Q 003992 609 INPSISDVLCTATAEALAMGKFVICADHPS----N-EFFRSFPNC--LTYK--TSEDFVARVKEALANDPQPLTP----- 674 (781)
Q Consensus 609 VlPS~~EgfGlviLEAMA~G~PVVaSd~gg----~-g~L~~~~ng--v~~~--D~eeLa~aI~~LL~d~~~r~~m----- 674 (781)
|..+ ...+++|||++|+|+|+....+ + ..+.....+ +..+ ++++++++|.++++|+..+.++
T Consensus 318 v~~~----G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~ 393 (415)
T 3rsc_A 318 VTHG----GMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGAVAADPALLARVEAMRG 393 (415)
T ss_dssp EESC----CHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCCHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred EECC----cHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCCHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 9765 3478999999999999965432 1 111222222 2222 8999999999999998766666
Q ss_pred HHHHcCCHHHHHHHHHHHhh
Q 003992 675 EQRYNLSWEAATQRFIEYSE 694 (781)
Q Consensus 675 ~~~~~fSWe~iaerll~~Ye 694 (781)
.......++.+++.+.+.+.
T Consensus 394 ~~~~~~~~~~~~~~i~~~~~ 413 (415)
T 3rsc_A 394 HVRRAGGAARAADAVEAYLA 413 (415)
T ss_dssp HHHHSCHHHHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHhh
Confidence 23455777888877776654
No 40
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.41 E-value=1e-11 Score=135.17 Aligned_cols=231 Identities=9% Similarity=-0.043 Sum_probs=134.7
Q ss_pred HhHHhhcccCCCcEEEECCCchhHHHHHHHHHHhhcC-CEEEEEECCcHHHHHHhhcchhHHHHHHHHHHHHHHhc----
Q 003992 410 GDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAY---- 484 (781)
Q Consensus 410 ~~L~k~I~~~kPDVIhl~~P~~l~~~~~g~~~akk~~-pvV~ivHt~y~~y~~~~~~~~~~~~l~k~l~r~l~r~~---- 484 (781)
..+.+.+++++||+||++..... +...++.++ |++.+.|+.... ......+...++++..+..
T Consensus 97 ~~l~~~l~~~~pD~Vi~~~~~~~-----~~~~a~~~giP~v~~~~~~~~~-------~~~~~~~~~~~~~~~~~~g~~~~ 164 (384)
T 2p6p_A 97 PRMLDFSRAWRPDLIVGGTMSYV-----APLLALHLGVPHARQTWDAVDA-------DGIHPGADAELRPELSELGLERL 164 (384)
T ss_dssp HHHHHHHHHHCCSEEEEETTCTH-----HHHHHHHHTCCEEEECCSSCCC-------TTTHHHHHHHTHHHHHHTTCSSC
T ss_pred HHHHHHHhccCCcEEEECcchhh-----HHHHHHhcCCCEEEeccCCccc-------chhhHHHHHHHHHHHHHcCCCCC
Confidence 35667778889999998754221 134566677 988776643210 0001112222333333311
Q ss_pred --CCEEEEcChhhhhcCCCc---EEeeCCCCCCCCCCCcchhhHhhhCc-CCCCcEEEEEeeccCc-------cCHHHHH
Q 003992 485 --CDKVLRLSAATQDLPKSV---ICNVHGVNPKFLQIGEKVATDREQGQ-QAFSKGAYFLGKMVWA-------KGYRELI 551 (781)
Q Consensus 485 --aD~VI~vS~~~k~l~~ki---vvi~nGVD~~~f~p~~~~~~r~~~Gi-~~~~~~ILfVGRL~~~-------KGid~LL 551 (781)
++.+++.+....+.+... .+.+.+.+. +.... ..... ++...+++++|++... +.+..++
T Consensus 165 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~ 237 (384)
T 2p6p_A 165 PAPDLFIDICPPSLRPANAAPARMMRHVATSR----QCPLE---PWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLA 237 (384)
T ss_dssp CCCSEEEECSCGGGSCTTSCCCEECCCCCCCC----CCBCC---HHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHH
T ss_pred CCCCeEEEECCHHHCCCCCCCCCceEecCCCC----CCCCC---chhhcCCCCCEEEEECCCCCccccccccHHHHHHHH
Confidence 577887776443322111 001111110 11111 11111 1224466789998865 6788888
Q ss_pred HHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHhcccEEEEccCCCCChHHHHHHHHhCCcE
Q 003992 552 DLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFV 631 (781)
Q Consensus 552 eA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PV 631 (781)
+++.++ ++++++++++++.+.++. ..-+|.+ |+++. .++|..||+||..+ .+++++|||++|+|+
T Consensus 238 ~al~~~-----~~~~~~~~g~~~~~~l~~----~~~~v~~-~~~~~-~~~l~~~d~~v~~~----G~~t~~Ea~~~G~P~ 302 (384)
T 2p6p_A 238 KDLVRW-----DVELIVAAPDTVAEALRA----EVPQARV-GWTPL-DVVAPTCDLLVHHA----GGVSTLTGLSAGVPQ 302 (384)
T ss_dssp HHHHTT-----TCEEEEECCHHHHHHHHH----HCTTSEE-ECCCH-HHHGGGCSEEEECS----CTTHHHHHHHTTCCE
T ss_pred HHHhcC-----CcEEEEEeCCCCHHhhCC----CCCceEE-cCCCH-HHHHhhCCEEEeCC----cHHHHHHHHHhCCCE
Confidence 888653 578888765543333332 2234888 99864 46999999999763 457899999999999
Q ss_pred EEeCCCC----cc-eeecCCccc--cC--CCHHHHHHHHHHHHhCCCCCCCh
Q 003992 632 ICADHPS----NE-FFRSFPNCL--TY--KTSEDFVARVKEALANDPQPLTP 674 (781)
Q Consensus 632 VaSd~gg----~g-~L~~~~ngv--~~--~D~eeLa~aI~~LL~d~~~r~~m 674 (781)
|+....+ +. .+.....|+ .. .++++++++|.++++|+..+.++
T Consensus 303 v~~p~~~dq~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~ 354 (384)
T 2p6p_A 303 LLIPKGSVLEAPARRVADYGAAIALLPGEDSTEAIADSCQELQAKDTYARRA 354 (384)
T ss_dssp EECCCSHHHHHHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCHHHHHHH
T ss_pred EEccCcccchHHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCHHHHHHH
Confidence 9997743 21 122222232 22 27999999999999998766555
No 41
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.34 E-value=5.8e-12 Score=139.48 Aligned_cols=243 Identities=9% Similarity=-0.007 Sum_probs=151.9
Q ss_pred hHhHHhhcccCCCcEEEECCCchhHHHHHHHHHHhhcC-CEEEEEECCcHHHHHHhhcchhHHHHHHHHHHHHHHhcCCE
Q 003992 409 AGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDK 487 (781)
Q Consensus 409 v~~L~k~I~~~kPDVIhl~~P~~l~~~~~g~~~akk~~-pvV~ivHt~y~~y~~~~~~~~~~~~l~k~l~r~l~r~~aD~ 487 (781)
+..+.+++++++||+|++++.....+. ...+++.+ |++ .++.....+ .... -..+++.+....+|.
T Consensus 83 ~~~l~~~l~~~kPD~Vlv~gd~~~~~a---alaA~~~~IPv~-h~eaglrs~-----~~~~----pee~nR~~~~~~a~~ 149 (385)
T 4hwg_A 83 IEKVDEVLEKEKPDAVLFYGDTNSCLS---AIAAKRRKIPIF-HMEAGNRCF-----DQRV----PEEINRKIIDHISDV 149 (385)
T ss_dssp HHHHHHHHHHHCCSEEEEESCSGGGGG---HHHHHHTTCCEE-EESCCCCCS-----CTTS----THHHHHHHHHHHCSE
T ss_pred HHHHHHHHHhcCCcEEEEECCchHHHH---HHHHHHhCCCEE-EEeCCCccc-----cccC----cHHHHHHHHHhhhce
Confidence 346888899999999999875443332 34556667 854 444322111 0000 011233333326899
Q ss_pred EEEcChhhhh-c-----C-CCcEEeeC-CCCCCCCC--CCcchhhHhhhCcCCCCcEEEEEeecc---CccCHHHHHHHH
Q 003992 488 VLRLSAATQD-L-----P-KSVICNVH-GVNPKFLQ--IGEKVATDREQGQQAFSKGAYFLGKMV---WAKGYRELIDLL 554 (781)
Q Consensus 488 VI~vS~~~k~-l-----~-~kivvi~n-GVD~~~f~--p~~~~~~r~~~Gi~~~~~~ILfVGRL~---~~KGid~LLeA~ 554 (781)
++++++..++ + + .++.++.| ++|.-.+. ...+...++++|+++.+.++++.||.. ..|++..+++|+
T Consensus 150 ~~~~te~~~~~l~~~G~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl~~~~~iLvt~hr~e~~~~~~~l~~ll~al 229 (385)
T 4hwg_A 150 NITLTEHARRYLIAEGLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLSLTPKQYFLISSHREENVDVKNNLKELLNSL 229 (385)
T ss_dssp EEESSHHHHHHHHHTTCCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTTCCTTSEEEEEECCC-----CHHHHHHHHHH
T ss_pred eecCCHHHHHHHHHcCCCcCcEEEECCchHHHHHHhhhhcchhHHHHHcCCCcCCEEEEEeCCchhcCcHHHHHHHHHHH
Confidence 9999997654 2 1 24555555 33422111 112334566788766444555666643 447899999999
Q ss_pred HHhhccCCCcEEEEEeCCCCHHHHHHHHHhc-C-C----cEEEcCCCCCHH--HHHhcccEEEEccCCCCChHHHHHHHH
Q 003992 555 AKHKNDLDGFKLDVFGNGEDAYEVQSAAKRL-D-L----NLNFQKGRDHAD--DSLHGYKVFINPSISDVLCTATAEALA 626 (781)
Q Consensus 555 ~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~l-g-L----~V~FlG~v~~~e--~ly~~ADVfVlPS~~EgfGlviLEAMA 626 (781)
.++.+++ ++.+++... | .+++.+++. + + +|.+.++....+ .+|+.||+++.+| |.++.||++
T Consensus 230 ~~l~~~~-~~~vv~p~~-p---~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvvt~S-----Ggv~~EA~a 299 (385)
T 4hwg_A 230 QMLIKEY-NFLIIFSTH-P---RTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILSDS-----GTITEEASI 299 (385)
T ss_dssp HHHHHHH-CCEEEEEEC-H---HHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEEECC-----TTHHHHHHH
T ss_pred HHHHhcC-CeEEEEECC-h---HHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEEECC-----ccHHHHHHH
Confidence 9987655 677766543 3 355555544 3 2 388988777544 8999999999777 446799999
Q ss_pred hCCcEEEeCCCC-cceeecCCccccC-CCHHHHHHHHHHHHhCCCCCCCh
Q 003992 627 MGKFVICADHPS-NEFFRSFPNCLTY-KTSEDFVARVKEALANDPQPLTP 674 (781)
Q Consensus 627 ~G~PVVaSd~gg-~g~L~~~~ngv~~-~D~eeLa~aI~~LL~d~~~r~~m 674 (781)
+|+|||+.+... ..+.+..++++.. .|++++++++.++++|+..+..|
T Consensus 300 lG~Pvv~~~~~ter~e~v~~G~~~lv~~d~~~i~~ai~~ll~d~~~~~~m 349 (385)
T 4hwg_A 300 LNLPALNIREAHERPEGMDAGTLIMSGFKAERVLQAVKTITEEHDNNKRT 349 (385)
T ss_dssp TTCCEEECSSSCSCTHHHHHTCCEECCSSHHHHHHHHHHHHTTCBTTBCC
T ss_pred cCCCEEEcCCCccchhhhhcCceEEcCCCHHHHHHHHHHHHhChHHHHHh
Confidence 999999986533 2222222233434 59999999999999999887776
No 42
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.28 E-value=1.6e-10 Score=128.73 Aligned_cols=148 Identities=11% Similarity=-0.035 Sum_probs=102.2
Q ss_pred cEEEEEeeccC-----ccCHHHHHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHhcccE
Q 003992 533 KGAYFLGKMVW-----AKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKV 607 (781)
Q Consensus 533 ~~ILfVGRL~~-----~KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~ADV 607 (781)
.+++++|++.. .|.+..+++++..+ +++++++++++..+.++ ...-+|.+.|++++ .++|..||+
T Consensus 269 ~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~~~l~----~~~~~v~~~~~~~~-~~ll~~ad~ 338 (441)
T 2yjn_A 269 RVCLTLGISSRENSIGQVSIEELLGAVGDV-----DAEIIATFDAQQLEGVA----NIPDNVRTVGFVPM-HALLPTCAA 338 (441)
T ss_dssp EEEEEC----------CCSTTTTHHHHHTS-----SSEEEECCCTTTTSSCS----SCCSSEEECCSCCH-HHHGGGCSE
T ss_pred EEEEECCCCcccccChHHHHHHHHHHHHcC-----CCEEEEEECCcchhhhc----cCCCCEEEecCCCH-HHHHhhCCE
Confidence 45678899875 48888999998754 57888877766543221 12224999999987 469999999
Q ss_pred EEEccCCCCChHHHHHHHHhCCcEEEeCCCC----cc-eeecCCcc--ccC--CCHHHHHHHHHHHHhCCCCCCCh----
Q 003992 608 FINPSISDVLCTATAEALAMGKFVICADHPS----NE-FFRSFPNC--LTY--KTSEDFVARVKEALANDPQPLTP---- 674 (781)
Q Consensus 608 fVlPS~~EgfGlviLEAMA~G~PVVaSd~gg----~g-~L~~~~ng--v~~--~D~eeLa~aI~~LL~d~~~r~~m---- 674 (781)
||.. +.+.+++|||++|+|+|+....+ +. .+.....| +.. -++++++++|.++++|+..+.+|
T Consensus 339 ~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~ 414 (441)
T 2yjn_A 339 TVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRESVKRVLDDPAHRAGAARMR 414 (441)
T ss_dssp EEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred EEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 9963 55789999999999999997743 11 12222223 222 28999999999999998776666
Q ss_pred -HHHHcCCHHHHHHHHHHHhh
Q 003992 675 -EQRYNLSWEAATQRFIEYSE 694 (781)
Q Consensus 675 -~~~~~fSWe~iaerll~~Ye 694 (781)
.......++.+++.+.+.+.
T Consensus 415 ~~~~~~~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 415 DDMLAEPSPAEVVGICEELAA 435 (441)
T ss_dssp HHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHH
Confidence 23456788888887777665
No 43
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.10 E-value=1.2e-08 Score=112.48 Aligned_cols=149 Identities=14% Similarity=0.017 Sum_probs=93.2
Q ss_pred CcEEEEEeeccCccCHHHHHHHHHHhhccCCCcEE-EEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHhcccEEEE
Q 003992 532 SKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKL-DVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVFIN 610 (781)
Q Consensus 532 ~~~ILfVGRL~~~KGid~LLeA~~~L~~~~p~i~L-vIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~ADVfVl 610 (781)
..++++.|.+. .+..+.+.+++..+.+ .++++ +++|.+.+.+.+. .+.-+|.+.+++++. ++|..||+||.
T Consensus 256 ~~v~v~~Gs~~-~~~~~~~~~~~~al~~--~~~~~~~~~g~~~~~~~~~----~~~~~v~~~~~~~~~-~~l~~~d~~v~ 327 (424)
T 2iya_A 256 PVLLIALGSAF-TDHLDFYRTCLSAVDG--LDWHVVLSVGRFVDPADLG----EVPPNVEVHQWVPQL-DILTKASAFIT 327 (424)
T ss_dssp CEEEEECCSSS-CCCHHHHHHHHHHHTT--CSSEEEEECCTTSCGGGGC----SCCTTEEEESSCCHH-HHHTTCSEEEE
T ss_pred CEEEEEcCCCC-cchHHHHHHHHHHHhc--CCcEEEEEECCcCChHHhc----cCCCCeEEecCCCHH-HHHhhCCEEEE
Confidence 34556788876 3333433333333332 45677 4568776544331 223349999999887 69999999996
Q ss_pred ccCCCCChHHHHHHHHhCCcEEEeCCCCc-----ceeecCCccccC----CCHHHHHHHHHHHHhCCCCCCChH-----H
Q 003992 611 PSISDVLCTATAEALAMGKFVICADHPSN-----EFFRSFPNCLTY----KTSEDFVARVKEALANDPQPLTPE-----Q 676 (781)
Q Consensus 611 PS~~EgfGlviLEAMA~G~PVVaSd~gg~-----g~L~~~~ngv~~----~D~eeLa~aI~~LL~d~~~r~~m~-----~ 676 (781)
. +..++++|||++|+|+|+....+. ..+.....|+.. -++++++++|.++++|+..+.++. .
T Consensus 328 ~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~ 403 (424)
T 2iya_A 328 H----AGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVLAVASDPGVAERLAAVRQEI 403 (424)
T ss_dssp C----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred C----CchhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 4 345899999999999999976521 112222223222 289999999999999886555541 1
Q ss_pred HHcCCHHHHHHHHHHH
Q 003992 677 RYNLSWEAATQRFIEY 692 (781)
Q Consensus 677 ~~~fSWe~iaerll~~ 692 (781)
......+.+++.+.+.
T Consensus 404 ~~~~~~~~~~~~i~~~ 419 (424)
T 2iya_A 404 REAGGARAAADILEGI 419 (424)
T ss_dssp HTSCHHHHHHHHHHHH
T ss_pred HhcCcHHHHHHHHHHH
Confidence 2233445555544444
No 44
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.04 E-value=4.3e-09 Score=116.23 Aligned_cols=147 Identities=10% Similarity=-0.023 Sum_probs=95.6
Q ss_pred CcEEEEEeecc-CccCHHHHHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHhcccEEEE
Q 003992 532 SKGAYFLGKMV-WAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVFIN 610 (781)
Q Consensus 532 ~~~ILfVGRL~-~~KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~ADVfVl 610 (781)
+.++++.|++. ..+.+..+++++.++ ++++++++++...+.+ ...-+|.+.++++. .++|..||+||.
T Consensus 222 ~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~vv~~~g~~~~~~~-----~~~~~v~~~~~~~~-~~ll~~~d~~v~ 290 (404)
T 3h4t_A 222 PPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRRVVLSSGWAGLGRI-----DEGDDCLVVGEVNH-QVLFGRVAAVVH 290 (404)
T ss_dssp CCEEECCTTSCCCTTHHHHHHHHHHHT-----TCCEEEECTTTTCCCS-----SCCTTEEEESSCCH-HHHGGGSSEEEE
T ss_pred CeEEEECCCCCCcHHHHHHHHHHHHhC-----CCEEEEEeCCcccccc-----cCCCCEEEecCCCH-HHHHhhCcEEEE
Confidence 45566788887 677788888888765 4566666544332111 12224999999887 459999999995
Q ss_pred ccCCCCChHHHHHHHHhCCcEEEeCCCCc-----ceeecCCcc--ccC--CCHHHHHHHHHHHHhCCCCCCCh-HHHHcC
Q 003992 611 PSISDVLCTATAEALAMGKFVICADHPSN-----EFFRSFPNC--LTY--KTSEDFVARVKEALANDPQPLTP-EQRYNL 680 (781)
Q Consensus 611 PS~~EgfGlviLEAMA~G~PVVaSd~gg~-----g~L~~~~ng--v~~--~D~eeLa~aI~~LL~d~~~r~~m-~~~~~f 680 (781)
.+ ...++.|||++|+|+|+....+. ..+...+.+ +.. -+++++.++|.++++ +..+.+| +....+
T Consensus 291 ~g----G~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~ 365 (404)
T 3h4t_A 291 HG----GAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALATALT-PGIRARAAAVAGTI 365 (404)
T ss_dssp CC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTS-HHHHHHHHHHHTTC
T ss_pred CC----cHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHHHHHHHHhC-HHHHHHHHHHHHHH
Confidence 44 45789999999999999866543 111111222 222 379999999999998 6655555 233333
Q ss_pred ---CHHHHHHHHHHHhh
Q 003992 681 ---SWEAATQRFIEYSE 694 (781)
Q Consensus 681 ---SWe~iaerll~~Ye 694 (781)
.++.+++.+++.+.
T Consensus 366 ~~~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 366 RTDGTTVAAKLLLEAIS 382 (404)
T ss_dssp CCCHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHh
Confidence 45555555555444
No 45
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.01 E-value=2.4e-10 Score=124.39 Aligned_cols=130 Identities=15% Similarity=0.036 Sum_probs=78.7
Q ss_pred EEEEEeeccCccC-HHHHHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHhcccEEEEcc
Q 003992 534 GAYFLGKMVWAKG-YRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVFINPS 612 (781)
Q Consensus 534 ~ILfVGRL~~~KG-id~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~ADVfVlPS 612 (781)
+++..|.+...++ ...+.+++..+.+ .+..+++.+.+...+.. ..+.-+|.+.++++.. ++|..+|+||
T Consensus 240 v~vs~Gs~~~~~~~~~~~~~~~~~l~~--~~~~~v~~~~~~~~~~~----~~~~~~v~~~~~~p~~-~lL~~~~~~v--- 309 (400)
T 4amg_A 240 IAVTLGSIDALSGGIAKLAPLFSEVAD--VDAEFVLTLGGGDLALL----GELPANVRVVEWIPLG-ALLETCDAII--- 309 (400)
T ss_dssp EEECCCSCC--CCSSSTTHHHHHHGGG--SSSEEEEECCTTCCCCC----CCCCTTEEEECCCCHH-HHHTTCSEEE---
T ss_pred EEEeCCcccccCccHHHHHHHHHHhhc--cCceEEEEecCcccccc----ccCCCCEEEEeecCHH-HHhhhhhhee---
Confidence 4456777765443 3344444444433 35667766655433211 1122238899998765 4999999999
Q ss_pred CCCCChHHHHHHHHhCCcEEEeCCCCc----c-eeecCCccccCCCHHHHHHHHHHHHhCCCCCCCh
Q 003992 613 ISDVLCTATAEALAMGKFVICADHPSN----E-FFRSFPNCLTYKTSEDFVARVKEALANDPQPLTP 674 (781)
Q Consensus 613 ~~EgfGlviLEAMA~G~PVVaSd~gg~----g-~L~~~~ngv~~~D~eeLa~aI~~LL~d~~~r~~m 674 (781)
+.+..++++|||++|+|+|+....+. . .+...+.++...+.+..+++|.++|+|+..+.+.
T Consensus 310 -~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~al~~lL~d~~~r~~a 375 (400)
T 4amg_A 310 -HHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAEAGSLGAEQCRRLLDDAGLREAA 375 (400)
T ss_dssp -ECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECCTTTCSHHHHHHHHHCHHHHHHH
T ss_pred -ccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcCCCCchHHHHHHHHcCHHHHHHH
Confidence 44567899999999999999766542 1 1222233344455566788999999998655443
No 46
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=98.89 E-value=1.9e-09 Score=125.08 Aligned_cols=252 Identities=10% Similarity=0.003 Sum_probs=154.9
Q ss_pred HhHHhhcccCCCcEEEECCCchhHHHHHHHHHHhhcC-CEEEEEECCcHHHHHHhhcchhHHHHHHHHHHHHHHhcCCEE
Q 003992 410 GDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKV 488 (781)
Q Consensus 410 ~~L~k~I~~~kPDVIhl~~P~~l~~~~~g~~~akk~~-pvV~ivHt~y~~y~~~~~~~~~~~~l~k~l~r~l~r~~aD~V 488 (781)
..+.+.|++.++||++--+..... .. ...+.... |+-.++-. | ....+. ...|.+
T Consensus 339 ~~ia~~Ir~d~IDILVdL~g~t~~-~~--i~~aa~RpAPVQvs~lG-y---p~TTGl-----------------~~iDY~ 394 (631)
T 3q3e_A 339 EFIRSVCESNGAAIFYMPSIGMDM-TT--IFASNTRLAPIQAIALG-H---PATTHS-----------------DFIEYV 394 (631)
T ss_dssp HHHHHHHHHHTCSEEEESCCSSSH-HH--HHHTTSCCSSEEEEECS-S---CSCCCC-----------------TTCCEE
T ss_pred HHHHHHHHhcCCCEEEECCCCCCc-hh--HHHHhCCCchheEeccC-C---CcccCc-----------------ccCCEE
Confidence 457888999999999864433211 11 22222223 87666543 1 111111 136777
Q ss_pred EEcChh---hhhcCCCcEEeeCCC---CCCCCCCCcchhhHhhhCcCCCCcEEEEEeeccCccCHHHHHHHHHHhhccCC
Q 003992 489 LRLSAA---TQDLPKSVICNVHGV---NPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLD 562 (781)
Q Consensus 489 I~vS~~---~k~l~~kivvi~nGV---D~~~f~p~~~~~~r~~~Gi~~~~~~ILfVGRL~~~KGid~LLeA~~~L~~~~p 562 (781)
|+-... ...+.++++..++.. +|....+ .+..++++.+.-.++|.+--...|....+++++.++.++.|
T Consensus 395 i~D~~~~~~~~~ysEklirLP~~~~~~~p~~~~p-----~r~~~~lp~~~G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP 469 (631)
T 3q3e_A 395 IVEDDYVGSEECFSETLLRLPKDALPYVPSALAP-----EKVDYLLRENPEVVNIGIASTTMKLNPYFLEALKAIRDRAK 469 (631)
T ss_dssp EEEGGGCCCGGGCSSEEEEECTTSSCCCCCTTCC-----SSCCCCCCSCCSEEEEEEEECSTTCCHHHHHHHHHHHHHCS
T ss_pred EeCCCCCCcccCceeeEEECCCCccccCCcccCC-----ccccccCCcCCCeEEEEECCccccCCHHHHHHHHHHHHhCC
Confidence 764321 112344556666522 2221111 13345555432233333333467999999999999999989
Q ss_pred CcEEE--EEeC--CCCHHHHHHHHHhcCCc--EEEcCCCCCHH--HHHhcccEEEEccCCCCChHHHHHHHHhCCcEEEe
Q 003992 563 GFKLD--VFGN--GEDAYEVQSAAKRLDLN--LNFQKGRDHAD--DSLHGYKVFINPSISDVLCTATAEALAMGKFVICA 634 (781)
Q Consensus 563 ~i~Lv--IVG~--Gp~~~~L~~~a~~lgL~--V~FlG~v~~~e--~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaS 634 (781)
+..+. ++|+ |.....++ .+.+.|+. |.|+|..+..+ ..|+.+|||+.|+.+.| |++++|||+||+|||+.
T Consensus 470 ~s~L~l~~~g~~~g~~~~~~~-~~~~~GI~~Rv~F~g~~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmGVPVVTl 547 (631)
T 3q3e_A 470 VKVHFHFALGQSNGITHPYVE-RFIKSYLGDSATAHPHSPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLGLVGVCK 547 (631)
T ss_dssp SEEEEEEEESSCCGGGHHHHH-HHHHHHHGGGEEEECCCCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTTCCEEEE
T ss_pred CcEEEEEecCCCchhhHHHHH-HHHHcCCCccEEEcCCCCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcCCCEEec
Confidence 87664 3674 33344443 44556774 99999999777 88999999999997755 99999999999999997
Q ss_pred CCCCc------ceeec-CCcc-ccCCCHHHHHHHHHHHHhCCCCCCChH-H-------HHcCCHHHHHHHHHHHhh
Q 003992 635 DHPSN------EFFRS-FPNC-LTYKTSEDFVARVKEALANDPQPLTPE-Q-------RYNLSWEAATQRFIEYSE 694 (781)
Q Consensus 635 d~gg~------g~L~~-~~ng-v~~~D~eeLa~aI~~LL~d~~~r~~m~-~-------~~~fSWe~iaerll~~Ye 694 (781)
..++. +.+.. +-.. +...|.+++++...++.+|++.+..+. . ...|+ ..+++|.+.|+
T Consensus 548 ~G~~~asRvgaSlL~~~GLpE~LIA~d~eeYv~~Av~La~D~~~l~~LR~~Lr~~~~~spLFd--~~~~~~e~~ye 621 (631)
T 3q3e_A 548 TGAEVHEHIDEGLFKRLGLPEWLIANTVDEYVERAVRLAENHQERLELRRYIIENNGLNTLFT--GDPRPMGQVFL 621 (631)
T ss_dssp CCSSHHHHHHHHHHHHTTCCGGGEESSHHHHHHHHHHHHHCHHHHHHHHHHHHHSCCHHHHTC--SCCTHHHHHHH
T ss_pred cCCcHHHHhHHHHHHhcCCCcceecCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhhCCCcc--hhHHHHHHHHH
Confidence 65532 11111 2122 355889999999999999998877771 1 12233 44566666666
No 47
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.85 E-value=9.1e-08 Score=105.62 Aligned_cols=150 Identities=12% Similarity=-0.007 Sum_probs=99.5
Q ss_pred CcEEEEEeec-cCccCHHHHHHHHHHhhccCCCcEEEEE-eCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHhcccEEE
Q 003992 532 SKGAYFLGKM-VWAKGYRELIDLLAKHKNDLDGFKLDVF-GNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVFI 609 (781)
Q Consensus 532 ~~~ILfVGRL-~~~KGid~LLeA~~~L~~~~p~i~LvIV-G~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~ADVfV 609 (781)
..++++.|++ ...+.++.+++++..+ +.+++++ |.+... . ....-+|.+.+++++. ++|..||+||
T Consensus 239 ~~v~v~~Gs~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~~--~----~~~~~~v~~~~~~~~~-~~l~~~d~~v 306 (415)
T 1iir_A 239 PPVYLGFGSLGAPADAVRVAIDAIRAH-----GRRVILSRGWADLV--L----PDDGADCFAIGEVNHQ-VLFGRVAAVI 306 (415)
T ss_dssp CCEEEECC---CCHHHHHHHHHHHHHT-----TCCEEECTTCTTCC--C----SSCGGGEEECSSCCHH-HHGGGSSEEE
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHC-----CCeEEEEeCCCccc--c----cCCCCCEEEeCcCChH-HHHhhCCEEE
Confidence 4566788998 5888888999998875 2345554 765432 1 1111239999999875 5899999999
Q ss_pred EccCCCCChHHHHHHHHhCCcEEEeCCCCc----c-eeecCCccccC----CCHHHHHHHHHHHHhCCCCCCCh-HHHHc
Q 003992 610 NPSISDVLCTATAEALAMGKFVICADHPSN----E-FFRSFPNCLTY----KTSEDFVARVKEALANDPQPLTP-EQRYN 679 (781)
Q Consensus 610 lPS~~EgfGlviLEAMA~G~PVVaSd~gg~----g-~L~~~~ngv~~----~D~eeLa~aI~~LL~d~~~r~~m-~~~~~ 679 (781)
.. +...+++|||++|+|+|+....+. . .+.....|+.. -+.++++++|.++ +|+..+.++ +.+..
T Consensus 307 ~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~ 381 (415)
T 1iir_A 307 HH----GGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATA-LTPETHARATAVAGT 381 (415)
T ss_dssp EC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHH-TSHHHHHHHHHHHHH
T ss_pred eC----CChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHHHHHHHHH-cCHHHHHHHHHHHHH
Confidence 64 345899999999999999877542 1 12122222222 3899999999999 887655555 34455
Q ss_pred CCHHHHHHHHHHHhhhccccc
Q 003992 680 LSWEAATQRFIEYSELNRILN 700 (781)
Q Consensus 680 fSWe~iaerll~~Ye~~~vl~ 700 (781)
+.....+++..+..+ +++.
T Consensus 382 ~~~~~~~~~~~~~i~--~~~~ 400 (415)
T 1iir_A 382 IRTDGAAVAARLLLD--AVSR 400 (415)
T ss_dssp SCSCHHHHHHHHHHH--HHHT
T ss_pred HhhcChHHHHHHHHH--HHHh
Confidence 555666667766666 5543
No 48
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=98.77 E-value=7.3e-09 Score=100.16 Aligned_cols=121 Identities=18% Similarity=0.138 Sum_probs=87.9
Q ss_pred CcEEEEEeecc---CccCHHHHHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHH--hccc
Q 003992 532 SKGAYFLGKMV---WAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSL--HGYK 606 (781)
Q Consensus 532 ~~~ILfVGRL~---~~KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly--~~AD 606 (781)
..+++++|++. ..|++..+++++.++ +.+++++++|+..+ .+.-+|.+.|++++. +++ ..||
T Consensus 22 ~~vlv~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~~~~~-------~~~~~v~~~~~~~~~-~~l~~~~ad 88 (170)
T 2o6l_A 22 GVVVFSLGSMVSNMTEERANVIASALAQI-----PQKVLWRFDGNKPD-------TLGLNTRLYKWIPQN-DLLGHPKTR 88 (170)
T ss_dssp CEEEEECCSCCTTCCHHHHHHHHHHHTTS-----SSEEEEECCSSCCT-------TCCTTEEEESSCCHH-HHHTSTTEE
T ss_pred CEEEEECCCCcccCCHHHHHHHHHHHHhC-----CCeEEEEECCcCcc-------cCCCcEEEecCCCHH-HHhcCCCcC
Confidence 45667899985 678888888888653 36788887766432 122349999999885 467 8999
Q ss_pred EEEEccCCCCChHHHHHHHHhCCcEEEeCCCCc----c-eeecCCccccC--C--CHHHHHHHHHHHHhCCC
Q 003992 607 VFINPSISDVLCTATAEALAMGKFVICADHPSN----E-FFRSFPNCLTY--K--TSEDFVARVKEALANDP 669 (781)
Q Consensus 607 VfVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~----g-~L~~~~ngv~~--~--D~eeLa~aI~~LL~d~~ 669 (781)
+||.. +.+.+++|||++|+|+|+....+. . .+.....|+.. . ++++++++|.++++|+.
T Consensus 89 ~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~ 156 (170)
T 2o6l_A 89 AFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDLLNALKRVINDPS 156 (170)
T ss_dssp EEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCHH
T ss_pred EEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHHHHHHHHHHcCHH
Confidence 99964 457999999999999999987532 1 22222333322 3 89999999999998874
No 49
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.75 E-value=4.5e-07 Score=99.96 Aligned_cols=126 Identities=9% Similarity=-0.040 Sum_probs=85.2
Q ss_pred CcEEEEEeecc---CccCHHHHHHHHHHhhccCCCcEEEEE-eCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHhcccE
Q 003992 532 SKGAYFLGKMV---WAKGYRELIDLLAKHKNDLDGFKLDVF-GNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKV 607 (781)
Q Consensus 532 ~~~ILfVGRL~---~~KGid~LLeA~~~L~~~~p~i~LvIV-G~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~ADV 607 (781)
..++++.|++. ..+.+..+++++..+ +.+++++ |.+... . ....-+|.+.++++. .++|..||+
T Consensus 238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~~--~----~~~~~~v~~~~~~~~-~~ll~~~d~ 305 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQ-----GRRVILSRGWTELV--L----PDDRDDCFAIDEVNF-QALFRRVAA 305 (416)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHT-----TCCEEEECTTTTCC--C----SCCCTTEEEESSCCH-HHHGGGSSE
T ss_pred CeEEEecCCCCccChHHHHHHHHHHHHHC-----CCeEEEEeCCcccc--c----cCCCCCEEEeccCCh-HHHhccCCE
Confidence 34556778875 467778888888765 3456554 765432 1 122224899999984 469999999
Q ss_pred EEEccCCCCChHHHHHHHHhCCcEEEeCCCCc----c-eeecCCcc--ccC--CCHHHHHHHHHHHHhCCCCCCCh
Q 003992 608 FINPSISDVLCTATAEALAMGKFVICADHPSN----E-FFRSFPNC--LTY--KTSEDFVARVKEALANDPQPLTP 674 (781)
Q Consensus 608 fVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~----g-~L~~~~ng--v~~--~D~eeLa~aI~~LL~d~~~r~~m 674 (781)
||. .+...+++|||++|+|+|+....+. . .+.....| +.. .+.++++++|.++ +|+..+.++
T Consensus 306 ~v~----~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~~ 376 (416)
T 1rrv_A 306 VIH----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTV-LAPETRARA 376 (416)
T ss_dssp EEE----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHH-TSHHHHHHH
T ss_pred EEe----cCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHHHHHHHHHh-hCHHHHHHH
Confidence 996 4456799999999999999866432 1 12112222 222 4789999999999 887655555
No 50
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=98.00 E-value=6e-05 Score=89.50 Aligned_cols=168 Identities=10% Similarity=-0.024 Sum_probs=112.3
Q ss_pred CCCCcEEEEEeeccCccCHHH-HHHHHHHhhc--cC-----CCcEEEEEeCCCCH--HH------HHHHHH------hcC
Q 003992 529 QAFSKGAYFLGKMVWAKGYRE-LIDLLAKHKN--DL-----DGFKLDVFGNGEDA--YE------VQSAAK------RLD 586 (781)
Q Consensus 529 ~~~~~~ILfVGRL~~~KGid~-LLeA~~~L~~--~~-----p~i~LvIVG~Gp~~--~~------L~~~a~------~lg 586 (781)
.++.+.+++|.|+...|+.++ ++..+.++.+ .. .++++++.|.|... .. +...++ +.+
T Consensus 513 dpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~ 592 (796)
T 2c4m_A 513 DPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVS 592 (796)
T ss_dssp CTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTT
T ss_pred CCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhHHHHHHHHHHHHHHHHHhccccccC
Confidence 456788899999999999999 8888877753 22 35899999988643 11 333343 233
Q ss_pred C--cEEEcCCCCC--HHHHHhcccEEEEccC--CCCChHHHHHHHHhCCcEEEeCCCCccee---ecCCccccC----CC
Q 003992 587 L--NLNFQKGRDH--ADDSLHGYKVFINPSI--SDVLCTATAEALAMGKFVICADHPSNEFF---RSFPNCLTY----KT 653 (781)
Q Consensus 587 L--~V~FlG~v~~--~e~ly~~ADVfVlPS~--~EgfGlviLEAMA~G~PVVaSd~gg~g~L---~~~~ngv~~----~D 653 (781)
- .|.|+..-+. ++.++.+||++.+||+ +|..|+.-+=||.-|.+.|++-.|.+-++ ++..|++.+ .+
T Consensus 593 ~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~e 672 (796)
T 2c4m_A 593 PLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVGEENAYIFGARVEE 672 (796)
T ss_dssp TTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHCGGGSEEESCCTTT
T ss_pred CceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhcCCCcEEEecCchhh
Confidence 2 4777654333 3389999999999999 99999999999999999998866644221 234555554 34
Q ss_pred HHHHHHH---HHHHHhCCCCCCCh---HHHHcCCHHHHHHHHHHHhhhccccc
Q 003992 654 SEDFVAR---VKEALANDPQPLTP---EQRYNLSWEAATQRFIEYSELNRILN 700 (781)
Q Consensus 654 ~eeLa~a---I~~LL~d~~~r~~m---~~~~~fSWe~iaerll~~Ye~~~vl~ 700 (781)
+.++..+ ....-.++. ..++ .....|||+.. ++|.++|+ .+++
T Consensus 673 v~~l~~~y~a~~~y~~~~~-~~~vvd~~~~g~fs~~~~-~~y~~Ly~--~L~~ 721 (796)
T 2c4m_A 673 LPALRESYKPYELYETVPG-LKRALDALDNGTLNDNNS-GLFYDLKH--SLIH 721 (796)
T ss_dssp HHHHHHTCCHHHHHHHSTT-HHHHHHTTTSSSSCCTTC-CHHHHHHH--HHHS
T ss_pred HHHHHHhhChHHHhhcCHH-HHHHHHHHHcCCCCCCCH-HHHHHHHH--HHHh
Confidence 5455432 222223332 1111 12356888776 77888888 6653
No 51
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.92 E-value=3.9e-05 Score=91.50 Aligned_cols=175 Identities=10% Similarity=-0.055 Sum_probs=129.1
Q ss_pred hhhHhhhCcCCCCcEEEEEeeccCccCHHHHHHHHHHhhccCCCcEEEEEeCCCC-HHHHHHHHHhcCCc---EEEcCCC
Q 003992 520 VATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGED-AYEVQSAAKRLDLN---LNFQKGR 595 (781)
Q Consensus 520 ~~~r~~~Gi~~~~~~ILfVGRL~~~KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~-~~~L~~~a~~lgL~---V~FlG~v 595 (781)
...|..+|++.+..++.++. ...|=-...++++.++.++.|+.+|++...... ...+++.+++.|+. |.|.+..
T Consensus 511 ~~~R~~~gLp~~~v~f~~fN--~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~ 588 (723)
T 4gyw_A 511 VTTRSQYGLPEDAIVYCNFN--QLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVA 588 (723)
T ss_dssp EEEGGGGTCCTTSEEEECCS--CGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred ccchhhcCCCCCCEEEEeCC--ccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCC
Confidence 34466788887654433333 346777889999999999999999988876543 47788888888987 9999998
Q ss_pred CCHH--HHHhcccEEEEccCCCCChHHHHHHHHhCCcEEEeCCCCc------ceeec-CCccccCCCHHHHHHHHHHHHh
Q 003992 596 DHAD--DSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSN------EFFRS-FPNCLTYKTSEDFVARVKEALA 666 (781)
Q Consensus 596 ~~~e--~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~------g~L~~-~~ngv~~~D~eeLa~aI~~LL~ 666 (781)
+..+ ..|+.+|||+=|--+ +-+++.+||+.||+|||+-..... .++.. +-.-+...|.++..+...++.+
T Consensus 589 ~~~~~l~~~~~~Di~LDt~p~-~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~~~~~Y~~~a~~la~ 667 (723)
T 4gyw_A 589 PKEEHVRRGQLADVCLDTPLC-NGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKNRQEYEDIAVKLGT 667 (723)
T ss_dssp CHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCSSHHHHHHHHHHHHH
T ss_pred CHHHHHHHhCCCeEEeCCCCc-CCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccCCHHHHHHHHHHHhc
Confidence 8766 788999999988766 458999999999999999643211 12111 1112455899999999999999
Q ss_pred CCCCCCCh--------HHHHcCCHHHHHHHHHHHhhhcccc
Q 003992 667 NDPQPLTP--------EQRYNLSWEAATQRFIEYSELNRIL 699 (781)
Q Consensus 667 d~~~r~~m--------~~~~~fSWe~iaerll~~Ye~~~vl 699 (781)
|++.+..+ ....-|+-...++.+.++|+ ++-
T Consensus 668 d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~--~~w 706 (723)
T 4gyw_A 668 DLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYL--QMW 706 (723)
T ss_dssp CHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHH--HHH
T ss_pred CHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHH--HHH
Confidence 98765544 11235888889999999998 553
No 52
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=97.88 E-value=0.00018 Score=76.28 Aligned_cols=245 Identities=11% Similarity=0.026 Sum_probs=134.9
Q ss_pred CEEEEEeCccCCCcCcccccHHHHHHHHHHcCCCEEEEEeccCCCCCCccccccccccCCchhhHHHHHHHHHhhCCccc
Q 003992 310 RNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKAD 389 (781)
Q Consensus 310 ~rIaI~TtaflP~~~G~av~~l~rA~~Lak~G~~~VtlVvP~l~~~dq~~v~p~i~f~~p~~qe~yir~~l~~rig~~~~ 389 (781)
|||+|.+++.. .+| .. -++|+.-||+.-. +|++++-.... + ++ +.+|++
T Consensus 1 mki~ir~Da~~-~IG-~G--HvmRcl~LA~~l~-~v~F~~~~~~~--------~---------------~~-~~~g~~-- 49 (282)
T 3hbm_A 1 MKVLFRSDSSS-QIG-FG--HIKRDLVLAKQYS-DVSFACLPLEG--------S---------------LI-DEIPYP-- 49 (282)
T ss_dssp CCEEEEECCBT-TTB-SH--HHHHHHHHHTTCS-SEEEEECCCTT--------C---------------CG-GGCCSC--
T ss_pred CEEEEEEecCC-Ccc-cc--HHHHHHHHHHHHH-hCEEEEecCcH--------h---------------HH-HHCCCe--
Confidence 79999999884 343 22 2457888888764 88887632110 0 01 112332
Q ss_pred ceeeccCCcccccccccCchHhHHhhcccCCCcEEEECCCchhHHHHHHHHHHhhcCCEEEEEECCcHHHHHHhhcchhH
Q 003992 390 FKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQ 469 (781)
Q Consensus 390 ~~i~~yP~~~~~~~~sil~v~~L~k~I~~~kPDVIhl~~P~~l~~~~~g~~~akk~~pvV~ivHt~y~~y~~~~~~~~~~ 469 (781)
+...+.. ....+.+.+++.+||++++.+...-..+. ..+....+..+..+.+.. .
T Consensus 50 --v~~l~~~---------d~~~~~~~l~~~~~d~lIvD~Y~~~~~~~--~~lk~~~~~~i~~iDD~~-~----------- 104 (282)
T 3hbm_A 50 --VYELSSE---------SIYELINLIKEEKFELLIIDHYGISVDDE--KLIKLETGVKILSFDDEI-K----------- 104 (282)
T ss_dssp --EEECSSS---------CHHHHHHHHHHHTCSEEEEECTTCCHHHH--HHHHHHHCCEEEEECSSC-C-----------
T ss_pred --EEEcCcc---------CHHHHHHHHHhCCCCEEEEECCCCCHHHH--HHHHHhcCcEEEEEecCC-C-----------
Confidence 2222211 12345667777899999998765433332 222222343333443221 0
Q ss_pred HHHHHHHHHHHHHhcCCEEEEcChhhh--hcCC---CcEEeeCCCCCCCCCCCcchhhHhhhCcCCCCcEEEEEeeccCc
Q 003992 470 AFFVKHINNWVTRAYCDKVLRLSAATQ--DLPK---SVICNVHGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWA 544 (781)
Q Consensus 470 ~~l~k~l~r~l~r~~aD~VI~vS~~~k--~l~~---kivvi~nGVD~~~f~p~~~~~~r~~~Gi~~~~~~ILfVGRL~~~ 544 (781)
..+||.+|-.+.... .+.. ......-|.+...+.+.-.. .. +......+.+++++|..+..
T Consensus 105 ------------~~~~Dllin~~~~~~~~~Y~~~~p~~~~~l~G~~Y~~lR~eF~~-~~-~~~r~~~~~ILv~~GG~d~~ 170 (282)
T 3hbm_A 105 ------------PHHCDILLNVNAYAKASDYEGLVPFKCEVRCGFSYALIREEFYQ-EA-KENRKKKYDFFICMGGTDIK 170 (282)
T ss_dssp ------------CCCCSEEEECSTTCCGGGGTTTCC-CCEEEESGGGCCCCHHHHH-HT-TCCCCCCEEEEEECCSCCTT
T ss_pred ------------cccCCEEEeCCcccchhhccccCCCCCeEeeCCcccccCHHHHH-hh-hhccccCCeEEEEECCCchh
Confidence 125999998775332 2221 11122335432222111000 00 00001122355678876654
Q ss_pred cCHHHHHHHHHHhhccCCCcEEEEEeCCCC-HHHHHHHHHhcCCcEEEcCCCCCHHHHHhcccEEEEccCCCCChHHHHH
Q 003992 545 KGYRELIDLLAKHKNDLDGFKLDVFGNGED-AYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAE 623 (781)
Q Consensus 545 KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~-~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~ADVfVlPS~~EgfGlviLE 623 (781)
.-...+++++.. . .. -.+|.|.|.. .+++++.+++.. ++.+.+++++..++|+.||+.|.+. |+++.|
T Consensus 171 ~l~~~vl~~L~~---~-~~-i~vv~G~~~~~~~~l~~~~~~~~-~v~v~~~~~~m~~~m~~aDlvI~~g-----G~T~~E 239 (282)
T 3hbm_A 171 NLSLQIASELPK---T-KI-ISIATSSSNPNLKKLQKFAKLHN-NIRLFIDHENIAKLMNESNKLIISA-----SSLVNE 239 (282)
T ss_dssp CHHHHHHHHSCT---T-SC-EEEEECTTCTTHHHHHHHHHTCS-SEEEEESCSCHHHHHHTEEEEEEES-----SHHHHH
T ss_pred hHHHHHHHHhhc---C-CC-EEEEECCCchHHHHHHHHHhhCC-CEEEEeCHHHHHHHHHHCCEEEECC-----cHHHHH
Confidence 433444554432 2 23 4466787654 577777766443 5899999999999999999999842 689999
Q ss_pred HHHhCCcEEEeC
Q 003992 624 ALAMGKFVICAD 635 (781)
Q Consensus 624 AMA~G~PVVaSd 635 (781)
++++|+|.|...
T Consensus 240 ~~~~g~P~i~ip 251 (282)
T 3hbm_A 240 ALLLKANFKAIC 251 (282)
T ss_dssp HHHTTCCEEEEC
T ss_pred HHHcCCCEEEEe
Confidence 999999999864
No 53
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=97.71 E-value=5.7e-05 Score=89.70 Aligned_cols=171 Identities=13% Similarity=-0.003 Sum_probs=114.3
Q ss_pred hhCc--CCCCcEEEEEeeccCccCHHH-HHHHHHHhhc--cC-----CCcEEEEEeCCCCH--HH------HHHHHH---
Q 003992 525 EQGQ--QAFSKGAYFLGKMVWAKGYRE-LIDLLAKHKN--DL-----DGFKLDVFGNGEDA--YE------VQSAAK--- 583 (781)
Q Consensus 525 ~~Gi--~~~~~~ILfVGRL~~~KGid~-LLeA~~~L~~--~~-----p~i~LvIVG~Gp~~--~~------L~~~a~--- 583 (781)
+.|+ .++.+.+++|.|+...|+.++ ++..+.++.+ .. .++++++.|.|... .. +...++
T Consensus 517 ~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in 596 (796)
T 1l5w_A 517 RTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVIN 596 (796)
T ss_dssp HHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhHHHHHHHHHHHHHHHHHhc
Confidence 3565 456788899999999999999 8888877654 12 35899999988643 11 333333
Q ss_pred ---hcC--CcEEEcCCCCC--HHHHHhcccEEEEccC--CCCChHHHHHHHHhCCcEEEeCCCCccee---ecCCccccC
Q 003992 584 ---RLD--LNLNFQKGRDH--ADDSLHGYKVFINPSI--SDVLCTATAEALAMGKFVICADHPSNEFF---RSFPNCLTY 651 (781)
Q Consensus 584 ---~lg--L~V~FlG~v~~--~e~ly~~ADVfVlPS~--~EgfGlviLEAMA~G~PVVaSd~gg~g~L---~~~~ngv~~ 651 (781)
+.+ +.|.|+..-+. ++.++.+||++.+||+ +|..|+.-+=||.-|.+.|++-.|.+-++ ++..|++.+
T Consensus 597 ~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~F 676 (796)
T 1l5w_A 597 NDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIF 676 (796)
T ss_dssp TCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEEC
T ss_pred cccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeeehhhccCCCcEEEe
Confidence 222 24888754443 3389999999999999 99999999999999999998877765332 234677766
Q ss_pred -CCHHHHHHHH-------HHHHhCCCCCCCh---HHHHcCCHHHHHHHHHHHhhhcccc
Q 003992 652 -KTSEDFVARV-------KEALANDPQPLTP---EQRYNLSWEAATQRFIEYSELNRIL 699 (781)
Q Consensus 652 -~D~eeLa~aI-------~~LL~d~~~r~~m---~~~~~fSWe~iaerll~~Ye~~~vl 699 (781)
.+++++.+.- ...-.++ ...++ .....|||+.. ++|.++|+ .++
T Consensus 677 G~~~~ev~~l~~~~y~a~~~y~~~~-~~~~vvd~~~~g~fs~~~~-~~y~~Ly~--~L~ 731 (796)
T 1l5w_A 677 GHTVEQVKAILAKGYDPVKWRKKDK-VLDAVLKELESGKYSDGDK-HAFDQMLH--SIG 731 (796)
T ss_dssp SCCHHHHHHHHHHCCCHHHHHHHCH-HHHHHHHHHHHTTTTTTCT-TTTHHHHH--HTS
T ss_pred cCCHHHHHHHHHcccCHHHHhhcCH-HHHHHHHHHHcCCCCCCcH-HHHHHHHH--HHh
Confidence 5556655321 1111233 11111 23456888765 67888887 554
No 54
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=97.69 E-value=6e-05 Score=89.85 Aligned_cols=167 Identities=11% Similarity=0.033 Sum_probs=109.6
Q ss_pred CCCCcEEEEEeeccCccCHHHH-HHHHHHhhc--cCC-----CcEEEEEeCCCCH--HH------HHHHHHhc-------
Q 003992 529 QAFSKGAYFLGKMVWAKGYREL-IDLLAKHKN--DLD-----GFKLDVFGNGEDA--YE------VQSAAKRL------- 585 (781)
Q Consensus 529 ~~~~~~ILfVGRL~~~KGid~L-LeA~~~L~~--~~p-----~i~LvIVG~Gp~~--~~------L~~~a~~l------- 585 (781)
.++.+.+++|.|+...|+.+++ +..+.++.+ ..| ++++++.|.|... .. +...++..
T Consensus 547 dpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~ 626 (824)
T 2gj4_A 547 NPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVG 626 (824)
T ss_dssp CTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTG
T ss_pred CCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccC
Confidence 4567888999999999999997 888777741 223 5799999988643 11 33344322
Q ss_pred -CCcEEEcCCCCC--HHHHHhcccEEEEccC--CCCChHHHHHHHHhCCcEEEeCCCCcceee---cCCccccC-CCHHH
Q 003992 586 -DLNLNFQKGRDH--ADDSLHGYKVFINPSI--SDVLCTATAEALAMGKFVICADHPSNEFFR---SFPNCLTY-KTSED 656 (781)
Q Consensus 586 -gL~V~FlG~v~~--~e~ly~~ADVfVlPS~--~EgfGlviLEAMA~G~PVVaSd~gg~g~L~---~~~ngv~~-~D~ee 656 (781)
.+.|.|+..-+. ++.++.+||++.+||+ +|..|+.-+=||.-|.+.|++--|.+-++. +..|++.+ ...++
T Consensus 627 ~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG~~~~e 706 (824)
T 2gj4_A 627 DRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVED 706 (824)
T ss_dssp GGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHH
T ss_pred CceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchhhhccCCCCEEEeCCcHHH
Confidence 124777654333 3389999999999999 999999999999999999999777663322 45666666 34555
Q ss_pred HHHHHHH-------HHhCCCCCCCh---HHHHcCCHHHHHHHHHHHhhhcccc
Q 003992 657 FVARVKE-------ALANDPQPLTP---EQRYNLSWEAATQRFIEYSELNRIL 699 (781)
Q Consensus 657 La~aI~~-------LL~d~~~r~~m---~~~~~fSWe~iaerll~~Ye~~~vl 699 (781)
+ .++.. +..+.+..+++ .....|+|... ++|.++|+ .++
T Consensus 707 v-~~l~~~~~~a~~~Y~~~~~l~~v~d~i~~g~fs~~~~-~~y~~ly~--~l~ 755 (824)
T 2gj4_A 707 V-DRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQP-DLFKDIVN--MLM 755 (824)
T ss_dssp H-HHHHHHCCCHHHHHHHCHHHHHHHHHHHHTTTCTTST-TTTHHHHH--HHH
T ss_pred H-HHHHHcCCCHHHHhcCCHHHHHHHHHHHhCCCCCCCh-HHHHHHHH--HHH
Confidence 5 33321 11111111111 22345787765 66777776 554
No 55
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=96.72 E-value=0.81 Score=51.46 Aligned_cols=75 Identities=15% Similarity=0.117 Sum_probs=51.6
Q ss_pred EEEcCCCCCHHHHHhccc--EEEEccCCCCChHHHHHHHHhCCcEEEeCCCCc----c-eee-cCCcccc-------CCC
Q 003992 589 LNFQKGRDHADDSLHGYK--VFINPSISDVLCTATAEALAMGKFVICADHPSN----E-FFR-SFPNCLT-------YKT 653 (781)
Q Consensus 589 V~FlG~v~~~e~ly~~AD--VfVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~----g-~L~-~~~ngv~-------~~D 653 (781)
+...++.+.. ++|..++ +|| +=+--.+++||+++|+|+|+-...+. . .++ ..+.|+. .-+
T Consensus 341 ~~v~~w~Pq~-~vL~h~~v~~fv----tHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~ 415 (480)
T 2vch_A 341 FVIPFWAPQA-QVLAHPSTGGFL----THCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVR 415 (480)
T ss_dssp EEEESCCCHH-HHHHSTTEEEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCC
T ss_pred EEEeCccCHH-HHhCCCCcCeEE----ecccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccC
Confidence 4555788876 5999888 566 33556899999999999999876532 1 111 1122221 237
Q ss_pred HHHHHHHHHHHHhCC
Q 003992 654 SEDFVARVKEALAND 668 (781)
Q Consensus 654 ~eeLa~aI~~LL~d~ 668 (781)
.+++.++|.++++++
T Consensus 416 ~~~l~~av~~vl~~~ 430 (480)
T 2vch_A 416 REEVARVVKGLMEGE 430 (480)
T ss_dssp HHHHHHHHHHHHTST
T ss_pred HHHHHHHHHHHhcCc
Confidence 899999999999853
No 56
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=95.91 E-value=0.02 Score=60.88 Aligned_cols=108 Identities=13% Similarity=0.117 Sum_probs=71.8
Q ss_pred hHhhhCcCCCC-cEEEEEee-ccCccCHH--HHHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcC----Cc-EEEc
Q 003992 522 TDREQGQQAFS-KGAYFLGK-MVWAKGYR--ELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLD----LN-LNFQ 592 (781)
Q Consensus 522 ~r~~~Gi~~~~-~~ILfVGR-L~~~KGid--~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lg----L~-V~Fl 592 (781)
.+..+++.... .+++..|. ..+.|.+. .+.+++..|.++ +++++++|+..+.+..++..+..+ .. +.+.
T Consensus 170 ~~~~~~~~~~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~--~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~l~ 247 (348)
T 1psw_A 170 TCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLA 247 (348)
T ss_dssp HHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECT
T ss_pred HHHHhCCCCCCcEEEEECCCCccccCCCCHHHHHHHHHHHHHC--CCeEEEEeChhhHHHHHHHHHhhhhccccceEecc
Confidence 34455654334 44567776 44556654 788888877664 789999987666555555554332 23 5667
Q ss_pred CCCCCHH--HHHhcccEEEEccCCCCChHHHHHHHHhCCcEEEeCC
Q 003992 593 KGRDHAD--DSLHGYKVFINPSISDVLCTATAEALAMGKFVICADH 636 (781)
Q Consensus 593 G~v~~~e--~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~ 636 (781)
|..+-.+ ++++.||++|.... |..-+ |.|+|+|+|+--.
T Consensus 248 g~~sl~e~~ali~~a~l~I~~Ds----g~~Hl-Aaa~g~P~v~lfg 288 (348)
T 1psw_A 248 GETQLDQAVILIAACKAIVTNDS----GLMHV-AAALNRPLVALYG 288 (348)
T ss_dssp TTSCHHHHHHHHHTSSEEEEESS----HHHHH-HHHTTCCEEEEES
T ss_pred CcCCHHHHHHHHHhCCEEEecCC----HHHHH-HHHcCCCEEEEEC
Confidence 7766555 89999999998752 44444 9999999998633
No 57
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=95.42 E-value=0.026 Score=57.71 Aligned_cols=48 Identities=10% Similarity=0.026 Sum_probs=40.0
Q ss_pred CCcEEEcCCCCCHHHHHh-cccEEEEccCCCCChHHHHHHHHhCCcEEEeCCC
Q 003992 586 DLNLNFQKGRDHADDSLH-GYKVFINPSISDVLCTATAEALAMGKFVICADHP 637 (781)
Q Consensus 586 gL~V~FlG~v~~~e~ly~-~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~g 637 (781)
++.+...++.++...+|. .||++|. =+-..+++|++++|+|.|.-..+
T Consensus 113 ~~~v~v~~f~~~m~~~l~~~AdlvIs----haGagTv~Eal~~G~P~IvVP~~ 161 (224)
T 2jzc_A 113 KLKVIGFDFSTKMQSIIRDYSDLVIS----HAGTGSILDSLRLNKPLIVCVND 161 (224)
T ss_dssp SSEEEECCSSSSHHHHHHHHCSCEEE----SSCHHHHHHHHHTTCCCCEECCS
T ss_pred CceEEEeeccchHHHHHHhcCCEEEE----CCcHHHHHHHHHhCCCEEEEcCc
Confidence 445777899999988999 9999993 45678999999999999986543
No 58
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=95.03 E-value=0.055 Score=60.67 Aligned_cols=76 Identities=13% Similarity=0.120 Sum_probs=55.1
Q ss_pred cEEEcCCCCCHHHHHh--cccEEEEccCCCCChHHHHHHHHhCCcEEEeCCCCc-----ceeecC-CccccC----CCHH
Q 003992 588 NLNFQKGRDHADDSLH--GYKVFINPSISDVLCTATAEALAMGKFVICADHPSN-----EFFRSF-PNCLTY----KTSE 655 (781)
Q Consensus 588 ~V~FlG~v~~~e~ly~--~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~-----g~L~~~-~ngv~~----~D~e 655 (781)
++...++.++.+ +|. ++|+|| +=+..++++||+++|+|+|+-...+. ..+... +.|+.. -+.+
T Consensus 326 ~~~v~~w~pq~~-vL~h~~~~~fv----th~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~~~~ 400 (456)
T 2c1x_A 326 YGMVVPWAPQAE-VLAHEAVGAFV----THCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKS 400 (456)
T ss_dssp TEEEESCCCHHH-HHTSTTEEEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCCHH
T ss_pred ceEEecCCCHHH-HhcCCcCCEEE----ecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCCcCHH
Confidence 377779988765 888 778999 45567899999999999999876432 112222 222222 3789
Q ss_pred HHHHHHHHHHhCC
Q 003992 656 DFVARVKEALAND 668 (781)
Q Consensus 656 eLa~aI~~LL~d~ 668 (781)
++.++|.++++|+
T Consensus 401 ~l~~~i~~ll~~~ 413 (456)
T 2c1x_A 401 GLMSCFDQILSQE 413 (456)
T ss_dssp HHHHHHHHHHHSH
T ss_pred HHHHHHHHHHCCC
Confidence 9999999999886
No 59
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=94.68 E-value=0.21 Score=52.71 Aligned_cols=128 Identities=13% Similarity=0.127 Sum_probs=81.6
Q ss_pred CcEEEEEeeccCccCHH--HHHHHHHHhhccCCCcEEEEEeCCCCHHH-HHHHHHhcCCcEEEcCCCCCHH--HHHhccc
Q 003992 532 SKGAYFLGKMVWAKGYR--ELIDLLAKHKNDLDGFKLDVFGNGEDAYE-VQSAAKRLDLNLNFQKGRDHAD--DSLHGYK 606 (781)
Q Consensus 532 ~~~ILfVGRL~~~KGid--~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~-L~~~a~~lgL~V~FlG~v~~~e--~ly~~AD 606 (781)
+.+++..|.-...|.+. .+.+++..+.+. ++++++.++++...+ .++..+... .+.+.|..+-.+ ++++.||
T Consensus 179 ~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~--~~~vvl~~g~~~e~~~~~~i~~~~~-~~~l~g~~sl~el~ali~~a~ 255 (326)
T 2gt1_A 179 EYAVFLHATTRDDKHWPEEHWRELIGLLADS--GIRIKLPWGAPHEEERAKRLAEGFA-YVEVLPKMSLEGVARVLAGAK 255 (326)
T ss_dssp SEEEEECCCSSGGGSCCHHHHHHHHHHTTTT--CCEEEECCSSHHHHHHHHHHHTTCT-TEEECCCCCHHHHHHHHHTCS
T ss_pred CEEEEEeCCCCccccCCHHHHHHHHHHHHHC--CCcEEEecCCHHHHHHHHHHHhhCC-cccccCCCCHHHHHHHHHhCC
Confidence 34556666544555554 777777777653 688888744554433 344433322 367778766555 8999999
Q ss_pred EEEEccCCCCChHHHHHHHHhCCcEEEeCCCCc----------ce-eecCCccccCCCHHHHHHHHHHHHhC
Q 003992 607 VFINPSISDVLCTATAEALAMGKFVICADHPSN----------EF-FRSFPNCLTYKTSEDFVARVKEALAN 667 (781)
Q Consensus 607 VfVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~----------g~-L~~~~ngv~~~D~eeLa~aI~~LL~d 667 (781)
++|-.-. |..-+ |.|+|+|+|+--.+.+ .. +.+...|+..=++++..+++.++++.
T Consensus 256 l~I~~DS----G~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 256 FVVSVDT----GLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCRAPGNELSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp EEEEESS----HHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEECGGGCGGGCCHHHHHHHHHHTTTT
T ss_pred EEEecCC----cHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEecCCcccccCCCHHHHHHHHHHHHHH
Confidence 9997732 66666 7789999998733322 11 11233455556888999999888864
No 60
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=94.53 E-value=0.13 Score=55.57 Aligned_cols=108 Identities=15% Similarity=0.191 Sum_probs=74.3
Q ss_pred hhCcCCCCcEE-EEEeeccCccCH--HHHHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCc-EEEcCCCCCHH-
Q 003992 525 EQGQQAFSKGA-YFLGKMVWAKGY--RELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLN-LNFQKGRDHAD- 599 (781)
Q Consensus 525 ~~Gi~~~~~~I-LfVGRL~~~KGi--d~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~-V~FlG~v~~~e- 599 (781)
..|+.++.++| +..|.-...|.+ +.+.+++..+.++ +.+++++|+..+.+..++.....+.. +.+.|..+-.+
T Consensus 178 ~~g~~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~--g~~vvl~g~~~e~~~~~~i~~~~~~~~~~l~g~~sl~e~ 255 (349)
T 3tov_A 178 SHGLTDTDILIGFNIGSAVPEKRWPAERFAHVADYFGRL--GYKTVFFGGPMDLEMVQPVVEQMETKPIVATGKFQLGPL 255 (349)
T ss_dssp HTTCCTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH--TCEEEECCCTTTHHHHHHHHHTCSSCCEECTTCCCHHHH
T ss_pred HcCCCCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC--CCeEEEEeCcchHHHHHHHHHhcccccEEeeCCCCHHHH
Confidence 34555444544 566654455554 5677777777665 67888888776777666766655544 67778776555
Q ss_pred -HHHhcccEEEEccCCCCChHHHHHHHHhCCcEEEeCCCCc
Q 003992 600 -DSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSN 639 (781)
Q Consensus 600 -~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~ 639 (781)
++++.||++|-+-. |..-+ |.|+|+|+|+--.+.+
T Consensus 256 ~ali~~a~~~i~~Ds----G~~Hl-Aaa~g~P~v~lfg~t~ 291 (349)
T 3tov_A 256 AAAMNRCNLLITNDS----GPMHV-GISQGVPIVALYGPSN 291 (349)
T ss_dssp HHHHHTCSEEEEESS----HHHHH-HHTTTCCEEEECSSCC
T ss_pred HHHHHhCCEEEECCC----CHHHH-HHhcCCCEEEEECCCC
Confidence 89999999997632 55656 9999999999754443
No 61
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=94.33 E-value=0.28 Score=55.16 Aligned_cols=77 Identities=14% Similarity=0.202 Sum_probs=55.3
Q ss_pred cEEEcCCCCCHHHHHhcccE--EEEccCCCCChHHHHHHHHhCCcEEEeCCCCc----c-eee-cCCccccC---CCHHH
Q 003992 588 NLNFQKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVICADHPSN----E-FFR-SFPNCLTY---KTSED 656 (781)
Q Consensus 588 ~V~FlG~v~~~e~ly~~ADV--fVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~----g-~L~-~~~ngv~~---~D~ee 656 (781)
++...++.++.+ +|+.+++ || +=+...+++||+++|+|+|+-...+. . .+. ..+.|+.. -+.++
T Consensus 354 ~~~v~~~~pq~~-~L~h~~~~~~v----th~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~ 428 (482)
T 2pq6_A 354 RGLIASWCPQDK-VLNHPSIGGFL----THCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKREE 428 (482)
T ss_dssp TEEEESCCCHHH-HHTSTTEEEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCCHHH
T ss_pred CEEEEeecCHHH-HhcCCCCCEEE----ecCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECCCCCHHH
Confidence 478889998775 8876554 77 34567899999999999999876533 1 122 22223322 37899
Q ss_pred HHHHHHHHHhCCC
Q 003992 657 FVARVKEALANDP 669 (781)
Q Consensus 657 La~aI~~LL~d~~ 669 (781)
+.++|.++++|+.
T Consensus 429 l~~~i~~ll~~~~ 441 (482)
T 2pq6_A 429 LAKLINEVIAGDK 441 (482)
T ss_dssp HHHHHHHHHTSHH
T ss_pred HHHHHHHHHcCCc
Confidence 9999999998863
No 62
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=92.97 E-value=0.58 Score=52.57 Aligned_cols=76 Identities=12% Similarity=0.087 Sum_probs=53.0
Q ss_pred cEEEcCCCCCHHHHHhccc--EEEEccCCCCChHHHHHHHHhCCcEEEeCCCCc----c-eeecC-Ccccc----CCCHH
Q 003992 588 NLNFQKGRDHADDSLHGYK--VFINPSISDVLCTATAEALAMGKFVICADHPSN----E-FFRSF-PNCLT----YKTSE 655 (781)
Q Consensus 588 ~V~FlG~v~~~e~ly~~AD--VfVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~----g-~L~~~-~ngv~----~~D~e 655 (781)
++...++.++. .++..++ +|| + =+.-.+++||+++|+|+|+-...+. . .+... +.|+. .-+.+
T Consensus 328 ~~~vv~w~Pq~-~vL~h~~v~~fv--t--H~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~ 402 (454)
T 3hbf_A 328 KGKIVAWAPQV-EILKHSSVGVFL--T--HSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKE 402 (454)
T ss_dssp TEEEESSCCHH-HHHHSTTEEEEE--E--CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCHH
T ss_pred ceEEEeeCCHH-HHHhhcCcCeEE--e--cCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCHH
Confidence 36777999875 5999999 666 2 3456899999999999999865432 1 11111 22222 14789
Q ss_pred HHHHHHHHHHhCC
Q 003992 656 DFVARVKEALAND 668 (781)
Q Consensus 656 eLa~aI~~LL~d~ 668 (781)
++.++|.++++++
T Consensus 403 ~l~~av~~ll~~~ 415 (454)
T 3hbf_A 403 SIKKALELTMSSE 415 (454)
T ss_dssp HHHHHHHHHHSSH
T ss_pred HHHHHHHHHHCCC
Confidence 9999999999763
No 63
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=92.32 E-value=0.47 Score=53.12 Aligned_cols=73 Identities=11% Similarity=0.040 Sum_probs=51.9
Q ss_pred EEEcCCCCCHHHHHh--cccEEEEccCCCCChHHHHHHHHhCCcEEEeCCCCc----c-eee-cCCcccc----------
Q 003992 589 LNFQKGRDHADDSLH--GYKVFINPSISDVLCTATAEALAMGKFVICADHPSN----E-FFR-SFPNCLT---------- 650 (781)
Q Consensus 589 V~FlG~v~~~e~ly~--~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~----g-~L~-~~~ngv~---------- 650 (781)
+...++.++.+ +|. ++|+|| +=+-.++++||+++|+|+|+-...+. . .++ ..+.|+.
T Consensus 334 ~~v~~w~pq~~-vL~h~~~~~fv----th~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~ 408 (463)
T 2acv_A 334 GMICGWAPQVE-VLAHKAIGGFV----SHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSD 408 (463)
T ss_dssp EEEESSCCHHH-HHHSTTEEEEE----ECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCC
T ss_pred EEEEccCCHHH-HhCCCccCeEE----ecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccCCCCc
Confidence 67778888765 775 688898 44567899999999999999866432 1 111 2222221
Q ss_pred CCCHHHHHHHHHHHHh
Q 003992 651 YKTSEDFVARVKEALA 666 (781)
Q Consensus 651 ~~D~eeLa~aI~~LL~ 666 (781)
.-+.+++.++|.++++
T Consensus 409 ~~~~~~l~~ai~~ll~ 424 (463)
T 2acv_A 409 VVAAEEIEKGLKDLMD 424 (463)
T ss_dssp CCCHHHHHHHHHHHTC
T ss_pred cccHHHHHHHHHHHHh
Confidence 1378999999999995
No 64
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=68.13 E-value=18 Score=43.56 Aligned_cols=122 Identities=11% Similarity=0.008 Sum_probs=82.7
Q ss_pred CCCcEEEEEeeccCccCHHH-HHHHHHHh---hcc-------------CCCcEEEEEeCCC---CH-HHHHHHHHh----
Q 003992 530 AFSKGAYFLGKMVWAKGYRE-LIDLLAKH---KND-------------LDGFKLDVFGNGE---DA-YEVQSAAKR---- 584 (781)
Q Consensus 530 ~~~~~ILfVGRL~~~KGid~-LLeA~~~L---~~~-------------~p~i~LvIVG~Gp---~~-~~L~~~a~~---- 584 (781)
++...++++-|+...|...+ ++..+.++ +.. .....+++.|.-. .. ..+.+++..
T Consensus 598 p~sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~~~~~~~~p~~~~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~ 677 (879)
T 1ygp_A 598 DDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKNMLKNGASIEEVARKYPRKVSIFGGKSAPGYYMAKLIIKLINCVADI 677 (879)
T ss_dssp GGCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHH
T ss_pred CCeeeeeeeehhhHhHHHHHHHHHHHHHHHHHHhCccccCCCcccccCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHH
Confidence 45667789999999999988 56655433 333 2347777777532 11 222222221
Q ss_pred ------cC--CcEEEcCCCC--CHHHHHhcccEEEEccC--CCCChHHHHHHHHhCCcEEEeCCCCcceee---cCCccc
Q 003992 585 ------LD--LNLNFQKGRD--HADDSLHGYKVFINPSI--SDVLCTATAEALAMGKFVICADHPSNEFFR---SFPNCL 649 (781)
Q Consensus 585 ------lg--L~V~FlG~v~--~~e~ly~~ADVfVlPS~--~EgfGlviLEAMA~G~PVVaSd~gg~g~L~---~~~ngv 649 (781)
.+ +.|.|+..-+ .++.++.+|||....|+ .|.-|+.-+=+|.-|.+.|+|--|.+-++. +..|++
T Consensus 678 iN~Dp~v~~~LKVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMKfalNGaLtlgtlDGanvEi~e~vG~eN~f 757 (879)
T 1ygp_A 678 VNNDESIEHLLKVVFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTVDGANVEITREIGEDNVF 757 (879)
T ss_dssp HTTCGGGTTSEEEEEETTCCHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTTTCEEEEESCTHHHHHHHHHCGGGSE
T ss_pred hccChhhCCceEEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCchhhHHHHcCCeeeecccchhHHHHHHcCcccEE
Confidence 11 2488887644 34489999999999997 599999999999999999999878663322 345655
Q ss_pred cC
Q 003992 650 TY 651 (781)
Q Consensus 650 ~~ 651 (781)
.+
T Consensus 758 iF 759 (879)
T 1ygp_A 758 LF 759 (879)
T ss_dssp EE
T ss_pred Ec
Confidence 55
No 65
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=52.69 E-value=33 Score=35.98 Aligned_cols=51 Identities=12% Similarity=0.159 Sum_probs=32.4
Q ss_pred CCEEEEEeCccCCCcCcccccHHHH-HHHHHHcCCCEEEEEeccCCCCCCcccc
Q 003992 309 KRNVAIVTTASLPWMTGTAVNPLFR-AAYLAKTEQQNVTLLVPWLCKSDQELVY 361 (781)
Q Consensus 309 ~~rIaI~TtaflP~~~G~av~~l~r-A~~Lak~G~~~VtlVvP~l~~~dq~~v~ 361 (781)
+..|-|+.+.+.|- +-. ...+.. +..+.+.+..+||+|+|++..+.|.+.+
T Consensus 45 g~dV~iiqs~~~p~-nd~-lmeLl~~ida~k~~~A~~it~ViPY~~YaRQDr~~ 96 (286)
T 3lrt_A 45 LTGHNIFIIGNTHS-DAE-VMEMILTLSAIQDYRTKSVNIIAPYYGYARQHQRY 96 (286)
T ss_dssp CTTSEEEEECCCCS-HHH-HHHHHHHHHHGGGSCCSEEEEEESSCTTTTCCSCS
T ss_pred CCcEEEEEeCCCCC-cHH-HHHHHHHHHHHHHcCCCEEEEEecCcccccCcccC
Confidence 67888887776552 111 122223 3344455667999999999987776643
No 66
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=50.37 E-value=36 Score=35.95 Aligned_cols=96 Identities=15% Similarity=0.113 Sum_probs=61.7
Q ss_pred EEEEEeeccCccCHHHHHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHhc--ccEEEEc
Q 003992 534 GAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHG--YKVFINP 611 (781)
Q Consensus 534 ~ILfVGRL~~~KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~--ADVfVlP 611 (781)
.|..||--...+.+-..+.++..+....++++++-+-+ ++.+..++.++++++.-.| .+.++++.. .|+++..
T Consensus 27 rvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d-~~~~~a~~~a~~~g~~~~y----~d~~ell~~~~iDaV~Ia 101 (393)
T 4fb5_A 27 GIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAE-ANAGLAEARAGEFGFEKAT----ADWRALIADPEVDVVSVT 101 (393)
T ss_dssp EEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEEC-C--TTHHHHHHHHTCSEEE----SCHHHHHHCTTCCEEEEC
T ss_pred cEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEEC-CCHHHHHHHHHHhCCCeec----CCHHHHhcCCCCcEEEEC
Confidence 46666643222333333344444444557788877665 3445567777877765333 456677764 6888888
Q ss_pred cCCCCChHHHHHHHHhCCcEEEe
Q 003992 612 SISDVLCTATAEALAMGKFVICA 634 (781)
Q Consensus 612 S~~EgfGlviLEAMA~G~PVVaS 634 (781)
+....-.-.+++|+.+|++|+|=
T Consensus 102 tP~~~H~~~a~~al~aGkhVl~E 124 (393)
T 4fb5_A 102 TPNQFHAEMAIAALEAGKHVWCE 124 (393)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEEC
T ss_pred CChHHHHHHHHHHHhcCCeEEEc
Confidence 87777777899999999999984
No 67
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=48.61 E-value=43 Score=34.60 Aligned_cols=68 Identities=9% Similarity=0.018 Sum_probs=50.5
Q ss_pred CCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHhcccEEEEccCCCCChHHHHHHHHhCCcEEEe
Q 003992 561 LDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVICA 634 (781)
Q Consensus 561 ~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaS 634 (781)
.++++++-+-+ ...+..++.+++.+... .++.++++...|+++..+......-.+.+|+..|++|++-
T Consensus 29 ~~~~~l~av~d-~~~~~~~~~a~~~~~~~-----~~~~~~ll~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~E 96 (308)
T 3uuw_A 29 SERFEFVGAFT-PNKVKREKICSDYRIMP-----FDSIESLAKKCDCIFLHSSTETHYEIIKILLNLGVHVYVD 96 (308)
T ss_dssp CSSSEEEEEEC-SCHHHHHHHHHHHTCCB-----CSCHHHHHTTCSEEEECCCGGGHHHHHHHHHHTTCEEEEC
T ss_pred CCCeEEEEEEC-CCHHHHHHHHHHcCCCC-----cCCHHHHHhcCCEEEEeCCcHhHHHHHHHHHHCCCcEEEc
Confidence 47788875543 45666777777777432 3556678889999998887777677788999999999975
No 68
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=47.02 E-value=51 Score=34.70 Aligned_cols=96 Identities=19% Similarity=0.144 Sum_probs=60.6
Q ss_pred EEEEEeeccCccCHHHHHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHhc--ccEEEEc
Q 003992 534 GAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHG--YKVFINP 611 (781)
Q Consensus 534 ~ILfVGRL~~~KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~--ADVfVlP 611 (781)
.|..||--...+.+-..+..+..+.....+.+++-+.+ .+.+..++.++++++.-.| .+.++++.. .|+++..
T Consensus 8 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d-~~~~~a~~~a~~~g~~~~~----~d~~~ll~~~~iDaV~I~ 82 (390)
T 4h3v_A 8 GIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCG-RDAEAVRAAAGKLGWSTTE----TDWRTLLERDDVQLVDVC 82 (390)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEEC-SSHHHHHHHHHHHTCSEEE----SCHHHHTTCTTCSEEEEC
T ss_pred cEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEc-CCHHHHHHHHHHcCCCccc----CCHHHHhcCCCCCEEEEe
Confidence 45566642222333333333333322223456766654 5667788888888865333 355667764 6888888
Q ss_pred cCCCCChHHHHHHHHhCCcEEEe
Q 003992 612 SISDVLCTATAEALAMGKFVICA 634 (781)
Q Consensus 612 S~~EgfGlviLEAMA~G~PVVaS 634 (781)
+....-.-.+++|+.+|++|+|=
T Consensus 83 tP~~~H~~~~~~al~aGkhVl~E 105 (390)
T 4h3v_A 83 TPGDSHAEIAIAALEAGKHVLCE 105 (390)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEEE
T ss_pred CChHHHHHHHHHHHHcCCCceee
Confidence 87777777899999999999985
No 69
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=45.25 E-value=1.6e+02 Score=26.14 Aligned_cols=108 Identities=9% Similarity=-0.022 Sum_probs=57.6
Q ss_pred CcEEEEEeCCCCH-HHHHHHHHhcCCcEEEcCCCCCHHHHHh--cccEEEEccC-CCCChHHHHHHHH-----hCCcEEE
Q 003992 563 GFKLDVFGNGEDA-YEVQSAAKRLDLNLNFQKGRDHADDSLH--GYKVFINPSI-SDVLCTATAEALA-----MGKFVIC 633 (781)
Q Consensus 563 ~i~LvIVG~Gp~~-~~L~~~a~~lgL~V~FlG~v~~~e~ly~--~ADVfVlPS~-~EgfGlviLEAMA-----~G~PVVa 633 (781)
..+++|+.+-+.. ..+.....+.|..|.........-..+. ..|++++-.. .+.-|+.+++.+. ..+|||.
T Consensus 7 ~~~ILivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~ 86 (154)
T 3gt7_A 7 AGEILIVEDSPTQAEHLKHILEETGYQTEHVRNGREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVIL 86 (154)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTTTCEEEEESSHHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEE
T ss_pred CCcEEEEeCCHHHHHHHHHHHHHCCCEEEEeCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEE
Confidence 4567777754433 5566666666666544322222213333 3566665443 3445777777775 3567776
Q ss_pred eCC-CCcce----eecCCcc--ccCCCHHHHHHHHHHHHhCCCC
Q 003992 634 ADH-PSNEF----FRSFPNC--LTYKTSEDFVARVKEALANDPQ 670 (781)
Q Consensus 634 Sd~-gg~g~----L~~~~ng--v~~~D~eeLa~aI~~LL~d~~~ 670 (781)
... ..... +..+..+ ..+-+.+++..+|..++.....
T Consensus 87 ~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~l~~~~~ 130 (154)
T 3gt7_A 87 LTILSDPRDVVRSLECGADDFITKPCKDVVLASHVKRLLSGVKR 130 (154)
T ss_dssp EECCCSHHHHHHHHHHCCSEEEESSCCHHHHHHHHHHHHHHTCC
T ss_pred EECCCChHHHHHHHHCCCCEEEeCCCCHHHHHHHHHHHHHHHHh
Confidence 432 21110 0011111 3346888999999988865443
No 70
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=42.95 E-value=91 Score=32.61 Aligned_cols=76 Identities=14% Similarity=0.253 Sum_probs=54.9
Q ss_pred HHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHhc--ccEEEEccCCCCChHHHHHHHHh
Q 003992 550 LIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHG--YKVFINPSISDVLCTATAEALAM 627 (781)
Q Consensus 550 LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~--ADVfVlPS~~EgfGlviLEAMA~ 627 (781)
.+.++.. .|+++++-+.+ ++.+..++.++++++.-.| .+.++++.. .|+++..+....-.-.+++|+..
T Consensus 39 ~~~~~~~----~~~~~lvav~d-~~~~~a~~~a~~~g~~~~y----~d~~ell~~~~iDaV~I~tP~~~H~~~~~~al~a 109 (350)
T 4had_A 39 VVPAIQD----AENCVVTAIAS-RDLTRAREMADRFSVPHAF----GSYEEMLASDVIDAVYIPLPTSQHIEWSIKAADA 109 (350)
T ss_dssp HHHHHHH----CSSEEEEEEEC-SSHHHHHHHHHHHTCSEEE----SSHHHHHHCSSCSEEEECSCGGGHHHHHHHHHHT
T ss_pred HHHHHHh----CCCeEEEEEEC-CCHHHHHHHHHHcCCCeee----CCHHHHhcCCCCCEEEEeCCCchhHHHHHHHHhc
Confidence 4455544 37888876654 4667778888888864223 455667765 68888888777767778999999
Q ss_pred CCcEEEe
Q 003992 628 GKFVICA 634 (781)
Q Consensus 628 G~PVVaS 634 (781)
|++|+|=
T Consensus 110 GkhVl~E 116 (350)
T 4had_A 110 GKHVVCE 116 (350)
T ss_dssp TCEEEEC
T ss_pred CCEEEEe
Confidence 9999985
No 71
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=40.72 E-value=70 Score=37.47 Aligned_cols=169 Identities=7% Similarity=-0.043 Sum_probs=97.7
Q ss_pred cCCEEEEcChhhhhc-----CC-CcEEeeCCCC-CC-CC-CCC---cchhhHhhhCcCCCCcEEEEEeeccCc-------
Q 003992 484 YCDKVLRLSAATQDL-----PK-SVICNVHGVN-PK-FL-QIG---EKVATDREQGQQAFSKGAYFLGKMVWA------- 544 (781)
Q Consensus 484 ~aD~VI~vS~~~k~l-----~~-kivvi~nGVD-~~-~f-~p~---~~~~~r~~~Gi~~~~~~ILfVGRL~~~------- 544 (781)
..|.+++.|+...+. .- ...++..|.. .+ ++ ... .....++.++++.++++|+|.-.....
T Consensus 478 ~~D~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~~~~~~~~~~~~~kk~ILyaPT~r~~~~~~~~~ 557 (729)
T 3l7i_A 478 RWDYLISPNRYSTEIFRSAFWMDEERILEIGYPRNDVLVNRANDQEYLDEIRTHLNLPSDKKVIMYAPTWRDDEFVSKGK 557 (729)
T ss_dssp TCSEEEESSHHHHHHHHHHTCCCGGGEEESCCGGGHHHHHSTTCHHHHHHHHHHTTCCSSCEEEEECCCCCGGGCCGGGS
T ss_pred cCCEEEeCCHHHHHHHHHHhCCCcceEEEcCCCchHHHhcccchHHHHHHHHHHhCCCCCCeEEEEeeeeeCCccccccc
Confidence 479999999976542 11 1345556764 11 22 111 123356678888889999998754332
Q ss_pred ------cCHHHHHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCc--EEEcCCCCCHHHHHhcccEEEEccCCCC
Q 003992 545 ------KGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLN--LNFQKGRDHADDSLHGYKVFINPSISDV 616 (781)
Q Consensus 545 ------KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~--V~FlG~v~~~e~ly~~ADVfVlPS~~Eg 616 (781)
.++..|.+.+ . .++.+++-.. | .+.......+.. +......++..++|..||++|. +
T Consensus 558 ~~~~~~~~~~~l~~~l----~--~~~~li~r~H-p---~~~~~~~~~~~~~~~~~~~~~~di~~ll~~aD~lIT----D- 622 (729)
T 3l7i_A 558 YLFELKIDLDNLYKEL----G--DDYVILLRMH-Y---LISNALDLSGYENFAIDVSNYNDVSELFLISDCLIT----D- 622 (729)
T ss_dssp SCCCCTTCHHHHHHHH----T--TTEEEEECCC-H---HHHTTCCCTTCTTTEEECTTCSCHHHHHHTCSEEEE----S-
T ss_pred cccchhhHHHHHHHHc----C--CCeEEEEecC-c---chhccccccccCCcEEeCCCCcCHHHHHHHhCEEEe----e-
Confidence 1233333222 1 3566655432 1 111111111112 5555555677789999999993 2
Q ss_pred ChHHHHHHHHhCCcEEEeCCC-------CcceeecCC---ccccCCCHHHHHHHHHHHHhC
Q 003992 617 LCTATAEALAMGKFVICADHP-------SNEFFRSFP---NCLTYKTSEDFVARVKEALAN 667 (781)
Q Consensus 617 fGlviLEAMA~G~PVVaSd~g-------g~g~L~~~~---ngv~~~D~eeLa~aI~~LL~d 667 (781)
++=++.|++..++|||-.... ..|+..+.. -|-...|.+++.++|......
T Consensus 623 ySSv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d~~~~~pg~~~~~~~eL~~~i~~~~~~ 683 (729)
T 3l7i_A 623 YSSVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMNYMEDLPGPIYTEPYGLAKELKNLDKV 683 (729)
T ss_dssp SCTHHHHHGGGCCCEEEECTTTTTTTSSCCSBSSCTTSSSSSCEESSHHHHHHHHTTHHHH
T ss_pred chHHHHhHHhhCCCEEEecCCHHHHhhccCCcccChhHhCCCCeECCHHHHHHHHhhhhcc
Confidence 466899999999999988322 124432221 223348999999999887653
No 72
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=39.76 E-value=58 Score=28.71 Aligned_cols=90 Identities=16% Similarity=0.172 Sum_probs=54.3
Q ss_pred EEEEeCCCCH----HHHHHHHHhcCCc--EEEcCCCCCHHHHHhcccEEEEccCCCCChHHHHHHHH--hCCcEEEeCCC
Q 003992 566 LDVFGNGEDA----YEVQSAAKRLDLN--LNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALA--MGKFVICADHP 637 (781)
Q Consensus 566 LvIVG~Gp~~----~~L~~~a~~lgL~--V~FlG~v~~~e~ly~~ADVfVlPS~~EgfGlviLEAMA--~G~PVVaSd~g 637 (781)
++++|.|--. ..+++.+++.|++ |.-.+ ....+..+..+|+++........ ..-++..+ .|+||+.-+.-
T Consensus 8 lvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~~-~~~~~~~~~~~D~Ii~t~~l~~~-~~~~~~~~~~~~~pv~~I~~~ 85 (109)
T 2l2q_A 8 LLVCGAGMSTSMLVQRIEKYAKSKNINATIEAIA-ETRLSEVVDRFDVVLLAPQSRFN-KKRLEEITKPKGIPIEIINTI 85 (109)
T ss_dssp EEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEEC-STTHHHHTTTCSEEEECSCCSSH-HHHHHHHHHHHTCCEEECCHH
T ss_pred EEECCChHhHHHHHHHHHHHHHHCCCCeEEEEec-HHHHHhhcCCCCEEEECCccHHH-HHHHHHHhcccCCCEEEEChH
Confidence 4555555432 6777888888877 43333 34455567889988877654322 44444443 58999874221
Q ss_pred CcceeecCCccccCCCHHHHHHHHHHHHhC
Q 003992 638 SNEFFRSFPNCLTYKTSEDFVARVKEALAN 667 (781)
Q Consensus 638 g~g~L~~~~ngv~~~D~eeLa~aI~~LL~d 667 (781)
..+ .-|.+++.+.+.+++..
T Consensus 86 ~y~----------~~d~~~vl~~i~~~l~~ 105 (109)
T 2l2q_A 86 DYG----------TMNGEKVLQLAINAFNN 105 (109)
T ss_dssp HHH----------HTCHHHHHHHHHHHHHH
T ss_pred Hhc----------cCCHHHHHHHHHHHHhc
Confidence 111 14677888888777753
No 73
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=39.01 E-value=79 Score=32.21 Aligned_cols=73 Identities=16% Similarity=0.140 Sum_probs=45.5
Q ss_pred EEEEEeC-CCCHHHHHHHHHhc-CCc-EEEcCCCCCHHHHHh-cccEEEEccCCCCChHHHHHHHHhCCcEEEeCCC
Q 003992 565 KLDVFGN-GEDAYEVQSAAKRL-DLN-LNFQKGRDHADDSLH-GYKVFINPSISDVLCTATAEALAMGKFVICADHP 637 (781)
Q Consensus 565 ~LvIVG~-Gp~~~~L~~~a~~l-gL~-V~FlG~v~~~e~ly~-~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~g 637 (781)
++.|+|. |..-..+.+.+.+. +.+ +-.....++.++++. .+|+.|=.|..+..--.+..|+..|+|+|+...|
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTTG 78 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTG 78 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCCEEEECSCTTTHHHHHHHHHHTTCEEEECCCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCcEEEEccChHHHHHHHHHHHHcCCCEEEcCCC
Confidence 5778884 76666666655543 555 333333344444554 7899996666666544555668899999886443
No 74
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=37.65 E-value=1.8e+02 Score=31.02 Aligned_cols=86 Identities=15% Similarity=0.086 Sum_probs=49.9
Q ss_pred cCCcccccccccccc-----cccccccCCccccCCCCCCCCCCCEEEEEeCccCCCcCcccccHHHH-HHHHHHcCCCEE
Q 003992 272 NINDELDLRIASVLQ-----STGHHYEGGFWTDFGKDDLSDKKRNVAIVTTASLPWMTGTAVNPLFR-AAYLAKTEQQNV 345 (781)
Q Consensus 272 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~rIaI~TtaflP~~~G~av~~l~r-A~~Lak~G~~~V 345 (781)
+.+++|.-+||.-|. .+=.++++|-.. -+.+-+-++..|.|+.+++.|- +- ....+.. +..+.+.+..+|
T Consensus 10 ~~~~~La~~ia~~lg~~l~~~~~~~F~dGE~~--v~i~esvrg~dV~iiqs~~~p~-nd-~lmeLl~~idA~k~asA~rI 85 (326)
T 3s5j_B 10 SSHQDLSQKIADRLGLELGKVVTKKFSNQETC--VEIGESVRGEDVYIVQSGCGEI-ND-NLMELLIMINACKIASASRV 85 (326)
T ss_dssp SSCCHHHHHHHHHTTCCCCCEEEEECTTSCEE--EEECSCCTTCEEEEECCCCSCH-HH-HHHHHHHHHHHHHHTTCSEE
T ss_pred CCCHHHHHHHHHHhCCceeeeEEeECCCCCEE--EEECCCcCCCcEEEEecCCCCc-cH-HHHHHHHHHHHHHhcCCcEE
Confidence 334555556655442 223356666541 2233355678999998877552 11 1222333 334445566799
Q ss_pred EEEeccCCCCCCcccc
Q 003992 346 TLLVPWLCKSDQELVY 361 (781)
Q Consensus 346 tlVvP~l~~~dq~~v~ 361 (781)
|+|+|++..+.|.+.+
T Consensus 86 t~ViPY~~YaRQDr~~ 101 (326)
T 3s5j_B 86 TAVIPCFPYARQDKKD 101 (326)
T ss_dssp EEEESSCTTTTCCSCT
T ss_pred EEeccCccccccCCcC
Confidence 9999999988776654
No 75
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=37.54 E-value=1.5e+02 Score=25.45 Aligned_cols=102 Identities=11% Similarity=0.154 Sum_probs=49.1
Q ss_pred CcEEEEEeCCCCH-HHHHHHHHhcCCcEEEcCCCCCHHHHHh--cccEEEEccCCCCChHHHHHHHHh---CCcEEEeC-
Q 003992 563 GFKLDVFGNGEDA-YEVQSAAKRLDLNLNFQKGRDHADDSLH--GYKVFINPSISDVLCTATAEALAM---GKFVICAD- 635 (781)
Q Consensus 563 ~i~LvIVG~Gp~~-~~L~~~a~~lgL~V~FlG~v~~~e~ly~--~ADVfVlPS~~EgfGlviLEAMA~---G~PVVaSd- 635 (781)
..+++|+.+.+.. ..+.......|..|.......+.-..+. ..|++++| +.-|+.+++.+.. .+|||...
T Consensus 18 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlvi~~---~~~g~~~~~~l~~~~~~~~ii~ls~ 94 (137)
T 2pln_A 18 SMRVLLIEKNSVLGGEIEKGLNVKGFMADVTESLEDGEYLMDIRNYDLVMVS---DKNALSFVSRIKEKHSSIVVLVSSD 94 (137)
T ss_dssp CSEEEEECSCHHHHHHHHHHHHHTTCEEEEESCHHHHHHHHHHSCCSEEEEC---STTHHHHHHHHHHHSTTSEEEEEES
T ss_pred CCeEEEEeCCHHHHHHHHHHHHHcCcEEEEeCCHHHHHHHHHcCCCCEEEEc---CccHHHHHHHHHhcCCCccEEEEeC
Confidence 4566666544332 4455555555555443322222212222 35666632 2335566665543 67776542
Q ss_pred CCCcce----eecCCcc--ccCC-CHHHHHHHHHHHHhC
Q 003992 636 HPSNEF----FRSFPNC--LTYK-TSEDFVARVKEALAN 667 (781)
Q Consensus 636 ~gg~g~----L~~~~ng--v~~~-D~eeLa~aI~~LL~d 667 (781)
...... +..+..+ ..+- +.+++..+|..++..
T Consensus 95 ~~~~~~~~~~~~~g~~~~l~kP~~~~~~l~~~i~~~~~~ 133 (137)
T 2pln_A 95 NPTSEEEVHAFEQGADDYIAKPYRSIKALVARIEARLRF 133 (137)
T ss_dssp SCCHHHHHHHHHTTCSEEEESSCSCHHHHHHHHHHHTC-
T ss_pred CCCHHHHHHHHHcCCceeeeCCCCCHHHHHHHHHHHHhh
Confidence 221110 0011111 2335 899999999988754
No 76
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=37.47 E-value=1.1e+02 Score=32.15 Aligned_cols=71 Identities=17% Similarity=0.252 Sum_probs=50.6
Q ss_pred cCCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHhc--ccEEEEccCCCCChHHHHHHHHhCCcEEEe
Q 003992 560 DLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHG--YKVFINPSISDVLCTATAEALAMGKFVICA 634 (781)
Q Consensus 560 ~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~--ADVfVlPS~~EgfGlviLEAMA~G~PVVaS 634 (781)
..++++++-+-+ ...+..++.+++.++.+.. ..+.++++.. .|+++..+......-.+.+|+..|++|++-
T Consensus 24 ~~~~~~l~av~d-~~~~~~~~~~~~~g~~~~~---~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~vl~E 96 (344)
T 3mz0_A 24 KLSGAEIVAVTD-VNQEAAQKVVEQYQLNATV---YPNDDSLLADENVDAVLVTSWGPAHESSVLKAIKAQKYVFCE 96 (344)
T ss_dssp TCSSEEEEEEEC-SSHHHHHHHHHHTTCCCEE---ESSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEC
T ss_pred hCCCcEEEEEEc-CCHHHHHHHHHHhCCCCee---eCCHHHHhcCCCCCEEEECCCchhHHHHHHHHHHCCCcEEEc
Confidence 346788775543 4566777788877753222 2455667876 899998887776677788999999999984
No 77
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=35.80 E-value=2.5e+02 Score=28.55 Aligned_cols=88 Identities=11% Similarity=0.017 Sum_probs=50.2
Q ss_pred CHHHHHHHHHHhhccCCCc-EEEEEeCCCCH------HHHHHHHHhcCCcEEEcCCCC--CHH----HHHhcccEEEEcc
Q 003992 546 GYRELIDLLAKHKNDLDGF-KLDVFGNGEDA------YEVQSAAKRLDLNLNFQKGRD--HAD----DSLHGYKVFINPS 612 (781)
Q Consensus 546 Gid~LLeA~~~L~~~~p~i-~LvIVG~Gp~~------~~L~~~a~~lgL~V~FlG~v~--~~e----~ly~~ADVfVlPS 612 (781)
.+...++.+.++. |+. ++.++++..+. +.+++.+++.|+.+....... +.. .+....|++..+.
T Consensus 125 ~~~~~l~l~~~l~---P~~k~vgvi~~~~~~~s~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~l~~~~d~i~~~~ 201 (302)
T 3lkv_A 125 PVEQHVELIKEIL---PNVKSIGVVYNPGEANAVSLMELLKLSAAKHGIKLVEATALKSADVQSATQAIAEKSDVIYALI 201 (302)
T ss_dssp CHHHHHHHHHHHS---TTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTCEEEEEECSSGGGHHHHHHHHHTTCSEEEECS
T ss_pred CHHHHHHHHHHhC---CCCCEEEEEeCCCcccHHHHHHHHHHHHHHcCCEEEEEecCChHHHHHHHHhccCCeeEEEEeC
Confidence 3556666666653 332 44455443322 556777888898854443332 222 4456678887775
Q ss_pred CC---CCChHHHHHHHHhCCcEEEeCC
Q 003992 613 IS---DVLCTATAEALAMGKFVICADH 636 (781)
Q Consensus 613 ~~---EgfGlviLEAMA~G~PVVaSd~ 636 (781)
.. ........-+..+++||++.+.
T Consensus 202 d~~~~~~~~~i~~~~~~~~iPv~~~~~ 228 (302)
T 3lkv_A 202 DNTVASAIEGMIVAANQAKTPVFGAAT 228 (302)
T ss_dssp CHHHHHTHHHHHHHHHHTTCCEEESSH
T ss_pred CcchhhHHHHHHHHHhhcCCceeeccc
Confidence 32 1222334456789999999754
No 78
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=35.07 E-value=52 Score=34.10 Aligned_cols=42 Identities=10% Similarity=0.043 Sum_probs=32.9
Q ss_pred CCHHHHHhcccEEEEccCCCCChHHHHHHHHhCCcEEEeCCC
Q 003992 596 DHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHP 637 (781)
Q Consensus 596 ~~~e~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~g 637 (781)
++.++++..+|+.|-.+..+..--.+..|+..|+|||+...|
T Consensus 65 ~dl~~ll~~~DVVIDfT~p~a~~~~~~~al~~G~~vVigTTG 106 (272)
T 4f3y_A 65 DDIERVCAEADYLIDFTLPEGTLVHLDAALRHDVKLVIGTTG 106 (272)
T ss_dssp CCHHHHHHHCSEEEECSCHHHHHHHHHHHHHHTCEEEECCCC
T ss_pred CCHHHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 456678889999998876665555677889999999997665
No 79
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=34.58 E-value=81 Score=31.52 Aligned_cols=89 Identities=11% Similarity=0.051 Sum_probs=58.0
Q ss_pred HHHHHHHHHHhhccCCCcEEEEEeCCC-------CHHHHHHHHHhcCCcEEEcCCCCCHHHHHhcccEEEEccCCC----
Q 003992 547 YRELIDLLAKHKNDLDGFKLDVFGNGE-------DAYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVFINPSISD---- 615 (781)
Q Consensus 547 id~LLeA~~~L~~~~p~i~LvIVG~Gp-------~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~ADVfVlPS~~E---- 615 (781)
++.+.+++..+.+. +.+++++..+. ....+.+..+++|.++..+-..++..+.+..||.+++|- -+
T Consensus 17 l~~~~~~l~~~~~~--~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~v~~~~d~~~~l~~ad~I~lpG-G~~~~~ 93 (229)
T 1fy2_A 17 LEHALPLIANQLNG--RRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTGIHRVADPLAAIEKAEIIIVGG-GNTFQL 93 (229)
T ss_dssp TTTTHHHHHHHHTT--CCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEETTSSSCHHHHHHHCSEEEECC-SCHHHH
T ss_pred HHHHHHHHHHHhcC--CCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEeccccHHHHHhcCCEEEECC-CcHHHH
Confidence 33445555555442 45777777552 124456667778877655544455546889999999996 22
Q ss_pred -------CChHHHHHHHHhCCcEEEeCCCC
Q 003992 616 -------VLCTATAEALAMGKFVICADHPS 638 (781)
Q Consensus 616 -------gfGlviLEAMA~G~PVVaSd~gg 638 (781)
++--.+-|+...|+|++.+-.|.
T Consensus 94 ~~~l~~~gl~~~l~~~~~~G~p~~G~sAG~ 123 (229)
T 1fy2_A 94 LKESRERGLLAPMADRVKRGALYIGWSAGA 123 (229)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCEEEEETHHH
T ss_pred HHHHHHCChHHHHHHHHHcCCEEEEECHHH
Confidence 34446778888999999986663
No 80
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=34.57 E-value=1.9e+02 Score=28.87 Aligned_cols=65 Identities=11% Similarity=-0.072 Sum_probs=35.4
Q ss_pred hcccEEE-EccCCCCChHHHHHHHHhCCcEEEeCCCCccee-ecCCccccCCCHHHHHHHHHHHHhC
Q 003992 603 HGYKVFI-NPSISDVLCTATAEALAMGKFVICADHPSNEFF-RSFPNCLTYKTSEDFVARVKEALAN 667 (781)
Q Consensus 603 ~~ADVfV-lPS~~EgfGlviLEAMA~G~PVVaSd~gg~g~L-~~~~ngv~~~D~eeLa~aI~~LL~d 667 (781)
+..|.+| .|...+...-.+-++...|+|||+.+....+.- ......+..++.+....+...+++.
T Consensus 60 ~~vdgiii~~~~~~~~~~~~~~~~~~giPvV~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~l~~~ 126 (297)
T 3rot_A 60 TYPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDTRPKDKTKNPYLVFLGSDNLLAGKKLGEKALEL 126 (297)
T ss_dssp TCCSEEEECCCCSSTTHHHHHHHHHHTCCEEEESCCCSCTTTSCCSCEEECCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEcCCCccccccCcceEEccChHHHHHHHHHHHHHh
Confidence 3467444 455555555566778889999999876533200 0011123345555555555555543
No 81
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=34.21 E-value=1.6e+02 Score=25.70 Aligned_cols=106 Identities=11% Similarity=-0.061 Sum_probs=58.0
Q ss_pred CcEEEEEeCCCCH-HHHHHHHHhcCCcEEEcCCCCCHHHHHh--cccEEEEccC-CCCChHHHHHHHHh-----CCcEEE
Q 003992 563 GFKLDVFGNGEDA-YEVQSAAKRLDLNLNFQKGRDHADDSLH--GYKVFINPSI-SDVLCTATAEALAM-----GKFVIC 633 (781)
Q Consensus 563 ~i~LvIVG~Gp~~-~~L~~~a~~lgL~V~FlG~v~~~e~ly~--~ADVfVlPS~-~EgfGlviLEAMA~-----G~PVVa 633 (781)
..+++|+.+.+.. ..+.......|..|.......+.-..+. ..|++++=.. .+.-|+.+++.+.. .+|||.
T Consensus 8 ~~~iLivd~~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ 87 (147)
T 2zay_A 8 WWRIMLVDTQLPALAASISALSQEGFDIIQCGNAIEAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIA 87 (147)
T ss_dssp CEEEEEECTTGGGGHHHHHHHHHHTEEEEEESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEE
T ss_pred CceEEEEeCCHHHHHHHHHHHHHcCCeEEEeCCHHHHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEE
Confidence 4677788765543 6666666666655554332222223332 4677766443 34457778888764 567765
Q ss_pred e-CCCCcce----eecCCcc--ccCCCHHHHHHHHHHHHhCC
Q 003992 634 A-DHPSNEF----FRSFPNC--LTYKTSEDFVARVKEALAND 668 (781)
Q Consensus 634 S-d~gg~g~----L~~~~ng--v~~~D~eeLa~aI~~LL~d~ 668 (781)
. ....... +..+..+ ..+-+.+++..+|..++...
T Consensus 88 ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~i~~~~~~~ 129 (147)
T 2zay_A 88 LSGRATAKEEAQLLDMGFIDFIAKPVNAIRLSARIKRVLKLL 129 (147)
T ss_dssp EESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHhCCCCEEEeCCCCHHHHHHHHHHHHHHH
Confidence 4 3322111 0011111 33368888988888887643
No 82
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=33.72 E-value=1.1e+02 Score=32.38 Aligned_cols=85 Identities=13% Similarity=0.190 Sum_probs=47.3
Q ss_pred CCcccccccccccc-----cccccccCCccccCCCCCCCCCCCEEEEEeCccCCCcCcccccHHHH-HHHHHHcCCCEEE
Q 003992 273 INDELDLRIASVLQ-----STGHHYEGGFWTDFGKDDLSDKKRNVAIVTTASLPWMTGTAVNPLFR-AAYLAKTEQQNVT 346 (781)
Q Consensus 273 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~rIaI~TtaflP~~~G~av~~l~r-A~~Lak~G~~~Vt 346 (781)
.+++|.-+||.-|. .+=+++++|-.. -+.+-+-++..|.|+-+++.|- +-. ...+.. +..+-+.+..+||
T Consensus 15 ~~~~La~~ia~~lg~~l~~~~~~~F~dGE~~--v~i~esvrg~dV~iiqs~~~p~-nd~-lmeLl~~idA~k~asA~rIt 90 (319)
T 3dah_A 15 ANPALAQEVVKILGIPLGKAMVSRFSDGEIQ--VEIQENVRGKDVFVLQSTCAPT-NDN-LMELMIMVDALKRASAGRIT 90 (319)
T ss_dssp SCHHHHHHHHHHHTSCCCCEEEEECTTSCEE--EEECSCCBTCEEEEECCCCSSH-HHH-HHHHHHHHHHHHHTTBSEEE
T ss_pred CCHHHHHHHHHHhCCceeeeEEEECCCCCEE--EEECCCcCCCeEEEEccCCCCC-cHH-HHHHHHHHHHHHHcCCcEEE
Confidence 33445555554332 222456666541 1223345578999997766551 111 122223 3445556667999
Q ss_pred EEeccCCCCCCcccc
Q 003992 347 LLVPWLCKSDQELVY 361 (781)
Q Consensus 347 lVvP~l~~~dq~~v~ 361 (781)
+|+|++..+.|.+.+
T Consensus 91 ~ViPY~~YaRQDr~~ 105 (319)
T 3dah_A 91 AAIPYFGYARQDRRP 105 (319)
T ss_dssp EEESSCTTTTCCSCC
T ss_pred EEccCcccccccccc
Confidence 999999987776543
No 83
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=33.14 E-value=1.4e+02 Score=31.23 Aligned_cols=70 Identities=10% Similarity=0.188 Sum_probs=49.5
Q ss_pred CCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHh--cccEEEEccCCCCChHHHHHHHHhCCcEEEeC
Q 003992 561 LDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLH--GYKVFINPSISDVLCTATAEALAMGKFVICAD 635 (781)
Q Consensus 561 ~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~--~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd 635 (781)
.++++++-+-+ ...+..++.+++.++.-.| .+.++++. .+|+++..+......-.+.+|+..|++|++-.
T Consensus 24 ~~~~~l~av~d-~~~~~~~~~~~~~~~~~~~----~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EK 95 (344)
T 3ezy_A 24 IDDAILYAISD-VREDRLREMKEKLGVEKAY----KDPHELIEDPNVDAVLVCSSTNTHSELVIACAKAKKHVFCEK 95 (344)
T ss_dssp STTEEEEEEEC-SCHHHHHHHHHHHTCSEEE----SSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEES
T ss_pred CCCcEEEEEEC-CCHHHHHHHHHHhCCCcee----CCHHHHhcCCCCCEEEEcCCCcchHHHHHHHHhcCCeEEEEC
Confidence 46777775443 4556667777776643222 45567887 78999988877666667889999999999753
No 84
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=32.46 E-value=1.3e+02 Score=31.59 Aligned_cols=69 Identities=13% Similarity=0.093 Sum_probs=49.6
Q ss_pred CCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHH--hcccEEEEccCCCCChHHHHHHHHhCCcEEEeC
Q 003992 561 LDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSL--HGYKVFINPSISDVLCTATAEALAMGKFVICAD 635 (781)
Q Consensus 561 ~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly--~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd 635 (781)
.++++++-+-+ ...+..++.+++.++.. ..+.++++ ...|+++..+....-.-.+.+|+..|++|++-.
T Consensus 27 ~~~~~lvav~d-~~~~~~~~~~~~~g~~~-----~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EK 97 (354)
T 3db2_A 27 SEKLKLVTCYS-RTEDKREKFGKRYNCAG-----DATMEALLAREDVEMVIITVPNDKHAEVIEQCARSGKHIYVEK 97 (354)
T ss_dssp CSSEEEEEEEC-SSHHHHHHHHHHHTCCC-----CSSHHHHHHCSSCCEEEECSCTTSHHHHHHHHHHTTCEEEEES
T ss_pred CCCcEEEEEEC-CCHHHHHHHHHHcCCCC-----cCCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHcCCEEEEcc
Confidence 46788775543 45666777777766432 35666788 458988888877776777889999999999864
No 85
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=32.37 E-value=1.1e+02 Score=29.19 Aligned_cols=36 Identities=19% Similarity=0.251 Sum_probs=24.0
Q ss_pred HHHhcccEEEEccC----CCCChHHHHH---HHHhCCcEEEeC
Q 003992 600 DSLHGYKVFINPSI----SDVLCTATAE---ALAMGKFVICAD 635 (781)
Q Consensus 600 ~ly~~ADVfVlPS~----~EgfGlviLE---AMA~G~PVVaSd 635 (781)
..+..||++|.--. .+.=.-+..| |.|.|+|||+-.
T Consensus 63 ~~i~~aD~vVA~ldpf~g~~~D~GTafEiGyA~AlgKPVi~l~ 105 (161)
T 2f62_A 63 QMIKDCDAVIADLSPFRGHEPDCGTAFEVGCAAALNKMVLTFT 105 (161)
T ss_dssp HHHHHCSEEEEECCCCSSSSCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHhCCEEEEEecCCCCCCCCCcHHHHHHHHHHCCCEEEEEE
Confidence 68899998775521 1222334444 789999999963
No 86
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=31.81 E-value=1.3e+02 Score=31.75 Aligned_cols=90 Identities=13% Similarity=0.058 Sum_probs=58.4
Q ss_pred cEEEEEeeccCccCHHHHHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHh--cccEEEE
Q 003992 533 KGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLH--GYKVFIN 610 (781)
Q Consensus 533 ~~ILfVGRL~~~KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~--~ADVfVl 610 (781)
..+.+||--... ...++.++.+ .++++++-+-+ ...+..++.+++.++.. . .+.++++. ..|+++.
T Consensus 28 ~rigiIG~G~~g--~~~~~~~l~~----~~~~~l~av~d-~~~~~~~~~a~~~g~~~--~---~~~~~ll~~~~~D~V~i 95 (350)
T 3rc1_A 28 IRVGVIGCADIA--WRRALPALEA----EPLTEVTAIAS-RRWDRAKRFTERFGGEP--V---EGYPALLERDDVDAVYV 95 (350)
T ss_dssp EEEEEESCCHHH--HHTHHHHHHH----CTTEEEEEEEE-SSHHHHHHHHHHHCSEE--E---ESHHHHHTCTTCSEEEE
T ss_pred eEEEEEcCcHHH--HHHHHHHHHh----CCCeEEEEEEc-CCHHHHHHHHHHcCCCC--c---CCHHHHhcCCCCCEEEE
Confidence 456677742211 1124455443 36788775543 45566777777777543 1 45666776 4899988
Q ss_pred ccCCCCChHHHHHHHHhCCcEEEe
Q 003992 611 PSISDVLCTATAEALAMGKFVICA 634 (781)
Q Consensus 611 PS~~EgfGlviLEAMA~G~PVVaS 634 (781)
.+....-.-.+.+|+..|++|++=
T Consensus 96 ~tp~~~h~~~~~~al~aGk~Vl~E 119 (350)
T 3rc1_A 96 PLPAVLHAEWIDRALRAGKHVLAE 119 (350)
T ss_dssp CCCGGGHHHHHHHHHHTTCEEEEE
T ss_pred CCCcHHHHHHHHHHHHCCCcEEEe
Confidence 887776667788999999999874
No 87
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=31.69 E-value=2.3e+02 Score=29.86 Aligned_cols=90 Identities=14% Similarity=0.118 Sum_probs=59.2
Q ss_pred cEEEEEeeccCccCHHHHHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHhc--ccEEEE
Q 003992 533 KGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHG--YKVFIN 610 (781)
Q Consensus 533 ~~ILfVGRL~~~KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~--ADVfVl 610 (781)
..+..||-- .-+...++.++.. ++++++-+-+ ...+..++.+++++..-. ..+.++++.. .|+++.
T Consensus 27 irvgiiG~G--~~~~~~~~~~~~~-----~~~~lvav~d-~~~~~a~~~a~~~~~~~~----~~~~~~ll~~~~vD~V~I 94 (361)
T 3u3x_A 27 LRFAAVGLN--HNHIYGQVNCLLR-----AGARLAGFHE-KDDALAAEFSAVYADARR----IATAEEILEDENIGLIVS 94 (361)
T ss_dssp CEEEEECCC--STTHHHHHHHHHH-----TTCEEEEEEC-SCHHHHHHHHHHSSSCCE----ESCHHHHHTCTTCCEEEE
T ss_pred cEEEEECcC--HHHHHHHHHHhhc-----CCcEEEEEEc-CCHHHHHHHHHHcCCCcc----cCCHHHHhcCCCCCEEEE
Confidence 456677732 2344445555532 6788876664 456667777777763211 2466678875 788888
Q ss_pred ccCCCCChHHHHHHHHhCCcEEEe
Q 003992 611 PSISDVLCTATAEALAMGKFVICA 634 (781)
Q Consensus 611 PS~~EgfGlviLEAMA~G~PVVaS 634 (781)
.+....-.-.+.+|+.+|++|+|=
T Consensus 95 ~tp~~~H~~~~~~al~aGkhVl~E 118 (361)
T 3u3x_A 95 AAVSSERAELAIRAMQHGKDVLVD 118 (361)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred eCChHHHHHHHHHHHHCCCeEEEe
Confidence 876655566788999999999985
No 88
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=31.47 E-value=1.2e+02 Score=31.45 Aligned_cols=67 Identities=10% Similarity=0.072 Sum_probs=49.4
Q ss_pred CCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHh--cccEEEEccCCCCChHHHHHHHHhCCcEEEeC
Q 003992 562 DGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLH--GYKVFINPSISDVLCTATAEALAMGKFVICAD 635 (781)
Q Consensus 562 p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~--~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd 635 (781)
++++++-+-+ ...+..++.+++.++. ..+.++++. ..|+++..+......-.+.+|+..|++|++-.
T Consensus 26 ~~~~l~av~d-~~~~~~~~~~~~~~~~------~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EK 94 (331)
T 4hkt_A 26 ADARLVAVAD-AFPAAAEAIAGAYGCE------VRTIDAIEAAADIDAVVICTPTDTHADLIERFARAGKAIFCEK 94 (331)
T ss_dssp TTEEEEEEEC-SSHHHHHHHHHHTTCE------ECCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECS
T ss_pred CCcEEEEEEC-CCHHHHHHHHHHhCCC------cCCHHHHhcCCCCCEEEEeCCchhHHHHHHHHHHcCCcEEEec
Confidence 6777775443 4566677777777743 355667887 78999988877666677889999999999853
No 89
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=30.81 E-value=1.2e+02 Score=31.55 Aligned_cols=69 Identities=13% Similarity=0.080 Sum_probs=49.8
Q ss_pred CCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHh--cccEEEEccCCCCChHHHHHHHHhCCcEEEeC
Q 003992 561 LDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLH--GYKVFINPSISDVLCTATAEALAMGKFVICAD 635 (781)
Q Consensus 561 ~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~--~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd 635 (781)
.++++++-+-+ ...+..++.+++.+. .. ..+.++++. ..|+++..+......-.+.+|+..|++|++-.
T Consensus 26 ~~~~~l~av~d-~~~~~~~~~a~~~g~--~~---~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EK 96 (344)
T 3euw_A 26 NPDLELVVIAD-PFIEGAQRLAEANGA--EA---VASPDEVFARDDIDGIVIGSPTSTHVDLITRAVERGIPALCEK 96 (344)
T ss_dssp CTTEEEEEEEC-SSHHHHHHHHHTTTC--EE---ESSHHHHTTCSCCCEEEECSCGGGHHHHHHHHHHTTCCEEECS
T ss_pred CCCcEEEEEEC-CCHHHHHHHHHHcCC--ce---eCCHHHHhcCCCCCEEEEeCCchhhHHHHHHHHHcCCcEEEEC
Confidence 36777775543 455667777777662 22 245667888 78999988877766777889999999999864
No 90
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=30.80 E-value=2.5e+02 Score=29.04 Aligned_cols=77 Identities=16% Similarity=0.148 Sum_probs=52.3
Q ss_pred HHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHh--cccEEEEccCCCCChHHHHHHHHh
Q 003992 550 LIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLH--GYKVFINPSISDVLCTATAEALAM 627 (781)
Q Consensus 550 LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~--~ADVfVlPS~~EgfGlviLEAMA~ 627 (781)
+++++.+. ++++++-+-+ ...+..++.+++.+.. ....+.++++. ..|+++..+......-.+.+|+..
T Consensus 20 ~~~~l~~~----~~~~l~av~d-~~~~~~~~~~~~~~~~----~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~ 90 (330)
T 3e9m_A 20 FVAGLRES----AQAEVRGIAS-RRLENAQKMAKELAIP----VAYGSYEELCKDETIDIIYIPTYNQGHYSAAKLALSQ 90 (330)
T ss_dssp HHHHHHHS----SSEEEEEEBC-SSSHHHHHHHHHTTCC----CCBSSHHHHHHCTTCSEEEECCCGGGHHHHHHHHHHT
T ss_pred HHHHHHhC----CCcEEEEEEe-CCHHHHHHHHHHcCCC----ceeCCHHHHhcCCCCCEEEEcCCCHHHHHHHHHHHHC
Confidence 45555443 6777775544 3445667777776642 12345667887 789888888776666678899999
Q ss_pred CCcEEEeC
Q 003992 628 GKFVICAD 635 (781)
Q Consensus 628 G~PVVaSd 635 (781)
|++|++-.
T Consensus 91 gk~vl~EK 98 (330)
T 3e9m_A 91 GKPVLLEK 98 (330)
T ss_dssp TCCEEECS
T ss_pred CCeEEEeC
Confidence 99999853
No 91
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=30.03 E-value=4e+02 Score=26.06 Aligned_cols=61 Identities=11% Similarity=-0.081 Sum_probs=32.8
Q ss_pred cccEEE-EccCCCCChHHHHHHHHhCCcEEEeCCCCcceeecCCccccCCCHHHHHHHHHHHHh
Q 003992 604 GYKVFI-NPSISDVLCTATAEALAMGKFVICADHPSNEFFRSFPNCLTYKTSEDFVARVKEALA 666 (781)
Q Consensus 604 ~ADVfV-lPS~~EgfGlviLEAMA~G~PVVaSd~gg~g~L~~~~ngv~~~D~eeLa~aI~~LL~ 666 (781)
..|.+| .|...+...-.+-++...|+|||..+....+. ....++..++.+....+...+++
T Consensus 64 ~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~--~~~~~V~~D~~~~g~~~~~~l~~ 125 (293)
T 3l6u_A 64 KVDAIFITTLDDVYIGSAIEEAKKAGIPVFAIDRMIRSD--AVVSSITSNNQMIGEQLASYIKN 125 (293)
T ss_dssp TCSEEEEECSCTTTTHHHHHHHHHTTCCEEEESSCCCCT--TCSEEEEECHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCChHHHHHHHHHHHHcCCCEEEecCCCCCC--cceeEEecCHHHHHHHHHHHHHH
Confidence 456444 34444444344556668899999987643220 00112344556655555555555
No 92
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=29.68 E-value=2.7e+02 Score=31.69 Aligned_cols=205 Identities=12% Similarity=0.053 Sum_probs=97.9
Q ss_pred cCCCcEEEECC------CchhHHHHHHHHHHhhcC-CEEEEEECCcHHHHHHhhcchhH-HHHHHHHHHH-HHHhcCCEE
Q 003992 418 SKDADIAILEE------PEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGALQ-AFFVKHINNW-VTRAYCDKV 488 (781)
Q Consensus 418 ~~kPDVIhl~~------P~~l~~~~~g~~~akk~~-pvV~ivHt~y~~y~~~~~~~~~~-~~l~k~l~r~-l~r~~aD~V 488 (781)
..+|||++++- -+.+.++-..+.+....+ .-+..+|..+..|.... +..+ ++.-..+... -....+|.+
T Consensus 133 ~~~~dv~i~eiggtvgdies~pf~ea~rq~~~~~g~~n~~~ih~tlvp~~~~~--ge~ktkptqhsv~~Lrs~GIqPdil 210 (535)
T 3nva_A 133 INNAEITLVEIGGTVGDIESLPFLEAVRQLKLEEGEDNVIFVHIALVEYLSVT--GELKTKPLQHSVQELRRIGIQPDFI 210 (535)
T ss_dssp HHTCSEEEEEECSCTTSGGGHHHHHHHHHHHHHHCTTTEEEEEEEECCBCTTT--SSBCCHHHHHHHHHHHHHTCCCSEE
T ss_pred cCCCCEEEEEeCCccchhcccHHHHHHHHHHHHhCCCCEEEEEeeccceecCC--CcccCCchHHHHHHHHhCCCCCCEE
Confidence 36899999862 344444432234444444 34556665443333211 1111 1111111111 123369999
Q ss_pred EEcChh-----hhh-------cCCCcEEeeCCCCCCCCCCC------cchhhHhhhCcCCCCcEEEEEeeccCccCHHHH
Q 003992 489 LRLSAA-----TQD-------LPKSVICNVHGVNPKFLQIG------EKVATDREQGQQAFSKGAYFLGKMVWAKGYREL 550 (781)
Q Consensus 489 I~vS~~-----~k~-------l~~kivvi~nGVD~~~f~p~------~~~~~r~~~Gi~~~~~~ILfVGRL~~~KGid~L 550 (781)
+|=|.. .++ +....++-..++|.-+.-|. -.....+++++....+ .-..+..+
T Consensus 211 vcRs~~~l~~~~r~KiaLfc~V~~~~VI~i~DvdtiY~vpl~L~~qGl~~~~~~~l~l~~~~~---------~~~~w~~~ 281 (535)
T 3nva_A 211 VGRATLPLDDETRRKIALFTNVKVDHIVSSYDVETSYEVPIILESQKLVSKILSRLKLEDRQV---------DLTDWISF 281 (535)
T ss_dssp EEEESSCCCHHHHHHHHHHTTCCGGGEEEEECCSCGGGHHHHHHHHTHHHHHHHHTTCCCCCC---------CCHHHHHH
T ss_pred EEecCCCCCHHHHHhhhhhcCCChhceEecCCCChHHHhHHHHHHCCcHHHHHHHcCCCCCCC---------CHHHHHHH
Confidence 998762 222 12233555567775543221 1112234455432110 01123333
Q ss_pred HHHHHHhhccCCCcEEEEEeCCCCH--------HHHHHHHHhcCCc--EEEcCCC--CC--H--HHHHhcccEEEEccCC
Q 003992 551 IDLLAKHKNDLDGFKLDVFGNGEDA--------YEVQSAAKRLDLN--LNFQKGR--DH--A--DDSLHGYKVFINPSIS 614 (781)
Q Consensus 551 LeA~~~L~~~~p~i~LvIVG~Gp~~--------~~L~~~a~~lgL~--V~FlG~v--~~--~--e~ly~~ADVfVlPS~~ 614 (781)
++.+... .....+++-+||.-... +.|+......+.. |.+.... +. . .+.+..+|.+|+|--.
T Consensus 282 ~~~~~~~-~~~~~v~IalVGKY~~l~DaY~Sv~eAL~hag~~~~~~V~I~wIds~~l~~~~~~~~~~L~~~DgIIlpGG~ 360 (535)
T 3nva_A 282 VNNIKGI-NSKKTINIALVGKYTKLKDSYISIKEAIYHASAYIGVRPKLIWIESTDLESDTKNLNEILGNVNGIIVLPGF 360 (535)
T ss_dssp HHHHHTT-TCCCEEEEEEEESCTTSGGGGHHHHHHHHHHHHHTTCEEEEEEEEGGGGCCSSSCCTTTTTSCSEEEECCCC
T ss_pred HHHhhcc-CCCCeeEEEEEecCcCCchhHHHHHHHHHHHHHHcCCCeEEEEecchhccccccchhhhccCCCEEEECCCC
Confidence 4333310 22235899999975321 4444444455555 6665432 11 1 2468899999888732
Q ss_pred C-----CChHHHHHHHHhCCcEEEe
Q 003992 615 D-----VLCTATAEALAMGKFVICA 634 (781)
Q Consensus 615 E-----gfGlviLEAMA~G~PVVaS 634 (781)
- +.--.+-+|...|+|++..
T Consensus 361 G~~~~~g~i~~ir~a~~~~~PiLGI 385 (535)
T 3nva_A 361 GSRGAEGKIKAIKYAREHNIPFLGI 385 (535)
T ss_dssp SSTTHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCccHHHHHHHHHHHHHcCCcEEEE
Confidence 1 1122355667789999987
No 93
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=29.61 E-value=1.7e+02 Score=31.66 Aligned_cols=87 Identities=17% Similarity=0.049 Sum_probs=48.0
Q ss_pred ccCCcccccc---ccccc-----ccccccccCCccccCCCCCCCCCCCEEEEEeCccCCCcCcccccHHHH-HHHHHHcC
Q 003992 271 DNINDELDLR---IASVL-----QSTGHHYEGGFWTDFGKDDLSDKKRNVAIVTTASLPWMTGTAVNPLFR-AAYLAKTE 341 (781)
Q Consensus 271 ~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~rIaI~TtaflP~~~G~av~~l~r-A~~Lak~G 341 (781)
.+.+++|.=+ ||.-| ..+=.++++|-.. -+.+-+-++..|.|+-+...| .+.. ..-+.. +..+-+.+
T Consensus 35 g~~~~~la~~~~~ia~~lg~~l~~~~~~~F~dGE~~--v~i~esvrg~dV~iiqs~~~~-~nd~-lmeLl~~idA~k~as 110 (379)
T 2ji4_A 35 ANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETR--VQIQESVRGKDVFIIQTVSKD-VNTT-IMELLIMVYACKTSC 110 (379)
T ss_dssp CCCSGGGGHHHHHHHHHHTCCCCCEEEEECTTSCEE--EEECSCCTTCEEEEECCCCSC-HHHH-HHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHhHHHHHHHhCCceEeeEEEECCCCCEE--EEeCCCcCCCEEEEEeCCCCC-ccHH-HHHHHHHHHHHHhcC
Confidence 3444555555 55544 1222467777652 223334567899999876644 2222 222333 33454556
Q ss_pred CCEEEEEeccCCCCCCcccc
Q 003992 342 QQNVTLLVPWLCKSDQELVY 361 (781)
Q Consensus 342 ~~~VtlVvP~l~~~dq~~v~ 361 (781)
..+||+|+|++..+.|.+..
T Consensus 111 A~rit~ViPY~~YaRQdr~~ 130 (379)
T 2ji4_A 111 AKSIIGVIPYFPYSKQCKMR 130 (379)
T ss_dssp CSEEEEECSSCSSCCC----
T ss_pred CceEEEEEeccCcccccccc
Confidence 67999999999988776643
No 94
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=29.26 E-value=1.8e+02 Score=31.10 Aligned_cols=68 Identities=9% Similarity=0.084 Sum_probs=49.0
Q ss_pred CCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHhc--ccEEEEccCCCCChHHHHHHHHhCCcEEEeC
Q 003992 562 DGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHG--YKVFINPSISDVLCTATAEALAMGKFVICAD 635 (781)
Q Consensus 562 p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~--ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd 635 (781)
++++++-+-+ ...+..++.++++++.+ ..+.++++.. .|+++..+....-.-.+.+|+..|++|++-.
T Consensus 26 ~~~~l~av~d-~~~~~~~~~a~~~g~~~-----~~~~~ell~~~~vD~V~i~tp~~~H~~~~~~al~aGk~Vl~EK 95 (387)
T 3moi_A 26 PDAQIVAACD-PNEDVRERFGKEYGIPV-----FATLAEMMQHVQMDAVYIASPHQFHCEHVVQASEQGLHIIVEK 95 (387)
T ss_dssp TTEEEEEEEC-SCHHHHHHHHHHHTCCE-----ESSHHHHHHHSCCSEEEECSCGGGHHHHHHHHHHTTCEEEECS
T ss_pred CCeEEEEEEe-CCHHHHHHHHHHcCCCe-----ECCHHHHHcCCCCCEEEEcCCcHHHHHHHHHHHHCCCceeeeC
Confidence 6777775554 45566667777777542 2456667775 8999988877666667889999999999864
No 95
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=28.96 E-value=2.1e+02 Score=31.05 Aligned_cols=74 Identities=18% Similarity=0.133 Sum_probs=42.3
Q ss_pred CCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcC----------CCCCHHHHHhcccEEEE--ccCCC----C---ChHHHH
Q 003992 562 DGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQK----------GRDHADDSLHGYKVFIN--PSISD----V---LCTATA 622 (781)
Q Consensus 562 p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG----------~v~~~e~ly~~ADVfVl--PS~~E----g---fGlviL 622 (781)
.+.++-|+|-|.--..+.+.++..|.+|.... .....++++..||++++ |...+ + ++-..+
T Consensus 115 ~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~~~~l 194 (380)
T 2o4c_A 115 AERTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAREPDGEFVSLERLLAEADVISLHTPLNRDGEHPTRHLLDEPRL 194 (380)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHHSTTSCCCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBCHHHH
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhhhccCcccCCHHHHHHhCCEEEEeccCccccccchhhhcCHHHH
Confidence 34566666666655555555555665543321 12345578999998776 33333 3 344566
Q ss_pred HHHHhCCcEEEeC
Q 003992 623 EALAMGKFVICAD 635 (781)
Q Consensus 623 EAMA~G~PVVaSd 635 (781)
.+|-.|.-+|-+.
T Consensus 195 ~~mk~gailIN~s 207 (380)
T 2o4c_A 195 AALRPGTWLVNAS 207 (380)
T ss_dssp HTSCTTEEEEECS
T ss_pred hhCCCCcEEEECC
Confidence 7776666555443
No 96
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=28.48 E-value=1.8e+02 Score=30.39 Aligned_cols=91 Identities=20% Similarity=0.120 Sum_probs=58.5
Q ss_pred cEEEEEeeccCccCHHHHHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHh--cccEEEE
Q 003992 533 KGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLH--GYKVFIN 610 (781)
Q Consensus 533 ~~ILfVGRL~~~KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~--~ADVfVl 610 (781)
..+.++|--...+ ..+.++.+. .++++++-+-+ ...+..++.+++.++ .. ..+.++++. ..|+++.
T Consensus 14 ~rvgiiG~G~~g~---~~~~~l~~~---~~~~~lvav~d-~~~~~~~~~~~~~~~--~~---~~~~~~ll~~~~~D~V~i 81 (354)
T 3q2i_A 14 IRFALVGCGRIAN---NHFGALEKH---ADRAELIDVCD-IDPAALKAAVERTGA--RG---HASLTDMLAQTDADIVIL 81 (354)
T ss_dssp EEEEEECCSTTHH---HHHHHHHHT---TTTEEEEEEEC-SSHHHHHHHHHHHCC--EE---ESCHHHHHHHCCCSEEEE
T ss_pred ceEEEEcCcHHHH---HHHHHHHhC---CCCeEEEEEEc-CCHHHHHHHHHHcCC--ce---eCCHHHHhcCCCCCEEEE
Confidence 4566777522221 234555443 25777764443 456667777777774 22 245666776 7899988
Q ss_pred ccCCCCChHHHHHHHHhCCcEEEeC
Q 003992 611 PSISDVLCTATAEALAMGKFVICAD 635 (781)
Q Consensus 611 PS~~EgfGlviLEAMA~G~PVVaSd 635 (781)
.+......-.+.+|+..|++|++-.
T Consensus 82 ~tp~~~h~~~~~~al~~gk~v~~EK 106 (354)
T 3q2i_A 82 TTPSGLHPTQSIECSEAGFHVMTEK 106 (354)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEECS
T ss_pred CCCcHHHHHHHHHHHHCCCCEEEeC
Confidence 8876666667889999999999853
No 97
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=28.33 E-value=1e+02 Score=32.54 Aligned_cols=130 Identities=13% Similarity=0.149 Sum_probs=73.8
Q ss_pred HHHHhcCCEEEEcCh---hhhhcCC-CcEEeeCCCCCCCCCCCc----chhhHhhhCcCCCCcEEEEEeeccCccCHHHH
Q 003992 479 WVTRAYCDKVLRLSA---ATQDLPK-SVICNVHGVNPKFLQIGE----KVATDREQGQQAFSKGAYFLGKMVWAKGYREL 550 (781)
Q Consensus 479 ~l~r~~aD~VI~vS~---~~k~l~~-kivvi~nGVD~~~f~p~~----~~~~r~~~Gi~~~~~~ILfVGRL~~~KGid~L 550 (781)
.+.+ |+|.|+.=.. ....+.+ ..+-++||-|....+|.. -...++.+|-- ....|.|||-+....=..-+
T Consensus 92 vls~-~~D~iviR~~~~~~~~~lA~~~~vPVINag~g~~~HPtQ~LaDl~Ti~e~~g~l-~glkva~vGD~~~~rva~Sl 169 (306)
T 4ekn_B 92 VISG-YADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRI-DGIKIAFVGDLKYGRTVHSL 169 (306)
T ss_dssp HHHH-HCSEEEEECSSTTHHHHHHHHCSSCEEESCSSSSCCHHHHHHHHHHHHHHHSCS-TTCEEEEESCTTTCHHHHHH
T ss_pred HHHH-hCcEEEEEcCChHHHHHHHHhCCCCEEeCCCCCCcCcHHHHHHHHHHHHHhCCc-CCCEEEEEcCCCCCcHHHHH
Confidence 3444 6798776544 2233322 224467887765555642 22345556532 35678899966433323445
Q ss_pred HHHHHHhhccCCCcEEEEEeCCCC--HHHHHHHHHhcCCcEEEcCCCCCHHHHHhcccEEEEccCC-CCC
Q 003992 551 IDLLAKHKNDLDGFKLDVFGNGED--AYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVFINPSIS-DVL 617 (781)
Q Consensus 551 LeA~~~L~~~~p~i~LvIVG~Gp~--~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~ADVfVlPS~~-Egf 617 (781)
+.++.+ .+++++.+++.-.. .+.+.+.+++.|..+... ++.++.+..|||+...... |.|
T Consensus 170 ~~~~~~----~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~---~d~~eav~~aDvvy~~~~q~er~ 232 (306)
T 4ekn_B 170 VYALSL----FENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEK---ESLDDLDDDIDVLYVTRIQKERF 232 (306)
T ss_dssp HHHHHT----SSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEE---SCGGGCCTTCSEEEECCCCGGGC
T ss_pred HHHHHh----cCCCEEEEECCcccccCHHHHHHHHHcCCEEEEE---cCHHHHhcCCCEEEeCCcccccC
Confidence 555554 34688999984221 255656666677665543 3444578899988876542 444
No 98
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=27.68 E-value=2e+02 Score=28.96 Aligned_cols=63 Identities=19% Similarity=0.107 Sum_probs=33.7
Q ss_pred hcccEEEEcc-CCCCChHHHHHHHHhCCcEEEeCCCCcceeecCCccccCCCHHHHHHHHHHHHh
Q 003992 603 HGYKVFINPS-ISDVLCTATAEALAMGKFVICADHPSNEFFRSFPNCLTYKTSEDFVARVKEALA 666 (781)
Q Consensus 603 ~~ADVfVlPS-~~EgfGlviLEAMA~G~PVVaSd~gg~g~L~~~~ngv~~~D~eeLa~aI~~LL~ 666 (781)
+..|.+|+.. ..+...-.+-++...|+|||..+....+. ......+..++.+.-..+...|++
T Consensus 58 ~~vdgiIi~~~~~~~~~~~~~~~~~~giPvV~~~~~~~~~-~~~~~~V~~D~~~~g~~a~~~l~~ 121 (330)
T 3uug_A 58 KGVKVLVIASIDGTTLSDVLKQAGEQGIKVIAYDRLIRNS-GDVSYYATFDNFQVGVLQATSITD 121 (330)
T ss_dssp HTCSEEEECCSSGGGGHHHHHHHHHTTCEEEEESSCCCSC-TTCCEEEEECHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCchhHHHHHHHHHHCCCCEEEECCCCCCC-CceeEEEEeCHHHHHHHHHHHHHH
Confidence 3566555433 33344445667788999999987643220 000011333555555555555555
No 99
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=27.50 E-value=2.9e+02 Score=23.66 Aligned_cols=103 Identities=9% Similarity=-0.027 Sum_probs=53.5
Q ss_pred cEEEEEeCCCCH-HHHHHHHHhcCCcEEEcCCCCCHHHHHh----cccEEEEccC-CCCChHHHHHHHHh---CCcEEEe
Q 003992 564 FKLDVFGNGEDA-YEVQSAAKRLDLNLNFQKGRDHADDSLH----GYKVFINPSI-SDVLCTATAEALAM---GKFVICA 634 (781)
Q Consensus 564 i~LvIVG~Gp~~-~~L~~~a~~lgL~V~FlG~v~~~e~ly~----~ADVfVlPS~-~EgfGlviLEAMA~---G~PVVaS 634 (781)
.+++|+.+.+.. ..++......+..|............+. ..|++++-.. .+.-|+.+++.+.. .+|||..
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~~g~~v~~~~~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~l 83 (143)
T 3jte_A 4 AKILVIDDESTILQNIKFLLEIDGNEVLTASSSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIIL 83 (143)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEE
T ss_pred CEEEEEcCCHHHHHHHHHHHHhCCceEEEeCCHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEE
Confidence 466777654432 5566666666665544332222223343 4676665433 34456666666543 5677654
Q ss_pred CC-CCcce----eecCCcc--ccCCCHHHHHHHHHHHHh
Q 003992 635 DH-PSNEF----FRSFPNC--LTYKTSEDFVARVKEALA 666 (781)
Q Consensus 635 d~-gg~g~----L~~~~ng--v~~~D~eeLa~aI~~LL~ 666 (781)
.. ..... +..+..+ ..+-+.+++..+|..++.
T Consensus 84 s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~l~~~~~ 122 (143)
T 3jte_A 84 TGHGDLDNAILAMKEGAFEYLRKPVTAQDLSIAINNAIN 122 (143)
T ss_dssp ECTTCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHhCcceeEeCCCCHHHHHHHHHHHHH
Confidence 22 21100 0011111 333678888888888775
No 100
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=26.48 E-value=32 Score=35.10 Aligned_cols=52 Identities=21% Similarity=0.140 Sum_probs=24.8
Q ss_pred cccccCCccccCCCCCCCCCCCEEEEEeCccCCCcCcccccHHHHHHHHHHcCCCEEEEEec
Q 003992 289 GHHYEGGFWTDFGKDDLSDKKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVP 350 (781)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~rIaI~TtaflP~~~G~av~~l~rA~~Lak~G~~~VtlVvP 350 (781)
||..+...+..+........+++|+|+ |....-+.-|..|++.|+ +|+++-.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~vvII---------G~G~aGl~aA~~l~~~g~-~v~vie~ 53 (338)
T 3itj_A 2 GSSHHHHHHSSGLVPRGSHVHNKVTII---------GSGPAAHTAAIYLARAEI-KPILYEG 53 (338)
T ss_dssp -------------------CEEEEEEE---------CCSHHHHHHHHHHHHTTC-CCEEECC
T ss_pred CccccccccccCCCCCCCCCCCCEEEE---------CcCHHHHHHHHHHHHCCC-CEEEEec
Confidence 344455556555556556667899999 333345667889999986 8998854
No 101
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=25.92 E-value=1.5e+02 Score=31.30 Aligned_cols=92 Identities=18% Similarity=0.231 Sum_probs=57.1
Q ss_pred cEEEEEeeccCccCHHHHHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHh--cccEEEE
Q 003992 533 KGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLH--GYKVFIN 610 (781)
Q Consensus 533 ~~ILfVGRL~~~KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~--~ADVfVl 610 (781)
..+.+||--...+ ..+.++. ...++++++-+-+ .+.+..++.+++.++.+.. ..+.++++. ..|+++.
T Consensus 24 ~rvgiIG~G~~g~---~~~~~l~---~~~~~~~lvav~d-~~~~~~~~~a~~~g~~~~~---~~~~~~ll~~~~~D~V~i 93 (357)
T 3ec7_A 24 LKAGIVGIGMIGS---DHLRRLA---NTVSGVEVVAVCD-IVAGRAQAALDKYAIEAKD---YNDYHDLINDKDVEVVII 93 (357)
T ss_dssp EEEEEECCSHHHH---HHHHHHH---HTCTTEEEEEEEC-SSTTHHHHHHHHHTCCCEE---ESSHHHHHHCTTCCEEEE
T ss_pred eeEEEECCcHHHH---HHHHHHH---hhCCCcEEEEEEe-CCHHHHHHHHHHhCCCCee---eCCHHHHhcCCCCCEEEE
Confidence 3566776422111 2333333 2346788875544 3344556667777743222 245566777 4899998
Q ss_pred ccCCCCChHHHHHHHHhCCcEEEe
Q 003992 611 PSISDVLCTATAEALAMGKFVICA 634 (781)
Q Consensus 611 PS~~EgfGlviLEAMA~G~PVVaS 634 (781)
.+....-.-.+.+|+..|++|++-
T Consensus 94 ~tp~~~h~~~~~~al~aGk~Vl~E 117 (357)
T 3ec7_A 94 TASNEAHADVAVAALNANKYVFCE 117 (357)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEEE
T ss_pred cCCcHHHHHHHHHHHHCCCCEEee
Confidence 887776677788999999999975
No 102
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=25.44 E-value=2.8e+02 Score=28.63 Aligned_cols=91 Identities=19% Similarity=0.195 Sum_probs=56.6
Q ss_pred cEEEEEeeccCccCHHHHHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHh--cccEEEE
Q 003992 533 KGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLH--GYKVFIN 610 (781)
Q Consensus 533 ~~ILfVGRL~~~KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~--~ADVfVl 610 (781)
..+..+|--.- |. ..+.++. +..++++++.+-+ ...+..+..+++.+....+ ++.++++. .+|+++.
T Consensus 9 ~~v~iiG~G~i--g~-~~~~~l~---~~~~~~~~vav~d-~~~~~~~~~a~~~g~~~~~----~~~~~~l~~~~~D~V~i 77 (346)
T 3cea_A 9 LRAAIIGLGRL--GE-RHARHLV---NKIQGVKLVAACA-LDSNQLEWAKNELGVETTY----TNYKDMIDTENIDAIFI 77 (346)
T ss_dssp EEEEEECCSTT--HH-HHHHHHH---HTCSSEEEEEEEC-SCHHHHHHHHHTTCCSEEE----SCHHHHHTTSCCSEEEE
T ss_pred ceEEEEcCCHH--HH-HHHHHHH---hcCCCcEEEEEec-CCHHHHHHHHHHhCCCccc----CCHHHHhcCCCCCEEEE
Confidence 45667774221 11 2334433 1236777765543 4556677777776653222 34556776 6899988
Q ss_pred ccCCCCChHHHHHHHHhCCcEEEe
Q 003992 611 PSISDVLCTATAEALAMGKFVICA 634 (781)
Q Consensus 611 PS~~EgfGlviLEAMA~G~PVVaS 634 (781)
.+......-.+.+|+..|++|++-
T Consensus 78 ~tp~~~h~~~~~~al~~G~~v~~e 101 (346)
T 3cea_A 78 VAPTPFHPEMTIYAMNAGLNVFCE 101 (346)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEEC
T ss_pred eCChHhHHHHHHHHHHCCCEEEEc
Confidence 887666666778999999999983
No 103
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=24.82 E-value=1.6e+02 Score=31.24 Aligned_cols=38 Identities=16% Similarity=0.195 Sum_probs=23.3
Q ss_pred CHHHHHhcccEEEE--ccCCCCC---hHHHHHHHHhCCcEEEe
Q 003992 597 HADDSLHGYKVFIN--PSISDVL---CTATAEALAMGKFVICA 634 (781)
Q Consensus 597 ~~e~ly~~ADVfVl--PS~~Egf---GlviLEAMA~G~PVVaS 634 (781)
..+++++.||++++ |...|+. +-..+..|--|.-+|-+
T Consensus 187 ~l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~ 229 (334)
T 3kb6_A 187 SLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINT 229 (334)
T ss_dssp CHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEEC
T ss_pred CHHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEec
Confidence 34579999997764 4445554 44566666555555544
No 104
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=24.57 E-value=3.4e+02 Score=23.35 Aligned_cols=104 Identities=13% Similarity=0.097 Sum_probs=54.4
Q ss_pred CcEEEEEeCCCC-HHHHHHHHHhcCCc--EEEcCCCCCHHHHHh--cccEEEEccC-CCCChHHHHHHHHh-----CCcE
Q 003992 563 GFKLDVFGNGED-AYEVQSAAKRLDLN--LNFQKGRDHADDSLH--GYKVFINPSI-SDVLCTATAEALAM-----GKFV 631 (781)
Q Consensus 563 ~i~LvIVG~Gp~-~~~L~~~a~~lgL~--V~FlG~v~~~e~ly~--~ADVfVlPS~-~EgfGlviLEAMA~-----G~PV 631 (781)
..+++|+.+-+. ...+.......+.. |.........-..+. ..|++++=.. .+.-|+.+++.+.. ++||
T Consensus 5 ~~~ILivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pi 84 (144)
T 3kht_A 5 SKRVLVVEDNPDDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPI 84 (144)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHHTTCCEEEEEESSHHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCE
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhcCCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCE
Confidence 456777765443 25566666666665 333332222223333 2566665433 34457778887764 5777
Q ss_pred EEeCCCCc-ce----eecCCcc--ccCC-CHHHHHHHHHHHHh
Q 003992 632 ICADHPSN-EF----FRSFPNC--LTYK-TSEDFVARVKEALA 666 (781)
Q Consensus 632 VaSd~gg~-g~----L~~~~ng--v~~~-D~eeLa~aI~~LL~ 666 (781)
|....... .. +..+..+ ..+. +.+++.++|..++.
T Consensus 85 i~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~~l~~~i~~~l~ 127 (144)
T 3kht_A 85 VILTDNVSDDRAKQCMAAGASSVVDKSSNNVTDFYGRIYAIFS 127 (144)
T ss_dssp EEEETTCCHHHHHHHHHTTCSEEEECCTTSHHHHHHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHcCCCEEEECCCCcHHHHHHHHHHHHH
Confidence 76533211 10 0111111 2335 78888888887764
No 105
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=24.47 E-value=3.6e+02 Score=26.71 Aligned_cols=63 Identities=8% Similarity=-0.088 Sum_probs=34.2
Q ss_pred hcccEEEE-ccCCCCChHHHHHHHHhCCcEEEeCCCCcceeecCCccccCCCHHHHHHHHHHHHhC
Q 003992 603 HGYKVFIN-PSISDVLCTATAEALAMGKFVICADHPSNEFFRSFPNCLTYKTSEDFVARVKEALAN 667 (781)
Q Consensus 603 ~~ADVfVl-PS~~EgfGlviLEAMA~G~PVVaSd~gg~g~L~~~~ngv~~~D~eeLa~aI~~LL~d 667 (781)
...|.+|+ |...+...-.+-++...|+|||+.+....+. ..-.++..++.+....+...|++.
T Consensus 60 ~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~--~~~~~V~~d~~~~g~~~~~~l~~~ 123 (305)
T 3g1w_A 60 KNPAGIAISAIDPVELTDTINKAVDAGIPIVLFDSGAPDS--HAHSFLGTNNYNAGMNAAYKMAEL 123 (305)
T ss_dssp HCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCCTTS--CCSCEEECCHHHHHHHHHHHHHHH
T ss_pred hCCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEECCCCCCC--ceeEEECcCHHHHHHHHHHHHHHH
Confidence 34675554 4344444445666778999999987643211 001124445555555555555554
No 106
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=24.11 E-value=3.1e+02 Score=27.44 Aligned_cols=60 Identities=20% Similarity=0.194 Sum_probs=32.6
Q ss_pred cccEEE-EccCCCCChHHHHHHHHhCCcEEEeCCCCcceeecCCccccCCCHHHHHHHHHHHH
Q 003992 604 GYKVFI-NPSISDVLCTATAEALAMGKFVICADHPSNEFFRSFPNCLTYKTSEDFVARVKEAL 665 (781)
Q Consensus 604 ~ADVfV-lPS~~EgfGlviLEAMA~G~PVVaSd~gg~g~L~~~~ngv~~~D~eeLa~aI~~LL 665 (781)
.+|.+| .|...+...-.+-++...|+|||+.+....+.- ....+..++.+.-..+...|+
T Consensus 58 ~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~--~~~~V~~D~~~~g~~a~~~L~ 118 (313)
T 3m9w_A 58 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD--IDFYISFDNEKVGELQAKALV 118 (313)
T ss_dssp TCSEEEEECSSTTSCHHHHHHHHTTTCEEEEESSCCTTSC--CSEEEEECHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCChhhhHHHHHHHHHCCCeEEEECCcCCCCC--ceEEEecCHHHHHHHHHHHHH
Confidence 456444 444444444455666678999999876432210 001133455666666666666
No 107
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=24.08 E-value=1.9e+02 Score=28.60 Aligned_cols=60 Identities=15% Similarity=-0.023 Sum_probs=32.8
Q ss_pred hcccEEEE-ccCCCCChHHHHHHHHhCCcEEEeCCCCcceeecCCccccCCCHHHHHHHHHHHHh
Q 003992 603 HGYKVFIN-PSISDVLCTATAEALAMGKFVICADHPSNEFFRSFPNCLTYKTSEDFVARVKEALA 666 (781)
Q Consensus 603 ~~ADVfVl-PS~~EgfGlviLEAMA~G~PVVaSd~gg~g~L~~~~ngv~~~D~eeLa~aI~~LL~ 666 (781)
..+|.+|+ |...+...-.+-++...|+|||+.+....+. ..++..++.+....+...+++
T Consensus 60 ~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~----~~~V~~D~~~~g~~~~~~l~~ 120 (291)
T 3l49_A 60 QKPDAIIEQLGNLDVLNPWLQKINDAGIPLFTVDTATPHA----INNTTSNNYSIGAELALQMVA 120 (291)
T ss_dssp HCCSEEEEESSCHHHHHHHHHHHHHTTCCEEEESCCCTTC----SEEEEECHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCChhhhHHHHHHHHHCCCcEEEecCCCCCc----CceEecChHHHHHHHHHHHHH
Confidence 34665554 3322223334555677899999987653221 112444556666666666665
No 108
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=24.03 E-value=2.6e+02 Score=29.10 Aligned_cols=92 Identities=14% Similarity=0.026 Sum_probs=58.7
Q ss_pred CcEEEEEeec-cCccCHHHHHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHh--cccEE
Q 003992 532 SKGAYFLGKM-VWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLH--GYKVF 608 (781)
Q Consensus 532 ~~~ILfVGRL-~~~KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~--~ADVf 608 (781)
...+..+|-- ...+. .+.++.++ .++++++-+-+ .+.+..++.+++++..-. ..+.++++. ..|++
T Consensus 18 ~irvgiIG~G~~~g~~---~~~~l~~~---~~~~~lvav~d-~~~~~~~~~a~~~~~~~~----~~~~~~ll~~~~vD~V 86 (340)
T 1zh8_A 18 KIRLGIVGCGIAAREL---HLPALKNL---SHLFEITAVTS-RTRSHAEEFAKMVGNPAV----FDSYEELLESGLVDAV 86 (340)
T ss_dssp CEEEEEECCSHHHHHT---HHHHHHTT---TTTEEEEEEEC-SSHHHHHHHHHHHSSCEE----ESCHHHHHHSSCCSEE
T ss_pred ceeEEEEecCHHHHHH---HHHHHHhC---CCceEEEEEEc-CCHHHHHHHHHHhCCCcc----cCCHHHHhcCCCCCEE
Confidence 4556777753 22222 34444332 25778865554 456667777777774212 245666776 47988
Q ss_pred EEccCCCCChHHHHHHHHhCCcEEEe
Q 003992 609 INPSISDVLCTATAEALAMGKFVICA 634 (781)
Q Consensus 609 VlPS~~EgfGlviLEAMA~G~PVVaS 634 (781)
+..+....-.-.+.+|+..|++|++-
T Consensus 87 ~i~tp~~~H~~~~~~al~aGkhVl~E 112 (340)
T 1zh8_A 87 DLTLPVELNLPFIEKALRKGVHVICE 112 (340)
T ss_dssp EECCCGGGHHHHHHHHHHTTCEEEEE
T ss_pred EEeCCchHHHHHHHHHHHCCCcEEEe
Confidence 88887666666788999999999984
No 109
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=23.96 E-value=2.2e+02 Score=29.90 Aligned_cols=91 Identities=10% Similarity=0.060 Sum_probs=58.0
Q ss_pred cEEEEEeeccCccCHHHHHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCc--EEEcCCCCCHHHHHh--cccEE
Q 003992 533 KGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLN--LNFQKGRDHADDSLH--GYKVF 608 (781)
Q Consensus 533 ~~ILfVGRL~~~KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~--V~FlG~v~~~e~ly~--~ADVf 608 (781)
..+..+|--.-. ..+++++.. .++++++.+-+ ...+..+..+++.++. +... .+.++++. ..|++
T Consensus 7 ~~vgiiG~G~ig---~~~~~~l~~----~~~~~lv~v~d-~~~~~~~~~a~~~~~~~~~~~~---~~~~~ll~~~~~D~V 75 (362)
T 1ydw_A 7 IRIGVMGCADIA---RKVSRAIHL----APNATISGVAS-RSLEKAKAFATANNYPESTKIH---GSYESLLEDPEIDAL 75 (362)
T ss_dssp EEEEEESCCTTH---HHHHHHHHH----CTTEEEEEEEC-SSHHHHHHHHHHTTCCTTCEEE---SSHHHHHHCTTCCEE
T ss_pred eEEEEECchHHH---HHHHHHHhh----CCCcEEEEEEc-CCHHHHHHHHHHhCCCCCCeee---CCHHHHhcCCCCCEE
Confidence 345566642211 134555543 36777765554 4556677777777741 2222 35556776 48999
Q ss_pred EEccCCCCChHHHHHHHHhCCcEEEe
Q 003992 609 INPSISDVLCTATAEALAMGKFVICA 634 (781)
Q Consensus 609 VlPS~~EgfGlviLEAMA~G~PVVaS 634 (781)
+..+......-.+.+|+..|++|++-
T Consensus 76 ~i~tp~~~h~~~~~~al~aGk~V~~E 101 (362)
T 1ydw_A 76 YVPLPTSLHVEWAIKAAEKGKHILLE 101 (362)
T ss_dssp EECCCGGGHHHHHHHHHTTTCEEEEC
T ss_pred EEcCChHHHHHHHHHHHHCCCeEEEe
Confidence 98887766667788999999999984
No 110
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=23.73 E-value=2.1e+02 Score=29.42 Aligned_cols=69 Identities=17% Similarity=0.183 Sum_probs=47.7
Q ss_pred CCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHH-hcccEEEEccCCCCChHHHHHHHHhCCcEEEeC
Q 003992 562 DGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSL-HGYKVFINPSISDVLCTATAEALAMGKFVICAD 635 (781)
Q Consensus 562 p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly-~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd 635 (781)
++++++.+-+ ...+..++.+++.+....+ .+.++++ ...|+++..+......-.+.+|+..|++|++-.
T Consensus 24 ~~~~~~~v~d-~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~D~V~i~tp~~~h~~~~~~al~~gk~V~~EK 93 (325)
T 2ho3_A 24 GEYQLVAIYS-RKLETAATFASRYQNIQLF----DQLEVFFKSSFDLVYIASPNSLHFAQAKAALSAGKHVILEK 93 (325)
T ss_dssp TSEEEEEEEC-SSHHHHHHHGGGSSSCEEE----SCHHHHHTSSCSEEEECSCGGGHHHHHHHHHHTTCEEEEES
T ss_pred CCeEEEEEEe-CCHHHHHHHHHHcCCCeEe----CCHHHHhCCCCCEEEEeCChHHHHHHHHHHHHcCCcEEEec
Confidence 5677765443 4556666667666642122 3555677 578999988877766777889999999999853
No 111
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=23.47 E-value=1.5e+02 Score=30.57 Aligned_cols=34 Identities=9% Similarity=-0.043 Sum_probs=20.3
Q ss_pred cccEEEEccCCCCChHHHHHHHHhCCcEEEeCCC
Q 003992 604 GYKVFINPSISDVLCTATAEALAMGKFVICADHP 637 (781)
Q Consensus 604 ~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~g 637 (781)
..|.+|+........-.+-++...|+|||+.+..
T Consensus 62 ~vDgiIi~~~~~~~~~~~~~~~~~giPvV~~~~~ 95 (350)
T 3h75_A 62 KPDYLMLVNEQYVAPQILRLSQGSGIKLFIVNSP 95 (350)
T ss_dssp CCSEEEEECCSSHHHHHHHHHTTSCCEEEEEESC
T ss_pred CCCEEEEeCchhhHHHHHHHHHhCCCcEEEEcCC
Confidence 6775555432222223344556789999998765
No 112
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=22.84 E-value=44 Score=29.57 Aligned_cols=91 Identities=10% Similarity=-0.016 Sum_probs=50.8
Q ss_pred EEEEEeCCCCH----HHHHHHHHhcCCcEEE-cCCCCCHHHHHhcccEEEEccCCCCChHHHHHHHHhCCcEEEeCCCCc
Q 003992 565 KLDVFGNGEDA----YEVQSAAKRLDLNLNF-QKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSN 639 (781)
Q Consensus 565 ~LvIVG~Gp~~----~~L~~~a~~lgL~V~F-lG~v~~~e~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~ 639 (781)
-|+++|.|-.. ..+++.+++.|+++.. ..........+..+|++++.... .+-..-++..+-.+||-.- .+.
T Consensus 6 Ill~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~~~~~~~~~~~~Dvil~~pqv-~~~~~~~~~~~~~~~v~vI--~~~ 82 (106)
T 1e2b_A 6 IYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQI-AYMLPEIQRLLPNKPVEVI--DSL 82 (106)
T ss_dssp EEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEECSSSTTHHHHHCSEEEECTTS-GGGHHHHHHHSSSSCCCBC--CHH
T ss_pred EEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEecHHHHHhhccCCCEEEEccch-hhhHHHHHHHhcCCCceEE--CHH
Confidence 36677777553 6777888889988332 23344444567889988876543 3334445554433333331 122
Q ss_pred ceeecCCccccCCCHHHHHHHHHHHHh
Q 003992 640 EFFRSFPNCLTYKTSEDFVARVKEALA 666 (781)
Q Consensus 640 g~L~~~~ngv~~~D~eeLa~aI~~LL~ 666 (781)
.+. .-|.+.+.+.+..++.
T Consensus 83 ~yg--------~~~g~~vl~~~~~~l~ 101 (106)
T 1e2b_A 83 LYG--------KVDGLGVLKAAVAAIK 101 (106)
T ss_dssp HHT--------TTCTTHHHHHHHHHHH
T ss_pred Hcc--------CCCHHHHHHHHHHHHH
Confidence 221 1345566666666665
No 113
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=22.62 E-value=3.5e+02 Score=23.85 Aligned_cols=18 Identities=11% Similarity=0.146 Sum_probs=13.6
Q ss_pred ccCCCHHHHHHHHHHHHh
Q 003992 649 LTYKTSEDFVARVKEALA 666 (781)
Q Consensus 649 v~~~D~eeLa~aI~~LL~ 666 (781)
..+-+.+++.++|..++.
T Consensus 139 ~KP~~~~~l~~~i~~~l~ 156 (157)
T 3hzh_A 139 VKPLDRAKVLQRVMSVFV 156 (157)
T ss_dssp ESSCCHHHHHHHHHHTTC
T ss_pred eCCCCHHHHHHHHHHHhc
Confidence 344788999999988764
No 114
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=22.30 E-value=2.6e+02 Score=28.75 Aligned_cols=68 Identities=15% Similarity=0.176 Sum_probs=46.4
Q ss_pred CCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHh--cccEEEEccCCCCChHHHHHHHHhCCcEEEe
Q 003992 562 DGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLH--GYKVFINPSISDVLCTATAEALAMGKFVICA 634 (781)
Q Consensus 562 p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~--~ADVfVlPS~~EgfGlviLEAMA~G~PVVaS 634 (781)
++++++.+-+ ...+..++.+++.+.. ...++.++++. .+|+++..+......-.+.+|+..|++|++-
T Consensus 23 ~~~~~vav~d-~~~~~~~~~~~~~g~~----~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~v~~e 92 (332)
T 2glx_A 23 TGGEVVSMMS-TSAERGAAYATENGIG----KSVTSVEELVGDPDVDAVYVSTTNELHREQTLAAIRAGKHVLCE 92 (332)
T ss_dssp TTCEEEEEEC-SCHHHHHHHHHHTTCS----CCBSCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEC
T ss_pred CCCeEEEEEC-CCHHHHHHHHHHcCCC----cccCCHHHHhcCCCCCEEEEeCChhHhHHHHHHHHHCCCeEEEe
Confidence 4677664433 4555666777766642 12345566776 4899998887666667788999999999983
No 115
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=22.28 E-value=64 Score=33.56 Aligned_cols=66 Identities=12% Similarity=0.114 Sum_probs=40.9
Q ss_pred cccCCccccCCCCCCCCCCCEEEEEeCccCCCcCcccccHHHH-HHHHHHcCCCEEEEEeccCCCCCCcccc
Q 003992 291 HYEGGFWTDFGKDDLSDKKRNVAIVTTASLPWMTGTAVNPLFR-AAYLAKTEQQNVTLLVPWLCKSDQELVY 361 (781)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~rIaI~TtaflP~~~G~av~~l~r-A~~Lak~G~~~VtlVvP~l~~~dq~~v~ 361 (781)
++++|-.. -+.+-+-++..|-|+.+.+.| +..- ..+.. +..+-+.+..+||+|+|++..+.|.+.+
T Consensus 31 ~F~dGE~~--v~i~~~vrg~dv~iiqs~~~p--n~~l-mell~~~~a~~~~~a~~i~~v~Py~~yaRqdr~~ 97 (284)
T 1u9y_A 31 RFPDNEIY--VRIVDEINDDEAVIINTQKNQ--NDAI-VETILLCDALRDEGVKKITLVAPYLAYARQDKKF 97 (284)
T ss_dssp ECTTCCEE--EEECSCCCSSEEEEECCCSSH--HHHH-HHHHHHHHHHHTTTCCEEEEECSSCTTCSCSSCS
T ss_pred ECCCCCEE--EEeCCCCCCCEEEEEeCCCCC--cHHH-HHHHHHHHHHHHcCCceEEEEecccccceeeccc
Confidence 56666542 122224457899999887765 3332 23333 4455555667999999999887776543
No 116
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=22.04 E-value=1.5e+02 Score=30.58 Aligned_cols=68 Identities=9% Similarity=-0.007 Sum_probs=44.3
Q ss_pred CCCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHhcccEEEEccCCCCChHHHHHHHHhCCcEEEe
Q 003992 561 LDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVICA 634 (781)
Q Consensus 561 ~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaS 634 (781)
.++++++.+-+- ..+..++.+++.+.. ..++.+++-..+|+++..+......-.+.+|+..|++|++-
T Consensus 28 ~~~~~lvav~d~-~~~~~~~~~~~~g~~-----~~~~~~~l~~~~D~V~i~tp~~~h~~~~~~al~~G~~v~~e 95 (319)
T 1tlt_A 28 ASDWTLQGAWSP-TRAKALPICESWRIP-----YADSLSSLAASCDAVFVHSSTASHFDVVSTLLNAGVHVCVD 95 (319)
T ss_dssp CSSEEEEEEECS-SCTTHHHHHHHHTCC-----BCSSHHHHHTTCSEEEECSCTTHHHHHHHHHHHTTCEEEEE
T ss_pred CCCeEEEEEECC-CHHHHHHHHHHcCCC-----ccCcHHHhhcCCCEEEEeCCchhHHHHHHHHHHcCCeEEEe
Confidence 367887744332 223344555655643 23444545467899998887766666788999999999985
No 117
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=21.99 E-value=89 Score=29.70 Aligned_cols=67 Identities=15% Similarity=0.227 Sum_probs=38.9
Q ss_pred HHHhcccEEEEccCC--CCChHHHHHHHHhCCcEEEeCCCC---c-c-eeecCCc-----cccCCCHHHHHHHHHHHHhC
Q 003992 600 DSLHGYKVFINPSIS--DVLCTATAEALAMGKFVICADHPS---N-E-FFRSFPN-----CLTYKTSEDFVARVKEALAN 667 (781)
Q Consensus 600 ~ly~~ADVfVlPS~~--EgfGlviLEAMA~G~PVVaSd~gg---~-g-~L~~~~n-----gv~~~D~eeLa~aI~~LL~d 667 (781)
+.++.||++|.--.. .|-+.=+-=|.|.|+|||+--.+. . . .+.+.++ ...|.+ +++.+.|.+.+++
T Consensus 64 ~~i~~aD~vvA~l~~~d~Gt~~EiG~A~algkPV~~l~~~~~~~~ls~mi~G~~~~~~~~~~~Y~~-~el~~il~~f~~~ 142 (152)
T 4fyk_A 64 NWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAE-GEVETMLDRYFEA 142 (152)
T ss_dssp HHHHHCSEEEEECSSCCHHHHHHHHHHHHTTCCEEEEECGGGSCCCCHHHHHHCCSSSEEEEECCT-TCHHHHHHHHHC-
T ss_pred HHHHHCCEEEEeCCCCCCCHHHHHHHHHHcCCeEEEEEeCCccchhHHHHcCCCCCCeEEEEEecH-HHHHHHHHHHHHh
Confidence 789999988764332 223333555889999999932221 1 1 1112121 144566 7888888887754
No 118
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=21.83 E-value=2.3e+02 Score=30.35 Aligned_cols=70 Identities=14% Similarity=0.107 Sum_probs=48.7
Q ss_pred CCcEEEEEeCCCCHHHHHHHHHhcCCc-EEEcCCCCCHHHHHhc-------ccEEEEccCCCCChHHHHHHHHhCCcEEE
Q 003992 562 DGFKLDVFGNGEDAYEVQSAAKRLDLN-LNFQKGRDHADDSLHG-------YKVFINPSISDVLCTATAEALAMGKFVIC 633 (781)
Q Consensus 562 p~i~LvIVG~Gp~~~~L~~~a~~lgL~-V~FlG~v~~~e~ly~~-------ADVfVlPS~~EgfGlviLEAMA~G~PVVa 633 (781)
++++++.+-.....+..++.++++++. .. ...+.++++.. .|+++..+-...-.-.+.+|+..|++|+|
T Consensus 38 ~~~~lva~v~d~~~~~a~~~a~~~g~~~~~---~~~~~~~ll~~~~~~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~ 114 (398)
T 3dty_A 38 NTFVLVAGAFDIDPIRGSAFGEQLGVDSER---CYADYLSMFEQEARRADGIQAVSIATPNGTHYSITKAALEAGLHVVC 114 (398)
T ss_dssp GSEEEEEEECCSSHHHHHHHHHHTTCCGGG---BCSSHHHHHHHHTTCTTCCSEEEEESCGGGHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEEEEeCCCHHHHHHHHHHhCCCcce---eeCCHHHHHhcccccCCCCCEEEECCCcHHHHHHHHHHHHCCCeEEE
Confidence 456665311245667778888887753 11 12456677775 89888888777667778999999999998
Q ss_pred e
Q 003992 634 A 634 (781)
Q Consensus 634 S 634 (781)
=
T Consensus 115 E 115 (398)
T 3dty_A 115 E 115 (398)
T ss_dssp C
T ss_pred e
Confidence 3
No 119
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=21.38 E-value=4e+02 Score=23.25 Aligned_cols=98 Identities=10% Similarity=0.014 Sum_probs=53.5
Q ss_pred cEEEEEeCCCCH-HHHHHHHHhcCCcEEEcCCCCCHHHHHh--cccEEEEccC-CCCChHHHHHHHH---hCCcEEEeCC
Q 003992 564 FKLDVFGNGEDA-YEVQSAAKRLDLNLNFQKGRDHADDSLH--GYKVFINPSI-SDVLCTATAEALA---MGKFVICADH 636 (781)
Q Consensus 564 i~LvIVG~Gp~~-~~L~~~a~~lgL~V~FlG~v~~~e~ly~--~ADVfVlPS~-~EgfGlviLEAMA---~G~PVVaSd~ 636 (781)
.+++|+.+.+.. ..+.......|..|.........-..+. ..|++++-.. .+.-|+.+++.+. ..+|||....
T Consensus 4 ~~ILivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~ 83 (155)
T 1qkk_A 4 PSVFLIDDDRDLRKAMQQTLELAGFTVSSFASATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTG 83 (155)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEESCHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEEC
T ss_pred CEEEEEeCCHHHHHHHHHHHHHcCcEEEEECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEEC
Confidence 456777654433 5566666666666544322111112221 3566665433 3344666666664 3677776522
Q ss_pred C-------------CcceeecCCccccCCCHHHHHHHHHHHHhC
Q 003992 637 P-------------SNEFFRSFPNCLTYKTSEDFVARVKEALAN 667 (781)
Q Consensus 637 g-------------g~g~L~~~~ngv~~~D~eeLa~aI~~LL~d 667 (781)
. ..+++ ..+-+.+++..+|..++..
T Consensus 84 ~~~~~~~~~~~~~g~~~~l------~kP~~~~~L~~~i~~~~~~ 121 (155)
T 1qkk_A 84 HGDIPMAVQAIQDGAYDFI------AKPFAADRLVQSARRAEEK 121 (155)
T ss_dssp GGGHHHHHHHHHTTCCEEE------ESSCCHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHhcCCCeEE------eCCCCHHHHHHHHHHHHHH
Confidence 1 12333 3347899999999998764
No 120
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=21.31 E-value=3.2e+02 Score=28.73 Aligned_cols=123 Identities=11% Similarity=0.103 Sum_probs=69.8
Q ss_pred HHHHhcCCEEEEcCh---hhhhcCC-CcEEeeCCCCCCCCCCCc----chhhHhhhCcCCCCcEEEEEeeccCccCHHHH
Q 003992 479 WVTRAYCDKVLRLSA---ATQDLPK-SVICNVHGVNPKFLQIGE----KVATDREQGQQAFSKGAYFLGKMVWAKGYREL 550 (781)
Q Consensus 479 ~l~r~~aD~VI~vS~---~~k~l~~-kivvi~nGVD~~~f~p~~----~~~~r~~~Gi~~~~~~ILfVGRL~~~KGid~L 550 (781)
.+.+ |+|.|+.=.. ....+.+ ..+-++||-+ ...+|.. -...++.+|.- ....|.|+|-. ...=..-+
T Consensus 90 vls~-~~D~iviR~~~~~~~~~lA~~~~vPVINa~~-~~~HPtQaLaDl~Ti~e~~g~l-~gl~va~vGD~-~~rva~Sl 165 (307)
T 2i6u_A 90 VLSR-YVDAIVWRTFGQERLDAMASVATVPVINALS-DEFHPCQVLADLQTIAERKGAL-RGLRLSYFGDG-ANNMAHSL 165 (307)
T ss_dssp HHHH-HEEEEEEECSSHHHHHHHHHHCSSCEEESCC-SSCCHHHHHHHHHHHHHHHSCC-TTCEEEEESCT-TSHHHHHH
T ss_pred HHHH-hCCEEEEecCChhHHHHHHhhCCCCEEcCCC-CCcCccHHHHHHHHHHHHhCCc-CCeEEEEECCC-CcCcHHHH
Confidence 3444 5788776654 2222322 1244567765 4445532 22345555522 34678899986 22223445
Q ss_pred HHHHHHhhccCCCcEEEEEeCCCCH--HHH----HHHHHhcCCcEEEcCCCCCHHHHHhcccEEEEccC
Q 003992 551 IDLLAKHKNDLDGFKLDVFGNGEDA--YEV----QSAAKRLDLNLNFQKGRDHADDSLHGYKVFINPSI 613 (781)
Q Consensus 551 LeA~~~L~~~~p~i~LvIVG~Gp~~--~~L----~~~a~~lgL~V~FlG~v~~~e~ly~~ADVfVlPS~ 613 (781)
+.++.++ ++++.++|.-... +.+ ++.+++.|..+.+. ++.++.+..+||+....+
T Consensus 166 ~~~~~~~-----g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~---~d~~eav~~aDvvy~~~w 226 (307)
T 2i6u_A 166 LLGGVTA-----GIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVT---ADAHAAAAGADVLVTDTW 226 (307)
T ss_dssp HHHHHHT-----TCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEE---SCHHHHHTTCSEEEECCS
T ss_pred HHHHHHC-----CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEE---ECHHHHhcCCCEEEecce
Confidence 6665554 6789999853221 223 34455667555553 566678999999988654
No 121
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=21.27 E-value=2.6e+02 Score=27.57 Aligned_cols=33 Identities=9% Similarity=-0.030 Sum_probs=19.4
Q ss_pred cccEEE-EccCCCCChHHHHHHHHhCCcEEEeCCC
Q 003992 604 GYKVFI-NPSISDVLCTATAEALAMGKFVICADHP 637 (781)
Q Consensus 604 ~ADVfV-lPS~~EgfGlviLEAMA~G~PVVaSd~g 637 (781)
..|.+| .|...+.+.-.+-++. .|+|||+.+..
T Consensus 63 ~vdgiii~~~~~~~~~~~~~~~~-~~iPvV~~~~~ 96 (304)
T 3o1i_D 63 GANAIILGTVDPHAYEHNLKSWV-GNTPVFATVNQ 96 (304)
T ss_dssp TCSEEEECCSSTTSSTTTHHHHT-TTSCEEECSSC
T ss_pred CCCEEEEeCCChhHHHHHHHHHc-CCCCEEEecCC
Confidence 456444 4444443333455566 99999998543
No 122
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=21.27 E-value=1.2e+02 Score=32.13 Aligned_cols=81 Identities=12% Similarity=0.063 Sum_probs=48.2
Q ss_pred HHHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHHhcCCcEE--EcC-----------CCCCHHHHHhcccEEEEccCCC
Q 003992 549 ELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLN--FQK-----------GRDHADDSLHGYKVFINPSISD 615 (781)
Q Consensus 549 ~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~--FlG-----------~v~~~e~ly~~ADVfVlPS~~E 615 (781)
.+++++.. .|+++++.+.+-. .+....+++..|..+. |.+ ...+.++++..+|+.+..+-..
T Consensus 16 ~~~r~l~~----~~~~elvav~d~~-~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vDvV~~aTp~~ 90 (334)
T 2czc_A 16 RVAYAVTK----QDDMELIGITKTK-PDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDIIVDATPGG 90 (334)
T ss_dssp HHHHHHHT----CTTEEEEEEEESS-CSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSEEEECCSTT
T ss_pred HHHHHHhc----CCCCEEEEEEcCC-HHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCCCEEEECCCcc
Confidence 35555543 4788887777542 3344455665554321 111 1124556778899888877544
Q ss_pred CChHHHHHHHHhCCcEEEe
Q 003992 616 VLCTATAEALAMGKFVICA 634 (781)
Q Consensus 616 gfGlviLEAMA~G~PVVaS 634 (781)
.---....++..|++||++
T Consensus 91 ~h~~~a~~~l~aGk~Vi~s 109 (334)
T 2czc_A 91 IGAKNKPLYEKAGVKAIFQ 109 (334)
T ss_dssp HHHHHHHHHHHHTCEEEEC
T ss_pred ccHHHHHHHHHcCCceEee
Confidence 3222345788999999976
No 123
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=21.24 E-value=2.8e+02 Score=28.69 Aligned_cols=68 Identities=16% Similarity=0.184 Sum_probs=48.4
Q ss_pred CcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHHh--cccEEEEccCCCCChHHHHHHHHhCCcEEEeC
Q 003992 563 GFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSLH--GYKVFINPSISDVLCTATAEALAMGKFVICAD 635 (781)
Q Consensus 563 ~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly~--~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd 635 (781)
+++++-+.+ ...+..++.+++.++.-.| .+.++++. ..|+++.++....-.-.+.+|+..|++|++-.
T Consensus 28 ~~~l~av~d-~~~~~a~~~a~~~~~~~~~----~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~~GkhVl~EK 97 (334)
T 3ohs_X 28 EHQVVAVAA-RDLSRAKEFAQKHDIPKAY----GSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKAVLCEK 97 (334)
T ss_dssp TEEEEEEEC-SSHHHHHHHHHHHTCSCEE----SSHHHHHHCTTCCEEEECCCGGGHHHHHHHHHHTTCEEEEES
T ss_pred CeEEEEEEc-CCHHHHHHHHHHcCCCccc----CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEC
Confidence 456665554 4566777778877754222 45566787 58999888876666677889999999999853
No 124
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=21.20 E-value=1.3e+02 Score=29.76 Aligned_cols=39 Identities=15% Similarity=0.158 Sum_probs=29.1
Q ss_pred CHHHHH-hcccEEEEccCCCCChHHHHHHHHhCCcEEEeC
Q 003992 597 HADDSL-HGYKVFINPSISDVLCTATAEALAMGKFVICAD 635 (781)
Q Consensus 597 ~~e~ly-~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd 635 (781)
+.++++ ..+|+.+..+..+..--.+.+++..|++||+..
T Consensus 42 ~~~~l~~~~~DvVv~~~~~~~~~~~~~~~l~~G~~vv~~~ 81 (236)
T 2dc1_A 42 GIDEFLQREMDVAVEAASQQAVKDYAEKILKAGIDLIVLS 81 (236)
T ss_dssp SHHHHTTSCCSEEEECSCHHHHHHHHHHHHHTTCEEEESC
T ss_pred CHHHHhcCCCCEEEECCCHHHHHHHHHHHHHCCCcEEEEC
Confidence 455667 589988888765544455678999999999864
No 125
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=21.17 E-value=1.1e+02 Score=31.89 Aligned_cols=42 Identities=10% Similarity=0.020 Sum_probs=31.2
Q ss_pred CCHHHHHhcccEEEEccCCCCChHHHHHHHHhCCcEEEeCCC
Q 003992 596 DHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHP 637 (781)
Q Consensus 596 ~~~e~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~g 637 (781)
++.++++..+||.|-.|..+..--.+..++..|+|||....|
T Consensus 80 ~dl~~ll~~aDVvIDFT~p~a~~~~~~~~l~~Gv~vViGTTG 121 (288)
T 3ijp_A 80 DDPESAFSNTEGILDFSQPQASVLYANYAAQKSLIHIIGTTG 121 (288)
T ss_dssp SCHHHHTTSCSEEEECSCHHHHHHHHHHHHHHTCEEEECCCC
T ss_pred CCHHHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 356678889999997776554444466789999999987655
No 126
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=21.15 E-value=70 Score=33.48 Aligned_cols=30 Identities=27% Similarity=0.297 Sum_probs=24.1
Q ss_pred CCEEEEEeCccCCCcCcccccHHHHHHHHHHcCCCEEEEE
Q 003992 309 KRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLL 348 (781)
Q Consensus 309 ~~rIaI~TtaflP~~~G~av~~l~rA~~Lak~G~~~VtlV 348 (781)
.|||+|| |....-+..|..|++.|+ +|+|+
T Consensus 1 sm~V~IV---------GaGpaGl~~A~~L~~~G~-~v~v~ 30 (412)
T 4hb9_A 1 SMHVGII---------GAGIGGTCLAHGLRKHGI-KVTIY 30 (412)
T ss_dssp CCEEEEE---------CCSHHHHHHHHHHHHTTC-EEEEE
T ss_pred CCEEEEE---------CcCHHHHHHHHHHHhCCC-CEEEE
Confidence 3899999 444556778889999996 99988
No 127
>2m1z_A LMO0427 protein; homolog PTS system IIB component, transferase; NMR {Listeria monocytogenes egd-e}
Probab=21.15 E-value=2.5e+02 Score=24.95 Aligned_cols=76 Identities=16% Similarity=0.123 Sum_probs=50.8
Q ss_pred HHHHHHHHhcCCc--EEEcCCCC----CHHHHHhcccEEEEccCCCCChHHHHHHHHhCCcEEEeCCCCcceeecCCccc
Q 003992 576 YEVQSAAKRLDLN--LNFQKGRD----HADDSLHGYKVFINPSISDVLCTATAEALAMGKFVICADHPSNEFFRSFPNCL 649 (781)
Q Consensus 576 ~~L~~~a~~lgL~--V~FlG~v~----~~e~ly~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~g~L~~~~ngv 649 (781)
+.|++.++++|.+ |.-.|..- ..++.+..||++|+.+..+.-. .| --.|+||+-+.... + +
T Consensus 23 eaLekaA~~~G~~ikVEtqgs~g~~n~Lt~~~I~~AD~VIia~d~~v~~---~~-RF~gk~v~~~~v~~-~-i------- 89 (106)
T 2m1z_A 23 QALKKGAKKMGNLIKVETQGATGIENELTEKDVNIGEVVIFAVDTKVRN---KE-RFDGKVVLEVPVSA-P-I------- 89 (106)
T ss_dssp HHHHHHHHHHTCEEEEEEEETTEESSCCCHHHHHHCSEEEEEESSCCST---HH-HHTTSEEEEECTTH-H-H-------
T ss_pred HHHHHHHHHCCCEEEEEEecCccccCCCCHHHHhhCCEEEEeccccccc---hh-ccCCCcEEEEcHHH-H-H-------
Confidence 7788899999988 55555422 2236789999999988754422 22 23499999875543 1 1
Q ss_pred cCCCHHHHHHHHHHHHh
Q 003992 650 TYKTSEDFVARVKEALA 666 (781)
Q Consensus 650 ~~~D~eeLa~aI~~LL~ 666 (781)
.|++++.+.+..++.
T Consensus 90 --~~~~~~l~~a~~~~~ 104 (106)
T 2m1z_A 90 --KDAEKVINAALALID 104 (106)
T ss_dssp --HCHHHHHHHHHHHHT
T ss_pred --HCHHHHHHHHHHHHh
Confidence 567787777776664
No 128
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=21.06 E-value=3.9e+02 Score=22.75 Aligned_cols=104 Identities=9% Similarity=0.036 Sum_probs=57.0
Q ss_pred CcEEEEEeCCCCH-HHHHHHHHhcCCcEEEcCCCCCHHHHHhc--ccEEEEccC-CCCChHHHHHHHHh-----CCcEEE
Q 003992 563 GFKLDVFGNGEDA-YEVQSAAKRLDLNLNFQKGRDHADDSLHG--YKVFINPSI-SDVLCTATAEALAM-----GKFVIC 633 (781)
Q Consensus 563 ~i~LvIVG~Gp~~-~~L~~~a~~lgL~V~FlG~v~~~e~ly~~--ADVfVlPS~-~EgfGlviLEAMA~-----G~PVVa 633 (781)
..+++|+.+.+.. ..+.......|..|.........-..+.. .|++++-.. .+.-|+.+++.+.. .+|||.
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ 86 (142)
T 3cg4_A 7 KGDVMIVDDDAHVRIAVKTILSDAGFHIISADSGGQCIDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIVM 86 (142)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHCCeEEEEeCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCEEE
Confidence 4677788755433 55666666667665543332222233433 566665433 34457788888765 467775
Q ss_pred e-CCCCccee----ecCCcc--ccCCCHHHHHHHHHHHHh
Q 003992 634 A-DHPSNEFF----RSFPNC--LTYKTSEDFVARVKEALA 666 (781)
Q Consensus 634 S-d~gg~g~L----~~~~ng--v~~~D~eeLa~aI~~LL~ 666 (781)
. ........ ..+..+ ..+-+.+++..+|..++.
T Consensus 87 ~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~ 126 (142)
T 3cg4_A 87 LTAKNAPDAKMIGLQEYVVDYITKPFDNEDLIEKTTFFMG 126 (142)
T ss_dssp EECTTCCCCSSTTGGGGEEEEEESSCCHHHHHHHHHHHHH
T ss_pred EECCCCHHHHHHHHhcCccEEEeCCCCHHHHHHHHHHHHH
Confidence 4 22211111 111111 223688999999988774
No 129
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=21.03 E-value=2.5e+02 Score=30.27 Aligned_cols=70 Identities=17% Similarity=0.178 Sum_probs=49.7
Q ss_pred CCcEEEE-EeCCCCHHHHHHHHHhcCCc-EEEcCCCCCHHHHHhc-------ccEEEEccCCCCChHHHHHHHHhCCcEE
Q 003992 562 DGFKLDV-FGNGEDAYEVQSAAKRLDLN-LNFQKGRDHADDSLHG-------YKVFINPSISDVLCTATAEALAMGKFVI 632 (781)
Q Consensus 562 p~i~LvI-VG~Gp~~~~L~~~a~~lgL~-V~FlG~v~~~e~ly~~-------ADVfVlPS~~EgfGlviLEAMA~G~PVV 632 (781)
++++++. +- ....+..++.++++++. .. ...+.++++.. .|+++..+-...-.-.+.+|+..|++|+
T Consensus 63 ~~~~lva~v~-d~~~~~a~~~a~~~g~~~~~---~~~~~~~ll~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl 138 (417)
T 3v5n_A 63 DHYELVAGAL-SSTPEKAEASGRELGLDPSR---VYSDFKEMAIREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRGIHVI 138 (417)
T ss_dssp SCEEEEEEEC-CSSHHHHHHHHHHHTCCGGG---BCSCHHHHHHHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTTCEEE
T ss_pred CCcEEEEEEe-CCCHHHHHHHHHHcCCCccc---ccCCHHHHHhcccccCCCCcEEEECCCcHHHHHHHHHHHhCCCeEE
Confidence 5677663 32 35567777788877753 11 22456677776 8999988887777778899999999999
Q ss_pred EeC
Q 003992 633 CAD 635 (781)
Q Consensus 633 aSd 635 (781)
|=.
T Consensus 139 ~EK 141 (417)
T 3v5n_A 139 CDK 141 (417)
T ss_dssp EES
T ss_pred EEC
Confidence 853
No 130
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=20.92 E-value=3.4e+02 Score=26.25 Aligned_cols=61 Identities=11% Similarity=-0.042 Sum_probs=32.8
Q ss_pred cccEEEEccCCCCChHHHHHHHHhCCcEEEeCCCCcceeecCCccccCCCHHHHHHHHHHHHhC
Q 003992 604 GYKVFINPSISDVLCTATAEALAMGKFVICADHPSNEFFRSFPNCLTYKTSEDFVARVKEALAN 667 (781)
Q Consensus 604 ~ADVfVlPS~~EgfGlviLEAMA~G~PVVaSd~gg~g~L~~~~ngv~~~D~eeLa~aI~~LL~d 667 (781)
..|.+|+.+....-.-.+-++...|+|||..+....+. .-.++..++.+....+...|++.
T Consensus 58 ~vdgiIi~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~---~~~~V~~d~~~~~~~a~~~L~~~ 118 (272)
T 3o74_A 58 RCDALFVASCLPPEDDSYRELQDKGLPVIAIDRRLDPA---HFCSVISDDRDASRQLAASLLSS 118 (272)
T ss_dssp TCSEEEECCCCCSSCCHHHHHHHTTCCEEEESSCCCTT---TCEEEEECHHHHHHHHHHHHHTT
T ss_pred CCCEEEEecCccccHHHHHHHHHcCCCEEEEccCCCcc---ccCEEEEchHHHHHHHHHHHHHC
Confidence 45655444332111233456667899999987643211 01124446666666666666654
No 131
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=20.75 E-value=3.9e+02 Score=24.74 Aligned_cols=71 Identities=18% Similarity=0.110 Sum_probs=43.0
Q ss_pred EEEEEeCCCCH---HHHHHHHHhcCCcEEEcCCCCCHH----HHHhcccEEEEccCCCCChH---HHHHHHHhCCcEEEe
Q 003992 565 KLDVFGNGEDA---YEVQSAAKRLDLNLNFQKGRDHAD----DSLHGYKVFINPSISDVLCT---ATAEALAMGKFVICA 634 (781)
Q Consensus 565 ~LvIVG~Gp~~---~~L~~~a~~lgL~V~FlG~v~~~e----~ly~~ADVfVlPS~~EgfGl---viLEAMA~G~PVVaS 634 (781)
+++++|.|... ..+.......|..+.+.....+.. ..+..-|++|.-|.+-.-.- .+-.|-..|.+||+-
T Consensus 41 ~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~i~iS~sG~t~~~~~~~~~ak~~g~~vi~I 120 (187)
T 3sho_A 41 HVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLMIGVSVWRYLRDTVAALAGAAERGVPTMAL 120 (187)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHTTCCEEEECCCTHHHHHHHHTCCTTEEEEEECCSSCCHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEEecCchHHHHHHHHHHHHhcCCCEEEecCCchhHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEE
Confidence 78999988765 444555556777777665222221 23345678888886532221 233455679999876
Q ss_pred C
Q 003992 635 D 635 (781)
Q Consensus 635 d 635 (781)
.
T Consensus 121 T 121 (187)
T 3sho_A 121 T 121 (187)
T ss_dssp E
T ss_pred e
Confidence 3
No 132
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=20.58 E-value=2.8e+02 Score=30.21 Aligned_cols=94 Identities=18% Similarity=0.216 Sum_probs=57.4
Q ss_pred cEEEEEeeccCccCHHHHHHHHHHhhccCCCcEEEEEeCCCCHHHHHHHHH---hcCCc--EEEcCCCCCHHHHHh--cc
Q 003992 533 KGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAK---RLDLN--LNFQKGRDHADDSLH--GY 605 (781)
Q Consensus 533 ~~ILfVGRL~~~KGid~LLeA~~~L~~~~p~i~LvIVG~Gp~~~~L~~~a~---~lgL~--V~FlG~v~~~e~ly~--~A 605 (781)
..|..||--...+ ..+.++.. .++++++-+-+ ...+..++.++ +.++. -.|.+..++.++++. ..
T Consensus 21 ~rvgiIG~G~~g~---~h~~~l~~----~~~~~lvav~d-~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~v 92 (444)
T 2ixa_A 21 VRIAFIAVGLRGQ---THVENMAR----RDDVEIVAFAD-PDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNI 92 (444)
T ss_dssp EEEEEECCSHHHH---HHHHHHHT----CTTEEEEEEEC-SCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTC
T ss_pred ceEEEEecCHHHH---HHHHHHHh----CCCcEEEEEEe-CCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCC
Confidence 4566776321111 13444432 37788876554 34444555443 44543 334433446667887 47
Q ss_pred cEEEEccCCCCChHHHHHHHHhCCcEEEe
Q 003992 606 KVFINPSISDVLCTATAEALAMGKFVICA 634 (781)
Q Consensus 606 DVfVlPS~~EgfGlviLEAMA~G~PVVaS 634 (781)
|+++..+....-.-.+++||..|++|+|-
T Consensus 93 D~V~i~tp~~~h~~~~~~al~aGkhV~~E 121 (444)
T 2ixa_A 93 DAVFVSSPWEWHHEHGVAAMKAGKIVGME 121 (444)
T ss_dssp CEEEECCCGGGHHHHHHHHHHTTCEEEEC
T ss_pred CEEEEcCCcHHHHHHHHHHHHCCCeEEEe
Confidence 88888887666667788999999999985
No 133
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=20.58 E-value=4e+02 Score=22.68 Aligned_cols=106 Identities=8% Similarity=-0.012 Sum_probs=58.2
Q ss_pred CcEEEEEeCCCCH-HHHHHHHHhcCCcEEEcCCCCCHHHHHh--cccEEEEccC-CCCChHHHHHHHHh-----CCcEEE
Q 003992 563 GFKLDVFGNGEDA-YEVQSAAKRLDLNLNFQKGRDHADDSLH--GYKVFINPSI-SDVLCTATAEALAM-----GKFVIC 633 (781)
Q Consensus 563 ~i~LvIVG~Gp~~-~~L~~~a~~lgL~V~FlG~v~~~e~ly~--~ADVfVlPS~-~EgfGlviLEAMA~-----G~PVVa 633 (781)
..+++|+.+.+.. ..++....+.|..|.........-..+. ..|++++-.. .+.-|+.+++.+.. .+|||.
T Consensus 6 ~~~iLivdd~~~~~~~l~~~l~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~ 85 (140)
T 3grc_A 6 RPRILICEDDPDIARLLNLMLEKGGFDSDMVHSAAQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVV 85 (140)
T ss_dssp CSEEEEECSCHHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEE
T ss_pred CCCEEEEcCCHHHHHHHHHHHHHCCCeEEEECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEE
Confidence 3567777654433 5566666666666544332222223332 3577766443 34457778887765 678876
Q ss_pred eCCCCc-ce-----eecCCcc--ccCCCHHHHHHHHHHHHhCC
Q 003992 634 ADHPSN-EF-----FRSFPNC--LTYKTSEDFVARVKEALAND 668 (781)
Q Consensus 634 Sd~gg~-g~-----L~~~~ng--v~~~D~eeLa~aI~~LL~d~ 668 (781)
...... .. +..+..+ ..+-+.+++..+|..++...
T Consensus 86 ~s~~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~l~~~ 128 (140)
T 3grc_A 86 VSANAREGELEFNSQPLAVSTWLEKPIDENLLILSLHRAIDNM 128 (140)
T ss_dssp ECTTHHHHHHHHCCTTTCCCEEECSSCCHHHHHHHHHHHHHHH
T ss_pred EecCCChHHHHHHhhhcCCCEEEeCCCCHHHHHHHHHHHHHhc
Confidence 533211 11 0111122 23378999999999988643
No 134
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=20.47 E-value=3.9e+02 Score=22.61 Aligned_cols=107 Identities=8% Similarity=0.027 Sum_probs=58.3
Q ss_pred CcEEEEEeCCCCH-HHHHHHHHh-cCCc-EEEcCCCCCHHHHHh--cccEEEEccC-CCCChHHHHHHHHh-----CCcE
Q 003992 563 GFKLDVFGNGEDA-YEVQSAAKR-LDLN-LNFQKGRDHADDSLH--GYKVFINPSI-SDVLCTATAEALAM-----GKFV 631 (781)
Q Consensus 563 ~i~LvIVG~Gp~~-~~L~~~a~~-lgL~-V~FlG~v~~~e~ly~--~ADVfVlPS~-~EgfGlviLEAMA~-----G~PV 631 (781)
..+++|+.+.+.. ..+...... .+.. |.......+.-..+. ..|++++-.. .+.-|+.+++.+.. .+||
T Consensus 8 ~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~i 87 (143)
T 3cnb_A 8 DFSILIIEDDKEFADMLTQFLENLFPYAKIKIAYNPFDAGDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIV 87 (143)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHHCTTCEEEEECSHHHHHHHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEE
T ss_pred CceEEEEECCHHHHHHHHHHHHhccCccEEEEECCHHHHHHHHHhcCCCEEEEecccCCCcHHHHHHHHHhCccccCCcE
Confidence 4567777755443 556666666 6766 554443322223333 3576665543 34456777777764 5677
Q ss_pred EEe-CCCCcce----eecCCcc--ccCCCHHHHHHHHHHHHhCCC
Q 003992 632 ICA-DHPSNEF----FRSFPNC--LTYKTSEDFVARVKEALANDP 669 (781)
Q Consensus 632 VaS-d~gg~g~----L~~~~ng--v~~~D~eeLa~aI~~LL~d~~ 669 (781)
|.. ....... +..+..+ ..+-+.+++..+|..++....
T Consensus 88 i~~s~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~~~~ 132 (143)
T 3cnb_A 88 IAMTGALTDDNVSRIVALGAETCFGKPLNFTLLEKTIKQLVEQKK 132 (143)
T ss_dssp EEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHTTC
T ss_pred EEEeCCCCHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHHHHHhhc
Confidence 654 3322110 0011111 334789999999999887543
No 135
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=20.30 E-value=5.8e+02 Score=24.48 Aligned_cols=61 Identities=13% Similarity=-0.014 Sum_probs=33.5
Q ss_pred ccEEEEccC-CCCChHHHHHHHHhCCcEEEeCCCCcceeecCCccccCCCHHHHHHHHHHHHhC
Q 003992 605 YKVFINPSI-SDVLCTATAEALAMGKFVICADHPSNEFFRSFPNCLTYKTSEDFVARVKEALAN 667 (781)
Q Consensus 605 ADVfVlPS~-~EgfGlviLEAMA~G~PVVaSd~gg~g~L~~~~ngv~~~D~eeLa~aI~~LL~d 667 (781)
.|.+|+... .+...-.+-++...|+|||..+....+.- ....+..++.+....+...+++.
T Consensus 60 vdgii~~~~~~~~~~~~~~~~~~~~ipvV~~~~~~~~~~--~~~~V~~d~~~~g~~~~~~l~~~ 121 (276)
T 3ksm_A 60 PDALILAPNSAEDLTPSVAQYRARNIPVLVVDSDLAGDA--HQGLVATDNYAAGQLAARALLAT 121 (276)
T ss_dssp CSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCCSSSC--SSEEEECCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCHHHHHHHHHHHHHCCCcEEEEecCCCCCC--cceEEccCHHHHHHHHHHHHHHh
Confidence 676665443 34444455566788999999876432110 00113345555555555566554
No 136
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=20.22 E-value=1.5e+02 Score=30.58 Aligned_cols=67 Identities=19% Similarity=0.186 Sum_probs=45.3
Q ss_pred CCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcCCCCCHHHHH-hcccEEEEccCCCCChHHHHHHHHhCCcEEEe
Q 003992 562 DGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDSL-HGYKVFINPSISDVLCTATAEALAMGKFVICA 634 (781)
Q Consensus 562 p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG~v~~~e~ly-~~ADVfVlPS~~EgfGlviLEAMA~G~PVVaS 634 (781)
++++++ +-+ ...+..++.+++.+....+. +..+ .+ ..+|+++..+......-.+.+|+..|++|++-
T Consensus 26 ~~~~l~-v~d-~~~~~~~~~a~~~g~~~~~~---~~~~-~l~~~~D~V~i~tp~~~h~~~~~~al~~Gk~V~~E 93 (323)
T 1xea_A 26 PDIELV-LCT-RNPKVLGTLATRYRVSATCT---DYRD-VLQYGVDAVMIHAATDVHSTLAAFFLHLGIPTFVD 93 (323)
T ss_dssp TTEEEE-EEC-SCHHHHHHHHHHTTCCCCCS---STTG-GGGGCCSEEEECSCGGGHHHHHHHHHHTTCCEEEE
T ss_pred CCceEE-EEe-CCHHHHHHHHHHcCCCcccc---CHHH-HhhcCCCEEEEECCchhHHHHHHHHHHCCCeEEEe
Confidence 678888 433 45666777777777432122 2222 34 57899998887666666778999999999974
No 137
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=20.06 E-value=2.8e+02 Score=30.11 Aligned_cols=76 Identities=14% Similarity=0.118 Sum_probs=48.1
Q ss_pred CCcEEEEEeCCCCHHHHHHHHHhcCCcEEEcC----------CCCCHHHHHhcccEEEEc--cCCC----C---ChHHHH
Q 003992 562 DGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQK----------GRDHADDSLHGYKVFINP--SISD----V---LCTATA 622 (781)
Q Consensus 562 p~i~LvIVG~Gp~~~~L~~~a~~lgL~V~FlG----------~v~~~e~ly~~ADVfVlP--S~~E----g---fGlviL 622 (781)
.+-++-|+|-|.--..+.+.++..|.+|.... .....++++..||++++. ...+ + ++-..+
T Consensus 118 ~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~l 197 (381)
T 3oet_A 118 RDRTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAARGDEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETLI 197 (381)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHTTCCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHHH
T ss_pred CCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCChHHhccCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHHH
Confidence 45678888888777777777777777755432 122445789999977653 3334 3 345567
Q ss_pred HHHHhCCcEEEeCCC
Q 003992 623 EALAMGKFVICADHP 637 (781)
Q Consensus 623 EAMA~G~PVVaSd~g 637 (781)
++|--|.-+|-+..|
T Consensus 198 ~~mk~gailIN~aRG 212 (381)
T 3oet_A 198 RRLKPGAILINACRG 212 (381)
T ss_dssp HHSCTTEEEEECSCG
T ss_pred hcCCCCcEEEECCCC
Confidence 777667666655443
Done!